format-version: 1.2 date: 21:01:2011 15:55 saved-by: Ceri auto-generated-by: OBO-Edit 2.0 synonymtypedef: PLURAL "PLURAL" default-namespace: zebrafish_anatomical_ontology CVS version: $Revision: 1.32 $ treat-xrefs-as-genus-differentia: CL part_of NCBITaxon:7955 treat-xrefs-as-genus-differentia: TAO part_of NCBITaxon:7955 treat-xrefs-as-genus-differentia: CARO part_of NCBITaxon:7955 [Term] id: ZFA:0000000 name: Brachet's cleft namespace: zebrafish_anatomy def: "The visible division between epiblast and hypoblast in the gastrula." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000000 xref: ZFIN:ZDB-ANAT-010921-404 is_a: ZFA:0001105 ! embryonic structure relationship: end ZFS:0000024 ! Segmentation:5-9 somites relationship: start ZFS:0000020 ! Gastrula:75%-epiboly [Term] id: ZFA:0000001 name: Kupffer's vesicle namespace: zebrafish_anatomy def: "Small but distinctive epithelial sac containing fluid, located midventrally posterior to the yolk cell or its extension, and transiently present during most of the segmentation period. Kupffer's vesicle has been compared to the mouse embryonic node." [ZFIN:ZDB-PUB-050328-4, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000001 xref: ZFIN:ZDB-ANAT-010921-406 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0000023 ! forerunner cell group relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0000077 ! tail bud relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0000003 name: adaxial cell namespace: zebrafish_anatomy synonym: "adaxial cells" EXACT PLURAL [] xref: TAO:0000003 xref: ZFIN:ZDB-ANAT-010921-408 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0000279 ! segmental plate relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0000004 name: anterior axial hypoblast namespace: zebrafish_anatomy synonym: "pre-polster" EXACT [ZFIN:ZDB-PUB-051019-5] xref: TAO:0000004 xref: ZFIN:ZDB-ANAT-010921-409 relationship: end ZFS:0000022 ! Gastrula:Bud relationship: part_of ZFA:0001378 ! axial hypoblast relationship: start ZFS:0000020 ! Gastrula:75%-epiboly [Term] id: ZFA:0000005 name: artery namespace: zebrafish_anatomy def: "Vessels that carry blood away from the heart." [ZFIN:curator] synonym: "arterial system" RELATED [] xref: TAO:0000005 xref: ZFIN:ZDB-ANAT-010921-411 is_a: ZFA:0005314 ! blood vessel relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001079 ! blood vasculature relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000006 name: ball namespace: zebrafish_anatomy def: "The anterior round region of the yolk cell present after the yolk extension forms during the segmentation period." [ZFIN:ZDB-PUB-961014-576] synonym: "yolk ball" EXACT [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000006 xref: ZFIN:ZDB-ANAT-010921-413 is_a: ZFA:0001308 ! organism subdivision relationship: end ZFS:0000036 ! Larval:Day 4 relationship: part_of ZFA:0000084 ! yolk relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000007 name: blood namespace: zebrafish_anatomy def: "A complex mixture of cells suspended in a liquid matrix that delivers nutrients to cells and removes wastes." [ZFIN:curator] xref: TAO:0000007 xref: ZFIN:ZDB-ANAT-010921-414 is_a: ZFA:0001487 ! portion of organism substance relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005023 ! hematopoietic system relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000008 name: brain namespace: zebrafish_anatomy alt_id: ZFA:0001661 def: "Cavitated compound organ which is comprised of gray and white matter and surrounds the cerebral ventricular system." [ZFIN:curator] synonym: "brain structure" RELATED [] xref: TAO:0000008 xref: ZFIN:ZDB-ANAT-010921-415 is_a: ZFA:0001490 ! cavitated compound organ relationship: develops_from ZFA:0001135 ! neural tube relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000012 ! central nervous system relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000009 name: cardiac ventricle namespace: zebrafish_anatomy def: "Cavitated compound organ that receives blood flow from the atrium and delivers blood to the body via the aorta. Valves are present to direct flow. There are only two chambers present in the fish heart." [ZFIN:ZDB-PUB-020122-4] synonym: "ventricle" EXACT [] xref: TAO:0000009 xref: ZFIN:ZDB-ANAT-010921-416 is_a: ZFA:0001490 ! cavitated compound organ relationship: develops_from ZFA:0001719 ! presumptive cardiac ventricle heart tube relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000114 ! heart relationship: start ZFS:0000032 ! Pharyngula:High-pec [Term] id: ZFA:0000010 name: cardiovascular system namespace: zebrafish_anatomy xref: TAO:0000010 xref: ZFIN:ZDB-ANAT-010921-417 is_a: ZFA:0001439 ! anatomical system relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000011 name: caudal artery namespace: zebrafish_anatomy def: "Extension of the dorsal aorta in the tail." [ZFIN:ZDB-PUB-961014-576] synonym: "CA" EXACT [] xref: TAO:0000011 xref: ZFIN:ZDB-ANAT-010921-418 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005037 ! post-vent vasculature relationship: part_of ZFA:0005295 ! axial blood vessel relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000012 name: central nervous system namespace: zebrafish_anatomy def: "The brain and spinal cord." [ZFIN:ZDB-PUB-961014-576] synonym: "cns" EXACT [] xref: TAO:0000012 xref: ZFIN:ZDB-ANAT-010921-420 is_a: ZFA:0000396 ! nervous system relationship: develops_from ZFA:0000063 ! presumptive neural plate relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0000013 name: cranial ganglion namespace: zebrafish_anatomy def: "Ganglion which is located in the head." [ZFIN:curator] synonym: "cranial ganglia" EXACT PLURAL [] synonym: "presumptive cranial ganglia" RELATED [] xref: TAO:0000013 xref: ZFIN:ZDB-ANAT-010921-422 is_a: ZFA:0000190 ! ganglion relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0000014 name: dorsal aorta namespace: zebrafish_anatomy def: "Principal unpaired, median artery of the trunk, leading from the paired roots (radices) of the dorsal aorta to the caudal artery." [ZFIN:ZDB-PUB-961014-576] synonym: "DA" EXACT [] synonym: "dorsal aortic root" EXACT [] xref: TAO:0000014 xref: ZFIN:ZDB-ANAT-010921-424 is_a: ZFA:0000005 ! artery relationship: develops_from ZFA:0005077 ! vascular cord relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005024 ! trunk vasculature relationship: part_of ZFA:0005295 ! axial blood vessel relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000015 name: anatomical set namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-061101-1 is_obsolete: true [Term] id: ZFA:0000016 name: ectoderm namespace: zebrafish_anatomy def: "The outer layer of the embryo derived from the epiblast. The definitive ectoderm will give rise to such tissues as epidermis, the central nervous system, neural crest, and sensory placode" [http:http\://zfin.org/zf_info/zfbook/stages/gast.html] xref: TAO:0000016 xref: ZFIN:ZDB-ANAT-010921-427 is_a: ZFA:0001122 ! primary germ layer relationship: develops_from ZFA:0000018 ! epiblast relationship: end ZFS:0000038 ! Larval:Day 6 relationship: start ZFS:0000020 ! Gastrula:75%-epiboly [Term] id: ZFA:0000017 name: endoderm namespace: zebrafish_anatomy xref: TAO:0000017 xref: ZFIN:ZDB-ANAT-010921-428 is_a: ZFA:0001122 ! primary germ layer relationship: develops_from ZFA:0000416 ! presumptive endoderm relationship: end ZFS:0000035 ! Larval:Protruding-mouth relationship: start ZFS:0000020 ! Gastrula:75%-epiboly [Term] id: ZFA:0000018 name: epiblast namespace: zebrafish_anatomy def: "The outer of the two layers of the blastoderm that form during gastrulation, corresponding to primitive ectoderm during gastrulation and to the definitive ectoderm after gastrulation." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000018 xref: ZFIN:ZDB-ANAT-010921-429 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0000711 ! DEL relationship: end ZFS:0000022 ! Gastrula:Bud relationship: part_of ZFA:0000111 ! germ ring relationship: start ZFS:0000018 ! Gastrula:Germ-ring [Term] id: ZFA:0000019 name: epiphysis namespace: zebrafish_anatomy def: "A circumscribed swelling, includes the pineal primordium that appears late in the segmentation period in the dorsal midline of the diencephalon." [ZFIN:ZDB-PUB-961014-576] synonym: "corpus pineale" EXACT [] synonym: "pineal gland" EXACT [] synonym: "pineal organ" EXACT [] xref: TAO:0000019 xref: ZFIN:ZDB-ANAT-010921-430 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001127 ! visual system relationship: part_of ZFA:0001158 ! endocrine system relationship: part_of ZFA:0001359 ! pineal complex relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000020 name: extraembryonic structure namespace: zebrafish_anatomy def: "Anatomical structure that is contiguous with the embryo and is comprised of portions of tissue or cells that will not contribute to the embryo." [ZFIN:curator] synonym: "extraembryonic structures" EXACT PLURAL [] xref: CARO:0000042 xref: TAO:0000020 xref: ZFIN:ZDB-ANAT-010921-431 is_a: ZFA:0000037 ! anatomical structure relationship: end ZFS:0000032 ! Pharyngula:High-pec relationship: start ZFS:0000001 ! Zygote:1-cell [Term] id: ZFA:0000022 name: floor plate namespace: zebrafish_anatomy def: "Multi-tissue structure that is the ventral-most aspect of the developing neural tube. The floor plate is a specialized glial structure that spans the rostral-caudal axis from the midbrain to the tail regions." [ZFIN:curator] comment: The floor plate cells are a row of cells along the a-p axis ~3 cells wide that make up the ventral floor of the early spinal cord. Floor plate cells are prominent rectangular cells with a triangular cross section with one cell in the middle that straddles the ventral midline and usually one cell lateral to the middle cell on both sides. 14hpf. synonym: "flexural organ" EXACT [] synonym: "floorplate" EXACT [] synonym: "fp" EXACT [] xref: TAO:0000022 xref: ZFIN:ZDB-ANAT-010921-433 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001218 ! presumptive floor plate relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000012 ! central nervous system relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000023 name: forerunner cell group namespace: zebrafish_anatomy def: "A group of cells that migrate at the leading edge of shield during gastrulation but do not involute. At the end of gastrulation, forerunner cells migrate deep into the embryo and organize to form Kupffer's vesicle." [ZFIN:ZDB-PUB-970107-2] synonym: "DFCs" EXACT PLURAL [] synonym: "dorsal forerunner cells" EXACT PLURAL [] synonym: "forerunner cells" EXACT PLURAL [] xref: TAO:0000023 xref: ZFIN:ZDB-ANAT-010921-434 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0001126 ! noninvoluting endocytic marginal cell cluster relationship: end ZFS:0000023 ! Segmentation:1-4 somites relationship: start ZFS:0000017 ! Gastrula:50%-epiboly [Term] id: ZFA:0000024 name: retinal ganglion cell layer namespace: zebrafish_anatomy synonym: "ganglion cell layer" EXACT [] xref: TAO:0000024 xref: ZFIN:ZDB-ANAT-010921-435 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000046 ! retinal neural layer relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0000026 name: hatching gland namespace: zebrafish_anatomy def: "A transversely oriented set of cells located deep to the EVL on the pericardial membrane, especially prominent during pharyngula period because of the brightly refractile cytoplasmic granules (containing hatching enzymes) of the principal cells of the gland." [ZFIN:ZDB-PUB-961014-576] synonym: "hgg" EXACT [] xref: TAO:0000026 xref: ZFIN:ZDB-ANAT-010921-437 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0000058 ! polster relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000027 name: paired fin skeleton namespace: zebrafish_anatomy synonym: "appendicular skeleton" EXACT [] xref: TAO:0000027 xref: ZFIN:ZDB-ANAT-060331-1 is_a: ZFA:0000434 ! skeletal system relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000028 name: heart primordium namespace: zebrafish_anatomy def: "Bilateral groups of cells consisting of three rows: one row of endocardial precursors medially and two rows of myocardial precursors laterally. The two populations fuse at the midline between 21 and 26 somites to form the heart rudiment or cone." [ZFIN:ZDB-PUB-010219-2] synonym: "heart primordia" EXACT PLURAL [] xref: TAO:0000028 xref: ZFIN:ZDB-ANAT-010921-439 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0001065 ! lateral mesoderm relationship: end ZFS:0000027 ! Segmentation:20-25 somites relationship: part_of ZFA:0000010 ! cardiovascular system relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000029 name: hindbrain namespace: zebrafish_anatomy def: "The most posterior of the three principal regions of the brain. In mammals and birds the hindbrain is divided into a rostral metencephalon and a caudal myelencephalon. In zebrafish, with the exception of the cerebellum, the ventral remainder of the metencephalon can be separated only arbitrarily from the more caudal myelencephalic portion of the medulla oblongata and thus these are not distinguished here. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] synonym: "rhombencephalon" EXACT [] xref: TAO:0000029 xref: ZFIN:ZDB-ANAT-010921-440 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0007043 ! hindbrain neural tube relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000008 ! brain relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000030 name: macula utricle namespace: zebrafish_anatomy def: "Portion of tissue that is a patch of thickened, pseudostratified epithelium in the inner ear, consisting of regular arrays of sensory hair cells interspersed with supporting cells. The macula utricle senses linear acceleration and gravity. The macula utricle covers most of the floor of the utricle." [ZFIN:curator, ZFIN:ZDB-PUB-010912-7] synonym: "maculae utricle" EXACT PLURAL [] xref: TAO:0000030 xref: ZFIN:ZDB-ANAT-010921-441 is_a: ZFA:0000386 ! macula relationship: develops_from ZFA:0000168 ! anterior macula relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000700 ! utricle relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000031 name: hypochord namespace: zebrafish_anatomy def: "Portion of tissue that arises from the arise from the lateral edges of the shield and is located immediately ventral to the notochord. The hypochord is thought to play a role in positioning the dorsal aorta. Unlike in frogs and axolotl, the hypochord does not appear to be endodermally derived." [ZFIN:ZDB-PUB-000621-3, ZFIN:ZDB-PUB-060807-3] xref: TAO:0000031 xref: ZFIN:ZDB-ANAT-010921-442 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0001217 ! presumptive hypochord relationship: end ZFS:0000035 ! Larval:Protruding-mouth relationship: part_of ZFA:0000017 ! endoderm relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000032 name: hypothalamus namespace: zebrafish_anatomy def: "Multi-tissue structure which is the largest portion of diencephalon and is ventrally located. The hypothalamus arises near the end of the segmentation period and the embryonic hypothalamic region gives rise to the neurohypophysis and other diencephalic nuclei." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000032 xref: ZFIN:ZDB-ANAT-010921-443 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000101 ! diencephalon relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000033 name: intermediate cell mass of mesoderm namespace: zebrafish_anatomy synonym: "ICM" EXACT [] synonym: "intermediate cell mass of Oellacher" EXACT [] synonym: "posterior intermediate cell mass" EXACT [] xref: TAO:0000033 xref: ZFIN:ZDB-ANAT-010921-444 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000121 ! lateral plate mesoderm relationship: develops_from ZFA:0001201 ! ventral lateral mesoderm relationship: end ZFS:0000033 ! Hatching:Long-pec relationship: part_of ZFA:0005023 ! hematopoietic system relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0000034 name: lateral line system namespace: zebrafish_anatomy def: "A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator] synonym: "ll" EXACT [] xref: TAO:0000034 xref: ZFIN:ZDB-ANAT-010921-445 is_a: ZFA:0000282 ! sensory system relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000142 ! peripheral nervous system relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000035 name: lens namespace: zebrafish_anatomy def: "Portion of tissue that is a transparent, biconvex structure located in the eye through which light is focused." [http:http\://encyclopedia.thefreedictionary.com/Lens+(anatomy, ZFIN:curator] synonym: "lenses" EXACT PLURAL [] xref: TAO:0000035 xref: ZFIN:ZDB-ANAT-010921-447 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0001679 ! lens vesicle relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000107 ! eye relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0000036 name: liver and biliary system namespace: zebrafish_anatomy xref: TAO:0000036 xref: ZFIN:ZDB-ANAT-010921-449 is_a: ZFA:0001439 ! anatomical system relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000037 name: anatomical structure namespace: zebrafish_anatomy def: "Zebrafish anatomical entity that has inherent 3D shape and is generated by coordinated expression of the organism's own genome." [ZFIN:curator] synonym: "anatomical structures" EXACT PLURAL [] xref: CARO:0000003 xref: TAO:0000037 xref: ZFIN:ZDB-ANAT-061101-2 is_a: ZFA:0100000 ! zebrafish anatomical entity relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000001 ! Zygote:1-cell [Term] id: ZFA:0000038 name: margin namespace: zebrafish_anatomy xref: TAO:0000038 xref: ZFIN:ZDB-ANAT-010921-451 is_a: ZFA:0001105 ! embryonic structure relationship: end ZFS:0000022 ! Gastrula:Bud relationship: start ZFS:0000016 ! Blastula:30%-epiboly [Term] id: ZFA:0000039 name: median axial vein namespace: zebrafish_anatomy xref: TAO:0000039 xref: ZFIN:ZDB-ANAT-010921-452 is_a: ZFA:0000082 ! vein relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000040 name: median fin fold namespace: zebrafish_anatomy synonym: "median fin" EXACT [] xref: TAO:0000040 xref: ZFIN:ZDB-ANAT-010921-453 is_a: ZFA:0000292 ! surface structure relationship: end ZFS:0000037 ! Larval:Day 5 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000041 name: mesoderm namespace: zebrafish_anatomy xref: TAO:0000041 xref: ZFIN:ZDB-ANAT-010921-454 is_a: ZFA:0001122 ! primary germ layer relationship: develops_from ZFA:0001377 ! presumptive mesoderm relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000020 ! Gastrula:75%-epiboly [Term] id: ZFA:0000042 name: midbrain hindbrain boundary namespace: zebrafish_anatomy synonym: "isthmus" EXACT [] synonym: "mhb" EXACT [] synonym: "midbrain-hindbrain boundary" EXACT [] xref: TAO:0000042 xref: ZFIN:ZDB-ANAT-010921-455 is_a: ZFA:0001689 ! anatomical line relationship: develops_from ZFA:0007047 ! midbrain hindbrain boundary neural tube relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000008 ! brain relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0000043 name: muscle pioneer somite 1 namespace: zebrafish_anatomy synonym: "muscle pioneers somite 1" EXACT PLURAL [] xref: TAO:0000043 xref: ZFIN:ZDB-ANAT-010921-456 is_a: ZFA:0001086 ! muscle pioneer relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000963 ! slow muscle cell somite 1 relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000044 name: myotome somite 14 namespace: zebrafish_anatomy def: "Portion of the somite giving rise to body wall muscle masses." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000044 xref: ZFIN:ZDB-ANAT-010921-457 is_a: ZFA:0001056 ! myotome relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000726 ! somite 14 relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0000045 name: neural crest namespace: zebrafish_anatomy def: "A cell population arising from the dorsolateral aspect of the central nervous system primordium during the segmentation period, and later migrating along stereotyped pathways to give rise to a diverse and well-defined set of cell types including pigment cells, peripheral neurons and glia, and head cartilage." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000045 xref: ZFIN:ZDB-ANAT-010921-458 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0000046 name: retinal neural layer namespace: zebrafish_anatomy synonym: "neural retina" EXACT [] synonym: "neuroretina" EXACT [] xref: TAO:0000046 xref: ZFIN:ZDB-ANAT-010921-459 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0001071 ! presumptive neural retina relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000152 ! retina relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0000047 name: peripheral olfactory organ namespace: zebrafish_anatomy synonym: "nasal sac" EXACT [] synonym: "nose" RELATED [] xref: TAO:0000047 xref: ZFIN:ZDB-ANAT-010921-463 is_a: ZFA:0001490 ! cavitated compound organ relationship: develops_from ZFA:0000048 ! olfactory placode relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001149 ! olfactory system relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0000048 name: olfactory placode namespace: zebrafish_anatomy def: "Neurogenic placode that gives rise to the olfactory neurons that which convey odor information to the CNS." [ZFIN:curator] synonym: "olfactory placodes" EXACT PLURAL [] xref: TAO:0000048 xref: ZFIN:ZDB-ANAT-010921-464 is_a: ZFA:0001309 ! neurogenic placode relationship: develops_from ZFA:0007062 ! olfactory field relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0001149 ! olfactory system relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000049 name: optic recess namespace: zebrafish_anatomy synonym: "optic recesses" EXACT PLURAL [] xref: TAO:0000049 xref: ZFIN:ZDB-ANAT-010921-465 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000079 ! telencephalon relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000050 name: optic vesicle namespace: zebrafish_anatomy def: "Portion of tissue that is comprised of neuroepithelium which has pinched off from the anterior neural keel and will form the optic cup." [ZFIN:curator] synonym: "optic vesicles" EXACT PLURAL [] xref: TAO:0000050 xref: ZFIN:ZDB-ANAT-010921-466 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000570 ! optic primordium relationship: end ZFS:0000027 ! Segmentation:20-25 somites relationship: part_of ZFA:0001678 ! immature eye relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000051 name: otic vesicle namespace: zebrafish_anatomy def: "Epithelial sac present beside the fifth rhombomere; forms the semicircular canals dorsally and the otolith organs ventrally, and houses the acoustico-vestibular sensory epithelia (maculae) of hair cells. (Also see Anatomical Atlas entry for ear by T. Whitfield.)" [ZFIN:ZDB-PUB-961014-576] synonym: "otic capsule" RELATED [] synonym: "otocyst" EXACT [] synonym: "ov" EXACT [] xref: TAO:0000051 xref: ZFIN:ZDB-ANAT-010921-468 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0000138 ! otic placode relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0000052 name: dorsal actinotrichium namespace: zebrafish_anatomy def: "Actinotrichium which is part of the dorsal fin fold." [ZFIN:curator] synonym: "dorsal actinotrichia" EXACT PLURAL [] xref: TAO:0000052 xref: ZFIN:ZDB-ANAT-060131-1 is_a: ZFA:0000089 ! fin fold actinotrichium relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000102 ! dorsal fin fold relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000053 name: presumptive segmental plate namespace: zebrafish_anatomy synonym: "presumptive segmental plates" EXACT PLURAL [] xref: TAO:0000053 xref: ZFIN:ZDB-ANAT-010921-470 is_a: ZFA:0001105 ! embryonic structure relationship: end ZFS:0000022 ! Gastrula:Bud relationship: part_of ZFA:0000041 ! mesoderm relationship: start ZFS:0000020 ! Gastrula:75%-epiboly [Term] id: ZFA:0000054 name: pericardium namespace: zebrafish_anatomy synonym: "pericardial sac" EXACT [] xref: TAO:0000054 xref: ZFIN:ZDB-ANAT-010921-471 is_a: ZFA:0005425 ! serous membrane relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000010 ! cardiovascular system relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000056 name: pharynx namespace: zebrafish_anatomy def: "Swollen region of the anterior foregut, posterior to the mouth and anterior to the liver; its walls form the jaws and gills." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000056 xref: ZFIN:ZDB-ANAT-010921-473 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000339 ! digestive system relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000058 name: polster namespace: zebrafish_anatomy def: "The hatching gland rudiment at the time it underlies the forebrain during the early segmentation period." [ZFIN:ZDB-PUB-961014-576] synonym: "pillow" EXACT [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000058 xref: ZFIN:ZDB-ANAT-010921-475 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0000004 ! anterior axial hypoblast relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0000060 ! prechordal plate relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0000059 name: postoptic commissure namespace: zebrafish_anatomy synonym: "POC" EXACT [] synonym: "post optic commissure" EXACT [] synonym: "post-optic commissure" EXACT [] xref: TAO:0000059 xref: ZFIN:ZDB-ANAT-010921-476 is_a: ZFA:0000338 ! diencephalic white matter relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000060 name: prechordal plate namespace: zebrafish_anatomy def: "Axial hypoblast located anterior to the chorda mesoderm; the polster is its most anterior region." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000060 xref: ZFIN:ZDB-ANAT-010921-477 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0001204 ! axial mesoderm relationship: start ZFS:0000020 ! Gastrula:75%-epiboly [Term] id: ZFA:0000062 name: presumptive forebrain namespace: zebrafish_anatomy synonym: "presumptive prosencephalon" EXACT [] xref: TAO:0000062 xref: ZFIN:ZDB-ANAT-010921-479 is_a: ZFA:0001105 ! embryonic structure relationship: end ZFS:0000020 ! Gastrula:75%-epiboly relationship: part_of ZFA:0000146 ! presumptive brain relationship: part_of ZFA:0007014 ! anterior presumptive neural plate relationship: start ZFS:0000019 ! Gastrula:Shield [Term] id: ZFA:0000063 name: presumptive neural plate namespace: zebrafish_anatomy alt_id: ZFA:0000061 def: "Region of the gastrula which gives rise to the neural plate." [ZFIN:curator] synonym: "neurectoderm" RELATED [] synonym: "presumptive central nervous system" EXACT [] synonym: "prospective neuroectoderm" EXACT [] synonym: "prospective vegetal ectoderm" EXACT [] xref: TAO:0000063 xref: ZFIN:ZDB-ANAT-010921-480 is_a: ZFA:0001116 ! presumptive structure relationship: end ZFS:0000021 ! Gastrula:90%-epiboly relationship: start ZFS:0000014 ! Blastula:Sphere [Term] id: ZFA:0000064 name: presumptive retinal pigmented epithelium namespace: zebrafish_anatomy def: "Portion of tissue that is the outer layer of the optic cup and will become the retinal pigmented epithelium." [ZFIN:curator] synonym: "outer layer optic cup" EXACT [] synonym: "presumptive pigmented epithelia" EXACT PLURAL [] xref: TAO:0000064 xref: ZFIN:ZDB-ANAT-010921-481 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0001202 ! optic cup relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000066 name: proctodeum namespace: zebrafish_anatomy def: "An inward fold on the surface of the embryonic ectoderm that develops into part of the anal passage." [ZFIN:curator] synonym: "anus" RELATED [] xref: TAO:0000066 xref: ZFIN:ZDB-ANAT-010921-484 is_a: ZFA:0000292 ! surface structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000112 ! gut relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000067 name: pronephric mesoderm namespace: zebrafish_anatomy xref: TAO:0000067 xref: ZFIN:ZDB-ANAT-010921-485 is_a: ZFA:0000041 ! mesoderm relationship: end ZFS:0000024 ! Segmentation:5-9 somites relationship: part_of ZFA:0001206 ! intermediate mesoderm relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0000068 name: proneural cluster namespace: zebrafish_anatomy synonym: "proneural clusters" EXACT PLURAL [] xref: TAO:0000068 xref: ZFIN:ZDB-ANAT-010921-486 relationship: end ZFS:0000024 ! Segmentation:5-9 somites relationship: part_of ZFA:0000132 ! neural plate relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0000069 name: rhombomere 6 namespace: zebrafish_anatomy def: "Hindbrain segment or neuromere." [ZFIN:ZDB-PUB-961014-576] synonym: "r6" EXACT [] xref: TAO:0000069 xref: ZFIN:ZDB-ANAT-010921-487 is_a: ZFA:0001064 ! rhombomere relationship: develops_from ZFA:0001210 ! presumptive rhombomere 6 relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000070 name: sensory axons peripheral namespace: zebrafish_anatomy xref: TAO:0000070 xref: ZFIN:ZDB-ANAT-010921-488 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000282 ! sensory system relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000071 name: shield namespace: zebrafish_anatomy synonym: "organizer" EXACT [] synonym: "Spemann Mangold organizer" EXACT [] synonym: "Spemann's organizer" EXACT [] xref: TAO:0000071 xref: ZFIN:ZDB-ANAT-010921-489 is_a: ZFA:0001105 ! embryonic structure relationship: end ZFS:0000019 ! Gastrula:Shield relationship: part_of ZFA:0000111 ! germ ring relationship: start ZFS:0000019 ! Gastrula:Shield [Term] id: ZFA:0000072 name: somite 1 namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000072 xref: ZFIN:ZDB-ANAT-010921-490 is_a: ZFA:0000155 ! somite relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0000073 name: somite 5 namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000073 xref: ZFIN:ZDB-ANAT-010921-492 is_a: ZFA:0000155 ! somite relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000074 name: somite 26 namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000074 xref: ZFIN:ZDB-ANAT-010921-493 is_a: ZFA:0000155 ! somite relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000075 name: spinal cord namespace: zebrafish_anatomy alt_id: ZFA:0001664 synonym: "spinal cord structure" RELATED [] xref: TAO:0000075 xref: ZFIN:ZDB-ANAT-010921-494 is_a: ZFA:0001490 ! cavitated compound organ relationship: develops_from ZFA:0007042 ! spinal cord neural tube relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000012 ! central nervous system relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000076 name: swim bladder namespace: zebrafish_anatomy def: "The swim bladder is a double-chambered organ located in the coelom and used to maintain buoyancy and may function as an acoustic resonator. The zebrafish does not appear to have a gas gland, but it is not yet clear if there are gas producing cells distributed more widely." [ZFIN:ZDB-PUB-060306-11] synonym: "gas bladder" EXACT [] xref: TAO:0000076 xref: ZFIN:ZDB-ANAT-010921-495 is_a: ZFA:0001490 ! cavitated compound organ relationship: develops_from ZFA:0005335 ! swim bladder bud relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001438 ! coelom relationship: start ZFS:0000034 ! Hatching:Pec-fin [Term] id: ZFA:0000077 name: tail bud namespace: zebrafish_anatomy synonym: "tail bud mesenchyme " RELATED [] synonym: "tailbud" EXACT [] xref: TAO:0000077 xref: ZFIN:ZDB-ANAT-010921-496 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0000038 ! margin relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0000078 name: ventral actinotrichium namespace: zebrafish_anatomy def: "Actinotrichium which is part of the ventral fin fold." [ZFIN:curator] synonym: "ventral actinotrichia" EXACT PLURAL [] xref: TAO:0000078 xref: ZFIN:ZDB-ANAT-060131-2 is_a: ZFA:0000089 ! fin fold actinotrichium relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001069 ! ventral fin fold relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000079 name: telencephalon namespace: zebrafish_anatomy def: "The anterior and dorsal forebrain neuromere. In ray-finned fishes and most pronounced in teleosts the roof plate of the embryonic telencephalon extends laterally with the effect that the paired alar plates forming the hemispheric walls roll out lateroventrally in a process called eversion. This is unlike the development in other vertebrate groups. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209] xref: TAO:0000079 xref: ZFIN:ZDB-ANAT-010921-498 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0000571 ! presumptive telencephalon relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000109 ! forebrain relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000080 name: trigeminal neural crest namespace: zebrafish_anatomy def: "Cranial neural crest which gives rise to the trigeminal ganglion." [ZFIN:curator] xref: TAO:0000080 xref: ZFIN:ZDB-ANAT-010921-499 is_a: ZFA:0001194 ! cranial neural crest relationship: end ZFS:0000028 ! Segmentation:26+ somites relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0000081 name: trunk mesenchyme namespace: zebrafish_anatomy xref: TAO:0000081 xref: ZFIN:ZDB-ANAT-010921-500 is_a: ZFA:0000393 ! mesenchyme relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0000082 name: vein namespace: zebrafish_anatomy def: "Vessels that carry blood to the heart." [ZFIN:Curator] synonym: "venous system" RELATED [] xref: TAO:0000082 xref: ZFIN:ZDB-ANAT-010921-501 is_a: ZFA:0005314 ! blood vessel relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001079 ! blood vasculature relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000083 name: ventral mesoderm namespace: zebrafish_anatomy xref: TAO:0000083 xref: ZFIN:ZDB-ANAT-010921-502 is_a: ZFA:0000041 ! mesoderm relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: start ZFS:0000020 ! Gastrula:75%-epiboly [Term] id: ZFA:0000084 name: yolk namespace: zebrafish_anatomy alt_id: ZFA:0009197 def: "Nutrient store for embryonic development in the form of semicrystalline phospholipoprotein and contained within yolk granules." [ZFIN:ZDB-PUB-961014-576] synonym: "yolk cell" EXACT [] xref: CL:0000428 xref: TAO:0000084 xref: ZFIN:ZDB-ANAT-010921-503 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000036 ! Larval:Day 4 relationship: start ZFS:0000001 ! Zygote:1-cell [Term] id: ZFA:0000085 name: apical ectodermal ridge pectoral fin bud namespace: zebrafish_anatomy alt_id: ZFA:0000736 def: "Apical ectodermal ridge that is part of the pectoral fin bud." [ZFIN:curator] synonym: "AER pectoral fin" EXACT [] synonym: "apical ectodermal ridge pectoral fin" EXACT [] synonym: "apical ectodermal ridge pectoral fin buds" EXACT PLURAL [] synonym: "apical ectodermal ridge pectoral fins" EXACT [] synonym: "apical fold pectoral fin" EXACT [] xref: TAO:0000085 xref: TAO:0000736 xref: ZFIN:ZDB-ANAT-010921-504 xref: ZFIN:ZDB-ANAT-020309-116 is_a: ZFA:0001702 ! apical ectodermal ridge relationship: end ZFS:0000032 ! Pharyngula:High-pec relationship: part_of ZFA:0000141 ! pectoral fin bud relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0000086 name: EVL namespace: zebrafish_anatomy def: "Outermost monolayer of cells surrounding the embryo that become very flattened in the blastula and give rise to the periderm. Sometimes used synonymously with periderm." [ZFIN:ZDB-PUB-961014-576] synonym: "enveloping layer" EXACT [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000086 xref: ZFIN:ZDB-ANAT-010921-505 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0001484 ! superficial blastomere relationship: end ZFS:0000021 ! Gastrula:90%-epiboly relationship: part_of ZFA:0001176 ! blastoderm relationship: start ZFS:0000016 ! Blastula:30%-epiboly [Term] id: ZFA:0000088 name: YSL namespace: zebrafish_anatomy def: "Peripheral layer of the yolk cell including nuclei and non-yolky cytoplasm." [ZFIN:ZDB-PUB-961014-576] synonym: "periblast" EXACT [ZFIN:ZDB-PUB-961014-576] synonym: "yolk syncytial layer" EXACT [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000088 xref: ZFIN:ZDB-ANAT-010921-508 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0000084 ! yolk relationship: develops_from ZFA:0000541 ! marginal blastomere relationship: end ZFS:0000037 ! Larval:Day 5 relationship: start ZFS:0000011 ! Blastula:1k-cell [Term] id: ZFA:0000089 name: fin fold actinotrichium namespace: zebrafish_anatomy def: "Portion of tissue which is a slender, horny, flexible, unsegmented fibril, which strengthens the embryonic fin fold. Actinotrichia are translucent, exhibit birefringence (double refraction) and are composed of the scleroprotein elastoidine." [http:www.briancoad.com/Dictionary/A.htm] synonym: "fin fold actinotrichia" EXACT PLURAL [] xref: TAO:0000089 xref: ZFIN:ZDB-ANAT-060131-3 is_a: ZFA:0005435 ! actinotrichium relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000040 ! median fin fold relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000090 name: apical ectodermal ridge dorsal fin namespace: zebrafish_anatomy def: "Apical ectodermal ridge that is part of the dorsal fin." [ZFIN:curator] xref: TAO:0000090 xref: ZFIN:ZDB-ANAT-010921-511 is_a: ZFA:0001702 ! apical ectodermal ridge relationship: end ZFS:0000035 ! Larval:Protruding-mouth relationship: part_of ZFA:0001173 ! dorsal fin relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0000091 name: axial chorda mesoderm namespace: zebrafish_anatomy alt_id: ZFA:0001219 synonym: "chordamesoderm" EXACT [] synonym: "presumptive notochord" EXACT [] xref: TAO:0000091 xref: TAO:0001219 xref: ZFIN:ZDB-ANAT-010921-512 is_a: ZFA:0001116 ! presumptive structure relationship: end ZFS:0000022 ! Gastrula:Bud relationship: part_of ZFA:0001204 ! axial mesoderm relationship: start ZFS:0000020 ! Gastrula:75%-epiboly [Term] id: ZFA:0000092 name: axis namespace: zebrafish_anatomy synonym: "midline" EXACT [] xref: TAO:0000092 xref: ZFIN:ZDB-ANAT-010921-513 is_a: ZFA:0001308 ! organism subdivision relationship: end ZFS:0000024 ! Segmentation:5-9 somites relationship: start ZFS:0000017 ! Gastrula:50%-epiboly [Term] id: ZFA:0000093 name: blastomere namespace: zebrafish_anatomy def: "Cell that arises during cleavage and is partially cleaved, and located at the blastodisc margin prior to collectively forming the yolk syncytial layer (YSL) in the midblastula." [ZFIN:ZDB-PUB-961014-576] synonym: "blastomeres" EXACT PLURAL [] xref: TAO:0000093 xref: ZFIN:ZDB-ANAT-010921-514 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000015 ! Blastula:Dome relationship: part_of ZFA:0001175 ! blastodisc relationship: start ZFS:0000001 ! Zygote:1-cell [Term] id: ZFA:0000094 name: blood island namespace: zebrafish_anatomy def: "Nests of developing blood cells arising late in the segmentation period from the intermediate mass, and located in the anterior-ventral tail, just posterior to the yolk extension." [ZFIN:ZDB-PUB-961014-576] synonym: "blood islands" EXACT PLURAL [] synonym: "caudal hematopoietic tissue" EXACT [] synonym: "posterior blood island" EXACT [] synonym: "posterior ICM" EXACT [] xref: TAO:0000094 xref: ZFIN:ZDB-ANAT-010921-515 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0000033 ! intermediate cell mass of mesoderm relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000095 name: pharyngeal arch 3-7 skeleton namespace: zebrafish_anatomy def: "Skeletal and cartilaginous elements of the gill arches; the last five of the set of seven pharyngeal arches; the numbering system can be confusing; generally branchial arch #1 is the first gill arch, or the third pharyngeal arch, but some authors do not follow this convention." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000095 xref: ZFIN:ZDB-ANAT-010921-516 is_a: ZFA:0001216 ! splanchnocranium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001613 ! pharyngeal arch 3-7 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000096 name: cardinal system namespace: zebrafish_anatomy xref: TAO:0000096 xref: ZFIN:ZDB-ANAT-010921-517 is_a: ZFA:0001079 ! blood vasculature relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000097 name: carotid artery namespace: zebrafish_anatomy def: "Artery originating at the junction of the first two aortic arches and supplying the anterior brain." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000097 xref: ZFIN:ZDB-ANAT-010921-518 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000098 name: proliferative region namespace: zebrafish_anatomy def: "Anatomical cluster which consists of rapidly dividing cells." [ZFIN:curator] synonym: "cell cycle" RELATED [] synonym: "cell division" RELATED [] synonym: "proliferation" RELATED [] xref: TAO:0000098 xref: ZFIN:ZDB-ANAT-010921-520 is_a: ZFA:0001478 ! anatomical cluster relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000012 ! Blastula:High [Term] id: ZFA:0000099 name: brain vasculature namespace: zebrafish_anatomy xref: TAO:0000099 xref: ZFIN:ZDB-ANAT-060131-4 is_a: ZFA:0001267 ! cranial vasculature relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000100 name: cerebellum namespace: zebrafish_anatomy def: "Brain structure derived from the anterior hindbrain, and perhaps including posterior midbrain. The cerebellum plays a role in somatic motor function, the control of muscle tone, and balance. In zebrafish, with the exception of the cerebellum, the ventral remainder of the metencephalon can be separated only arbitrarily from the more caudal myelencephalic portion of the medulla oblongata and thus these are not distinguished here." [ISBN:3764351209] xref: TAO:0000100 xref: ZFIN:ZDB-ANAT-010921-522 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001442 ! upper rhombic lip relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000029 ! hindbrain relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000101 name: diencephalon namespace: zebrafish_anatomy def: "The more posterior and ventral of two forebrain neuromeres, the other being the telencephalon; major derivatives are the eye cups, the brain pretectal region, the thalamus, hypothalamus, and epithalamus (including the habenula and epiphysis)." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000101 xref: ZFIN:ZDB-ANAT-010921-524 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0000574 ! presumptive diencephalon relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000109 ! forebrain relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000102 name: dorsal fin fold namespace: zebrafish_anatomy xref: TAO:0000102 xref: ZFIN:ZDB-ANAT-010921-525 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000037 ! Larval:Day 5 relationship: part_of ZFA:0000040 ! median fin fold relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000103 name: embryo namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-010921-528 is_obsolete: true [Term] id: ZFA:0000104 name: lateral cells namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-010921-529 is_obsolete: true [Term] id: ZFA:0000105 name: epidermis namespace: zebrafish_anatomy def: "A cellular, multilayered epithelium derived from the ectoderm. Zebrafish epidermis consists only of living cells unlike terrestrial vertebrates in which dead, keratinized cells are present." [ZFIN:ZDB-PUB-040726-12] xref: TAO:0000105 xref: ZFIN:ZDB-ANAT-010921-530 is_a: ZFA:0001486 ! epithelium relationship: develops_from ZFA:0000016 ! ectoderm relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000368 ! integument relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000106 name: extension namespace: zebrafish_anatomy def: "The posterior elongated region of the yolk cell that forms during the segmentation period." [ZFIN:ZDB-PUB-961014-576] synonym: "yolk extension" EXACT [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000106 xref: ZFIN:ZDB-ANAT-010921-531 is_a: ZFA:0001308 ! organism subdivision relationship: end ZFS:0000036 ! Larval:Day 4 relationship: part_of ZFA:0000084 ! yolk relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000107 name: eye namespace: zebrafish_anatomy def: "Cavitated compound organ that consists of the neural retina, lens, cornea and iris and is the sensory apparatus of the visual system." [ZFIN:curator] synonym: "eyes" EXACT PLURAL [] xref: TAO:0000107 xref: ZFIN:ZDB-ANAT-010921-532 is_a: ZFA:0001490 ! cavitated compound organ relationship: develops_from ZFA:0001678 ! immature eye relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001114 ! head relationship: part_of ZFA:0001127 ! visual system relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000108 name: fin namespace: zebrafish_anatomy synonym: "fins" EXACT PLURAL [] xref: TAO:0000108 xref: ZFIN:ZDB-ANAT-010921-533 is_a: ZFA:0000292 ! surface structure relationship: develops_from ZFA:0001383 ! fin bud relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000109 name: forebrain namespace: zebrafish_anatomy def: "The most anterior region the brain including both the telencephalon and diencephalon." [ZFIN:ZDB-PUB-961014-576] synonym: "prosencephalon" EXACT [] xref: TAO:0000109 xref: ZFIN:ZDB-ANAT-010921-534 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0007041 ! forebrain neural tube relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000008 ! brain relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000110 name: fourth ventricle namespace: zebrafish_anatomy def: "Fluid-filled brain cavity." [ZFIN:ZDB-PUB-961014-576] synonym: "4th ventricle" EXACT [] synonym: "hindbrain ventricle" EXACT [] synonym: "rhombencephalic ventricle" EXACT [] synonym: "rhombencephalic vesicle" EXACT [] synonym: "ventricle IV" EXACT [] xref: TAO:0000110 xref: ZFIN:ZDB-ANAT-010921-535 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000029 ! hindbrain relationship: part_of ZFA:0001261 ! ventricular system relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0000111 name: germ ring namespace: zebrafish_anatomy xref: TAO:0000111 xref: ZFIN:ZDB-ANAT-010921-536 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0000038 ! margin relationship: end ZFS:0000022 ! Gastrula:Bud relationship: start ZFS:0000018 ! Gastrula:Germ-ring [Term] id: ZFA:0000112 name: gut namespace: zebrafish_anatomy def: "The alimentary or digestive tract, and associated organs." [ZFIN:curator] synonym: "alimentary canal" EXACT [] synonym: "enteric tract" EXACT [] synonym: "gut tube" EXACT [] xref: TAO:0000112 xref: ZFIN:ZDB-ANAT-010921-537 is_a: ZFA:0001512 ! anatomical group relationship: develops_from ZFA:0000017 ! endoderm relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000339 ! digestive system relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000113 name: head mesenchyme namespace: zebrafish_anatomy def: "Mesoderm that will give rise, along with cranial neural crest cells, to connective tissue, bone and musculature in the head. (Source: BioGlossary, www.Biology-Text.com)" [ZFIN:curator] xref: TAO:0000113 xref: ZFIN:ZDB-ANAT-010921-538 is_a: ZFA:0000393 ! mesenchyme relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0000114 name: heart namespace: zebrafish_anatomy def: "Blood pumping organ composed of four components: sinus venosus, atrium, cardiac ventricle and bulbus arteriosus." [ZFIN:curator] xref: TAO:0000114 xref: ZFIN:ZDB-ANAT-010921-539 is_a: ZFA:0001490 ! cavitated compound organ relationship: develops_from ZFA:0000360 ! heart tube relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000010 ! cardiovascular system relationship: part_of ZFA:0001438 ! coelom relationship: start ZFS:0000032 ! Pharyngula:High-pec [Term] id: ZFA:0000115 name: heart rudiment namespace: zebrafish_anatomy def: "The migrating myocardial precursors of the heart rudiment form a cone like structure between 19.5 hpf and 22 hpf, and eventually telescope out into the primitive heart tube at 24hpf." [ZFIN:ZDB-PUB-010219-2] synonym: "heart cone" EXACT [] synonym: "rudimentary heart" EXACT [] xref: TAO:0000115 xref: ZFIN:ZDB-ANAT-010921-540 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000028 ! heart primordium relationship: end ZFS:0000028 ! Segmentation:26+ somites relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000116 name: macula lagena namespace: zebrafish_anatomy def: "Portion of tissue that is a patch of thickened, pseudostratified epithelium in the inner ear, consisting of regular arrays of sensory hair cells interspersed with supporting cells. The macula lagena develops from the posterior macula. In juveniles the macula lagena lies in a vertical plane covering most of the medial wall of the lagena." [ZFIN:ZDB-PUB-010912-7, ZFIN:ZDB-PUB-020403-4] synonym: "maculae lagena" EXACT PLURAL [] xref: TAO:0000116 xref: ZFIN:ZDB-ANAT-010921-541 is_a: ZFA:0000386 ! macula relationship: develops_from ZFA:0000558 ! posterior macula relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000374 ! lagena relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000117 name: hypoblast namespace: zebrafish_anatomy def: "The inner of the two layers of the blastoderm that forms during gastrulation and give rise to the definitive mesoderm and endoderm." [ZFIN:ZDB-PUB-961014-576] synonym: "mesendoderm" EXACT [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000117 xref: ZFIN:ZDB-ANAT-010921-542 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0000711 ! DEL relationship: end ZFS:0000022 ! Gastrula:Bud relationship: part_of ZFA:0000111 ! germ ring relationship: start ZFS:0000018 ! Gastrula:Germ-ring [Term] id: ZFA:0000118 name: hypophysis namespace: zebrafish_anatomy def: "A compound organ which is an endocrine gland located ventral to the diencephalon and derived from mixed neuroectodermal and non neuroectodermal origin." [ZFIN:curator] synonym: "pituitary" EXACT [] xref: TAO:0000118 xref: ZFIN:ZDB-ANAT-010921-543 is_a: ZFA:0000496 ! compound organ relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000101 ! diencephalon relationship: part_of ZFA:0001158 ! endocrine system relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000119 name: retinal inner nuclear layer namespace: zebrafish_anatomy synonym: "inner nuclear layer" EXACT PLURAL [] synonym: "intermediate cell layer" EXACT [] xref: TAO:0000119 xref: ZFIN:ZDB-ANAT-010921-544 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000046 ! retinal neural layer relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0000120 name: lateral line ganglion namespace: zebrafish_anatomy synonym: "lateral line ganglia" EXACT PLURAL [] synonym: "llg" EXACT [] xref: TAO:0000120 xref: ZFIN:ZDB-ANAT-010921-546 is_a: ZFA:0000013 ! cranial ganglion relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000034 ! lateral line system relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000121 name: lateral plate mesoderm namespace: zebrafish_anatomy synonym: "lateral plate" EXACT [] xref: TAO:0000121 xref: ZFIN:ZDB-ANAT-010921-547 is_a: ZFA:0000041 ! mesoderm relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0000122 name: lens placode namespace: zebrafish_anatomy def: "Ectodermal primordium of the lens of the eye." [ZFIN:ZDB-PUB-961014-576] synonym: "lens placodes" EXACT PLURAL [] xref: TAO:0000122 xref: ZFIN:ZDB-ANAT-010921-548 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000026 ! Segmentation:14-19 somites relationship: part_of ZFA:0000016 ! ectoderm relationship: part_of ZFA:0001678 ! immature eye relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000123 name: liver namespace: zebrafish_anatomy xref: TAO:0000123 xref: ZFIN:ZDB-ANAT-010921-549 is_a: ZFA:0001491 ! solid compound organ relationship: develops_from ZFA:0000124 ! liver primordium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000036 ! liver and biliary system relationship: part_of ZFA:0000339 ! digestive system relationship: part_of ZFA:0001159 ! immune system relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0000124 name: liver primordium namespace: zebrafish_anatomy synonym: "liver bud" EXACT [] xref: TAO:0000124 xref: ZFIN:ZDB-ANAT-010921-550 is_a: ZFA:0001105 ! embryonic structure relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0000036 ! liver and biliary system relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000125 name: mandibular lateral line neuromast namespace: zebrafish_anatomy def: "Neuromast that is part of the mandibular lateral line. (Also see Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:ZDB-PUB-961014-576] synonym: "neuromast mandibular" EXACT [] synonym: "neuromasts mandibular" EXACT PLURAL [] xref: TAO:0000125 xref: ZFIN:ZDB-ANAT-010921-551 is_a: ZFA:0000243 ! neuromast relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000259 ! mandibular lateral line relationship: start ZFS:0000036 ! Larval:Day 4 [Term] id: ZFA:0000126 name: centrum namespace: zebrafish_anatomy def: "Centra are represented by mineralized, calcified, or ossified portions that surround the notochord. The autocentrum, present in Danio and all other living teleosts, is formed by direct ossification outside the elastica externa of the notochord (Arratia, 1999)." [ZFIN:curator] synonym: "autocentrum" EXACT [] xref: TAO:0000126 xref: ZFIN:ZDB-ANAT-060331-2 is_a: ZFA:0001591 ! endochondral bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001189 ! vertebra relationship: start ZFS:0000035 ! Larval:Protruding-mouth [Term] id: ZFA:0000127 name: mesenchyme condensations namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-010921-554 is_obsolete: true [Term] id: ZFA:0000128 name: midbrain namespace: zebrafish_anatomy def: "The brain region between the forebrain anteriorly and the hindbrain posteriorly, including the tectum dorsally and the midbrain tegmentum ventrally." [ZFIN:ZDB-PUB-961014-576] synonym: "mesencephalon" EXACT [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000128 xref: ZFIN:ZDB-ANAT-010921-555 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0007039 ! midbrain neural tube relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000008 ! brain relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000130 name: olfactory pit namespace: zebrafish_anatomy synonym: "nasal canal" EXACT [] synonym: "nasal cavity" EXACT [] synonym: "nasal pit" EXACT [] synonym: "olfactory cavity" EXACT [] xref: TAO:0000130 xref: ZFIN:ZDB-ANAT-010921-558 is_a: ZFA:0001643 ! anatomical space relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000047 ! peripheral olfactory organ relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0000131 name: neural keel namespace: zebrafish_anatomy def: "An intermediate stage (between the neural plate and neural rod) during the early segmentation period in the morphogenesis of the central nervous system primordium; the keel is roughly triangular shaped in cross section." [ZFIN:ZDB-PUB-961014-576] synonym: "presumptive central nervous system" RELATED [] xref: TAO:0000131 xref: ZFIN:ZDB-ANAT-010921-559 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000132 ! neural plate relationship: end ZFS:0000025 ! Segmentation:10-13 somites relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0000132 name: neural plate namespace: zebrafish_anatomy def: "The earliest recognizable dorsal ectodermal primordium of the central nervous system present near the end of gastrulation before infolding to form the neural keel; consists of a thickened pseudostratified epithelium." [ZFIN:ZDB-PUB-961014-576] synonym: "presumptive central nervous system" RELATED [] xref: TAO:0000132 xref: ZFIN:ZDB-ANAT-010921-560 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000063 ! presumptive neural plate relationship: end ZFS:0000024 ! Segmentation:5-9 somites relationship: start ZFS:0000020 ! Gastrula:75%-epiboly [Term] id: ZFA:0000133 name: neural rod namespace: zebrafish_anatomy def: "An intermediate stage in the development of the central nervous system present during the segmentation period; the neural rod is roughly cylindrical in shape, forms from the neural keel, and is not yet hollowed out into the neural tube." [ZFIN:ZDB-PUB-961014-576] synonym: "presumptive central nervous system" RELATED [] xref: TAO:0000133 xref: ZFIN:ZDB-ANAT-010921-561 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000131 ! neural keel relationship: end ZFS:0000026 ! Segmentation:14-19 somites relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000135 name: notochord namespace: zebrafish_anatomy def: "Rod-like principal supportive element of the embryo and larva, present in the midline just ventral to the neural tube, and differentiating during the segmentation period to form large vacuolated epithelial cells and a surrounding sheath of fibrous and elastic layers. Layering of the sheath may differ in structure, thickness and development among groups; in cypriniforms there are actually three very thin layers to the sheath. A functional, well developed notochord is present throughout life in certain basal fish groups but not in cypriniforms." [ZFIN:ZDB-PUB-961014-576] synonym: "notocord" EXACT [] xref: TAO:0000135 xref: ZFIN:ZDB-ANAT-010921-564 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000091 ! axial chorda mesoderm relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001414 ! occipital region relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0000136 name: otic lateral line neuromast namespace: zebrafish_anatomy def: "Neuromast that is part of the otic lateral line. (Also see Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:ZDB-PUB-961014-576] synonym: "neuromast otic" EXACT [] synonym: "neuromasts otic" EXACT PLURAL [] xref: TAO:0000136 xref: ZFIN:ZDB-ANAT-010921-565 is_a: ZFA:0000243 ! neuromast relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000464 ! otic lateral line relationship: start ZFS:0000036 ! Larval:Day 4 [Term] id: ZFA:0000137 name: optic stalk namespace: zebrafish_anatomy synonym: "optic stalks" EXACT PLURAL [] xref: TAO:0000137 xref: ZFIN:ZDB-ANAT-010921-566 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000101 ! diencephalon relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000138 name: otic placode namespace: zebrafish_anatomy def: "Primordium of the ear epithelium before it hollows into the otic vesicle, present beside the hindbrain rudiment in the midsegmentation period. (Also see Anatomical Atlas entry for ear by T. Whitfield.)" [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000138 xref: ZFIN:ZDB-ANAT-010921-568 is_a: ZFA:0001310 ! dorsolateral placode relationship: end ZFS:0000028 ! Segmentation:26+ somites relationship: part_of ZFA:0001138 ! vestibuloauditory system relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0000140 name: pancreas namespace: zebrafish_anatomy xref: TAO:0000140 xref: ZFIN:ZDB-ANAT-010921-570 is_a: ZFA:0000496 ! compound organ relationship: develops_from ZFA:0001390 ! pancreatic bud relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001371 ! pancreatic system relationship: part_of ZFA:0001438 ! coelom relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0000141 name: pectoral fin bud namespace: zebrafish_anatomy synonym: "pectoral fin buds" EXACT PLURAL [] xref: TAO:0000141 xref: ZFIN:ZDB-ANAT-010921-571 is_a: ZFA:0001383 ! fin bud relationship: develops_from ZFA:0001453 ! pectoral fin field relationship: end ZFS:0000033 ! Hatching:Long-pec relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000142 name: peripheral nervous system namespace: zebrafish_anatomy def: "Nervous structures including ganglia outside of the central nervous system." [ZFIN:ZDB-PUB-961014-576] synonym: "pns" EXACT [] xref: TAO:0000142 xref: ZFIN:ZDB-ANAT-010921-572 is_a: ZFA:0000396 ! nervous system relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0000143 name: retinal photoreceptor layer namespace: zebrafish_anatomy def: "The layer within the retina where the photoreceptor cell receptor segments reside." [ZFIN:curator] synonym: "retinal photoreceptor layers" EXACT PLURAL [] xref: TAO:0000143 xref: ZFIN:ZDB-ANAT-010921-574 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000046 ! retinal neural layer relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0000144 name: retinal pigmented epithelium namespace: zebrafish_anatomy def: "A monolayer of pigmented epithelium covering the neural retina; develops from the outer of the two layers of the optic cup." [ZFIN:ZDB-PUB-961014-576] synonym: "pigmented epithelium" EXACT [] synonym: "pigmented retina" EXACT [] synonym: "pigmented retinal epithelium" EXACT [] synonym: "PRE" EXACT [] synonym: "RPE" EXACT [] xref: TAO:0000144 xref: ZFIN:ZDB-ANAT-010921-575 is_a: ZFA:0001486 ! epithelium relationship: develops_from ZFA:0000064 ! presumptive retinal pigmented epithelium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000152 ! retina relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0000145 name: CNS white matter namespace: zebrafish_anatomy def: "White matter that is part of the central nervous system" [ZFIN:curator] synonym: "CNS tract/commissure" EXACT [] xref: TAO:0000145 xref: TAO:0002143 xref: ZFIN:ZDB-ANAT-060131-5 is_a: ZFA:0001682 ! white matter relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000012 ! central nervous system relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000146 name: presumptive brain namespace: zebrafish_anatomy synonym: "brain rudiment" EXACT [] xref: TAO:0000146 xref: ZFIN:ZDB-ANAT-010921-578 is_a: ZFA:0001105 ! embryonic structure relationship: end ZFS:0000020 ! Gastrula:75%-epiboly relationship: part_of ZFA:0000063 ! presumptive neural plate relationship: start ZFS:0000014 ! Blastula:Sphere [Term] id: ZFA:0000148 name: presumptive midbrain namespace: zebrafish_anatomy synonym: "presumptive mesencephalon" EXACT [] xref: TAO:0000148 xref: ZFIN:ZDB-ANAT-010921-580 is_a: ZFA:0001105 ! embryonic structure relationship: end ZFS:0000020 ! Gastrula:75%-epiboly relationship: part_of ZFA:0000146 ! presumptive brain relationship: part_of ZFA:0007014 ! anterior presumptive neural plate relationship: start ZFS:0000019 ! Gastrula:Shield [Term] id: ZFA:0000149 name: primitive heart tube namespace: zebrafish_anatomy def: "Multi-tissue structure that arises from the heart rudiment and will become the heart tube." [ZFIN:ZDB-PUB-010219-2] xref: TAO:0000149 xref: ZFIN:ZDB-ANAT-010921-583 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0000115 ! heart rudiment relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000150 name: pronephric duct namespace: zebrafish_anatomy def: "Duct of the embryonic kidney, present bilaterally ventral to the somites and leading to the cloacal chamber. Wingert et al. have suggested that the pronephric duct as described traditionally may consist of subregions which are analogous to portions of the tubule segment of mammalian and other fish nephrons." [ZFIN:ZDB-PUB-071029-9, ZFIN:ZDB-PUB-961014-576] synonym: "pronephric ducts" EXACT PLURAL [] xref: TAO:0000150 xref: ZFIN:ZDB-ANAT-010921-585 is_a: ZFA:0005171 ! duct relationship: develops_from ZFA:0000067 ! pronephric mesoderm relationship: end ZFS:0000037 ! Larval:Day 5 relationship: part_of ZFA:0000151 ! pronephros relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000151 name: pronephros namespace: zebrafish_anatomy def: "The embryonic kidney, present at the level of the third somite, is composed of two glomeruli fused at the midline, two pronephric tubules, and paired bilateral pronephric ducts that modify the composition of the blood filtrate before delivering it to the cloaca for excretion." [ZFIN:ZDB-PUB-961014-576] synonym: "embryonic kidney" EXACT [ZFIN:ZDB-PUB-961014-576] synonym: "pronephric nephron" EXACT [] xref: TAO:0000151 xref: ZFIN:ZDB-ANAT-010921-586 is_a: ZFA:0001490 ! cavitated compound organ relationship: develops_from ZFA:0000067 ! pronephric mesoderm relationship: end ZFS:0000037 ! Larval:Day 5 relationship: part_of ZFA:0000163 ! renal system relationship: part_of ZFA:0001438 ! coelom relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000152 name: retina namespace: zebrafish_anatomy def: "Multi-tissue structure that contains the retinal neural layer and the retinal pigmented epithelium, and develops from the optic cup." [ZFIN:ZDB-PUB-961014-576] synonym: "retinas" EXACT PLURAL [] xref: TAO:0000152 xref: ZFIN:ZDB-ANAT-010921-587 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001202 ! optic cup relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000107 ! eye relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0000153 name: rhombomere 8 namespace: zebrafish_anatomy def: "Hindbrain segment or neuromere." [ZFIN:ZDB-PUB-961014-576] synonym: "r8" EXACT [] xref: TAO:0000153 xref: ZFIN:ZDB-ANAT-010921-588 is_a: ZFA:0001064 ! rhombomere relationship: develops_from ZFA:0001214 ! presumptive rhombomere 8 relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000154 name: sinus venosus namespace: zebrafish_anatomy def: "Heart region collecting blood from the paired common cardinal veins and delivering to the atrium. One of four heart chambers, the sinus venosus also acts as a pacemaker and is the first to contract." [ZFIN:ZDB-PUB-961014-576] synonym: "inflow tract" EXACT [] xref: TAO:0000154 xref: ZFIN:ZDB-ANAT-010921-590 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001722 ! presumptive sinus venosus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000114 ! heart relationship: start ZFS:0000032 ! Pharyngula:High-pec [Term] id: ZFA:0000155 name: somite namespace: zebrafish_anatomy def: "Undifferentiated mesodermal components of early trunk or tail segments or metameres, derived from paraxial mesoderm; forms myotomes, sclerotomes and perhaps dermatomes." [ZFIN:ZDB-PUB-961014-576] synonym: "somitic mesoderm" EXACT [] xref: TAO:0000155 xref: ZFIN:ZDB-ANAT-010921-591 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000279 ! segmental plate relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001115 ! trunk relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0000156 name: somite 20 namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000156 xref: ZFIN:ZDB-ANAT-010921-593 is_a: ZFA:0000155 ! somite relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000157 name: somite 30 namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000157 xref: ZFIN:ZDB-ANAT-010921-594 is_a: ZFA:0000155 ! somite relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000158 name: urostyle namespace: zebrafish_anatomy def: "This centrum may be formed via the fusion of the terminal centrum and half-centrum. It is sometimes termed the 'ultimate' vertebra." [ZFIN:ZDB-PUB-011008-1] synonym: "compound centrum" EXACT [] synonym: "last vertebra" EXACT [] synonym: "ultimate vertebra" EXACT [] xref: TAO:0000158 xref: ZFIN:ZDB-ANAT-010921-596 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001581 ! ural centrum 2 relationship: develops_from ZFA:0001583 ! preural centrum 1+ ural centrum 1 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000862 ! caudal fin skeleton relationship: start ZFS:0000040 ! Larval:Days 14-20 [Term] id: ZFA:0000159 name: tectal ventricle namespace: zebrafish_anatomy synonym: "cerebral aquaduct" EXACT [] synonym: "medial tectal ventricle" EXACT [] synonym: "mesencephalic ventricle" EXACT [] synonym: "mesencephalic vesicle" EXACT [] synonym: "midbrain ventricle" EXACT [] xref: TAO:0000159 xref: ZFIN:ZDB-ANAT-010921-597 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000128 ! midbrain relationship: part_of ZFA:0001261 ! ventricular system relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000160 name: tegmentum namespace: zebrafish_anatomy alt_id: ZFA:0001354 def: "Multi-tissue structure that is the ventral part of the midbrain and develops from the basal plate. The tegmentum is bordered rostrally by the synencephalon, dorsal thalamus and posterior tuberculum, ventrally by the hypothalamus, and dorsolaterally by the torus semicircularis; caudally the tegmentum is continuous with the medulla oblongata." [ZFIN:curator] synonym: "mesencephalic tegmentum" EXACT [] synonym: "midbrain tegmentum" EXACT [] xref: TAO:0000160 xref: ZFIN:ZDB-ANAT-010921-598 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0000761 ! basal plate midbrain region relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000128 ! midbrain relationship: part_of ZFA:0001707 ! brainstem relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000161 name: third ventricle namespace: zebrafish_anatomy def: "Fluid-filled brain cavity." [ZFIN:ZDB-PUB-961014-576] synonym: "3rd ventricle" EXACT [] synonym: "diencephalic ventricle" EXACT [] synonym: "diencephalic vesicle" EXACT [] synonym: "ventriculus diencephali" EXACT [] xref: TAO:0000161 xref: ZFIN:ZDB-ANAT-010921-599 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001259 ! forebrain ventricle relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000101 ! diencephalon relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000162 name: trigeminal placode namespace: zebrafish_anatomy def: "The ectodermal rudiment of the trigeminal ganglion, distinguishable during much of the segmentation period." [ZFIN:ZDB-PUB-961014-576] synonym: "trigeminal placodes" EXACT PLURAL [] xref: TAO:0000162 xref: ZFIN:ZDB-ANAT-010921-600 is_a: ZFA:0001310 ! dorsolateral placode relationship: end ZFS:0000026 ! Segmentation:14-19 somites relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0000163 name: renal system namespace: zebrafish_anatomy xref: TAO:0000163 xref: ZFIN:ZDB-ANAT-010921-601 is_a: ZFA:0001439 ! anatomical system relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000164 name: ventral mesenchyme namespace: zebrafish_anatomy xref: TAO:0000164 xref: ZFIN:ZDB-ANAT-010921-602 is_a: ZFA:0000393 ! mesenchyme relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000165 name: inferior lobe namespace: zebrafish_anatomy def: "Multi-tissue structure that is a paired nucleus located in the lateral expansion of the dorsal hypothalamic zone. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] synonym: "inferior lobes" EXACT PLURAL [] synonym: "lateral lobe of hypothalamus" EXACT [] xref: TAO:0000165 xref: ZFIN:ZDB-ANAT-011113-1 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000347 ! dorsal hypothalamic zone relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000166 name: lateral crista namespace: zebrafish_anatomy alt_id: ZFA:0000378 def: "Patches of thickened, pseudostratified epithelium of the inner ear, consisting of regular arrays of sensory hair cells interspersed with supporting cells. Each patch has its own characteristic shape and polarity pattern. (See Anatomical Atlas entry for sensory patches of the ear by T. Whitfield.)" [ZFIN:curator] synonym: "lateral crista ampullaris" EXACT [] synonym: "lateral cristae" EXACT PLURAL [] synonym: "lateral semicircular canal sensory patch" EXACT [] synonym: "lateral semicircular canal sensory patches" EXACT PLURAL [] synonym: "lc" EXACT [] xref: TAO:0000166 xref: ZFIN:ZDB-ANAT-011113-10 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000220 ! lateral semicircular canal relationship: start ZFS:0000035 ! Larval:Protruding-mouth [Term] id: ZFA:0000167 name: anal fin skeleton namespace: zebrafish_anatomy xref: TAO:0000167 xref: ZFIN:ZDB-ANAT-011113-100 is_a: ZFA:0001123 ! axial fin skeleton relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001162 ! anal fin relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000168 name: anterior macula namespace: zebrafish_anatomy def: "Macula that is located in the developing anterior inner ear, and gives rise to the macula utricle. (See Anatomical Atlas entry for sensory patches of the ear by T. Whitfield.)" [http://zfin.org/zf_info/anatomy/dict/sens/sens.html, ZFIN:curator] synonym: "am" EXACT [] synonym: "anterior sensory patch" EXACT [] xref: TAO:0000168 xref: ZFIN:ZDB-ANAT-011113-101 is_a: ZFA:0000386 ! macula relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0001671 ! macula communis relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000169 name: antorbital namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-102 is_obsolete: true [Term] id: ZFA:0000170 name: basibranchial namespace: zebrafish_anatomy def: "Median elements that are ossified within copulae and are not assigned to a specific branchial arch number. They articulate posterolaterally with the hypobranchials." [ZFIN:curator] synonym: "basibranchials" EXACT PLURAL [] xref: TAO:0000170 xref: ZFIN:ZDB-ANAT-011113-104 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001220 ! copula relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000171 name: basisphenoid namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-105 is_obsolete: true [Term] id: ZFA:0000172 name: branchial muscle namespace: zebrafish_anatomy synonym: "branchial muscles" EXACT PLURAL [] xref: TAO:0000172 xref: ZFIN:ZDB-ANAT-011113-106 is_a: ZFA:0001652 ! head muscle relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001307 ! pharyngeal musculature relationship: part_of ZFA:0001613 ! pharyngeal arch 3-7 relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000173 name: bulbus arteriosus namespace: zebrafish_anatomy def: "Multi-tissue structure that consists of three layers and through which the blood exits the heart. The bulbus arteriosus is a pear shaped chamber that functions as a capacitor, maintaining continuous blood flow into the gill arches." [ZFIN:ZDB-PUB-001026-2] synonym: "cardiac outflow tract" EXACT [] synonym: "outflow tract" EXACT [] synonym: "truncus" EXACT [] xref: TAO:0000173 xref: ZFIN:ZDB-ANAT-011113-107 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001712 ! presumptive bulbus arteriosus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000114 ! heart relationship: start ZFS:0000032 ! Pharyngula:High-pec [Term] id: ZFA:0000174 name: cerebellovestibular tract namespace: zebrafish_anatomy def: "Cerebellar tract that consists of efferent fibers from the Purkinje cells to the neurons of the vestibular nuclei in the hindbrain. The cerebellovestibular tracts are involved in precise motor controls, such as the vestibulo-ocular reflex." [ZFIN:ZDB-PUB-090422-9] synonym: "caudal cerebellar tract" EXACT [] synonym: "caudal cerebellar tracts" EXACT PLURAL [] synonym: "cerebellovestibular tracts" EXACT PLURAL [] xref: TAO:0000174 xref: ZFIN:ZDB-ANAT-011113-108 is_a: ZFA:0001708 ! cerebellar white matter relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000100 ! cerebellum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000175 name: posterior lateral line nerve namespace: zebrafish_anatomy def: "Cranial nerve which enters the brain between cranial nerves VIII and IX; contains afferents and sensory efferents to the posterior lateral line ganglion and middle ganglion. Fibers from the posterior lateral line ganglion innervate the occipital dorsal lateral line and trunk lateral lines." [ZFIN:ZDB-PUB-000523-3, ZFIN:ZDB-PUB-961014-763] synonym: "caudal lateral line nerve" EXACT [] xref: TAO:0000175 xref: ZFIN:ZDB-ANAT-011113-109 is_a: ZFA:0000641 ! cranial nerve is_a: ZFA:0001479 ! lateral line nerve relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001471 ! posterior lateral line system relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000176 name: lateral nucleus of ventral telencephalon namespace: zebrafish_anatomy def: "Peripheral nucleus of the ventral telencephalon that has migrated to the periphery of the brain. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] synonym: "area ventralis telencephali, nucleus lateralis" EXACT [] xref: TAO:0002204 xref: ZFIN:ZDB-ANAT-011113-11 is_a: ZFA:0001667 ! peripheral nucleus of ventral telencephalon relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000177 name: caudal oblique namespace: zebrafish_anatomy synonym: "caudal obliques" EXACT PLURAL [] xref: TAO:0000177 xref: ZFIN:ZDB-ANAT-011113-110 is_a: ZFA:0000172 ! branchial muscle relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000178 name: caudal peduncle namespace: zebrafish_anatomy xref: TAO:0000178 xref: ZFIN:ZDB-ANAT-011113-111 is_a: ZFA:0000292 ! surface structure relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000179 name: caudal root of abducens nerve namespace: zebrafish_anatomy def: "Cranial nerve root which is part of the abducens nerve (CN-VI) and is located at the level of the intermediate reticular formation. Fuses with the rostral root of the abducens nerve and courses rostrally once outside the brain stem. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209] synonym: "radix caudalis nervi abducentis" EXACT [] xref: TAO:0000179 xref: ZFIN:ZDB-ANAT-011113-112 is_a: ZFA:0001663 ! cranial nerve root relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000310 ! cranial nerve VI relationship: part_of ZFA:0000545 ! medulla oblongata relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000180 name: caudal vein namespace: zebrafish_anatomy def: "Vein in the tail returning blood from the trunk and tail to the heart, leads directly into the posterior cardinal vein in the posterior trunk." [ZFIN:ZDB-PUB-961014-576] synonym: "CV" EXACT [] xref: TAO:0000180 xref: ZFIN:ZDB-ANAT-011113-113 is_a: ZFA:0000082 ! vein relationship: develops_from ZFA:0001286 ! caudal vein plexus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005037 ! post-vent vasculature relationship: part_of ZFA:0005295 ! axial blood vessel relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0000181 name: caudal zone of dorsal telencephalon namespace: zebrafish_anatomy def: "Telencephalic nucleus which is the most caudally located part of the dorsal telencephalon and surrounds the central zone of dorsal telencephalon. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] synonym: "area dorsalis telencephali, zona posterior" EXACT [] synonym: "caudal zone of D" EXACT [] synonym: "posterior zone of dorsal telencephalic area" EXACT [] xref: TAO:0000181 xref: ZFIN:ZDB-ANAT-011113-114 is_a: ZFA:0001660 ! telencephalic nucleus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000505 ! dorsal telencephalon relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000182 name: central caudal thalamic nucleus namespace: zebrafish_anatomy def: "Diencephalic nucleus which is located in the caudal portion of the dorsal thalamus, ventral to the dorsal caudal thalamic nucleus." [ZFIN:curator] synonym: "central posterior thalamic nucleus" EXACT [] synonym: "nucleus centralis posterior thalami" EXACT [] xref: TAO:0000182 xref: ZFIN:ZDB-ANAT-011113-115 is_a: ZFA:0001659 ! diencephalic nucleus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000653 ! dorsal thalamus relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000183 name: central pretectum namespace: zebrafish_anatomy def: "Multi-tissue structure that is the central part of the pretectum." [ZFIN:curator] xref: TAO:0000183 xref: ZFIN:ZDB-ANAT-011113-116 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000418 ! pretectum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000184 name: cleithrum namespace: zebrafish_anatomy def: "Transversely oriented bone connecting the occipital region of the skull dorsally and pectoral girdle ventrally; appears near the end of embryogenesis." [ZFIN:ZDB-PUB-961014-576] synonym: "cleithra" EXACT PLURAL [] xref: TAO:0000184 xref: ZFIN:ZDB-ANAT-011113-117 is_a: ZFA:0001591 ! endochondral bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000407 ! pectoral girdle relationship: start ZFS:0000032 ! Pharyngula:High-pec [Term] id: ZFA:0000185 name: commissura rostral, pars ventralis namespace: zebrafish_anatomy def: "Anterior commissure which abuts the preoptic region dorsally. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209] synonym: "commissura anterior, pars ventralis" EXACT [] xref: TAO:0000185 xref: ZFIN:ZDB-ANAT-011113-118 is_a: ZFA:0001108 ! anterior commissure relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000186 name: common cardinal vein namespace: zebrafish_anatomy def: "Bilaterally paired longitudinal vein; the anterior cardinal returns blood from the head, and the posterior cardinal returns it from the trunk; these two vessels join together on each side as the common cardinal vein (duct of Cuvier; misnamed the vitelline vein) that leads across the yolk cell to the heart's sinus venosus." [ZFIN:ZDB-PUB-961014-576] synonym: "duct of Cuvier" EXACT [] xref: TAO:0000186 xref: ZFIN:ZDB-ANAT-011113-119 is_a: ZFA:0000082 ! vein relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000096 ! cardinal system relationship: part_of ZFA:0005024 ! trunk vasculature relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000188 name: corpus cerebelli namespace: zebrafish_anatomy def: "Brain structure which is one of three parts of the cerebellum and is the entry point for a posterior cerebellar tract that carries cerebellar afferents from many brain stem nuclei. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209] synonym: "cerebellar corpus" EXACT [] synonym: "corpus cerebellum" EXACT PLURAL [] xref: TAO:0000188 xref: ZFIN:ZDB-ANAT-011113-120 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000100 ! cerebellum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000189 name: otic region namespace: zebrafish_anatomy def: "Anatomical cluster that is a posterolateral part of the cranium and structurally supports the vestibuloauditory system." [ZFIN:curator] synonym: "cranial vault" RELATED [] xref: TAO:0000189 xref: ZFIN:ZDB-ANAT-011113-121 is_a: ZFA:0001478 ! anatomical cluster relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000737 ! cranium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000190 name: ganglion namespace: zebrafish_anatomy def: "Structures containing a collection of nerve cell bodies." [ZFIN:curator] synonym: "ganglia" EXACT PLURAL [] xref: TAO:0000190 xref: ZFIN:ZDB-ANAT-011113-122 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000142 ! peripheral nervous system relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0000191 name: dentary namespace: zebrafish_anatomy def: "Dermal bone that forms the antero-lateral part of the lower jaw. It first appears around the anterior end of Meckel's cartilage (5.1 mm NL). In the adult, the dentary meets its counterpart anteriorly at the mandibular symphysis. The dentary abuts the retroarticular posteriorly, and it surround the anguloarticular. The dentary is connected to the maxilla by the maxillo-mandibular ligament. Dentary teeth are absent in cypriniforms, but are present in other ostariophysans." [ZFIN:curator] synonym: "dentary bone" EXACT [] xref: TAO:0000191 xref: ZFIN:ZDB-ANAT-011113-123 is_a: ZFA:0001590 ! dermal bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001273 ! ventral mandibular arch relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000192 name: descending trigeminal root namespace: zebrafish_anatomy synonym: "radix descendens nervi trigemini" EXACT [] xref: TAO:0000192 xref: ZFIN:ZDB-ANAT-011113-124 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000545 ! medulla oblongata relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000193 name: diffuse nucleus inferior lobe namespace: zebrafish_anatomy def: "Diencephalic nucleus which is part of the inferior lobe of the hypothalamus and consists of masses of small cells presumably migrated from the periventricular cell masses. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] synonym: "diffuse nuclei" EXACT PLURAL [] synonym: "DIL" EXACT [] xref: TAO:0000193 xref: ZFIN:ZDB-ANAT-011113-125 is_a: ZFA:0001659 ! diencephalic nucleus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000165 ! inferior lobe relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000194 name: dorsal accessory optic nucleus namespace: zebrafish_anatomy def: "Diencephalic nucleus that is part of the central pretectum and is ventral to the magnocellular superficial pretectal nucleus and the caudal pretectal nucleus. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] synonym: "nucleus opticus accessorius dorsalis" EXACT [] xref: TAO:0000194 xref: ZFIN:ZDB-ANAT-011113-126 is_a: ZFA:0001659 ! diencephalic nucleus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000183 ! central pretectum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000195 name: dorsal depressor namespace: zebrafish_anatomy synonym: "dorsal depressors" EXACT PLURAL [] xref: TAO:0000195 xref: ZFIN:ZDB-ANAT-011113-127 is_a: ZFA:0005270 ! depressor muscle relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000648 ! dorsal fin musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000196 name: dorsal hypohyal bone namespace: zebrafish_anatomy def: "The dorsal hypohyal is a small cartilage replacement bone ossifying from the anterodorsal ceratohyal cartilage. Ossification begins on the medial surface of the ceratohyal cartilage at a ligamentous connection to basibranchial 1 (6.8 mm)." [ZFIN:curator] synonym: "dorsal hypohyals" EXACT PLURAL [] xref: TAO:0000196 xref: ZFIN:ZDB-ANAT-011113-128 is_a: ZFA:0001381 ! hypohyal bone relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000197 name: dorsal nucleus namespace: zebrafish_anatomy synonym: "dorsal nuclei" EXACT PLURAL [] xref: TAO:0000197 xref: ZFIN:ZDB-ANAT-011113-129 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000213 ! habenula relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000199 name: dorsal periventricular hypothalamus namespace: zebrafish_anatomy def: "Diencephalic nucleus which is part of the dorsal hypothalamic zone and is located periventricularly. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] xref: TAO:0000199 xref: ZFIN:ZDB-ANAT-011113-130 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000347 ! dorsal hypothalamic zone relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000200 name: dorsal root ganglion namespace: zebrafish_anatomy def: "Trunk ganglion which is located adjacent to the spine on a dorsal root and contains the cell bodies of afferent sensory nerves." [ZFIN:curator] synonym: "dorsal root ganglia" EXACT PLURAL [] synonym: "DRG" EXACT [] xref: TAO:0000200 xref: ZFIN:ZDB-ANAT-011113-131 is_a: ZFA:0001573 ! trunk ganglion relationship: develops_from ZFA:0001024 ! trunk neural crest relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000201 name: dorsal transverse namespace: zebrafish_anatomy xref: TAO:0000201 xref: ZFIN:ZDB-ANAT-011113-132 is_a: ZFA:0000172 ! branchial muscle relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000202 name: efferent branchial artery namespace: zebrafish_anatomy synonym: "EBA" EXACT [] xref: TAO:0000202 xref: ZFIN:ZDB-ANAT-011113-133 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000354 ! gill relationship: part_of ZFA:0005003 ! pharyngeal vasculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000203 name: epicentrals namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-134 is_obsolete: true [Term] id: ZFA:0000204 name: esophagus namespace: zebrafish_anatomy synonym: "oesophagus" EXACT [] xref: TAO:0000204 xref: ZFIN:ZDB-ANAT-011113-135 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000112 ! gut relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0000205 name: external ventral flexor namespace: zebrafish_anatomy xref: TAO:0000205 xref: ZFIN:ZDB-ANAT-011113-136 is_a: ZFA:0005271 ! flexor muscle relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000628 ! caudal fin musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000206 name: facial nerve motor nucleus namespace: zebrafish_anatomy synonym: "facial motor nucleus" EXACT [] synonym: "motor nucleus VII" EXACT [] synonym: "nucleus motorius nervi facialis" EXACT [] synonym: "nVII" EXACT [] xref: TAO:0000206 xref: ZFIN:ZDB-ANAT-011113-137 is_a: ZFA:0001658 ! hindbrain nucleus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000545 ! medulla oblongata relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000207 name: fin musculature namespace: zebrafish_anatomy xref: TAO:0000207 xref: ZFIN:ZDB-ANAT-011113-138 is_a: ZFA:0000548 ! musculature system relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0000208 name: gall bladder namespace: zebrafish_anatomy xref: TAO:0000208 xref: ZFIN:ZDB-ANAT-011113-139 is_a: ZFA:0000496 ! compound organ relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000036 ! liver and biliary system relationship: part_of ZFA:0000339 ! digestive system relationship: part_of ZFA:0001438 ! coelom relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0000209 name: lateral preglomerular nucleus namespace: zebrafish_anatomy def: "Preglomerular nucleus which is located between the rostral and medial preglomerular nuclei of the caudal tuberculum. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] synonym: "lateral preglomerular nuclei" EXACT PLURAL [] xref: TAO:0000209 xref: ZFIN:ZDB-ANAT-011113-14 is_a: ZFA:0001662 ! preglomerular nucleus relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000210 name: gigantocellular part of magnocellular preoptic nucleus namespace: zebrafish_anatomy def: "Portion of tissue that is the caudal gigantocellular portion of the magnocellular preoptic nucleus. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209] synonym: "nucleus praeopticus magnocellularis, pars gigantocellularis" EXACT [] xref: TAO:0000210 xref: ZFIN:ZDB-ANAT-011113-140 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000248 ! magnocellular preoptic nucleus relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000211 name: gill lamella namespace: zebrafish_anatomy def: "Multi-tissue structure that is the transverse vertical platelet on the gill filament, through which capillaries run. The primary gill lamellae carry numerous fine layers called secondary lamellae which are the actual regions of respiration and excretion." [http:www.briancoad.com/Dictionary/G.htm] synonym: "gill lamellae" EXACT PLURAL [] xref: TAO:0000211 xref: ZFIN:ZDB-ANAT-011113-141 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000354 ! gill relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000212 name: granular eminence namespace: zebrafish_anatomy alt_id: ZFA:0000187 def: "Brain structure which is paired and part of the vestibulolateralis lobe of the cerebellum and extends fibers into the cerebellar crest. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] synonym: "EG" RELATED [] synonym: "eminentia granularis" EXACT [] synonym: "lateral granular eminence" EXACT [] xref: TAO:0000212 xref: ZFIN:ZDB-ANAT-011113-142 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000307 ! vestibulolateralis lobe relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000213 name: habenula namespace: zebrafish_anatomy def: "The habenula relays impulses from limbic areas of the telencephalon to an unpaired midbrain nucleus, the interpeduncular nucleus." [ZFIN:curator] synonym: "habenulae" EXACT PLURAL [] synonym: "habenular nucleus" EXACT [] xref: TAO:0000213 xref: ZFIN:ZDB-ANAT-011113-143 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000509 ! epithalamus relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0000214 name: hypobranchial vessel namespace: zebrafish_anatomy comment: May be the same as hypobranchial artery and may need to be merged. synonym: "hypobranchial vessels" EXACT PLURAL [] xref: TAO:0000214 xref: ZFIN:ZDB-ANAT-011113-144 is_a: ZFA:0005314 ! blood vessel relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000215 name: inferior olive namespace: zebrafish_anatomy xref: TAO:0000215 xref: ZFIN:ZDB-ANAT-011113-145 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000545 ! medulla oblongata relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000216 name: infracarinalis namespace: zebrafish_anatomy xref: TAO:0000216 xref: ZFIN:ZDB-ANAT-011113-146 is_a: ZFA:0005145 ! muscle relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000473 ! trunk musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000217 name: inner ear namespace: zebrafish_anatomy def: "The auditory (hearing) and vestibular (balance) organ of the fish, equivalent to the inner ear of amniotes. (See Anatomical Atlas entry for ear by T. Whitfield.)" [ZFIN:curator] synonym: "ear" EXACT [] synonym: "otic capsule" RELATED [] synonym: "otocyst" RELATED [] xref: TAO:0000217 xref: ZFIN:ZDB-ANAT-011113-147 is_a: ZFA:0001478 ! anatomical cluster relationship: develops_from ZFA:0000051 ! otic vesicle relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001138 ! vestibuloauditory system relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000219 name: intermediate reticular formation namespace: zebrafish_anatomy synonym: "intermediate reticular formations" EXACT PLURAL [] xref: TAO:0000219 xref: ZFIN:ZDB-ANAT-011113-149 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000542 ! medial column relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000220 name: lateral semicircular canal namespace: zebrafish_anatomy alt_id: ZFA:0000361 def: "One of three fluid-filled toroidal spaces, arranged orthogonally to each other in each ear, that detect angular acceleration. (See Anatomical Atlas entry for semicircular canals by T. Whitfield.)" [ZFIN:curator] synonym: "horizontal semicircular canal" EXACT [] synonym: "lateral semicircular canals" EXACT PLURAL [] synonym: "lateral semicircular duct" EXACT [] xref: TAO:0000220 xref: ZFIN:ZDB-ANAT-011113-15 is_a: ZFA:0000431 ! semicircular canal relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0000221 name: internal levator namespace: zebrafish_anatomy synonym: "internal levators" EXACT PLURAL [] xref: TAO:0000221 xref: ZFIN:ZDB-ANAT-011113-150 is_a: ZFA:0000172 ! branchial muscle relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000222 name: isthmic primary nucleus namespace: zebrafish_anatomy synonym: "isthmic primary nuclei" EXACT PLURAL [] xref: TAO:0000222 xref: ZFIN:ZDB-ANAT-011113-152 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000433 ! sensory trigeminal nucleus relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000223 name: infraorbital 1 namespace: zebrafish_anatomy def: "Dermal bone that covers the region between the anterior margin of the eye and the upper jaw. Infraorbital 1 (the lachrymal) is the first and largest bone in the infraorbital series. Bears the anterior most part of the infraorbital canal." [ZFIN:curator] synonym: "lachrymal bone" EXACT [] synonym: "lacrimal" EXACT [] synonym: "lacrymal bone" EXACT [] xref: TAO:0000223 xref: ZFIN:ZDB-ANAT-011113-153 is_a: ZFA:0000376 ! infraorbital relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001649 ! infraorbital series relationship: start ZFS:0000040 ! Larval:Days 14-20 [Term] id: ZFA:0000224 name: larva namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-154 is_obsolete: true [Term] id: ZFA:0000225 name: lateral crista primordium namespace: zebrafish_anatomy synonym: "lateral crista primordia" EXACT PLURAL [] xref: TAO:0000225 xref: ZFIN:ZDB-ANAT-011113-155 relationship: end ZFS:0000035 ! Larval:Protruding-mouth relationship: part_of ZFA:0000220 ! lateral semicircular canal relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0000226 name: lateral ethmoid namespace: zebrafish_anatomy def: "Large, paired cartilage bones separating the olfactory region from the orbit. Arises from both perichondral and endochondral ossifications (Harrington 1955). Bordered by the mesethmoid anteriorly and overlain by the frontal dorsally, each lateral ethmoid extends medially to meet its fellow posteriorly along the midline. Develops from the laminae orbitonasales." [ZFIN:curator] synonym: "lateral ethmoids" EXACT PLURAL [] xref: TAO:0000226 xref: ZFIN:ZDB-ANAT-011113-156 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001503 ! lamina orbitonasalis relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000351 ! olfactory region relationship: part_of ZFA:0001424 ! chondrocranium relationship: part_of ZFA:0001580 ! neurocranium relationship: start ZFS:0000040 ! Larval:Days 14-20 [Term] id: ZFA:0000227 name: lateral hypothalamic nucleus namespace: zebrafish_anatomy def: "Diencephalic nucleus which is the lateral part of the ventral hypothalamic zone. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] synonym: "arcuate nucleus" RELATED [] synonym: "lateral hypothalamic nuclei" EXACT PLURAL [] synonym: "lateral tuberal nucleus" EXACT [] xref: TAO:0000227 xref: ZFIN:ZDB-ANAT-011113-157 is_a: ZFA:0001659 ! diencephalic nucleus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000707 ! ventral hypothalamic zone relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000228 name: lateral line primordium namespace: zebrafish_anatomy synonym: "lateral line primordia" EXACT PLURAL [] synonym: "llp" EXACT [] xref: TAO:0000228 xref: ZFIN:ZDB-ANAT-011113-158 relationship: end ZFS:0000036 ! Larval:Day 4 relationship: part_of ZFA:0000034 ! lateral line system relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000229 name: lateral olfactory tract namespace: zebrafish_anatomy def: "Telencephalic white matter which extends between the olfactory bulb and the ipsilateral dorsal telencephalon and carries secondary olfactory fibers. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209] synonym: "tractus olfactorius lateralis" EXACT [] xref: TAO:0000229 xref: ZFIN:ZDB-ANAT-011113-159 is_a: ZFA:0000597 ! telencephalic white matter relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000230 name: longitudinal hypochordal namespace: zebrafish_anatomy xref: TAO:0000230 xref: ZFIN:ZDB-ANAT-011113-16 is_a: ZFA:0005145 ! muscle relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000628 ! caudal fin musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000231 name: lateral recess namespace: zebrafish_anatomy def: "Lateral protrusion of the third ventricle." [ZFIN:curator] synonym: "lateral recess of diencephalic ventricle" EXACT [ZFIN:ZDB-PUB-091221-27] synonym: "lateral recesses" EXACT PLURAL [] xref: TAO:0000231 xref: ZFIN:ZDB-ANAT-011113-160 is_a: ZFA:0001643 ! anatomical space relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000161 ! third ventricle relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000232 name: otic vesicle lateral protrusion namespace: zebrafish_anatomy def: "Otic vesicle protrusion that is initially laterally located and then bifurcates and fuses anteriorly with the anterior protrusion, and posteriorly with the posterior protrusion." [ZFIN:ZDB-PUB-090330-11] synonym: "lateral semicircular canal primordia" RELATED PLURAL [] synonym: "lateral semicircular canal primordium" RELATED [] xref: TAO:0000232 xref: ZFIN:ZDB-ANAT-011113-161 is_a: ZFA:0001715 ! otic vesicle protrusion relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000032 ! Pharyngula:High-pec [Term] id: ZFA:0000233 name: lower oral valve namespace: zebrafish_anatomy def: "Portion of tissue, located on the lower jaw that defines the caudal extent of the labial cavity. The oral valves control the flow of water into the mouth during routine respiration." [ZFIN:ZDB-PUB-060921-12] synonym: "breathing valve" RELATED [] synonym: "buccal valve " RELATED [] synonym: "lower internal lip" EXACT [ZFIN:ZDB-PUB-060921-12] synonym: "lower semilunar valve" EXACT [ZFIN:ZDB-PUB-060921-12] synonym: "mandibular valve" EXACT [] xref: TAO:0000233 xref: ZFIN:ZDB-ANAT-011113-162 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000695 ! labial cavity relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000234 name: macula neglecta namespace: zebrafish_anatomy def: "Portion of tissue that is a patch of thickened, pseudostratified epithelium in the inner ear, consisting of regular arrays of sensory hair cells interspersed with supporting cells. The macula neglecta a pair of sensory patches positioned on the floor of the utricle adjacent to the utriculosaccular foramen at the base of the common crus." [ZFIN:ZDB-PUB-010912-7, ZFIN:ZDB-PUB-0204030-4] synonym: "maculae neglecta" EXACT PLURAL [] xref: TAO:0000234 xref: ZFIN:ZDB-ANAT-011113-163 is_a: ZFA:0000386 ! macula relationship: develops_from ZFA:0000558 ! posterior macula relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000559 ! otolith organ relationship: start ZFS:0000040 ! Larval:Days 14-20 [Term] id: ZFA:0000235 name: magnocellular superficial pretectal nucleus namespace: zebrafish_anatomy def: "Diencephalic nucleus that is part of the superficial pretectum and is caudally contiguous with the caudal pretectal nucleus. Cells of the magnocellular superficial pretectal nucleus are slightly larger and more orderly around a central neuropil than those of the caudal pretectal nucleus. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] synonym: "magnocellular superficial pretectal nuclei" EXACT PLURAL [] xref: TAO:0000235 xref: ZFIN:ZDB-ANAT-011113-164 is_a: ZFA:0001659 ! diencephalic nucleus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000687 ! superficial pretectum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000236 name: mandibular muscle namespace: zebrafish_anatomy synonym: "mandibular muscles" EXACT PLURAL [] xref: TAO:0000236 xref: ZFIN:ZDB-ANAT-011113-165 is_a: ZFA:0001652 ! head muscle relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001307 ! pharyngeal musculature relationship: part_of ZFA:0001612 ! pharyngeal arch 1 relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000237 name: medial forebrain bundle diencephalon namespace: zebrafish_anatomy synonym: "medial forebrain bundles diencephalon" EXACT PLURAL [] xref: TAO:0000237 xref: ZFIN:ZDB-ANAT-011113-167 is_a: ZFA:0000338 ! diencephalic white matter relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005111 ! medial forebrain bundle relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000238 name: medial olfactory tract namespace: zebrafish_anatomy def: "Telencephalic white matter which extends between the olfactory bulb and the ipsilateral ventral telencephalon and carries secondary olfactory fibers. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] synonym: "tractus olfactorius medialis" EXACT [] xref: TAO:0000238 xref: ZFIN:ZDB-ANAT-011113-168 is_a: ZFA:0000597 ! telencephalic white matter relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000239 name: mesocoracoid bone namespace: zebrafish_anatomy def: "Endochondral bone that articulates laterally with the medial surface of the cleithrum and ventro-medially with the scapula and coracoid. Mesocoracoid bone is a small, arch-like bone that develops from the mesocoracoid cartilage. Mesocoracoid bone is paired." [TAO:curator] synonym: "mesocoracoid bones" EXACT PLURAL [] xref: TAO:0000239 xref: ZFIN:ZDB-ANAT-011113-171 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001537 ! mesocorocoid cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000407 ! pectoral girdle relationship: start ZFS:0000041 ! Larval:Days 21-29 [Term] id: ZFA:0000240 name: metapterygoid namespace: zebrafish_anatomy def: "The metapterygoid is a posterior bone that ossifies in the cartilaginous palatoquadrate arch. It first appears as a rod of bone with an anterodorsally projecting process from the middle of the dorsal surface (6.4 mm). The adult metapterygoid is roughly rectangular in shape with rounded corners and an anterodorsally projecting spine that meets the entopterygoid medially in a synostosis at its posteromedial edge. The posterior end curves dorsally to form the posteroventral surface of the orbit." [ZFIN:curator] synonym: "metapterygoids" EXACT PLURAL [] xref: TAO:0000240 xref: ZFIN:ZDB-ANAT-011113-172 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001399 ! palatoquadrate cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001272 ! palatoquadrate arch relationship: start ZFS:0000040 ! Larval:Days 14-20 [Term] id: ZFA:0000241 name: midline column namespace: zebrafish_anatomy xref: TAO:0000241 xref: ZFIN:ZDB-ANAT-011113-173 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000421 ! reticular formation relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000242 name: male organism namespace: zebrafish_anatomy def: "Gonochoristic organism that can produce male gametes." [ZFIN:curator] xref: CARO:0000027 xref: TAO:0000242 xref: ZFIN:ZDB-ANAT-061101-3 is_a: ZFA:0001094 ! whole organism relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000041 ! Larval:Days 21-29 [Term] id: ZFA:0000243 name: neuromast namespace: zebrafish_anatomy def: "Volcano-shaped lateral line sensory organ located in characteristic positions within the skin epithelium and containing hair cells and their support elements. (Also see Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:ZDB-PUB-961014-576] synonym: "lateral line neuromast" EXACT [] synonym: "lateral line organ" EXACT [] synonym: "neuromasts" EXACT PLURAL [] xref: TAO:0000243 xref: ZFIN:ZDB-ANAT-011113-175 is_a: ZFA:0001478 ! anatomical cluster relationship: develops_from ZFA:0005227 ! protoneuromast relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000034 ! lateral line system relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000244 name: nucleus Edinger-Westphal namespace: zebrafish_anatomy synonym: "Edinger-Westphal nucleus" EXACT [] xref: TAO:0000244 xref: ZFIN:ZDB-ANAT-011113-176 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000160 ! tegmentum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000245 name: nucleus of the descending root namespace: zebrafish_anatomy xref: TAO:0000245 xref: ZFIN:ZDB-ANAT-011113-177 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000433 ! sensory trigeminal nucleus relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000246 name: nucleus taeniae namespace: zebrafish_anatomy def: "Telencephalic nucleus which is located immediately ventral to the caudal zone of dorsal telencephalon. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] xref: TAO:0000246 xref: ZFIN:ZDB-ANAT-011113-178 is_a: ZFA:0001660 ! telencephalic nucleus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000505 ! dorsal telencephalon relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000247 name: cranial nerve VIII namespace: zebrafish_anatomy synonym: "auditory nerve" EXACT [] synonym: "CN-VIII" EXACT [] synonym: "octaval nerve" EXACT [] synonym: "statoacoustic nerve" EXACT [] xref: TAO:0000247 xref: ZFIN:ZDB-ANAT-011113-179 is_a: ZFA:0000641 ! cranial nerve relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000248 name: magnocellular preoptic nucleus namespace: zebrafish_anatomy def: "Diencephalic nucleus that is dorsal to the caudal parvocellular preoptic nucleus. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] synonym: "magnocellular preoptic nuclei" EXACT PLURAL [] xref: TAO:0000248 xref: ZFIN:ZDB-ANAT-011113-18 is_a: ZFA:0001659 ! diencephalic nucleus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000470 ! preoptic area relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000249 name: cranial nerve I namespace: zebrafish_anatomy synonym: "CN-I" EXACT [] synonym: "olfactory nerve" EXACT [] xref: TAO:0000249 xref: ZFIN:ZDB-ANAT-011113-180 is_a: ZFA:0000641 ! cranial nerve relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001149 ! olfactory system relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000250 name: opercle namespace: zebrafish_anatomy def: "Dermal bone that articulates anteriorly with the hyomandibula. The opercle is paired and typically the largest bone of the opercular series." [ZFIN:Curator] synonym: "opercles" EXACT PLURAL [] xref: TAO:0000250 xref: ZFIN:ZDB-ANAT-011113-181 is_a: ZFA:0001590 ! dermal bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000555 ! opercular flap relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001401 ! dorsal hyoid arch relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000251 name: opercular-branchiostegal series namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-182 is_obsolete: true [Term] id: ZFA:0000252 name: optic tract namespace: zebrafish_anatomy def: "Diencephalic white matter (tract) which is comprised of retinal ganglion cell axons after which they have passed through the optic chiasm." [ZFIN:curator] synonym: "optic tracts" EXACT PLURAL [] xref: TAO:0000252 xref: ZFIN:ZDB-ANAT-011113-183 is_a: ZFA:0000338 ! diencephalic white matter relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0000253 name: orbitosphenoid namespace: zebrafish_anatomy def: "Large median unpaired cartilage bone consisting of two diverging plates. Positioned medial to the eye. The orbitosphenoid develops from the Trabeculae communis and forms the anterior and anterolateral boundary of the orbital foramen and constitutes a significant part of the sidewalls and floor of the cranial cavity. Bordered by the lateral ethmoid anteriorly, and the pterosphenoid posteriorly, The orbitosphenoid may extend ventrally to meet the parasphenoid. In the adult, the orbitosphenoid is fused ventrally to the parasphenoid via a thin sheet of bone." [ZFIN:curator] synonym: "orbitosphenoids" EXACT PLURAL [] xref: TAO:0000253 xref: ZFIN:ZDB-ANAT-011113-184 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001505 ! taenia marginalis anterior relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000290 ! sphenoid region relationship: part_of ZFA:0001424 ! chondrocranium relationship: part_of ZFA:0001580 ! neurocranium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000254 name: pancreas primordium namespace: zebrafish_anatomy xref: TAO:0000254 xref: ZFIN:ZDB-ANAT-011113-185 is_a: ZFA:0001105 ! embryonic structure relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0001371 ! pancreatic system relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000255 name: paraxial mesoderm namespace: zebrafish_anatomy alt_id: ZFA:0000942 def: "Mesoderm which is lateral to the neural tube on both sides." [ZFIN:curator] synonym: "paraxial mesenchyme" RELATED [] xref: TAO:0000255 xref: ZFIN:ZDB-ANAT-011113-186 is_a: ZFA:0000041 ! mesoderm is_a: ZFA:0000081 ! trunk mesenchyme relationship: develops_from ZFA:0000591 ! presumptive paraxial mesoderm relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0000256 name: pars subcommissuralis of ventral telencephalon namespace: zebrafish_anatomy synonym: "pars subcommissuralis of V" EXACT [] xref: TAO:0000256 xref: ZFIN:ZDB-ANAT-011113-187 is_a: ZFA:0001660 ! telencephalic nucleus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000304 ! ventral telencephalon relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000257 name: pectoral fin cartilage namespace: zebrafish_anatomy def: "Cartilage which is part of the pectoral fin." [ZFIN:curator] synonym: "pectoral fin cartilages" EXACT PLURAL [] xref: TAO:0000257 xref: ZFIN:ZDB-ANAT-011113-188 is_a: ZFA:0001543 ! paired fin cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000943 ! pectoral fin skeleton relationship: start ZFS:0000032 ! Pharyngula:High-pec [Term] id: ZFA:0000258 name: pelvic fin musculature namespace: zebrafish_anatomy xref: TAO:0000258 xref: ZFIN:ZDB-ANAT-011113-189 is_a: ZFA:0000207 ! fin musculature relationship: develops_from ZFA:0001449 ! mesenchyme pelvic fin relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001184 ! pelvic fin relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000259 name: mandibular lateral line namespace: zebrafish_anatomy def: "One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator] synonym: "mandibular lateral lines" EXACT PLURAL [] synonym: "mandibular line" EXACT [ZFIN:ZDB-PUB-000523-3] xref: TAO:0000259 xref: ZFIN:ZDB-ANAT-011113-19 is_a: ZFA:0001469 ! lateral line relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001470 ! anterior lateral line relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0000260 name: periventricular nucleus namespace: zebrafish_anatomy def: "Diencephalic nucleus which is the periventricular part of the ventral hypothalamic zone. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] synonym: "periventricular nuclei" EXACT PLURAL [] synonym: "ventral zone of periventricular hypothalamus" EXACT [] xref: TAO:0000260 xref: ZFIN:ZDB-ANAT-011113-190 is_a: ZFA:0001659 ! diencephalic nucleus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000707 ! ventral hypothalamic zone relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000261 name: pharyngohyoid namespace: zebrafish_anatomy xref: TAO:0000261 xref: ZFIN:ZDB-ANAT-011113-191 is_a: ZFA:0000172 ! branchial muscle relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000262 name: posterior semicircular canal namespace: zebrafish_anatomy alt_id: ZFA:0000483 def: "One of three fluid-filled toroidal spaces, arranged orthogonally to each other in each ear, that detect angular acceleration. (See Anatomical Atlas entry for semicircular canals by T. Whitfield.)" [ZFIN:curator] synonym: "caudal vertical semicircular canal" EXACT [] synonym: "posterior semicircular canals" EXACT PLURAL [] synonym: "posterior semicircular duct" EXACT [] xref: TAO:0000262 xref: ZFIN:ZDB-ANAT-011113-192 is_a: ZFA:0000431 ! semicircular canal relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000032 ! Pharyngula:High-pec [Term] id: ZFA:0000263 name: precaudal vertebra namespace: zebrafish_anatomy def: "Post-cranial vertebrae lacking hemal spines (Weitzman, 1962), refers generally to the anterior vertebral region bounding the abdominal cavity. Alternate but not quite synonymous terms are abdominal or trunk vertebrae, which bear parapophyses and ribs. In many actinopterygians dorsal to the posterior abdominal cavity there are transitional vertebrae lacking ribs but also without hemal spines or sometimes even enclosed hemal arches. The primary definition would identify these vertebrae as precaudal." [ZFIN:ZDB-PUB-031103-13] synonym: "abdominal vertebra" RELATED [] synonym: "precaudal vertebrae" EXACT PLURAL [] synonym: "trunk vertebra" RELATED [] xref: TAO:0000263 xref: ZFIN:ZDB-ANAT-011113-193 is_a: ZFA:0001189 ! vertebra relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001115 ! trunk relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000264 name: preopercle namespace: zebrafish_anatomy def: "Dermal bone that is part of the opercular flap and bears the preopercular sensory canal. The preopercle is a paired bone and typically L-shaped, with the horizontal limb overlying the interopercle and the vertical limb overlying the opercle." [ZFIN:curator] synonym: "preopercles" EXACT PLURAL [] xref: TAO:0000264 xref: ZFIN:ZDB-ANAT-011113-194 is_a: ZFA:0001590 ! dermal bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000555 ! opercular flap relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001401 ! dorsal hyoid arch relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000265 name: presumptive dorsal mesoderm namespace: zebrafish_anatomy xref: TAO:0000265 xref: ZFIN:ZDB-ANAT-011113-195 is_a: ZFA:0001377 ! presumptive mesoderm relationship: end ZFS:0000019 ! Gastrula:Shield relationship: start ZFS:0000014 ! Blastula:Sphere [Term] id: ZFA:0000266 name: pretecto-mamillary tract namespace: zebrafish_anatomy synonym: "pretectomamillary tract" EXACT [] xref: TAO:0000266 xref: ZFIN:ZDB-ANAT-011113-196 is_a: ZFA:0000338 ! diencephalic white matter relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000267 name: primary olfactory fiber layer namespace: zebrafish_anatomy def: "Portion of tissue which is the most peripheral layer and present only in the rostroventral olfactory bulb. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] synonym: "stratum nervosum bulbi olfactorii" EXACT [] xref: TAO:0000267 xref: ZFIN:ZDB-ANAT-011113-197 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000402 ! olfactory bulb relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000268 name: anal fin proximal radial namespace: zebrafish_anatomy def: "Rod-like internal median skeletal support bones of the anal fin, which articulate with the distal radials." [ZFIN:curator] synonym: "anal fin proximal radials" EXACT PLURAL [] xref: TAO:0000268 xref: ZFIN:ZDB-ANAT-011113-199 is_a: ZFA:0001646 ! anal fin radial relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001420 ! anal fin pterygiophore relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000269 name: inferior ventral flexor namespace: zebrafish_anatomy xref: TAO:0000269 xref: ZFIN:ZDB-ANAT-011113-2 is_a: ZFA:0005271 ! flexor muscle relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000628 ! caudal fin musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000270 name: maxilla namespace: zebrafish_anatomy def: "The dermal maxilla forms part of the upper jaw. It is first visible as a small dorsoventrally oriented rod of bone in the lateral region of the upper jaw. Through anterior ossification it becomes S-shaped, with its anteriormost tip directed medially (4.8 mm NL). The posteroventral end of the maxilla is connected to the dentary by a ligament. Maxillary teeth are absent in cypriniforms, but are present in other ostariophysans. Two barbels are present on the maxilla. The presence of two pairs of maxillary barbels is considered by Cavender and Coburn (1992) to be the primitive condition for the Cyprinidae." [ZFIN:curator] synonym: "maxillae" EXACT PLURAL [] xref: TAO:0000270 xref: ZFIN:ZDB-ANAT-011113-20 is_a: ZFA:0001590 ! dermal bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001272 ! palatoquadrate arch relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000271 name: radial namespace: zebrafish_anatomy def: "The internal skeletal supports of the median and paired fins." [TAO:curator] synonym: "radials" EXACT PLURAL [] xref: TAO:0000271 xref: ZFIN:ZDB-ANAT-011113-200 is_a: ZFA:0001591 ! endochondral bone relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000272 name: respiratory system namespace: zebrafish_anatomy xref: TAO:0000272 xref: ZFIN:ZDB-ANAT-011113-201 is_a: ZFA:0001439 ! anatomical system relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000274 name: rostral octaval nucleus namespace: zebrafish_anatomy def: "Octaval sensory nucleus located rostral to the magnocellular octaval nucleus and arches dorsally around the descending trigeminal root. Receives some vestibular information and is part of the vestibulo-ocular reflex circuitry and projects to abducens and oculomotor nuclei and descends to the spinal cord. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] synonym: "anterior octaval nucleus" EXACT [] synonym: "nucleus octavus anterior" EXACT [] xref: TAO:0000274 xref: ZFIN:ZDB-ANAT-011113-204 is_a: ZFA:0000401 ! octaval nerve sensory nucleus relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000275 name: rostral tegmental nucleus namespace: zebrafish_anatomy xref: TAO:0000275 xref: ZFIN:ZDB-ANAT-011113-205 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000160 ! tegmentum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000276 name: rostrolateral thalamic nucleus of Butler & Saidel namespace: zebrafish_anatomy xref: TAO:0000276 xref: ZFIN:ZDB-ANAT-011113-206 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000458 ! ventral thalamus relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000277 name: scale namespace: zebrafish_anatomy def: "Dermal bone that is thin, flexible, and platelike, and that develops in overlapping skinfolds that cover the body and often the head of fish and the bases of the fins." [TAO:curator] synonym: "scales" EXACT PLURAL [] xref: TAO:0000277 xref: ZFIN:ZDB-ANAT-011113-207 is_a: ZFA:0000292 ! surface structure relationship: develops_from ZFA:0001704 ! scale primordium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001183 ! dermal superficial region relationship: start ZFS:0000042 ! Juvenile:Days 30-44 [Term] id: ZFA:0000278 name: secondary gustatory nucleus medulla oblongata namespace: zebrafish_anatomy xref: TAO:0000278 xref: ZFIN:ZDB-ANAT-011113-208 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000545 ! medulla oblongata relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000279 name: segmental plate namespace: zebrafish_anatomy def: "Unsegmented field of paraxial mesoderm present posterior to the most recently formed somite pair, from which somites will form." [ZFIN:ZDB-PUB-961014-576] synonym: "presomitic mesoderm" EXACT [] synonym: "PSM" EXACT [] xref: TAO:0000279 xref: ZFIN:ZDB-ANAT-011113-209 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0000255 ! paraxial mesoderm relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0000280 name: medial valvula cerebelli namespace: zebrafish_anatomy def: "Medial division of the valvula cerebelli." [ZFIN:curator] synonym: "medial division" EXACT [] synonym: "valvula cerebelli, pars medialis" EXACT [] xref: TAO:0000280 xref: ZFIN:ZDB-ANAT-011113-21 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000603 ! valvula cerebelli relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000281 name: hair cell posterior macula namespace: zebrafish_anatomy def: "Specialized neuronal receptor cells of the lateral line and acoustico-vestibular systems. (Also see Anatomical Atlas entry for hair cells by T. Whitfield.)" [ZFIN:ZDB-PUB-961014-576] synonym: "sensory hair cells posterior macula" EXACT PLURAL [] xref: TAO:0000281 xref: ZFIN:ZDB-ANAT-011113-210 is_a: ZFA:0009366 ! hair cell relationship: develops_from ZFA:0001099 ! immature hair cell posterior macula relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000558 ! posterior macula relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000282 name: sensory system namespace: zebrafish_anatomy synonym: "sensory systems" EXACT PLURAL [] xref: TAO:0000282 xref: ZFIN:ZDB-ANAT-011113-211 is_a: ZFA:0001439 ! anatomical system relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000396 ! nervous system relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0000283 name: sternohyoid namespace: zebrafish_anatomy synonym: "sternohyoids" EXACT PLURAL [] xref: TAO:0000283 xref: ZFIN:ZDB-ANAT-011113-212 is_a: ZFA:0000236 ! mandibular muscle relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000284 name: subopercle namespace: zebrafish_anatomy def: "Dermal bone lying below the opercle. The subopercle is a paired bone." [ZFIN:curator] synonym: "subopercles" EXACT PLURAL [] xref: TAO:0000284 xref: ZFIN:ZDB-ANAT-011113-213 is_a: ZFA:0001590 ! dermal bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000555 ! opercular flap relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001401 ! dorsal hyoid arch relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000285 name: superficial adductor namespace: zebrafish_anatomy synonym: "adductor superficialis" EXACT [ZFIN:ZDB-PUB-050920-7] synonym: "superficial adductors" EXACT PLURAL [] xref: TAO:0000285 xref: ZFIN:ZDB-ANAT-011113-214 is_a: ZFA:0005268 ! adductor muscle relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000563 ! pectoral fin musculature relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0000286 name: superficial lateralis namespace: zebrafish_anatomy xref: TAO:0000286 xref: ZFIN:ZDB-ANAT-011113-215 is_a: ZFA:0005145 ! muscle relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000473 ! trunk musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000287 name: superior dorsal flexor namespace: zebrafish_anatomy xref: TAO:0000287 xref: ZFIN:ZDB-ANAT-011113-216 is_a: ZFA:0005271 ! flexor muscle relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000628 ! caudal fin musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000288 name: supracarinalis namespace: zebrafish_anatomy xref: TAO:0000288 xref: ZFIN:ZDB-ANAT-011113-217 is_a: ZFA:0005145 ! muscle relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000473 ! trunk musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000289 name: supramaxillae namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-218 is_obsolete: true [Term] id: ZFA:0000290 name: sphenoid region namespace: zebrafish_anatomy def: "Anatomical cluster that forms the floor and sidewalls of the middle part of the cranium." [ZFIN:curator] xref: TAO:0000290 xref: ZFIN:ZDB-ANAT-011113-219 is_a: ZFA:0001478 ! anatomical cluster relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000737 ! cranium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000291 name: medial octavolateralis nucleus namespace: zebrafish_anatomy synonym: "medial octavolateralis nuclei" EXACT PLURAL [] xref: TAO:0000291 xref: ZFIN:ZDB-ANAT-011113-22 is_a: ZFA:0000381 ! lateral line sensory nuclei relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000292 name: surface structure namespace: zebrafish_anatomy def: "Organism subdivision which is the collection of anatomical structures on the body surface." [ZFIN:curator] synonym: "surface structures" EXACT PLURAL [] xref: TAO:0000292 xref: ZFIN:ZDB-ANAT-011113-220 is_a: ZFA:0001308 ! organism subdivision relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0000293 name: synencephalon namespace: zebrafish_anatomy def: "Multi-tissue structure that is located between the dorsal diencephalon and the mesencephalon and contains the caudal commissure. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] xref: TAO:0000293 xref: ZFIN:ZDB-ANAT-011113-221 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000101 ! diencephalon relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000294 name: torus lateralis namespace: zebrafish_anatomy def: "Diencephalic nucleus which is part of the caudal tuberculum. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] synonym: "lateral torus" EXACT [] xref: TAO:0000294 xref: ZFIN:ZDB-ANAT-011113-222 is_a: ZFA:0001659 ! diencephalic nucleus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000633 ! caudal tuberculum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000295 name: trigeminal ganglion namespace: zebrafish_anatomy def: "A prominent collection of touch-sensory neurons of the trigeminal or fifth cranial nerve, positioned beside the brain between the eye and the ear." [ZFIN:ZDB-PUB-961014-576] synonym: "5th ganglion" EXACT [] synonym: "fifth ganglion" EXACT [] synonym: "gV" EXACT [] synonym: "trigeminal ganglia" EXACT PLURAL [] xref: TAO:0000295 xref: ZFIN:ZDB-ANAT-011113-223 is_a: ZFA:0000013 ! cranial ganglion relationship: develops_from ZFA:0000080 ! trigeminal neural crest relationship: develops_from ZFA:0000162 ! trigeminal placode relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000296 name: uncrossed tecto-bulbar tract namespace: zebrafish_anatomy xref: TAO:0000296 xref: ZFIN:ZDB-ANAT-011113-225 is_a: ZFA:0000446 ! tecto-bulbar tract relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000297 name: motor nucleus of vagal nerve namespace: zebrafish_anatomy alt_id: ZFA:0000387 synonym: "motor nucleus X" EXACT [] synonym: "nucleus motorius of nervi vagi" EXACT [] synonym: "nX" EXACT [] synonym: "vagal lobe" RELATED [] xref: TAO:0000297 xref: ZFIN:ZDB-ANAT-011113-226 is_a: ZFA:0001658 ! hindbrain nucleus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000545 ! medulla oblongata relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000298 name: vent namespace: zebrafish_anatomy xref: TAO:0000298 xref: ZFIN:ZDB-ANAT-011113-227 is_a: ZFA:0000292 ! surface structure relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000299 name: ventral entopeduncular nucleus of ventral telencephalon namespace: zebrafish_anatomy def: "Peripheral nucleus of the ventral telencephalon that is a band of tightly packed cells starting at the level of the anterior commissure and extends into the telencephalo-diencephalic boundary region. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] synonym: "endopeduncular nucleus, ventral part" EXACT [] synonym: "entopeduncular nucleus, ventral part" EXACT [] synonym: "ENv" EXACT [] synonym: "nucleus entopeduncularis, pars ventralis" EXACT [] synonym: "ventral entopeduncular nucleus V" EXACT [] xref: TAO:0000299 xref: ZFIN:ZDB-ANAT-011113-228 is_a: ZFA:0001660 ! telencephalic nucleus is_a: ZFA:0001667 ! peripheral nucleus of ventral telencephalon relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000300 name: ventral hypohyal bone namespace: zebrafish_anatomy def: "The ventral hypohyal ossifies first along the anteroventral tip of the ceratohyal cartilage at the insertion of the tendon from the sternohyoideus (5.7 mm)." [ZFIN:curator] synonym: "lower hypohyal" EXACT [] synonym: "ventrohyal" EXACT [] xref: TAO:0000300 xref: ZFIN:ZDB-ANAT-011113-229 is_a: ZFA:0001381 ! hypohyal bone relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000301 name: medial rectus namespace: zebrafish_anatomy synonym: "medial recti" EXACT PLURAL [] xref: TAO:0000301 xref: ZFIN:ZDB-ANAT-011113-23 is_a: ZFA:0005145 ! muscle relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000511 ! extraocular musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000302 name: ventral nucleus namespace: zebrafish_anatomy xref: TAO:0000302 xref: ZFIN:ZDB-ANAT-011113-230 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000213 ! habenula relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000303 name: female organism namespace: zebrafish_anatomy def: "Gonochoristic organism that can produce female gametes." [ZFIN:curator] xref: CARO:0000028 xref: TAO:0000303 xref: ZFIN:ZDB-ANAT-061101-4 is_a: ZFA:0001094 ! whole organism relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000001 ! Zygote:1-cell [Term] id: ZFA:0000304 name: ventral telencephalon namespace: zebrafish_anatomy def: "Brain structure which is the ventral part of the telencephalon and is consists of periventricular nuclei surrounding the unpaired median ventricle and those which have migrated away from the ependyma. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] synonym: "area ventralis telencephali" EXACT [] synonym: "subpallium" EXACT [] xref: TAO:0000304 xref: ZFIN:ZDB-ANAT-011113-232 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000079 ! telencephalon relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000305 name: ventral sulcus namespace: zebrafish_anatomy def: "Groove that separates the paired inferior (or lateral) lobes of the hypothalamus from the tuberal hypothalamus." [http:en.wikipedia.org/wiki/Hypothalamic_sulcus] synonym: "hypothalamic sulcus" RELATED [] xref: TAO:0000305 xref: ZFIN:ZDB-ANAT-011113-233 is_a: ZFA:0001690 ! groove relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000032 ! hypothalamus relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000306 name: ventrolateral thalamic nucleus namespace: zebrafish_anatomy xref: TAO:0000306 xref: ZFIN:ZDB-ANAT-011113-234 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000458 ! ventral thalamus relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000307 name: vestibulolateralis lobe namespace: zebrafish_anatomy def: "Brain structure which is part of the cerebellum consists of the paired granular eminentia and the medial caudal lobe. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] xref: TAO:0000307 xref: ZFIN:ZDB-ANAT-011113-235 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000100 ! cerebellum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000308 name: prevomer namespace: zebrafish_anatomy def: "A thin medial unpaired dermal bone that is kite or paddle-shape. Underlying the ethmoid, and slightly overlapping the parasphenoid posteriorly, the prevomer bears an anterolateral projection that terminates in a concave depression in which the preethmoids sit." [ZFIN:curator] synonym: "vomer" EXACT [ZFIN:ZDB-PUB-961014-192] xref: TAO:0000308 xref: ZFIN:ZDB-ANAT-011113-236 is_a: ZFA:0001590 ! dermal bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000351 ! olfactory region relationship: part_of ZFA:0000863 ! dermatocranium relationship: start ZFS:0000041 ! Larval:Days 21-29 [Term] id: ZFA:0000309 name: E-YSL namespace: zebrafish_anatomy def: "The portion of the YSL that is outside of the blastoderm margin during epiboly." [ZFIN:ZDB-PUB-961014-576] synonym: "external yolk syncytial layer" EXACT [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000309 xref: ZFIN:ZDB-ANAT-011113-237 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000030 ! Pharyngula:Prim-15 relationship: part_of ZFA:0000088 ! YSL relationship: start ZFS:0000013 ! Blastula:Oblong [Term] id: ZFA:0000310 name: cranial nerve VI namespace: zebrafish_anatomy def: "Cranial nerve which exits the medulla oblongata and controls the lateral movement of the eye. The caudal and rostral roots fuse together and course rostrally once they are outside the brainstem. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] synonym: "abducens nerve" EXACT [] synonym: "CN-VI" EXACT [] synonym: "nervus abducens" EXACT [] xref: TAO:0000310 xref: ZFIN:ZDB-ANAT-011113-238 is_a: ZFA:0000641 ! cranial nerve relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000311 name: adductor mandibulae complex namespace: zebrafish_anatomy def: "Is a mandibular muscle that consists of three subdivisions A1, A2, and A3. All three originate on the hyomandibula and suspensorium but each has a distinct insertion. A1 inserts on the maxilla, A2 inserts along the caudal margin of the articular and A3 inserts on the medial surface of the articular." [ZFIN:ZDB-PUB-070330-4] xref: TAO:0000311 xref: ZFIN:ZDB-ANAT-011113-239 is_a: ZFA:0005268 ! adductor muscle relationship: develops_from ZFA:0007049 ! adductor mandibulae relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000042 ! Juvenile:Days 30-44 [Term] id: ZFA:0000312 name: mesencephalic nucleus of trigeminal nerve namespace: zebrafish_anatomy synonym: "mesencephalic nuclei of trigeminal nerves" EXACT PLURAL [] xref: TAO:0000312 xref: ZFIN:ZDB-ANAT-011113-24 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000433 ! sensory trigeminal nucleus relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000313 name: anal inclinator namespace: zebrafish_anatomy synonym: "anal inclinators" EXACT PLURAL [] xref: TAO:0000313 xref: ZFIN:ZDB-ANAT-011113-240 is_a: ZFA:0005276 ! inclinator muscle relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001154 ! anal fin musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000314 name: anterior semicircular canal namespace: zebrafish_anatomy alt_id: ZFA:0000675 def: "One of three fluid-filled toroidal spaces, arranged orthogonally to each other in each ear, that detect angular acceleration. (See Anatomical Atlas entry for semicircular canals by T. Whitfield.)" [ZFIN:curator] synonym: "anterior semicircular canals" EXACT PLURAL [] synonym: "anterior semicircular duct" EXACT [] synonym: "rostral vertical semicircular canal" EXACT [] xref: TAO:0000314 xref: ZFIN:ZDB-ANAT-011113-241 is_a: ZFA:0000431 ! semicircular canal relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000032 ! Pharyngula:High-pec [Term] id: ZFA:0000315 name: asteriscus namespace: zebrafish_anatomy def: "Otolith part of lagena." [ZFIN:ZDB-PUB-020403-4] synonym: "lagenar otolith" EXACT [] synonym: "lagenolith" EXACT [] xref: TAO:0000315 xref: ZFIN:ZDB-ANAT-011113-242 is_a: ZFA:0001617 ! otolith relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000374 ! lagena relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000316 name: basihyal bone namespace: zebrafish_anatomy def: "Endochondral bone that is median and is the anterior-most bone of the ventral hyoid arch, the 'tongue' of the a fish. Ossification of the cartilaginous basihyal is first visible at the posterior end of the club-shaped basihyal cartilage (6.0 mm). Ossification spreads throughout the cartilage, except for the anterior tip, which remains cartilaginous. The posteroventral tip extends between the left and right dorsal hypohyals." [ZFIN:curator] synonym: "basihyoid" EXACT [] synonym: "glossohyal" EXACT [] xref: TAO:0000316 xref: ZFIN:ZDB-ANAT-011113-243 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001510 ! basihyal cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001402 ! ventral hyoid arch relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000317 name: postcranial axial skeleton namespace: zebrafish_anatomy def: "The post-cranial structural components forming the long axis of the vertebrate body; in Danio, consisting of the notochord, vertebrae, ribs, supraneurals, intermuscular bones, and unpaired median fins." [ZFIN:curator] synonym: "axial skeleton" EXACT [] xref: TAO:0000317 xref: ZFIN:ZDB-ANAT-011113-244 is_a: ZFA:0000434 ! skeletal system relationship: develops_from ZFA:0001080 ! sclerotome relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000318 name: brainstem and spinal white matter namespace: zebrafish_anatomy def: "CNS white matter that is part of the brain stem or spinal cord." [ZFIN:curator] synonym: "brain stem and spinal tract/commissure" EXACT [] synonym: "brain stem/spinal tracts and commissures" EXACT PLURAL [] xref: TAO:0000318 xref: ZFIN:ZDB-ANAT-011113-245 is_a: ZFA:0000145 ! CNS white matter relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001707 ! brainstem relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000319 name: branchiostegal membrane def: "The portion of tissue forming the membrane connecting the branchiostegals and enclosing the gill chamber." [http:www.fishbase.org/glossary/Glossary.php?q=branchiostegal+membrane] synonym: "branchiostegal membranes" EXACT PLURAL [] xref: TAO:0000319 xref: ZFIN:ZDB-ANAT-011113-246 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000354 ! gill relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000320 name: caudal commissure namespace: zebrafish_anatomy def: "Diencephalic tract which is located in the vicinity of the dorsal diencephalon and mesencephalon and connects the pretectal nuclei. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] synonym: "posterior commissure" EXACT [] xref: TAO:0000320 xref: ZFIN:ZDB-ANAT-011113-247 is_a: ZFA:0000338 ! diencephalic white matter relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000293 ! synencephalon relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000321 name: caudal levator namespace: zebrafish_anatomy synonym: "caudal levators" EXACT PLURAL [] xref: TAO:0000321 xref: ZFIN:ZDB-ANAT-011113-248 is_a: ZFA:0000172 ! branchial muscle relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000322 name: caudal octaval nucleus namespace: zebrafish_anatomy synonym: "caudal octaval nuclei" EXACT PLURAL [] xref: TAO:0000322 xref: ZFIN:ZDB-ANAT-011113-249 is_a: ZFA:0000401 ! octaval nerve sensory nucleus relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000323 name: mesethmoid bone namespace: zebrafish_anatomy def: "Median unpaired cartilage bone that ossifies as a perichondral lamellae ensheathing the nasal septum anterodorsally and laterally (Harrington, 1955). In adult D. rerio, the center of the mesethmoid remains cartilaginous (Cubbage & Mabee, 1996). The mesethmoid meets the supraethmoid dorsally, the lateral ethmoids posterolaterally, and the vomer and parasphenoid ventrally in synostoses. Anterolaterally the mesethmoid meets the preethmoids in synchondroses." [ZFIN:curator] synonym: "ethmoid bone" EXACT [] xref: TAO:0000323 xref: ZFIN:ZDB-ANAT-011113-25 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001321 ! neurocranial trabecula relationship: develops_from ZFA:0001405 ! ethmoid cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000351 ! olfactory region relationship: part_of ZFA:0001424 ! chondrocranium relationship: part_of ZFA:0001580 ! neurocranium relationship: start ZFS:0000041 ! Larval:Days 21-29 [Term] id: ZFA:0000324 name: caudal periventricular hypothalamus namespace: zebrafish_anatomy def: "Diencephalic nucleus which is part of the caudal hypothalamus and surrounds the paired posterior ventricular recesses of the third ventricle. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] synonym: "caudal zone of periventricular hypothalamus" EXACT [] synonym: "nucleus periventricularis hypothalami, zona caudalis" EXACT [] xref: TAO:0000324 xref: ZFIN:ZDB-ANAT-011113-250 is_a: ZFA:0001659 ! diencephalic nucleus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000634 ! caudal hypothalamic zone relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000325 name: caudal thalamic nucleus namespace: zebrafish_anatomy def: "Diencephalic nucleus which is part of the caudal tuberculum. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] synonym: "posterior thalamic nucleus" EXACT [] xref: TAO:0000325 xref: ZFIN:ZDB-ANAT-011113-251 is_a: ZFA:0001659 ! diencephalic nucleus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000633 ! caudal tuberculum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000326 name: caudal vertebra namespace: zebrafish_anatomy def: "Vertebra bearing a hemal arch and spine. The most posterior caudal vertebrae support the caudal fin and are referred to as preural vertebrae." [ZFIN:curator] synonym: "caudal vertebrae" EXACT PLURAL [] xref: TAO:0000326 xref: ZFIN:ZDB-ANAT-011113-252 is_a: ZFA:0001189 ! vertebra relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000327 name: central zone namespace: zebrafish_anatomy xref: TAO:0000327 xref: ZFIN:ZDB-ANAT-011113-254 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000445 ! optic tectum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000328 name: cephalic musculature namespace: zebrafish_anatomy synonym: "head muscles" RELATED [] xref: TAO:0000328 xref: ZFIN:ZDB-ANAT-011113-255 is_a: ZFA:0000548 ! musculature system relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0000329 name: chorion namespace: zebrafish_anatomy def: "The egg shell." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000329 xref: ZFIN:ZDB-ANAT-011113-256 is_a: ZFA:0000020 ! extraembryonic structure relationship: end ZFS:0000032 ! Pharyngula:High-pec relationship: start ZFS:0000001 ! Zygote:1-cell [Term] id: ZFA:0000330 name: cloacal chamber namespace: zebrafish_anatomy xref: TAO:0000330 xref: ZFIN:ZDB-ANAT-011113-257 is_a: ZFA:0001643 ! anatomical space relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000112 ! gut relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000331 name: commissure infima of Haller namespace: zebrafish_anatomy synonym: "commissura infima Halleri" EXACT [] synonym: "commissura infima of Haller" EXACT [] xref: TAO:0000331 xref: ZFIN:ZDB-ANAT-011113-258 is_a: ZFA:0000318 ! brainstem and spinal white matter relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000332 name: coracoid namespace: zebrafish_anatomy def: "Endochondral bone that articulates dorsally with the scapula and with the mesocoracoid when the latter is present, posteriorly with the lower two or three proximal radials and antero-ventrally with the cleithrum. The coracoid develops from the scapulo-coracoid cartilage. The coracoid is paired." [TAO:curator] synonym: "coracoids" EXACT PLURAL [] synonym: "scapulocoracoid" RELATED [] xref: TAO:0000332 xref: ZFIN:ZDB-ANAT-011113-259 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001455 ! scapulocoracoid relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000407 ! pectoral girdle relationship: start ZFS:0000040 ! Larval:Days 14-20 [Term] id: ZFA:0000333 name: mesovarium namespace: zebrafish_anatomy xref: TAO:0000333 xref: ZFIN:ZDB-ANAT-011113-26 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000403 ! ovary relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000334 name: corpus mamillare namespace: zebrafish_anatomy def: "Brain structure which is located ventrolaterally to the caudal preglomerular nucleus and in the dorsomedial aspect of the caudal protrusion of the inferior lobe of the hypothalamus. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] synonym: "mammillary body" EXACT [] xref: TAO:0000334 xref: ZFIN:ZDB-ANAT-011113-260 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000633 ! caudal tuberculum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000335 name: crossed tecto-bulbar tract namespace: zebrafish_anatomy synonym: "tractus tectobulbaris cruciatus" EXACT [] xref: TAO:0000335 xref: ZFIN:ZDB-ANAT-011113-261 is_a: ZFA:0000446 ! tecto-bulbar tract relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000336 name: hypural arches namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-262 is_obsolete: true [Term] id: ZFA:0000337 name: dermopalatine namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-263 is_obsolete: true [Term] id: ZFA:0000338 name: diencephalic white matter namespace: zebrafish_anatomy def: "CNS white matter that is part of the diencephalon." [ZFIN:curator] synonym: "diencephalic tract/commissure" EXACT [] xref: TAO:0000338 xref: ZFIN:ZDB-ANAT-011113-264 is_a: ZFA:0000145 ! CNS white matter relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000101 ! diencephalon relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000339 name: digestive system namespace: zebrafish_anatomy xref: TAO:0000339 xref: ZFIN:ZDB-ANAT-011113-265 is_a: ZFA:0001439 ! anatomical system relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000340 name: dorsal entopeduncular nucleus of ventral telencephalon namespace: zebrafish_anatomy def: "Peripheral nucleus of the ventral telencephalon which is a band of tightly packed cells starting at the level of the anterior commissure and disappearing more rostrally. May be homologous to the intermediate nucleus of the area ventralis of other species. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] synonym: "ENd" EXACT [] synonym: "endopeduncular nucleus, dorsal part" EXACT [] synonym: "entopeduncular nucleus, dorsal part" EXACT [] synonym: "nucleus entopeduncularis, pars dorsalis" EXACT [] xref: TAO:0000340 xref: ZFIN:ZDB-ANAT-011113-266 is_a: ZFA:0001660 ! telencephalic nucleus is_a: ZFA:0001667 ! peripheral nucleus of ventral telencephalon relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000341 name: dorsal flexor namespace: zebrafish_anatomy synonym: "dorsal flexors" EXACT PLURAL [] xref: TAO:0000341 xref: ZFIN:ZDB-ANAT-011113-267 is_a: ZFA:0005271 ! flexor muscle relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000628 ! caudal fin musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000342 name: dorsal inclinator namespace: zebrafish_anatomy synonym: "dorsal inclinators" EXACT PLURAL [] xref: TAO:0000342 xref: ZFIN:ZDB-ANAT-011113-268 is_a: ZFA:0005276 ! inclinator muscle relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000648 ! dorsal fin musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000343 name: dorsal nucleus of ventral telencephalon namespace: zebrafish_anatomy def: "Periventricular nucleus which lies rostral to the anterior commissure and is contiguous caudally with the supracommissural nucleus of the ventral telencephalon. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] synonym: "area ventralis telencephali, nucleus dorsalis" EXACT [] synonym: "dorsal division of ventral telencephalic area" RELATED [] synonym: "dorsal nucleus of V" EXACT [] xref: TAO:0000343 xref: ZFIN:ZDB-ANAT-011113-269 is_a: ZFA:0001666 ! periventricular nucleus of ventral telencephalon relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000344 name: middle lateral line namespace: zebrafish_anatomy def: "One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator] synonym: "middle lateral lines" EXACT PLURAL [] xref: TAO:0000344 xref: ZFIN:ZDB-ANAT-011113-27 is_a: ZFA:0001469 ! lateral line relationship: develops_from ZFA:0005118 ! middle lateral line primordium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001470 ! anterior lateral line relationship: part_of ZFA:0005114 ! middle lateral line system relationship: start ZFS:0000031 ! Pharyngula:Prim-25 [Term] id: ZFA:0000345 name: dorsal rectus namespace: zebrafish_anatomy synonym: "dorsal recti" EXACT PLURAL [] xref: TAO:0000345 xref: ZFIN:ZDB-ANAT-011113-270 is_a: ZFA:0005145 ! muscle relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000511 ! extraocular musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000346 name: dorsal tegmental nucleus namespace: zebrafish_anatomy synonym: "nucleus tegmentalis dorsalis" EXACT [] xref: TAO:0000346 xref: ZFIN:ZDB-ANAT-011113-271 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000160 ! tegmentum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000347 name: dorsal hypothalamic zone namespace: zebrafish_anatomy def: "Brain structure which is the dorsal most region of the hypothalamus and expands laterally and emerges caudal to the ventral zone and is separated from the median tuberal portion by a deep ventral sulcus. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] xref: TAO:0000347 xref: ZFIN:ZDB-ANAT-011113-272 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0006000 ! intermediate hypothalamus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000032 ! hypothalamus relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000348 name: duodenum namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-273 is_obsolete: true [Term] id: ZFA:0000349 name: epaxialis namespace: zebrafish_anatomy xref: TAO:0000349 xref: ZFIN:ZDB-ANAT-011113-274 is_a: ZFA:0005145 ! muscle relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000473 ! trunk musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000350 name: epipleural namespace: zebrafish_anatomy def: "Epipleurals lie below the horizontal septum and are posteroventrally directed. There are ossified epipleurals in certain ostariophysans. In many lower elopocephalan teleosts including ostariophysans the epipleural bones develop an anterodorsal branch so that they are forked proximally." [ZFIN:curator] synonym: "epipleurals" EXACT PLURAL [] xref: TAO:0000350 xref: ZFIN:ZDB-ANAT-011113-275 is_a: ZFA:0000526 ! intermuscular bone relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0000351 name: olfactory region namespace: zebrafish_anatomy def: "Anatomical cluster that is located in the anterior region of the cranium and provides structural support for the peripheral olfactory organ." [ZFIN:curator] synonym: "ethmoid region" EXACT [] xref: TAO:0000351 xref: ZFIN:ZDB-ANAT-011113-276 is_a: ZFA:0001478 ! anatomical cluster relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000737 ! cranium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000352 name: external cellular layer namespace: zebrafish_anatomy def: "Portion of tissue which is located between the glomerular layer and internal cellular layer of the olfactory bulb, and contains large mitral cells whose efferent axons form most of the lateral and medial olfactory tracts. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] synonym: "stratum cellulare externum bulbi olfactorii" EXACT [] xref: TAO:0000352 xref: ZFIN:ZDB-ANAT-011113-277 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000402 ! olfactory bulb relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000353 name: fasciculus retroflexus namespace: zebrafish_anatomy synonym: "habenulo-interpeduncular tract" EXACT [] synonym: "habenulointerpeduncular tract" EXACT [] synonym: "tractus habenulo-interpeduncularis" EXACT [] xref: TAO:0000353 xref: ZFIN:ZDB-ANAT-011113-278 is_a: ZFA:0000338 ! diencephalic white matter relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000354 name: gill namespace: zebrafish_anatomy def: "Compound organ that consists of gill filaments, gill lamellae, gill rakers and pharyngeal arches 3-7. The gills are responsible for primary gas exchange between the blood and the surrounding water." [http:www.briancoad.com/Dictionary/G.htm] synonym: "gills" EXACT PLURAL [] xref: TAO:0000354 xref: ZFIN:ZDB-ANAT-011113-279 is_a: ZFA:0000496 ! compound organ relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000272 ! respiratory system relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000355 name: roof plate midbrain region namespace: zebrafish_anatomy def: "Roof plate that is part of the midbrain." [ZFIN:curator] xref: TAO:0000355 xref: ZFIN:ZDB-ANAT-011113-28 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0007058 ! roof plate relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000356 name: gill raker namespace: zebrafish_anatomy def: "Dermal bone that is a small anterior projection present on all of pharyngeal arches 3-7. The rakers have epithelial denticles and both their gross and fine structure serves to retain food particles in the mouth." [http:www.briancoad.com/Dictionary/G.htm] synonym: "gill rakers" EXACT PLURAL [] xref: TAO:0000356 xref: ZFIN:ZDB-ANAT-011113-280 is_a: ZFA:0001590 ! dermal bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000357 name: glomerular layer namespace: zebrafish_anatomy def: "Portion of tissue which is located in between the primary olfactory fiber layer and the external cellular layer of the olfactory bulb. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] synonym: "stratum glomerulosum bulbi olfactorii" EXACT [] xref: TAO:0000357 xref: ZFIN:ZDB-ANAT-011113-281 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000402 ! olfactory bulb relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000358 name: granular layer corpus cerebelli namespace: zebrafish_anatomy def: "Portion of tissue which is the innermost layer of the corpus cerebelli and consists of small granule cells and larger Golgi cells. The granule cell receive excitatory input from the mossy fibers, and send parallel fibers to the molecular layer where they synapse with Purkinje cell dendrites." [ZFIN:curator] xref: TAO:0000358 xref: ZFIN:ZDB-ANAT-011113-282 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000188 ! corpus cerebelli relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000359 name: habenular commissure namespace: zebrafish_anatomy synonym: "commissura habenularum" EXACT [] xref: TAO:0000359 xref: ZFIN:ZDB-ANAT-011113-283 is_a: ZFA:0000338 ! diencephalic white matter relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000360 name: heart tube namespace: zebrafish_anatomy def: "Cavitated compound organ that will become the adult heart following looping morphogenesis and valve formation." [ZFIN:ZDB-PUB-010219-2] xref: TAO:0000360 xref: ZFIN:ZDB-ANAT-011113-284 is_a: ZFA:0001490 ! cavitated compound organ relationship: develops_from ZFA:0000149 ! primitive heart tube relationship: end ZFS:0000031 ! Pharyngula:Prim-25 relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000362 name: hypaxialis namespace: zebrafish_anatomy xref: TAO:0000362 xref: ZFIN:ZDB-ANAT-011113-287 is_a: ZFA:0005145 ! muscle relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000473 ! trunk musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000363 name: hypobranchial bone namespace: zebrafish_anatomy def: "Hypobranchials are the most medial of the bilaterally paired elements of the gill arches. Hypobranchial ossifications 1-3 (of 4) develop in the small hypobranchial cartilages that lie between the medial tips of the ceratobranchials and copula 2. The hypobranchials articulate anteromedially with the basibranchials." [ZFIN:curator] synonym: "hypobranchial bones" EXACT PLURAL [] xref: TAO:0000363 xref: ZFIN:ZDB-ANAT-011113-288 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001522 ! hypobranchial cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000364 name: hypural namespace: zebrafish_anatomy def: "Expanded and laterally flattened hemal arches and spines. They support the lepidotrichia of the caudal fin. The hypurals form ventral to the posterior tip of the dorsally-flexed notochord. In zebrafish condensation of the hypurals begins at approximately 6 dpf (4.1 mm NL, notochord length)." [ZFIN:ZDB-PUB-011008-1] synonym: "hyp" EXACT [] synonym: "hypuralia" EXACT [] synonym: "hypurals" EXACT PLURAL [] xref: TAO:0000364 xref: ZFIN:ZDB-ANAT-011113-289 is_a: ZFA:0000859 ! specialized hemal arch and spine relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000036 ! Larval:Day 4 [Term] id: ZFA:0000365 name: nasal bone namespace: zebrafish_anatomy def: "Paired dermal bones, likened to a bone tube, positioned lateral to the supraethmoid. Nasal bones are transversed by the anterior most part of the supraorbital canals and bear one neuromast foramen in zebrafish" [ZFIN:ZDB-PUB-961014-192] synonym: "nasal bones" EXACT PLURAL [] xref: TAO:0000365 xref: ZFIN:ZDB-ANAT-011113-29 is_a: ZFA:0001590 ! dermal bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000351 ! olfactory region relationship: part_of ZFA:0000863 ! dermatocranium relationship: start ZFS:0000041 ! Larval:Days 21-29 [Term] id: ZFA:0000366 name: inferior raphe nucleus namespace: zebrafish_anatomy synonym: "posterior raphe nucleus" EXACT [] xref: TAO:0000366 xref: ZFIN:ZDB-ANAT-011113-290 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001429 ! raphe nucleus relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000367 name: infraorbital bridge namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-291 is_obsolete: true [Term] id: ZFA:0000368 name: integument namespace: zebrafish_anatomy def: "The outer protective barrier that separates the animal from its aquatic environment." [ZFIN:ZDB-PUB-040726-12] synonym: "skin" EXACT [] xref: TAO:0000368 xref: ZFIN:ZDB-ANAT-011113-292 is_a: ZFA:0000292 ! surface structure relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0000369 name: intermandibularis namespace: zebrafish_anatomy def: "Is a mandibular muscle that develops into the ventral intermandibularis anterior and posterior muscles." [ZFIN:curator] synonym: "intermandibular muscle" RELATED [ZFIN:ZDB-PUB-060921-12] xref: TAO:0000369 xref: ZFIN:ZDB-ANAT-011113-293 is_a: ZFA:0000236 ! mandibular muscle relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000370 name: intermediate thalamic nucleus namespace: zebrafish_anatomy synonym: "intermediate thalamic nuclei" EXACT PLURAL [] xref: TAO:0000370 xref: ZFIN:ZDB-ANAT-011113-294 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000458 ! ventral thalamus relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000371 name: internal pharyngoclavicularis namespace: zebrafish_anatomy synonym: "internal pharyngoclavicularae" EXACT PLURAL [] xref: TAO:0000371 xref: ZFIN:ZDB-ANAT-011113-295 is_a: ZFA:0000172 ! branchial muscle relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000372 name: interpeduncular nucleus medulla oblongata namespace: zebrafish_anatomy xref: TAO:0000372 xref: ZFIN:ZDB-ANAT-011113-296 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000545 ! medulla oblongata relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000373 name: juvenile namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-297 is_obsolete: true [Term] id: ZFA:0000374 name: lagena namespace: zebrafish_anatomy def: "Otolith organ comprised of the macula lagena and asteriscus. The lagena is part of the pars inferior. The lagena functions in the detection of sound." [ZFIN:curator] synonym: "lagenas" EXACT PLURAL [] xref: TAO:0000374 xref: ZFIN:ZDB-ANAT-011113-298 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000559 ! otolith organ relationship: part_of ZFA:0005410 ! pars inferior ear relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000375 name: last preural centrum namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-299 is_obsolete: true [Term] id: ZFA:0000376 name: infraorbital namespace: zebrafish_anatomy alt_id: ZFA:0000489 def: "Dermal bone that is situated under or posterior to the eye and associated with the infraorbital sensory canal." [ZFIN:curator] xref: TAO:0000376 xref: ZFIN:ZDB-ANAT-011113-3 is_a: ZFA:0001590 ! dermal bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001410 ! orbital region relationship: start ZFS:0000040 ! Larval:Days 14-20 [Term] id: ZFA:0000379 name: lateral forebrain bundle diencephalon namespace: zebrafish_anatomy synonym: "lateral forebrain bundles diencephalon" EXACT PLURAL [] xref: TAO:0000379 xref: ZFIN:ZDB-ANAT-011113-301 is_a: ZFA:0000338 ! diencephalic white matter relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0007012 ! lateral forebrain bundle relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000380 name: lateral lemniscus nucleus namespace: zebrafish_anatomy synonym: "lateral lemniscus nuclei" EXACT PLURAL [] xref: TAO:0000380 xref: ZFIN:ZDB-ANAT-011113-302 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000160 ! tegmentum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000381 name: lateral line sensory nuclei namespace: zebrafish_anatomy synonym: "lateral line sensory nuclei" EXACT PLURAL [] xref: TAO:0000381 xref: ZFIN:ZDB-ANAT-011113-303 is_a: ZFA:0001658 ! hindbrain nucleus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000545 ! medulla oblongata relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000382 name: acellular anatomical structure namespace: zebrafish_anatomy def: "Anatomical structure that consists of cell parts and cell substances and together does not constitute a cell or a tissue." [ZFIN:curator] synonym: "acellular anatomical structures" EXACT PLURAL [] xref: CARO:0000040 xref: TAO:0000382 xref: ZFIN:ZDB-ANAT-061101-5 is_a: ZFA:0000037 ! anatomical structure relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000001 ! Zygote:1-cell [Term] id: ZFA:0000383 name: lateral rectus namespace: zebrafish_anatomy synonym: "lateral recti" EXACT PLURAL [] xref: TAO:0000383 xref: ZFIN:ZDB-ANAT-011113-305 is_a: ZFA:0005145 ! muscle relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000511 ! extraocular musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000384 name: levator arcus palatini namespace: zebrafish_anatomy def: "Mandibular muscle that inserts along the dorsolateral faces of the hyosymplectics." [ZFIN:ZDB-PUB-020703-2] synonym: "levators arcus palatini" EXACT PLURAL [] xref: TAO:0000384 xref: ZFIN:ZDB-ANAT-011113-307 is_a: ZFA:0000236 ! mandibular muscle relationship: develops_from ZFA:0007050 ! constrictor dorsalis relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000385 name: lymphatic system namespace: zebrafish_anatomy xref: TAO:0000385 xref: ZFIN:ZDB-ANAT-011113-308 is_a: ZFA:0000010 ! cardiovascular system relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000386 name: macula namespace: zebrafish_anatomy def: "Portion of tissue that is a patch of thickened, pseudostratified epithelium in the inner ear, consisting of regular arrays of sensory hair cells interspersed with supporting cells. Each patch has its own characteristic shape and polarity pattern. (See Anatomical Atlas entry for sensory patches of the ear by T. Whitfield.)" [ZFIN:curator] synonym: "maculae" EXACT PLURAL [] synonym: "sensory macula" EXACT [] synonym: "sensory patch" EXACT [] xref: TAO:0000386 xref: ZFIN:ZDB-ANAT-011113-309 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000217 ! inner ear relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000388 name: medial caudal lobe namespace: zebrafish_anatomy def: "Brain structure which is part of the vestibulolateralis lobe of the cerebellum. The medial caudal lobe receives primary octaval (presumably vestibular) as well as lateral line projections. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] synonym: "caudal lobe of cerebellum" EXACT [] synonym: "lobus caudalis cerebelli" EXACT [] xref: TAO:0000388 xref: ZFIN:ZDB-ANAT-011113-311 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000307 ! vestibulolateralis lobe relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000389 name: medial funicular nucleus medulla oblongata namespace: zebrafish_anatomy xref: TAO:0000389 xref: ZFIN:ZDB-ANAT-011113-312 is_a: ZFA:0001658 ! hindbrain nucleus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000545 ! medulla oblongata relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000390 name: medial preglomerular nucleus namespace: zebrafish_anatomy def: "Preglomerular nucleus which is located between the lateral and caudal preglomerular nuclei of the caudal tuberculum. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] synonym: "medial preglomerular nuclei" EXACT PLURAL [] xref: TAO:0000390 xref: ZFIN:ZDB-ANAT-011113-313 is_a: ZFA:0001662 ! preglomerular nucleus relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000391 name: medial zone of dorsal telencephalon namespace: zebrafish_anatomy def: "Telencephalic nucleus which is medially located and surrounds the central zone of dorsal telencephalon. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] synonym: "area dorsalis telencephali, zona medialis" EXACT [] synonym: "medial zone of D" EXACT [] synonym: "medial zone of dorsal telencephalic area" EXACT [] xref: TAO:0000391 xref: ZFIN:ZDB-ANAT-011113-314 is_a: ZFA:0001660 ! telencephalic nucleus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000505 ! dorsal telencephalon relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000392 name: median tuberal portion namespace: zebrafish_anatomy def: "Multi-tissue structure which is part of the hypothalamus and consists of caudal and ventral zones, and is separated from the dorsal hypothalamic zone by a deep ventral sulcus. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] xref: TAO:0000392 xref: ZFIN:ZDB-ANAT-011113-315 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000032 ! hypothalamus relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000393 name: mesenchyme namespace: zebrafish_anatomy def: "A mesh-like cell arrangement, less compact than an epithelium." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000393 xref: ZFIN:ZDB-ANAT-011113-316 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0000394 name: molecular layer corpus cerebelli namespace: zebrafish_anatomy def: "Portion of tissue which is the outermost layer of the corpus cerebelli and consists largely of axons and dendrites. Other cell types such as stellate and basket neurons are also found in the molecular layer." [ZFIN:curator] xref: TAO:0000394 xref: ZFIN:ZDB-ANAT-011113-317 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000188 ! corpus cerebelli relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000395 name: muscle pioneer somite 2 namespace: zebrafish_anatomy synonym: "muscle pioneers somite 2" EXACT PLURAL [] xref: TAO:0000395 xref: ZFIN:ZDB-ANAT-011113-318 is_a: ZFA:0001086 ! muscle pioneer relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000843 ! slow muscle cell somite 2 relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000396 name: nervous system namespace: zebrafish_anatomy def: "A regulatory system of the body that consists of neurons and neuroglial cells. The nervous system is divided into two parts, the central nervous system (CNS) and the peripheral nervous system (PNS)." [ZFIN:curator] xref: TAO:0000396 xref: ZFIN:ZDB-ANAT-011113-319 is_a: ZFA:0001439 ! anatomical system relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0000397 name: nucleus subglomerulosis namespace: zebrafish_anatomy def: "Diencephalic nucleus which is part of the caudal tuberculum. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] xref: TAO:0000397 xref: ZFIN:ZDB-ANAT-011113-32 is_a: ZFA:0001659 ! diencephalic nucleus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000633 ! caudal tuberculum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000398 name: nucleus isthmi namespace: zebrafish_anatomy xref: TAO:0000398 xref: ZFIN:ZDB-ANAT-011113-320 is_a: ZFA:0001658 ! hindbrain nucleus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000545 ! medulla oblongata relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000399 name: secondary gustatory nucleus trigeminal nuclei namespace: zebrafish_anatomy xref: TAO:0000399 xref: ZFIN:ZDB-ANAT-011113-321 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000433 ! sensory trigeminal nucleus relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000400 name: occipital lateral line namespace: zebrafish_anatomy def: "One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator] synonym: "supratemporal lateral line" EXACT [] xref: TAO:0000400 xref: ZFIN:ZDB-ANAT-011113-322 is_a: ZFA:0001469 ! lateral line relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001470 ! anterior lateral line relationship: start ZFS:0000036 ! Larval:Day 4 [Term] id: ZFA:0000401 name: octaval nerve sensory nucleus namespace: zebrafish_anatomy synonym: "cranial nerve VIII sensory nucleus" EXACT [] synonym: "octaval nerve sensory nuclei" EXACT PLURAL [] xref: TAO:0000401 xref: ZFIN:ZDB-ANAT-011113-323 is_a: ZFA:0001658 ! hindbrain nucleus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000545 ! medulla oblongata relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000402 name: olfactory bulb namespace: zebrafish_anatomy def: "Brain structure which is the paired anteriormost part of the telencephalon and are connected to the telencephalon by two tracts carrying secondary olfactory fibers. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] synonym: "bulbus olfactorius" EXACT [] synonym: "olfactory lobe" EXACT [] xref: TAO:0000402 xref: ZFIN:ZDB-ANAT-011113-324 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000079 ! telencephalon relationship: part_of ZFA:0001149 ! olfactory system relationship: start ZFS:0000032 ! Pharyngula:High-pec [Term] id: ZFA:0000403 name: ovary namespace: zebrafish_anatomy def: "Female reproductive organ." [ZFIN:curator] synonym: "ovaries" EXACT PLURAL [] xref: TAO:0000403 xref: ZFIN:ZDB-ANAT-011113-328 is_a: ZFA:0000413 ! gonad relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000303 ! female organism relationship: part_of ZFA:0001158 ! endocrine system relationship: start ZFS:0000041 ! Larval:Days 21-29 [Term] id: ZFA:0000404 name: paracommissural nucleus namespace: zebrafish_anatomy def: "Diencephalic nucleus that is part of the synencephalon and is located adjacent to the caudal commissure. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] xref: TAO:0000404 xref: ZFIN:ZDB-ANAT-011113-329 is_a: ZFA:0001659 ! diencephalic nucleus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000293 ! synencephalon relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000405 name: cranial nerve III namespace: zebrafish_anatomy synonym: "CN-III" EXACT [] synonym: "occulomotor" EXACT [] synonym: "oculomotor nerve" EXACT [] xref: TAO:0000405 xref: ZFIN:ZDB-ANAT-011113-33 is_a: ZFA:0000641 ! cranial nerve relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000160 ! tegmentum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000406 name: parvocellular superficial pretectal nucleus namespace: zebrafish_anatomy def: "Diencephalic nucleus that is part of the superficial pretectum. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] synonym: "parvocellular superficial pretectal nuclei" EXACT PLURAL [] xref: TAO:0000406 xref: ZFIN:ZDB-ANAT-011113-330 is_a: ZFA:0001659 ! diencephalic nucleus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000687 ! superficial pretectum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000407 name: pectoral girdle namespace: zebrafish_anatomy def: "Anatomical cluster of paired dermal and endochondral bones that attaches to the dorso-posterior part of the cranium, and support the radials and pectoral fin. It consists of two components: the primary pectoral girdle consisting of the endochondral coracoid, scapula and mesocoracoid bones, and the secondary pectoral girdle consisting of the dermal posttemporal, supracleithrum, cleithrum and poscleithrum(thra) bones." [TAO:curator] synonym: "pectoral girdles" EXACT PLURAL [] xref: TAO:0000407 xref: ZFIN:ZDB-ANAT-011113-331 is_a: ZFA:0001478 ! anatomical cluster relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000943 ! pectoral fin skeleton relationship: start ZFS:0000032 ! Pharyngula:High-pec [Term] id: ZFA:0000408 name: periventricular nucleus of caudal tuberculum namespace: zebrafish_anatomy def: "Diencephalic nucleus which is located between the ventral thalamus and the hypothalamus. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] synonym: "periventricular nucleus of posterior tuberculum" EXACT [] xref: TAO:0000408 xref: ZFIN:ZDB-ANAT-011113-333 is_a: ZFA:0001659 ! diencephalic nucleus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000633 ! caudal tuberculum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000410 name: postcleithrum namespace: zebrafish_anatomy def: "Dermal bone that is part of the pectoral girdle and located ventral to the supracleithrum and posterior to the cleithrum. Postcleithral bones are paired and can vary up in number from a single pair (such as in zebrafish) to three pairs in other teleosts." [ZFIN:curator] synonym: "postcleithra" EXACT PLURAL [] xref: TAO:0000410 xref: ZFIN:ZDB-ANAT-011113-335 is_a: ZFA:0001590 ! dermal bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000407 ! pectoral girdle relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000411 name: posterior crista primordium namespace: zebrafish_anatomy synonym: "posterior crista primordia" EXACT PLURAL [] xref: TAO:0000411 xref: ZFIN:ZDB-ANAT-011113-336 relationship: end ZFS:0000035 ! Larval:Protruding-mouth relationship: part_of ZFA:0000262 ! posterior semicircular canal relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0000412 name: otic vesicle posterior protrusion namespace: zebrafish_anatomy def: "Otic vesicle protrusion that is anteriorly located and gives rise to the pillar of the posterior semicircular canal." [ZFIN:ZDB-PUB-090330-11] synonym: "posterior semicircular canal primordia" RELATED PLURAL [] synonym: "posterior semicircular canal primordium" RELATED [] xref: TAO:0000412 xref: ZFIN:ZDB-ANAT-011113-337 is_a: ZFA:0001715 ! otic vesicle protrusion relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000032 ! Pharyngula:High-pec [Term] id: ZFA:0000413 name: gonad namespace: zebrafish_anatomy def: "The part of the reproductive system that produces and releases eggs (ovary) or sperm (testis)." [ZFIN:curator] synonym: "gonads" EXACT PLURAL [] xref: TAO:0000413 xref: ZFIN:ZDB-ANAT-060816-1 is_a: ZFA:0001490 ! cavitated compound organ relationship: develops_from ZFA:0005272 ! immature gonad relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000632 ! reproductive system relationship: part_of ZFA:0001438 ! coelom relationship: start ZFS:0000041 ! Larval:Days 21-29 [Term] id: ZFA:0000414 name: presumptive cephalic mesoderm namespace: zebrafish_anatomy xref: TAO:0000414 xref: ZFIN:ZDB-ANAT-011113-339 is_a: ZFA:0001105 ! embryonic structure relationship: end ZFS:0000024 ! Segmentation:5-9 somites relationship: part_of ZFA:0000041 ! mesoderm relationship: start ZFS:0000020 ! Gastrula:75%-epiboly [Term] id: ZFA:0000415 name: esophageal sphincter namespace: zebrafish_anatomy synonym: "oesophagial sphincter" EXACT [] xref: TAO:0000415 xref: ZFIN:ZDB-ANAT-011113-34 is_a: ZFA:0000172 ! branchial muscle relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000416 name: presumptive endoderm namespace: zebrafish_anatomy xref: TAO:0000416 xref: ZFIN:ZDB-ANAT-011113-340 is_a: ZFA:0001116 ! presumptive structure relationship: end ZFS:0000019 ! Gastrula:Shield relationship: start ZFS:0000014 ! Blastula:Sphere [Term] id: ZFA:0000417 name: presumptive spinal cord namespace: zebrafish_anatomy synonym: "presumptive spinal cord neural keel" EXACT [] synonym: "presumptive spinal cord neural plate" EXACT [] synonym: "presumptive spinal cord neural rod" EXACT [] xref: TAO:0000417 xref: ZFIN:ZDB-ANAT-011113-343 is_a: ZFA:0001105 ! embryonic structure relationship: end ZFS:0000020 ! Gastrula:75%-epiboly relationship: part_of ZFA:0007015 ! posterior presumptive neural plate relationship: start ZFS:0000019 ! Gastrula:Shield [Term] id: ZFA:0000418 name: pretectum namespace: zebrafish_anatomy def: "Multi-tissue structure that is the dorsal part of the diencephalon, caudal to the telencephalon, rostral to the midbrain optic tectum; the major sensory input to the pretectum is visual. From The Laboratory Fish." [ISBN:0125296509, ZFIN:curator] xref: TAO:0000418 xref: ZFIN:ZDB-ANAT-011113-344 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000101 ! diencephalon relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000419 name: pterosphenoid namespace: zebrafish_anatomy def: "Paired cartilage bones, flat and hexagonal in shape that contact the orbitosphenoid anteriorly. Roofed by the frontal and bordered posteriorly by the prootic and sphenotic, the pterosphenoid bears foramina that accommodate branches of the trigeminal and facial nerves." [ZFIN:curator] synonym: "pterosphenoids" EXACT PLURAL [] xref: TAO:0000419 xref: ZFIN:ZDB-ANAT-011113-345 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001515 ! taenia marginalis posterior relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000290 ! sphenoid region relationship: part_of ZFA:0001424 ! chondrocranium relationship: part_of ZFA:0001580 ! neurocranium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000420 name: renal artery namespace: zebrafish_anatomy synonym: "renal arteries" EXACT PLURAL [] xref: TAO:0000420 xref: ZFIN:ZDB-ANAT-011113-346 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000421 name: reticular formation namespace: zebrafish_anatomy xref: TAO:0000421 xref: ZFIN:ZDB-ANAT-011113-347 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000545 ! medulla oblongata relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000422 name: retroarticular namespace: zebrafish_anatomy def: "The retroarticular is a cartilage bone that forms at the posteroventral tip of Meckel's cartilage where the interoperculomandibular ligament attaches (5.1 mm NL). In the adult it is basically triangular in shape. The retroarticular is ligamentously connected to the interopercle and preopercle posteriorly and abuts the ventral shelf of the dentary anteriorly." [ZFIN:curator] synonym: "retroarticulars" EXACT PLURAL [] xref: TAO:0000422 xref: ZFIN:ZDB-ANAT-011113-348 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001205 ! Meckel's cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001273 ! ventral mandibular arch relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000423 name: anterior cardinal vein namespace: zebrafish_anatomy synonym: "ACV" EXACT [] synonym: "rostral cardinal vein" EXACT [] xref: TAO:0000423 xref: ZFIN:ZDB-ANAT-011113-349 is_a: ZFA:0000082 ! vein relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000096 ! cardinal system relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000424 name: opercular lateral line namespace: zebrafish_anatomy def: "One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator] synonym: "opercular lateral lines" EXACT PLURAL [] xref: TAO:0000424 xref: ZFIN:ZDB-ANAT-011113-35 is_a: ZFA:0001469 ! lateral line relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001470 ! anterior lateral line relationship: start ZFS:0000035 ! Larval:Protruding-mouth [Term] id: ZFA:0000425 name: anterior lateral line nerve namespace: zebrafish_anatomy def: "Cranial nerve which enters the brain between cranial nerves VI and VII and projects to a dorsal medullary area between cerebellum and vagal lobe. Contains afferents and sensory efferents to the anterior lateral line ganglia. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] synonym: "ALLn" EXACT [] synonym: "nervi lineae lateralis anterioris" EXACT [] synonym: "rostral lateral line nerve" EXACT [] xref: TAO:0000425 xref: ZFIN:ZDB-ANAT-011113-350 is_a: ZFA:0000641 ! cranial nerve is_a: ZFA:0001479 ! lateral line nerve relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001468 ! anterior lateral line system relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000426 name: rostral parvocellular preoptic nucleus namespace: zebrafish_anatomy def: "Diencephalic nucleus that is part of the preoptic area and is the anterior continuation of the caudal parvocellular preoptic nucleus and is ventral to the telencephalon. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] synonym: "anterior parvocellular preoptic nucleus" EXACT [] synonym: "rostral parvocellular preoptic nuclei" EXACT PLURAL [] xref: TAO:0000426 xref: ZFIN:ZDB-ANAT-011113-351 is_a: ZFA:0001680 ! parvocellular preoptic nucleus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000470 ! preoptic area relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000427 name: rostral thalamic nucleus namespace: zebrafish_anatomy def: "Diencephalic nucleus which is located in the anterior portion of the dorsal thalamus." [ZFIN:curator] synonym: "anterior thalamic nucleus" EXACT [] synonym: "nucleus anterior thalami" EXACT [] xref: TAO:0000427 xref: ZFIN:ZDB-ANAT-011113-352 is_a: ZFA:0001659 ! diencephalic nucleus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000653 ! dorsal thalamus relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000428 name: saccule namespace: zebrafish_anatomy def: "Otolith organ comprised of the macula saccule and sagitta. The lagena is part of the pars inferior. The saccule functions in the detection of sound and movement." [ZFIN:curator] synonym: "sacculus" EXACT [] xref: TAO:0000428 xref: ZFIN:ZDB-ANAT-011113-353 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000559 ! otolith organ relationship: part_of ZFA:0005410 ! pars inferior ear relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000429 name: scaphium namespace: zebrafish_anatomy def: "The scaphium is a modification of NA 1 in which the neural arch is reduced and fused to a cup-shaped ossification of membrane bone, the concha. The second Weberian ossicle, consisting of three parts: the concha, the ascending process, and the articulating process." [ZFIN:curator] xref: TAO:0000429 xref: ZFIN:ZDB-ANAT-011113-354 is_a: ZFA:0001066 ! neural arch relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000461 ! Weberian ossicle relationship: part_of ZFA:0001167 ! vertebra 1 relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0000430 name: secondary gustatory tract namespace: zebrafish_anatomy xref: TAO:0000430 xref: ZFIN:ZDB-ANAT-011113-355 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000545 ! medulla oblongata relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000431 name: semicircular canal namespace: zebrafish_anatomy def: "Fluid-filled toroidal spaces, arranged orthogonally to each other in the inner ear, that detect angular accelerations. (See Anatomical Atlas entry for semicircular canals by T. Whitfield.)" [ZFIN:curator] synonym: "scc" EXACT [] synonym: "semicircular canals" EXACT PLURAL [] synonym: "semicircular duct" EXACT [] xref: TAO:0000431 xref: ZFIN:ZDB-ANAT-011113-356 is_a: ZFA:0001643 ! anatomical space relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005409 ! pars superior ear relationship: start ZFS:0000032 ! Pharyngula:High-pec [Term] id: ZFA:0000433 name: sensory trigeminal nucleus namespace: zebrafish_anatomy synonym: "sensory trigeminal nuclei" EXACT PLURAL [] xref: TAO:0000433 xref: ZFIN:ZDB-ANAT-011113-358 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000545 ! medulla oblongata relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000434 name: skeletal system namespace: zebrafish_anatomy xref: TAO:0000434 xref: ZFIN:ZDB-ANAT-011113-359 is_a: ZFA:0001439 ! anatomical system relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000435 name: cranial nerve II namespace: zebrafish_anatomy def: "Cranial nerve which is comprised of retinal ganglion cell axons running posterior medially towards the optic chiasm, at which some of the axons cross the midline and after which the structure is termed the optic tract." [ZFIN:curator] synonym: "CN-II" EXACT [] synonym: "optic" EXACT [] synonym: "optic nerve" EXACT [] xref: TAO:0000435 xref: ZFIN:ZDB-ANAT-011113-36 is_a: ZFA:0000641 ! cranial nerve relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000338 ! diencephalic white matter relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0000436 name: spleen namespace: zebrafish_anatomy xref: TAO:0000436 xref: ZFIN:ZDB-ANAT-011113-360 is_a: ZFA:0000496 ! compound organ relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000339 ! digestive system relationship: part_of ZFA:0001159 ! immune system relationship: part_of ZFA:0001438 ! coelom relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000437 name: stomach namespace: zebrafish_anatomy xref: TAO:0002121 xref: ZFIN:ZDB-ANAT-011113-361 is_obsolete: true [Term] id: ZFA:0000438 name: parhypural namespace: zebrafish_anatomy alt_id: ZFA:0000562 def: "Hemal arch and spine of preural centrum 1. The parhypural is defined as the most posterior hemal arch with an open canal through which the ventral aorta passes." [ZFIN:ZDB-PUB-011008-1] synonym: "parhyural" EXACT [] synonym: "phy" EXACT [] xref: TAO:0000438 xref: ZFIN:ZDB-ANAT-011113-363 is_a: ZFA:0000859 ! specialized hemal arch and spine relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000557 ! preural 1 vertebra relationship: start ZFS:0000037 ! Larval:Day 5 [Term] id: ZFA:0000439 name: superficial pelvic abductor namespace: zebrafish_anatomy synonym: "superficial pelvic abductors" EXACT PLURAL [] xref: TAO:0000439 xref: ZFIN:ZDB-ANAT-011113-364 is_a: ZFA:0005269 ! abductor muscle relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000258 ! pelvic fin musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000440 name: superior raphe nucleus namespace: zebrafish_anatomy synonym: "anterior raphe nucleus" EXACT [] xref: TAO:0000440 xref: ZFIN:ZDB-ANAT-011113-365 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001429 ! raphe nucleus relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000441 name: suprachiasmatic nucleus namespace: zebrafish_anatomy def: "Diencephalic nucleus that is part of the preoptic area and is ventrolateral to the caudal parvocellular preoptic nucleus. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] xref: TAO:0000441 xref: ZFIN:ZDB-ANAT-011113-366 is_a: ZFA:0001659 ! diencephalic nucleus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000470 ! preoptic area relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000442 name: supraneural namespace: zebrafish_anatomy def: "Supraneurals independent, median, elongate, rod-like cartilages or bones in the dorsal skeletogenous septum between the cranium and the dorsal fin. In actinopterygians, supraneurals develop from cartilages that are independent of the neural spine (Arratia et al., 2001)." [ZFIN:curator] synonym: "sn" EXACT [] xref: TAO:0000442 xref: ZFIN:ZDB-ANAT-011113-367 is_a: ZFA:0001591 ! endochondral bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000317 ! postcranial axial skeleton relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0000443 name: supraorbital lateral line namespace: zebrafish_anatomy def: "One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator] synonym: "supraorbital lateral lines" EXACT PLURAL [] synonym: "supraorbital line" EXACT [ZFIN:ZDB-PUB-000523-3] xref: TAO:0000443 xref: ZFIN:ZDB-ANAT-011113-368 is_a: ZFA:0001469 ! lateral line relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001470 ! anterior lateral line relationship: start ZFS:0000031 ! Pharyngula:Prim-25 [Term] id: ZFA:0000444 name: suspensorium namespace: zebrafish_anatomy synonym: "hyopalatine" EXACT [] synonym: "suspensoria" EXACT [] xref: TAO:0000444 xref: ZFIN:ZDB-ANAT-011113-369 is_a: ZFA:0001478 ! anatomical cluster relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001216 ! splanchnocranium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000445 name: optic tectum namespace: zebrafish_anatomy alt_id: ZFA:0001353 def: "Multi-tissue structure that is the dorsal part of the midbrain and develops from the alar plate and is the most complex layered structure in the zebrafish brain." [ZFIN:curator] synonym: "dorsal midbrain" EXACT [] synonym: "mesencephalic tectum" EXACT [] synonym: "tectal lobe" EXACT [] synonym: "tectum" EXACT [ZFIN:ZDB-PUB-961014-576] synonym: "tectum opticum" EXACT [] xref: TAO:0000445 xref: ZFIN:ZDB-ANAT-011113-37 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001357 ! alar plate midbrain region relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000128 ! midbrain relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000446 name: tecto-bulbar tract namespace: zebrafish_anatomy xref: TAO:0000446 xref: ZFIN:ZDB-ANAT-011113-370 is_a: ZFA:0000318 ! brainstem and spinal white matter relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000447 name: tela chorioidea namespace: zebrafish_anatomy def: "Portion of tissue that is part of the primitive meninx which forms a fold, roofing a ventricle of the brain and supporting the choroid plexus." [ISBN:0030223695, ISBN:0683014617] synonym: "tela choroidea" RELATED [] xref: TAO:0000447 xref: ZFIN:ZDB-ANAT-011113-371 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001355 ! primitive meninx relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000448 name: tertiary gustatory nucleus namespace: zebrafish_anatomy def: "Diencephalic nucleus which is located ventral to the medial preglomerular nucleus in the caudal tuberculum. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] xref: TAO:0000448 xref: ZFIN:ZDB-ANAT-011113-372 is_a: ZFA:0001659 ! diencephalic nucleus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000633 ! caudal tuberculum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000449 name: torus longitudinalis namespace: zebrafish_anatomy def: "Multi-tissue structure that is a paired longitudinal eminence of granular cells that develops from the alar plate and is attached to the tegmentum in the medial tectal ventricle. The torus longitudinalis only occurs in ray finned fishes." [ZFIN:curator] synonym: "tori longitudinalis" EXACT PLURAL [] xref: TAO:0000449 xref: ZFIN:ZDB-ANAT-011113-373 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001357 ! alar plate midbrain region relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000128 ! midbrain relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000450 name: trochlear motor nucleus namespace: zebrafish_anatomy synonym: "motor nucleus IV" EXACT [] synonym: "nIV" EXACT [] xref: TAO:0000450 xref: ZFIN:ZDB-ANAT-011113-374 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000160 ! tegmentum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000451 name: upper oral valve namespace: zebrafish_anatomy def: "Portion of tissue, located on the upper jaw that defines the caudal extent of the labial cavity. The oral valves control the flow of water into the mouth during routine respiration." [ZFIN:ZDB-PUB-060921-12] synonym: "breathing valve" RELATED [] synonym: "buccal valve" RELATED [] synonym: "maxillary valve " EXACT [] synonym: "upper internal lip" RELATED [ZFIN:ZDB-PUB-060921-12] synonym: "upper semilunar valve " EXACT [ZFIN:ZDB-PUB-060921-12] xref: TAO:0000451 xref: ZFIN:ZDB-ANAT-011113-375 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000695 ! labial cavity relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000452 name: urohyal namespace: zebrafish_anatomy def: "The urohyal is a median dermal bone that ossifies in the membrane between the paired sternohyoideus muscles ventral to the anterior end of copula 1. It is an unpaired ossification of the tendon of the sternohyoideos muscles in basal teleosts, and it is paired in catfishes (Arratia and Schultze, 1990)." [ZFIN:curator] xref: TAO:0000452 xref: ZFIN:ZDB-ANAT-011113-376 is_a: ZFA:0001590 ! dermal bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001402 ! ventral hyoid arch relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000453 name: cranial nerve X namespace: zebrafish_anatomy synonym: "CN-X" EXACT [] synonym: "vagal nerve" EXACT [] synonym: "vagus nerve" EXACT [] xref: TAO:0000453 xref: ZFIN:ZDB-ANAT-011113-377 is_a: ZFA:0000641 ! cranial nerve relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001101 ! gustatory system relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000454 name: ventral accessory optic nucleus namespace: zebrafish_anatomy def: "Diencephalic nucleus that is part of the central pretectum and is ventromedial to the magnocellular superficial pretectal nucleus and the caudal pretectal nucleus. The ventral accessory optic nucleus is very large in zebrafish as compared to other cyprinids. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] xref: TAO:0000454 xref: ZFIN:ZDB-ANAT-011113-378 is_a: ZFA:0001659 ! diencephalic nucleus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000183 ! central pretectum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000455 name: ventral flexor namespace: zebrafish_anatomy xref: TAO:0000455 xref: ZFIN:ZDB-ANAT-011113-379 is_a: ZFA:0005271 ! flexor muscle relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000628 ! caudal fin musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000456 name: ventral nucleus of ventral telencephalon namespace: zebrafish_anatomy def: "Periventricular nucleus which lies rostral to the anterior commissure of the ventral telencephalon. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] synonym: "area ventralis telencephali, nucleus ventralis" EXACT [] synonym: "ventral division of ventral telencephalic area" RELATED [] synonym: "ventral nucleus of V" EXACT [] xref: TAO:0000456 xref: ZFIN:ZDB-ANAT-011113-380 is_a: ZFA:0001666 ! periventricular nucleus of ventral telencephalon relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000457 name: ventral rectus namespace: zebrafish_anatomy synonym: "ventral recti" EXACT PLURAL [] xref: TAO:0000457 xref: ZFIN:ZDB-ANAT-011113-381 is_a: ZFA:0000172 ! branchial muscle relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000511 ! extraocular musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000458 name: ventral thalamus namespace: zebrafish_anatomy synonym: "prethalamus" EXACT [ZFIN:ZDB-PUB-060207-11] xref: TAO:0000458 xref: ZFIN:ZDB-ANAT-011113-382 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001215 ! thalamus relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000459 name: ventromedial thalamic nucleus namespace: zebrafish_anatomy xref: TAO:0000459 xref: ZFIN:ZDB-ANAT-011113-384 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000458 ! ventral thalamus relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000460 name: Mauthner axon namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-386 is_obsolete: true [Term] id: ZFA:0000461 name: Weberian ossicle namespace: zebrafish_anatomy def: "A group of modified neural arches and spines of the first four vertebrae. These include, from anterior to posterior, the claustrum, scaphium, intercalarium, and tripus. The os suspensorium is considered to be a fifth ossicle." [ZFIN:ZDB-PUB-011008-1] synonym: "Weberian ossicles" EXACT PLURAL [] xref: TAO:0000461 xref: ZFIN:ZDB-ANAT-011113-387 is_a: ZFA:0001491 ! solid compound organ relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001188 ! Weberian apparatus relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0000462 name: abductor hyohyoid namespace: zebrafish_anatomy synonym: "abductors hyohyoid" EXACT PLURAL [] xref: TAO:0000462 xref: ZFIN:ZDB-ANAT-011113-388 is_a: ZFA:0000521 ! hyoid muscle relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000463 name: adductor namespace: zebrafish_anatomy synonym: "adductors" EXACT PLURAL [] xref: TAO:0000463 xref: ZFIN:ZDB-ANAT-011113-389 is_a: ZFA:0000172 ! branchial muscle relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000464 name: otic lateral line namespace: zebrafish_anatomy def: "One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator] synonym: "otic lateral lines" EXACT PLURAL [] xref: TAO:0000464 xref: ZFIN:ZDB-ANAT-011113-39 is_a: ZFA:0001469 ! lateral line relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001470 ! anterior lateral line relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0000465 name: adductor operculi namespace: zebrafish_anatomy def: "Is a hyoid muscle that moves the auditory capsules with the opercles." [ZFIN:ZDB-PUB-020703-2] synonym: "adductor operculae" EXACT PLURAL [] xref: TAO:0000465 xref: ZFIN:ZDB-ANAT-011113-390 is_a: ZFA:0000521 ! hyoid muscle relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000034 ! Hatching:Pec-fin [Term] id: ZFA:0000466 name: anal depressor namespace: zebrafish_anatomy synonym: "anal depressors" EXACT PLURAL [] xref: TAO:0000466 xref: ZFIN:ZDB-ANAT-011113-391 is_a: ZFA:0005270 ! depressor muscle relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001154 ! anal fin musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000467 name: anguloarticular namespace: zebrafish_anatomy def: "The anguloarticular is a compound bone that results of the fusion of the dermal angular and the cartilaginous articular and forms the posterior part of the lower jaw. The dermal part ossifies initially on the posterolateral surface of Meckel's cartilage near the articulation with the quadrate (5.5 mm NL). A posterior process forms, creating a synovial joint with the quadrate." [ZFIN:curator] synonym: "articular" EXACT [] xref: TAO:0000467 xref: ZFIN:ZDB-ANAT-011113-392 is_a: ZFA:0001590 ! dermal bone is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001644 ! articular cartilage relationship: develops_from ZFA:0001645 ! angular bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001273 ! ventral mandibular arch relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000468 name: anterior crista primordium namespace: zebrafish_anatomy synonym: "anterior crista primordia" EXACT PLURAL [] xref: TAO:0000468 xref: ZFIN:ZDB-ANAT-011113-393 relationship: end ZFS:0000035 ! Larval:Protruding-mouth relationship: part_of ZFA:0000314 ! anterior semicircular canal relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0000469 name: otic vesicle anterior protrusion namespace: zebrafish_anatomy def: "Otic vesicle protrusion that is anteriorly located and gives rise to the pillar of the anterior semicircular canal." [ZFIN:ZDB-PUB-090330-11] synonym: "anterior semicircular canal primordia" RELATED PLURAL [] synonym: "anterior semicircular canal primordium" RELATED [] xref: TAO:0000469 xref: ZFIN:ZDB-ANAT-011113-394 is_a: ZFA:0001715 ! otic vesicle protrusion relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000032 ! Pharyngula:High-pec [Term] id: ZFA:0000470 name: preoptic area namespace: zebrafish_anatomy def: "Area of the forebrain anterior to the posterior tuberculum and the hypothalamus and ventral to the ventral thalamus. See Figure 7, p. 34 in Atlas of Early Zebrafish Brain Development." [ISBN:0444517383, ZFIN:curator] synonym: "area praeoptica" EXACT [] synonym: "area preoptica" EXACT [] synonym: "preoptic region" EXACT [] xref: TAO:0000470 xref: ZFIN:ZDB-ANAT-011113-395 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000101 ! diencephalon relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000471 name: atrium namespace: zebrafish_anatomy def: "Cavitated compound organ that receives inflow of deoxygenated blood and delivers it to a muscular cardiac ventricle. Valves are present to direct flow. There are only two chambers present in the fish heart." [ZFIN:ZDB-PUB-020122-4] xref: TAO:0000471 xref: ZFIN:ZDB-ANAT-011113-396 is_a: ZFA:0001490 ! cavitated compound organ relationship: develops_from ZFA:0001718 ! presumptive atrium heart tube relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000114 ! heart relationship: start ZFS:0000032 ! Pharyngula:High-pec [Term] id: ZFA:0000472 name: basioccipital namespace: zebrafish_anatomy def: "Large median unpaired cartilage bone that contacts the exoccipital, epiotic and pterotic dorsally, and the parasphenoid anteriorly. Forms the posteroventral hind margin of the cranium, articulates with the centrum of the first vertebra. Bears a posteroventral pharyngeal process that is flattened ventrally and opposes the pharyngeal teeth of the fifth pair of ceratobranchials." [ZFIN:curator] xref: TAO:0000472 xref: ZFIN:ZDB-ANAT-011113-397 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001423 ! parachordal cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001414 ! occipital region relationship: part_of ZFA:0001424 ! chondrocranium relationship: part_of ZFA:0001580 ! neurocranium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000473 name: trunk musculature namespace: zebrafish_anatomy synonym: "body musculature" EXACT [] xref: TAO:0000473 xref: ZFIN:ZDB-ANAT-011113-399 is_a: ZFA:0000548 ! musculature system relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0000474 name: intercalar namespace: zebrafish_anatomy def: "Small membrane bone homologous with a cartilage bone in more basal fishes (Patterson, 1977). Situated between the exoccipital and the pterotic at point of attachment of short ligament that originates on the ventral arm of the posttemporal." [ZFIN:curator] synonym: "opisthotic" EXACT [] xref: TAO:0000474 xref: ZFIN:ZDB-ANAT-011113-4 is_a: ZFA:0001636 ! membrane bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000189 ! otic region relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000475 name: paraventricular organ namespace: zebrafish_anatomy def: "Diencephalic nucleus which is located anterior to the caudal tuberal nucleus and contains tyrosine hydroxylase immunoreactive CSF contacting bipolar cells." [ZFIN:ZDB-PUB-001220-2] synonym: "PVO" EXACT [] xref: TAO:0000475 xref: ZFIN:ZDB-ANAT-011113-40 is_a: ZFA:0001659 ! diencephalic nucleus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000633 ! caudal tuberculum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000476 name: branchiostegal ray namespace: zebrafish_anatomy def: "Dermal bone that is a bilaterally paired and flattened element that supports the branchiostegal membrane. Three dermal branchiostegal rays form in the branchiostegal membrane ventral to the ceratohyal cartilage. The most posterior ray, branchiostegal 3, ossifies first (3.4 mm NL), and the most anterior ray, branchiostegal 1, ossifies last (5.5 mm NL). The most posterior two branchiostegals (2 and 3) insert externally on the ceratohyal; their anterodorsal tips are thickened triangles, and the rays are expanded. The bifurcated tip of the acinaciform anteriormost ray lies at the ventral margin of the ceratohyal." [ZFIN:curator] synonym: "branchiostegal rays" EXACT PLURAL [] xref: TAO:0000476 xref: ZFIN:ZDB-ANAT-011113-400 is_a: ZFA:0001590 ! dermal bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001402 ! ventral hyoid arch relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000477 name: posterior cardinal vein namespace: zebrafish_anatomy def: "Continuation of the caudal vein cranial to the anal pore. The cardinal vein splits into a pair of vessels in the cranial trunk, just caudal to the radix of the aorta. The posterior cardinals each empty into the common cardinal vein." [ZFIN:curator] synonym: "axial vein" EXACT [] synonym: "caudal cardinal veins" EXACT [] synonym: "PCV" EXACT [] synonym: "postcardinal vein" EXACT [] xref: TAO:0000477 xref: ZFIN:ZDB-ANAT-011113-401 is_a: ZFA:0000082 ! vein relationship: develops_from ZFA:0005077 ! vascular cord relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000096 ! cardinal system relationship: part_of ZFA:0005024 ! trunk vasculature relationship: part_of ZFA:0005295 ! axial blood vessel relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000479 name: caudal mesencephalo-cerebellar tract namespace: zebrafish_anatomy def: "Brainstem tract which carries cerebellar afferents from the dorsal tegmental nucleus and nucleus lateralis valvulae. Fuses with the rostral mesencephalo-cerebellar tract upon entering the cerebellum. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] synonym: "posterior mesencephalo-cerebellar tract" EXACT [] xref: TAO:0000479 xref: ZFIN:ZDB-ANAT-011113-403 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000643 ! rostral cerebellar tract relationship: part_of ZFA:0001707 ! brainstem relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000480 name: caudal octavolateralis nucleus namespace: zebrafish_anatomy def: "Hindbrain nucleus which is part of the medulla oblongata and is a mechanoreceptive area along with the medial octavolateralis nucleus. It is smaller than the medial octavolateralis nucleus and is located lateral to the facial and vagal lobes of the medulla oblongata. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] synonym: "nucleus octavolateralis caudalis" EXACT [] xref: TAO:0000480 xref: ZFIN:ZDB-ANAT-011113-404 is_a: ZFA:0000381 ! lateral line sensory nuclei relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000481 name: caudal preglomerular nucleus namespace: zebrafish_anatomy def: "Preglomerular nucleus which is the most caudomedial of the preglomerular nuclei of the caudal tuberculum. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] synonym: "nucleus praeglomerulosus caudalis" EXACT [] xref: TAO:0000481 xref: ZFIN:ZDB-ANAT-011113-405 is_a: ZFA:0001662 ! preglomerular nucleus relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000482 name: caudal tuberal nucleus namespace: zebrafish_anatomy def: "Diencephalic nucleus which is located posterior to the paraventricular organ." [ZFIN:ZDB-PUB-001220-2] synonym: "posterior tuberal nucleus" EXACT [] xref: TAO:0000482 xref: ZFIN:ZDB-ANAT-011113-406 is_a: ZFA:0001659 ! diencephalic nucleus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000633 ! caudal tuberculum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000484 name: celiacomesenteric artery namespace: zebrafish_anatomy xref: TAO:0000484 xref: ZFIN:ZDB-ANAT-011113-408 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000485 name: central nucleus inferior lobe namespace: zebrafish_anatomy def: "Diencephalic nucleus which is part of the inferior lobe of the hypothalamus and consists of masses of large cells presumably migrated from the periventricular cell masses and receives signals from the secondary gustatory nucleus. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] synonym: "central nucleus inferior lobes" EXACT PLURAL [] synonym: "central nucleus of the inferior lobe" EXACT [] synonym: "nucleus centralis lobi inferioris hypothalami" EXACT [] xref: TAO:0000485 xref: ZFIN:ZDB-ANAT-011113-409 is_a: ZFA:0001659 ! diencephalic nucleus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000165 ! inferior lobe relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000486 name: parietal bone namespace: zebrafish_anatomy def: "Paired dermal bone that covers the hind part of the cranium, overlapping the dorsal edge of the sphenotic, pterotic, epiotic and the anterior edge of the supraoccipital. The parietal are overlapped anteriorly by the frontal." [ZFIN:curator] synonym: "post parietal" EXACT [] xref: TAO:0000486 xref: ZFIN:ZDB-ANAT-011113-41 is_a: ZFA:0001590 ! dermal bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000189 ! otic region relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001580 ! neurocranium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000487 name: central zone of dorsal telencephalon namespace: zebrafish_anatomy def: "Telencephalic nucleus which is centrally located and is surrounded by the other four dorsal telencephalic regions. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] synonym: "area dorsalis telencephali, zona centralis" EXACT [] synonym: "central zone of D" EXACT [] xref: TAO:0000487 xref: ZFIN:ZDB-ANAT-011113-410 is_a: ZFA:0001660 ! telencephalic nucleus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000505 ! dorsal telencephalon relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000488 name: ceratobranchial bone namespace: zebrafish_anatomy def: "Endochondral bone that is bilaterally paired and forms part of the ventral branchial arches. They articulate medially with the hypobranchials and laterally and dorsally with the epibranchials." [ZFIN:curator] synonym: "ceratobranchial bones" EXACT PLURAL [] xref: TAO:0000488 xref: ZFIN:ZDB-ANAT-011113-411 is_a: ZFA:0001591 ! endochondral bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0000490 name: commissura cerebelli namespace: zebrafish_anatomy def: "Cerebellar commissure which is located within the ventral boundary zone between valvula and corpus cerebelli. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209] synonym: "cerebellar commissure" EXACT [] xref: TAO:0000490 xref: ZFIN:ZDB-ANAT-011113-413 is_a: ZFA:0001708 ! cerebellar white matter relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000491 name: commissure of the caudal tuberculum namespace: zebrafish_anatomy synonym: "commissura tuberculi posterioris" EXACT [] synonym: "commissure of the posterior tuberculum" EXACT [] xref: TAO:0000491 xref: ZFIN:ZDB-ANAT-011113-414 is_a: ZFA:0000338 ! diencephalic white matter relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000492 name: coracoradialis namespace: zebrafish_anatomy xref: TAO:0000492 xref: ZFIN:ZDB-ANAT-011113-415 is_a: ZFA:0005145 ! muscle relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000563 ! pectoral fin musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000493 name: decussation of medial funicular nucleus namespace: zebrafish_anatomy xref: TAO:0000493 xref: ZFIN:ZDB-ANAT-011113-416 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000545 ! medulla oblongata relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000494 name: deep white zone namespace: zebrafish_anatomy synonym: "deep white zones" EXACT PLURAL [] xref: TAO:0000494 xref: ZFIN:ZDB-ANAT-011113-417 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000445 ! optic tectum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000495 name: infraorbital 5 namespace: zebrafish_anatomy def: "Plate like dermal bone with usually only one neuromast pore (Nelson, 1969). The last infraorbital bone in the series is referred to as the dermosphenotic (Nelson, 1969). In basal teleosts it is usually the sixth bone in the series but in zebrafish it is the fifth bone." [ZFIN:curator] synonym: "dermosphenotic" EXACT [] xref: TAO:0000495 xref: ZFIN:ZDB-ANAT-011113-418 is_a: ZFA:0000376 ! infraorbital relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001649 ! infraorbital series relationship: start ZFS:0000042 ! Juvenile:Days 30-44 [Term] id: ZFA:0000496 name: compound organ namespace: zebrafish_anatomy def: "Anatomical structure that has as its parts two or more multi-tissue structures of at least two different types and which through specific morphogenetic processes forms a single distinct structural unit demarcated by bona fide boundaries from other distinct anatomical structures of different types." [ZFIN:curator] synonym: "organ" EXACT [] xref: CARO:0000024 xref: TAO:0000496 xref: ZFIN:ZDB-ANAT-061101-6 is_a: ZFA:0000037 ! anatomical structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001094 ! whole organism relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000497 name: pelvic adductor profundus namespace: zebrafish_anatomy synonym: "pelvic adductors profundus" EXACT PLURAL [] xref: TAO:0000497 xref: ZFIN:ZDB-ANAT-011113-42 is_a: ZFA:0005268 ! adductor muscle relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000258 ! pelvic fin musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000498 name: dilator operculi namespace: zebrafish_anatomy def: "Mandibular muscle that inserts along the dorsolateral faces of the opercles." [ZFIN:ZDB-PUB-020703-2] synonym: "dilators operculi" EXACT PLURAL [] xref: TAO:0000498 xref: ZFIN:ZDB-ANAT-011113-420 is_a: ZFA:0000236 ! mandibular muscle relationship: develops_from ZFA:0007050 ! constrictor dorsalis relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000499 name: dorsal arrector namespace: zebrafish_anatomy def: "The muscle that acts as an antagonist to the arrector ventralis, reversing the direction of the leading edge of the pectoral fin to initiate the upstroke." [ZFIN:ZDB-PUB-050920-7] comment: Acts as antagonist to the ventral arrector. ZDB-PUB-050920 synonym: "arrector dorsalis" EXACT [ZFIN:ZDB-PUB-050920-7] synonym: "dorsal arrectors" EXACT PLURAL [] xref: TAO:0000499 xref: ZFIN:ZDB-ANAT-011113-421 is_a: ZFA:0005275 ! arrector muscle relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000500 name: dorsal erector namespace: zebrafish_anatomy synonym: "dorsal erectors" EXACT PLURAL [] xref: TAO:0000500 xref: ZFIN:ZDB-ANAT-011113-422 is_a: ZFA:0005267 ! erector muscle relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000648 ! dorsal fin musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000501 name: dorsal funiculus namespace: zebrafish_anatomy synonym: "funiculus dorsalis" EXACT [] xref: TAO:0000501 xref: ZFIN:ZDB-ANAT-011113-423 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000075 ! spinal cord relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000502 name: dorsal motor nucleus trigeminal nerve namespace: zebrafish_anatomy def: "Trigeminal motor nucleus that is located dorsal to the lateral longitudinal fascicle." [ISBN:3764351209] xref: TAO:0000502 xref: ZFIN:ZDB-ANAT-011113-424 is_a: ZFA:0001365 ! trigeminal motor nucleus relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000503 name: dorsal oblique branchial muscle namespace: zebrafish_anatomy synonym: "dorsal oblique branchial muscles" EXACT PLURAL [] xref: TAO:0000503 xref: ZFIN:ZDB-ANAT-011113-425 is_a: ZFA:0000172 ! branchial muscle relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000504 name: dorsal retractor namespace: zebrafish_anatomy synonym: "dorsal retractors" EXACT PLURAL [] xref: TAO:0000504 xref: ZFIN:ZDB-ANAT-011113-426 is_a: ZFA:0000172 ! branchial muscle relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000505 name: dorsal telencephalon namespace: zebrafish_anatomy def: "Brain structure which is the dorsal part of the telencephalon, most of which is developmentally everted such that the ependymal lining of the unpaired median ventricle becomes located at the apparent periphery of the telencephalon. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] synonym: "area dorsalis telencephali" EXACT [] synonym: "dorsal telencephalic area" EXACT [] xref: TAO:0000505 xref: ZFIN:ZDB-ANAT-011113-427 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000079 ! telencephalon relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000506 name: dorsal zone of dorsal telencephalon namespace: zebrafish_anatomy def: "Telencephalic nucleus which is the most dorsally located part of the dorsal telencephalon and surrounds the central zone of dorsal telencephalon. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] synonym: "area dorsalis telencephali, zona dorsalis" EXACT [] synonym: "dorsal zone of D" EXACT [] synonym: "dorsal zone of dorsal telencephalic area" EXACT [] xref: TAO:0000506 xref: ZFIN:ZDB-ANAT-011113-428 is_a: ZFA:0001660 ! telencephalic nucleus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000505 ! dorsal telencephalon relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000507 name: epineural namespace: zebrafish_anatomy def: "Some or all epineural bones ossify free from the neural arches in most teleosts. In some lower teleosts, e.g. Leptolepis, Hiodon, elopiforms and albuliforms, ossification proceeds from the attachment point of the ligament to the arch, and the epineural is a process of the neural arch. In many lower teleosts epineurals are forked proximally." [ZFIN:curator] synonym: "epineurals" EXACT PLURAL [] xref: TAO:0000507 xref: ZFIN:ZDB-ANAT-011113-429 is_a: ZFA:0000526 ! intermuscular bone relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0000508 name: pelvic radial namespace: zebrafish_anatomy def: "Internal skeletal supports of the pelvic fin." [TAO:curator] synonym: "pelvic radials" EXACT PLURAL [] xref: TAO:0000508 xref: ZFIN:ZDB-ANAT-011113-43 is_a: ZFA:0000271 ! radial relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001387 ! pelvic fin skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000509 name: epithalamus namespace: zebrafish_anatomy def: "Brain structure which is part of the diencephalon and consists of the dorsal and ventral nuclei of the habenula, and two dorsal outgrowths, the epiphysis and the saccus dorsalis. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209] xref: TAO:0000509 xref: ZFIN:ZDB-ANAT-011113-430 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000101 ! diencephalon relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000510 name: external levatores namespace: zebrafish_anatomy synonym: "external levators" EXACT PLURAL [] xref: TAO:0000510 xref: ZFIN:ZDB-ANAT-011113-432 is_a: ZFA:0000172 ! branchial muscle relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000511 name: extraocular musculature namespace: zebrafish_anatomy xref: TAO:0000511 xref: ZFIN:ZDB-ANAT-011113-433 is_a: ZFA:0000328 ! cephalic musculature relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000512 name: facial lobe namespace: zebrafish_anatomy synonym: "lobus facialis" EXACT [] xref: TAO:0000512 xref: ZFIN:ZDB-ANAT-011113-434 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000545 ! medulla oblongata relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000513 name: fast muscle cell somite 1 namespace: zebrafish_anatomy synonym: "fast muscle cells somite 1" EXACT PLURAL [] xref: TAO:0000513 xref: ZFIN:ZDB-ANAT-011113-435 is_a: ZFA:0009117 ! fast muscle cell relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000924 ! myotome somite 1 relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000514 name: frontal bone namespace: zebrafish_anatomy def: "Large elongated paired dermal bones that roof the cranium and bear part of the supraorbital canal. The frontal bones cover the upper edge of the lateral ethmoid, orbitosphenoid and pterosphenoids and overlaps the parietal bone posteriorly." [ZFIN:curator] xref: TAO:0000514 xref: ZFIN:ZDB-ANAT-011113-436 is_a: ZFA:0001590 ! dermal bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001410 ! orbital region relationship: part_of ZFA:0001580 ! neurocranium relationship: start ZFS:0000041 ! Larval:Days 21-29 [Term] id: ZFA:0000516 name: periventricular grey zone namespace: zebrafish_anatomy synonym: "periventricular grey zones" EXACT PLURAL [] xref: TAO:0000516 xref: ZFIN:ZDB-ANAT-011113-44 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000445 ! optic tectum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000517 name: glossopharyngeal lobe namespace: zebrafish_anatomy synonym: "lobus glossopharyngei" EXACT [] xref: TAO:0000517 xref: ZFIN:ZDB-ANAT-011113-440 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000545 ! medulla oblongata relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000518 name: griseum centrale namespace: zebrafish_anatomy def: "Hindbrain nucleus which is longitudinally oriented and situated along the ventral fourth ventricle and extends rostrally up to the level of the tegmentum of the midbrain. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] synonym: "central gray" EXACT [] synonym: "central grey" EXACT [] xref: TAO:0000518 xref: ZFIN:ZDB-ANAT-011113-441 is_a: ZFA:0001658 ! hindbrain nucleus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000545 ! medulla oblongata relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000519 name: hemal arch namespace: zebrafish_anatomy def: "Hemal arches extend ventrally from the centra of caudal and transitional vertebrae to enclose the caudal artery and vein. In cyprinids, the hemal arch forms directly in membrane bone." [ZFIN:curator] synonym: "haemal arch" EXACT [] synonym: "ventral arcocentrum" EXACT [] xref: TAO:0000519 xref: ZFIN:ZDB-ANAT-011113-442 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001361 ! basiventral relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000326 ! caudal vertebra relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000520 name: horizontal commissure namespace: zebrafish_anatomy xref: TAO:0000520 xref: ZFIN:ZDB-ANAT-011113-443 is_a: ZFA:0000338 ! diencephalic white matter relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000521 name: hyoid muscle namespace: zebrafish_anatomy synonym: "hyoid muscles" EXACT PLURAL [] xref: TAO:0000521 xref: ZFIN:ZDB-ANAT-011113-444 is_a: ZFA:0001652 ! head muscle relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001307 ! pharyngeal musculature relationship: part_of ZFA:0001611 ! pharyngeal arch 2 relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000522 name: inferior hyohyoid namespace: zebrafish_anatomy synonym: "inferior hyohyoids" EXACT PLURAL [] xref: TAO:0000522 xref: ZFIN:ZDB-ANAT-011113-445 is_a: ZFA:0000521 ! hyoid muscle relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000523 name: inferior reticular formation namespace: zebrafish_anatomy xref: TAO:0000523 xref: ZFIN:ZDB-ANAT-011113-446 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000542 ! medial column relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000524 name: infraorbital lateral line namespace: zebrafish_anatomy def: "One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator] synonym: "infraorbital line" EXACT [] xref: TAO:0000524 xref: ZFIN:ZDB-ANAT-011113-447 is_a: ZFA:0001469 ! lateral line relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001470 ! anterior lateral line relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0000525 name: intercalarium namespace: zebrafish_anatomy def: "Third Weberian ossicle. The intercalarium is a Y- or T-shaped modification of neural arch 2 in which an anterolateral process (the manubrium) is embedded in the interossicular ligament; other parts include the ascending and articulating processes." [ZFIN:ZDB-PUB-031103-13] xref: TAO:0000525 xref: ZFIN:ZDB-ANAT-011113-448 is_a: ZFA:0001066 ! neural arch relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000461 ! Weberian ossicle relationship: part_of ZFA:0001168 ! vertebra 2 relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0000526 name: intermuscular bone namespace: zebrafish_anatomy def: "Axial bone which is a segmental ossification that forms in the myoseptum; found in teleosts fishes only." [ZFIN:curator] synonym: "intermuscular bones" EXACT PLURAL [] xref: TAO:0000526 xref: ZFIN:ZDB-ANAT-011113-449 is_a: ZFA:0001591 ! endochondral bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000317 ! postcranial axial skeleton relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0000527 name: pharyngobranchial bone namespace: zebrafish_anatomy def: "The pharyngobranchials are the dorsalmost bones of the branchial arches located immediately dorsal and medial to the epibranchials." [ZFIN:curator] synonym: "infrapharyngobranchial" EXACT [] xref: TAO:0000527 xref: ZFIN:ZDB-ANAT-011113-45 is_a: ZFA:0001591 ! endochondral bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000528 name: interradialis namespace: zebrafish_anatomy synonym: "interradiali" EXACT PLURAL [] xref: TAO:0000528 xref: ZFIN:ZDB-ANAT-011113-450 is_a: ZFA:0005145 ! muscle relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000628 ! caudal fin musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000529 name: kidney namespace: zebrafish_anatomy synonym: "mesonephros" EXACT [] xref: TAO:0000529 xref: ZFIN:ZDB-ANAT-011113-451 is_a: ZFA:0001490 ! cavitated compound organ relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000163 ! renal system relationship: part_of ZFA:0001159 ! immune system relationship: part_of ZFA:0001438 ! coelom relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000530 name: lapillus namespace: zebrafish_anatomy alt_id: ZFA:0001102 def: "Otolith part of utricle." [ZFIN:ZDB-PUB-020403-4] synonym: "immature anterior otolith" RELATED [] synonym: "utricular otolith" EXACT [] synonym: "utriculith" EXACT [] xref: TAO:0000530 xref: ZFIN:ZDB-ANAT-011113-452 is_a: ZFA:0001617 ! otolith relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000700 ! utricle relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000531 name: lateral column namespace: zebrafish_anatomy synonym: "lateral columns" EXACT PLURAL [] xref: TAO:0000531 xref: ZFIN:ZDB-ANAT-011113-453 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000421 ! reticular formation relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000532 name: lateral valvula cerebelli namespace: zebrafish_anatomy def: "Lateral division of the valvula cerebelli." [ZFIN:curator] synonym: "lateral division" EXACT [] synonym: "valvula cerebelli, pars lateralis" EXACT [] xref: TAO:0000532 xref: ZFIN:ZDB-ANAT-011113-454 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000603 ! valvula cerebelli relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000533 name: lateral funiculus namespace: zebrafish_anatomy synonym: "lateral funiculi" EXACT PLURAL [] xref: TAO:0000533 xref: ZFIN:ZDB-ANAT-011113-455 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000075 ! spinal cord relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000534 name: lateral longitudinal fasciculus namespace: zebrafish_anatomy alt_id: ZFA:0000198 def: "The lateral longitudinal fascicule is an ascending bundle of axons. The LLF contains fibers of the auditory and mechanosensory systems which originate in the primary sensory brainstem nuclei and terminate in the torus semicircularis. The LLF lies dorsal to the superior reticular formation, adjacent to the ventral rhombencephalic commissure. The LLF becomes displaced more laterally as it approaches the torus semicircularis. The LLF is homologous to the mammalian lateral lemniscus." [ZFIN:ZDB-PUB-961014-1280] synonym: "lateral longitundinal fasciculus" EXACT [] synonym: "LLF" RELATED [] xref: TAO:0000534 xref: ZFIN:ZDB-ANAT-011113-456 is_a: ZFA:0000318 ! brainstem and spinal white matter relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000545 ! medulla oblongata relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000535 name: lateral reticular nucleus namespace: zebrafish_anatomy synonym: "lateral reticular nuclei" EXACT PLURAL [] xref: TAO:0000535 xref: ZFIN:ZDB-ANAT-011113-457 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000531 ! lateral column relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000536 name: lateral zone of dorsal telencephalon namespace: zebrafish_anatomy def: "Telencephalic nucleus which is laterally located and surrounds the central zone of dorsal telencephalon. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] synonym: "area dorsalis telencephali, zona lateralis" EXACT [] synonym: "lateral zone of D" EXACT [] synonym: "lateral zone of dorsal telencephalic area" EXACT [] xref: TAO:0000536 xref: ZFIN:ZDB-ANAT-011113-458 is_a: ZFA:0001660 ! telencephalic nucleus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000505 ! dorsal telencephalon relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000537 name: levator operculi namespace: zebrafish_anatomy synonym: "levator operculae" EXACT [] xref: TAO:0000537 xref: ZFIN:ZDB-ANAT-011113-459 is_a: ZFA:0000521 ! hyoid muscle relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000035 ! Larval:Protruding-mouth [Term] id: ZFA:0000538 name: rib namespace: zebrafish_anatomy def: "Endochondral bone that is intersegmental and rod-shaped, forming in the peritoneal membrane and attached to the vertebral parapophyses. Ribs protect and support internal organs." [ZFIN:curator] synonym: "dorsal rib" EXACT [] synonym: "pleural rib" EXACT [] xref: TAO:0000538 xref: ZFIN:ZDB-ANAT-011113-46 is_a: ZFA:0001591 ! endochondral bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001582 ! non-Weberian precaudal vertebra relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000539 name: locus coeruleus namespace: zebrafish_anatomy synonym: "loci coeruleus" EXACT PLURAL [] xref: TAO:0000539 xref: ZFIN:ZDB-ANAT-011113-460 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000545 ! medulla oblongata relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000540 name: magnocellular octaval nucleus namespace: zebrafish_anatomy synonym: "magnocellular octaval nuclei" EXACT PLURAL [] xref: TAO:0000540 xref: ZFIN:ZDB-ANAT-011113-461 is_a: ZFA:0000401 ! octaval nerve sensory nucleus relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000541 name: marginal blastomere namespace: zebrafish_anatomy def: "Cells (incompletely cleaved before the YSL forms), located at the surface just at the rim of the blastodisc, external to the deep blastomeres." [ZFIN:ZDB-PUB-961014-576] synonym: "marginal blastomeres" EXACT PLURAL [] xref: TAO:0000541 xref: ZFIN:ZDB-ANAT-011113-462 is_a: ZFA:0000093 ! blastomere relationship: end ZFS:0000015 ! Blastula:Dome relationship: start ZFS:0000005 ! Cleavage:16-cell [Term] id: ZFA:0000542 name: medial column namespace: zebrafish_anatomy synonym: "medial columns" EXACT PLURAL [] xref: TAO:0000542 xref: ZFIN:ZDB-ANAT-011113-463 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000421 ! reticular formation relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000543 name: medial longitudinal fasciculus namespace: zebrafish_anatomy def: "The medial longitudinal fasciculus (MLF) is a pair of crossed fiber tracts (group of axons), that begin with in the nucleus of the MLF and run ventral to the rhombencephalic ventricle, towards the caudal end of the medulla oblongata. The dorsal portion of the MLF including the Mauthner axon continues into the spinal chord while the ventral portion of the MLF associates with other fiber systems in the funiculus ventralis prior to reaching the spinal chord. Throughout the most of its rhombencephalic extent the MLF is intersected by the ventral rhombencephalic commissure." [ZFIN:ZDB-PUB-961014-1280] synonym: "MLF" RELATED [] xref: TAO:0000543 xref: ZFIN:ZDB-ANAT-011113-464 is_a: ZFA:0000318 ! brainstem and spinal white matter relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000544 name: medial pterygiophores anal fin namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-465 is_obsolete: true [Term] id: ZFA:0000545 name: medulla oblongata namespace: zebrafish_anatomy def: "Brain structure that is located ventrocaudal to the cerebellum and just anterior to the spinal cord and contains the sensory and motor nuclei of six cranial nerves. In zebrafish, with the exception of the cerebellum, the ventral remainder of the metencephalon can be separated only arbitrarily from the more caudal myelencephalic portion of the medulla oblongata and thus these are not distinguished here." [ISBN:3764351209] xref: TAO:0000545 xref: ZFIN:ZDB-ANAT-011113-466 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000029 ! hindbrain relationship: part_of ZFA:0001707 ! brainstem relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000546 name: mesonephric duct namespace: zebrafish_anatomy def: "Duct of the adult kidney (mesonephros), present bilaterally ventral to the somites and leading to the cloacal chamber." [ZFIN:curator] synonym: "renal duct" RELATED [] synonym: "Wolffian duct" RELATED [] xref: TAO:0000546 xref: ZFIN:ZDB-ANAT-011113-467 is_a: ZFA:0005171 ! duct relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000163 ! renal system relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000547 name: mouth namespace: zebrafish_anatomy xref: TAO:0000547 xref: ZFIN:ZDB-ANAT-011113-468 is_a: ZFA:0000292 ! surface structure relationship: develops_from ZFA:0001290 ! stomodeum relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000339 ! digestive system relationship: part_of ZFA:0001114 ! head relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000548 name: musculature system namespace: zebrafish_anatomy xref: TAO:0000548 xref: ZFIN:ZDB-ANAT-011113-469 is_a: ZFA:0001439 ! anatomical system relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0000549 name: posttemporal namespace: zebrafish_anatomy def: "Paired fin bone that attaches the pectoral girdle to the skull via two projections contacting the epiotic and intercalar bones, and carry the main laterosensory canal." [ZFIN:curator] synonym: "post-temporal " RELATED [] synonym: "postemporal" EXACT [] xref: TAO:0000549 xref: ZFIN:ZDB-ANAT-011113-47 is_a: ZFA:0001590 ! dermal bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000189 ! otic region relationship: part_of ZFA:0000407 ! pectoral girdle relationship: part_of ZFA:0000863 ! dermatocranium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000550 name: naris namespace: zebrafish_anatomy synonym: "nares" EXACT PLURAL [] xref: TAO:0000550 xref: ZFIN:ZDB-ANAT-011113-470 is_a: ZFA:0000292 ! surface structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000047 ! peripheral olfactory organ relationship: part_of ZFA:0001114 ! head relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0000551 name: nucleus lateralis valvulae namespace: zebrafish_anatomy xref: TAO:0000551 xref: ZFIN:ZDB-ANAT-011113-471 is_a: ZFA:0001658 ! hindbrain nucleus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000545 ! medulla oblongata relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000552 name: nucleus ruber namespace: zebrafish_anatomy xref: TAO:0000552 xref: ZFIN:ZDB-ANAT-011113-472 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000160 ! tegmentum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000553 name: oculomotor nucleus namespace: zebrafish_anatomy synonym: "motor nucleus III" EXACT [] synonym: "nIII" EXACT [] xref: TAO:0000553 xref: ZFIN:ZDB-ANAT-011113-474 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000160 ! tegmentum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000554 name: olfactory epithelium namespace: zebrafish_anatomy def: "Nasal epithelium wherein ciliated olfactory receptor neurons, supporting cells, and basal cells are located." [ZFIN:curator] synonym: "nasal epithelium" EXACT [] synonym: "nasal sensory epithelium" EXACT [] xref: TAO:0000554 xref: ZFIN:ZDB-ANAT-011113-475 is_a: ZFA:0001486 ! epithelium relationship: develops_from ZFA:0001431 ! primitive olfactory epithelium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000047 ! peripheral olfactory organ relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0000555 name: opercular flap namespace: zebrafish_anatomy synonym: "gill cover" EXACT [] synonym: "gill slit" RELATED [] synonym: "opercular apparatus" EXACT [] synonym: "operculum" EXACT [] xref: TAO:0000555 xref: ZFIN:ZDB-ANAT-011113-476 is_a: ZFA:0000292 ! surface structure relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000556 name: optic chiasm namespace: zebrafish_anatomy def: "Decussation of cranial nerve II axons whereby some cross the midline and some remain ipsilateral." [ZFIN:curator] xref: TAO:0000556 xref: ZFIN:ZDB-ANAT-011113-477 is_a: ZFA:0000338 ! diencephalic white matter relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0000557 name: preural 1 vertebra namespace: zebrafish_anatomy def: "Vertebra anterior to the urostyle; sometimes termed the 'penultimate' vertebra." [ZFIN:ZDB-PUB-011008-1] synonym: "penultimate vertebra" EXACT [] synonym: "preural centrum 1" EXACT [] synonym: "pu1" EXACT [] synonym: "second last vertebra" EXACT [] xref: TAO:0000557 xref: ZFIN:ZDB-ANAT-011113-479 is_a: ZFA:0000734 ! preural vertebra relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000037 ! Larval:Day 5 [Term] id: ZFA:0000558 name: posterior macula namespace: zebrafish_anatomy def: "Macula that is located in the developing posterior inner ear, and gives rise to the macula neglecta and the macula saccule. (See Anatomical Atlas entry for sensory patches of the ear by T. Whitfield.)" [ZFIN:curator] synonym: "pm" EXACT [] synonym: "posterior sensory patch" EXACT [] synonym: "posteromedial macula" EXACT [] xref: TAO:0000558 xref: ZFIN:ZDB-ANAT-011113-48 is_a: ZFA:0000386 ! macula relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0001671 ! macula communis relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000559 name: otolith organ namespace: zebrafish_anatomy def: "Cavitated compound organ that is a fluid filed chamber with a maculae on one surface and associated otolith tethered to the maculae.." [ZFIN:curator] synonym: "otolith organs" EXACT PLURAL [] xref: TAO:0000559 xref: ZFIN:ZDB-ANAT-011113-480 is_a: ZFA:0001490 ! cavitated compound organ relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000217 ! inner ear relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000560 name: oviduct namespace: zebrafish_anatomy synonym: "oviducts" EXACT PLURAL [] xref: TAO:0000560 xref: ZFIN:ZDB-ANAT-011113-481 is_a: ZFA:0005171 ! duct relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000303 ! female organism relationship: part_of ZFA:0000632 ! reproductive system relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000561 name: parasphenoid namespace: zebrafish_anatomy def: "Long, unpaired median dermal bone that runs almost the entire length of the cranium. Contacts the prevomer anteriorly, and the prootic and basioccipital posteriorly. Anteriorly the parasphenoid is a long, thin bone that widens abruptly at the point of contact with the prootic." [ZFIN:curator] xref: TAO:0000561 xref: ZFIN:ZDB-ANAT-011113-482 is_a: ZFA:0001590 ! dermal bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000290 ! sphenoid region relationship: part_of ZFA:0000351 ! olfactory region relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001410 ! orbital region relationship: part_of ZFA:0001580 ! neurocranium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000563 name: pectoral fin musculature namespace: zebrafish_anatomy synonym: "pectoral fin muscle" RELATED [] xref: TAO:0000563 xref: ZFIN:ZDB-ANAT-011113-484 is_a: ZFA:0000207 ! fin musculature relationship: develops_from ZFA:0001000 ! mesenchyme pectoral fin relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001161 ! pectoral fin relationship: start ZFS:0000031 ! Pharyngula:Prim-25 [Term] id: ZFA:0000564 name: pelvic abductor profundus namespace: zebrafish_anatomy synonym: "pelvic abductors profundus" EXACT PLURAL [] xref: TAO:0000564 xref: ZFIN:ZDB-ANAT-011113-485 is_a: ZFA:0005269 ! abductor muscle relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000258 ! pelvic fin musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000565 name: pelvic girdle namespace: zebrafish_anatomy def: "Anatomical cluster that consists of the paired basipterygia which support the pelvic fin." [TAO:curator] synonym: "pelvic girdles" EXACT PLURAL [] xref: TAO:0000565 xref: ZFIN:ZDB-ANAT-011113-486 is_a: ZFA:0001478 ! anatomical cluster relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001387 ! pelvic fin skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000566 name: posterior crista namespace: zebrafish_anatomy alt_id: ZFA:0000478 def: "Patches of thickened, pseudostratified epithelium of the inner ear, consisting of regular arrays of sensory hair cells interspersed with supporting cells. Each patch has its own characteristic shape and polarity pattern. (See Anatomical Atlas entry for sensory patches of the ear by T. Whitfield.)" [ZFIN:curator] synonym: "caudal crista" EXACT [] synonym: "pc" EXACT [] synonym: "posterior crista ampullaris" EXACT [] synonym: "posterior cristae" EXACT PLURAL [] synonym: "posterior semicircular canal sensory patch" EXACT [] synonym: "posterior semicircular canal sensory patches" EXACT PLURAL [] xref: TAO:0000566 xref: ZFIN:ZDB-ANAT-011113-490 is_a: ZFA:0001486 ! epithelium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000262 ! posterior semicircular canal relationship: start ZFS:0000035 ! Larval:Protruding-mouth [Term] id: ZFA:0000567 name: premaxilla namespace: zebrafish_anatomy def: "The premaxilla is a bone of the upper jaw. It is an L-shaped bone first visible as a thin sliver in the anterodorsal region of the upper lip, anterior to the dorsal tip of the maxilla (5.7 mm). In the adult, the premaxilla is ligamentously attached to its counterpart at the midline and the kinethmoid posterodorsally, by the premaxillo-rostroid ligaments. Premaxillary teeth are absent in zebrafish." [ZFIN:curator] synonym: "premaxillae" EXACT PLURAL [] xref: TAO:0000567 xref: ZFIN:ZDB-ANAT-011113-492 is_a: ZFA:0001590 ! dermal bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001272 ! palatoquadrate arch relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000568 name: presumptive blood namespace: zebrafish_anatomy xref: TAO:0000568 xref: ZFIN:ZDB-ANAT-011113-493 is_a: ZFA:0001116 ! presumptive structure relationship: end ZFS:0000027 ! Segmentation:20-25 somites relationship: start ZFS:0000014 ! Blastula:Sphere [Term] id: ZFA:0000569 name: presumptive hindbrain namespace: zebrafish_anatomy synonym: "presumptive rhombencephalon" EXACT [] xref: TAO:0000569 xref: ZFIN:ZDB-ANAT-011113-495 is_a: ZFA:0001105 ! embryonic structure relationship: end ZFS:0000020 ! Gastrula:75%-epiboly relationship: part_of ZFA:0000146 ! presumptive brain relationship: part_of ZFA:0007015 ! posterior presumptive neural plate relationship: start ZFS:0000019 ! Gastrula:Shield [Term] id: ZFA:0000570 name: optic primordium namespace: zebrafish_anatomy alt_id: ZFA:0000021 def: "Portion of tissue that is part of the anterior neural keel and will form the optic vesicle." [ZFIN:curator] synonym: "eye field" EXACT [] xref: TAO:0000570 xref: ZFIN:ZDB-ANAT-011113-496 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000023 ! Segmentation:1-4 somites relationship: part_of ZFA:0007024 ! anterior neural keel relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0000571 name: presumptive telencephalon namespace: zebrafish_anatomy xref: TAO:0000571 xref: ZFIN:ZDB-ANAT-011113-497 is_a: ZFA:0001105 ! embryonic structure relationship: end ZFS:0000025 ! Segmentation:10-13 somites relationship: part_of ZFA:0000131 ! neural keel relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0000573 name: internal cellular layer namespace: zebrafish_anatomy def: "Portion of tissue which is the innermost layer of the olfactory bulb. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] synonym: "stratum cellulare internum bulbi olfactorii" EXACT [] xref: TAO:0000573 xref: ZFIN:ZDB-ANAT-011113-5 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000402 ! olfactory bulb relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000574 name: presumptive diencephalon namespace: zebrafish_anatomy xref: TAO:0000574 xref: ZFIN:ZDB-ANAT-011113-50 is_a: ZFA:0001105 ! embryonic structure relationship: end ZFS:0000025 ! Segmentation:10-13 somites relationship: part_of ZFA:0000131 ! neural keel relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0000575 name: prootic namespace: zebrafish_anatomy def: "Paired cartilage bone that contacts the pterosphenoid anteriorly, the sphenotic and the pterotic dorsally, and the epiotic and basioccipital posteriorly. The parasphenoid covers the ventral region of each prootic, the upper edge of which contributes to the hyomandibular facet. Bear foramina that accommodate branches of the trigeminal and facial nerves." [ZFIN:curator] synonym: "prootics" EXACT PLURAL [] xref: TAO:0000575 xref: ZFIN:ZDB-ANAT-011113-500 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001423 ! parachordal cartilage relationship: develops_from ZFA:0001425 ! basal plate cartilage relationship: develops_from ZFA:0001500 ! auditory capsule relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000189 ! otic region relationship: part_of ZFA:0001424 ! chondrocranium relationship: part_of ZFA:0001580 ! neurocranium relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0000576 name: pterotic namespace: zebrafish_anatomy def: "Paired cartilage bone that contacts the autosphenotic anteriorly, the parietal dorsally, the prootic ventrally, and the epiotic and exoccipital posteriorly. The pterotic encloses the horizontal semicircular canal of the inner ear. The lower edge of the pterotic contributes to the hyomandibular facet." [ZFIN:curator] synonym: "autopterotic" EXACT [] xref: TAO:0000576 xref: ZFIN:ZDB-ANAT-011113-501 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001500 ! auditory capsule relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000189 ! otic region relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001424 ! chondrocranium relationship: part_of ZFA:0001580 ! neurocranium relationship: start ZFS:0000040 ! Larval:Days 14-20 [Term] id: ZFA:0000577 name: renal portal vein namespace: zebrafish_anatomy synonym: "renal portal veins" EXACT PLURAL [] xref: TAO:0000577 xref: ZFIN:ZDB-ANAT-011113-502 is_a: ZFA:0000082 ! vein relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005024 ! trunk vasculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000578 name: ceratohyal bone namespace: zebrafish_anatomy def: "Endochondral bone that is bilaterally paired and articulates with the hypohyal cartilage or bone, dorsal and ventral hypohyals, and epihyal posteriorly. The ceratohyal bone begins as a ossification in the anterior portion of the ceratohyal cartilage (4.6 mm NL). The posterior end broadens and meets the epihyal in a pad of cartilage. The anterior end broadens and terminates in two heads (8.8 mm). The anterodorsal head forms a synchondrosis with the dorsal hypohyal and the anteroventral head forms a synchondrosis with the ventral hypohyal. All of the branchiostegal rays articulate with the ventral edge of the ceratohyal." [ZFIN:curator] synonym: "anterior ceratohyal" EXACT [] synonym: "ceratohyal anterior" EXACT [] synonym: "rostral ceratohyal" EXACT [] xref: TAO:0000578 xref: ZFIN:ZDB-ANAT-011113-505 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001400 ! ceratohyal cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001402 ! ventral hyoid arch relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000579 name: rostral mesencephalo-cerebellar tract namespace: zebrafish_anatomy def: "Brainstem tract which carries cerebellar afferents from the pretectum and runs medial to the lateral longitudinal fascicle for a distance before turning dorsally to traverse the nucleus lateralis valvulae. Fuses with the caudal mesencephalo-cerebellar tract upon entering the cerebellum. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] synonym: "anterior mesencephalo-cerebellar tract" EXACT [] xref: TAO:0000579 xref: ZFIN:ZDB-ANAT-011113-506 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000643 ! rostral cerebellar tract relationship: part_of ZFA:0001707 ! brainstem relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000580 name: rostral preglomerular nucleus namespace: zebrafish_anatomy def: "Preglomerular nucleus which is the most rostrolaterally located of the preglomerular nuclei of the caudal tuberculum. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] synonym: "anterior preglomerular nucleus" EXACT [] synonym: "nucleus praeglomerulosus anterior" EXACT [] xref: TAO:0000580 xref: ZFIN:ZDB-ANAT-011113-507 is_a: ZFA:0001662 ! preglomerular nucleus relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000581 name: rostral tuberal nucleus namespace: zebrafish_anatomy def: "Diencephalic nucleus which is the most anterior and lateral part of the ventral hypothalamic zone. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] synonym: "anterior tuberal nucleus" EXACT [] synonym: "nucleus tuberis anterior" EXACT [] xref: TAO:0000581 xref: ZFIN:ZDB-ANAT-011113-508 is_a: ZFA:0001659 ! diencephalic nucleus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000707 ! ventral hypothalamic zone relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000582 name: saccus dorsalis namespace: zebrafish_anatomy xref: TAO:0000582 xref: ZFIN:ZDB-ANAT-011113-509 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000509 ! epithalamus relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000583 name: scapula namespace: zebrafish_anatomy def: "Endochondral bone that is located medial to the cleithrum, and articulates ventrally with the coracoid, medially with the mesocoracoid when the later is present and posteriorly with the upper one to three proximal radials. The scapula develops from the scapulocoracoid cartilage and belongs to the primary pectoral girdle. It may be perforated by the scapular foramen or it may be notched ventrally and forms together with a similar notch of the coracoid the scapulocoracoid foramen." [TAO:curator] synonym: "scapulae" EXACT PLURAL [] xref: TAO:0000583 xref: ZFIN:ZDB-ANAT-011113-510 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001455 ! scapulocoracoid relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000407 ! pectoral girdle relationship: start ZFS:0000041 ! Larval:Days 21-29 [Term] id: ZFA:0000585 name: kinethmoid cartilage namespace: zebrafish_anatomy def: "Cranial cartilage which is a small median cartilage located between the premaxillae and anterodorsal to the ethmoid." [ZFIN:curator] xref: TAO:0000585 xref: ZFIN:ZDB-ANAT-070928-115 is_a: ZFA:0001461 ! chondrocranium cartilage relationship: end ZFS:0000040 ! Larval:Days 14-20 relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000586 name: preural 2 vertebra namespace: zebrafish_anatomy def: "Vertebra anterior to preural centrum 1; sometimes termed the 'antepenultimate' vertebra." [ZFIN:ZDB-PUB-011008-1] synonym: "antepenultimate vertebra" EXACT [] synonym: "preural centrum 2" EXACT [] synonym: "pu2" EXACT [] synonym: "third last vertebra" EXACT [] xref: TAO:0000586 xref: ZFIN:ZDB-ANAT-011113-514 is_a: ZFA:0000734 ! preural vertebra relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000040 ! Larval:Days 14-20 [Term] id: ZFA:0000587 name: sphenotic namespace: zebrafish_anatomy def: "Paired cartilage bone that contacts the pterosphenoid anteriorly, the prootic ventrally, and the pterotic posteriorly. Roofed by the frontal bone anteriorly and the parietal bone posteriorly, the sphenotic bears a large anterolateral process that borders the posterodorsal margin of the orbit. The lower edge of the sphenotic contributes to the hyomandibular facet." [ZFIN:curator] synonym: "autosphenotic" EXACT [] xref: TAO:0000587 xref: ZFIN:ZDB-ANAT-011113-515 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001506 ! tectum synoticum relationship: develops_from ZFA:0001515 ! taenia marginalis posterior relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000189 ! otic region relationship: part_of ZFA:0001424 ! chondrocranium relationship: part_of ZFA:0001580 ! neurocranium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000588 name: statoacoustic (VIII) ganglion namespace: zebrafish_anatomy def: "The sensory ganglion of the ear. (See Anatomical Atlas entry for statoacoustic ganglion by T. Whitfield.)" [ZFIN:curator] synonym: "auditory ganglion" EXACT [] synonym: "gVIII" EXACT [] synonym: "sag" EXACT [] synonym: "statoacoustic ganglia" EXACT PLURAL [] xref: TAO:0000588 xref: ZFIN:ZDB-ANAT-011113-516 is_a: ZFA:0000013 ! cranial ganglion relationship: develops_from ZFA:0000138 ! otic placode relationship: develops_from ZFA:0000762 ! facio-acoustic neural crest relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001138 ! vestibuloauditory system relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000589 name: sulcus ypsiloniformis namespace: zebrafish_anatomy def: "Anatomical line which separates the dorsal and medial zones of dorsal telencephalon. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] xref: TAO:0000589 xref: ZFIN:ZDB-ANAT-011113-518 is_a: ZFA:0001690 ! groove relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000505 ! dorsal telencephalon relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000590 name: oral region namespace: zebrafish_anatomy xref: TAO:0000590 xref: ZFIN:ZDB-ANAT-011113-519 is_a: ZFA:0001478 ! anatomical cluster relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000547 ! mouth relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000591 name: presumptive paraxial mesoderm namespace: zebrafish_anatomy xref: TAO:0000591 xref: ZFIN:ZDB-ANAT-011113-52 is_a: ZFA:0001377 ! presumptive mesoderm relationship: end ZFS:0000021 ! Gastrula:90%-epiboly relationship: start ZFS:0000014 ! Blastula:Sphere [Term] id: ZFA:0000592 name: superficial pelvic adductor namespace: zebrafish_anatomy synonym: "superficial pelvic adductors" EXACT PLURAL [] xref: TAO:0000592 xref: ZFIN:ZDB-ANAT-011113-520 is_a: ZFA:0005268 ! adductor muscle relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000258 ! pelvic fin musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000593 name: superior reticular formation medial column namespace: zebrafish_anatomy xref: TAO:0000593 xref: ZFIN:ZDB-ANAT-011113-521 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000542 ! medial column relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000594 name: supracleithrum namespace: zebrafish_anatomy def: "Dermal bone that articulates dorsally with the posttemporal and ventrally with the cleithrum. Supracleithrum is part of the secondary pectoral girdle and commonly, carries part of the lateral line canal." [TAO:curator] synonym: "supracleithra" EXACT PLURAL [] xref: TAO:0000594 xref: ZFIN:ZDB-ANAT-011113-522 is_a: ZFA:0001590 ! dermal bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000407 ! pectoral girdle relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000595 name: supraoccipital namespace: zebrafish_anatomy def: "Large shield-shaped unpaired median cartilage bone that contact the parietal anteriorly, and the exoccipital and epiotic laterally. Forms the posterodorsal most point of the cranium. The supraoccipital usually bears a crest that extends posterodorsally." [ZFIN:curator] xref: TAO:0000595 xref: ZFIN:ZDB-ANAT-011113-523 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001506 ! tectum synoticum relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001414 ! occipital region relationship: part_of ZFA:0001424 ! chondrocranium relationship: part_of ZFA:0001580 ! neurocranium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000596 name: supraorbital series namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-524 is_obsolete: true [Term] id: ZFA:0000597 name: telencephalic white matter namespace: zebrafish_anatomy def: "CNS white matter that is part of the telencephalon." [ZFIN:curator] synonym: "telencephalic tract/commissure" EXACT [] xref: TAO:0000597 xref: ZFIN:ZDB-ANAT-011113-525 is_a: ZFA:0000145 ! CNS white matter relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000079 ! telencephalon relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000598 name: testis namespace: zebrafish_anatomy def: "Male reproductive organ." [ZFIN:curator] synonym: "testes" EXACT PLURAL [] xref: TAO:0000598 xref: ZFIN:ZDB-ANAT-011113-526 is_a: ZFA:0000413 ! gonad relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000242 ! male organism relationship: part_of ZFA:0001158 ! endocrine system relationship: start ZFS:0000041 ! Larval:Days 21-29 [Term] id: ZFA:0000599 name: torus semicircularis namespace: zebrafish_anatomy def: "Multi-tissue structure that is part of the midbrain and develops from the alar plate. The torus semicircularis is located dorsal to the lateral tegmentum where it extends into the medial tectal ventricle and receives ascending sensory octavolateralis input." [ZFIN:curator] xref: TAO:0000599 xref: ZFIN:ZDB-ANAT-011113-527 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001357 ! alar plate midbrain region relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000128 ! midbrain relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000600 name: cranial nerve IV namespace: zebrafish_anatomy synonym: "CN-IV" EXACT [] synonym: "trochlear" EXACT [] synonym: "trochlear nerve" EXACT [] xref: TAO:0000600 xref: ZFIN:ZDB-ANAT-011113-528 is_a: ZFA:0000641 ! cranial nerve relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000160 ! tegmentum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000601 name: pretectal periventricular nucleus namespace: zebrafish_anatomy def: "Diencephalic nucleus that is part of the synencephalon and the pretectum and is located periventricularly. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] synonym: "periventricular pretectum" EXACT [] synonym: "pretectal periventricular nuclei" EXACT PLURAL [] xref: TAO:0000601 xref: ZFIN:ZDB-ANAT-011113-53 is_a: ZFA:0001659 ! diencephalic nucleus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000293 ! synencephalon relationship: part_of ZFA:0000418 ! pretectum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000602 name: uroneural namespace: zebrafish_anatomy def: "Neural arch that extends along the dorso-lateral surface of the last preural centra and/or ural centra and the notochord (Arratia & Schultze, 1992). An uroneural develops as a modification of the neural arch of an ural centrum (Patterson, 1968). The series of uroneurals may include from 7 to 1 elements that are numbered from rostral to caudal. An uroneural is a paired membrane bone." [TAO:curator] synonym: "uroneurals" EXACT PLURAL [] xref: TAO:0000602 xref: ZFIN:ZDB-ANAT-011113-530 is_a: ZFA:0001066 ! neural arch relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000862 ! caudal fin skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000603 name: valvula cerebelli namespace: zebrafish_anatomy def: "Brain structure which is caudally attached to the rostral medulla oblongata and extends into the tectal ventricle. The valvula cerebelli consists of a granular and a molecular layer along with aggregations of large Purkinje and eurydendroid cells and is uniquely present in ray-finned fishes. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] synonym: "valvula cerebellum" EXACT PLURAL [] xref: TAO:0000603 xref: ZFIN:ZDB-ANAT-011113-531 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000100 ! cerebellum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000604 name: ventral aorta namespace: zebrafish_anatomy def: "Outflow artery from the heart to the aortic arches." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000604 xref: ZFIN:ZDB-ANAT-011113-532 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000605 name: ventral funiculus namespace: zebrafish_anatomy synonym: "ventral funiculi" EXACT PLURAL [] xref: TAO:0000605 xref: ZFIN:ZDB-ANAT-011113-533 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000075 ! spinal cord relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000606 name: ventral oblique branchial muscle namespace: zebrafish_anatomy synonym: "ventral oblique branchial muscles" EXACT PLURAL [] xref: TAO:0000606 xref: ZFIN:ZDB-ANAT-011113-534 is_a: ZFA:0000172 ! branchial muscle relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000607 name: ventral rhombencephalic commissure namespace: zebrafish_anatomy def: "Brainstem commissure that intersects the medial longitudinal fasciculus." [ISBN:3764351209] xref: TAO:0000607 xref: ZFIN:ZDB-ANAT-011113-535 is_a: ZFA:0000318 ! brainstem and spinal white matter relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000608 name: ventral transverse namespace: zebrafish_anatomy xref: TAO:0000608 xref: ZFIN:ZDB-ANAT-011113-536 is_a: ZFA:0000172 ! branchial muscle relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000609 name: ventrolateral nucleus namespace: zebrafish_anatomy def: "Midbrain nucleus which is part of the torus semicircularis and is the target of ascending octavolateralis systems related to mechanoreception. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] xref: TAO:0000609 xref: ZFIN:ZDB-ANAT-011113-537 is_a: ZFA:0001665 ! midbrain nucleus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000599 ! torus semicircularis relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000610 name: vertical myoseptum namespace: zebrafish_anatomy def: "Connective tissue partitions developing between the myotomes." [ZFIN:ZDB-PUB-961014-576] synonym: "transverse myoseptum" EXACT [] xref: TAO:0000610 xref: ZFIN:ZDB-ANAT-011113-538 is_a: ZFA:0001089 ! myoseptum relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0000611 name: visceromotor column namespace: zebrafish_anatomy xref: TAO:0000611 xref: ZFIN:ZDB-ANAT-011113-539 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000545 ! medulla oblongata relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000612 name: protractor hyoidei namespace: zebrafish_anatomy def: "Muscle located on ventral side of the head, linking the ventral hyoid arch to the dentary. Innervated by ramus mandibularis V and ramus hyoides VII." [TAO:curator] synonym: "protractors hyoidei" EXACT PLURAL [] xref: TAO:0000612 xref: ZFIN:ZDB-ANAT-011113-54 is_a: ZFA:0000521 ! hyoid muscle relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000614 name: abductor profundus namespace: zebrafish_anatomy synonym: "abductors profundus" EXACT PLURAL [] xref: TAO:0000614 xref: ZFIN:ZDB-ANAT-011113-542 is_a: ZFA:0005269 ! abductor muscle relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000563 ! pectoral fin musculature relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0000615 name: adductor arcus palatini namespace: zebrafish_anatomy synonym: "adductors arcus palatini" EXACT PLURAL [] xref: TAO:0000615 xref: ZFIN:ZDB-ANAT-011113-543 is_a: ZFA:0000521 ! hyoid muscle relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000616 name: adductor profundus namespace: zebrafish_anatomy synonym: "adductors profundus" EXACT PLURAL [] xref: TAO:0000616 xref: ZFIN:ZDB-ANAT-011113-544 is_a: ZFA:0005268 ! adductor muscle relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000563 ! pectoral fin musculature relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0000617 name: anal erector namespace: zebrafish_anatomy synonym: "anal erectors" EXACT PLURAL [] xref: TAO:0000617 xref: ZFIN:ZDB-ANAT-011113-545 is_a: ZFA:0005267 ! erector muscle relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001154 ! anal fin musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000618 name: ansulate commissure namespace: zebrafish_anatomy def: "Brainstem commissure located immediately rostral to the interpeduncular nucleus. Many fibers in the tecto-bulbar tract cross the midline through the ansulate commissure. Referred to as the ventral tegmental commissure at embryonic stages, and is the only commissure to change names during development. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209] synonym: "Cans" EXACT [] synonym: "commissura ansulata" EXACT [] synonym: "ventral tegmental commissure" EXACT [] xref: TAO:0000618 xref: ZFIN:ZDB-ANAT-011113-546 is_a: ZFA:0000318 ! brainstem and spinal white matter relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000619 name: anterior crista namespace: zebrafish_anatomy alt_id: ZFA:0000273 def: "Patches of thickened, pseudostratified epithelium of the inner ear, consisting of regular arrays of sensory hair cells interspersed with supporting cells. Each patch has its own characteristic shape and polarity pattern. (See Anatomical Atlas entry for sensory patches of the ear by T. Whitfield.)" [ZFIN:curator] synonym: "ac" EXACT [] synonym: "anterior crista ampullaris" EXACT [] synonym: "anterior cristae" EXACT PLURAL [] synonym: "anterior semicircular canal sensory patch" EXACT [] synonym: "anterior semicircular canal sensory patches" EXACT PLURAL [] synonym: "rostral crista" EXACT [] xref: TAO:0000619 xref: ZFIN:ZDB-ANAT-011113-547 is_a: ZFA:0001486 ! epithelium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000314 ! anterior semicircular canal relationship: start ZFS:0000035 ! Larval:Protruding-mouth [Term] id: ZFA:0000620 name: autopalatine namespace: zebrafish_anatomy def: "The cartilaginous autopalatine forms from the anterior palatoquadrate arch. The first sign of ossification is visible at the anterior tip where it articulates with the maxilla (7.6 mm). In adults there are three processes at the anterior portion of the palatine: a ventromedial process, which forms the socket of the small ball- and- socket joint with the preethmoid; a dorsomedial process, which is connected by a short ligament to the ethmoid; and a lateral process, which extends toward the first infraorbital. Possession of a dorsomedial process, which abuts the ethmoid, is a unique feature shared by Cypriniformes (Fink and Fink, 1981). The palatine has two components, the autopalatine (derived from pars autopalatine) and the dermal component having teeth, the dermopalatine Arratia & Schultze 1990. The element in cypriniforms is only the cartilage part, so that it is more correct to name it autopalatine and not as palatine in general that it implies a fusion of elements (as in perciforms)." [ZFIN:curator] synonym: "palatine" EXACT [] xref: TAO:0000620 xref: ZFIN:ZDB-ANAT-011113-549 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001399 ! palatoquadrate cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001272 ! palatoquadrate arch relationship: start ZFS:0000041 ! Larval:Days 21-29 [Term] id: ZFA:0000621 name: quadrate namespace: zebrafish_anatomy def: "The quadrate is the dorsal bone in the jaw joint with the anguloarticular of the lower jaw. Ossification of the quadrate, a cartilage bone, begins as a posteriorly projecting membranous spine between the symplectic cartilage and the preopercle (5.1 mm NL). The body of the quadrate ossifies first at the ball-and-socket articulation with the anguloarticular (6.5 mm). The adult quadrate is shaped roughly like an inverted triangle with a long, posteriorly projecting spine off its posteroventral edge. The presence of a posteroventral or posterior process of the quadrate is a synapomorphy of Teleostei." [ZFIN:curator] synonym: "quadrates" EXACT PLURAL [] xref: TAO:0000621 xref: ZFIN:ZDB-ANAT-011113-55 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001399 ! palatoquadrate cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001272 ! palatoquadrate arch relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0000622 name: barbel namespace: zebrafish_anatomy def: "Surface structure which is a tactile structure found in the branchial region. Barbels are covered with epidermis rich in taste buds, and are innervated by branches of the cranial nerves." [ZFIN:curator] synonym: "barble" EXACT [] xref: TAO:0000622 xref: ZFIN:ZDB-ANAT-011113-550 is_a: ZFA:0000292 ! surface structure relationship: develops_from ZFA:0005119 ! barbel primordium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000368 ! integument relationship: part_of ZFA:0001114 ! head relationship: start ZFS:0000043 ! Juvenile:Days 45-89 [Term] id: ZFA:0000623 name: basipterygium namespace: zebrafish_anatomy def: "Endochondral bone that is paired and supports the pelvic fin. The basipterygium has a posteromedial process called the ischiac process (Wietzman 1962)." [TAO:curator] synonym: "pelvic bone" EXACT [] xref: TAO:0000623 xref: ZFIN:ZDB-ANAT-011113-551 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001539 ! basipterygium cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000565 ! pelvic girdle relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000624 name: brachium conjunctivum namespace: zebrafish_anatomy comment: Term is being obsoleted because it cannot be anatomically identified in zebrafish. From Neuroanatomy of the Zebrafish Brain ISBN:3764351209. xref: TAO:0000624 xref: ZFIN:ZDB-ANAT-011113-552 is_obsolete: true [Term] id: ZFA:0000625 name: branchial bar namespace: zebrafish_anatomy synonym: "branchial bars" EXACT PLURAL [] xref: TAO:0000625 xref: ZFIN:ZDB-ANAT-011113-553 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000056 ! pharynx relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000626 name: bulbo-spinal tract namespace: zebrafish_anatomy def: "Brainstem and spinal tract which emerges medial to the caudal intermediate reticular formation and runs caudally along the medial edge of the inferior reticular formation. It is displaced laterally and associates with other tracts in the dorsal part of the funiculus lateralis immediately prior to reaching the spinal cord. The bulbo-spinal tract carries descending spinal projections. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209] synonym: "tractus bulbospinalis" EXACT [] xref: TAO:0000626 xref: ZFIN:ZDB-ANAT-011113-554 is_a: ZFA:0000318 ! brainstem and spinal white matter relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000627 name: epihyal namespace: zebrafish_anatomy def: "Endochondral bone that begins ossifying on the anterior surface of the posterior end of the ceratohyal cartilage near the site of articulation with the interhyal (5.8 mm). It joins the ceratohyal in a pad of persisting cartilage." [ZFIN:curator] synonym: "caudal ceratohyal" EXACT [] synonym: "posterior ceratohyal" EXACT [] xref: TAO:0000627 xref: ZFIN:ZDB-ANAT-011113-555 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001400 ! ceratohyal cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001402 ! ventral hyoid arch relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000628 name: caudal fin musculature namespace: zebrafish_anatomy def: "Fin musculature that is part of the caudal fin." [ZFIN:ZDB-PUB-011008-1] xref: TAO:0000628 xref: ZFIN:ZDB-ANAT-011113-556 is_a: ZFA:0000207 ! fin musculature relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001058 ! caudal fin relationship: start ZFS:0000037 ! Larval:Day 5 [Term] id: ZFA:0000629 name: caudal motor nucleus namespace: zebrafish_anatomy def: "Abducens motor nucleus which is located at the level of the intermediate reticular formation." [ZFIN:curator] synonym: "nucleus nervi abducentis, pars caudalis" EXACT [] synonym: "nVIc" EXACT [] xref: TAO:0000629 xref: ZFIN:ZDB-ANAT-011113-557 is_a: ZFA:0000713 ! abducens motor nucleus relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000630 name: caudal parvocellular preoptic nucleus namespace: zebrafish_anatomy def: "Diencephalic nucleus that is part of the preoptic area and is the posterior continuation of the rostral parvocellular preoptic nucleus. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209] synonym: "caudal parvocellular preoptic nuclei" EXACT PLURAL [] synonym: "posterior parvocellular preoptic nucleus" EXACT [] xref: TAO:0000630 xref: ZFIN:ZDB-ANAT-011113-558 is_a: ZFA:0001680 ! parvocellular preoptic nucleus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000470 ! preoptic area relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000631 name: caudal pretectal nucleus namespace: zebrafish_anatomy def: "Diencephalic nucleus that is part of the superficial pretectum and is rostrally contiguous with the magnocellular superficial pretectal nucleus. Cells of the caudal pretectal nucleus are slightly smaller and less orderly around a central neuropil than those of the magnocellular superficial pretectal nucleus. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] synonym: "caudal pretectal nuclei" EXACT PLURAL [] synonym: "posterior pretectal nucleus" EXACT [] xref: TAO:0000631 xref: ZFIN:ZDB-ANAT-011113-559 is_a: ZFA:0001659 ! diencephalic nucleus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000687 ! superficial pretectum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000632 name: reproductive system namespace: zebrafish_anatomy xref: TAO:0000632 xref: ZFIN:ZDB-ANAT-011113-56 is_a: ZFA:0001439 ! anatomical system relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000014 ! Blastula:Sphere [Term] id: ZFA:0000633 name: caudal tuberculum namespace: zebrafish_anatomy def: "Brain structure which is part of the diencephalon and is larger than the dorsal thalamus and ventral thalamus. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] synonym: "posterior tubercle" EXACT [] synonym: "posterior tuberculum" EXACT [] xref: TAO:0000633 xref: ZFIN:ZDB-ANAT-011113-560 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000101 ! diencephalon relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000634 name: caudal hypothalamic zone namespace: zebrafish_anatomy def: "Multi-tissue structure which forms most of the median tuberal portion of the hypothalamus. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] xref: ZFIN:ZDB-ANAT-011113-561 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000392 ! median tuberal portion relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000635 name: central pretectal nucleus namespace: zebrafish_anatomy def: "Diencephalic nucleus that is part of the central pretectum and is dorsal to the magnocellular superficial pretectal nucleus and the caudal prectal nucleus. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] synonym: "nucleus praetectalis centralis" EXACT [] xref: TAO:0000635 xref: ZFIN:ZDB-ANAT-011113-562 is_a: ZFA:0001659 ! diencephalic nucleus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000183 ! central pretectum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000636 name: cerebellar crest namespace: zebrafish_anatomy synonym: "crista cerebellaris" EXACT [] xref: TAO:0000636 xref: ZFIN:ZDB-ANAT-011113-563 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000291 ! medial octavolateralis nucleus relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000637 name: claustrum cartilage namespace: zebrafish_anatomy def: "Postcranial axial cartilage and Weberian ossicle that is located dorsal to the scaphium. The claustrum is bilaterally paired." [ZFIN:curator] xref: TAO:0000637 xref: ZFIN:ZDB-ANAT-011113-564 is_a: ZFA:0001457 ! postcranial axial cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000461 ! Weberian ossicle relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0000638 name: commissura rostral, pars dorsalis namespace: zebrafish_anatomy def: "Anterior commissure which is located immediately ventral to the supracommissural nucleus of area ventralis telencephali. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209] synonym: "commissura anterior, pars dorsalis" EXACT [] xref: TAO:0000638 xref: ZFIN:ZDB-ANAT-011113-565 is_a: ZFA:0001108 ! anterior commissure relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000639 name: commissure of the secondary gustatory nucleus namespace: zebrafish_anatomy def: "Cerebellar commissure that runs between the bulbo-spinal tract and the vestibulo-spinal tract." [ISBN:3764351209] synonym: "commissura nucleorum gustatoriorum secundariorum" EXACT [] synonym: "commissure of the secondary gustatory nuclei" RELATED [] xref: TAO:0000639 xref: ZFIN:ZDB-ANAT-011113-566 is_a: ZFA:0001708 ! cerebellar white matter relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000640 name: cornea namespace: zebrafish_anatomy def: "Multi-tissue structure that forms the transparent front part of the eye, covering the iris, pupil and anterior chamber." [http:www.encyclopedia.thefreedictionary.com/cornea] synonym: "corneas" EXACT PLURAL [] xref: TAO:0000640 xref: ZFIN:ZDB-ANAT-011113-567 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001688 ! corneal primordium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000107 ! eye relationship: start ZFS:0000034 ! Hatching:Pec-fin [Term] id: ZFA:0000641 name: cranial nerve namespace: zebrafish_anatomy def: "Twelve pairs of cranial nerves exit/enter the cranium through openings in the skull. The nerves contain efferent axons with motor and glandular functions, as well as afferent axons from cranial ganglia with sensory functions. The nerves are numbered in a rostral to caudal sequence, with the exception of the lateral line nerves." [ZFIN:curator] synonym: "cranial nerves" EXACT PLURAL [] xref: TAO:0000641 xref: ZFIN:ZDB-ANAT-011113-568 is_a: ZFA:0007009 ! nerve relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000396 ! nervous system relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000642 name: decussation of the medial octavolateralis nucleus namespace: zebrafish_anatomy xref: TAO:0000642 xref: ZFIN:ZDB-ANAT-011113-569 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000381 ! lateral line sensory nuclei relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000643 name: rostral cerebellar tract namespace: zebrafish_anatomy def: "CNS white matter comprised of the rostral mesencephalo-cerebellar and caudal mesencephalo-cerebellar tracts. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209] synonym: "anterior cerebellar tract" EXACT [] synonym: "tractus cerebellaris anterior" EXACT [] xref: TAO:0000643 xref: ZFIN:ZDB-ANAT-011113-57 is_a: ZFA:0000145 ! CNS white matter relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000100 ! cerebellum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000644 name: dental plate namespace: zebrafish_anatomy synonym: "dental plates" EXACT PLURAL [] xref: TAO:0000644 xref: ZFIN:ZDB-ANAT-011113-570 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000547 ! mouth relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000645 name: descending octaval nucleus namespace: zebrafish_anatomy synonym: "nucleus octavus descendens" EXACT [] xref: TAO:0000645 xref: ZFIN:ZDB-ANAT-011113-571 is_a: ZFA:0000401 ! octaval nerve sensory nucleus relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000646 name: anal fin distal radial namespace: zebrafish_anatomy def: "Rod-like internal median skeletal support bones of the anal fin, which articulate with the lepidotrichia distally." [ZFIN:curator] synonym: "anal fin distal radials" EXACT PLURAL [] xref: TAO:0000646 xref: ZFIN:ZDB-ANAT-011113-572 is_a: ZFA:0001646 ! anal fin radial relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001420 ! anal fin pterygiophore relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000647 name: dorsal caudal thalamic nucleus namespace: zebrafish_anatomy def: "Diencephalic nucleus which is located in the caudal portion of the dorsal thalamus, dorsal to the central caudal thalamic nucleus." [ZFIN:curator] synonym: "dorsal posterior thalamic nucleus" EXACT [] synonym: "nucleus dorsalis posterior thalami" EXACT [] xref: TAO:0000647 xref: ZFIN:ZDB-ANAT-011113-573 is_a: ZFA:0001659 ! diencephalic nucleus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000653 ! dorsal thalamus relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000648 name: dorsal fin musculature namespace: zebrafish_anatomy xref: TAO:0000648 xref: ZFIN:ZDB-ANAT-011113-574 is_a: ZFA:0000207 ! fin musculature relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001173 ! dorsal fin relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0000649 name: dorsal horn spinal cord namespace: zebrafish_anatomy synonym: "cornu dorsale" EXACT [] synonym: "dorsal horn" EXACT [] xref: TAO:0000649 xref: ZFIN:ZDB-ANAT-011113-575 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000075 ! spinal cord relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000650 name: dorsal motor root of V namespace: zebrafish_anatomy synonym: "dorsal motor roots of V" EXACT PLURAL [] xref: TAO:0000650 xref: ZFIN:ZDB-ANAT-011113-576 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000545 ! medulla oblongata relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000651 name: dorsal pelvic arrector namespace: zebrafish_anatomy synonym: "dorsal pelvic arrectors" EXACT PLURAL [] xref: TAO:0000651 xref: ZFIN:ZDB-ANAT-011113-577 is_a: ZFA:0005275 ! arrector muscle relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000258 ! pelvic fin musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000652 name: dorsal root namespace: zebrafish_anatomy synonym: "radix dorsalis" EXACT [] xref: TAO:0000652 xref: ZFIN:ZDB-ANAT-011113-578 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000075 ! spinal cord relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000653 name: dorsal thalamus namespace: zebrafish_anatomy def: "Multi-tissue structure that is the dorsal part of the thalamus and emerges ventral to the caudal portion of the ventral habenular nucleus. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] synonym: "thalamus, pars dorsalis" EXACT [] xref: TAO:0000653 xref: ZFIN:ZDB-ANAT-011113-579 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001215 ! thalamus relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000654 name: rostral motor nucleus namespace: zebrafish_anatomy def: "Abducens motor nucleus which is located at the level of the superior reticular formation." [ZFIN:curator] xref: TAO:0000654 xref: ZFIN:ZDB-ANAT-011113-58 is_a: ZFA:0000713 ! abducens motor nucleus relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000655 name: dorsomedial optic tract namespace: zebrafish_anatomy synonym: "tractus opticus dorsomedialis" EXACT [] xref: TAO:0000655 xref: ZFIN:ZDB-ANAT-011113-580 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000252 ! optic tract relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000656 name: ectopterygoid namespace: zebrafish_anatomy def: "The ectopterygoid is dermal bone located at the anterior part of the palatoquadrate. It is first visible as a very thin ossification along the anteroventral border of the palatoquadrate cartilage (6.4 mm). In adults it is a long sliver of bone that is narrow anteriorly where it meets the entopterygoid in a synostosis. It is slightly wider at its posterior synostosis with the quadrate." [ZFIN:curator] synonym: "ectopterygoids" EXACT PLURAL [] xref: TAO:0000656 xref: ZFIN:ZDB-ANAT-011113-581 is_a: ZFA:0001590 ! dermal bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001272 ! palatoquadrate arch relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000657 name: entopterygoid namespace: zebrafish_anatomy def: "The entopterygoid is a dermal bone that forms the anteroventral and ventral surface of the orbit. It develops as a long sliver of bone developing in the membrane dorsomedial to the palatoquadrate cartilage (3.8 mm NL)." [ZFIN:curator] synonym: "endopterygoid" EXACT [] synonym: "mesopterygoid" EXACT [] xref: TAO:0000657 xref: ZFIN:ZDB-ANAT-011113-582 is_a: ZFA:0001590 ! dermal bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001272 ! palatoquadrate arch relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000658 name: epibranchial bone namespace: zebrafish_anatomy def: "Pharyngeal arch bone that is bilaterally paired and articulates laterally with ceratobranchial cartilage or bone. Epibranchials are dorsal parts of the gill arches. Epibranchials 1-4 ossify in the epibranchial cartilages in a posterior to anterior progression. Gill rakers are present on the anterior and posterior edges of epibranchials 2 and 4 and the posterior edge of epibranchial 1. A reduced gill raker is present on the anterior margin of epibranchial 1 in some specimens." [ZFIN:curator] synonym: "epibranchial bones" EXACT PLURAL [] xref: TAO:0000658 xref: ZFIN:ZDB-ANAT-011113-583 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001527 ! epibranchial cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000660 name: epural namespace: zebrafish_anatomy def: "A free, modified neural spine of a preural or a ural vertebra that is placed between the last developed neural spine of a preural centrum and the dorsal axis (= anterior margin of first uroneural) of the caudal skeleton . An epural commonly supports one or more dorsal procurrent rays. An epural is an unpaired median perichondrally ossified bone." [TAO:curator] xref: TAO:0000660 xref: ZFIN:ZDB-ANAT-011113-585 is_a: ZFA:0001336 ! neural spine relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000862 ! caudal fin skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000661 name: exoccipital namespace: zebrafish_anatomy def: "Paired cartilage bone that bears a large foramen (lateral occipital foramen). Contacts the supraoccipital dorsally, the epiotic laterally and the basioccipital ventrally. Forms the posterior hind margin of the cranium and borders the lateral and posterior margins of the forum (foramen) magnum." [ZFIN:curator] synonym: "exoccipitals" EXACT PLURAL [] xref: TAO:0000661 xref: ZFIN:ZDB-ANAT-011113-586 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001423 ! parachordal cartilage relationship: develops_from ZFA:0001504 ! occipital arch cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001414 ! occipital region relationship: part_of ZFA:0001424 ! chondrocranium relationship: part_of ZFA:0001580 ! neurocranium relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0000662 name: external pharyngoclavicularis namespace: zebrafish_anatomy synonym: "external pharyngoclavicularae" EXACT PLURAL [] xref: TAO:0000662 xref: ZFIN:ZDB-ANAT-011113-587 is_a: ZFA:0000172 ! branchial muscle relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000663 name: extrascapula namespace: zebrafish_anatomy alt_id: ZFA:0001413 def: "Dermal canal-bearing bone placed at the dorso-posterior region of the skull roof, lying on the posterior region of the pterotic and parietals, or the pterotic and epioccipital, or on the pterotic, epioccipital and occipital bones." [TAO:curator] synonym: "supratemporal" EXACT [] synonym: "tabular" EXACT [] xref: TAO:0000663 xref: ZFIN:ZDB-ANAT-011113-588 is_a: ZFA:0001590 ! dermal bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000407 ! pectoral girdle relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000664 name: cranial nerve VII namespace: zebrafish_anatomy synonym: "CN-VII" EXACT [] synonym: "facial nerve" EXACT [] synonym: "nervus facialis" EXACT [] xref: TAO:0000664 xref: ZFIN:ZDB-ANAT-011113-589 is_a: ZFA:0000641 ! cranial nerve relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001101 ! gustatory system relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000665 name: rostral root of abducens nerve namespace: zebrafish_anatomy xref: TAO:0000665 xref: ZFIN:ZDB-ANAT-011113-59 is_a: ZFA:0001663 ! cranial nerve root relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000310 ! cranial nerve VI relationship: part_of ZFA:0000545 ! medulla oblongata relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000666 name: filamental artery namespace: zebrafish_anatomy def: "Artery of the gill filament." [ZFIN:curator] synonym: "filamental arteries" EXACT PLURAL [] xref: TAO:0000666 xref: ZFIN:ZDB-ANAT-011113-590 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000667 ! gill filament relationship: part_of ZFA:0005003 ! pharyngeal vasculature relationship: start ZFS:0000035 ! Larval:Protruding-mouth [Term] id: ZFA:0000667 name: gill filament namespace: zebrafish_anatomy def: "Portion of tissue that projects outward from the gill and is a thread-like, soft, red respiratory and excretory structure." [http:www.briancoad.com/Dictionary/G.htm, ZFIN:ZDB-PUB-961014-576] synonym: "gill filaments" EXACT PLURAL [] xref: TAO:0000667 xref: ZFIN:ZDB-ANAT-011113-592 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000354 ! gill relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000668 name: cranial nerve IX namespace: zebrafish_anatomy synonym: "CN-IX" EXACT [] synonym: "glossopharyngeal nerve" EXACT [] synonym: "nervus glossopharyngeus" EXACT [] xref: TAO:0000668 xref: ZFIN:ZDB-ANAT-011113-594 is_a: ZFA:0000641 ! cranial nerve relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001101 ! gustatory system relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000669 name: head kidney namespace: zebrafish_anatomy def: "The zebrafish head kidney consists of fused bilateral lobes located in the anterior part of the kidney. It is analogous to the mammalian bone marrow and the primary site of definitive hematopoiesis." [ZFIN:ZDB-PUB-040923-1] synonym: "anterior kidney" EXACT [] synonym: "kidney marrow" EXACT [] xref: TAO:0000669 xref: ZFIN:ZDB-ANAT-011113-595 is_a: ZFA:0000496 ! compound organ relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000529 ! kidney relationship: part_of ZFA:0001158 ! endocrine system relationship: part_of ZFA:0005023 ! hematopoietic system relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000670 name: hepatic vein namespace: zebrafish_anatomy def: "Vein that carries blood away from the liver." [ZFIN:Curator] synonym: "hepatic veins" EXACT PLURAL [] xref: TAO:0000670 xref: ZFIN:ZDB-ANAT-011113-596 is_a: ZFA:0000082 ! vein relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000123 ! liver relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000671 name: horizontal myoseptum namespace: zebrafish_anatomy def: "A connective tissue partition developing at the apex of the chevron-shaped myotome and separating dorsal (epaxial) and ventral (hypaxial) body wall muscle masses." [ZFIN:ZDB-PUB-961014-576] synonym: "horizontal septum" EXACT [] xref: TAO:0000671 xref: ZFIN:ZDB-ANAT-011113-597 is_a: ZFA:0001089 ! myoseptum relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000672 name: hyomandibula namespace: zebrafish_anatomy def: "The hyomandibula is the large, dorsal-most member of the hyoid arch. It begins ossifying in the dorsal edge of the hyosymplectic cartilage near the hyomandibular foramen (4.6 mm NL). Ossification spreads through the cartilage, and sheets of membrane bone form off the cartilage model anteriorly and posteriorly (6.6 mm). In the adult, the hyomandibula has cartilage-capped anterior and posterior articulating heads that meet the sphenotic-prootic fossa and the pterotic fossa, respectively, in synovial joints. A posterior knob of bone develops, also capped in cartilage, and it forms a synovial joint with the opercle." [ZFIN:curator] synonym: "hyomandibular" EXACT [] xref: TAO:0000672 xref: ZFIN:ZDB-ANAT-011113-598 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001422 ! hyosymplectic cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001401 ! dorsal hyoid arch relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000673 name: hypobranchial artery namespace: zebrafish_anatomy def: "A pair of HA are connect one to each AA1. They run rostromedially until at the extreme rostro-ventral midline the two vessels merge and then run straight caudally along the ventral midline until they reach the cranial end of the ventral aorta (VA). There, the single HA passes just dorsal to the rostral end of the VA and then immediately splits again into a pair of HA. The paired HA continue caudally just to either side of the ventral midline. The HA provide blood supply to the ventral branchial region and the heart." [ZFIN:ZDB-PUB-010205-5] synonym: "HA" EXACT [] xref: TAO:0000673 xref: ZFIN:ZDB-ANAT-011113-599 is_a: ZFA:0000005 ! artery relationship: develops_from ZFA:0005005 ! aortic arch 1 relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000035 ! Larval:Protruding-mouth [Term] id: ZFA:0000674 name: interopercle namespace: zebrafish_anatomy def: "Dermal bone that is located anterior to the subopercle and lying below and slightly ventral to the horizontal limb of the preopercle. The interopercle is a paired bone." [ZFIN:curator] synonym: "interopercles" EXACT PLURAL [] xref: TAO:0000674 xref: ZFIN:ZDB-ANAT-011113-6 is_a: ZFA:0001590 ! dermal bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000555 ! opercular flap relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001401 ! dorsal hyoid arch relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000676 name: sagitta namespace: zebrafish_anatomy alt_id: ZFA:0001103 def: "Otolith that is part of the sacculus." [ZFIN:ZDB-PUB-02040304] synonym: "immature posterior otolith" RELATED [] synonym: "saccular otolith" EXACT [] synonym: "sacculith" EXACT [] xref: TAO:0000676 xref: ZFIN:ZDB-ANAT-011113-61 is_a: ZFA:0001617 ! otolith relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000428 ! saccule relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000677 name: segmental intercostal artery namespace: zebrafish_anatomy synonym: "segmental intercostal arteries" EXACT PLURAL [] xref: TAO:0000677 xref: ZFIN:ZDB-ANAT-011113-62 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000678 name: hair cell anterior macula namespace: zebrafish_anatomy def: "Specialized neuronal receptor cells of the anterior macula. (Also see Anatomical Atlas entry for hair cells by T. Whitfield.)" [ZFIN:ZDB-PUB-961014-576] synonym: "sensory hair cells anterior macula" EXACT PLURAL [] xref: TAO:0000678 xref: ZFIN:ZDB-ANAT-011113-63 is_a: ZFA:0009366 ! hair cell relationship: develops_from ZFA:0001098 ! immature hair cell anterior macula relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000168 ! anterior macula relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000679 name: sensory root of facial nerve namespace: zebrafish_anatomy synonym: "sensory roots of facial nerves" EXACT PLURAL [] xref: TAO:0000679 xref: ZFIN:ZDB-ANAT-011113-64 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000545 ! medulla oblongata relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000680 name: sinoatrial valve namespace: zebrafish_anatomy synonym: "sinoatrial valves" EXACT PLURAL [] xref: TAO:0000680 xref: ZFIN:ZDB-ANAT-011113-65 is_a: ZFA:0005065 ! heart valve relationship: develops_from ZFA:0001317 ! endocardial cushion relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000154 ! sinus venosus relationship: part_of ZFA:0000471 ! atrium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000681 name: neural postzygapophysis namespace: zebrafish_anatomy def: "Paired, dorsomedially directed processes on the posterior ends of the centra, ligamentously joined to the neural prezygapophyses of the immediately posterior vertebra." [ZFIN:curator] synonym: "neural postzygapophyses" EXACT PLURAL [] synonym: "neural postzygopophysis" EXACT [] xref: TAO:0000681 xref: ZFIN:ZDB-ANAT-060331-3 is_a: ZFA:0001591 ! endochondral bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001066 ! neural arch relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000682 name: spinal artery namespace: zebrafish_anatomy synonym: "spinal arteries" EXACT PLURAL [] xref: TAO:0000682 xref: ZFIN:ZDB-ANAT-011113-67 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000683 name: subcommissural organ namespace: zebrafish_anatomy def: "Diencephalic nucleus that is part of the synencephalon, is located adjacent to the caudal commissure and contains ciliated neurosecretory ependymal cells. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] synonym: "SCO" EXACT [] xref: TAO:0000683 xref: ZFIN:ZDB-ANAT-011113-69 is_a: ZFA:0001659 ! diencephalic nucleus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000293 ! synencephalon relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000684 name: intertectal commissure namespace: zebrafish_anatomy def: "CNS white matter (commissure) that runs between the optic tectal hemispheres." [ZFIN:curator] xref: TAO:0000684 xref: ZFIN:ZDB-ANAT-011113-7 is_a: ZFA:0000145 ! CNS white matter relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000445 ! optic tectum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000685 name: superficial abductor namespace: zebrafish_anatomy synonym: "abductor superficialis" EXACT [ZFIN:ZDB-PUB-050920-7] synonym: "superficial abductors" EXACT PLURAL [] xref: TAO:0000685 xref: ZFIN:ZDB-ANAT-011113-70 is_a: ZFA:0005269 ! abductor muscle relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000563 ! pectoral fin musculature relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0000686 name: superficial grey and white zone namespace: zebrafish_anatomy synonym: "superficial gray and white zone" EXACT [] synonym: "superficial grey and white zones" EXACT PLURAL [] xref: TAO:0000686 xref: ZFIN:ZDB-ANAT-011113-71 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000445 ! optic tectum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000687 name: superficial pretectum namespace: zebrafish_anatomy def: "Multi-tissue structure that is the superficial part of the pretectum and is embedded in the optic tract." [ZFIN:curator] xref: TAO:0000687 xref: ZFIN:ZDB-ANAT-011113-72 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000418 ! pretectum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000688 name: olfactory support cell namespace: zebrafish_anatomy synonym: "support cells" EXACT PLURAL [] xref: TAO:0000688 xref: ZFIN:ZDB-ANAT-011113-73 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000047 ! peripheral olfactory organ relationship: start ZFS:0000038 ! Larval:Day 6 [Term] id: ZFA:0000689 name: supracommissural nucleus of ventral telencephalon namespace: zebrafish_anatomy def: "Periventricular nucleus which is contiguous with the caudal part of the dorsal nucleus of the ventral telencephalon and the postcommissural nucleus. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] synonym: "area ventralis telencephali, nucleus supracommissuralis" EXACT [] synonym: "supracommissural nucleus of V" EXACT [] xref: TAO:0000689 xref: ZFIN:ZDB-ANAT-011113-74 is_a: ZFA:0001666 ! periventricular nucleus of ventral telencephalon relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000690 name: supraoptic commissure namespace: zebrafish_anatomy xref: TAO:0000690 xref: ZFIN:ZDB-ANAT-011113-75 is_a: ZFA:0000338 ! diencephalic white matter relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000691 name: supraorbital bone namespace: zebrafish_anatomy def: "Paired dermal bones that form the anterodorsal margin of the orbit." [ZFIN:curator] synonym: "supraorbital bones" EXACT PLURAL [] xref: TAO:0000691 xref: ZFIN:ZDB-ANAT-011113-76 is_a: ZFA:0001590 ! dermal bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001410 ! orbital region relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000692 name: symplectic namespace: zebrafish_anatomy def: "The symplectic is an irregularly rod-shaped cartilage replacement bone articulating with the hyomandibular and quadrate." [ZFIN:curator] synonym: "symplectics" EXACT PLURAL [] xref: TAO:0000692 xref: ZFIN:ZDB-ANAT-011113-77 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001422 ! hyosymplectic cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001401 ! dorsal hyoid arch relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000693 name: tangential nucleus namespace: zebrafish_anatomy xref: TAO:0000693 xref: ZFIN:ZDB-ANAT-011113-78 is_a: ZFA:0000401 ! octaval nerve sensory nucleus relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000694 name: ceratobranchial 5 tooth namespace: zebrafish_anatomy def: "Is a multissue structure composed of dentine, enameloid and tooth pulp. The tips of the ceratobranchial5 teeth form before the ceratobranchial itself (3.0 mm NL). As they grow ventrally, they meet the perichondrally ossified surface of ceratobranchial5 and become firmly ankylosed to the bone. Ceratobranchial teeth are the only teeth present in zebrafish and other cypriniforms." [ZFIN:curator] synonym: "pharyngeal tooth" EXACT [] synonym: "teeth" EXACT PLURAL [] synonym: "tooth" EXACT [] xref: TAO:0000694 xref: ZFIN:ZDB-ANAT-011113-79 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0005138 ! dental organ relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000056 ! pharynx relationship: part_of ZFA:0001239 ! ceratobranchial 5 bone relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0000695 name: labial cavity namespace: zebrafish_anatomy def: "The anatomical space located between the lips and the oral valves." [ZFIN:curator] synonym: "labial cavities" EXACT PLURAL [] xref: TAO:0000695 xref: ZFIN:ZDB-ANAT-011113-8 is_a: ZFA:0001643 ! anatomical space relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000339 ! digestive system relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000696 name: telencephalic ventricle namespace: zebrafish_anatomy synonym: "lateral ventricle" EXACT [] synonym: "telencephalic vesicle" EXACT [] xref: TAO:0000696 xref: ZFIN:ZDB-ANAT-011113-80 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001259 ! forebrain ventricle relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000079 ! telencephalon relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000697 name: cranial nerve V namespace: zebrafish_anatomy def: "Cranial nerve which exits the medulla oblongata and carries both sensory and motor axons to and from the facial region." [ZFIN:curator] synonym: "CN-V" EXACT [] synonym: "trigeminal nerve" EXACT [] xref: TAO:0000697 xref: ZFIN:ZDB-ANAT-011113-81 is_a: ZFA:0000641 ! cranial nerve relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000698 name: tripus namespace: zebrafish_anatomy def: "The fourth Weberian ossicle. The tripus is a complex modification of the parapophysis and rib of the third vertebra. Anteriorly it attaches to the interosseus ligament and posteriorly it extends as a transformator process embedded in the tunica externa of the swimbladder." [ZFIN:ZDB-PUB-031103-13] xref: TAO:0000698 xref: ZFIN:ZDB-ANAT-011113-82 is_a: ZFA:0001591 ! endochondral bone is_a: ZFA:0001636 ! membrane bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000461 ! Weberian ossicle relationship: part_of ZFA:0001169 ! vertebra 3 relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0000699 name: ural ossification namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-83 is_obsolete: true [Term] id: ZFA:0000700 name: utricle namespace: zebrafish_anatomy def: "Otolith organ comprised of the macula utricle and lapillus. The lagena is part of the pars superior. The utricle functions in the detection of movement." [ZFIN:curator] synonym: "utriculus" EXACT [] xref: TAO:0000700 xref: ZFIN:ZDB-ANAT-011113-84 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000559 ! otolith organ relationship: part_of ZFA:0005409 ! pars superior ear relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000701 name: ventral arrector namespace: zebrafish_anatomy def: "Muscle that is important in controlling the leading edge of the pectoral fin in the juvenile zebrafish, particularly during the initiation of the downstroke." [ZFIN:ZDB-PUB-050920-7] comment: Acts as antagonist to the dorsal arrector. synonym: "arrector ventralis" EXACT [ZFIN:ZDB-PUB-050920-7] synonym: "ventral arrectors" EXACT PLURAL [] xref: TAO:0000701 xref: ZFIN:ZDB-ANAT-011113-85 is_a: ZFA:0005275 ! arrector muscle relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000563 ! pectoral fin musculature relationship: start ZFS:0000000 ! Unknown relationship: start ZFS:0000040 ! Larval:Days 14-20 [Term] id: ZFA:0000702 name: ventral horn spinal cord namespace: zebrafish_anatomy synonym: "ventral horns spinal cord" EXACT PLURAL [] xref: TAO:0000702 xref: ZFIN:ZDB-ANAT-011113-86 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000075 ! spinal cord relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000703 name: ventral motor nucleus trigeminal nerve namespace: zebrafish_anatomy def: "Trigeminal motor nucleus that is located at the ventrolateral edge of the lateral longitudinal fascicle." [ISBN:3764351209] xref: TAO:0000703 xref: ZFIN:ZDB-ANAT-011113-87 is_a: ZFA:0001365 ! trigeminal motor nucleus relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000704 name: ventral pelvic arrector namespace: zebrafish_anatomy synonym: "ventral pelvic arrectors" EXACT PLURAL [] xref: TAO:0000704 xref: ZFIN:ZDB-ANAT-011113-88 is_a: ZFA:0005275 ! arrector muscle relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000258 ! pelvic fin musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000705 name: ventral root namespace: zebrafish_anatomy synonym: "ventral roots" EXACT PLURAL [] xref: TAO:0000705 xref: ZFIN:ZDB-ANAT-011113-89 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000075 ! spinal cord relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000706 name: posterior intestine namespace: zebrafish_anatomy def: "The posterior intestine has short longitudinally arranged epithelial folds which are similar to the colon of higher vertebrates." [ZFIN:ZDB-PUB-050120-6] xref: TAO:0000706 xref: ZFIN:ZDB-ANAT-011113-9 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001338 ! intestine relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0000707 name: ventral hypothalamic zone namespace: zebrafish_anatomy def: "Multi-tissue structure which is the ventral region of the median tuberal portion of the hypothalamus and is the most rostral region of the hypothalamus. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] xref: TAO:0000707 xref: ZFIN:ZDB-ANAT-011113-90 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000392 ! median tuberal portion relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000708 name: ventrolateral optic tract namespace: zebrafish_anatomy synonym: "ventrolateral optic tracts" EXACT PLURAL [] xref: TAO:0000708 xref: ZFIN:ZDB-ANAT-011113-91 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000252 ! optic tract relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000709 name: vestibulo-spinal tract namespace: zebrafish_anatomy synonym: "vestibulo-spinal tracts" EXACT PLURAL [] xref: TAO:0000709 xref: ZFIN:ZDB-ANAT-011113-92 is_a: ZFA:0000318 ! brainstem and spinal white matter relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000710 name: viscerosensory commissural nucleus of Cajal namespace: zebrafish_anatomy synonym: "commissural nucleus of Cajal" EXACT [] synonym: "nucleus commissuralis Cajal" EXACT [] xref: TAO:0000710 xref: ZFIN:ZDB-ANAT-011113-93 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000545 ! medulla oblongata relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000711 name: DEL namespace: zebrafish_anatomy def: "A multilayer of deep cells of fairly uniform thickness that forms during early epiboly (at dome stage; upon conversion of the blastodisc to the blastoderm); during gastrulation the DEL (deep cell layer) gives rise to the epiblast and hypoblast." [ZFIN:ZDB-PUB-961014-576] synonym: "deep cell layer" EXACT [ZFIN:ZDB-PUB-961014-576] synonym: "DEL cells" EXACT PLURAL [] xref: TAO:0000711 xref: ZFIN:ZDB-ANAT-011113-94 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0001473 ! deep blastomere relationship: end ZFS:0000022 ! Gastrula:Bud relationship: part_of ZFA:0001176 ! blastoderm relationship: start ZFS:0000016 ! Blastula:30%-epiboly [Term] id: ZFA:0000712 name: I-YSL namespace: zebrafish_anatomy def: "The portion of the YSL that lies deep to the blastoderm during epiboly." [ZFIN:ZDB-PUB-961014-576] synonym: "internal yolk syncytial layer" EXACT [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000712 xref: ZFIN:ZDB-ANAT-011113-95 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000030 ! Pharyngula:Prim-15 relationship: part_of ZFA:0000088 ! YSL relationship: start ZFS:0000013 ! Blastula:Oblong [Term] id: ZFA:0000713 name: abducens motor nucleus namespace: zebrafish_anatomy def: "Hindbrain motor nucleus which is the origin of motor axons of cranial nerve VI. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] synonym: "abducens motor nuclei" EXACT PLURAL [] synonym: "abducens nucleus" EXACT [] synonym: "motor nucleus VI" EXACT [] synonym: "nVI" EXACT [] xref: TAO:0000713 xref: ZFIN:ZDB-ANAT-011113-96 is_a: ZFA:0001658 ! hindbrain nucleus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000545 ! medulla oblongata relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000714 name: accessory pretectal nucleus namespace: zebrafish_anatomy def: "Diencephalic nucleus that is part of the central pretectum and lies dorsolateral to the caudal pretectal nucleus. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] synonym: "APN" EXACT [] synonym: "nucleus praetectalis accessorius" EXACT [] xref: TAO:0000714 xref: ZFIN:ZDB-ANAT-011113-97 is_a: ZFA:0001659 ! diencephalic nucleus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000183 ! central pretectum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000715 name: adductor hyohyoid namespace: zebrafish_anatomy synonym: "adductors hyohyoid" EXACT PLURAL [] xref: TAO:0000715 xref: ZFIN:ZDB-ANAT-011113-98 is_a: ZFA:0000521 ! hyoid muscle relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000716 name: afferent branchial artery namespace: zebrafish_anatomy def: "Artery that is part of the pharyngeal arches 3-5, and forms the afferent portion of a loop off of the aortic arch." [ZFIN:ZDB-PUB-010205-5] synonym: "ABA" EXACT [] xref: TAO:0000716 xref: ZFIN:ZDB-ANAT-011113-99 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000354 ! gill relationship: part_of ZFA:0005003 ! pharyngeal vasculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000717 name: apical ectodermal ridge median fin fold namespace: zebrafish_anatomy def: "Apical ectodermal ridge that is part of the median fin fold." [ZFIN:curator] xref: TAO:0000717 xref: ZFIN:ZDB-ANAT-020309-1 is_a: ZFA:0001702 ! apical ectodermal ridge relationship: end ZFS:0000037 ! Larval:Day 5 relationship: part_of ZFA:0000040 ! median fin fold relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0000718 name: epaxial region somite 27 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000718 xref: ZFIN:ZDB-ANAT-020309-10 is_a: ZFA:0001084 ! epaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000931 ! myotome somite 27 relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000719 name: slow muscle cell somite 21 namespace: zebrafish_anatomy synonym: "slow muscle cells somite 21" EXACT PLURAL [] xref: TAO:0000719 xref: ZFIN:ZDB-ANAT-020309-100 is_a: ZFA:0009116 ! slow muscle cell relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000929 ! myotome somite 21 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000720 name: slow muscle cell somite 24 namespace: zebrafish_anatomy synonym: "slow muscle cells somite 24" EXACT PLURAL [] xref: TAO:0000720 xref: ZFIN:ZDB-ANAT-020309-101 is_a: ZFA:0009116 ! slow muscle cell relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000930 ! myotome somite 24 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000721 name: slow muscle cell somite 27 namespace: zebrafish_anatomy synonym: "slow muscle cells somite 27" EXACT PLURAL [] xref: TAO:0000721 xref: ZFIN:ZDB-ANAT-020309-102 is_a: ZFA:0009116 ! slow muscle cell relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000931 ! myotome somite 27 relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000722 name: slow muscle cell somite 3 namespace: zebrafish_anatomy synonym: "slow muscle cells somite 3" EXACT PLURAL [] xref: TAO:0000722 xref: ZFIN:ZDB-ANAT-020309-103 is_a: ZFA:0009116 ! slow muscle cell relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000932 ! myotome somite 3 relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000723 name: slow muscle cell somite 5 namespace: zebrafish_anatomy synonym: "slow muscle cells somite 5" EXACT PLURAL [] xref: TAO:0000723 xref: ZFIN:ZDB-ANAT-020309-104 is_a: ZFA:0009116 ! slow muscle cell relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000933 ! myotome somite 5 relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000724 name: slow muscle cell somite 8 namespace: zebrafish_anatomy synonym: "slow muscle cells somite 8" EXACT PLURAL [] xref: TAO:0000724 xref: ZFIN:ZDB-ANAT-020309-105 is_a: ZFA:0009116 ! slow muscle cell relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000934 ! myotome somite 8 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000725 name: somite 11 namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000725 xref: ZFIN:ZDB-ANAT-020309-106 is_a: ZFA:0000155 ! somite relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0000726 name: somite 14 namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000726 xref: ZFIN:ZDB-ANAT-020309-107 is_a: ZFA:0000155 ! somite relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0000727 name: somite 17 namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000727 xref: ZFIN:ZDB-ANAT-020309-108 is_a: ZFA:0000155 ! somite relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000728 name: somite 2 namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000728 xref: ZFIN:ZDB-ANAT-020309-109 is_a: ZFA:0000155 ! somite relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000729 name: epaxial region somite 3 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000729 xref: ZFIN:ZDB-ANAT-020309-11 is_a: ZFA:0001084 ! epaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000932 ! myotome somite 3 relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000730 name: somite 23 namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000730 xref: ZFIN:ZDB-ANAT-020309-110 is_a: ZFA:0000155 ! somite relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000731 name: somite 27 namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000731 xref: ZFIN:ZDB-ANAT-020309-111 is_a: ZFA:0000155 ! somite relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000732 name: somite 3 namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000732 xref: ZFIN:ZDB-ANAT-020309-112 is_a: ZFA:0000155 ! somite relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000733 name: somite 7 namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000733 xref: ZFIN:ZDB-ANAT-020309-113 is_a: ZFA:0000155 ! somite relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000734 name: preural vertebra namespace: zebrafish_anatomy def: "Vertebra which are the three most posterior vertebra supporting the caudal fin." [ZFIN:curator] synonym: "caudal fin vertebra" EXACT [] synonym: "specialized centra/vertebrae" EXACT PLURAL [] xref: TAO:0000734 xref: ZFIN:ZDB-ANAT-020309-114 is_a: ZFA:0000326 ! caudal vertebra relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000862 ! caudal fin skeleton relationship: start ZFS:0000037 ! Larval:Day 5 [Term] id: ZFA:0000735 name: hemal postzygapophysis namespace: zebrafish_anatomy def: "Paired, ventromedially directed processes on the posterior ends of the centra, ligamentously joined to the hemal postzygapophyses of the immediately posterior vertebra. The most posterior caudal vertebrae lack hemal postzygapophyses." [ZFIN:curator] synonym: "haemal postzygapophysis" EXACT [] synonym: "hemal postzygapophyses" EXACT PLURAL [] synonym: "hemal postzygopophysis" EXACT [] xref: TAO:0000735 xref: ZFIN:ZDB-ANAT-060331-4 is_a: ZFA:0001591 ! endochondral bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000519 ! hemal arch relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000737 name: cranium namespace: zebrafish_anatomy def: "Skeletal system that is part of the head, including the splanchnocranium, chondrocranium, and dermatocranium." [ZFIN:curator] synonym: "cranial skeleton" EXACT [] xref: TAO:0000737 xref: ZFIN:ZDB-ANAT-020309-117 is_a: ZFA:0000434 ! skeletal system relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001114 ! head relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000738 name: dorsal oblique extraocular muscle namespace: zebrafish_anatomy synonym: "dorsal oblique extraocular muscles" EXACT PLURAL [] xref: TAO:0000738 xref: ZFIN:ZDB-ANAT-020309-118 is_a: ZFA:0005145 ! muscle relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000511 ! extraocular musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000739 name: epaxial region somite 11 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000739 xref: ZFIN:ZDB-ANAT-020309-119 is_a: ZFA:0001084 ! epaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000801 ! myotome somite 11 relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0000740 name: epaxial region somite 5 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000740 xref: ZFIN:ZDB-ANAT-020309-12 is_a: ZFA:0001084 ! epaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000933 ! myotome somite 5 relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000741 name: epaxial region somite 14 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000741 xref: ZFIN:ZDB-ANAT-020309-120 is_a: ZFA:0001084 ! epaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000044 ! myotome somite 14 relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0000742 name: epaxial region somite 17 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000742 xref: ZFIN:ZDB-ANAT-020309-121 is_a: ZFA:0001084 ! epaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001015 ! myotome somite 17 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000743 name: epaxial region somite 2 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000743 xref: ZFIN:ZDB-ANAT-020309-122 is_a: ZFA:0001084 ! epaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001016 ! myotome somite 2 relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000744 name: epaxial region somite 22 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000744 xref: ZFIN:ZDB-ANAT-020309-123 is_a: ZFA:0001084 ! epaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001017 ! myotome somite 22 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000745 name: epaxial region somite 25 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000745 xref: ZFIN:ZDB-ANAT-020309-124 is_a: ZFA:0001084 ! epaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001018 ! myotome somite 25 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000746 name: epaxial region somite 28 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000746 xref: ZFIN:ZDB-ANAT-020309-125 is_a: ZFA:0001084 ! epaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001019 ! myotome somite 28 relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000747 name: epaxial region somite 30 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000747 xref: ZFIN:ZDB-ANAT-020309-126 is_a: ZFA:0001084 ! epaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001020 ! myotome somite 30 relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000748 name: epaxial region somite 6 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000748 xref: ZFIN:ZDB-ANAT-020309-127 is_a: ZFA:0001084 ! epaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001021 ! myotome somite 6 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000749 name: epaxial region somite 9 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000749 xref: ZFIN:ZDB-ANAT-020309-128 is_a: ZFA:0001084 ! epaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001022 ! myotome somite 9 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000750 name: fast muscle cell somite 10 namespace: zebrafish_anatomy synonym: "fast muscle cells somite 10" EXACT PLURAL [] xref: TAO:0000750 xref: ZFIN:ZDB-ANAT-020309-129 is_a: ZFA:0009117 ! fast muscle cell relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001013 ! myotome somite 10 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000751 name: epaxial region somite 8 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000751 xref: ZFIN:ZDB-ANAT-020309-13 is_a: ZFA:0001084 ! epaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000934 ! myotome somite 8 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000752 name: fast muscle cell somite 13 namespace: zebrafish_anatomy synonym: "fast muscle cells somite 13" EXACT PLURAL [] xref: TAO:0000752 xref: ZFIN:ZDB-ANAT-020309-130 is_a: ZFA:0009117 ! fast muscle cell relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001014 ! myotome somite 13 relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0000753 name: fast muscle cell somite 16 namespace: zebrafish_anatomy synonym: "fast muscle cells somite 16" EXACT PLURAL [] xref: TAO:0000753 xref: ZFIN:ZDB-ANAT-020309-131 is_a: ZFA:0009117 ! fast muscle cell relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000927 ! myotome somite 16 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000754 name: fast muscle cell somite 19 namespace: zebrafish_anatomy synonym: "fast muscle cells somite 19" EXACT PLURAL [] xref: TAO:0000754 xref: ZFIN:ZDB-ANAT-020309-132 is_a: ZFA:0009117 ! fast muscle cell relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000928 ! myotome somite 19 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000755 name: fast muscle cell somite 21 namespace: zebrafish_anatomy synonym: "fast muscle cells somite 21" EXACT PLURAL [] xref: TAO:0000755 xref: ZFIN:ZDB-ANAT-020309-133 is_a: ZFA:0009117 ! fast muscle cell relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000929 ! myotome somite 21 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000756 name: fast muscle cell somite 24 namespace: zebrafish_anatomy synonym: "fast muscle cells somite 24" EXACT PLURAL [] xref: TAO:0000756 xref: ZFIN:ZDB-ANAT-020309-134 is_a: ZFA:0009117 ! fast muscle cell relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000930 ! myotome somite 24 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000757 name: fast muscle cell somite 27 namespace: zebrafish_anatomy synonym: "fast muscle cells somite 27" EXACT PLURAL [] xref: TAO:0000757 xref: ZFIN:ZDB-ANAT-020309-135 is_a: ZFA:0009117 ! fast muscle cell relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000931 ! myotome somite 27 relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000758 name: fast muscle cell somite 3 namespace: zebrafish_anatomy synonym: "fast muscle cells somite 3" EXACT PLURAL [] xref: TAO:0000758 xref: ZFIN:ZDB-ANAT-020309-136 is_a: ZFA:0009117 ! fast muscle cell relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000932 ! myotome somite 3 relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000759 name: fast muscle cell somite 5 namespace: zebrafish_anatomy synonym: "fast muscle cells somite 5" EXACT PLURAL [] xref: TAO:0000759 xref: ZFIN:ZDB-ANAT-020309-137 is_a: ZFA:0009117 ! fast muscle cell relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000933 ! myotome somite 5 relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000760 name: fast muscle cell somite 8 namespace: zebrafish_anatomy synonym: "fast muscle cells somite 8" EXACT PLURAL [] xref: TAO:0000760 xref: ZFIN:ZDB-ANAT-020309-138 is_a: ZFA:0009117 ! fast muscle cell relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000934 ! myotome somite 8 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000761 name: basal plate midbrain region namespace: zebrafish_anatomy def: "Portion of tissue that is dorsolateral to the floor plate and part of the midbrain." [ISBN:0444517383, ZFIN:ZDB-PUB-961014-576] synonym: "floor plate midbrain" RELATED [] synonym: "floorplate midbrain" RELATED [] xref: TAO:0000761 xref: ZFIN:ZDB-ANAT-020309-139 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000000 ! Unknown relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0007039 ! midbrain neural tube relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000762 name: facio-acoustic neural crest namespace: zebrafish_anatomy def: "Cranial neural crest that gives rise to the facio-acoustic ganglion." [ZFIN:curator] synonym: "facio acoustic neural crest" EXACT [] xref: TAO:0000762 xref: ZFIN:ZDB-ANAT-020309-14 is_a: ZFA:0001194 ! cranial neural crest relationship: end ZFS:0000028 ! Segmentation:26+ somites relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000763 name: floor plate rhombomere 2 namespace: zebrafish_anatomy def: "Floor plate that is part of the rhombomere 2." [ZFIN:Curator] synonym: "floor plate r2" EXACT [] synonym: "floorplate r2" EXACT [] xref: TAO:0000763 xref: ZFIN:ZDB-ANAT-020309-140 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0000822 ! rhombomere 2 relationship: part_of ZFA:0001258 ! floor plate rhombomere region relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000764 name: floor plate rhombomere 5 namespace: zebrafish_anatomy def: "Floor plate that is part of the rhombomere 5." [ZFIN:curator] synonym: "floor plate r5" EXACT [] synonym: "floorplate r5" EXACT [] xref: TAO:0000764 xref: ZFIN:ZDB-ANAT-020309-141 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0000823 ! rhombomere 5 relationship: part_of ZFA:0001258 ! floor plate rhombomere region relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000765 name: floor plate rhombomere 8 namespace: zebrafish_anatomy def: "Floor plate that is part of the rhombomere 8." [ZFIN:curator] synonym: "floor plate r8" EXACT [] synonym: "floorplate r8" EXACT [] xref: TAO:0000765 xref: ZFIN:ZDB-ANAT-020309-142 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0000153 ! rhombomere 8 relationship: part_of ZFA:0001258 ! floor plate rhombomere region relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000766 name: granular layer valvula cerebelli namespace: zebrafish_anatomy def: "Portion of tissue which is part of the valvula cerebelli and consists largely of axons and dendrites." [ZFIN:curator] xref: TAO:0000766 xref: ZFIN:ZDB-ANAT-020309-143 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000603 ! valvula cerebelli relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000767 name: hypaxial region somite 11 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000767 xref: ZFIN:ZDB-ANAT-020309-144 is_a: ZFA:0001085 ! hypaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000801 ! myotome somite 11 relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0000768 name: hypaxial region somite 14 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000768 xref: ZFIN:ZDB-ANAT-020309-145 is_a: ZFA:0001085 ! hypaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000044 ! myotome somite 14 relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0000769 name: hypaxial region somite 17 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000769 xref: ZFIN:ZDB-ANAT-020309-146 is_a: ZFA:0001085 ! hypaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001015 ! myotome somite 17 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000770 name: hypaxial region somite 2 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000770 xref: ZFIN:ZDB-ANAT-020309-147 is_a: ZFA:0001085 ! hypaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001016 ! myotome somite 2 relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000771 name: hypaxial region somite 22 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000771 xref: ZFIN:ZDB-ANAT-020309-148 is_a: ZFA:0001085 ! hypaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001017 ! myotome somite 22 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000772 name: hypaxial region somite 25 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000772 xref: ZFIN:ZDB-ANAT-020309-149 is_a: ZFA:0001085 ! hypaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001018 ! myotome somite 25 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000773 name: fast muscle cell somite 12 namespace: zebrafish_anatomy synonym: "fast muscle cells somite 12" EXACT PLURAL [] xref: TAO:0000773 xref: ZFIN:ZDB-ANAT-020309-15 is_a: ZFA:0009117 ! fast muscle cell relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000926 ! myotome somite 12 relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0000774 name: hypaxial region somite 28 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000774 xref: ZFIN:ZDB-ANAT-020309-150 is_a: ZFA:0001085 ! hypaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001019 ! myotome somite 28 relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000775 name: hypaxial region somite 30 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000775 xref: ZFIN:ZDB-ANAT-020309-151 is_a: ZFA:0001085 ! hypaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001020 ! myotome somite 30 relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000776 name: hypaxial region somite 6 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000776 xref: ZFIN:ZDB-ANAT-020309-152 is_a: ZFA:0001085 ! hypaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001021 ! myotome somite 6 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000777 name: hypaxial region somite 9 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000777 xref: ZFIN:ZDB-ANAT-020309-153 is_a: ZFA:0001085 ! hypaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001022 ! myotome somite 9 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000778 name: spinal cord interneuron namespace: zebrafish_anatomy def: "A CNS interneuron located in the spinal cord." [ZFIN:curator] synonym: "interneurons spinal cord" EXACT PLURAL [] xref: CL:0005000 xref: TAO:0000778 xref: ZFIN:ZDB-ANAT-020309-154 is_a: ZFA:0009191 ! CNS interneuron relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000075 ! spinal cord relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000779 name: lateral forebrain bundle telencephalon namespace: zebrafish_anatomy synonym: "lateral forebrain bundles telencephalon" EXACT PLURAL [] xref: TAO:0000779 xref: ZFIN:ZDB-ANAT-020309-155 is_a: ZFA:0000597 ! telencephalic white matter relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0007012 ! lateral forebrain bundle relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000780 name: lateral wall diencephalon namespace: zebrafish_anatomy xref: TAO:0000780 xref: ZFIN:ZDB-ANAT-020309-156 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0000101 ! diencephalon relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000781 name: lateral wall rhombomere 1 namespace: zebrafish_anatomy xref: TAO:0000781 xref: ZFIN:ZDB-ANAT-020309-157 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0001031 ! rhombomere 1 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000782 name: lateral wall rhombomere 4 namespace: zebrafish_anatomy xref: TAO:0000782 xref: ZFIN:ZDB-ANAT-020309-158 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0001032 ! rhombomere 4 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000783 name: lateral wall rhombomere 7 namespace: zebrafish_anatomy xref: TAO:0000783 xref: ZFIN:ZDB-ANAT-020309-159 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0000949 ! rhombomere 7 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000784 name: fast muscle cell somite 15 namespace: zebrafish_anatomy synonym: "fast muscle cells somite 15" EXACT PLURAL [] xref: TAO:0000784 xref: ZFIN:ZDB-ANAT-020309-16 is_a: ZFA:0009117 ! fast muscle cell relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000802 ! myotome somite 15 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000785 name: lateral wall telencephalon namespace: zebrafish_anatomy xref: TAO:0000785 xref: ZFIN:ZDB-ANAT-020309-160 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0000079 ! telencephalon relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000786 name: medial migration pathway mesenchyme namespace: zebrafish_anatomy xref: TAO:0000786 xref: ZFIN:ZDB-ANAT-020309-161 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000999 ! mesenchyme derived from trunk neural crest relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000787 name: mesenchyme derived from head neural crest namespace: zebrafish_anatomy xref: TAO:0000787 xref: ZFIN:ZDB-ANAT-020309-162 is_a: ZFA:0000113 ! head mesenchyme relationship: end ZFS:0000028 ! Segmentation:26+ somites relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0000788 name: mesenchyme dorsal fin namespace: zebrafish_anatomy xref: TAO:0000788 xref: ZFIN:ZDB-ANAT-020309-163 is_a: ZFA:0000393 ! mesenchyme relationship: end ZFS:0000035 ! Larval:Protruding-mouth relationship: part_of ZFA:0001173 ! dorsal fin relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0000789 name: mesoderm pectoral fin bud namespace: zebrafish_anatomy synonym: "mesoderm pectoral fin buds" EXACT PLURAL [] xref: TAO:0000789 xref: ZFIN:ZDB-ANAT-020309-164 is_a: ZFA:0000041 ! mesoderm relationship: end ZFS:0000030 ! Pharyngula:Prim-15 relationship: part_of ZFA:0000141 ! pectoral fin bud relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000790 name: muscle pioneer somite 10 namespace: zebrafish_anatomy synonym: "muscle pioneers somite 10" EXACT PLURAL [] xref: TAO:0000790 xref: ZFIN:ZDB-ANAT-020309-165 is_a: ZFA:0001086 ! muscle pioneer relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001047 ! slow muscle cell somite 10 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000791 name: muscle pioneer somite 13 namespace: zebrafish_anatomy synonym: "muscle pioneers somite 13" EXACT PLURAL [] xref: TAO:0000791 xref: ZFIN:ZDB-ANAT-020309-166 is_a: ZFA:0001086 ! muscle pioneer relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001048 ! slow muscle cell somite 13 relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0000792 name: muscle pioneer somite 16 namespace: zebrafish_anatomy synonym: "muscle pioneers somite 16" EXACT PLURAL [] xref: TAO:0000792 xref: ZFIN:ZDB-ANAT-020309-167 is_a: ZFA:0001086 ! muscle pioneer relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001049 ! slow muscle cell somite 16 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000793 name: muscle pioneer somite 19 namespace: zebrafish_anatomy synonym: "muscle pioneers somite 19" EXACT PLURAL [] xref: TAO:0000793 xref: ZFIN:ZDB-ANAT-020309-168 is_a: ZFA:0001086 ! muscle pioneer relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001050 ! slow muscle cell somite 19 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000794 name: muscle pioneer somite 22 namespace: zebrafish_anatomy synonym: "muscle pioneers somite 22" EXACT PLURAL [] xref: TAO:0000794 xref: ZFIN:ZDB-ANAT-020309-169 is_a: ZFA:0001086 ! muscle pioneer relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000844 ! slow muscle cell somite 22 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000795 name: fast muscle cell somite 18 namespace: zebrafish_anatomy synonym: "fast muscle cells somite 18" EXACT PLURAL [] xref: TAO:0000795 xref: ZFIN:ZDB-ANAT-020309-17 is_a: ZFA:0009117 ! fast muscle cell relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000803 ! myotome somite 18 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000796 name: muscle pioneer somite 25 namespace: zebrafish_anatomy synonym: "muscle pioneers somite 25" EXACT PLURAL [] xref: TAO:0000796 xref: ZFIN:ZDB-ANAT-020309-170 is_a: ZFA:0001086 ! muscle pioneer relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000845 ! slow muscle cell somite 25 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000797 name: muscle pioneer somite 28 namespace: zebrafish_anatomy synonym: "muscle pioneers somite 28" EXACT PLURAL [] xref: TAO:0000797 xref: ZFIN:ZDB-ANAT-020309-171 is_a: ZFA:0001086 ! muscle pioneer relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000846 ! slow muscle cell somite 28 relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000798 name: muscle pioneer somite 30 namespace: zebrafish_anatomy synonym: "muscle pioneers somite 30" EXACT PLURAL [] xref: TAO:0000798 xref: ZFIN:ZDB-ANAT-020309-172 is_a: ZFA:0001086 ! muscle pioneer relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000847 ! slow muscle cell somite 30 relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000799 name: muscle pioneer somite 6 namespace: zebrafish_anatomy synonym: "muscle pioneers somite 6" EXACT PLURAL [] xref: TAO:0000799 xref: ZFIN:ZDB-ANAT-020309-173 is_a: ZFA:0001086 ! muscle pioneer relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000848 ! slow muscle cell somite 6 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000800 name: muscle pioneer somite 9 namespace: zebrafish_anatomy synonym: "muscle pioneers somite 9" EXACT PLURAL [] xref: TAO:0000800 xref: ZFIN:ZDB-ANAT-020309-174 is_a: ZFA:0001086 ! muscle pioneer relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000850 ! slow muscle cell somite 9 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000801 name: myotome somite 11 namespace: zebrafish_anatomy def: "Portion of the somite giving rise to body wall muscle masses." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000801 xref: ZFIN:ZDB-ANAT-020309-175 is_a: ZFA:0001056 ! myotome relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000725 ! somite 11 relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0000802 name: myotome somite 15 namespace: zebrafish_anatomy def: "Portion of the somite giving rise to body wall muscle masses." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000802 xref: ZFIN:ZDB-ANAT-020309-176 is_a: ZFA:0001056 ! myotome relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000852 ! somite 15 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000803 name: myotome somite 18 namespace: zebrafish_anatomy def: "Portion of the somite giving rise to body wall muscle masses." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000803 xref: ZFIN:ZDB-ANAT-020309-177 is_a: ZFA:0001056 ! myotome relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000853 ! somite 18 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000804 name: myotome somite 20 namespace: zebrafish_anatomy def: "Portion of the somite giving rise to body wall muscle masses." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000804 xref: ZFIN:ZDB-ANAT-020309-178 is_a: ZFA:0001056 ! myotome relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000156 ! somite 20 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000805 name: myotome somite 23 namespace: zebrafish_anatomy def: "Portion of the somite giving rise to body wall muscle masses." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000805 xref: ZFIN:ZDB-ANAT-020309-179 is_a: ZFA:0001056 ! myotome relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000730 ! somite 23 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000806 name: fast muscle cell somite 20 namespace: zebrafish_anatomy synonym: "fast muscle cells somite 20" EXACT PLURAL [] xref: TAO:0000806 xref: ZFIN:ZDB-ANAT-020309-18 is_a: ZFA:0009117 ! fast muscle cell relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000804 ! myotome somite 20 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000807 name: myotome somite 26 namespace: zebrafish_anatomy def: "Portion of the somite giving rise to body wall muscle masses." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000807 xref: ZFIN:ZDB-ANAT-020309-180 is_a: ZFA:0001056 ! myotome relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000074 ! somite 26 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000808 name: myotome somite 29 namespace: zebrafish_anatomy def: "Portion of the somite giving rise to body wall muscle masses." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000808 xref: ZFIN:ZDB-ANAT-020309-181 is_a: ZFA:0001056 ! myotome relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000981 ! somite 29 relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000809 name: myotome somite 4 namespace: zebrafish_anatomy def: "Portion of the somite giving rise to body wall muscle masses." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000809 xref: ZFIN:ZDB-ANAT-020309-182 is_a: ZFA:0001056 ! myotome relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000857 ! somite 4 relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000810 name: myotome somite 7 namespace: zebrafish_anatomy def: "Portion of the somite giving rise to body wall muscle masses." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000810 xref: ZFIN:ZDB-ANAT-020309-183 is_a: ZFA:0001056 ! myotome relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000733 ! somite 7 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000811 name: neural crest diencephalon namespace: zebrafish_anatomy def: "Cranial neural crest that is part of the diencephalon." [ZFIN:curator] synonym: "diencephalic neural crest" EXACT [] xref: TAO:0000811 xref: ZFIN:ZDB-ANAT-020309-184 is_a: ZFA:0001194 ! cranial neural crest relationship: end ZFS:0000028 ! Segmentation:26+ somites relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000812 name: neural crest telencephalon namespace: zebrafish_anatomy def: "Cranial neural crest that is part of the telencephalon." [ZFIN:curator] xref: TAO:0000812 xref: ZFIN:ZDB-ANAT-020309-185 is_a: ZFA:0001194 ! cranial neural crest relationship: end ZFS:0000028 ! Segmentation:26+ somites relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000813 name: infraorbital lateral line neuromast namespace: zebrafish_anatomy def: "Neuromast that is part of the infraorbital lateral line. (Also see Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:ZDB-PUB-961014-576] synonym: "neuromast infraorbital" EXACT [] synonym: "neuromasts infraorbital" EXACT PLURAL [] xref: TAO:0000813 xref: ZFIN:ZDB-ANAT-020309-186 is_a: ZFA:0000243 ! neuromast relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000524 ! infraorbital lateral line relationship: start ZFS:0000036 ! Larval:Day 4 [Term] id: ZFA:0000814 name: opercular lateral line neuromast namespace: zebrafish_anatomy def: "Neuromast that is part of the opercular lateral line. (Also see Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:ZDB-PUB-961014-576] synonym: "neuromast opercular" EXACT [] synonym: "neuromasts opercular" EXACT PLURAL [] xref: TAO:0000814 xref: ZFIN:ZDB-ANAT-020309-187 is_a: ZFA:0000243 ! neuromast relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000424 ! opercular lateral line relationship: start ZFS:0000036 ! Larval:Day 4 [Term] id: ZFA:0000815 name: nucleus of the medial longitudinal fasciculus medulla oblongata namespace: zebrafish_anatomy xref: TAO:0000815 xref: ZFIN:ZDB-ANAT-020309-188 is_a: ZFA:0001658 ! hindbrain nucleus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000545 ! medulla oblongata relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000816 name: oral epithelium namespace: zebrafish_anatomy def: "The epithelium that lines the oral cavity. The oral epithelium epithelial cells with many short microvilli as well as mucous cells, rodlet cells and taste buds." [ZFIN:ZDB-PUB-060921-12, ZFIN:ZDB-PUB-091204-24] xref: TAO:0000816 xref: ZFIN:ZDB-ANAT-020309-189 is_a: ZFA:0001486 ! epithelium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000590 ! oral region relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0000817 name: fast muscle cell somite 23 namespace: zebrafish_anatomy synonym: "fast muscle cells somite 23" EXACT PLURAL [] xref: TAO:0000817 xref: ZFIN:ZDB-ANAT-020309-19 is_a: ZFA:0009117 ! fast muscle cell relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000805 ! myotome somite 23 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000818 name: vagal neural crest namespace: zebrafish_anatomy def: "Vagal neural crest is adjacent to the first seven somites gives rise to both ganglionic and ectomesenchymal derivatives." [ZFIN:curator] synonym: "post-otic neural crest" EXACT [] xref: TAO:0000818 xref: ZFIN:ZDB-ANAT-060816-2 is_a: ZFA:0000045 ! neural crest relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000819 name: postcommissural nucleus of ventral telencephalon namespace: zebrafish_anatomy def: "Periventricular nucleus which is contiguous with the supracommissural nucleus of the ventral telencephalon. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] synonym: "area ventralis telencephali, nucleus postcommissuralis" EXACT [] synonym: "postcommissural nucleus of V" EXACT [] xref: TAO:0000819 xref: ZFIN:ZDB-ANAT-020309-191 is_a: ZFA:0001666 ! periventricular nucleus of ventral telencephalon relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000820 name: presumptive neuron neural tube namespace: zebrafish_anatomy synonym: "presumptive neurons neural tube" EXACT PLURAL [] xref: TAO:0000820 xref: ZFIN:ZDB-ANAT-020309-192 is_a: ZFA:0001105 ! embryonic structure relationship: end ZFS:0000027 ! Segmentation:20-25 somites relationship: part_of ZFA:0001135 ! neural tube relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000821 name: primary neuron hindbrain namespace: zebrafish_anatomy synonym: "primary neurons hindbrain" EXACT PLURAL [] xref: TAO:0000821 xref: ZFIN:ZDB-ANAT-020309-195 is_a: ZFA:0009242 ! primary neuron relationship: end ZFS:0000028 ! Segmentation:26+ somites relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000822 name: rhombomere 2 namespace: zebrafish_anatomy def: "Hindbrain segment or neuromere." [ZFIN:ZDB-PUB-961014-576] synonym: "r2" EXACT [] xref: TAO:0000822 xref: ZFIN:ZDB-ANAT-020309-196 is_a: ZFA:0001064 ! rhombomere relationship: develops_from ZFA:0001208 ! presumptive rhombomere 2 relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000823 name: rhombomere 5 namespace: zebrafish_anatomy def: "Hindbrain segment or neuromere." [ZFIN:ZDB-PUB-961014-576] synonym: "r5" EXACT [] xref: TAO:0000823 xref: ZFIN:ZDB-ANAT-020309-197 is_a: ZFA:0001064 ! rhombomere relationship: develops_from ZFA:0001211 ! presumptive rhombomere 5 relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000824 name: roof plate rhombomere 2 namespace: zebrafish_anatomy xref: TAO:0000824 xref: ZFIN:ZDB-ANAT-020309-198 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0000822 ! rhombomere 2 relationship: part_of ZFA:0001311 ! roof plate rhombomere region relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000825 name: roof plate rhombomere 6 namespace: zebrafish_anatomy xref: TAO:0000825 xref: ZFIN:ZDB-ANAT-020309-199 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0000069 ! rhombomere 6 relationship: part_of ZFA:0001311 ! roof plate rhombomere region relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000826 name: central nucleus torus semicircularis namespace: zebrafish_anatomy def: "Midbrain nucleus which is part of the torus semicircularis and is the target of ascending octavolateralis systems related to audition. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] synonym: "central nucleus of semicircular torus" EXACT [] synonym: "nucleus centralis tori semicircularis" EXACT [] xref: TAO:0000826 xref: ZFIN:ZDB-ANAT-020309-2 is_a: ZFA:0001665 ! midbrain nucleus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000599 ! torus semicircularis relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000827 name: fast muscle cell somite 26 namespace: zebrafish_anatomy synonym: "fast muscle cells somite 26" EXACT PLURAL [] xref: TAO:0000827 xref: ZFIN:ZDB-ANAT-020309-20 is_a: ZFA:0009117 ! fast muscle cell relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000807 ! myotome somite 26 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000828 name: roof plate rhombomere 5 namespace: zebrafish_anatomy xref: TAO:0000828 xref: ZFIN:ZDB-ANAT-020309-200 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0000823 ! rhombomere 5 relationship: part_of ZFA:0001311 ! roof plate rhombomere region relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000829 name: sclerotome somite 11 namespace: zebrafish_anatomy def: "Medial ventral region of the somite that will form vertebral cartilages." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000829 xref: ZFIN:ZDB-ANAT-020309-201 is_a: ZFA:0001080 ! sclerotome relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000725 ! somite 11 relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0000830 name: sclerotome somite 14 namespace: zebrafish_anatomy def: "Medial ventral region of the somite that will form vertebral cartilages." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000830 xref: ZFIN:ZDB-ANAT-020309-202 is_a: ZFA:0001080 ! sclerotome relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000726 ! somite 14 relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0000831 name: sclerotome somite 17 namespace: zebrafish_anatomy def: "Medial ventral region of the somite that will form vertebral cartilages." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000831 xref: ZFIN:ZDB-ANAT-020309-203 is_a: ZFA:0001080 ! sclerotome relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000727 ! somite 17 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000832 name: sclerotome somite 2 namespace: zebrafish_anatomy def: "Medial ventral region of the somite that will form vertebral cartilages." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000832 xref: ZFIN:ZDB-ANAT-020309-204 is_a: ZFA:0001080 ! sclerotome relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000728 ! somite 2 relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000833 name: sclerotome somite 22 namespace: zebrafish_anatomy def: "Medial ventral region of the somite that will form vertebral cartilages." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000833 xref: ZFIN:ZDB-ANAT-020309-205 is_a: ZFA:0001080 ! sclerotome relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000978 ! somite 22 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000834 name: sclerotome somite 25 namespace: zebrafish_anatomy def: "Medial ventral region of the somite that will form vertebral cartilages." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000834 xref: ZFIN:ZDB-ANAT-020309-206 is_a: ZFA:0001080 ! sclerotome relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000980 ! somite 25 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000835 name: sclerotome somite 28 namespace: zebrafish_anatomy def: "Medial ventral region of the somite that will form vertebral cartilages." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000835 xref: ZFIN:ZDB-ANAT-020309-207 is_a: ZFA:0001080 ! sclerotome relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000856 ! somite 28 relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000836 name: sclerotome somite 30 namespace: zebrafish_anatomy def: "Medial ventral region of the somite that will form vertebral cartilages." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000836 xref: ZFIN:ZDB-ANAT-020309-208 is_a: ZFA:0001080 ! sclerotome relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000157 ! somite 30 relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000837 name: sclerotome somite 6 namespace: zebrafish_anatomy def: "Medial ventral region of the somite that will form vertebral cartilages." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000837 xref: ZFIN:ZDB-ANAT-020309-209 is_a: ZFA:0001080 ! sclerotome relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000982 ! somite 6 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000838 name: fast muscle cell somite 29 namespace: zebrafish_anatomy synonym: "fast muscle cells somite 29" EXACT PLURAL [] xref: TAO:0000838 xref: ZFIN:ZDB-ANAT-020309-21 is_a: ZFA:0009117 ! fast muscle cell relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000808 ! myotome somite 29 relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000839 name: sclerotome somite 9 namespace: zebrafish_anatomy def: "Medial ventral region of the somite that will form vertebral cartilages." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000839 xref: ZFIN:ZDB-ANAT-020309-210 is_a: ZFA:0001080 ! sclerotome relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000983 ! somite 9 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000840 name: slow muscle cell somite 11 namespace: zebrafish_anatomy synonym: "slow muscle cells somite 11" EXACT PLURAL [] xref: TAO:0000840 xref: ZFIN:ZDB-ANAT-020309-211 is_a: ZFA:0009116 ! slow muscle cell relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000801 ! myotome somite 11 relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0000841 name: slow muscle cell somite 14 namespace: zebrafish_anatomy synonym: "slow muscle cells somite 14" EXACT PLURAL [] xref: TAO:0000841 xref: ZFIN:ZDB-ANAT-020309-212 is_a: ZFA:0009116 ! slow muscle cell relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000044 ! myotome somite 14 relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0000842 name: slow muscle cell somite 17 namespace: zebrafish_anatomy synonym: "slow muscle cells somite 17" EXACT PLURAL [] xref: TAO:0000842 xref: ZFIN:ZDB-ANAT-020309-213 is_a: ZFA:0009116 ! slow muscle cell relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001015 ! myotome somite 17 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000843 name: slow muscle cell somite 2 namespace: zebrafish_anatomy synonym: "slow muscle cells somite 2" EXACT PLURAL [] xref: TAO:0000843 xref: ZFIN:ZDB-ANAT-020309-214 is_a: ZFA:0009116 ! slow muscle cell relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001016 ! myotome somite 2 relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000844 name: slow muscle cell somite 22 namespace: zebrafish_anatomy synonym: "slow muscle cells somite 22" EXACT PLURAL [] xref: TAO:0000844 xref: ZFIN:ZDB-ANAT-020309-215 is_a: ZFA:0009116 ! slow muscle cell relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001017 ! myotome somite 22 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000845 name: slow muscle cell somite 25 namespace: zebrafish_anatomy synonym: "slow muscle cells somite 25" EXACT PLURAL [] xref: TAO:0000845 xref: ZFIN:ZDB-ANAT-020309-216 is_a: ZFA:0009116 ! slow muscle cell relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001018 ! myotome somite 25 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000846 name: slow muscle cell somite 28 namespace: zebrafish_anatomy synonym: "slow muscle cells somite 28" EXACT PLURAL [] xref: TAO:0000846 xref: ZFIN:ZDB-ANAT-020309-217 is_a: ZFA:0009116 ! slow muscle cell relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001019 ! myotome somite 28 relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000847 name: slow muscle cell somite 30 namespace: zebrafish_anatomy synonym: "slow muscle cells somite 30" EXACT PLURAL [] xref: TAO:0000847 xref: ZFIN:ZDB-ANAT-020309-218 is_a: ZFA:0009116 ! slow muscle cell relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001020 ! myotome somite 30 relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000848 name: slow muscle cell somite 6 namespace: zebrafish_anatomy synonym: "slow muscle cells somite 6" EXACT PLURAL [] xref: TAO:0000848 xref: ZFIN:ZDB-ANAT-020309-219 is_a: ZFA:0009116 ! slow muscle cell relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001021 ! myotome somite 6 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000849 name: fast muscle cell somite 4 namespace: zebrafish_anatomy synonym: "fast muscle cells somite 4" EXACT PLURAL [] xref: TAO:0000849 xref: ZFIN:ZDB-ANAT-020309-22 is_a: ZFA:0009117 ! fast muscle cell relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000809 ! myotome somite 4 relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000850 name: slow muscle cell somite 9 namespace: zebrafish_anatomy synonym: "slow muscle cells somite 9" EXACT PLURAL [] xref: TAO:0000850 xref: ZFIN:ZDB-ANAT-020309-220 is_a: ZFA:0009116 ! slow muscle cell relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001022 ! myotome somite 9 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000851 name: somite 12 namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000851 xref: ZFIN:ZDB-ANAT-020309-221 is_a: ZFA:0000155 ! somite relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0000852 name: somite 15 namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000852 xref: ZFIN:ZDB-ANAT-020309-222 is_a: ZFA:0000155 ! somite relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000853 name: somite 18 namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000853 xref: ZFIN:ZDB-ANAT-020309-223 is_a: ZFA:0000155 ! somite relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000854 name: somite 21 namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000854 xref: ZFIN:ZDB-ANAT-020309-224 is_a: ZFA:0000155 ! somite relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000855 name: somite 24 namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000855 xref: ZFIN:ZDB-ANAT-020309-225 is_a: ZFA:0000155 ! somite relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000856 name: somite 28 namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000856 xref: ZFIN:ZDB-ANAT-020309-226 is_a: ZFA:0000155 ! somite relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000857 name: somite 4 namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000857 xref: ZFIN:ZDB-ANAT-020309-227 is_a: ZFA:0000155 ! somite relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000858 name: somite 8 namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000858 xref: ZFIN:ZDB-ANAT-020309-228 is_a: ZFA:0000155 ! somite relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000859 name: specialized hemal arch and spine namespace: zebrafish_anatomy synonym: "ha(pu)" EXACT [] synonym: "hemal arch (preural)" EXACT [ZFIN:ZDB-PUB-011008-1] synonym: "specialized haemal arch and spine" EXACT [] synonym: "specialized hemal arches and spines" EXACT PLURAL [] xref: TAO:0000859 xref: ZFIN:ZDB-ANAT-020309-229 is_a: ZFA:0001591 ! endochondral bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000862 ! caudal fin skeleton relationship: start ZFS:0000036 ! Larval:Day 4 [Term] id: ZFA:0000860 name: fast muscle cell somite 7 namespace: zebrafish_anatomy synonym: "fast muscle cells somite 7" EXACT PLURAL [] xref: TAO:0000860 xref: ZFIN:ZDB-ANAT-020309-23 is_a: ZFA:0009117 ! fast muscle cell relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000810 ! myotome somite 7 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000861 name: ventral oblique extraocular muscle namespace: zebrafish_anatomy synonym: "ventral oblique extraocular muscles" EXACT PLURAL [] xref: TAO:0000861 xref: ZFIN:ZDB-ANAT-020309-230 is_a: ZFA:0005145 ! muscle relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000511 ! extraocular musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000862 name: caudal fin skeleton namespace: zebrafish_anatomy xref: TAO:0000862 xref: ZFIN:ZDB-ANAT-020309-231 is_a: ZFA:0001123 ! axial fin skeleton relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001058 ! caudal fin relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000863 name: dermatocranium namespace: zebrafish_anatomy def: "Anatomical cluster that is part of the cranium and composed of dermally derived bones." [ZFIN:curator] synonym: "dermal bone cranium" EXACT [] xref: TAO:0000863 xref: ZFIN:ZDB-ANAT-020309-232 is_a: ZFA:0001478 ! anatomical cluster relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000737 ! cranium relationship: start ZFS:0000032 ! Pharyngula:High-pec [Term] id: ZFA:0000864 name: epaxial region somite 1 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000864 xref: ZFIN:ZDB-ANAT-020309-233 is_a: ZFA:0001084 ! epaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000924 ! myotome somite 1 relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000865 name: epaxial region somite 12 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000865 xref: ZFIN:ZDB-ANAT-020309-234 is_a: ZFA:0001084 ! epaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000926 ! myotome somite 12 relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0000866 name: epaxial region somite 15 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000866 xref: ZFIN:ZDB-ANAT-020309-235 is_a: ZFA:0001084 ! epaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000802 ! myotome somite 15 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000867 name: epaxial region somite 18 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000867 xref: ZFIN:ZDB-ANAT-020309-236 is_a: ZFA:0001084 ! epaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000803 ! myotome somite 18 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000868 name: epaxial region somite 20 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000868 xref: ZFIN:ZDB-ANAT-020309-237 is_a: ZFA:0001084 ! epaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000804 ! myotome somite 20 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000869 name: epaxial region somite 23 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000869 xref: ZFIN:ZDB-ANAT-020309-238 is_a: ZFA:0001084 ! epaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000805 ! myotome somite 23 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000870 name: epaxial region somite 26 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000870 xref: ZFIN:ZDB-ANAT-020309-239 is_a: ZFA:0001084 ! epaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000807 ! myotome somite 26 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000871 name: floor plate diencephalic region namespace: zebrafish_anatomy def: "Floor plate that is part of the diencephalon." [ZFIN:curator] synonym: "floorplate diencephalon" EXACT [] xref: TAO:0000871 xref: ZFIN:ZDB-ANAT-020309-24 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0000022 ! floor plate relationship: part_of ZFA:0000101 ! diencephalon relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000872 name: epaxial region somite 29 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000872 xref: ZFIN:ZDB-ANAT-020309-240 is_a: ZFA:0001084 ! epaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000808 ! myotome somite 29 relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000873 name: epaxial region somite 4 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000873 xref: ZFIN:ZDB-ANAT-020309-241 is_a: ZFA:0001084 ! epaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000809 ! myotome somite 4 relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000874 name: epaxial region somite 7 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000874 xref: ZFIN:ZDB-ANAT-020309-242 is_a: ZFA:0001084 ! epaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000810 ! myotome somite 7 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000875 name: facial neural crest namespace: zebrafish_anatomy def: "Cranial neural crest that is part of the facial region." [ZFIN:curator] xref: TAO:0000875 xref: ZFIN:ZDB-ANAT-020309-243 is_a: ZFA:0001194 ! cranial neural crest relationship: end ZFS:0000028 ! Segmentation:26+ somites relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000876 name: fast muscle cell somite 11 namespace: zebrafish_anatomy synonym: "fast muscle cells somite 11" EXACT PLURAL [] xref: TAO:0000876 xref: ZFIN:ZDB-ANAT-020309-244 is_a: ZFA:0009117 ! fast muscle cell relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000801 ! myotome somite 11 relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0000877 name: fast muscle cell somite 14 namespace: zebrafish_anatomy synonym: "fast muscle cells somite 14" EXACT PLURAL [] xref: TAO:0000877 xref: ZFIN:ZDB-ANAT-020309-245 is_a: ZFA:0009117 ! fast muscle cell relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000044 ! myotome somite 14 relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0000878 name: fast muscle cell somite 17 namespace: zebrafish_anatomy synonym: "fast muscle cells somite 17" EXACT PLURAL [] xref: TAO:0000878 xref: ZFIN:ZDB-ANAT-020309-246 is_a: ZFA:0009117 ! fast muscle cell relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001015 ! myotome somite 17 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000879 name: fast muscle cell somite 2 namespace: zebrafish_anatomy synonym: "fast muscle cells somite 2" EXACT PLURAL [] xref: TAO:0000879 xref: ZFIN:ZDB-ANAT-020309-247 is_a: ZFA:0009117 ! fast muscle cell relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001016 ! myotome somite 2 relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000880 name: fast muscle cell somite 22 namespace: zebrafish_anatomy synonym: "fast muscle cells somite 22" EXACT PLURAL [] xref: TAO:0000880 xref: ZFIN:ZDB-ANAT-020309-248 is_a: ZFA:0009117 ! fast muscle cell relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001017 ! myotome somite 22 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000881 name: fast muscle cell somite 25 namespace: zebrafish_anatomy synonym: "fast muscle cells somite 25" EXACT PLURAL [] xref: TAO:0000881 xref: ZFIN:ZDB-ANAT-020309-249 is_a: ZFA:0009117 ! fast muscle cell relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001018 ! myotome somite 25 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000882 name: floor plate rhombomere 1 namespace: zebrafish_anatomy def: "Floor plate that is part of the rhombomere 1." [ZFIN:curator] synonym: "floor plate r1" EXACT [] xref: TAO:0000882 xref: ZFIN:ZDB-ANAT-020309-25 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0001031 ! rhombomere 1 relationship: part_of ZFA:0001258 ! floor plate rhombomere region relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000883 name: fast muscle cell somite 28 namespace: zebrafish_anatomy synonym: "fast muscle cells somite 28" EXACT PLURAL [] xref: TAO:0000883 xref: ZFIN:ZDB-ANAT-020309-250 is_a: ZFA:0009117 ! fast muscle cell relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001019 ! myotome somite 28 relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000884 name: fast muscle cell somite 30 namespace: zebrafish_anatomy synonym: "fast muscle cells somite 30" EXACT PLURAL [] xref: TAO:0000884 xref: ZFIN:ZDB-ANAT-020309-251 is_a: ZFA:0009117 ! fast muscle cell relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001020 ! myotome somite 30 relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000885 name: fast muscle cell somite 6 namespace: zebrafish_anatomy synonym: "fast muscle cells somite 6" EXACT PLURAL [] xref: TAO:0000885 xref: ZFIN:ZDB-ANAT-020309-252 is_a: ZFA:0009117 ! fast muscle cell relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001021 ! myotome somite 6 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000886 name: fast muscle cell somite 9 namespace: zebrafish_anatomy synonym: "fast muscle cells somite 9" EXACT PLURAL [] xref: TAO:0000886 xref: ZFIN:ZDB-ANAT-020309-253 is_a: ZFA:0009117 ! fast muscle cell relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001022 ! myotome somite 9 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000887 name: floor plate neural rod namespace: zebrafish_anatomy def: "Floor plate that is part of the neural rod." [ZFIN:curator] synonym: "floorplate neural rod" EXACT [] xref: TAO:0000887 xref: ZFIN:ZDB-ANAT-020309-254 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000026 ! Segmentation:14-19 somites relationship: part_of ZFA:0000022 ! floor plate relationship: part_of ZFA:0000133 ! neural rod relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000888 name: floor plate rhombomere 3 namespace: zebrafish_anatomy def: "Floor plate that is part of the rhombomere 3." [ZFIN:curator] synonym: "floor plate r3" EXACT [] synonym: "floorplate r3" EXACT [] xref: TAO:0000888 xref: ZFIN:ZDB-ANAT-020309-255 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0000948 ! rhombomere 3 relationship: part_of ZFA:0001258 ! floor plate rhombomere region relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000889 name: floor plate rhombomere 6 namespace: zebrafish_anatomy def: "Floor plate that is part of the rhombomere 6." [ZFIN:curator] synonym: "floor plate r6" EXACT [] synonym: "floorplate r6" EXACT [] xref: TAO:0000889 xref: ZFIN:ZDB-ANAT-020309-256 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0000069 ! rhombomere 6 relationship: part_of ZFA:0001258 ! floor plate rhombomere region relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000890 name: floor plate spinal cord region namespace: zebrafish_anatomy def: "Floor plate that is part of the spinal cord." [ZFIN:curator] synonym: "floorplate spinal cord" EXACT [] xref: TAO:0000890 xref: ZFIN:ZDB-ANAT-020309-257 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001434 ! floor plate neural tube relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0000022 ! floor plate relationship: part_of ZFA:0000075 ! spinal cord relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000891 name: hypaxial region somite 1 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000891 xref: ZFIN:ZDB-ANAT-020309-258 is_a: ZFA:0001085 ! hypaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000924 ! myotome somite 1 relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000892 name: hypaxial region somite 12 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000892 xref: ZFIN:ZDB-ANAT-020309-259 is_a: ZFA:0001085 ! hypaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000926 ! myotome somite 12 relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0000893 name: floor plate rhombomere 4 namespace: zebrafish_anatomy def: "Floor plate that is part of the rhombomere 4." [ZFIN:curator] synonym: "floor plate r4" EXACT [] synonym: "floorplate r4" EXACT [] xref: TAO:0000893 xref: ZFIN:ZDB-ANAT-020309-26 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0001032 ! rhombomere 4 relationship: part_of ZFA:0001258 ! floor plate rhombomere region relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000894 name: hypaxial region somite 15 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000894 xref: ZFIN:ZDB-ANAT-020309-260 is_a: ZFA:0001085 ! hypaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000802 ! myotome somite 15 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000895 name: hypaxial region somite 18 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000895 xref: ZFIN:ZDB-ANAT-020309-261 is_a: ZFA:0001085 ! hypaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000803 ! myotome somite 18 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000896 name: hypaxial region somite 20 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000896 xref: ZFIN:ZDB-ANAT-020309-262 is_a: ZFA:0001085 ! hypaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000804 ! myotome somite 20 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000897 name: hypaxial region somite 23 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000897 xref: ZFIN:ZDB-ANAT-020309-263 is_a: ZFA:0001085 ! hypaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000805 ! myotome somite 23 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000898 name: hypaxial region somite 26 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000898 xref: ZFIN:ZDB-ANAT-020309-264 is_a: ZFA:0001085 ! hypaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000807 ! myotome somite 26 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000899 name: hypaxial region somite 29 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000899 xref: ZFIN:ZDB-ANAT-020309-265 is_a: ZFA:0001085 ! hypaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000808 ! myotome somite 29 relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000900 name: hypaxial region somite 4 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000900 xref: ZFIN:ZDB-ANAT-020309-266 is_a: ZFA:0001085 ! hypaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000809 ! myotome somite 4 relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000901 name: hypaxial region somite 7 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000901 xref: ZFIN:ZDB-ANAT-020309-267 is_a: ZFA:0001085 ! hypaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000810 ! myotome somite 7 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000902 name: hypural musculature namespace: zebrafish_anatomy synonym: "hypural muscles" EXACT PLURAL [] xref: TAO:0000902 xref: ZFIN:ZDB-ANAT-020309-268 is_a: ZFA:0005145 ! muscle relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000628 ! caudal fin musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000903 name: interpeduncular nucleus tegmentum namespace: zebrafish_anatomy xref: TAO:0000903 xref: ZFIN:ZDB-ANAT-020309-269 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000160 ! tegmentum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000904 name: floor plate rhombomere 7 namespace: zebrafish_anatomy def: "Floor plate that is part of the rhombomere 7." [ZFIN:curator] synonym: "floor plate r7" EXACT [] synonym: "floorplate r7" EXACT [] xref: TAO:0000904 xref: ZFIN:ZDB-ANAT-020309-27 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0000949 ! rhombomere 7 relationship: part_of ZFA:0001258 ! floor plate rhombomere region relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000905 name: lateral mesenchyme derived from mesoderm namespace: zebrafish_anatomy xref: TAO:0000905 xref: ZFIN:ZDB-ANAT-020309-270 is_a: ZFA:0000081 ! trunk mesenchyme relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000906 name: lateral wall midbrain namespace: zebrafish_anatomy xref: TAO:0000906 xref: ZFIN:ZDB-ANAT-020309-271 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0000128 ! midbrain relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000907 name: lateral wall rhombomere 2 namespace: zebrafish_anatomy xref: TAO:0000907 xref: ZFIN:ZDB-ANAT-020309-272 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0000822 ! rhombomere 2 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000908 name: lateral wall rhombomere 5 namespace: zebrafish_anatomy xref: TAO:0000908 xref: ZFIN:ZDB-ANAT-020309-273 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0000823 ! rhombomere 5 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000909 name: lateral wall rhombomere 8 namespace: zebrafish_anatomy xref: TAO:0000909 xref: ZFIN:ZDB-ANAT-020309-274 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0000153 ! rhombomere 8 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000910 name: medial forebrain bundle telencephalon namespace: zebrafish_anatomy synonym: "medial forebrain bundles telencephalon" EXACT PLURAL [] xref: TAO:0000910 xref: ZFIN:ZDB-ANAT-020309-275 is_a: ZFA:0000597 ! telencephalic white matter relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005111 ! medial forebrain bundle relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000911 name: medial pterygiophores dorsal fin namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-020309-276 is_obsolete: true [Term] id: ZFA:0000912 name: mesenchyme median fin fold namespace: zebrafish_anatomy xref: TAO:0000912 xref: ZFIN:ZDB-ANAT-020309-278 is_a: ZFA:0000393 ! mesenchyme relationship: end ZFS:0000037 ! Larval:Day 5 relationship: part_of ZFA:0000040 ! median fin fold relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0000913 name: molecular layer valvula cerebelli namespace: zebrafish_anatomy def: "Portion of tissue which is part of the valvula cerebelli and contains neuronal cell bodies." [ZFIN:curator] xref: TAO:0000913 xref: ZFIN:ZDB-ANAT-020309-279 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000603 ! valvula cerebelli relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000914 name: floor plate telencephalic region namespace: zebrafish_anatomy def: "Floor plate that is part of the telencephalon." [ZFIN:curator] synonym: "floorplate telencephalon" EXACT [] xref: TAO:0000914 xref: ZFIN:ZDB-ANAT-020309-28 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0000022 ! floor plate relationship: part_of ZFA:0000079 ! telencephalon relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000915 name: muscle pioneer somite 11 namespace: zebrafish_anatomy synonym: "muscle pioneers somite 11" EXACT PLURAL [] xref: TAO:0000915 xref: ZFIN:ZDB-ANAT-020309-280 is_a: ZFA:0001086 ! muscle pioneer relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000840 ! slow muscle cell somite 11 relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0000916 name: muscle pioneer somite 14 namespace: zebrafish_anatomy synonym: "muscle pioneers somite 14" EXACT PLURAL [] xref: TAO:0000916 xref: ZFIN:ZDB-ANAT-020309-281 is_a: ZFA:0001086 ! muscle pioneer relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000841 ! slow muscle cell somite 14 relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0000917 name: muscle pioneer somite 17 namespace: zebrafish_anatomy synonym: "muscle pioneers somite 17" EXACT PLURAL [] xref: TAO:0000917 xref: ZFIN:ZDB-ANAT-020309-282 is_a: ZFA:0001086 ! muscle pioneer relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000842 ! slow muscle cell somite 17 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000918 name: muscle pioneer somite 20 namespace: zebrafish_anatomy synonym: "muscle pioneers somite 20" EXACT PLURAL [] xref: TAO:0000918 xref: ZFIN:ZDB-ANAT-020309-283 is_a: ZFA:0001086 ! muscle pioneer relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000967 ! slow muscle cell somite 20 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000919 name: muscle pioneer somite 23 namespace: zebrafish_anatomy synonym: "muscle pioneers somite 23" EXACT PLURAL [] xref: TAO:0000919 xref: ZFIN:ZDB-ANAT-020309-284 is_a: ZFA:0001086 ! muscle pioneer relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000969 ! slow muscle cell somite 23 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000920 name: muscle pioneer somite 26 namespace: zebrafish_anatomy synonym: "muscle pioneers somite 26" EXACT PLURAL [] xref: TAO:0000920 xref: ZFIN:ZDB-ANAT-020309-285 is_a: ZFA:0001086 ! muscle pioneer relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000970 ! slow muscle cell somite 26 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000921 name: muscle pioneer somite 29 namespace: zebrafish_anatomy synonym: "muscle pioneers somite 29" EXACT PLURAL [] xref: TAO:0000921 xref: ZFIN:ZDB-ANAT-020309-286 is_a: ZFA:0001086 ! muscle pioneer relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000971 ! slow muscle cell somite 29 relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000922 name: muscle pioneer somite 4 namespace: zebrafish_anatomy synonym: "muscle pioneers somite 4" EXACT PLURAL [] xref: TAO:0000922 xref: ZFIN:ZDB-ANAT-020309-287 is_a: ZFA:0001086 ! muscle pioneer relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000972 ! slow muscle cell somite 4 relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000923 name: muscle pioneer somite 7 namespace: zebrafish_anatomy synonym: "muscle pioneers somite 7" EXACT PLURAL [] xref: TAO:0000923 xref: ZFIN:ZDB-ANAT-020309-288 is_a: ZFA:0001086 ! muscle pioneer relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000973 ! slow muscle cell somite 7 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000924 name: myotome somite 1 namespace: zebrafish_anatomy def: "Portion of the somite giving rise to body wall muscle masses." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000924 xref: ZFIN:ZDB-ANAT-020309-289 is_a: ZFA:0001056 ! myotome relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000072 ! somite 1 relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0000925 name: hypaxial region somite 10 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000925 xref: ZFIN:ZDB-ANAT-020309-29 is_a: ZFA:0001085 ! hypaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001013 ! myotome somite 10 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000926 name: myotome somite 12 namespace: zebrafish_anatomy def: "Portion of the somite giving rise to body wall muscle masses." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000926 xref: ZFIN:ZDB-ANAT-020309-290 is_a: ZFA:0001056 ! myotome relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000851 ! somite 12 relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0000927 name: myotome somite 16 namespace: zebrafish_anatomy def: "Portion of the somite giving rise to body wall muscle masses." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000927 xref: ZFIN:ZDB-ANAT-020309-291 is_a: ZFA:0001056 ! myotome relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000976 ! somite 16 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000928 name: myotome somite 19 namespace: zebrafish_anatomy def: "Portion of the somite giving rise to body wall muscle masses." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000928 xref: ZFIN:ZDB-ANAT-020309-292 is_a: ZFA:0001056 ! myotome relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000977 ! somite 19 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000929 name: myotome somite 21 namespace: zebrafish_anatomy def: "Portion of the somite giving rise to body wall muscle masses." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000929 xref: ZFIN:ZDB-ANAT-020309-293 is_a: ZFA:0001056 ! myotome relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000854 ! somite 21 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000930 name: myotome somite 24 namespace: zebrafish_anatomy def: "Portion of the somite giving rise to body wall muscle masses." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000930 xref: ZFIN:ZDB-ANAT-020309-294 is_a: ZFA:0001056 ! myotome relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000855 ! somite 24 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000931 name: myotome somite 27 namespace: zebrafish_anatomy def: "Portion of the somite giving rise to body wall muscle masses." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000931 xref: ZFIN:ZDB-ANAT-020309-295 is_a: ZFA:0001056 ! myotome relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000731 ! somite 27 relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000932 name: myotome somite 3 namespace: zebrafish_anatomy def: "Portion of the somite giving rise to body wall muscle masses." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000932 xref: ZFIN:ZDB-ANAT-020309-296 is_a: ZFA:0001056 ! myotome relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000732 ! somite 3 relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000933 name: myotome somite 5 namespace: zebrafish_anatomy def: "Portion of the somite giving rise to body wall muscle masses." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000933 xref: ZFIN:ZDB-ANAT-020309-297 is_a: ZFA:0001056 ! myotome relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000073 ! somite 5 relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000934 name: myotome somite 8 namespace: zebrafish_anatomy def: "Portion of the somite giving rise to body wall muscle masses." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000934 xref: ZFIN:ZDB-ANAT-020309-298 is_a: ZFA:0001056 ! myotome relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000858 ! somite 8 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000935 name: neural crest midbrain namespace: zebrafish_anatomy def: "Neural crest that is part of the midbrain." [ZFIN:curator] synonym: "mesencephalic neural crest" EXACT [ZFIN:curator] xref: TAO:0000935 xref: ZFIN:ZDB-ANAT-020309-299 is_a: ZFA:0001194 ! cranial neural crest relationship: end ZFS:0000027 ! Segmentation:20-25 somites relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000936 name: dorsal fin distal radial namespace: zebrafish_anatomy def: "Rod-like internal median skeletal support bones of the dorsal fin, which articulate with the lepidotrichia distally." [ZFIN:curator] synonym: "dorsal fin distal radials" EXACT PLURAL [] xref: TAO:0000936 xref: ZFIN:ZDB-ANAT-020309-3 is_a: ZFA:0001647 ! dorsal fin radial relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001419 ! dorsal fin pterygiophore relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0000937 name: hypaxial region somite 13 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000937 xref: ZFIN:ZDB-ANAT-020309-30 is_a: ZFA:0001085 ! hypaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001014 ! myotome somite 13 relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0000938 name: central canal namespace: zebrafish_anatomy def: "Spinal cord structure that is part of the ventricular system and is filled with cerebral-spinal fluid and runs the length of the spinal cord." [ZFIN:curator] synonym: "canalis centralis" EXACT [] synonym: "neural lumen" EXACT [] xref: TAO:0000938 xref: ZFIN:ZDB-ANAT-020309-300 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000075 ! spinal cord relationship: part_of ZFA:0001261 ! ventricular system relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000939 name: middle lateral line neuromast namespace: zebrafish_anatomy def: "Neuromast that is part of the middle lateral line. (Also see Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:ZDB-PUB-961014-576] synonym: "neuromast middle" EXACT [] synonym: "neuromasts middle" EXACT PLURAL [] xref: TAO:0000939 xref: ZFIN:ZDB-ANAT-020309-301 is_a: ZFA:0000243 ! neuromast relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000344 ! middle lateral line relationship: start ZFS:0000036 ! Larval:Day 4 [Term] id: ZFA:0000940 name: posterior lateral line neuromast namespace: zebrafish_anatomy def: "Neuromast that is part of the posterior lateral line. (Also see Anatomical Atlas entry for lateral line by T. Whitfield.) " [ZFIN:ZDB-PUB-961014-576] synonym: "neuromast posterior" EXACT [] synonym: "neuromasts posterior" EXACT PLURAL [] xref: TAO:0000940 xref: ZFIN:ZDB-ANAT-020309-302 is_a: ZFA:0000243 ! neuromast relationship: develops_from ZFA:0001157 ! posterior lateral line primordium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000944 ! posterior lateral line relationship: start ZFS:0000032 ! Pharyngula:High-pec [Term] id: ZFA:0000941 name: nucleus of the medial longitudinal fasciculus synencephalon namespace: zebrafish_anatomy def: "Diencephalic nucleus that is part of the synencephalon, is located adjacent to the caudal commissure, and extends axons into the medial longitudinal fasciculus. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] xref: TAO:0000941 xref: ZFIN:ZDB-ANAT-020309-303 is_a: ZFA:0001659 ! diencephalic nucleus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000293 ! synencephalon relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000943 name: pectoral fin skeleton namespace: zebrafish_anatomy def: "Skeleton that consists of the supporting endochondral proximal and distal radials and the dermal fins rays or lepidotrichia. The pectoral fin skeleton is located in the thoracic region of the body and articulates with the scapula and coracoid." [TAO:curator] xref: TAO:0000943 xref: ZFIN:ZDB-ANAT-020309-305 is_a: ZFA:0000027 ! paired fin skeleton relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001161 ! pectoral fin relationship: start ZFS:0000032 ! Pharyngula:High-pec [Term] id: ZFA:0000944 name: posterior lateral line namespace: zebrafish_anatomy def: "One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator] synonym: "pll" EXACT [] xref: TAO:0000944 xref: ZFIN:ZDB-ANAT-020309-306 is_a: ZFA:0001469 ! lateral line relationship: develops_from ZFA:0001157 ! posterior lateral line primordium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001471 ! posterior lateral line system relationship: start ZFS:0000032 ! Pharyngula:High-pec [Term] id: ZFA:0000946 name: hypaxial region somite 16 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000946 xref: ZFIN:ZDB-ANAT-020309-31 is_a: ZFA:0001085 ! hypaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000927 ! myotome somite 16 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000947 name: dorsal fin proximal radial namespace: zebrafish_anatomy def: "Rod-like internal median skeletal support bones of the dorsal fin, which articulate with the distal radials." [ZFIN:curator] synonym: "dorsal fin proximal radials" EXACT PLURAL [] xref: TAO:0000947 xref: ZFIN:ZDB-ANAT-020309-310 is_a: ZFA:0001647 ! dorsal fin radial relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001419 ! dorsal fin pterygiophore relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0000948 name: rhombomere 3 namespace: zebrafish_anatomy def: "Hindbrain segment or neuromere." [ZFIN:ZDB-PUB-961014-576] synonym: "r3" EXACT [] xref: TAO:0000948 xref: ZFIN:ZDB-ANAT-020309-311 is_a: ZFA:0001064 ! rhombomere relationship: develops_from ZFA:0001213 ! presumptive rhombomere 3 relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000949 name: rhombomere 7 namespace: zebrafish_anatomy def: "Hindbrain segment or neuromere." [ZFIN:ZDB-PUB-961014-576] synonym: "r7" EXACT [] xref: TAO:0000949 xref: ZFIN:ZDB-ANAT-020309-312 is_a: ZFA:0001064 ! rhombomere relationship: develops_from ZFA:0001209 ! presumptive rhombomere 7 relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000950 name: roof plate rhombomere 3 namespace: zebrafish_anatomy xref: TAO:0000950 xref: ZFIN:ZDB-ANAT-020309-313 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0000948 ! rhombomere 3 relationship: part_of ZFA:0001311 ! roof plate rhombomere region relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000951 name: roof plate rhombomere 7 namespace: zebrafish_anatomy xref: TAO:0000951 xref: ZFIN:ZDB-ANAT-020309-314 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0000949 ! rhombomere 7 relationship: part_of ZFA:0001311 ! roof plate rhombomere region relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000952 name: sclerotome somite 1 namespace: zebrafish_anatomy def: "Medial ventral region of the somite that will form vertebral cartilages." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000952 xref: ZFIN:ZDB-ANAT-020309-315 is_a: ZFA:0001080 ! sclerotome relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000072 ! somite 1 relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0000953 name: sclerotome somite 12 namespace: zebrafish_anatomy def: "Medial ventral region of the somite that will form vertebral cartilages." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000953 xref: ZFIN:ZDB-ANAT-020309-316 is_a: ZFA:0001080 ! sclerotome relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000851 ! somite 12 relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0000954 name: sclerotome somite 15 namespace: zebrafish_anatomy def: "Medial ventral region of the somite that will form vertebral cartilages." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000954 xref: ZFIN:ZDB-ANAT-020309-317 is_a: ZFA:0001080 ! sclerotome relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000852 ! somite 15 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000955 name: sclerotome somite 18 namespace: zebrafish_anatomy def: "Medial ventral region of the somite that will form vertebral cartilages." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000955 xref: ZFIN:ZDB-ANAT-020309-318 is_a: ZFA:0001080 ! sclerotome relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000853 ! somite 18 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000956 name: sclerotome somite 20 namespace: zebrafish_anatomy def: "Medial ventral region of the somite that will form vertebral cartilages." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000956 xref: ZFIN:ZDB-ANAT-020309-319 is_a: ZFA:0001080 ! sclerotome relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000156 ! somite 20 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000957 name: hypaxial region somite 19 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000957 xref: ZFIN:ZDB-ANAT-020309-32 is_a: ZFA:0001085 ! hypaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000928 ! myotome somite 19 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000958 name: sclerotome somite 23 namespace: zebrafish_anatomy def: "Medial ventral region of the somite that will form vertebral cartilages." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000958 xref: ZFIN:ZDB-ANAT-020309-320 is_a: ZFA:0001080 ! sclerotome relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000730 ! somite 23 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000959 name: sclerotome somite 26 namespace: zebrafish_anatomy def: "Medial ventral region of the somite that will form vertebral cartilages." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000959 xref: ZFIN:ZDB-ANAT-020309-321 is_a: ZFA:0001080 ! sclerotome relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000074 ! somite 26 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000960 name: sclerotome somite 29 namespace: zebrafish_anatomy def: "Medial ventral region of the somite that will form vertebral cartilages." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000960 xref: ZFIN:ZDB-ANAT-020309-322 is_a: ZFA:0001080 ! sclerotome relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000981 ! somite 29 relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000961 name: sclerotome somite 4 namespace: zebrafish_anatomy def: "Medial ventral region of the somite that will form vertebral cartilages." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000961 xref: ZFIN:ZDB-ANAT-020309-323 is_a: ZFA:0001080 ! sclerotome relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000857 ! somite 4 relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000962 name: sclerotome somite 7 namespace: zebrafish_anatomy def: "Medial ventral region of the somite that will form vertebral cartilages." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000962 xref: ZFIN:ZDB-ANAT-020309-324 is_a: ZFA:0001080 ! sclerotome relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000733 ! somite 7 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000963 name: slow muscle cell somite 1 namespace: zebrafish_anatomy synonym: "slow muscle cells somite 1" EXACT PLURAL [] xref: TAO:0000963 xref: ZFIN:ZDB-ANAT-020309-325 is_a: ZFA:0009116 ! slow muscle cell relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000924 ! myotome somite 1 relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000964 name: slow muscle cell somite 12 namespace: zebrafish_anatomy synonym: "slow muscle cells somite 12" EXACT PLURAL [] xref: TAO:0000964 xref: ZFIN:ZDB-ANAT-020309-326 is_a: ZFA:0009116 ! slow muscle cell relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000926 ! myotome somite 12 relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0000965 name: slow muscle cell somite 15 namespace: zebrafish_anatomy synonym: "slow muscle cells somite 15" EXACT PLURAL [] xref: TAO:0000965 xref: ZFIN:ZDB-ANAT-020309-327 is_a: ZFA:0009116 ! slow muscle cell relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000802 ! myotome somite 15 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000966 name: slow muscle cell somite 18 namespace: zebrafish_anatomy synonym: "slow muscle cells somite 18" EXACT PLURAL [] xref: TAO:0000966 xref: ZFIN:ZDB-ANAT-020309-328 is_a: ZFA:0009116 ! slow muscle cell relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000803 ! myotome somite 18 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000967 name: slow muscle cell somite 20 namespace: zebrafish_anatomy synonym: "slow muscle cells somite 20" EXACT PLURAL [] xref: TAO:0000967 xref: ZFIN:ZDB-ANAT-020309-329 is_a: ZFA:0009116 ! slow muscle cell relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000804 ! myotome somite 20 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000968 name: hypaxial region somite 21 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000968 xref: ZFIN:ZDB-ANAT-020309-33 is_a: ZFA:0001085 ! hypaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000929 ! myotome somite 21 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000969 name: slow muscle cell somite 23 namespace: zebrafish_anatomy synonym: "slow muscle cells somite 23" EXACT PLURAL [] xref: TAO:0000969 xref: ZFIN:ZDB-ANAT-020309-330 is_a: ZFA:0009116 ! slow muscle cell relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000805 ! myotome somite 23 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000970 name: slow muscle cell somite 26 namespace: zebrafish_anatomy synonym: "slow muscle cells somite 26" EXACT PLURAL [] xref: TAO:0000970 xref: ZFIN:ZDB-ANAT-020309-331 is_a: ZFA:0009116 ! slow muscle cell relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000807 ! myotome somite 26 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000971 name: slow muscle cell somite 29 namespace: zebrafish_anatomy synonym: "slow muscle cells somite 29" EXACT PLURAL [] xref: TAO:0000971 xref: ZFIN:ZDB-ANAT-020309-332 is_a: ZFA:0009116 ! slow muscle cell relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000808 ! myotome somite 29 relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000972 name: slow muscle cell somite 4 namespace: zebrafish_anatomy synonym: "slow muscle cells somite 4" EXACT PLURAL [] xref: TAO:0000972 xref: ZFIN:ZDB-ANAT-020309-333 is_a: ZFA:0009116 ! slow muscle cell relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000809 ! myotome somite 4 relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000973 name: slow muscle cell somite 7 namespace: zebrafish_anatomy synonym: "slow muscle cells somite 7" EXACT PLURAL [] xref: TAO:0000973 xref: ZFIN:ZDB-ANAT-020309-334 is_a: ZFA:0009116 ! slow muscle cell relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000810 ! myotome somite 7 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000974 name: somite 10 namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000974 xref: ZFIN:ZDB-ANAT-020309-335 is_a: ZFA:0000155 ! somite relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000975 name: somite 13 namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000975 xref: ZFIN:ZDB-ANAT-020309-336 is_a: ZFA:0000155 ! somite relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0000976 name: somite 16 namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000976 xref: ZFIN:ZDB-ANAT-020309-337 is_a: ZFA:0000155 ! somite relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000977 name: somite 19 namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000977 xref: ZFIN:ZDB-ANAT-020309-338 is_a: ZFA:0000155 ! somite relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000978 name: somite 22 namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000978 xref: ZFIN:ZDB-ANAT-020309-339 is_a: ZFA:0000155 ! somite relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000979 name: hypaxial region somite 24 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000979 xref: ZFIN:ZDB-ANAT-020309-34 is_a: ZFA:0001085 ! hypaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000930 ! myotome somite 24 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000980 name: somite 25 namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000980 xref: ZFIN:ZDB-ANAT-020309-340 is_a: ZFA:0000155 ! somite relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000981 name: somite 29 namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000981 xref: ZFIN:ZDB-ANAT-020309-341 is_a: ZFA:0000155 ! somite relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000982 name: somite 6 namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000982 xref: ZFIN:ZDB-ANAT-020309-342 is_a: ZFA:0000155 ! somite relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000983 name: somite 9 namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000983 xref: ZFIN:ZDB-ANAT-020309-343 is_a: ZFA:0000155 ! somite relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000984 name: superior reticular formation tegmentum namespace: zebrafish_anatomy xref: TAO:0000984 xref: ZFIN:ZDB-ANAT-020309-344 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000160 ! tegmentum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000985 name: ventral rhombencephalic commissure medulla oblongata namespace: zebrafish_anatomy xref: TAO:0000985 xref: ZFIN:ZDB-ANAT-020309-345 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000545 ! medulla oblongata relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000986 name: hypaxial region somite 27 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000986 xref: ZFIN:ZDB-ANAT-020309-35 is_a: ZFA:0001085 ! hypaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000931 ! myotome somite 27 relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000987 name: hypaxial region somite 3 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000987 xref: ZFIN:ZDB-ANAT-020309-36 is_a: ZFA:0001085 ! hypaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000932 ! myotome somite 3 relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000988 name: hypaxial region somite 5 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000988 xref: ZFIN:ZDB-ANAT-020309-37 is_a: ZFA:0001085 ! hypaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000933 ! myotome somite 5 relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000989 name: hypaxial region somite 8 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000989 xref: ZFIN:ZDB-ANAT-020309-38 is_a: ZFA:0001085 ! hypaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000934 ! myotome somite 8 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000990 name: intermediate mesenchyme namespace: zebrafish_anatomy xref: TAO:0000990 xref: ZFIN:ZDB-ANAT-020309-39 is_a: ZFA:0000081 ! trunk mesenchyme relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000991 name: epaxial region somite 10 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000991 xref: ZFIN:ZDB-ANAT-020309-4 is_a: ZFA:0001084 ! epaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001013 ! myotome somite 10 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000992 name: lateral migration pathway mesenchyme namespace: zebrafish_anatomy xref: TAO:0000992 xref: ZFIN:ZDB-ANAT-020309-41 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000999 ! mesenchyme derived from trunk neural crest relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000993 name: lateral wall neural rod namespace: zebrafish_anatomy def: "Portion of tissue located at either side of the neural rod." [ZFIN:curator] xref: TAO:0000993 xref: ZFIN:ZDB-ANAT-020309-42 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000026 ! Segmentation:14-19 somites relationship: part_of ZFA:0000133 ! neural rod relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000994 name: lateral wall rhombomere 3 namespace: zebrafish_anatomy xref: TAO:0000994 xref: ZFIN:ZDB-ANAT-020309-43 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0000948 ! rhombomere 3 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000995 name: lateral wall rhombomere 6 namespace: zebrafish_anatomy xref: TAO:0000995 xref: ZFIN:ZDB-ANAT-020309-44 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0000069 ! rhombomere 6 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000996 name: lateral wall spinal cord namespace: zebrafish_anatomy xref: TAO:0000996 xref: ZFIN:ZDB-ANAT-020309-45 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0000075 ! spinal cord relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000997 name: medial funicular nucleus trigeminal nuclei namespace: zebrafish_anatomy xref: TAO:0000997 xref: ZFIN:ZDB-ANAT-020309-46 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000433 ! sensory trigeminal nucleus relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000998 name: mesenchyme derived from head mesoderm namespace: zebrafish_anatomy xref: TAO:0000998 xref: ZFIN:ZDB-ANAT-020309-47 is_a: ZFA:0000113 ! head mesenchyme relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000999 name: mesenchyme derived from trunk neural crest namespace: zebrafish_anatomy xref: TAO:0000999 xref: ZFIN:ZDB-ANAT-020309-48 is_a: ZFA:0000081 ! trunk mesenchyme relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0001000 name: mesenchyme pectoral fin namespace: zebrafish_anatomy synonym: "mesenchyme pectoral fins" EXACT PLURAL [] xref: TAO:0001000 xref: ZFIN:ZDB-ANAT-020309-49 is_a: ZFA:0000393 ! mesenchyme relationship: develops_from ZFA:0000789 ! mesoderm pectoral fin bud relationship: end ZFS:0000035 ! Larval:Protruding-mouth relationship: part_of ZFA:0001161 ! pectoral fin relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0001001 name: epaxial region somite 13 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0001001 xref: ZFIN:ZDB-ANAT-020309-5 is_a: ZFA:0001084 ! epaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001014 ! myotome somite 13 relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0001002 name: peripheral motor axons namespace: zebrafish_anatomy xref: TAO:0001002 xref: ZFIN:ZDB-ANAT-020309-50 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000012 ! central nervous system relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0001003 name: muscle pioneer somite 12 namespace: zebrafish_anatomy synonym: "muscle pioneers somite 12" EXACT PLURAL [] xref: TAO:0001003 xref: ZFIN:ZDB-ANAT-020309-51 is_a: ZFA:0001086 ! muscle pioneer relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000964 ! slow muscle cell somite 12 relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0001004 name: muscle pioneer somite 15 namespace: zebrafish_anatomy synonym: "muscle pioneers somite 15" EXACT PLURAL [] xref: TAO:0001004 xref: ZFIN:ZDB-ANAT-020309-52 is_a: ZFA:0001086 ! muscle pioneer relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000965 ! slow muscle cell somite 15 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0001005 name: muscle pioneer somite 18 namespace: zebrafish_anatomy synonym: "muscle pioneers somite 18" EXACT PLURAL [] xref: TAO:0001005 xref: ZFIN:ZDB-ANAT-020309-53 is_a: ZFA:0001086 ! muscle pioneer relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000966 ! slow muscle cell somite 18 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0001006 name: muscle pioneer somite 21 namespace: zebrafish_anatomy synonym: "muscle pioneers somite 21" EXACT PLURAL [] xref: TAO:0001006 xref: ZFIN:ZDB-ANAT-020309-54 is_a: ZFA:0001086 ! muscle pioneer relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000719 ! slow muscle cell somite 21 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0001007 name: muscle pioneer somite 24 namespace: zebrafish_anatomy synonym: "muscle pioneers somite 24" EXACT PLURAL [] xref: TAO:0001007 xref: ZFIN:ZDB-ANAT-020309-55 is_a: ZFA:0001086 ! muscle pioneer relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000720 ! slow muscle cell somite 24 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0001008 name: muscle pioneer somite 27 namespace: zebrafish_anatomy synonym: "muscle pioneers somite 27" EXACT PLURAL [] xref: TAO:0001008 xref: ZFIN:ZDB-ANAT-020309-56 is_a: ZFA:0001086 ! muscle pioneer relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000721 ! slow muscle cell somite 27 relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001009 name: muscle pioneer somite 3 namespace: zebrafish_anatomy synonym: "muscle pioneers somite 3" EXACT PLURAL [] xref: TAO:0001009 xref: ZFIN:ZDB-ANAT-020309-57 is_a: ZFA:0001086 ! muscle pioneer relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000722 ! slow muscle cell somite 3 relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0001010 name: muscle pioneer somite 5 namespace: zebrafish_anatomy synonym: "muscle pioneers somite 5" EXACT PLURAL [] xref: TAO:0001010 xref: ZFIN:ZDB-ANAT-020309-58 is_a: ZFA:0001086 ! muscle pioneer relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000723 ! slow muscle cell somite 5 relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0001011 name: muscle pioneer somite 8 namespace: zebrafish_anatomy synonym: "muscle pioneers somite 8" EXACT PLURAL [] xref: TAO:0001011 xref: ZFIN:ZDB-ANAT-020309-59 is_a: ZFA:0001086 ! muscle pioneer relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000724 ! slow muscle cell somite 8 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001012 name: epaxial region somite 16 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0001012 xref: ZFIN:ZDB-ANAT-020309-6 is_a: ZFA:0001084 ! epaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000927 ! myotome somite 16 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0001013 name: myotome somite 10 namespace: zebrafish_anatomy def: "Portion of the somite giving rise to body wall muscle masses." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0001013 xref: ZFIN:ZDB-ANAT-020309-60 is_a: ZFA:0001056 ! myotome relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000974 ! somite 10 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001014 name: myotome somite 13 namespace: zebrafish_anatomy def: "Portion of the somite giving rise to body wall muscle masses." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0001014 xref: ZFIN:ZDB-ANAT-020309-61 is_a: ZFA:0001056 ! myotome relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000975 ! somite 13 relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0001015 name: myotome somite 17 namespace: zebrafish_anatomy def: "Portion of the somite giving rise to body wall muscle masses." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0001015 xref: ZFIN:ZDB-ANAT-020309-62 is_a: ZFA:0001056 ! myotome relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000727 ! somite 17 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0001016 name: myotome somite 2 namespace: zebrafish_anatomy def: "Portion of the somite giving rise to body wall muscle masses." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0001016 xref: ZFIN:ZDB-ANAT-020309-63 is_a: ZFA:0001056 ! myotome relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000728 ! somite 2 relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0001017 name: myotome somite 22 namespace: zebrafish_anatomy def: "Portion of the somite giving rise to body wall muscle masses." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0001017 xref: ZFIN:ZDB-ANAT-020309-64 is_a: ZFA:0001056 ! myotome relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000978 ! somite 22 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0001018 name: myotome somite 25 namespace: zebrafish_anatomy def: "Portion of the somite giving rise to body wall muscle masses." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0001018 xref: ZFIN:ZDB-ANAT-020309-65 is_a: ZFA:0001056 ! myotome relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000980 ! somite 25 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0001019 name: myotome somite 28 namespace: zebrafish_anatomy def: "Portion of the somite giving rise to body wall muscle masses." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0001019 xref: ZFIN:ZDB-ANAT-020309-66 is_a: ZFA:0001056 ! myotome relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000856 ! somite 28 relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001020 name: myotome somite 30 namespace: zebrafish_anatomy def: "Portion of the somite giving rise to body wall muscle masses." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0001020 xref: ZFIN:ZDB-ANAT-020309-67 is_a: ZFA:0001056 ! myotome relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000157 ! somite 30 relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001021 name: myotome somite 6 namespace: zebrafish_anatomy def: "Portion of the somite giving rise to body wall muscle masses." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0001021 xref: ZFIN:ZDB-ANAT-020309-68 is_a: ZFA:0001056 ! myotome relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000982 ! somite 6 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001022 name: myotome somite 9 namespace: zebrafish_anatomy def: "Portion of the somite giving rise to body wall muscle masses." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0001022 xref: ZFIN:ZDB-ANAT-020309-69 is_a: ZFA:0001056 ! myotome relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000983 ! somite 9 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001023 name: epaxial region somite 19 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0001023 xref: ZFIN:ZDB-ANAT-020309-7 is_a: ZFA:0001084 ! epaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000928 ! myotome somite 19 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0001024 name: trunk neural crest namespace: zebrafish_anatomy xref: TAO:0001024 xref: ZFIN:ZDB-ANAT-020309-70 is_a: ZFA:0000045 ! neural crest relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001025 name: occipital lateral line neuromast namespace: zebrafish_anatomy def: "Neuromast that is part of the occipital lateral line. (Also see Anatomical Atlas entry for lateral line by T. Whitfield.) " [ZFIN:ZDB-PUB-961014-576] synonym: "neuromast occipital" EXACT [] synonym: "neuromasts occipital" EXACT PLURAL [] xref: TAO:0001025 xref: ZFIN:ZDB-ANAT-020309-72 is_a: ZFA:0000243 ! neuromast relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000400 ! occipital lateral line relationship: start ZFS:0000036 ! Larval:Day 4 [Term] id: ZFA:0001026 name: supraorbital lateral line neuromast namespace: zebrafish_anatomy def: "Neuromast that is part of the supraorbital lateral line. (Also see Anatomical Atlas entry for lateral line by T. Whitfield.) " [ZFIN:ZDB-PUB-961014-576] synonym: "neuromast supraorbital" EXACT [] synonym: "neuromasts supraorbital" EXACT PLURAL [] xref: TAO:0001026 xref: ZFIN:ZDB-ANAT-020309-73 is_a: ZFA:0000243 ! neuromast relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000443 ! supraorbital lateral line relationship: start ZFS:0000036 ! Larval:Day 4 [Term] id: ZFA:0001027 name: oral cavity namespace: zebrafish_anatomy synonym: "buccal cavity" EXACT [] xref: TAO:0001027 xref: ZFIN:ZDB-ANAT-020309-74 is_a: ZFA:0001643 ! anatomical space relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000590 ! oral region relationship: start ZFS:0000035 ! Larval:Protruding-mouth [Term] id: ZFA:0001028 name: hypurapophysis namespace: zebrafish_anatomy def: "The paired bony lateral extensions off the parhypural." [ZFIN:ZDB-PUB-011008-1] synonym: "hypurapophyses" EXACT PLURAL [] synonym: "parhypurapophysis" EXACT [] synonym: "parhypurapophysis process" EXACT [] xref: TAO:0001028 xref: ZFIN:ZDB-ANAT-020309-75 is_a: ZFA:0000859 ! specialized hemal arch and spine relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000438 ! parhypural relationship: start ZFS:0000040 ! Larval:Days 14-20 [Term] id: ZFA:0001029 name: inner limiting membrane namespace: zebrafish_anatomy synonym: "inner limiting membranes" EXACT PLURAL [] xref: TAO:0001029 xref: ZFIN:ZDB-ANAT-061101-7 is_a: ZFA:0000382 ! acellular anatomical structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000046 ! retinal neural layer relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001030 name: epaxial region somite 21 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0001030 xref: ZFIN:ZDB-ANAT-020309-8 is_a: ZFA:0001084 ! epaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000929 ! myotome somite 21 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0001031 name: rhombomere 1 namespace: zebrafish_anatomy def: "Hindbrain segment or neuromere." [ZFIN:ZDB-PUB-961014-576] synonym: "r1" EXACT [] xref: TAO:0001031 xref: ZFIN:ZDB-ANAT-020309-81 is_a: ZFA:0001064 ! rhombomere relationship: develops_from ZFA:0001207 ! presumptive rhombomere 1 relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001032 name: rhombomere 4 namespace: zebrafish_anatomy def: "Hindbrain segment or neuromere." [ZFIN:ZDB-PUB-961014-576] synonym: "r4" EXACT [] xref: TAO:0001032 xref: ZFIN:ZDB-ANAT-020309-82 is_a: ZFA:0001064 ! rhombomere relationship: develops_from ZFA:0001212 ! presumptive rhombomere 4 relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001033 name: roof plate rhombomere 1 namespace: zebrafish_anatomy xref: TAO:0001033 xref: ZFIN:ZDB-ANAT-020309-83 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0001031 ! rhombomere 1 relationship: part_of ZFA:0001311 ! roof plate rhombomere region relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001034 name: roof plate rhombomere 4 namespace: zebrafish_anatomy xref: TAO:0001034 xref: ZFIN:ZDB-ANAT-020309-84 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0001032 ! rhombomere 4 relationship: part_of ZFA:0001311 ! roof plate rhombomere region relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001035 name: roof plate rhombomere 8 namespace: zebrafish_anatomy xref: TAO:0001035 xref: ZFIN:ZDB-ANAT-020309-85 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0000153 ! rhombomere 8 relationship: part_of ZFA:0001311 ! roof plate rhombomere region relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001036 name: sclerotome somite 10 namespace: zebrafish_anatomy def: "Medial ventral region of the somite that will form vertebral cartilages." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0001036 xref: ZFIN:ZDB-ANAT-020309-86 is_a: ZFA:0001080 ! sclerotome relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000974 ! somite 10 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001037 name: sclerotome somite 13 namespace: zebrafish_anatomy def: "Medial ventral region of the somite that will form vertebral cartilages." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0001037 xref: ZFIN:ZDB-ANAT-020309-87 is_a: ZFA:0001080 ! sclerotome relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000975 ! somite 13 relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0001038 name: sclerotome somite 16 namespace: zebrafish_anatomy def: "Medial ventral region of the somite that will form vertebral cartilages." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0001038 xref: ZFIN:ZDB-ANAT-020309-88 is_a: ZFA:0001080 ! sclerotome relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000976 ! somite 16 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0001039 name: sclerotome somite 19 namespace: zebrafish_anatomy def: "Medial ventral region of the somite that will form vertebral cartilages." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0001039 xref: ZFIN:ZDB-ANAT-020309-89 is_a: ZFA:0001080 ! sclerotome relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000977 ! somite 19 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0001040 name: epaxial region somite 24 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0001040 xref: ZFIN:ZDB-ANAT-020309-9 is_a: ZFA:0001084 ! epaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000930 ! myotome somite 24 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0001041 name: sclerotome somite 21 namespace: zebrafish_anatomy def: "Medial ventral region of the somite that will form vertebral cartilages." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0001041 xref: ZFIN:ZDB-ANAT-020309-90 is_a: ZFA:0001080 ! sclerotome relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000854 ! somite 21 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0001042 name: sclerotome somite 24 namespace: zebrafish_anatomy def: "Medial ventral region of the somite that will form vertebral cartilages." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0001042 xref: ZFIN:ZDB-ANAT-020309-91 is_a: ZFA:0001080 ! sclerotome relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000855 ! somite 24 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0001043 name: sclerotome somite 27 namespace: zebrafish_anatomy def: "Medial ventral region of the somite that will form vertebral cartilages." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0001043 xref: ZFIN:ZDB-ANAT-020309-92 is_a: ZFA:0001080 ! sclerotome relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000731 ! somite 27 relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001044 name: sclerotome somite 3 namespace: zebrafish_anatomy def: "Medial ventral region of the somite that will form vertebral cartilages." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0001044 xref: ZFIN:ZDB-ANAT-020309-93 is_a: ZFA:0001080 ! sclerotome relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000732 ! somite 3 relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0001045 name: sclerotome somite 5 namespace: zebrafish_anatomy def: "Medial ventral region of the somite that will form vertebral cartilages." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0001045 xref: ZFIN:ZDB-ANAT-020309-94 is_a: ZFA:0001080 ! sclerotome relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000073 ! somite 5 relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0001046 name: sclerotome somite 8 namespace: zebrafish_anatomy def: "Medial ventral region of the somite that will form vertebral cartilages." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0001046 xref: ZFIN:ZDB-ANAT-020309-95 is_a: ZFA:0001080 ! sclerotome relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000858 ! somite 8 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001047 name: slow muscle cell somite 10 namespace: zebrafish_anatomy synonym: "slow muscle cells somite 10" EXACT PLURAL [] xref: TAO:0001047 xref: ZFIN:ZDB-ANAT-020309-96 is_a: ZFA:0009116 ! slow muscle cell relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001013 ! myotome somite 10 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001048 name: slow muscle cell somite 13 namespace: zebrafish_anatomy synonym: "slow muscle cells somite 13" EXACT PLURAL [] xref: TAO:0001048 xref: ZFIN:ZDB-ANAT-020309-97 is_a: ZFA:0009116 ! slow muscle cell relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001014 ! myotome somite 13 relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0001049 name: slow muscle cell somite 16 namespace: zebrafish_anatomy synonym: "slow muscle cells somite 16" EXACT PLURAL [] xref: TAO:0001049 xref: ZFIN:ZDB-ANAT-020309-98 is_a: ZFA:0009116 ! slow muscle cell relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000927 ! myotome somite 16 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0001050 name: slow muscle cell somite 19 namespace: zebrafish_anatomy synonym: "slow muscle cells somite 19" EXACT PLURAL [] xref: TAO:0001050 xref: ZFIN:ZDB-ANAT-020309-99 is_a: ZFA:0009116 ! slow muscle cell relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000928 ! myotome somite 19 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0001051 name: caudal division of the internal carotid artery namespace: zebrafish_anatomy synonym: "CaDI" EXACT [] xref: TAO:0001051 xref: ZFIN:ZDB-ANAT-020702-1 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0005081 ! internal carotid artery relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001052 name: primordial hindbrain channel namespace: zebrafish_anatomy def: "The paired vessels that run along the lateral walls of the hindbrain and drain into the anterior cardinal veins." [ZFIN:ZDB-PUB-010205-5] synonym: "medial head vein" EXACT [] synonym: "PHBC" EXACT [] xref: TAO:0001052 xref: ZFIN:ZDB-ANAT-020702-10 is_a: ZFA:0000082 ! vein relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0005297 ! cranial blood vessel relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001053 name: primitive internal carotid artery namespace: zebrafish_anatomy synonym: "PICA" EXACT [] xref: TAO:0001053 xref: ZFIN:ZDB-ANAT-020702-11 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001054 name: lateral dorsal aorta namespace: zebrafish_anatomy def: "Connect the outflow of the aortic arches to the dorsal aorta. The place where the lateral dorsal aorta fuse is called the radix of the aorta." [ZFIN:ZDB-PUB-010205-5] synonym: "LDA" EXACT [] xref: TAO:0001054 xref: ZFIN:ZDB-ANAT-020702-12 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001055 name: pronephric duct opening namespace: zebrafish_anatomy def: "The juncture where the pronephric ducts empty into the cloaca." [ZFIN:curator] synonym: "pronephric duct openings" EXACT PLURAL [] xref: TAO:0001055 xref: ZFIN:ZDB-ANAT-020702-13 is_a: ZFA:0001643 ! anatomical space relationship: end ZFS:0000037 ! Larval:Day 5 relationship: part_of ZFA:0000150 ! pronephric duct relationship: part_of ZFA:0000330 ! cloacal chamber relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0001056 name: myotome namespace: zebrafish_anatomy def: "Portion of the somites giving rise to body wall muscle masses." [ZFIN:ZDB-PUB-961014-576] synonym: "myomeres" EXACT [ZFIN:ZDB-PUB-961014-576] xref: TAO:0001056 xref: ZFIN:ZDB-ANAT-020702-14 is_a: ZFA:0005145 ! muscle relationship: develops_from ZFA:0000155 ! somite relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000473 ! trunk musculature relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0001057 name: intersegmental vein namespace: zebrafish_anatomy def: "Primary intersegmental vessels that are contacted by secondary angiogenic sprouts from the posterior cardinal vein and take on the characteristics of veins. These eventually link with other secondary sprouts from the posterior cardinal vein to form the parachordal vessel." [ZFIN:ZDB-PUB-030908-4] synonym: "ISV" EXACT [] xref: TAO:0001057 xref: ZFIN:ZDB-ANAT-020702-15 is_a: ZFA:0000082 ! vein is_a: ZFA:0001285 ! intersegmental vessel relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000034 ! Hatching:Pec-fin [Term] id: ZFA:0001058 name: caudal fin namespace: zebrafish_anatomy def: "Fin that is the most posterior median fin. It is composed of a complex of three modified centra and modified neural and hemal arches and spines." [ZFIN:ZDB-PUB-011008-1] synonym: "tail" EXACT [] synonym: "tail fin" EXACT [] xref: TAO:0001058 xref: ZFIN:ZDB-ANAT-020702-16 is_a: ZFA:0000108 ! fin relationship: develops_from ZFA:0001069 ! ventral fin fold relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001117 ! post-vent region relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001059 name: cranial division of the internal carotid artery namespace: zebrafish_anatomy synonym: "CrDI" EXACT [] synonym: "rostral division of the internal carotid artery" EXACT [] xref: TAO:0001059 xref: ZFIN:ZDB-ANAT-020702-17 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0005081 ! internal carotid artery relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001060 name: basidorsal namespace: zebrafish_anatomy def: "Basidorsals are bilaterally paired cartilages on the dorsolateral side of the notochord which are replaced by ossified neural arches or dorsal arcocentra. In otophysan fishes, basidorsal 1, bd2, bd3, and bd4 give rise to parts of the Weberian apparatus." [ZFIN:curator] synonym: "arcualia" RELATED [] xref: TAO:0001060 xref: ZFIN:ZDB-ANAT-060331-5 is_a: ZFA:0001457 ! postcranial axial cartilage relationship: end ZFS:0000039 ! Larval:Days 7-13 relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001061 name: intersegmental artery namespace: zebrafish_anatomy synonym: "intersegmental arteries" EXACT PLURAL [] xref: TAO:0001061 xref: ZFIN:ZDB-ANAT-020702-19 is_a: ZFA:0000005 ! artery is_a: ZFA:0001285 ! intersegmental vessel relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000034 ! Hatching:Pec-fin [Term] id: ZFA:0001062 name: primitive mesencephalic artery namespace: zebrafish_anatomy def: "Branches dorsally from the cranial division of the internal carotid artery, then curves caudally along the dorsal medial wall of the eye capsule to drain into the PMBC just rostral to the midbrain hindbrain boundary" [ZFIN:curator] synonym: "PMsA" EXACT [] xref: TAO:0001062 xref: ZFIN:ZDB-ANAT-020702-2 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000032 ! Pharyngula:High-pec relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001063 name: posterior caudal vein namespace: zebrafish_anatomy xref: TAO:0001063 xref: ZFIN:ZDB-ANAT-020702-20 is_a: ZFA:0000082 ! vein relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0005037 ! post-vent vasculature relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001064 name: rhombomere namespace: zebrafish_anatomy def: "A segment of the developing hindbrain." [ZFIN:ZDB-PUB-961014-576] synonym: "hindbrain segment" EXACT [] synonym: "neuromere" RELATED [] synonym: "rhombomeres" EXACT PLURAL [] xref: TAO:0001064 xref: ZFIN:ZDB-ANAT-020702-3 is_a: ZFA:0001328 ! neuromere relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0000029 ! hindbrain relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001065 name: lateral mesoderm namespace: zebrafish_anatomy xref: TAO:0001065 xref: ZFIN:ZDB-ANAT-020702-4 is_a: ZFA:0000041 ! mesoderm relationship: end ZFS:0000027 ! Segmentation:20-25 somites relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0001066 name: neural arch namespace: zebrafish_anatomy def: "A neural arch encloses the neural canal and typically meets its partner to form a neural spine. The neural arch can be a replacement ossification of the basidorsal cartilage or can form directly in membrane bone." [ZFIN:curator] synonym: "dorsal arcocentrum" EXACT [] xref: TAO:0001066 xref: ZFIN:ZDB-ANAT-060331-6 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001060 ! basidorsal relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001189 ! vertebra relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0001067 name: anterior cerebral vein namespace: zebrafish_anatomy synonym: "ACeV" EXACT [] synonym: "rostral cerebral vein" EXACT [] xref: TAO:0001067 xref: ZFIN:ZDB-ANAT-020702-6 is_a: ZFA:0000082 ! vein relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0005297 ! cranial blood vessel relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001068 name: mesencephalic artery namespace: zebrafish_anatomy def: "Develops from the proximal portion of the primitive mesencephalic artery." [ZFIN:ZDB-PUB-010205-5] synonym: "MsA" EXACT [] xref: TAO:0001068 xref: ZFIN:ZDB-ANAT-020702-7 is_a: ZFA:0000005 ! artery relationship: develops_from ZFA:0001062 ! primitive mesencephalic artery relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0001069 name: ventral fin fold namespace: zebrafish_anatomy synonym: "anal fin fold" EXACT [] synonym: "tail fin fold" EXACT [] synonym: "ventral fin" EXACT [] xref: TAO:0001069 xref: ZFIN:ZDB-ANAT-020702-8 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000037 ! Larval:Day 5 relationship: part_of ZFA:0000040 ! median fin fold relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0001070 name: presumptive pronephric mesoderm namespace: zebrafish_anatomy synonym: "nephron primordium" EXACT [] xref: TAO:0001070 xref: ZFIN:ZDB-ANAT-020702-9 is_a: ZFA:0000041 ! mesoderm relationship: end ZFS:0000022 ! Gastrula:Bud relationship: part_of ZFA:0001206 ! intermediate mesoderm relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0001071 name: presumptive neural retina namespace: zebrafish_anatomy def: "Portion of tissue that is the inner layer of the optic cup and will become the neural retina." [ZFIN:curator] synonym: "inner layer optic cup" EXACT [] synonym: "presumptive retinas" EXACT PLURAL [] xref: TAO:0001071 xref: ZFIN:ZDB-ANAT-030922-1 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0001202 ! optic cup relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0001072 name: thyroid follicle namespace: zebrafish_anatomy def: "Portion of tissue formed form thyroid follicle cells that forms along the midline in pharyngeal mesenchyme. The follicles are not encapsulated by connective tissue." [ZFIN:ZDB-PUB-060517-11] synonym: "thyroid follicles" EXACT PLURAL [] xref: TAO:0001072 xref: ZFIN:ZDB-ANAT-030922-10 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0001081 ! thyroid primordium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001158 ! endocrine system relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0001073 name: axial vasculature namespace: zebrafish_anatomy xref: TAO:0001073 xref: ZFIN:ZDB-ANAT-030922-11 is_a: ZFA:0005249 ! vasculature relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0001074 name: taste bud namespace: zebrafish_anatomy synonym: "taste buds" EXACT PLURAL [] xref: TAO:0001074 xref: ZFIN:ZDB-ANAT-030922-12 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001101 ! gustatory system relationship: start ZFS:0000035 ! Larval:Protruding-mouth [Term] id: ZFA:0001075 name: choroidal fissure namespace: zebrafish_anatomy def: "The narrow cleft along the medial wall of the lateral ventricle along the margins of which the choroid plexus is attached; it lies between the upper surface of the thalamus and lateral edge of the fornix in the central part of the ventricle and between the terminal stria and fimbria hippocampi in the inferior horn." [ZFIN:curator] synonym: "choroidal fissures" EXACT PLURAL [] xref: TAO:0001075 xref: ZFIN:ZDB-ANAT-030922-13 is_a: ZFA:0001643 ! anatomical space relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000008 ! brain relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001076 name: intestinal bulb namespace: zebrafish_anatomy def: "This anteriormost portion of the intestine has the most digestive enzymes and the greatest epithelial surface area." [ZFIN:ZDB-PUB-050120-6] synonym: "anterior intestine" EXACT [] xref: TAO:0001076 xref: ZFIN:ZDB-ANAT-030922-14 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001338 ! intestine relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0001077 name: thymus primordium namespace: zebrafish_anatomy def: "A small outgrowth of the pharyngeal epithelium that is the site of lymphocyte cell production." [ZFIN:ZDB-PUB-990414-60] synonym: "thymic rudiment" EXACT [] xref: TAO:0001077 xref: ZFIN:ZDB-ANAT-030922-2 is_a: ZFA:0001486 ! epithelium relationship: develops_from ZFA:0000818 ! vagal neural crest relationship: develops_from ZFA:0001104 ! pharyngeal endoderm relationship: end ZFS:0000035 ! Larval:Protruding-mouth relationship: part_of ZFA:0001159 ! immune system relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0001078 name: thymus namespace: zebrafish_anatomy xref: TAO:0001078 xref: ZFIN:ZDB-ANAT-030922-3 is_a: ZFA:0000496 ! compound organ relationship: develops_from ZFA:0001077 ! thymus primordium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001159 ! immune system relationship: start ZFS:0000035 ! Larval:Protruding-mouth [Term] id: ZFA:0001079 name: blood vasculature namespace: zebrafish_anatomy synonym: "blood vessel" RELATED [] xref: TAO:0001079 xref: ZFIN:ZDB-ANAT-030922-4 is_a: ZFA:0001490 ! cavitated compound organ is_a: ZFA:0005249 ! vasculature relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0001080 name: sclerotome namespace: zebrafish_anatomy def: "Portion of somite that gives rise to skeletal elements." [ZFIN:curator] synonym: "sclerotomes" EXACT PLURAL [] xref: TAO:0001080 xref: ZFIN:ZDB-ANAT-030922-5 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000155 ! somite relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0001081 name: thyroid primordium namespace: zebrafish_anatomy synonym: "thyroid primordia" EXACT PLURAL [] xref: TAO:0001081 xref: ZFIN:ZDB-ANAT-030922-6 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0001104 ! pharyngeal endoderm relationship: end ZFS:0000033 ! Hatching:Long-pec relationship: part_of ZFA:0001158 ! endocrine system relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0001082 name: chordo neural hinge namespace: zebrafish_anatomy def: "Portion of tissue that is posterior to the developing notochord during tail bud extension." [ZFIN:ZDB-PUB-970723-15] xref: TAO:0001082 xref: ZFIN:ZDB-ANAT-030922-7 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0000077 ! tail bud relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0001083 name: ventricular zone namespace: zebrafish_anatomy def: "Proliferative region that is part of the ventricular system." [ZFIN:curator] synonym: "ventricular zones" EXACT PLURAL [] xref: TAO:0001083 xref: ZFIN:ZDB-ANAT-030922-8 is_a: ZFA:0000098 ! proliferative region relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001261 ! ventricular system relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001084 name: epaxial myotome region namespace: zebrafish_anatomy synonym: "epaxial myotome regions" EXACT PLURAL [] xref: TAO:0001084 xref: ZFIN:ZDB-ANAT-031211-12 is_a: ZFA:0005145 ! muscle relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001056 ! myotome relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0001085 name: hypaxial myotome region namespace: zebrafish_anatomy synonym: "hypaxial muscle" EXACT [] xref: TAO:0001085 xref: ZFIN:ZDB-ANAT-031211-13 is_a: ZFA:0005145 ! muscle relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001056 ! myotome relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0001086 name: muscle pioneer namespace: zebrafish_anatomy synonym: "muscle pioneers" EXACT PLURAL [] synonym: "non migratory adaxial cells" EXACT [] xref: TAO:0001086 xref: ZFIN:ZDB-ANAT-031211-14 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0009116 ! slow muscle cell relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0001089 name: myoseptum namespace: zebrafish_anatomy synonym: "myosepta" EXACT PLURAL [] xref: TAO:0001089 xref: ZFIN:ZDB-ANAT-031211-5 is_a: ZFA:0000382 ! acellular anatomical structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001056 ! myotome relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0001093 name: unspecified namespace: zebrafish_anatomy def: "Annotation with this anatomy term indicates that a structure was not specified by the author." [ZFIN:curator] xref: TAO:0001093 xref: ZFIN:ZDB-ANAT-041102-1 is_a: ZFA:0100000 ! zebrafish anatomical entity relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000001 ! Zygote:1-cell [Term] id: ZFA:0001094 name: whole organism namespace: zebrafish_anatomy def: "Anatomical structure that is an individual member of Danio rerio." [ZFIN:curator] synonym: "multi-cellular organism" EXACT [] xref: CARO:0000012 xref: TAO:0001094 xref: ZFIN:ZDB-ANAT-050228-1 is_a: ZFA:0000037 ! anatomical structure relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000001 ! Zygote:1-cell [Term] id: ZFA:0001095 name: immature macula namespace: zebrafish_anatomy synonym: "immature maculae" EXACT PLURAL [] synonym: "immature sensory patch" EXACT [] synonym: "immature sensory patches" EXACT PLURAL [] xref: TAO:0001095 xref: ZFIN:ZDB-ANAT-050228-10 relationship: end ZFS:0000036 ! Larval:Day 4 relationship: part_of ZFA:0000051 ! otic vesicle relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0001096 name: immature anterior macula namespace: zebrafish_anatomy synonym: "immature anterior maculae" EXACT PLURAL [] xref: TAO:0001096 xref: ZFIN:ZDB-ANAT-050228-11 relationship: end ZFS:0000036 ! Larval:Day 4 relationship: part_of ZFA:0001095 ! immature macula relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0001097 name: immature posterior macula namespace: zebrafish_anatomy synonym: "immature posterior maculae" EXACT PLURAL [] xref: TAO:0001097 xref: ZFIN:ZDB-ANAT-050228-12 relationship: end ZFS:0000036 ! Larval:Day 4 relationship: part_of ZFA:0001095 ! immature macula relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0001098 name: immature hair cell anterior macula namespace: zebrafish_anatomy synonym: "immature sensory hair cells anterior macula" EXACT PLURAL [] xref: TAO:0001098 xref: ZFIN:ZDB-ANAT-050228-13 is_a: ZFA:0009366 ! hair cell relationship: end ZFS:0000036 ! Larval:Day 4 relationship: part_of ZFA:0001096 ! immature anterior macula relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0001099 name: immature hair cell posterior macula namespace: zebrafish_anatomy synonym: "immature sensory hair cells posterior macula" EXACT PLURAL [] xref: TAO:0001099 xref: ZFIN:ZDB-ANAT-050228-14 is_a: ZFA:0009366 ! hair cell relationship: end ZFS:0000036 ! Larval:Day 4 relationship: part_of ZFA:0001097 ! immature posterior macula relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0001100 name: hepatic duct namespace: zebrafish_anatomy def: "A duct that carries bile from the liver to the intestine." [ZFIN:curator] xref: TAO:0001100 xref: ZFIN:ZDB-ANAT-050228-15 is_a: ZFA:0005162 ! digestive system duct relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000036 ! liver and biliary system relationship: start ZFS:0000032 ! Pharyngula:High-pec [Term] id: ZFA:0001101 name: gustatory system namespace: zebrafish_anatomy xref: TAO:0001101 xref: ZFIN:ZDB-ANAT-050228-16 is_a: ZFA:0000282 ! sensory system relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000035 ! Larval:Protruding-mouth [Term] id: ZFA:0001104 name: pharyngeal endoderm namespace: zebrafish_anatomy xref: TAO:0001104 xref: ZFIN:ZDB-ANAT-050228-19 is_a: ZFA:0000017 ! endoderm relationship: end ZFS:0000030 ! Pharyngula:Prim-15 relationship: part_of ZFA:0000056 ! pharynx relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001105 name: embryonic structure namespace: zebrafish_anatomy def: "Anatomical structure that is part of the embryo and is comprised of portions of tissue or cells." [ZFIN:curator] synonym: "embryonic structures" EXACT PLURAL [] xref: TAO:0001105 xref: ZFIN:ZDB-ANAT-050228-2 is_a: ZFA:0000037 ! anatomical structure relationship: end ZFS:0000038 ! Larval:Day 6 relationship: part_of ZFA:0001094 ! whole organism relationship: start ZFS:0000001 ! Zygote:1-cell [Term] id: ZFA:0001106 name: pharyngeal pouch namespace: zebrafish_anatomy def: "Outpocketings of pharyngeal endoderm that interdigitate with the neural crest derived pharyngeal arches. The pouches later fuse with the surface ectoderm to form the gill slits." [ZFIN:ZDB-PUB-041029-8] synonym: "pharyngeal pouches" EXACT PLURAL [] xref: TAO:0001106 xref: ZFIN:ZDB-ANAT-050228-20 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001104 ! pharyngeal endoderm relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0000056 ! pharynx relationship: part_of ZFA:0001306 ! pharyngeal arch relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0001107 name: internal gill bud namespace: zebrafish_anatomy synonym: "internal gill buds" EXACT PLURAL [] xref: TAO:0001107 xref: ZFIN:ZDB-ANAT-050228-21 relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0000056 ! pharynx relationship: start ZFS:0000036 ! Larval:Day 4 [Term] id: ZFA:0001108 name: anterior commissure namespace: zebrafish_anatomy def: "Telencephalic white matter (commissure) which connects the two cerebral hemispheres across the midline." [ZFIN:curator] synonym: "commissura anterior" EXACT [] synonym: "commissura rostral" EXACT [] synonym: "rostral commissure" EXACT [] xref: TAO:0001108 xref: ZFIN:ZDB-ANAT-050228-22 is_a: ZFA:0000597 ! telencephalic white matter relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001109 name: oocyte namespace: zebrafish_anatomy alt_id: ZFA:0009008 comment: I think the term we really want is CL:0000023 synonym: "egg" RELATED [] xref: CL:0000023 xref: TAO:0001109 xref: ZFIN:ZDB-ANAT-050228-23 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001110 ! ovarian follicle relationship: start ZFS:0000042 ! Juvenile:Days 30-44 [Term] id: ZFA:0001110 name: ovarian follicle namespace: zebrafish_anatomy def: "Oocyte development of zebrafish has been divided into five stages based on morphological criteria and on physiological and biochemical events. Stage I follicles (less than 140 microns) are primary growth stage, stage II follicles (140-340 microns) are cortical alveolus stage, stage III (340-690 microns) are vitellogenesis, stage IV (690-730 microns) are oocyte maturation, and stage V follicles are matured egg." [ZFIN:ZDB-PUB-961014-1020] synonym: "egg follicle" EXACT [] xref: TAO:0001110 xref: ZFIN:ZDB-ANAT-050228-24 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000403 ! ovary relationship: start ZFS:0000042 ! Juvenile:Days 30-44 [Term] id: ZFA:0001111 name: zona radiata namespace: zebrafish_anatomy synonym: "vitelline envelope" EXACT [] xref: TAO:0001111 xref: ZFIN:ZDB-ANAT-050228-25 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001110 ! ovarian follicle relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001112 name: granulosa cell layer namespace: zebrafish_anatomy synonym: "granulosa cell layers" EXACT PLURAL [] xref: TAO:0001112 xref: ZFIN:ZDB-ANAT-050228-26 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001110 ! ovarian follicle relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001113 name: thecal cell layer namespace: zebrafish_anatomy synonym: "thecal cell layers" EXACT PLURAL [] xref: TAO:0001113 xref: ZFIN:ZDB-ANAT-050228-27 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001110 ! ovarian follicle relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001114 name: head namespace: zebrafish_anatomy def: "Organism subdivision which is the part of the body which consists of the cranial and pharyngeal regions." [ZFIN:curator] xref: TAO:0001114 xref: ZFIN:ZDB-ANAT-050228-28 is_a: ZFA:0001308 ! organism subdivision relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0001115 name: trunk namespace: zebrafish_anatomy def: "Organism subdivision which is the part of the body posterior to the head and anterior to the post-vent region." [ZFIN:curator] xref: TAO:0001115 xref: ZFIN:ZDB-ANAT-050228-29 is_a: ZFA:0001308 ! organism subdivision relationship: develops_from ZFA:0000077 ! tail bud relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0001116 name: presumptive structure namespace: zebrafish_anatomy synonym: "presumptive structures" EXACT PLURAL [] xref: TAO:0001116 xref: ZFIN:ZDB-ANAT-050228-3 is_a: ZFA:0001105 ! embryonic structure relationship: end ZFS:0000032 ! Pharyngula:High-pec relationship: start ZFS:0000014 ! Blastula:Sphere [Term] id: ZFA:0001117 name: post-vent region namespace: zebrafish_anatomy def: "Organism subdivision which is the part of the body posterior to the vent which includes the anal and caudal fins." [ZFIN:curator] synonym: "tail" RELATED [] xref: TAO:0001117 xref: ZFIN:ZDB-ANAT-050228-30 is_a: ZFA:0001308 ! organism subdivision relationship: develops_from ZFA:0000077 ! tail bud relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0001118 name: urogenital papilla namespace: zebrafish_anatomy def: "A protuberance in front of the gential pore and behind the vent. Mature females have a well developed urogenital papillae whilst in mature males it is poorly developed." [ZFIN:ZDB-PUB-040526-4] synonym: "anal papilla" EXACT [] synonym: "anal papillae" EXACT [] synonym: "genital papilla" EXACT [] synonym: "UGP" EXACT [] synonym: "urogenital papillae" EXACT PLURAL [] xref: TAO:0001118 xref: ZFIN:ZDB-ANAT-050228-31 is_a: ZFA:0000292 ! surface structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000632 ! reproductive system relationship: start ZFS:0000038 ! Larval:Day 6 [Term] id: ZFA:0001119 name: dermis namespace: zebrafish_anatomy def: "A collagenous layer of the skin subjacent to the epidermis and covering the hypodermis. It contains various types of cells (e.g. fibroblasts, pigment cells, nerve, blood vessels and scales." [ZFIN:ZDB-PUB-040726-12] xref: TAO:0001119 xref: ZFIN:ZDB-ANAT-050228-32 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0000255 ! paraxial mesoderm relationship: develops_from ZFA:0000787 ! mesenchyme derived from head neural crest relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000368 ! integument relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001120 name: neuroectoderm namespace: zebrafish_anatomy synonym: "neural ectoderm" EXACT [] synonym: "neurectoderm" EXACT [] xref: TAO:0001120 xref: ZFIN:ZDB-ANAT-050228-33 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000038 ! Larval:Day 6 relationship: part_of ZFA:0000016 ! ectoderm relationship: start ZFS:0000020 ! Gastrula:75%-epiboly [Term] id: ZFA:0001121 name: presumptive shield namespace: zebrafish_anatomy xref: TAO:0001121 xref: ZFIN:ZDB-ANAT-050228-34 is_a: ZFA:0001116 ! presumptive structure relationship: end ZFS:0000018 ! Gastrula:Germ-ring relationship: start ZFS:0000016 ! Blastula:30%-epiboly [Term] id: ZFA:0001122 name: primary germ layer namespace: zebrafish_anatomy synonym: "embryonic germ layers" EXACT [] xref: TAO:0001122 xref: ZFIN:ZDB-ANAT-050228-35 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000038 ! Larval:Day 6 relationship: start ZFS:0000020 ! Gastrula:75%-epiboly [Term] id: ZFA:0001123 name: axial fin skeleton namespace: zebrafish_anatomy synonym: "unpaired fin skeleton" EXACT [] xref: TAO:0001123 xref: ZFIN:ZDB-ANAT-050228-36 is_a: ZFA:0000317 ! postcranial axial skeleton relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000032 ! Pharyngula:High-pec [Term] id: ZFA:0001124 name: dorsal fin skeleton namespace: zebrafish_anatomy xref: TAO:0001124 xref: ZFIN:ZDB-ANAT-050228-37 is_a: ZFA:0001123 ! axial fin skeleton relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001173 ! dorsal fin relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0001125 name: organizer inducing center namespace: zebrafish_anatomy def: "The dorsal marginal region of the YSL where maternal dorsal determinants localize. Participates in positioning the shield." [ZFIN:ZDB-PUB-991102-7] synonym: "Nieuwkoop center" EXACT [] xref: TAO:0001125 xref: ZFIN:ZDB-ANAT-050228-38 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000019 ! Gastrula:Shield relationship: part_of ZFA:0000088 ! YSL relationship: start ZFS:0000012 ! Blastula:High [Term] id: ZFA:0001126 name: noninvoluting endocytic marginal cell cluster namespace: zebrafish_anatomy def: "The NEM cell cluster lies in a superficial position of the dorsal blastoderm margin encompassing EVL cells and one or two layers of underlying deep cells. Unlike other marginal blastomeres, cells in this cluster do not participate in involution." [ZFIN:ZDB-PUB-970107-2] synonym: "NEM" EXACT [] synonym: "noninvoluting endocytic marginal cells" EXACT PLURAL [] xref: TAO:0001126 xref: ZFIN:ZDB-ANAT-050228-39 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000017 ! Gastrula:50%-epiboly relationship: part_of ZFA:0000038 ! margin relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001127 name: visual system namespace: zebrafish_anatomy xref: TAO:0001127 xref: ZFIN:ZDB-ANAT-050228-4 is_a: ZFA:0000282 ! sensory system relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0001128 name: pharyngeal pouch 1 namespace: zebrafish_anatomy synonym: "pharyngeal pouches 1" EXACT PLURAL [] xref: TAO:0001128 xref: ZFIN:ZDB-ANAT-050228-40 is_a: ZFA:0001106 ! pharyngeal pouch relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0001129 name: pharyngeal pouches 2-6 namespace: zebrafish_anatomy synonym: "pharyngeal pouches 2-6" EXACT PLURAL [] xref: TAO:0001129 xref: ZFIN:ZDB-ANAT-050228-41 is_a: ZFA:0001106 ! pharyngeal pouch relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0001130 name: pharyngeal pouch 2 namespace: zebrafish_anatomy synonym: "pharyngeal pouches 2" EXACT PLURAL [] xref: TAO:0001130 xref: ZFIN:ZDB-ANAT-050228-42 is_a: ZFA:0001129 ! pharyngeal pouches 2-6 relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0001131 name: pharyngeal pouch 3 namespace: zebrafish_anatomy synonym: "pharyngeal pouches 3" EXACT PLURAL [] xref: TAO:0001131 xref: ZFIN:ZDB-ANAT-050228-43 is_a: ZFA:0001129 ! pharyngeal pouches 2-6 relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0001132 name: pharyngeal pouch 6 namespace: zebrafish_anatomy synonym: "pharyngeal pouches 6" EXACT PLURAL [] xref: TAO:0001132 xref: ZFIN:ZDB-ANAT-050228-44 is_a: ZFA:0001129 ! pharyngeal pouches 2-6 relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0001133 name: pharyngeal pouch 5 namespace: zebrafish_anatomy synonym: "pharyngeal pouches 5" EXACT PLURAL [] xref: TAO:0001133 xref: ZFIN:ZDB-ANAT-050228-45 is_a: ZFA:0001129 ! pharyngeal pouches 2-6 relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0001134 name: pharyngeal pouch 4 namespace: zebrafish_anatomy synonym: "pharyngeal pouches 4" EXACT PLURAL [] xref: TAO:0001134 xref: ZFIN:ZDB-ANAT-050228-46 is_a: ZFA:0001129 ! pharyngeal pouches 2-6 relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0001135 name: neural tube namespace: zebrafish_anatomy synonym: "presumptive central nervous system" RELATED [] xref: TAO:0001135 xref: ZFIN:ZDB-ANAT-050228-47 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000133 ! neural rod relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001136 name: hypodermis namespace: zebrafish_anatomy def: "A layer separating the inner face of the dermis from the subjacent muscle cells. It is covered on both sides by a basement membrane. It contains pigment cells." [ZFIN:ZDB-PUB-040726-12] synonym: "subcutis" EXACT [] xref: TAO:0001136 xref: ZFIN:ZDB-ANAT-050228-48 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000368 ! integument relationship: start ZFS:0000040 ! Larval:Days 14-20 [Term] id: ZFA:0001137 name: ventral tooth row namespace: zebrafish_anatomy def: "Tooth row that is the ventralmost row of teeth on ceratobranchial 5 bone." [ZFIN:curator] synonym: "ventral tooth rows" EXACT PLURAL [] xref: TAO:0001137 xref: ZFIN:ZDB-ANAT-050228-49 is_a: ZFA:0001642 ! tooth row relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0001138 name: vestibuloauditory system namespace: zebrafish_anatomy xref: TAO:0001138 xref: ZFIN:ZDB-ANAT-050228-5 is_a: ZFA:0000282 ! sensory system relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0001139 name: mediodorsal tooth row namespace: zebrafish_anatomy def: "Tooth row that is the mediodorsal row of teeth on ceratobranchial 5 bone, located between the dorsal tooth row and ventral tooth row." [ZFIN:curator] synonym: "mediodorsal tooth rows" EXACT PLURAL [] xref: TAO:0001139 xref: ZFIN:ZDB-ANAT-050228-50 is_a: ZFA:0001642 ! tooth row relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001140 name: dorsal tooth row namespace: zebrafish_anatomy def: "Tooth row that is the dorsalmost row of teeth on ceratobranchial 5 bone." [ZFIN:curator] synonym: "dorsal tooth rows" EXACT PLURAL [] xref: TAO:0001140 xref: ZFIN:ZDB-ANAT-050228-51 is_a: ZFA:0001642 ! tooth row relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001141 name: tooth 1V namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is the anteriormost tooth in the ventral tooth row." [ZFIN:curator] xref: TAO:0001141 xref: ZFIN:ZDB-ANAT-050228-52 is_a: ZFA:0000694 ! ceratobranchial 5 tooth relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001137 ! ventral tooth row relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001142 name: tooth 5V namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is the posteriormost tooth in the ventral tooth row." [ZFIN:curator] xref: TAO:0001142 xref: ZFIN:ZDB-ANAT-050228-53 is_a: ZFA:0000694 ! ceratobranchial 5 tooth relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001137 ! ventral tooth row relationship: start ZFS:0000035 ! Larval:Protruding-mouth [Term] id: ZFA:0001143 name: tooth 4V namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is posterior to tooth 3V and anterior to tooth 5V in the ventral tooth row." [ZFIN:curator] xref: TAO:0001143 xref: ZFIN:ZDB-ANAT-050228-54 is_a: ZFA:0000694 ! ceratobranchial 5 tooth relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001137 ! ventral tooth row relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0001144 name: tooth 2V namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is posterior to tooth 1V and anterior to tooth 3V in the ventral tooth row." [ZFIN:curator] xref: TAO:0001144 xref: ZFIN:ZDB-ANAT-050228-55 is_a: ZFA:0000694 ! ceratobranchial 5 tooth relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001137 ! ventral tooth row relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001145 name: tooth 3V namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is posterior to tooth 2V and anterior to tooth 4V in the ventral tooth row." [ZFIN:curator] xref: TAO:0001145 xref: ZFIN:ZDB-ANAT-050228-56 is_a: ZFA:0000694 ! ceratobranchial 5 tooth relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001137 ! ventral tooth row relationship: start ZFS:0000035 ! Larval:Protruding-mouth [Term] id: ZFA:0001146 name: tooth 1MD namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is the anteriormost tooth in the mediodorsal tooth row." [ZFIN:curator] xref: TAO:0001146 xref: ZFIN:ZDB-ANAT-050228-57 is_a: ZFA:0000694 ! ceratobranchial 5 tooth relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001139 ! mediodorsal tooth row relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001147 name: tooth 2MD namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is posterior to tooth 1MD and anterior to tooth 3MD in the mediodorsal tooth row." [ZFIN:curator] xref: TAO:0001147 xref: ZFIN:ZDB-ANAT-050228-58 is_a: ZFA:0000694 ! ceratobranchial 5 tooth relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001139 ! mediodorsal tooth row relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001148 name: tooth 1D namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is the anteriormost tooth in the dorsal tooth row." [ZFIN:curator] xref: TAO:0001148 xref: ZFIN:ZDB-ANAT-050228-59 is_a: ZFA:0000694 ! ceratobranchial 5 tooth relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001140 ! dorsal tooth row relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001149 name: olfactory system namespace: zebrafish_anatomy xref: TAO:0001149 xref: ZFIN:ZDB-ANAT-050228-6 is_a: ZFA:0000282 ! sensory system relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001150 name: tooth 2D namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is the posteriormost tooth in the dorsal tooth row." [ZFIN:curator] xref: TAO:0001150 xref: ZFIN:ZDB-ANAT-050228-60 is_a: ZFA:0000694 ! ceratobranchial 5 tooth relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001140 ! dorsal tooth row relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001151 name: tooth 4MD namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is the posteriormost tooth in the mediodorsal tooth row." [ZFIN:curator] xref: TAO:0001151 xref: ZFIN:ZDB-ANAT-050228-61 is_a: ZFA:0000694 ! ceratobranchial 5 tooth relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001139 ! mediodorsal tooth row relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001152 name: tooth 3MD namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is posterior to tooth 2MD and anterior to tooth 4MD in the mediodorsal tooth row." [ZFIN:curator] xref: TAO:0001152 xref: ZFIN:ZDB-ANAT-050228-62 is_a: ZFA:0000694 ! ceratobranchial 5 tooth relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001139 ! mediodorsal tooth row relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001153 name: tooth placode namespace: zebrafish_anatomy def: "Placode that develops into a tooth. The placode is a thickening of the pharyngeal epithelium." [ZFIN:curator] synonym: "dental primordium" EXACT [] synonym: "tooth germ" EXACT [] xref: TAO:0001153 xref: ZFIN:ZDB-ANAT-050228-63 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0001174 ! pharyngeal epithelium relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0001154 name: anal fin musculature namespace: zebrafish_anatomy xref: TAO:0001154 xref: ZFIN:ZDB-ANAT-050228-64 is_a: ZFA:0000207 ! fin musculature relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001162 ! anal fin relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001155 name: enteric nervous system namespace: zebrafish_anatomy xref: TAO:0001155 xref: ZFIN:ZDB-ANAT-050228-65 is_a: ZFA:0001574 ! autonomic nervous system relationship: develops_from ZFA:0001334 ! presumptive enteric nervous system relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000112 ! gut relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0001156 name: posterior lateral line placode namespace: zebrafish_anatomy synonym: "posterior lateral line placodes" EXACT PLURAL [] xref: TAO:0001156 xref: ZFIN:ZDB-ANAT-050228-66 is_a: ZFA:0001310 ! dorsolateral placode relationship: end ZFS:0000028 ! Segmentation:26+ somites relationship: part_of ZFA:0001471 ! posterior lateral line system relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001157 name: posterior lateral line primordium namespace: zebrafish_anatomy def: "A migrating group of cells originating from the posterior lateral line placode. The primordium deposits seven to nine neuromasts and interneuromasts between them during its posterior migration to the tail." [ZFIN:ZDB-PUB-010705-16] synonym: "posterior lateral line primordia" EXACT PLURAL [] xref: TAO:0001157 xref: ZFIN:ZDB-ANAT-050228-67 is_a: ZFA:0000228 ! lateral line primordium relationship: develops_from ZFA:0001156 ! posterior lateral line placode relationship: end ZFS:0000036 ! Larval:Day 4 relationship: part_of ZFA:0001471 ! posterior lateral line system relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0001158 name: endocrine system namespace: zebrafish_anatomy xref: TAO:0001158 xref: ZFIN:ZDB-ANAT-050228-7 is_a: ZFA:0001439 ! anatomical system relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001159 name: immune system namespace: zebrafish_anatomy xref: TAO:0001159 xref: ZFIN:ZDB-ANAT-050228-8 is_a: ZFA:0001439 ! anatomical system relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001160 name: adult namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050228-9 is_obsolete: true [Term] id: ZFA:0001161 name: pectoral fin namespace: zebrafish_anatomy synonym: "pectoral fins" EXACT PLURAL [] xref: TAO:0001161 xref: ZFIN:ZDB-ANAT-050304-1 is_a: ZFA:0000108 ! fin relationship: develops_from ZFA:0000141 ! pectoral fin bud relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0001162 name: anal fin namespace: zebrafish_anatomy xref: TAO:0001162 xref: ZFIN:ZDB-ANAT-050420-1 is_a: ZFA:0000108 ! fin relationship: develops_from ZFA:0001069 ! ventral fin fold relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001117 ! post-vent region relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001163 name: supraneural 7 namespace: zebrafish_anatomy xref: TAO:0001163 xref: ZFIN:ZDB-ANAT-050420-10 is_a: ZFA:0001397 ! post-Weberian supraneural relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000040 ! Larval:Days 14-20 [Term] id: ZFA:0001164 name: supraneural 6 namespace: zebrafish_anatomy synonym: "sn6" EXACT [] xref: TAO:0001164 xref: ZFIN:ZDB-ANAT-050420-11 is_a: ZFA:0001397 ! post-Weberian supraneural relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000040 ! Larval:Days 14-20 [Term] id: ZFA:0001165 name: supraneural 5 namespace: zebrafish_anatomy synonym: "sn5" EXACT [] xref: TAO:0001165 xref: ZFIN:ZDB-ANAT-050420-12 is_a: ZFA:0001397 ! post-Weberian supraneural relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000040 ! Larval:Days 14-20 [Term] id: ZFA:0001166 name: supraneural 9 namespace: zebrafish_anatomy xref: TAO:0001166 xref: ZFIN:ZDB-ANAT-050420-13 is_a: ZFA:0001397 ! post-Weberian supraneural relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000040 ! Larval:Days 14-20 [Term] id: ZFA:0001167 name: vertebra 1 namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to the neurocranium." [TAO:curator] synonym: "cervical vertebra 1" EXACT [] xref: TAO:0001167 xref: ZFIN:ZDB-ANAT-050420-14 is_a: ZFA:0001190 ! Weberian vertebra relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0001168 name: vertebra 2 namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 1." [TAO:curator] synonym: "cervical vertebra 2" EXACT [] xref: TAO:0001168 xref: ZFIN:ZDB-ANAT-050420-15 is_a: ZFA:0001190 ! Weberian vertebra relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0001169 name: vertebra 3 namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 2." [TAO:curator] xref: TAO:0001169 xref: ZFIN:ZDB-ANAT-050420-16 is_a: ZFA:0001190 ! Weberian vertebra relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0001170 name: vertebra 4 namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 3." [TAO:curator] xref: TAO:0001170 xref: ZFIN:ZDB-ANAT-050420-17 is_a: ZFA:0001190 ! Weberian vertebra relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0001171 name: os suspensorium namespace: zebrafish_anatomy def: "Separate ossification from the parapophysis of the fourth vertebra; develops ventrally to curve around the anterior head of the swim bladder. Often termed a fifth Weberian ossicle." [ZFIN:ZDB-PUB-031103-13] xref: TAO:0001171 xref: ZFIN:ZDB-ANAT-050420-18 is_a: ZFA:0001591 ! endochondral bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000461 ! Weberian ossicle relationship: part_of ZFA:0001170 ! vertebra 4 relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0001172 name: roofing cartilage namespace: zebrafish_anatomy def: "Cartilaginous larval structure dorsal to the four anterior-most vertebrae, which forms the connection between neural arches and supraneurals in the Weberian apparatus." [ZFIN:ZDB-PUB-031103-13] xref: TAO:0001172 xref: ZFIN:ZDB-ANAT-050420-19 is_a: ZFA:0001457 ! postcranial axial cartilage relationship: end ZFS:0000041 ! Larval:Days 21-29 relationship: part_of ZFA:0001191 ! supraneural 2 relationship: part_of ZFA:0001192 ! supraneural 3 relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0001173 name: dorsal fin namespace: zebrafish_anatomy xref: TAO:0001173 xref: ZFIN:ZDB-ANAT-050420-2 is_a: ZFA:0000108 ! fin relationship: develops_from ZFA:0000102 ! dorsal fin fold relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001174 name: pharyngeal epithelium namespace: zebrafish_anatomy def: "Epithelium lining the pharynx consisting largely of simple columnar epithelium with a short segment (1mm) of stratified squamous epithelium on the ventral side." [ZFIN:ZDB-PUB-070426-1] xref: TAO:0001174 xref: ZFIN:ZDB-ANAT-050420-20 is_a: ZFA:0001495 ! unilaminar epithelium relationship: develops_from ZFA:0001104 ! pharyngeal endoderm relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000056 ! pharynx relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0001175 name: blastodisc namespace: zebrafish_anatomy xref: TAO:0001175 xref: ZFIN:ZDB-ANAT-050420-21 is_a: ZFA:0001105 ! embryonic structure relationship: end ZFS:0000015 ! Blastula:Dome relationship: start ZFS:0000001 ! Zygote:1-cell [Term] id: ZFA:0001176 name: blastoderm namespace: zebrafish_anatomy xref: TAO:0001176 xref: ZFIN:ZDB-ANAT-050420-22 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0001175 ! blastodisc relationship: end ZFS:0000022 ! Gastrula:Bud relationship: start ZFS:0000016 ! Blastula:30%-epiboly [Term] id: ZFA:0001177 name: roof plate spinal cord region namespace: zebrafish_anatomy xref: TAO:0001177 xref: ZFIN:ZDB-ANAT-050420-23 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0000075 ! spinal cord relationship: part_of ZFA:0007058 ! roof plate relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001178 name: non neural ectoderm namespace: zebrafish_anatomy synonym: "ventral ectoderm" EXACT [] xref: TAO:0001178 xref: ZFIN:ZDB-ANAT-050420-24 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000027 ! Segmentation:20-25 somites relationship: part_of ZFA:0000016 ! ectoderm relationship: start ZFS:0000020 ! Gastrula:75%-epiboly [Term] id: ZFA:0001179 name: epidermal superficial stratum namespace: zebrafish_anatomy xref: TAO:0001179 xref: ZFIN:ZDB-ANAT-050420-25 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0001185 ! periderm relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000105 ! epidermis relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001180 name: epidermal basal stratum namespace: zebrafish_anatomy xref: TAO:0001180 xref: ZFIN:ZDB-ANAT-050420-26 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000105 ! epidermis relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001181 name: epidermal intermediate stratum namespace: zebrafish_anatomy xref: TAO:0001181 xref: ZFIN:ZDB-ANAT-050420-27 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000105 ! epidermis relationship: start ZFS:0000041 ! Larval:Days 21-29 [Term] id: ZFA:0001182 name: dermal deep region namespace: zebrafish_anatomy def: "Portion of the dermis characterized by a well-arranged, plywood-like, collagenous network." [ZFIN:ZDB-PUB-040726-12] synonym: "stratum compactum" EXACT [] xref: TAO:0001182 xref: ZFIN:ZDB-ANAT-050420-28 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0001186 ! collagenous dermal stroma relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001119 ! dermis relationship: start ZFS:0000041 ! Larval:Days 21-29 [Term] id: ZFA:0001183 name: dermal superficial region namespace: zebrafish_anatomy synonym: "stratum laxum" EXACT [] xref: TAO:0001183 xref: ZFIN:ZDB-ANAT-050420-29 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001119 ! dermis relationship: start ZFS:0000042 ! Juvenile:Days 30-44 [Term] id: ZFA:0001184 name: pelvic fin namespace: zebrafish_anatomy synonym: "pelvic fins" EXACT PLURAL [] xref: TAO:0001184 xref: ZFIN:ZDB-ANAT-050420-3 is_a: ZFA:0000108 ! fin relationship: develops_from ZFA:0001384 ! pelvic fin bud relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0001185 name: periderm namespace: zebrafish_anatomy def: "The outermost epidermal layer covering the fish at embryonic stages; derived from the EVL and thought to eventually be replaced by the superficial stratum of the epidermis. Sometimes used synonymously with EVL." [ZFIN:ZDB-PUB-040726-12] synonym: "EVL" RELATED [] xref: TAO:0001185 xref: ZFIN:ZDB-ANAT-050420-30 is_a: ZFA:0001486 ! epithelium relationship: develops_from ZFA:0000086 ! EVL relationship: end ZFS:0000028 ! Segmentation:26+ somites relationship: part_of ZFA:0000016 ! ectoderm relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0001186 name: collagenous dermal stroma namespace: zebrafish_anatomy def: "Acellular anatomical structure that is a layer of collagen fibrils in the immature integument in a subepidermal space. At first, the fibrils are all oriented in the same direction, later they form the complex plywood-like structure that is characteristic of the dermal deep region." [ZFIN:ZDB-PUB-040726-12] synonym: "primary dermal stroma" EXACT [] xref: TAO:0001186 xref: ZFIN:ZDB-ANAT-050420-31 is_a: ZFA:0000382 ! acellular anatomical structure relationship: end ZFS:0000041 ! Larval:Days 21-29 relationship: part_of ZFA:0001119 ! dermis relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001187 name: presumptive midbrain hindbrain boundary namespace: zebrafish_anatomy synonym: "presumptive midbrain-hindbrain boundary" EXACT [] xref: TAO:0001187 xref: ZFIN:ZDB-ANAT-050420-32 is_a: ZFA:0001105 ! embryonic structure relationship: end ZFS:0000020 ! Gastrula:75%-epiboly relationship: part_of ZFA:0000146 ! presumptive brain relationship: start ZFS:0000020 ! Gastrula:75%-epiboly [Term] id: ZFA:0001188 name: Weberian apparatus namespace: zebrafish_anatomy def: "The Weberian apparatus consists of the modified anteriormost four vertebrae and associated structures of otophysans which transduce sound or pressure waves from the tunica externa of the swimbladder to the inner ear (Alexander, 1962)." [ZFIN:curator] xref: TAO:0001188 xref: ZFIN:ZDB-ANAT-050420-4 is_a: ZFA:0001478 ! anatomical cluster relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001559 ! vertebral column relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0001189 name: vertebra namespace: zebrafish_anatomy def: "All serially repeated ossified, cartilaginous, and ligamentous elements around the notochord (Schultze and Arratia, 1988). Adult zebrafish usually 32 vertebrae but may have as few as 30 to as many as 33 vertebrae." [ZFIN:curator, ZFIN:ZDB-PUB-020807-1] synonym: "vertebrae" EXACT PLURAL [] xref: TAO:0001189 xref: ZFIN:ZDB-ANAT-050420-5 is_a: ZFA:0001591 ! endochondral bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001559 ! vertebral column relationship: start ZFS:0000035 ! Larval:Protruding-mouth [Term] id: ZFA:0001190 name: Weberian vertebra namespace: zebrafish_anatomy def: "The first four vertebrae, which are part of the Weberian apparatus." [ZFIN:curator] synonym: "Weberian vertebrae" EXACT PLURAL [] xref: TAO:0001190 xref: ZFIN:ZDB-ANAT-050420-6 is_a: ZFA:0000263 ! precaudal vertebra relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001188 ! Weberian apparatus relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0001191 name: supraneural 2 namespace: zebrafish_anatomy def: "Supraneural 2 is an ovoid cartilage or cartilage replacement bone located above centrum 2. It forms an immovable joint with supraneural 3 and contributes to the neural complex roofing the neural canal." [ZFIN:curator] synonym: "small supraneural" EXACT [] synonym: "sn2" EXACT [] xref: TAO:0001191 xref: ZFIN:ZDB-ANAT-050420-7 is_a: ZFA:0000442 ! supraneural relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001363 ! neural complex relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0001192 name: supraneural 3 namespace: zebrafish_anatomy def: "Supraneural 3 is an elongated cartilage or cartilage replacement bone above vertebrae 3 and 4, developmentally fusing with NA 3 and 4. A crest or blade of membrane bone forms from its dorsal surface." [ZFIN:curator] synonym: "large supraneural" EXACT [] synonym: "sn3" EXACT [] xref: TAO:0001192 xref: ZFIN:ZDB-ANAT-050420-8 is_a: ZFA:0000442 ! supraneural relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001363 ! neural complex relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0001193 name: supraneural 8 namespace: zebrafish_anatomy xref: TAO:0001193 xref: ZFIN:ZDB-ANAT-050420-9 is_a: ZFA:0001397 ! post-Weberian supraneural relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000040 ! Larval:Days 14-20 [Term] id: ZFA:0001194 name: cranial neural crest namespace: zebrafish_anatomy def: "Neural crest that is part of the head." [ZFIN:curator] xref: TAO:0001194 xref: ZFIN:ZDB-ANAT-050711-1 is_a: ZFA:0000045 ! neural crest relationship: end ZFS:0000028 ! Segmentation:26+ somites relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0001195 name: pars anterior namespace: zebrafish_anatomy synonym: "pars distalis" EXACT [] xref: TAO:0001195 xref: ZFIN:ZDB-ANAT-050711-10 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001282 ! adenohypophysis relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001196 name: pars tuberalis namespace: zebrafish_anatomy xref: TAO:0001196 xref: ZFIN:ZDB-ANAT-050711-11 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001282 ! adenohypophysis relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001197 name: pars intermedia namespace: zebrafish_anatomy xref: TAO:0001197 xref: ZFIN:ZDB-ANAT-050711-12 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001282 ! adenohypophysis relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001198 name: adenohypophyseal placode namespace: zebrafish_anatomy synonym: "pituitary placode" EXACT [] xref: TAO:0001198 xref: ZFIN:ZDB-ANAT-050711-13 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0001178 ! non neural ectoderm relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001199 name: infundibulum namespace: zebrafish_anatomy def: "Brain structure which is a short stalk connecting the neurohypophysis with the brain. Axons of secretory cells in the floor of the diencephalon traverse the infundibulum and terminate in the neurohypophysis." [ZFIN:curator] synonym: "hypophysial stalk" EXACT [] synonym: "infundibulum of hypothalamus" EXACT [] synonym: "pituitary stalk" EXACT [] xref: TAO:0001199 xref: ZFIN:ZDB-ANAT-050711-14 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001271 ! neurohypophysis relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001200 name: corpuscles of Stannius namespace: zebrafish_anatomy def: "Islands of eosinic cells found on the lateroventral surface of the kidney. Function is thought to be that of the parathyroid gland in other vertebrates, which are lacking in fishes. These cells secrete hypocalcin (teleocalcin) to regulate calcium metabolism." [ZFIN:curator] xref: TAO:0001200 xref: ZFIN:ZDB-ANAT-050711-15 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000529 ! kidney relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0001201 name: ventral lateral mesoderm namespace: zebrafish_anatomy xref: TAO:0001201 xref: ZFIN:ZDB-ANAT-050711-16 is_a: ZFA:0000041 ! mesoderm relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0000083 ! ventral mesoderm relationship: start ZFS:0000021 ! Gastrula:90%-epiboly [Term] id: ZFA:0001202 name: optic cup namespace: zebrafish_anatomy def: "Multi-tissue structure that is comprised of neural and non-neural epithelial layers which will form the retina and retinal pigmented epithelium of the mature eye." [ZFIN:curator] synonym: "eye cup" EXACT [] xref: TAO:0001202 xref: ZFIN:ZDB-ANAT-050711-17 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0000050 ! optic vesicle relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0001678 ! immature eye relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0001203 name: ciliary zone namespace: zebrafish_anatomy def: "Multi-tissue structure that attach the zonules, that suspend the lens, to the eye. The ciliary zone secretes aqueous humor. Unlike mammals zebrafish the ciliary zone dose not contain processes or a circumferential band of muscle." [ZFIN:ZDB-PUB-050701-15] comment: may need to obsolete this term. ZDB-PUB-050701-15\n\nthe ciliary "body" does not contain processes or a\ncircumferential band of muscle. For this reason, we refer\nto the region adjacent and posterior to the iris as the ciliary\nzone, and not the ciliary body. The ciliary zone, however,\nis expanded and has a morphology consistent with\ncontraction in a small area of the ventral-most region synonym: "ciliary bodies" RELATED PLURAL [] synonym: "ciliary body" RELATED [] synonym: "ciliary epithelial zone" EXACT [] xref: TAO:0001203 xref: ZFIN:ZDB-ANAT-050711-18 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000107 ! eye relationship: start ZFS:0000042 ! Juvenile:Days 30-44 [Term] id: ZFA:0001204 name: axial mesoderm namespace: zebrafish_anatomy xref: TAO:0001204 xref: ZFIN:ZDB-ANAT-050711-19 is_a: ZFA:0000041 ! mesoderm relationship: develops_from ZFA:0001378 ! axial hypoblast relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: start ZFS:0000020 ! Gastrula:75%-epiboly [Term] id: ZFA:0001205 name: Meckel's cartilage namespace: zebrafish_anatomy def: "Meckel's cartilage is the bilaterally paired, rod-like, cartilaginous ventral component of the lower jaw, or ventral mandibular arch. It is typically resorbed in adults." [ZFIN:curator] synonym: "ventral mandibular cartilage" EXACT [] xref: TAO:0001205 xref: ZFIN:ZDB-ANAT-050711-2 is_a: ZFA:0001460 ! pharyngeal arch cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001273 ! ventral mandibular arch relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0001206 name: intermediate mesoderm namespace: zebrafish_anatomy synonym: "IM" EXACT [] xref: TAO:0001206 xref: ZFIN:ZDB-ANAT-050711-20 is_a: ZFA:0000041 ! mesoderm relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0001207 name: presumptive rhombomere 1 namespace: zebrafish_anatomy xref: TAO:0001207 xref: ZFIN:ZDB-ANAT-050711-21 is_a: ZFA:0001105 ! embryonic structure relationship: end ZFS:0000024 ! Segmentation:5-9 somites relationship: part_of ZFA:0007029 ! hindbrain neural keel relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0001208 name: presumptive rhombomere 2 namespace: zebrafish_anatomy xref: TAO:0001208 xref: ZFIN:ZDB-ANAT-050711-22 is_a: ZFA:0001105 ! embryonic structure relationship: end ZFS:0000024 ! Segmentation:5-9 somites relationship: part_of ZFA:0007029 ! hindbrain neural keel relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0001209 name: presumptive rhombomere 7 namespace: zebrafish_anatomy xref: TAO:0001209 xref: ZFIN:ZDB-ANAT-050711-23 is_a: ZFA:0001105 ! embryonic structure relationship: end ZFS:0000024 ! Segmentation:5-9 somites relationship: part_of ZFA:0007029 ! hindbrain neural keel relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0001210 name: presumptive rhombomere 6 namespace: zebrafish_anatomy xref: TAO:0001210 xref: ZFIN:ZDB-ANAT-050711-24 is_a: ZFA:0001105 ! embryonic structure relationship: end ZFS:0000024 ! Segmentation:5-9 somites relationship: part_of ZFA:0007029 ! hindbrain neural keel relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0001211 name: presumptive rhombomere 5 namespace: zebrafish_anatomy xref: TAO:0001211 xref: ZFIN:ZDB-ANAT-050711-25 is_a: ZFA:0001105 ! embryonic structure relationship: end ZFS:0000024 ! Segmentation:5-9 somites relationship: part_of ZFA:0007029 ! hindbrain neural keel relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0001212 name: presumptive rhombomere 4 namespace: zebrafish_anatomy xref: TAO:0001212 xref: ZFIN:ZDB-ANAT-050711-26 is_a: ZFA:0001105 ! embryonic structure relationship: end ZFS:0000024 ! Segmentation:5-9 somites relationship: part_of ZFA:0007029 ! hindbrain neural keel relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0001213 name: presumptive rhombomere 3 namespace: zebrafish_anatomy xref: TAO:0001213 xref: ZFIN:ZDB-ANAT-050711-27 is_a: ZFA:0001105 ! embryonic structure relationship: end ZFS:0000024 ! Segmentation:5-9 somites relationship: part_of ZFA:0007029 ! hindbrain neural keel relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0001214 name: presumptive rhombomere 8 namespace: zebrafish_anatomy xref: TAO:0001214 xref: ZFIN:ZDB-ANAT-050711-28 is_a: ZFA:0001105 ! embryonic structure relationship: end ZFS:0000024 ! Segmentation:5-9 somites relationship: part_of ZFA:0007029 ! hindbrain neural keel relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0001215 name: thalamus namespace: zebrafish_anatomy def: "Multi-tissue structure that is paired, and is situated one on either side of and forming part of the lateral wall of the third ventricle." [ZFIN:curator] synonym: "thalami" EXACT PLURAL [] xref: TAO:0001215 xref: ZFIN:ZDB-ANAT-050711-29 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000101 ! diencephalon relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001216 name: splanchnocranium namespace: zebrafish_anatomy def: "Anatomical cluster that is the regional skeletal system of the jaws, hyoid and branchial arches." [ZFIN:curator] synonym: "pharyngeal arch skeleton" EXACT [] synonym: "pharyngeal skeleton" EXACT [] xref: TAO:0001216 xref: ZFIN:ZDB-ANAT-050711-3 is_a: ZFA:0001478 ! anatomical cluster relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000737 ! cranium relationship: part_of ZFA:0001306 ! pharyngeal arch relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001217 name: presumptive hypochord namespace: zebrafish_anatomy xref: TAO:0001217 xref: ZFIN:ZDB-ANAT-050711-30 is_a: ZFA:0001116 ! presumptive structure relationship: end ZFS:0000024 ! Segmentation:5-9 somites relationship: start ZFS:0000020 ! Gastrula:75%-epiboly [Term] id: ZFA:0001218 name: presumptive floor plate namespace: zebrafish_anatomy def: "Part of the neural plate fated to become floor plate." [ZFIN:curator] xref: TAO:0001218 xref: ZFIN:ZDB-ANAT-050711-31 is_a: ZFA:0001105 ! embryonic structure relationship: end ZFS:0000023 ! Segmentation:1-4 somites relationship: part_of ZFA:0000132 ! neural plate relationship: start ZFS:0000020 ! Gastrula:75%-epiboly [Term] id: ZFA:0001220 name: copula namespace: zebrafish_anatomy def: "Pharyngeal arch cartilage that is ventral, median, and associated with more than one pharyngeal arch in the pharyngeal arch 3-7 skeleton. The copulae are the precursors of the basibranchials." [ZFIN:curator] synonym: "copulae" EXACT PLURAL [] xref: TAO:0001220 xref: ZFIN:ZDB-ANAT-050711-33 is_a: ZFA:0001460 ! pharyngeal arch cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton relationship: start ZFS:0000032 ! Pharyngula:High-pec [Term] id: ZFA:0001221 name: copula 1 namespace: zebrafish_anatomy def: "Copula that is ventral, median, and associated with pharyngeal arches 3-5. A long slender cartilage extending along the midline from the posterior tip of the basihyal to between the third hypobranchials." [ZFIN:curator] xref: TAO:0001221 xref: ZFIN:ZDB-ANAT-050711-34 is_a: ZFA:0001220 ! copula relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000032 ! Pharyngula:High-pec [Term] id: ZFA:0001222 name: copula 2 namespace: zebrafish_anatomy def: "Copula that is ventral, median, and associated with pharyngeal arches 6-7. A cartilage extending from the posterior tip of copula 1 to the anterior tips of the fifth ceratobranchials." [ZFIN:curator] xref: TAO:0001222 xref: ZFIN:ZDB-ANAT-050711-35 is_a: ZFA:0001220 ! copula relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0001223 name: basibranchial 1 namespace: zebrafish_anatomy def: "Basibranchial 1 ossifies posterior to the basihyal and anterior to the first hypobranchials in copula 1 (7.6 mm)." [ZFIN:curator] xref: TAO:0001223 xref: ZFIN:ZDB-ANAT-050711-36 is_a: ZFA:0000170 ! basibranchial relationship: develops_from ZFA:0001221 ! copula 1 relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000040 ! Larval:Days 14-20 [Term] id: ZFA:0001224 name: basibranchial 2 namespace: zebrafish_anatomy def: "Basibranchial 2 ossifies in copula 1 posterior to the first hypobranchials and anterior to the second hypobranchials (6.8 mm). It is the first of the three basibranchials to ossify." [ZFIN:curator] xref: TAO:0001224 xref: ZFIN:ZDB-ANAT-050711-37 is_a: ZFA:0000170 ! basibranchial relationship: develops_from ZFA:0001221 ! copula 1 relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000040 ! Larval:Days 14-20 [Term] id: ZFA:0001225 name: basibranchial 3 namespace: zebrafish_anatomy def: "Basibranchial 3 ossifies in copula 1 posterior to the second hypobranchials, anterior to the third hypobranchials (7.6 mm) and associated with pharyngeal arch 5. Cartilage pads, remnants of copula 1, remain between adjacent basibranchials in the adult." [ZFIN:curator] xref: TAO:0001225 xref: ZFIN:ZDB-ANAT-050711-38 is_a: ZFA:0000170 ! basibranchial relationship: develops_from ZFA:0001221 ! copula 1 relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000040 ! Larval:Days 14-20 [Term] id: ZFA:0001226 name: basibranchial 4 namespace: zebrafish_anatomy def: "Occasionally, a fourth basibranchial ossifies in the narrow copula 2 cartilage, which lies posterior to the third basibranchial and anterior to the anteromedial articulation of the fifth ceratobranchials." [ZFIN:curator] xref: TAO:0001226 xref: ZFIN:ZDB-ANAT-050711-39 is_a: ZFA:0000170 ! basibranchial relationship: develops_from ZFA:0001222 ! copula 2 relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000041 ! Larval:Days 21-29 [Term] id: ZFA:0001227 name: mandibular arch skeleton namespace: zebrafish_anatomy def: "Skeletal and cartilaginous elements of the first pharyngeal arch." [ZFIN:curator] synonym: "jaw" EXACT [] synonym: "jaw cartilage" EXACT [] synonym: "jaws" EXACT PLURAL [] synonym: "oral jaw skeleton" EXACT [] synonym: "pharyngeal arch 1 skeleton" EXACT [] xref: TAO:0001227 xref: ZFIN:ZDB-ANAT-050711-4 is_a: ZFA:0001216 ! splanchnocranium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001612 ! pharyngeal arch 1 relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001228 name: pharyngeal arch 3 skeleton namespace: zebrafish_anatomy xref: TAO:0001228 xref: ZFIN:ZDB-ANAT-050711-40 is_a: ZFA:0000095 ! pharyngeal arch 3-7 skeleton relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001606 ! pharyngeal arch 3 relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001229 name: pharyngeal arch 7 skeleton namespace: zebrafish_anatomy xref: TAO:0001229 xref: ZFIN:ZDB-ANAT-050711-41 is_a: ZFA:0000095 ! pharyngeal arch 3-7 skeleton relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001610 ! pharyngeal arch 7 relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001230 name: pharyngeal arch 6 skeleton namespace: zebrafish_anatomy xref: TAO:0001230 xref: ZFIN:ZDB-ANAT-050711-42 is_a: ZFA:0000095 ! pharyngeal arch 3-7 skeleton relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001609 ! pharyngeal arch 6 relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001231 name: pharyngeal arch 4 skeleton namespace: zebrafish_anatomy xref: TAO:0001231 xref: ZFIN:ZDB-ANAT-050711-43 is_a: ZFA:0000095 ! pharyngeal arch 3-7 skeleton relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001607 ! pharyngeal arch 4 relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001232 name: pharyngeal arch 5 skeleton namespace: zebrafish_anatomy xref: TAO:0001232 xref: ZFIN:ZDB-ANAT-050711-44 is_a: ZFA:0000095 ! pharyngeal arch 3-7 skeleton relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001608 ! pharyngeal arch 5 relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001233 name: hypobranchial 1 bone namespace: zebrafish_anatomy def: "Hypobranchial ossifications 1-3 develop in the small hypobranchial cartilages that lie between the medial tips of the ceratobranchials and copula 1. The first and second hypobranchials are small and irregular in shape; one or both ossifications are absent in some adults." [ZFIN:curator] synonym: "hypobranchial 1 bones" EXACT PLURAL [] xref: TAO:0001233 xref: ZFIN:ZDB-ANAT-050711-45 is_a: ZFA:0000363 ! hypobranchial bone relationship: develops_from ZFA:0001524 ! hypobranchial 1 cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001228 ! pharyngeal arch 3 skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001234 name: hypobranchial 4 bone namespace: zebrafish_anatomy def: "Tiny hypobranchial4 cartilages appear at anteromedial tips of ceratobranchial 4; these are not obviously present in mature specimens, due either to resorption or fusion to the cartilaginous anterior tip of ceratobranchial." [ZFIN:curator] synonym: "hypobranchial 4 bones" EXACT PLURAL [] xref: TAO:0001234 xref: ZFIN:ZDB-ANAT-050711-46 is_a: ZFA:0000363 ! hypobranchial bone relationship: develops_from ZFA:0001523 ! hypobranchial 4 cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001230 ! pharyngeal arch 6 skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001235 name: hypobranchial 3 bone namespace: zebrafish_anatomy def: "Hypobranchial ossifications 1-3 develop in the small hypobranchial cartilages that lie between the medial tips of the ceratobranchials and copula 1. The first and second hypobranchials are small and irregular in shape; one or both ossifications are absent in some adults." [ZFIN:curator] synonym: "hypobranchial 3 bones" EXACT PLURAL [] xref: TAO:0001235 xref: ZFIN:ZDB-ANAT-050711-47 is_a: ZFA:0000363 ! hypobranchial bone relationship: develops_from ZFA:0001526 ! hypobranchial 3 cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001232 ! pharyngeal arch 5 skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001236 name: hypobranchial 2 bone namespace: zebrafish_anatomy def: "Hypobranchial ossifications 1-3 develop in the small hypobranchial cartilages that lie between the medial tips of the ceratobranchials and copula 1. The first and second hypobranchials are small and irregular in shape; one or both ossifications are absent in some adults." [ZFIN:curator] synonym: "hypobranchial 2 bones" EXACT PLURAL [] xref: TAO:0001236 xref: ZFIN:ZDB-ANAT-050711-48 is_a: ZFA:0000363 ! hypobranchial bone relationship: develops_from ZFA:0001525 ! hypobranchial 2 cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001231 ! pharyngeal arch 4 skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001237 name: ceratobranchial 1 bone namespace: zebrafish_anatomy def: "Ceratobranchial bone that is bilaterally paired and articulates laterally with epibranchial 1 cartilage or bone and medially with the cartilage between the basibranchials. Gill rakers are present on the anterior and posterior margins." [ZFIN:curator] xref: TAO:0001237 xref: ZFIN:ZDB-ANAT-050711-49 is_a: ZFA:0000488 ! ceratobranchial bone relationship: develops_from ZFA:0001520 ! ceratobranchial 1 cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001228 ! pharyngeal arch 3 skeleton relationship: start ZFS:0000040 ! Larval:Days 14-20 [Term] id: ZFA:0001238 name: iris namespace: zebrafish_anatomy def: "Multi-tissue structure that consists of pigmented stroma and is connected to a sphincter muscle and a dilator muscle which open and close the pupil located in the center of the iris." [http:www.encyclopedia.thefreedictionary.com/Iris+(anatomy)] synonym: "irises" EXACT PLURAL [] xref: TAO:0001238 xref: ZFIN:ZDB-ANAT-050711-5 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000107 ! eye relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001239 name: ceratobranchial 5 bone namespace: zebrafish_anatomy def: "Ceratobranchial bone that is the most posterior, bilaterally paired ventral pharyngeal arch bone. Ceratobranchial 5 ossifies before ceratobranchials 1-4. In the adult, ceratobranchial 5 is heavily ossified and crescent-shaped with two to three rows of posteromedially directed teeth. The anteroventral tips of ceratobranchials 5 meet medially and are ligamentously joined." [ZFIN:curator] xref: TAO:0001239 xref: ZFIN:ZDB-ANAT-050711-50 is_a: ZFA:0000488 ! ceratobranchial bone relationship: develops_from ZFA:0001521 ! ceratobranchial 5 cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001229 ! pharyngeal arch 7 skeleton relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0001240 name: ceratobranchial 4 bone namespace: zebrafish_anatomy def: "Ceratobranchial bone that is bilaterally paired and articulates laterally with epibranchial 4 cartilage or bone and medially with copula 2. Gill rakers are present on the anterior and posterior margins." [ZFIN:curator] xref: TAO:0001240 xref: ZFIN:ZDB-ANAT-050711-51 is_a: ZFA:0000488 ! ceratobranchial bone relationship: develops_from ZFA:0001519 ! ceratobranchial 4 cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001230 ! pharyngeal arch 6 skeleton relationship: start ZFS:0000040 ! Larval:Days 14-20 [Term] id: ZFA:0001241 name: ceratobranchial 3 bone namespace: zebrafish_anatomy def: "Ceratobranchial bone that is bilaterally paired and articulates laterally with epibranchial 3 cartilage or bone and medially with the cartilage between the basibranchials. Gill rakers are present on the anterior and posterior margins." [ZFIN:curator] xref: TAO:0001241 xref: ZFIN:ZDB-ANAT-050711-52 is_a: ZFA:0000488 ! ceratobranchial bone relationship: develops_from ZFA:0001518 ! ceratobranchial 3 cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001232 ! pharyngeal arch 5 skeleton relationship: start ZFS:0000040 ! Larval:Days 14-20 [Term] id: ZFA:0001242 name: ceratobranchial 2 bone namespace: zebrafish_anatomy def: "Ceratobranchial bone that is bilaterally paired and articulates laterally with epibranchial 2 cartilage or bone and medially with the cartilage between the basibranchials. Gill rakers are present on the anterior and posterior margins." [ZFIN:curator] xref: TAO:0001242 xref: ZFIN:ZDB-ANAT-050711-53 is_a: ZFA:0000488 ! ceratobranchial bone relationship: develops_from ZFA:0001517 ! ceratobranchial 2 cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001231 ! pharyngeal arch 4 skeleton relationship: start ZFS:0000040 ! Larval:Days 14-20 [Term] id: ZFA:0001243 name: epibranchial 1 bone namespace: zebrafish_anatomy def: "Epibranchial bone that is bilaterally paired and articulates laterally with ceratobranchial 1 cartilage or bone. The narrowed medial end of epibranchial 1 articulates through cartilage with pharyngobranchial 1." [ZFIN:curator] xref: TAO:0001243 xref: ZFIN:ZDB-ANAT-050711-54 is_a: ZFA:0000658 ! epibranchial bone relationship: develops_from ZFA:0001528 ! epibranchial 1 cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001228 ! pharyngeal arch 3 skeleton relationship: start ZFS:0000041 ! Larval:Days 21-29 [Term] id: ZFA:0001244 name: epibranchial 5 namespace: zebrafish_anatomy def: "Epibranchial cartilage that is bilaterally paired and appears as a separate center of chondrification (6.2 mm) posterior to the lateral tip of epibranchial 4 and immediately anterior to the upper end of ceratobranchial 5. In the adult, epibranchial 5 persists as a small, cartilaginous rod extending from the cartilaginous junction of the posterodorsal tip of the uncinate process of epibranchial 4 and tip of ceratobranchial 5, to the cartilaginous junction of ceratobranchial 4 and epibranchial 4." [ZFIN:curator] synonym: "interbranchial IV" EXACT [] xref: TAO:0001244 xref: ZFIN:ZDB-ANAT-050711-55 is_a: ZFA:0001527 ! epibranchial cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001229 ! pharyngeal arch 7 skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001245 name: epibranchial 4 bone namespace: zebrafish_anatomy def: "Epibranchial bone that is bilaterally paired and articulates laterally with ceratobranchial 4 cartilage or bone. The narrow end of epibranchial 4 is slightly flared, and it articulates with cartilaginous pharyngobranchial 4." [ZFIN:curator] xref: TAO:0001245 xref: ZFIN:ZDB-ANAT-050711-56 is_a: ZFA:0000658 ! epibranchial bone relationship: develops_from ZFA:0001531 ! epibranchial 4 cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001230 ! pharyngeal arch 6 skeleton relationship: start ZFS:0000040 ! Larval:Days 14-20 [Term] id: ZFA:0001246 name: epibranchial 2 bone namespace: zebrafish_anatomy def: "Epibranchial bone that is bilaterally paired and articulates laterally with ceratobranchial 2 cartilage or bone. The flared medial end of epibranchial 2 articulates with bifurcate lateral projections from pharyngobranchial 1." [ZFIN:curator] xref: TAO:0001246 xref: ZFIN:ZDB-ANAT-050711-57 is_a: ZFA:0000658 ! epibranchial bone relationship: develops_from ZFA:0001530 ! epibranchial 2 cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001231 ! pharyngeal arch 4 skeleton relationship: start ZFS:0000041 ! Larval:Days 21-29 [Term] id: ZFA:0001247 name: epibranchial 3 bone namespace: zebrafish_anatomy def: "Epibranchial bone that is bilaterally paired and articulates laterally with ceratobranchial 3 cartilage or bone. The flared medial end of epibranchial3 articulates with the posterolateral edge of pharyngobranchial2 + 3." [ZFIN:curator] synonym: "infrapharyngobranchial 3" EXACT [] xref: TAO:0001247 xref: ZFIN:ZDB-ANAT-050711-58 is_a: ZFA:0000658 ! epibranchial bone relationship: develops_from ZFA:0001529 ! epibranchial 3 cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001232 ! pharyngeal arch 5 skeleton relationship: start ZFS:0000040 ! Larval:Days 14-20 [Term] id: ZFA:0001248 name: pharyngobranchial 1 namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050711-59 is_obsolete: true [Term] id: ZFA:0001249 name: exocrine pancreas namespace: zebrafish_anatomy def: "The exocrine pancreas is composed of acinar epithelial cells and ductal epithelium that manufacture the proteolytic enzymes and bicarbonate required for digestion." [ZFIN:curator] xref: TAO:0001249 xref: ZFIN:ZDB-ANAT-050711-6 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001369 ! anterior pancreatic bud relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000140 ! pancreas relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0001250 name: pharyngobranchial 2 bone namespace: zebrafish_anatomy def: "Pharyngobranchial 2 (misidentified as pharyngobranchial 1 in Cubbage & Mabee, 1993 and Mayden 1989) is present and separate from pharyngobranchial 3. It (8.0 mm) ossifies after pharyngobranchial 3. In the adult, the cartilaginous anterior end of the ossified pharyngobranchial 2 articulates with the cartilaginous medial tip of epibranchial 1. It articulates anterolaterally and posterolaterally with the anterior and posterior cartilaginous tips of epibranchial2. In Cyprinidae pb3 overlaps pb2 (Siebert, 1987; Cavender & Coburn, 1992) but does not fuse to it." [ZFIN:curator] synonym: "infrapharyngobranchial 2" EXACT [] xref: TAO:0001250 xref: ZFIN:ZDB-ANAT-050711-60 is_a: ZFA:0000527 ! pharyngobranchial bone relationship: develops_from ZFA:0001536 ! pharyngobranchial 2 cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001231 ! pharyngeal arch 4 skeleton relationship: start ZFS:0000042 ! Juvenile:Days 30-44 [Term] id: ZFA:0001251 name: pharyngobranchial 4 cartilage namespace: zebrafish_anatomy def: "Pharyngobranchial cartilage which forms in close proximity to or fused with pharyngobranchial 3; may not be distinguishable as a separate element in the adult. Remains cartilaginous." [ZFIN:curator] synonym: "infrapharyngobranchials" EXACT [] xref: TAO:0001251 xref: ZFIN:ZDB-ANAT-050711-61 is_a: ZFA:0001533 ! pharyngobranchial cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001230 ! pharyngeal arch 6 skeleton relationship: start ZFS:0000040 ! Larval:Days 14-20 [Term] id: ZFA:0001252 name: pharyngobranchial 3 bone namespace: zebrafish_anatomy def: "Pharyngobranchial bone of the fifth pharyngeal arch that lies approximately posteromedial to epibranchial 2 and medial to epibranchial 3." [ZFIN:curator] synonym: "pharyngobranchial 3 bones" EXACT PLURAL [] xref: TAO:0001252 xref: ZFIN:ZDB-ANAT-050711-62 is_a: ZFA:0000527 ! pharyngobranchial bone relationship: develops_from ZFA:0001534 ! pharyngobranchial 3 cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001232 ! pharyngeal arch 5 skeleton relationship: start ZFS:0000041 ! Larval:Days 21-29 [Term] id: ZFA:0001253 name: pharyngobranchial 2+3 namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050711-63 is_obsolete: true [Term] id: ZFA:0001254 name: cranial motoneurons namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050711-64 is_obsolete: true [Term] id: ZFA:0001256 name: lateral floor plate namespace: zebrafish_anatomy def: "Portion of tissue that is the lateral part of the floor plate." [ZFIN:curator] xref: TAO:0001256 xref: ZFIN:ZDB-ANAT-050711-66 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0000022 ! floor plate relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0001257 name: medial floor plate namespace: zebrafish_anatomy def: "Portion of tissue that is the medial part of the floor plate and is located adjacent to the notochord." [ZFIN:curator] xref: TAO:0001257 xref: ZFIN:ZDB-ANAT-050711-67 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0000022 ! floor plate relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0001258 name: floor plate rhombomere region namespace: zebrafish_anatomy def: "Floor plate that is part of the rhombomeres." [ZFIN:curator] synonym: "roof plate hindbrain region" RELATED [] xref: TAO:0001258 xref: ZFIN:ZDB-ANAT-050711-68 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0000022 ! floor plate relationship: part_of ZFA:0000029 ! hindbrain relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001259 name: forebrain ventricle namespace: zebrafish_anatomy synonym: "forebrain vesicle" EXACT [] synonym: "prosencephalic ventricle" EXACT [] xref: TAO:0001259 xref: ZFIN:ZDB-ANAT-050711-69 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0000109 ! forebrain relationship: part_of ZFA:0001261 ! ventricular system relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0001260 name: endocrine pancreas namespace: zebrafish_anatomy def: "The zebrafish endocrine pancreas is a portion of tissue composed of small groups of islet cells that are distributed throughout the exocrine pancreas. The islet cells produce insulin, glucagon and somatostatin." [ZFIN:curator] synonym: "pancreatic islet" EXACT [] xref: TAO:0001260 xref: ZFIN:ZDB-ANAT-050711-7 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0001370 ! posterior pancreatic bud relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000140 ! pancreas relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0001261 name: ventricular system namespace: zebrafish_anatomy xref: TAO:0001261 xref: ZFIN:ZDB-ANAT-050711-70 is_a: ZFA:0001439 ! anatomical system relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000012 ! central nervous system relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001262 name: gonad primordium namespace: zebrafish_anatomy def: "Portion of tissue that gives rise to the immature gonad." [ZFIN:curator] synonym: "gonadal primordium" EXACT [] synonym: "undifferentiated gonad" EXACT [] xref: TAO:0001262 xref: ZFIN:ZDB-ANAT-050711-71 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000039 ! Larval:Days 7-13 relationship: part_of ZFA:0000632 ! reproductive system relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001263 name: ovarian follicle stage I namespace: zebrafish_anatomy def: "Stage I follicles (less than 140 microns) are primary growth stage." [ZFIN:ZDB-PUB-961014-1020] synonym: "previtillogenic ovarian follicle" EXACT [] xref: TAO:0001263 xref: ZFIN:ZDB-ANAT-050711-72 is_a: ZFA:0001110 ! ovarian follicle relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000042 ! Juvenile:Days 30-44 [Term] id: ZFA:0001264 name: ovarian follicle stage IV namespace: zebrafish_anatomy def: "Stage IV (690-730 microns) are oocyte maturation." [ZFIN:ZDB-PUB-961014-1020] synonym: "mature ovarian follicle" EXACT [] xref: TAO:0001264 xref: ZFIN:ZDB-ANAT-050711-73 is_a: ZFA:0001110 ! ovarian follicle relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000042 ! Juvenile:Days 30-44 [Term] id: ZFA:0001265 name: ovarian follicle stage II namespace: zebrafish_anatomy def: "Stage II follicles (140-340 microns) are cortical alveolus stage." [ZFIN:ZDB-PUB-961014-1020] synonym: "ovarian follicles stage II" EXACT PLURAL [] xref: TAO:0001265 xref: ZFIN:ZDB-ANAT-050711-74 is_a: ZFA:0001110 ! ovarian follicle relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000042 ! Juvenile:Days 30-44 [Term] id: ZFA:0001266 name: ovarian follicle stage III namespace: zebrafish_anatomy def: "Stage III (340-690 microns) are vitellogenesis." [ZFIN:ZDB-PUB-961014-1020] synonym: "ovarian follicles stage III" EXACT PLURAL [] xref: TAO:0001266 xref: ZFIN:ZDB-ANAT-050711-75 is_a: ZFA:0001110 ! ovarian follicle relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000042 ! Juvenile:Days 30-44 [Term] id: ZFA:0001267 name: cranial vasculature namespace: zebrafish_anatomy synonym: "head vasculature" EXACT [] xref: TAO:0001267 xref: ZFIN:ZDB-ANAT-050711-76 is_a: ZFA:0005249 ! vasculature relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001268 name: sperm duct namespace: zebrafish_anatomy synonym: "sperm ducts" EXACT PLURAL [] xref: TAO:0001268 xref: ZFIN:ZDB-ANAT-050711-77 is_a: ZFA:0005171 ! duct relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000598 ! testis relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001269 name: regenerating fin namespace: zebrafish_anatomy synonym: "regenerating fins" EXACT PLURAL [] xref: TAO:0001269 xref: ZFIN:ZDB-ANAT-050711-78 is_a: ZFA:0000108 ! fin relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001270 name: blastema namespace: zebrafish_anatomy def: "A regenerating tissue composed of a proliferative mass of undifferentiated progenitor cells from which new differentiated structures arise." [ZFIN:ZDB-PUB-061108-12] synonym: "regeneration blastema" EXACT [ZFIN:ZDB-PUB-061108-12] xref: TAO:0001270 xref: ZFIN:ZDB-ANAT-050711-79 is_a: ZFA:0005147 ! regenerating tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001269 ! regenerating fin relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001271 name: neurohypophysis namespace: zebrafish_anatomy synonym: "posterior pituitary" EXACT [] xref: TAO:0001271 xref: ZFIN:ZDB-ANAT-050711-8 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000118 ! hypophysis relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001272 name: palatoquadrate arch namespace: zebrafish_anatomy def: "The dorsal portion of the first pharyngeal arch, comprising the upper jaw." [ZFIN:curator] synonym: "dorsal mandibular arch" EXACT [] synonym: "dorsal visceral arch 1" EXACT [] synonym: "upper jaw" EXACT [] synonym: "upper pharyngeal jaw" EXACT [] xref: TAO:0001272 xref: ZFIN:ZDB-ANAT-050711-80 is_a: ZFA:0001478 ! anatomical cluster relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000444 ! suspensorium relationship: part_of ZFA:0000590 ! oral region relationship: part_of ZFA:0001227 ! mandibular arch skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001273 name: ventral mandibular arch namespace: zebrafish_anatomy def: "The ventral portion of the first pharyngeal arch, comprising the lower jaw." [ZFIN:curator] synonym: "lower jaw" EXACT [] synonym: "mandible" EXACT [] synonym: "mandibular series" EXACT [] xref: TAO:0001273 xref: ZFIN:ZDB-ANAT-050711-81 is_a: ZFA:0001478 ! anatomical cluster relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000590 ! oral region relationship: part_of ZFA:0001227 ! mandibular arch skeleton relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0001274 name: coronomeckelian namespace: zebrafish_anatomy def: "The coronomeckelian is a membrane bone that ossifies on Meckel's cartilage where the tendon from the adductor mandibulae A3 inserts (6.1mm). In the adult, the coronomeckelian is a small, irregularly shaped bone that is fused to the dorsomedial surface of the anguloarticular, just dorsal to Meckel's cartilage." [ZFIN:curator] synonym: "coronoid" RELATED [] synonym: "sesamoid articular" EXACT [] xref: TAO:0001274 xref: ZFIN:ZDB-ANAT-050711-82 is_a: ZFA:0001590 ! dermal bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001273 ! ventral mandibular arch relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001275 name: mentomeckelian namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050711-83 is_obsolete: true [Term] id: ZFA:0001276 name: pharyngeal arch 2 skeleton namespace: zebrafish_anatomy synonym: "hyoid bars" EXACT [] xref: TAO:0001276 xref: ZFIN:ZDB-ANAT-050711-84 is_a: ZFA:0001216 ! splanchnocranium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001611 ! pharyngeal arch 2 relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001277 name: anterior chamber swim bladder namespace: zebrafish_anatomy def: "The anterior compartment of the swim bladder is thought to have acoustic resonance properties that play a key role in audition. It is connected to the posterior chamber via the ductus communicans." [ZFIN:ZDB-PUB-060306-11] xref: TAO:0001277 xref: ZFIN:ZDB-ANAT-060816-3 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0005337 ! anterior swim bladder bud relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000076 ! swim bladder relationship: start ZFS:0000040 ! Larval:Days 14-20 [Term] id: ZFA:0001278 name: posterior chamber swim bladder namespace: zebrafish_anatomy def: "The posterior compartment of the swim bladder plays a key role in buoyancy control. It is connected to the anterior chamber via the ductus communicans. This chamber corresponds to the swim bladder found in larval fish." [ZFIN:ZDB-PUB-060306-11] xref: TAO:0001278 xref: ZFIN:ZDB-ANAT-060816-4 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000076 ! swim bladder relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001279 name: branchiostegal ray 1 namespace: zebrafish_anatomy def: "Branchiostegal ray that is the most anterior ray which ossifies last (5.5 mm NL)." [ZFIN:curator] synonym: "branchiostegal rays 1" EXACT PLURAL [] xref: TAO:0001279 xref: ZFIN:ZDB-ANAT-050711-87 is_a: ZFA:0000476 ! branchiostegal ray relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001280 name: branchiostegal ray 3 namespace: zebrafish_anatomy def: "Branchiostegal ray that is the most posterior ray which ossifies first (3.4 mm NL)." [ZFIN:curator] synonym: "branchiostegal rays 3" EXACT PLURAL [] xref: TAO:0001280 xref: ZFIN:ZDB-ANAT-050711-88 is_a: ZFA:0000476 ! branchiostegal ray relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001281 name: branchiostegal ray 2 namespace: zebrafish_anatomy def: "Branchiostegal ray 2 is between rays 1 and 3 and ossifies second." [ZFIN:curator] synonym: "branchiostegal rays 2" EXACT PLURAL [] xref: TAO:0001281 xref: ZFIN:ZDB-ANAT-050711-89 is_a: ZFA:0000476 ! branchiostegal ray relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001282 name: adenohypophysis namespace: zebrafish_anatomy def: "The anterior lobe of the hypophysis (pituitary gland). This lobe contains cells that produce prolactin, growth hormone, thyroid-stimulating hormone, follicle-stimulating hormone and proopiomelanocortin. In contrast to mammalian vertebrates, the adenohypophysis remains in a subepithelial position and there exists no equivalent of Rathke's pouch in zebrafish." [ZFIN:ZDB-PUB-040202-1] comment: Changed start to long-pec from protruding mouth. In future, make a primordium and split the stages. synonym: "anterior hypophysis" EXACT [] synonym: "anterior pituitary" EXACT [] xref: TAO:0001282 xref: ZFIN:ZDB-ANAT-050711-9 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001198 ! adenohypophyseal placode relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000118 ! hypophysis relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0001283 name: pupil namespace: zebrafish_anatomy def: "Anatomical space that is located in the center of the iris and allows light to impinge on the retina." [http:www.encyclopedia.thefreedictionary.com/pupil] synonym: "pupils" EXACT PLURAL [] xref: TAO:0001283 xref: ZFIN:ZDB-ANAT-050915-88 is_a: ZFA:0001643 ! anatomical space relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000107 ! eye relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001284 name: optic fissure namespace: zebrafish_anatomy def: "Groove that is in the ventral optic cup and through which blood vessels pass to the enclosed mesenchyme." [http:www.medical-dictionary.thefreedictionary.com/optic+fissure] synonym: "choroid fissure" RELATED [] synonym: "optic fissures" EXACT PLURAL [] xref: TAO:0001284 xref: ZFIN:ZDB-ANAT-050915-89 is_a: ZFA:0001690 ! groove relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0001202 ! optic cup relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0001285 name: intersegmental vessel namespace: zebrafish_anatomy synonym: "intersegmental vessels" EXACT PLURAL [] synonym: "intersomitic vessels" EXACT [] synonym: "segmental vessel" EXACT [] xref: TAO:0001285 xref: ZFIN:ZDB-ANAT-050915-90 is_a: ZFA:0005314 ! blood vessel relationship: develops_from ZFA:0000014 ! dorsal aorta relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0005024 ! trunk vasculature relationship: part_of ZFA:0005037 ! post-vent vasculature relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001286 name: caudal vein plexus namespace: zebrafish_anatomy xref: TAO:0001286 xref: ZFIN:ZDB-ANAT-050915-91 is_a: ZFA:0005037 ! post-vent vasculature relationship: end ZFS:0000039 ! Larval:Days 7-13 relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001287 name: renal tubule namespace: zebrafish_anatomy def: "Renal duct that collects filtrate from the renal corpuscle and transports it to the collecting duct. Different parts of the renal tubule reabsorb specific components of the filtrate to leave only waste." [ZFIN:curator] synonym: "mesonephric tubule" EXACT [] synonym: "renal tubules" EXACT PLURAL [] xref: TAO:0001287 xref: ZFIN:ZDB-ANAT-050915-92 is_a: ZFA:0005289 ! renal duct relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005282 ! nephron relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001288 name: renal glomerulus namespace: zebrafish_anatomy def: "The multi-tissue structure where the glomerular basement membrane supported by mesonephric podocytes, filters blood from the glomerular capillaries." [ZFIN:curator] synonym: "glomerular capillary tuft" RELATED [] synonym: "renal glomeruli" EXACT PLURAL [] xref: TAO:0001288 xref: ZFIN:ZDB-ANAT-050915-93 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005281 ! renal corpuscle relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001289 name: ciliary marginal zone namespace: zebrafish_anatomy def: "Proliferative region at the periphery of the retina where retinal stem cells are located. After 60 hpf, the CMZ is the source of most retinal growth." [ZFIN:ZDB-PUB-050427-5] synonym: "circumferential germinal zone" EXACT [] synonym: "CMZ" EXACT [] synonym: "peripheral growth zone" EXACT [] synonym: "retinal ciliary marginal zone" EXACT [] xref: TAO:0001289 xref: ZFIN:ZDB-ANAT-050915-94 is_a: ZFA:0000098 ! proliferative region relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000152 ! retina relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0001290 name: stomodeum namespace: zebrafish_anatomy def: "Anterior part of the embryonic alimentary canal formed as an invagination of the ectoderm; the future mouth." [ZFIN:curator] xref: TAO:0001290 xref: ZFIN:ZDB-ANAT-050915-95 is_a: ZFA:0000292 ! surface structure relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0000112 ! gut relationship: start ZFS:0000031 ! Pharyngula:Prim-25 [Term] id: ZFA:0001291 name: facial ganglion namespace: zebrafish_anatomy def: "The sensory ganglion of the facial nerve." [ZFIN:curator] synonym: "geniculate ganglion" EXACT [] synonym: "gVII" EXACT [] xref: TAO:0001291 xref: ZFIN:ZDB-ANAT-050915-96 is_a: ZFA:0001555 ! epibranchial ganglion relationship: develops_from ZFA:0000762 ! facio-acoustic neural crest relationship: develops_from ZFA:0001295 ! facial placode relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001292 name: epiphyseal stalk namespace: zebrafish_anatomy def: "The stalk emanates from the diencephalic roof at a left-of-medial position." [ZFIN:curator] synonym: "pineal stalk" EXACT [] xref: TAO:0001292 xref: ZFIN:ZDB-ANAT-050915-97 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001359 ! pineal complex relationship: start ZFS:0000043 ! Juvenile:Days 45-89 [Term] id: ZFA:0001293 name: posterior kidney namespace: zebrafish_anatomy synonym: "posterior kidneys" EXACT PLURAL [] xref: TAO:0001293 xref: ZFIN:ZDB-ANAT-050915-98 is_a: ZFA:0000496 ! compound organ relationship: develops_from ZFA:0000151 ! pronephros relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000529 ! kidney relationship: start ZFS:0000038 ! Larval:Day 6 [Term] id: ZFA:0001294 name: epibranchial placode namespace: zebrafish_anatomy def: "Neurogenic placodes that generate neurons of the distal facial, glossopharyngeal and vagal ganglia, which convey sensation from the viscera, including pharyngeal endoderm structures, to the CNS. The epibranchial placodes are positioned ventrally to the ear and dorsally to the posterior pharyngeal pouches" [ZFIN:ZDB-PUB-050804-2, ZFIN:ZDB-PUB-070122-31] synonym: "epibranchial placodes" EXACT PLURAL [] xref: TAO:0001294 xref: ZFIN:ZDB-ANAT-050915-99 is_a: ZFA:0001309 ! neurogenic placode relationship: develops_from ZFA:0007061 ! epibranchial field relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0000142 ! peripheral nervous system relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001295 name: facial placode namespace: zebrafish_anatomy def: "Epibranchial placode that gives rise to the facial ganglia." [ZFIN:ZDB-PUB-070122-31] synonym: "geniculate placode" EXACT [] xref: TAO:0001295 xref: ZFIN:ZDB-ANAT-050915-100 is_a: ZFA:0001294 ! epibranchial placode relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001296 name: glossopharyngeal placode namespace: zebrafish_anatomy def: "Epibranchial placode that gives rise to the glossopharyngeal ganglia. Associated with the third pharyngeal arch." [ZFIN:ZDB-PUB-070122-31] synonym: "petrosal placode" EXACT [] xref: TAO:0001296 xref: ZFIN:ZDB-ANAT-050915-101 is_a: ZFA:0001294 ! epibranchial placode relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001297 name: vagal placode 1 namespace: zebrafish_anatomy def: "Epibranchial placode that gives rise to vagal ganglion 1." [ZFIN:ZDB-PUB-070122-31] xref: TAO:0001297 xref: ZFIN:ZDB-ANAT-050915-102 is_a: ZFA:0001294 ! epibranchial placode relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001298 name: vagal placode 2 namespace: zebrafish_anatomy def: "Epibranchial placode that gives rise to vagal ganglion 2." [ZFIN:ZDB-PUB-070122-31] xref: TAO:0001298 xref: ZFIN:ZDB-ANAT-050915-103 is_a: ZFA:0001294 ! epibranchial placode relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001299 name: vagal placode 3 namespace: zebrafish_anatomy def: "Epibranchial placode that gives rise to vagal ganglion 3." [ZFIN:ZDB-PUB-070122-3] xref: TAO:0001299 xref: ZFIN:ZDB-ANAT-050915-104 is_a: ZFA:0001294 ! epibranchial placode relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001300 name: vagal placode 4 namespace: zebrafish_anatomy def: "Epibranchial placode that gives rise to vagal ganglion 4." [ZFIN:ZDB-PUB-070122-31] xref: TAO:0001300 xref: ZFIN:ZDB-ANAT-050915-105 is_a: ZFA:0001294 ! epibranchial placode relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001301 name: glossopharyngeal ganglion namespace: zebrafish_anatomy synonym: "gIX" EXACT [] synonym: "petrosal ganglion" EXACT [] xref: TAO:0001301 xref: ZFIN:ZDB-ANAT-050915-106 is_a: ZFA:0001555 ! epibranchial ganglion relationship: develops_from ZFA:0001296 ! glossopharyngeal placode relationship: develops_from ZFA:0007066 ! glossopharyngeal neural crest relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001302 name: vagal ganglion 1 namespace: zebrafish_anatomy synonym: "gX1" EXACT [] synonym: "nodose ganglion 1" EXACT [] xref: TAO:0001302 xref: ZFIN:ZDB-ANAT-050915-107 is_a: ZFA:0007067 ! vagal ganglion relationship: develops_from ZFA:0001297 ! vagal placode 1 relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001303 name: vagal ganglion 2 namespace: zebrafish_anatomy synonym: "gX2" EXACT [] synonym: "nodose ganglion 2" EXACT [] xref: TAO:0001303 xref: ZFIN:ZDB-ANAT-050915-108 is_a: ZFA:0007067 ! vagal ganglion relationship: develops_from ZFA:0001298 ! vagal placode 2 relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001304 name: vagal ganglion 3 namespace: zebrafish_anatomy synonym: "gX3" EXACT [] synonym: "nodose ganglion 3" EXACT [] xref: TAO:0001304 xref: ZFIN:ZDB-ANAT-050915-109 is_a: ZFA:0007067 ! vagal ganglion relationship: develops_from ZFA:0001299 ! vagal placode 3 relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001305 name: vagal ganglion 4 namespace: zebrafish_anatomy synonym: "gX4" EXACT [] synonym: "nodose ganglion 4" EXACT [] xref: TAO:0001305 xref: ZFIN:ZDB-ANAT-050915-110 is_a: ZFA:0007067 ! vagal ganglion relationship: develops_from ZFA:0001300 ! vagal placode 4 relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001306 name: pharyngeal arch namespace: zebrafish_anatomy synonym: "pharyngeal arches" EXACT PLURAL [] xref: TAO:0001306 xref: ZFIN:ZDB-ANAT-050915-111 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001114 ! head relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001307 name: pharyngeal musculature namespace: zebrafish_anatomy xref: TAO:0001307 xref: ZFIN:ZDB-ANAT-050915-112 is_a: ZFA:0000328 ! cephalic musculature relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001306 ! pharyngeal arch relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001308 name: organism subdivision namespace: zebrafish_anatomy def: "Anatomical structure which is a primary subdivision of whole organism. The mereological sum of these is the whole organism." [ZFIN:curator] synonym: "body part" EXACT [] xref: CARO:0000032 xref: TAO:0001308 xref: ZFIN:ZDB-ANAT-050915-113 is_a: ZFA:0000037 ! anatomical structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001094 ! whole organism relationship: start ZFS:0000017 ! Gastrula:50%-epiboly [Term] id: ZFA:0001309 name: neurogenic placode namespace: zebrafish_anatomy def: "Neurogenic placodes are transient ectodermal thickenings that form at the border of the neural plate and epidermis and give rise to sensory neurons of the cranial ganglia" [ZFIN:ZDB-PUB-050804-2, ZFIN:ZDB-PUB-070122-31] synonym: "neurogenic placodes" EXACT PLURAL [] xref: TAO:0001309 xref: ZFIN:ZDB-ANAT-050915-114 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0007059 ! neurogenic field relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0000016 ! ectoderm relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0001310 name: dorsolateral placode namespace: zebrafish_anatomy def: "Lateral neurogenic placodes positioned dorsal of the epibranchial placodes." [ZFIN:curator] synonym: "dorsolateral placodes" EXACT PLURAL [] xref: TAO:0001310 xref: ZFIN:ZDB-ANAT-050915-115 is_a: ZFA:0001309 ! neurogenic placode relationship: develops_from ZFA:0007060 ! dorsolateral field relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0001311 name: roof plate rhombomere region namespace: zebrafish_anatomy synonym: "roof plate hindbrain" RELATED [] xref: TAO:0001311 xref: ZFIN:ZDB-ANAT-051116-1 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0001064 ! rhombomere relationship: part_of ZFA:0007058 ! roof plate relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001312 name: dorsal anterior lateral line ganglion namespace: zebrafish_anatomy synonym: "anterodorsal lateral line ganglion" EXACT [] xref: TAO:0001312 xref: ZFIN:ZDB-ANAT-050915-116 is_a: ZFA:0001391 ! anterior lateral line ganglion relationship: develops_from ZFA:0001316 ! anterior lateral line placode relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001313 name: ventral anterior lateral line ganglion namespace: zebrafish_anatomy synonym: "anteroventral lateral line ganglion" EXACT [] xref: TAO:0001313 xref: ZFIN:ZDB-ANAT-050915-117 is_a: ZFA:0001391 ! anterior lateral line ganglion relationship: develops_from ZFA:0001316 ! anterior lateral line placode relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001314 name: posterior lateral line ganglion namespace: zebrafish_anatomy def: "The posterior lateral line ganglion develops from a cranial ectodermal placode and contains sensory neurons that innervate the posterior lateral line system." [ZFIN:curator] synonym: "posterior lateral line ganglia" EXACT PLURAL [] xref: TAO:0001314 xref: ZFIN:ZDB-ANAT-050915-118 is_a: ZFA:0000120 ! lateral line ganglion relationship: develops_from ZFA:0001156 ! posterior lateral line placode relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001315 name: atrioventricular canal namespace: zebrafish_anatomy def: "The part of the heart connecting the atrium to the cardiac ventricle." [ZFIN:curator] synonym: "AV canal" EXACT [] xref: TAO:0001315 xref: ZFIN:ZDB-ANAT-051116-2 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001723 ! presumptive atrioventricular canal relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0000114 ! heart relationship: start ZFS:0000032 ! Pharyngula:High-pec [Term] id: ZFA:0001316 name: anterior lateral line placode namespace: zebrafish_anatomy synonym: "anterior lateral line placodes" EXACT PLURAL [] xref: TAO:0001316 xref: ZFIN:ZDB-ANAT-050915-119 is_a: ZFA:0001310 ! dorsolateral placode relationship: end ZFS:0000031 ! Pharyngula:Prim-25 relationship: part_of ZFA:0001468 ! anterior lateral line system relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001317 name: endocardial cushion namespace: zebrafish_anatomy def: "Swellings of tissue present between the endocardial and myocardial cell layers that will give rise to the interstitial cells of the cardiac valves." [ZFIN:curator] comment: ZDB-PUB-080309-14 says these don't exist but looked at 55 hpf rather then 36 hpf. synonym: "endocardial cushions" EXACT PLURAL [] xref: TAO:0001317 xref: ZFIN:ZDB-ANAT-051116-3 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000035 ! Larval:Protruding-mouth relationship: part_of ZFA:0000114 ! heart relationship: part_of ZFA:0001320 ! endocardium relationship: start ZFS:0000034 ! Hatching:Pec-fin [Term] id: ZFA:0001318 name: cardiac jelly namespace: zebrafish_anatomy def: "The extracellular matrix between the myocardium and the endocardium. The cardiac jelly plays a central role in the septation of the heart and comprises most of the thickness of the heart wall at early stages, but disappears as the heart differentiates." [ZFIN:curator] xref: TAO:0001318 xref: ZFIN:ZDB-ANAT-051116-4 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0000149 ! primitive heart tube relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0001319 name: myocardium namespace: zebrafish_anatomy synonym: "cardiac muscle" EXACT [] synonym: "heart muscle " RELATED [] xref: TAO:0001319 xref: ZFIN:ZDB-ANAT-051116-5 is_a: ZFA:0005280 ! cardiac muscle relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000114 ! heart relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001320 name: endocardium namespace: zebrafish_anatomy def: "Layer that lines the lumen of the heart." [ZFIN:curator] xref: TAO:0001320 xref: ZFIN:ZDB-ANAT-051116-6 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0001724 ! presumptive endocardium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000114 ! heart relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001321 name: neurocranial trabecula namespace: zebrafish_anatomy synonym: "neurocranial trabeculae" EXACT PLURAL [] synonym: "trabecula" EXACT [] synonym: "trabecular cartilage" EXACT [] xref: TAO:0001321 xref: ZFIN:ZDB-ANAT-051116-7 is_a: ZFA:0001461 ! chondrocranium cartilage relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0000351 ! olfactory region relationship: part_of ZFA:0001580 ! neurocranium relationship: start ZFS:0000032 ! Pharyngula:High-pec [Term] id: ZFA:0001322 name: dorsoventral diencephalic tract namespace: zebrafish_anatomy def: "A tract originating in the epiphysis and fasiculating with the tract of the postoptic commissure." [ZFIN:ZDB-PUB-961014-955] synonym: "DVDT" EXACT [] xref: TAO:0001322 xref: ZFIN:ZDB-ANAT-060131-6 is_a: ZFA:0000338 ! diencephalic white matter relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001323 name: mid intestine namespace: zebrafish_anatomy def: "The terminal region of the mid intestine is comprised of specialized enterocytes that appear to play a role in mucosal immunity." [ZFIN:ZDB-PUB-050120-6] xref: TAO:0001323 xref: ZFIN:ZDB-ANAT-060131-7 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001338 ! intestine relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0001324 name: enteric musculature namespace: zebrafish_anatomy synonym: "tunica muscularis" RELATED [http:/www.vivo.colostate.edu/hbooks/pathphys/digestion/basics/gi_microanatomy.html] xref: TAO:0001324 xref: ZFIN:ZDB-ANAT-060131-8 is_a: ZFA:0000548 ! musculature system relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000112 ! gut relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001325 name: neural prezygapophysis namespace: zebrafish_anatomy def: "Paired, anteromedially directed processes from the neural arches, ligamentously joined to the postzygapophyses of the preceding vertebra." [ZFIN:curator] synonym: "neural prezygapophyses" EXACT PLURAL [] synonym: "neural prezygopophyses" EXACT [] xref: TAO:0001325 xref: ZFIN:ZDB-ANAT-060331-7 is_a: ZFA:0001591 ! endochondral bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001066 ! neural arch relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001326 name: lens epithelium namespace: zebrafish_anatomy def: "Epithelium which borders the anterior and equitorial region of the lens. Lens growth in zebrafish occurs via the differentiation of additional fibre cells from lens epithelial cells." [ZFIN:ZDB-PUB-070504-24, ZFIN:ZDB-PUB-100202-20] xref: TAO:0001326 xref: ZFIN:ZDB-ANAT-060131-9 is_a: ZFA:0001486 ! epithelium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000035 ! lens relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001327 name: abdominal musculature namespace: zebrafish_anatomy xref: TAO:0001327 xref: ZFIN:ZDB-ANAT-060131-10 is_a: ZFA:0000473 ! trunk musculature relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0001328 name: neuromere namespace: zebrafish_anatomy def: "A metameric segment of the central nervous system." [ZFIN:curator] synonym: "neural segment" EXACT [] synonym: "neuromeres" EXACT PLURAL [] xref: TAO:0001328 xref: ZFIN:ZDB-ANAT-060131-11 is_a: ZFA:0001308 ! organism subdivision relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000012 ! central nervous system relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001329 name: retinal inner plexiform layer namespace: zebrafish_anatomy def: "The layer within the retina where the bipolar cells synapse with the dendrites of the ganglion cells." [ZFIN:curator] synonym: "inner plexiform layer" EXACT [] xref: TAO:0001329 xref: ZFIN:ZDB-ANAT-051116-8 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000046 ! retinal neural layer relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001330 name: retinal outer plexiform layer namespace: zebrafish_anatomy def: "The layer within the retina where the bipolar cells synapse with the photoreceptor cells." [ZFIN:curator] synonym: "retinal outer plexiform layers" EXACT PLURAL [] xref: TAO:0001330 xref: ZFIN:ZDB-ANAT-051116-9 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000046 ! retinal neural layer relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001331 name: outer limiting membrane namespace: zebrafish_anatomy synonym: "external limiting membrane" EXACT [] synonym: "outer limiting membranes" EXACT PLURAL [] xref: TAO:0001331 xref: ZFIN:ZDB-ANAT-051116-10 is_a: ZFA:0000382 ! acellular anatomical structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000046 ! retinal neural layer relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001332 name: spinal neuromere namespace: zebrafish_anatomy synonym: "spinal cord segment" EXACT [] synonym: "spinal neuromeres" EXACT PLURAL [] xref: TAO:0001332 xref: ZFIN:ZDB-ANAT-060131-12 is_a: ZFA:0001328 ! neuromere is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000075 ! spinal cord relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001333 name: visceral organ namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060131-13 is_obsolete: true [Term] id: ZFA:0001334 name: presumptive enteric nervous system namespace: zebrafish_anatomy xref: TAO:0001334 xref: ZFIN:ZDB-ANAT-060131-14 is_a: ZFA:0001116 ! presumptive structure relationship: develops_from ZFA:0000818 ! vagal neural crest relationship: end ZFS:0000032 ! Pharyngula:High-pec relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001335 name: supradorsal namespace: zebrafish_anatomy def: "Supradorsals are small paired nodules of cartilage positioned at the distal ends of neural arches and the proximal end of neural spines (Arratia et al., 2001)." [ZFIN:curator] synonym: "supradorsals" EXACT PLURAL [] xref: TAO:0001335 xref: ZFIN:ZDB-ANAT-060331-8 is_a: ZFA:0001457 ! postcranial axial cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001066 ! neural arch relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001336 name: neural spine namespace: zebrafish_anatomy def: "Neural spines are extensions of neural arches dorsal to the neural canal in the median skeletogenous septum. Neural spines are typically unpaired median structures but can be paired in some instances, e.g., in the abdominal region of basal teleosts such as Leptolepis, Elops, Megalops, and Hiodon)." [ZFIN:curator] synonym: "neural spines" EXACT PLURAL [] xref: TAO:0001336 xref: ZFIN:ZDB-ANAT-060331-9 is_a: ZFA:0001591 ! endochondral bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001066 ! neural arch relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001338 name: intestine namespace: zebrafish_anatomy xref: TAO:0001338 xref: ZFIN:ZDB-ANAT-060131-16 is_a: ZFA:0001490 ! cavitated compound organ relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000112 ! gut relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0001339 name: nucleus of the tract of the anterior commissure namespace: zebrafish_anatomy def: "Telencephalic nucleus from which the axons of the anterior commissure originate." [ZFIN:curator] synonym: "ntAC" EXACT [] xref: TAO:0001339 xref: ZFIN:ZDB-ANAT-060131-17 is_a: ZFA:0001660 ! telencephalic nucleus relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001340 name: nucleus of the tract of the postoptic commissure namespace: zebrafish_anatomy def: "The nucleus containing the cell bodies of neurons whose axons form the postoptic commissure." [ZFIN:curator] synonym: "ntPOC" EXACT [] xref: TAO:0001340 xref: ZFIN:ZDB-ANAT-060131-18 is_a: ZFA:0001659 ! diencephalic nucleus relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001341 name: intervening zone namespace: zebrafish_anatomy def: "A zone of delayed differentiation at the midbrain hindbrain boundary. The IZ separates midbrain from anterior hindbrain neuronal clusters and has been described in all vertebrates." [ZFIN:ZDB-PUB-030307-1] synonym: "IZ" EXACT [] xref: TAO:0001341 xref: ZFIN:ZDB-ANAT-060131-19 relationship: develops_from ZFA:0001342 ! presumptive intervening zone relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0000042 ! midbrain hindbrain boundary relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0001342 name: presumptive intervening zone namespace: zebrafish_anatomy xref: TAO:0001342 xref: ZFIN:ZDB-ANAT-060131-20 is_a: ZFA:0001105 ! embryonic structure relationship: end ZFS:0000025 ! Segmentation:10-13 somites relationship: part_of ZFA:0007023 ! posterior neural keel relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0001343 name: telencephalon diencephalon boundary namespace: zebrafish_anatomy xref: TAO:0001343 xref: ZFIN:ZDB-ANAT-060131-21 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000109 ! forebrain relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001344 name: zona limitans intrathalamica namespace: zebrafish_anatomy def: "The border between the dorsal and ventral thalamus." [ZFIN:curator] synonym: "zli" EXACT [] xref: TAO:0001344 xref: ZFIN:ZDB-ANAT-060131-22 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001215 ! thalamus relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001345 name: interrenal gland namespace: zebrafish_anatomy def: "An epithelial structure consisting of steroid producing cells interposed with chromaffin cells embedded within the head kidney. The interrenal gland is thought to be the equivalent of the mammalian adrenal cortex in zebrafish." [ZFIN:ZDB-PUB-030408-12] xref: TAO:0001345 xref: ZFIN:ZDB-ANAT-060131-23 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001346 ! interrenal primordium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000669 ! head kidney relationship: start ZFS:0000035 ! Larval:Protruding-mouth [Term] id: ZFA:0001346 name: interrenal primordium namespace: zebrafish_anatomy xref: TAO:0001346 xref: ZFIN:ZDB-ANAT-060131-24 relationship: develops_from ZFA:0001206 ! intermediate mesoderm relationship: end ZFS:0000035 ! Larval:Protruding-mouth relationship: part_of ZFA:0000529 ! kidney relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0001347 name: stratum fibrosum et griseum superficiale namespace: zebrafish_anatomy synonym: "strata fibrosum et griseum superficiales" EXACT PLURAL [] xref: TAO:0001347 xref: ZFIN:ZDB-ANAT-060131-25 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000445 ! optic tectum relationship: start ZFS:0000038 ! Larval:Day 6 [Term] id: ZFA:0001348 name: stratum marginale namespace: zebrafish_anatomy synonym: "strata marginale" EXACT PLURAL [] xref: TAO:0001348 xref: ZFIN:ZDB-ANAT-060131-26 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000445 ! optic tectum relationship: start ZFS:0000038 ! Larval:Day 6 [Term] id: ZFA:0001349 name: stratum opticum namespace: zebrafish_anatomy synonym: "strata opticum" EXACT PLURAL [] xref: TAO:0001349 xref: ZFIN:ZDB-ANAT-060131-27 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000445 ! optic tectum relationship: start ZFS:0000038 ! Larval:Day 6 [Term] id: ZFA:0001350 name: stratum griseum centrale namespace: zebrafish_anatomy xref: TAO:0001350 xref: ZFIN:ZDB-ANAT-060131-28 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000445 ! optic tectum relationship: start ZFS:0000038 ! Larval:Day 6 [Term] id: ZFA:0001351 name: stratum album centrale namespace: zebrafish_anatomy synonym: "strata album centrales" EXACT PLURAL [] xref: TAO:0001351 xref: ZFIN:ZDB-ANAT-060131-29 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000445 ! optic tectum relationship: start ZFS:0000038 ! Larval:Day 6 [Term] id: ZFA:0001352 name: stratum periventriculare namespace: zebrafish_anatomy synonym: "strata periventriculare" EXACT PLURAL [] xref: TAO:0001352 xref: ZFIN:ZDB-ANAT-060131-30 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000445 ! optic tectum relationship: start ZFS:0000038 ! Larval:Day 6 [Term] id: ZFA:0001355 name: primitive meninx namespace: zebrafish_anatomy synonym: "meninges" EXACT [] synonym: "meninx primitiva" EXACT [] xref: TAO:0001355 xref: ZFIN:ZDB-ANAT-060131-33 relationship: develops_from ZFA:0000045 ! neural crest relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000396 ! nervous system relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001356 name: terminal nerve namespace: zebrafish_anatomy def: "The terminal nerve, located anterior to cranial nerve I, is comprised of a group of cells with somata adjacent to the olfactory bulb and processes that extend anteriorly to the olfactory epithelium and posteriorly to the telencephalon. In teleost fish an additional group of axons extends along the optic tract and delivers putative neuromodulators to the retina. It is thought to develop from cranial neural crest." [PMID:15821344, ZFIN:ZDB-PUB-041202-1] synonym: "nervus terminalis" EXACT [] xref: TAO:0001356 xref: ZFIN:ZDB-ANAT-060131-34 is_a: ZFA:0000641 ! cranial nerve relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001357 name: alar plate midbrain region namespace: zebrafish_anatomy def: "Portion of tissue that is ventrolateral to the roof plate and part of the midbrain." [ISBN:0444517383, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001357 xref: ZFIN:ZDB-ANAT-060131-35 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000000 ! Unknown relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0007039 ! midbrain neural tube relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001358 name: roof plate diencephalic region namespace: zebrafish_anatomy xref: TAO:0001358 xref: ZFIN:ZDB-ANAT-060131-36 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0000101 ! diencephalon relationship: part_of ZFA:0007058 ! roof plate relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001359 name: pineal complex namespace: zebrafish_anatomy xref: TAO:0001359 xref: ZFIN:ZDB-ANAT-060131-37 is_a: ZFA:0001512 ! anatomical group relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000509 ! epithalamus relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001360 name: parapineal organ namespace: zebrafish_anatomy def: "An unpaired left-sided accessory organ which plays a role in establishing lateral brain left right asymmetry." [ZFIN:ZDB-PUB-030206-1] xref: TAO:0001360 xref: ZFIN:ZDB-ANAT-060131-38 is_a: ZFA:0000496 ! compound organ relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001359 ! pineal complex relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0001361 name: basiventral namespace: zebrafish_anatomy def: "Basiventrals are bilaterally paired cartilages lateral to the notochord which are replaced by ossified parapophyses or hemal arches." [ZFIN:curator] synonym: "arcualia" RELATED [] xref: TAO:0001361 xref: ZFIN:ZDB-ANAT-060331-10 is_a: ZFA:0001457 ! postcranial axial cartilage relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001362 name: parapophysis namespace: zebrafish_anatomy def: "Parapophyses are lateral or ventrolateral projections of vertebrae to which ribs are attached in Danio rerio. Parapophyses can arise through replacement ossification of a basiventral or form directly in bone. They are separated from the centrum in basal teleosts, e.g., Leptolepis coryphaenoides, Megalops and Elops." [ZFIN:curator] synonym: "lateral process of basiventral" EXACT [] synonym: "parapophyses" EXACT PLURAL [] synonym: "transverse process" EXACT [] xref: TAO:0001362 xref: ZFIN:ZDB-ANAT-060331-11 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001361 ! basiventral relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001582 ! non-Weberian precaudal vertebra relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001363 name: neural complex namespace: zebrafish_anatomy alt_id: ZFA:0001398 def: "The neural complex is the collective term for the ossified supraneurals (Sn 2 and Sn 3) and their membrane bone extensions above the first four vertebrae. (Hoffmann and Britz, 2006)," [ZFIN:ZDB-PUB-031103-13] synonym: "Weberian supraneural" EXACT [] xref: TAO:0001363 xref: ZFIN:ZDB-ANAT-060331-12 is_a: ZFA:0001478 ! anatomical cluster relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001188 ! Weberian apparatus relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0001364 name: hemal spine namespace: zebrafish_anatomy def: "Hemal spines are extensions of hemal arches in the ventral skeletogenous septum of the caudal region." [ZFIN:curator] synonym: "haemal spine" EXACT [] xref: TAO:0001364 xref: ZFIN:ZDB-ANAT-060331-13 is_a: ZFA:0001591 ! endochondral bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000519 ! hemal arch relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001365 name: trigeminal motor nucleus namespace: zebrafish_anatomy synonym: "motor nucleus V" EXACT [] synonym: "nV" EXACT [] xref: TAO:0001365 xref: ZFIN:ZDB-ANAT-060131-39 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000545 ! medulla oblongata relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001366 name: tract of the postoptic commissure namespace: zebrafish_anatomy synonym: "TPOC" EXACT [] xref: TAO:0001366 xref: ZFIN:ZDB-ANAT-060131-40 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000059 ! postoptic commissure relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001367 name: forebrain midbrain boundary namespace: zebrafish_anatomy def: "The boundary between the diencephalon and the mesencephalon." [ZFIN:curator] xref: TAO:0001367 xref: ZFIN:ZDB-ANAT-060131-41 is_a: ZFA:0001689 ! anatomical line relationship: develops_from ZFA:0007040 ! forebrain midbrain boundary neural tube relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000008 ! brain relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0001368 name: presumptive forebrain midbrain boundary namespace: zebrafish_anatomy xref: TAO:0001368 xref: ZFIN:ZDB-ANAT-060131-42 is_a: ZFA:0001105 ! embryonic structure relationship: end ZFS:0000020 ! Gastrula:75%-epiboly relationship: part_of ZFA:0000146 ! presumptive brain relationship: part_of ZFA:0007014 ! anterior presumptive neural plate relationship: start ZFS:0000020 ! Gastrula:75%-epiboly [Term] id: ZFA:0001369 name: anterior pancreatic bud namespace: zebrafish_anatomy synonym: "ventral pancreatic anlage" EXACT [] xref: TAO:0001369 xref: ZFIN:ZDB-ANAT-060131-43 is_a: ZFA:0001390 ! pancreatic bud relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000031 ! Pharyngula:Prim-25 [Term] id: ZFA:0001370 name: posterior pancreatic bud namespace: zebrafish_anatomy synonym: "dorsal pancreatic anlage" EXACT [] xref: TAO:0001370 xref: ZFIN:ZDB-ANAT-060131-44 is_a: ZFA:0001390 ! pancreatic bud relationship: end ZFS:0000033 ! Hatching:Long-pec relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001371 name: pancreatic system namespace: zebrafish_anatomy xref: TAO:0001371 xref: ZFIN:ZDB-ANAT-060131-45 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000339 ! digestive system relationship: part_of ZFA:0001158 ! endocrine system relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001372 name: pancreatic duct namespace: zebrafish_anatomy xref: TAO:0001372 xref: ZFIN:ZDB-ANAT-060131-46 is_a: ZFA:0005162 ! digestive system duct relationship: develops_from ZFA:0001369 ! anterior pancreatic bud relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001371 ! pancreatic system relationship: start ZFS:0000032 ! Pharyngula:High-pec [Term] id: ZFA:0001373 name: migratory slow muscle precursor cell namespace: zebrafish_anatomy def: "Cells that initially are located adjacent to the spinal cord and notochord along that migrate from their initial medial position radially through the myotome to the lateral surface of the somites." [ZFIN:curator] synonym: "migratory slow muscle precursor cells" EXACT PLURAL [] xref: TAO:0001373 xref: ZFIN:ZDB-ANAT-060131-47 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0000003 ! adaxial cell relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0000155 ! somite relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0001374 name: atrial myocardium namespace: zebrafish_anatomy xref: TAO:0001374 xref: ZFIN:ZDB-ANAT-060131-48 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000471 ! atrium relationship: part_of ZFA:0001319 ! myocardium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001375 name: ventriculo bulbo valve namespace: zebrafish_anatomy def: "A heart valve located between the ventricle and bulbus arteriosus." [ZFIN:curator] synonym: "bulboventricular valve" EXACT [] xref: TAO:0001375 xref: ZFIN:ZDB-ANAT-060131-49 is_a: ZFA:0005065 ! heart valve relationship: develops_from ZFA:0001317 ! endocardial cushion relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000009 ! cardiac ventricle relationship: part_of ZFA:0000173 ! bulbus arteriosus relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001376 name: presumptive ectoderm namespace: zebrafish_anatomy alt_id: ZFA:0000147 def: "Presumptive structure at the animal poll of the blastula that will develop into ectoderm via the epiblast. Determined by fate mapping." [ZFIN:ZDB-PUB-961014-608] synonym: "presumptive epidermis" EXACT [] xref: TAO:0001376 xref: ZFIN:ZDB-ANAT-060131-50 is_a: ZFA:0001116 ! presumptive structure relationship: end ZFS:0000019 ! Gastrula:Shield relationship: start ZFS:0000014 ! Blastula:Sphere [Term] id: ZFA:0001377 name: presumptive mesoderm namespace: zebrafish_anatomy xref: TAO:0001377 xref: ZFIN:ZDB-ANAT-060131-51 is_a: ZFA:0001116 ! presumptive structure relationship: end ZFS:0000021 ! Gastrula:90%-epiboly relationship: start ZFS:0000014 ! Blastula:Sphere [Term] id: ZFA:0001378 name: axial hypoblast namespace: zebrafish_anatomy xref: TAO:0001378 xref: ZFIN:ZDB-ANAT-060131-52 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000071 ! shield relationship: end ZFS:0000022 ! Gastrula:Bud relationship: part_of ZFA:0000117 ! hypoblast relationship: start ZFS:0000020 ! Gastrula:75%-epiboly [Term] id: ZFA:0001379 name: pharyngeal ectoderm namespace: zebrafish_anatomy xref: TAO:0001379 xref: ZFIN:ZDB-ANAT-060131-53 is_a: ZFA:0000016 ! ectoderm relationship: end ZFS:0000027 ! Segmentation:20-25 somites relationship: part_of ZFA:0000056 ! pharynx relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001381 name: hypohyal bone namespace: zebrafish_anatomy def: "Hypohyals are the most anterior of the bilaterally paired ventral hyoid arch elements. The two hypohyals in zebrafish ossify at the anterodorsal and anteroventral tips of the ceratohyal cartilages; no separate hypohyal cartilages are present." [ZFIN:curator] synonym: "hypohyals" EXACT PLURAL [] xref: TAO:0001381 xref: ZFIN:ZDB-ANAT-060331-15 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001400 ! ceratohyal cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001402 ! ventral hyoid arch relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001382 name: epibranchial uncinate process namespace: zebrafish_anatomy def: "Epibranchials 1-3 in adults are compound elements formed by the fusion of epibranchial cartilages and the so-called uncinate processes. Posteromedially directed uncinate processes develop on the posterior edge of epibranchials 1-3. These appear as separate centers of chondrification (6.2 mm) that later fuse laterally to the posterior edges of the epibranchial cartilages (6.8 mm)." [ZFIN:curator] synonym: "epibranchial uncinate processes" EXACT PLURAL [] xref: TAO:0001382 xref: ZFIN:ZDB-ANAT-060331-16 is_a: ZFA:0001591 ! endochondral bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000658 ! epibranchial bone relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001383 name: fin bud namespace: zebrafish_anatomy synonym: "fin buds" EXACT PLURAL [] xref: TAO:0001383 xref: ZFIN:ZDB-ANAT-060131-54 is_a: ZFA:0000292 ! surface structure is_a: ZFA:0001105 ! embryonic structure relationship: end ZFS:0000033 ! Hatching:Long-pec relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001384 name: pelvic fin bud namespace: zebrafish_anatomy synonym: "pelvic fin buds" EXACT PLURAL [] xref: TAO:0001384 xref: ZFIN:ZDB-ANAT-060131-55 is_a: ZFA:0001383 ! fin bud relationship: develops_from ZFA:0001454 ! pelvic fin field relationship: end ZFS:0000030 ! Pharyngula:Prim-15 relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001385 name: apical ectodermal ridge pelvic fin bud namespace: zebrafish_anatomy def: "Apical ectodermal ridge that is part of the pelvic fin bud." [ZFIN:curator] synonym: "apical ectodermal ridge pelvic fin buds" EXACT PLURAL [] xref: TAO:0001385 xref: ZFIN:ZDB-ANAT-060131-56 is_a: ZFA:0001702 ! apical ectodermal ridge relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0001384 ! pelvic fin bud relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0001386 name: mesoderm pelvic fin bud namespace: zebrafish_anatomy synonym: "mesoderm pelvic fin buds" EXACT PLURAL [] xref: TAO:0001386 xref: ZFIN:ZDB-ANAT-060131-57 is_a: ZFA:0000041 ! mesoderm relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0001384 ! pelvic fin bud relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0001387 name: pelvic fin skeleton namespace: zebrafish_anatomy xref: TAO:0001387 xref: ZFIN:ZDB-ANAT-060131-58 is_a: ZFA:0000027 ! paired fin skeleton relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001184 ! pelvic fin relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001388 name: epithelial mesenchymal boundary namespace: zebrafish_anatomy synonym: "epithelial mesenchymal boundarys" EXACT PLURAL [] xref: TAO:0001388 xref: ZFIN:ZDB-ANAT-060131-59 is_a: ZFA:0001689 ! anatomical line relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001269 ! regenerating fin relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001389 name: regeneration epithelium namespace: zebrafish_anatomy synonym: "epidermal cap" EXACT [] synonym: "wound epidermis" EXACT [] synonym: "wound epithelium" EXACT [] xref: TAO:0001389 xref: ZFIN:ZDB-ANAT-060131-60 is_a: ZFA:0001486 ! epithelium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001269 ! regenerating fin relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001390 name: pancreatic bud namespace: zebrafish_anatomy synonym: "pancreatic buds" EXACT PLURAL [] xref: TAO:0001390 xref: ZFIN:ZDB-ANAT-060131-61 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0000254 ! pancreas primordium relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001371 ! pancreatic system relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001391 name: anterior lateral line ganglion namespace: zebrafish_anatomy def: "The anterior lateral line ganglia develops from cranial ectodermal placodes and contain sensory neurons that innervate the anterior lateral line system." [ZFIN:curator] synonym: "anterior lateral line ganglia" EXACT PLURAL [] xref: TAO:0001391 xref: ZFIN:ZDB-ANAT-060131-62 is_a: ZFA:0000120 ! lateral line ganglion relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001392 name: parapophysis 1 namespace: zebrafish_anatomy def: "Lateral projections from the first centrum in cyprinids, absent in catostomids, and absent in characiphysans (Fink and Fink, 1996)." [ZFIN:curator] synonym: "basipophysis 1" EXACT [] synonym: "lateral process 1" EXACT [] xref: TAO:0001392 xref: ZFIN:ZDB-ANAT-060331-17 is_a: ZFA:0001362 ! parapophysis relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001167 ! vertebra 1 relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001393 name: parapophysis 2 namespace: zebrafish_anatomy def: "Lateral projection from the second centrum, absent in Siluriformes (Fink and Fink, 1996)." [ZFIN:curator] synonym: "basipophysis" EXACT [] synonym: "lateral process 2" EXACT [] xref: TAO:0001393 xref: ZFIN:ZDB-ANAT-060331-18 is_a: ZFA:0001362 ! parapophysis relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001168 ! vertebra 2 relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001394 name: neural arch 3 namespace: zebrafish_anatomy def: "Neural arch 3 is expanded and fused to supraneural 3 as part of a neural complex roofing and protecting the neural canal." [ZFIN:curator] xref: TAO:0001394 xref: ZFIN:ZDB-ANAT-060331-19 is_a: ZFA:0001066 ! neural arch relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001169 ! vertebra 3 relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001395 name: neural arch 4 namespace: zebrafish_anatomy def: "Neural arch 4 is expanded and fused to supraneural 3 as part of the neural complex. A reduced neural spine projects from the posterior margin of the neural complex." [ZFIN:curator] xref: TAO:0001395 xref: ZFIN:ZDB-ANAT-060331-20 is_a: ZFA:0001066 ! neural arch relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001170 ! vertebra 4 relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001396 name: parapophysis/rib namespace: zebrafish_anatomy def: "The parapophysis + rib, fused to the centrum, extends laterally then angles anteroventrally. A thin plate, the os suspensorium fuses to its median surface." [ZFIN:curator] xref: TAO:0001396 xref: ZFIN:ZDB-ANAT-060331-21 is_a: ZFA:0001591 ! endochondral bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001170 ! vertebra 4 relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001397 name: post-Weberian supraneural namespace: zebrafish_anatomy def: "Posterior to the Weberian apparatus, otophysan supraneurals form as median, unpaired, rod- or platelike elements, as in other actinopterygians." [ZFIN:curator] synonym: "post-Weberian supraneurals" EXACT PLURAL [] xref: TAO:0001397 xref: ZFIN:ZDB-ANAT-060331-22 is_a: ZFA:0000442 ! supraneural relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000040 ! Larval:Days 14-20 [Term] id: ZFA:0001399 name: palatoquadrate cartilage namespace: zebrafish_anatomy synonym: "dorsal mandibular cartilage" EXACT [] synonym: "pterygoquadrate" EXACT [] synonym: "quadrate cartilage" EXACT [] xref: TAO:0001399 xref: ZFIN:ZDB-ANAT-060331-24 is_a: ZFA:0001460 ! pharyngeal arch cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001272 ! palatoquadrate arch relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0001400 name: ceratohyal cartilage namespace: zebrafish_anatomy def: "Pharyngeal arch cartilage that is bilaterally paired and the largest cartilaginous component of the ventral hyoid arch." [ZFIN:curator] xref: TAO:0001400 xref: ZFIN:ZDB-ANAT-060331-25 is_a: ZFA:0001460 ! pharyngeal arch cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001402 ! ventral hyoid arch relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0001401 name: dorsal hyoid arch namespace: zebrafish_anatomy synonym: "dorsal visceral arch 2" EXACT [] xref: TAO:0001401 xref: ZFIN:ZDB-ANAT-060331-26 is_a: ZFA:0001478 ! anatomical cluster relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000444 ! suspensorium relationship: part_of ZFA:0001276 ! pharyngeal arch 2 skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001402 name: ventral hyoid arch namespace: zebrafish_anatomy synonym: "ventral visceral arch 2" EXACT [] xref: TAO:0001402 xref: ZFIN:ZDB-ANAT-060331-27 is_a: ZFA:0001478 ! anatomical cluster relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001276 ! pharyngeal arch 2 skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001403 name: supraethmoid namespace: zebrafish_anatomy def: "Dermal bone that first appears as paired ossifications in the membrane (dermis) dorsolateral to the ethmoid cartilage and anterolateral to the lateral ethmoids, later having the appearance of one butterfly-shaped element. Fused to the anterodorsal margin of the mesethmoid. Bordered anteriorly by the kinethmoid and posteriorly by the frontal." [ZFIN:curator] synonym: "supra-ethmoid" RELATED [] xref: TAO:0001403 xref: ZFIN:ZDB-ANAT-060331-28 is_a: ZFA:0001590 ! dermal bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000351 ! olfactory region relationship: part_of ZFA:0000863 ! dermatocranium relationship: start ZFS:0000041 ! Larval:Days 21-29 [Term] id: ZFA:0001404 name: preethmoid bone namespace: zebrafish_anatomy def: "Small rounded to egg-shaped cartilage bone that sits in an anterolateral depression on the prevomer. Articulates with the autopalatine in all cypriniforms." [ZFIN:curator] synonym: "pre-ethmoid" EXACT [] synonym: "preethmoid bones" EXACT PLURAL [] xref: TAO:0001404 xref: ZFIN:ZDB-ANAT-060331-29 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001405 ! ethmoid cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000351 ! olfactory region relationship: part_of ZFA:0001424 ! chondrocranium relationship: start ZFS:0000043 ! Juvenile:Days 45-89 [Term] id: ZFA:0001405 name: ethmoid cartilage namespace: zebrafish_anatomy def: "Bilaterally paired neurocranium cartilage which is initially plate-like and formed from the anterior fusion between the bilaterally paired trabecula cranii. It grows dorsally between the laminae orbitonasales to attain a complex shape." [ZFIN:curator] synonym: "ethmoid plate" EXACT [] xref: TAO:0001405 xref: ZFIN:ZDB-ANAT-060331-30 is_a: ZFA:0001461 ! chondrocranium cartilage relationship: end ZFS:0000042 ! Juvenile:Days 30-44 relationship: part_of ZFA:0000351 ! olfactory region relationship: part_of ZFA:0001580 ! neurocranium relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0001406 name: kinethmoid bone namespace: zebrafish_anatomy def: "Small median unpaired dermal sesamoid bone in the premaxillary-ethmoid ligament between the mesethmoid and the premaxilla that enhances the protractability of the upper jaw. It forms in the premaxillary-ethmoid ligament. The kinethmoid arose de novo in the ancestor of Cypriniformes, the only group within Ostariophysi, in which it is found (Fink and Fink, 1981)." [ZFIN:curator] xref: TAO:0001406 xref: ZFIN:ZDB-ANAT-060331-31 is_a: ZFA:0001590 ! dermal bone relationship: develops_from ZFA:0000585 ! kinethmoid cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000351 ! olfactory region relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001424 ! chondrocranium relationship: start ZFS:0000041 ! Larval:Days 21-29 [Term] id: ZFA:0001407 name: infraorbital 2 namespace: zebrafish_anatomy def: "Plate like dermal bone, variable in size, though usually one of the smallest in the series. Bears 2-3 neuromast pores enclosed within the infraorbital canal (Nelson, 1969)." [ZFIN:curator] xref: TAO:0001407 xref: ZFIN:ZDB-ANAT-060331-32 is_a: ZFA:0000376 ! infraorbital relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001649 ! infraorbital series relationship: start ZFS:0000042 ! Juvenile:Days 30-44 [Term] id: ZFA:0001408 name: infraorbital 3 namespace: zebrafish_anatomy def: "Plate like dermal bone, variable in size, but usually largest in the series. Usually fused with IO4 (eg. Opsariichthys, Nelson (1969)). Usually bears 3 neuromast pores enclosed within the infraorbital canal (Nelson, 1969)." [ZFIN:curator] xref: TAO:0001408 xref: ZFIN:ZDB-ANAT-060331-33 is_a: ZFA:0000376 ! infraorbital relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001649 ! infraorbital series relationship: start ZFS:0000042 ! Juvenile:Days 30-44 [Term] id: ZFA:0001409 name: infraorbital 4 namespace: zebrafish_anatomy def: "Plate like dermal bone. Usually fused with infraorbital 3." [ZFIN:curator] xref: TAO:0001409 xref: ZFIN:ZDB-ANAT-060331-34 is_a: ZFA:0000376 ! infraorbital relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001649 ! infraorbital series relationship: start ZFS:0000042 ! Juvenile:Days 30-44 [Term] id: ZFA:0001410 name: orbital region namespace: zebrafish_anatomy def: "Anatomical cluster that is a anterolateral part of the cranium and structurally supports the eye." [ZFIN:curator] xref: TAO:0001410 xref: ZFIN:ZDB-ANAT-060331-35 is_a: ZFA:0001478 ! anatomical cluster relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000737 ! cranium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001411 name: sclerotic bone namespace: zebrafish_anatomy def: "A pair of small dish-shaped bones that cap the anterior and posterior margin of the eyeball. The sclerotic bones also called scleral ossicles form from the scleral cartilage between the sclera and the optic choroid. The ossicles develop via unilateral perichondral ossification of the scleral cartilage from two centers opposite one another in the eye." [ZFIN:curator, ZFIN:ZDB-PUB-070629-20] synonym: "scleral ossicle" EXACT [] synonym: "sclerotic bones" EXACT PLURAL [] xref: TAO:0001411 xref: ZFIN:ZDB-ANAT-060331-36 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001509 ! sclerotic cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001410 ! orbital region relationship: part_of ZFA:0001424 ! chondrocranium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001412 name: epiotic namespace: zebrafish_anatomy alt_id: ZFA:0000659 def: "Cartilage bone that contacts the pterotic anteriorly, the supraoccipital and parietal dorsally, and the exoccipital ventrally. The epiotic enclose the posterior semicircular canal of the inner ear and contribute to the hind margin of the cranium." [ZFIN:curator] synonym: "epioccipital" EXACT [] xref: TAO:0001412 xref: ZFIN:ZDB-ANAT-060331-37 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001500 ! auditory capsule relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000189 ! otic region relationship: part_of ZFA:0001424 ! chondrocranium relationship: part_of ZFA:0001580 ! neurocranium relationship: start ZFS:0000041 ! Larval:Days 21-29 [Term] id: ZFA:0001414 name: occipital region namespace: zebrafish_anatomy def: "Anatomical cluster that is located in the posterior region of the cranium and forms the margin of the foramen magnum and occiptal condyle." [ZFIN:curator] synonym: "basicranial region" EXACT [] xref: TAO:0001414 xref: ZFIN:ZDB-ANAT-060331-39 is_a: ZFA:0001478 ! anatomical cluster relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000737 ! cranium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001415 name: pelvic radial 2 namespace: zebrafish_anatomy synonym: "pelvic radials 2" EXACT PLURAL [] xref: TAO:0001415 xref: ZFIN:ZDB-ANAT-060331-40 is_a: ZFA:0000508 ! pelvic radial relationship: develops_from ZFA:0001541 ! pelvic radial 2 cartilage relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001416 name: pelvic radial 3 namespace: zebrafish_anatomy synonym: "pelvic radials 3" EXACT PLURAL [] xref: TAO:0001416 xref: ZFIN:ZDB-ANAT-060331-41 is_a: ZFA:0000508 ! pelvic radial relationship: develops_from ZFA:0001540 ! pelvic radial 3 cartilage relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001417 name: pelvic radial 1 namespace: zebrafish_anatomy synonym: "pelvic radials 1" EXACT PLURAL [] xref: TAO:0001417 xref: ZFIN:ZDB-ANAT-060331-42 is_a: ZFA:0000508 ! pelvic radial relationship: develops_from ZFA:0001542 ! pelvic radial 1 cartilage relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001418 name: dorsal fin lepidotrichium namespace: zebrafish_anatomy def: "Lepidotrichium which is part of the dorsal fin." [ZFIN:curator] synonym: "dorsal fin lepidotrichia" EXACT PLURAL [] synonym: "dorsal fin ray" EXACT [] xref: TAO:0001418 xref: ZFIN:ZDB-ANAT-060331-43 is_a: ZFA:0001554 ! lepidotrichium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001124 ! dorsal fin skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001419 name: dorsal fin pterygiophore namespace: zebrafish_anatomy def: "A range of seven to nine rod-like internal median skeletal support structures of the dorsal fin, comprised of both bone and cartilage and found between vertebrae 11 and 18." [ZFIN:ZDB-PUB-031103-13] synonym: "dorsal fin support" EXACT [] xref: TAO:0001419 xref: ZFIN:ZDB-ANAT-060331-44 is_a: ZFA:0001478 ! anatomical cluster relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001124 ! dorsal fin skeleton relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0001420 name: anal fin pterygiophore namespace: zebrafish_anatomy def: "A range of twelve to fourteen rod-like internal median skeletal support structures of the anal fin, comprised of both bone and cartilage and found between vertebrae 14 and 21." [ZFIN:curator] synonym: "anal fin radial" RELATED [] xref: TAO:0001420 xref: ZFIN:ZDB-ANAT-060331-45 is_a: ZFA:0001478 ! anatomical cluster relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000167 ! anal fin skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001421 name: anal fin lepidotrichium namespace: zebrafish_anatomy def: "Lepidotrichium which is part of the anal fin." [ZFIN:curator] synonym: "anal fin lepidotrichia" EXACT PLURAL [] synonym: "anal fin ray" EXACT [] xref: TAO:0001421 xref: ZFIN:ZDB-ANAT-060331-46 is_a: ZFA:0001554 ! lepidotrichium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000167 ! anal fin skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001422 name: hyosymplectic cartilage namespace: zebrafish_anatomy def: "Bilaterally paired large cartilage that articulates with the chondrocranium dorsally, the opercle posteriorly, and the palatoquadrate cartilage anteriorly." [ZFIN:curator] synonym: "hyomandibular cartilage" EXACT [] xref: TAO:0001422 xref: ZFIN:ZDB-ANAT-060331-47 is_a: ZFA:0001460 ! pharyngeal arch cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001401 ! dorsal hyoid arch relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0001423 name: parachordal cartilage namespace: zebrafish_anatomy def: "Rod-shaped paired cartilages on either side of the notochord. They unite, forming the base of the chondrocranium and are replaced by the prootic bones." [ZFIN:curator] synonym: "parachordal cartilages" EXACT PLURAL [] xref: TAO:0001423 xref: ZFIN:ZDB-ANAT-060331-48 is_a: ZFA:0001461 ! chondrocranium cartilage relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0000189 ! otic region relationship: part_of ZFA:0001414 ! occipital region relationship: part_of ZFA:0001580 ! neurocranium relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0001424 name: chondrocranium namespace: zebrafish_anatomy alt_id: ZFA:0000377 def: "Anatomical cluster that is part of the cranium and composed of cartilage and cartilage replacement bones." [ZFIN:curator] synonym: "chondocranium" EXACT [] synonym: "neurocranium" RELATED [] xref: TAO:0001424 xref: ZFIN:ZDB-ANAT-060331-49 is_a: ZFA:0001478 ! anatomical cluster relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000737 ! cranium relationship: start ZFS:0000032 ! Pharyngula:High-pec [Term] id: ZFA:0001425 name: basal plate cartilage namespace: zebrafish_anatomy synonym: "basal plate cartilages" EXACT PLURAL [] xref: TAO:0001425 xref: ZFIN:ZDB-ANAT-060331-50 is_a: ZFA:0001461 ! chondrocranium cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001423 ! parachordal cartilage relationship: part_of ZFA:0001580 ! neurocranium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001426 name: posterior naris namespace: zebrafish_anatomy synonym: "posterior nares" EXACT PLURAL [] xref: TAO:0001426 xref: ZFIN:ZDB-ANAT-060331-51 is_a: ZFA:0000550 ! naris relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0001427 name: anterior naris namespace: zebrafish_anatomy synonym: "anterior nares" EXACT PLURAL [] xref: TAO:0001427 xref: ZFIN:ZDB-ANAT-060331-52 is_a: ZFA:0000550 ! naris relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0001428 name: olfactory rosette namespace: zebrafish_anatomy def: "The highly folded olfactory epithelium" [ISBN:9789812388216] synonym: "olfactory rosettes" EXACT PLURAL [] xref: TAO:0001428 xref: ZFIN:ZDB-ANAT-060331-53 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000047 ! peripheral olfactory organ relationship: start ZFS:0000035 ! Larval:Protruding-mouth [Term] id: ZFA:0001429 name: raphe nucleus namespace: zebrafish_anatomy xref: TAO:0001429 xref: ZFIN:ZDB-ANAT-060331-54 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000241 ! midline column relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001430 name: pneumatic duct namespace: zebrafish_anatomy def: "A duct connecting the esophagus to the posterior chamber of the swim bladder." [ZFIN:ZDB-PUB-060306-11] xref: TAO:0001430 xref: ZFIN:ZDB-ANAT-060816-5 is_a: ZFA:0005171 ! duct relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000204 ! esophagus relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0001431 name: primitive olfactory epithelium namespace: zebrafish_anatomy xref: TAO:0001431 xref: ZFIN:ZDB-ANAT-060331-55 is_a: ZFA:0001486 ! epithelium relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0000048 ! olfactory placode relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001432 name: anterior sclerotic bone namespace: zebrafish_anatomy def: "Sclerotic bone that is located anterior to the eye." [ZFIN:curator] synonym: "anterior sclerotic bones" EXACT PLURAL [] xref: TAO:0001432 xref: ZFIN:ZDB-ANAT-060331-56 is_a: ZFA:0001411 ! sclerotic bone relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001433 name: posterior sclerotic bone namespace: zebrafish_anatomy def: "Sclerotic bone that is located posterior to the eye." [ZFIN:curator] synonym: "posterior sclerotic bones" EXACT PLURAL [] xref: TAO:0001433 xref: ZFIN:ZDB-ANAT-060331-57 is_a: ZFA:0001411 ! sclerotic bone relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001434 name: floor plate neural tube namespace: zebrafish_anatomy def: "Floor plate that is part of the neural tube." [ZFIN:curator] xref: TAO:0001434 xref: ZFIN:ZDB-ANAT-060331-58 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0000887 ! floor plate neural rod relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0000022 ! floor plate relationship: part_of ZFA:0001135 ! neural tube relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0001435 name: lateral wall neural tube namespace: zebrafish_anatomy def: "Portion of tissue on the side of the lumen of the neural tube." [ZFIN:curator] xref: TAO:0001435 xref: ZFIN:ZDB-ANAT-060331-59 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0001135 ! neural tube relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0001436 name: roof plate neural tube region namespace: zebrafish_anatomy xref: TAO:0001436 xref: ZFIN:ZDB-ANAT-060331-60 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0001135 ! neural tube relationship: part_of ZFA:0007058 ! roof plate relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0001437 name: ductus communicans namespace: zebrafish_anatomy def: "The constriction between the anterior and posterior chambers of the swim bladder. There does not appear to be an identifiable sphincter in the ductus, and therefore other musculature may regulate its opening." [ZFIN:ZDB-PUB-060306-11] xref: TAO:0001437 xref: ZFIN:ZDB-ANAT-060816-6 is_a: ZFA:0005171 ! duct relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000076 ! swim bladder relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001438 name: coelom namespace: zebrafish_anatomy synonym: "body cavity" EXACT [] xref: TAO:0001438 xref: ZFIN:ZDB-ANAT-060816-7 is_a: ZFA:0001643 ! anatomical space relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001115 ! trunk relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001439 name: anatomical system namespace: zebrafish_anatomy def: "Anatomical group that has as its parts distinct anatomical structures interconnected by anatomical structures at a lower level of granularity." [ZFIN:curator] synonym: "anatomical systems" EXACT PLURAL [] xref: CARO:0000011 xref: TAO:0001439 xref: ZFIN:ZDB-ANAT-060816-8 is_a: ZFA:0001512 ! anatomical group relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001094 ! whole organism relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001440 name: rhombic lip namespace: zebrafish_anatomy def: "The interface between the dorsal neuroepithelium and the roof plate of the fourth ventricle. The source of a number of migratory neuron populations of the hindbrain." [ZFIN:curator] xref: TAO:0001440 xref: ZFIN:ZDB-ANAT-060816-9 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000028 ! Segmentation:26+ somites relationship: part_of ZFA:0000029 ! hindbrain relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001441 name: lower rhombic lip namespace: zebrafish_anatomy def: "Posterior portion of the rhombic lip contained within rhombomeres 2-8. Gives rise to several brainstem nuclei and choroid plexus." [ZFIN:curator] xref: TAO:0001441 xref: ZFIN:ZDB-ANAT-060816-10 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000028 ! Segmentation:26+ somites relationship: part_of ZFA:0000069 ! rhombomere 6 relationship: part_of ZFA:0000153 ! rhombomere 8 relationship: part_of ZFA:0000822 ! rhombomere 2 relationship: part_of ZFA:0000823 ! rhombomere 5 relationship: part_of ZFA:0000948 ! rhombomere 3 relationship: part_of ZFA:0000949 ! rhombomere 7 relationship: part_of ZFA:0001032 ! rhombomere 4 relationship: part_of ZFA:0001440 ! rhombic lip relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001442 name: upper rhombic lip namespace: zebrafish_anatomy def: "Anterior-most region of dorsal hindbrain within rhombomere 1, adjacent the midbrain-hindbrain boundary." [ZFIN:curator] synonym: "cerebellar anlage" EXACT [] synonym: "presumptive cerebellum" EXACT [] xref: TAO:0001442 xref: ZFIN:ZDB-ANAT-060816-11 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000028 ! Segmentation:26+ somites relationship: part_of ZFA:0001031 ! rhombomere 1 relationship: part_of ZFA:0001440 ! rhombic lip relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001443 name: choroid plexus namespace: zebrafish_anatomy def: "A tuft of capillaries that project into the ventricles of the brain and secretes cerebral spinal fluid. The choroid plexus is covered by a cuboidal epithelium which maintains the integrity of the blood-brain barrier." [ZFIN:curator] xref: TAO:0001443 xref: ZFIN:ZDB-ANAT-060816-12 is_a: ZFA:0000099 ! brain vasculature relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000008 ! brain relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001444 name: choroid plexus third ventricle namespace: zebrafish_anatomy def: "Choroid plexus that is part of the third ventricle." [ZFIN:curator] synonym: "diencephalic choroid plexus " EXACT [] xref: TAO:0001444 xref: ZFIN:ZDB-ANAT-060816-13 is_a: ZFA:0001443 ! choroid plexus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000161 ! third ventricle relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001445 name: choroid plexus tectal ventricle namespace: zebrafish_anatomy def: "Choroid plexus that is part of the tectal ventricle." [ZFIN:curator] synonym: "choroid plexus tectal ventricles" EXACT PLURAL [] xref: TAO:0001445 xref: ZFIN:ZDB-ANAT-060816-14 is_a: ZFA:0001443 ! choroid plexus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000159 ! tectal ventricle relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001446 name: choroid plexus fourth ventricle namespace: zebrafish_anatomy def: "Choroid plexus that is part of the fourth ventricle." [ZFIN:curator] xref: TAO:0001446 xref: ZFIN:ZDB-ANAT-060816-15 is_a: ZFA:0001443 ! choroid plexus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000110 ! fourth ventricle relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001447 name: choroid plexus telencephalic ventricle namespace: zebrafish_anatomy def: "Choroid plexus that is part of the telencephalic ventricle." [ZFIN:curator] xref: TAO:0001447 xref: ZFIN:ZDB-ANAT-060816-16 is_a: ZFA:0001443 ! choroid plexus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000696 ! telencephalic ventricle relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001448 name: ultimobranchial body namespace: zebrafish_anatomy def: "Glands that produce calcitonin. In adult fish the glands lie as two groups of follicles at the transverse septum close to the sinus venosus" [ZFIN:ZDB-PUB-060517-11] synonym: "ultimobranchial bodies" EXACT PLURAL [] xref: TAO:0001448 xref: ZFIN:ZDB-ANAT-060816-17 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001158 ! endocrine system relationship: start ZFS:0000034 ! Hatching:Pec-fin [Term] id: ZFA:0001449 name: mesenchyme pelvic fin namespace: zebrafish_anatomy synonym: "mesenchyme pelvic fins" EXACT PLURAL [] xref: TAO:0001449 xref: ZFIN:ZDB-ANAT-060816-18 is_a: ZFA:0000393 ! mesenchyme relationship: develops_from ZFA:0001386 ! mesoderm pelvic fin bud relationship: end ZFS:0000035 ! Larval:Protruding-mouth relationship: part_of ZFA:0001184 ! pelvic fin relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0001450 name: apical ectodermal ridge pelvic fin namespace: zebrafish_anatomy def: "Apical ectodermal ridge that is part of the pelvic fin." [ZFIN:curator] synonym: "apical ectodermal ridge pelvic fins" EXACT PLURAL [] xref: TAO:0001450 xref: ZFIN:ZDB-ANAT-060816-19 is_a: ZFA:0001702 ! apical ectodermal ridge relationship: develops_from ZFA:0001385 ! apical ectodermal ridge pelvic fin bud relationship: end ZFS:0000035 ! Larval:Protruding-mouth relationship: part_of ZFA:0001184 ! pelvic fin relationship: start ZFS:0000031 ! Pharyngula:Prim-25 [Term] id: ZFA:0001451 name: zone of polarizing activity pectoral fin bud namespace: zebrafish_anatomy def: "A small group of mesodermal cells located at the posterior margin of the developing fin bud. The ZPA is thought to produce retinoic acid and thereby provides positional information to the developing bud." [ZFIN:ZDB-PUB-060616-55] synonym: "ZPA" RELATED [] xref: TAO:0001451 xref: ZFIN:ZDB-ANAT-060816-20 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000030 ! Pharyngula:Prim-15 relationship: part_of ZFA:0000789 ! mesoderm pectoral fin bud relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001452 name: zone of polarizing activity pelvic fin bud namespace: zebrafish_anatomy def: "A small group of mesodermal cells located at the posterior margin of the developing fin bud. The ZPA is thought to produce retinoic acid and thereby provides positional information to the developing bud." [ZFIN:ZDB-PUB-060616-55] synonym: "ZPA" RELATED [] xref: TAO:0001452 xref: ZFIN:ZDB-ANAT-060816-21 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000030 ! Pharyngula:Prim-15 relationship: part_of ZFA:0001386 ! mesoderm pelvic fin bud relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001453 name: pectoral fin field namespace: zebrafish_anatomy synonym: "pectoral fin fields" EXACT PLURAL [] xref: TAO:0001453 xref: ZFIN:ZDB-ANAT-060816-22 is_a: ZFA:0001105 ! embryonic structure relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0005042 ! posterior lateral plate mesoderm relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0001454 name: pelvic fin field namespace: zebrafish_anatomy synonym: "pelvic fin fields" EXACT PLURAL [] xref: TAO:0001454 xref: ZFIN:ZDB-ANAT-060816-23 is_a: ZFA:0001105 ! embryonic structure relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0005042 ! posterior lateral plate mesoderm relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0001455 name: scapulocoracoid namespace: zebrafish_anatomy def: "The cartilage from which both the scapula and coracoid develop." [ZFIN:curator] synonym: "coraco-scapular cartilage" EXACT [] xref: TAO:0001455 xref: ZFIN:ZDB-ANAT-060816-24 is_a: ZFA:0000257 ! pectoral fin cartilage relationship: end ZFS:0000041 ! Larval:Days 21-29 relationship: part_of ZFA:0000407 ! pectoral girdle relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001456 name: pectoral fin endoskeletal disc namespace: zebrafish_anatomy def: "A plate-like chondrogenic condensation within the pectoral fin, which subdivides into individual radials by decomposition of extracellular matrix in the inter-radial mesenchyme (Grandel and Schulte-Merker, 1998)." [ZFIN:curator] synonym: "fin plate cartilage" EXACT [] xref: TAO:0001456 xref: ZFIN:ZDB-ANAT-060816-25 is_a: ZFA:0000257 ! pectoral fin cartilage relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000036 ! Larval:Day 4 [Term] id: ZFA:0001457 name: postcranial axial cartilage namespace: zebrafish_anatomy def: "Cartilage which is part of the axial skeleton." [ZFIN:curator] synonym: "postcranial axial cartilages" EXACT PLURAL [] xref: TAO:0001457 xref: ZFIN:ZDB-ANAT-060816-26 is_a: ZFA:0001501 ! cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000317 ! postcranial axial skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001458 name: cranial cartilage namespace: zebrafish_anatomy def: "Cartilage which is part of the cranium." [ZFIN:curator] synonym: "cranial cartilages" EXACT PLURAL [] xref: TAO:0001458 xref: ZFIN:ZDB-ANAT-060816-27 is_a: ZFA:0001501 ! cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000737 ! cranium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001459 name: pelvic fin cartilage namespace: zebrafish_anatomy def: "Cartilage which is part of the pelvic fin." [ZFIN:curator] synonym: "pelvic fin cartilages" EXACT PLURAL [] xref: TAO:0001459 xref: ZFIN:ZDB-ANAT-060816-28 is_a: ZFA:0001543 ! paired fin cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001387 ! pelvic fin skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001460 name: pharyngeal arch cartilage namespace: zebrafish_anatomy synonym: "pharyngeal arch cartilages" EXACT PLURAL [] synonym: "splanchnocranium cartilage" EXACT [] xref: TAO:0001460 xref: ZFIN:ZDB-ANAT-060816-29 is_a: ZFA:0001458 ! cranial cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001216 ! splanchnocranium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001461 name: chondrocranium cartilage namespace: zebrafish_anatomy synonym: "neurocranium cartilage" EXACT [] xref: TAO:0001461 xref: ZFIN:ZDB-ANAT-060816-30 is_a: ZFA:0001458 ! cranial cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001424 ! chondrocranium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001462 name: somite border namespace: zebrafish_anatomy synonym: "somite border cell" EXACT PLURAL [] synonym: "somite boundary" RELATED [] xref: TAO:0001462 xref: ZFIN:ZDB-ANAT-060816-31 is_a: ZFA:0001689 ! anatomical line relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0000155 ! somite relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0001463 name: melanophore stripe namespace: zebrafish_anatomy synonym: "melanophore stripes" EXACT PLURAL [] xref: TAO:0001463 xref: ZFIN:ZDB-ANAT-060816-32 is_a: ZFA:0000292 ! surface structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000368 ! integument relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001464 name: retinal outer nuclear layer namespace: zebrafish_anatomy def: "The layer within the retina where the photoreceptor cell bodies reside." [ZFIN:curator] synonym: "retinal outer nuclear layers" EXACT PLURAL [] xref: TAO:0001464 xref: ZFIN:ZDB-ANAT-061101-8 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000046 ! retinal neural layer relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001465 name: photoreceptor inner segment layer namespace: zebrafish_anatomy synonym: "photoreceptor inner segment layers" EXACT PLURAL [] xref: TAO:0001465 xref: ZFIN:ZDB-ANAT-061101-9 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000143 ! retinal photoreceptor layer relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001466 name: photoreceptor outer segment layer namespace: zebrafish_anatomy synonym: "photoreceptor outer segment layers" EXACT PLURAL [] xref: TAO:0001466 xref: ZFIN:ZDB-ANAT-061101-10 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000143 ! retinal photoreceptor layer relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001467 name: pharyngeal mesoderm namespace: zebrafish_anatomy xref: TAO:0001467 xref: ZFIN:ZDB-ANAT-061101-11 is_a: ZFA:0000041 ! mesoderm relationship: end ZFS:0000030 ! Pharyngula:Prim-15 relationship: part_of ZFA:0000056 ! pharynx relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001468 name: anterior lateral line system namespace: zebrafish_anatomy def: "The anterior lateral line system develops from cranial ectodermal placodes, situated between the eye and the ear, that give rise to both the neuromasts and the anterior lateral line sensory nerves that innervate the neuromasts. The anterior lateral line system consists of small sensory patches (neuromasts) located superficially on the skin or just under the skin in fluid-filled canals on the head of all fishes and most amphibians and are innervated by several lateral line nerves, which project to the hindbrain. The anterior lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance." [ZFIN:curator] xref: TAO:0001468 xref: ZFIN:ZDB-ANAT-061101-12 is_a: ZFA:0000034 ! lateral line system relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001469 name: lateral line namespace: zebrafish_anatomy def: "The lateral line consists of small sensory patches (neuromasts) located superficially on the skin or just under the skin in fluid-filled canals on the head and body of all fishes and most amphibians. The lateral line develops from cranial ectodermal placodes situated behind the ear and between the eye and ear." [ZFIN:curator] synonym: "lateral lines" EXACT PLURAL [] xref: TAO:0001469 xref: ZFIN:ZDB-ANAT-061101-13 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000034 ! lateral line system relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0001470 name: anterior lateral line namespace: zebrafish_anatomy def: "The anterior lateral line consists of small sensory patches (neuromasts) located superficially on the skin or just under the skin in fluid-filled canals on the head of all fishes and most amphibians. The anterior lateral line develops from cranial ectodermal placodes situated between the eye and ear." [ZFIN:curator] synonym: "anterior lateral lines" EXACT PLURAL [] xref: TAO:0001470 xref: ZFIN:ZDB-ANAT-061101-14 is_a: ZFA:0001469 ! lateral line relationship: develops_from ZFA:0005117 ! anterior lateral line primordium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001468 ! anterior lateral line system relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0001471 name: posterior lateral line system namespace: zebrafish_anatomy def: "The posterior lateral line system develops from cranial ectodermal placodes, situated behind the ear, that give rise to both the neuromasts and the posterior lateral line sensory nerves that innervate the neuromasts. The posterior lateral line system consists of small sensory patches (neuromasts) located superficially on the skin or just under the skin in fluid-filled canals on the head of all fishes and most amphibians. The neuromasts are innervated by several lateral line nerves, which project primarily to the hindbrain. The posterior mechanosensory lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance." [ZFIN:curator] xref: TAO:0001471 xref: ZFIN:ZDB-ANAT-061101-15 is_a: ZFA:0000034 ! lateral line system relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001472 name: anterior lateral line neuromast namespace: zebrafish_anatomy def: "Neuromast that is part of the anterior lateral line. (Also see Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:ZDB-PUB-961014-576] synonym: "neuromast anterior" EXACT [] xref: TAO:0001472 xref: ZFIN:ZDB-ANAT-061101-16 is_a: ZFA:0000243 ! neuromast relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001470 ! anterior lateral line relationship: start ZFS:0000032 ! Pharyngula:High-pec [Term] id: ZFA:0001473 name: deep blastomere namespace: zebrafish_anatomy def: "Cells (completely cleaved), located underneath the superficial blastomeres and internal to the marginal blastomeres." [ZFIN:ZDB-PUB-961014-576] synonym: "deep blastomeres" EXACT PLURAL [] xref: TAO:0001473 xref: ZFIN:ZDB-ANAT-061101-17 is_a: ZFA:0000093 ! blastomere relationship: end ZFS:0000015 ! Blastula:Dome relationship: start ZFS:0000007 ! Cleavage:64-cell [Term] id: ZFA:0001474 name: presumptive cardinal organ namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-061101-18 is_obsolete: true [Term] id: ZFA:0001475 name: presumptive organ namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-061101-19 is_obsolete: true [Term] id: ZFA:0001476 name: presumptive organ system namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-061101-20 is_obsolete: true [Term] id: ZFA:0001477 name: portion of tissue namespace: zebrafish_anatomy def: "Anatomical structure, that consists of similar cells and intercellular matrix, aggregated according to genetically determined spatial relationships." [ZFIN:curator] xref: CARO:0000043 xref: TAO:0001477 xref: ZFIN:ZDB-ANAT-061101-21 is_a: ZFA:0000037 ! anatomical structure relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000012 ! Blastula:High [Term] id: ZFA:0001478 name: anatomical cluster namespace: zebrafish_anatomy def: "Anatomical group that has its parts adjacent to one another." [ZFIN:curator] xref: CARO:0000041 xref: TAO:0001478 xref: ZFIN:ZDB-ANAT-061101-22 is_a: ZFA:0001512 ! anatomical group relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000012 ! Blastula:High [Term] id: ZFA:0001479 name: lateral line nerve namespace: zebrafish_anatomy def: "Cranial nerves that carry afferent and efferent fibers for the lateral line system." [ZFIN:curator] synonym: "lateral line nerves" EXACT PLURAL [] xref: TAO:0001479 xref: ZFIN:ZDB-ANAT-061101-23 is_a: ZFA:0007009 ! nerve relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000034 ! lateral line system relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001480 name: dorsal anterior lateral line nerve namespace: zebrafish_anatomy def: "Lateral line nerve that originates within the dorsal anterior lateral line ganglion and innervates the otic, supraorbital, and infraorbital neuromasts." [ZFIN:curator, ZFIN:ZDB-PUB-000523-3] synonym: "anterodorsal lateral line nerve" EXACT [] synonym: "dorsal anterior lateral line nerves" EXACT PLURAL [] xref: TAO:0001480 xref: ZFIN:ZDB-ANAT-061101-24 is_a: ZFA:0001479 ! lateral line nerve relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000425 ! anterior lateral line nerve relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001481 name: ventral anterior lateral line nerve namespace: zebrafish_anatomy def: "Lateral line nerve that originates within the ventral anterior lateral line ganglion and innervates the mandibular and opercular neuromasts." [ZFIN:curator] synonym: "anteroventral lateral line nerve" EXACT [] synonym: "ventral anterior lateral line nerves" EXACT PLURAL [] xref: TAO:0001481 xref: ZFIN:ZDB-ANAT-061101-25 is_a: ZFA:0001479 ! lateral line nerve relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000425 ! anterior lateral line nerve relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001482 name: middle lateral line nerve namespace: zebrafish_anatomy def: "Nerve fibers originating from the middle lateral line ganglion. These fibers innervate the middle lateral line." [ZFIN:curator] synonym: "middle lateral line nerves" EXACT PLURAL [] xref: TAO:0001482 xref: ZFIN:ZDB-ANAT-061101-26 is_a: ZFA:0001479 ! lateral line nerve relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000175 ! posterior lateral line nerve relationship: part_of ZFA:0005114 ! middle lateral line system relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001483 name: middle lateral line ganglion namespace: zebrafish_anatomy def: "The middle lateral line ganglion develops from a cranial ectodermal placode and contains sensory neurons that innervate the middle lateral line." [ZFIN:curator] synonym: "middle lateral line ganglia" EXACT PLURAL [] xref: TAO:0001483 xref: ZFIN:ZDB-ANAT-061101-27 is_a: ZFA:0000120 ! lateral line ganglion relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005114 ! middle lateral line system relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001484 name: superficial blastomere namespace: zebrafish_anatomy def: "Cells (completely cleaved), located at the surface of the blastodisc, above the deep blastomeres." [ZFIN:ZDB-PUB-961014-576] synonym: "superficial blastomeres" EXACT PLURAL [] xref: TAO:0001484 xref: ZFIN:ZDB-ANAT-061101-28 is_a: ZFA:0000093 ! blastomere relationship: end ZFS:0000015 ! Blastula:Dome relationship: start ZFS:0000007 ! Cleavage:64-cell [Term] id: ZFA:0001485 name: basal lamina namespace: zebrafish_anatomy def: "Acellular anatomical structure that consists of a thin sheet of fibrous proteins that underlie and support the cells of an epithelium. It separates the cells of an epithelium from any underlying tissue." [ZFIN:curator] synonym: "basal laminae" EXACT PLURAL [] xref: CARO:0000065 xref: TAO:0001485 xref: ZFIN:ZDB-ANAT-070517-1 is_a: ZFA:0000382 ! acellular anatomical structure relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001486 name: epithelium namespace: zebrafish_anatomy def: "Portion of tissue, that consists of one or more layers of epithelial cells connected to each other by cell junctions and which is underlain by a basal lamina." [ZFIN:curator] xref: CARO:0000066 xref: TAO:0001486 xref: ZFIN:ZDB-ANAT-070517-2 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001487 name: portion of organism substance namespace: zebrafish_anatomy def: "Material anatomical entity in a gaseous, liquid, semisolid or solid state; produced by anatomical structures or derived from inhaled and ingested substances that have been modified by anatomical structures as they pass through the body." [ZFIN:curator] xref: CARO:0000006 xref: TAO:0001487 xref: ZFIN:ZDB-ANAT-070517-3 is_a: ZFA:0100000 ! zebrafish anatomical entity relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001488 name: multi-tissue structure namespace: zebrafish_anatomy def: "Anatomical structure that has as its parts two or more portions of tissue of at least two different types and which through specific morphogenetic processes forms a single distinct structural unit demarcated by bona-fide boundaries from other distinct structural units of different types." [ZFIN:curator] synonym: "multi-tissue structures" EXACT PLURAL [] xref: CARO:0000055 xref: TAO:0001488 xref: ZFIN:ZDB-ANAT-070517-4 is_a: ZFA:0000037 ! anatomical structure relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001489 name: compound organ component namespace: zebrafish_anatomy def: "Multi-tissue structure that is part of a compound organ." [ZFIN:curator] synonym: "compound organ components" EXACT PLURAL [] xref: CARO:0000019 xref: TAO:0001489 xref: ZFIN:ZDB-ANAT-070517-5 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001490 name: cavitated compound organ namespace: zebrafish_anatomy def: "Compound organ that contains one or more macroscopic anatomical spaces." [ZFIN:curator] synonym: "cavitated compound organs" EXACT PLURAL [] xref: CARO:0000072 xref: TAO:0001490 xref: ZFIN:ZDB-ANAT-070517-6 is_a: ZFA:0000496 ! compound organ relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001491 name: solid compound organ namespace: zebrafish_anatomy def: "Compound organ that does not contain macroscopic anatomical spaces." [ZFIN:curator] synonym: "solid compound organs" EXACT PLURAL [] xref: CARO:0000074 xref: TAO:0001491 xref: ZFIN:ZDB-ANAT-070517-7 is_a: ZFA:0000496 ! compound organ relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001492 name: simple organ namespace: zebrafish_anatomy def: "Multi-tissue structure that is not part of a compound organ." [ZFIN:curator] synonym: "simple organs" EXACT PLURAL [] xref: CARO:0000021 xref: TAO:0001492 xref: ZFIN:ZDB-ANAT-070517-8 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001493 name: atypical epithelium namespace: zebrafish_anatomy def: "Epithelium that consists of epithelial cells not arranged in one or more layers." [ZFIN:curator] synonym: "atypical epithelia" EXACT PLURAL [] xref: CARO:0000071 xref: TAO:0001493 xref: ZFIN:ZDB-ANAT-070517-9 is_a: ZFA:0001486 ! epithelium relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001494 name: multilaminar epithelium namespace: zebrafish_anatomy def: "Epithelium that consists of more than one layer of epithelial cells." [ZFIN:curator] xref: CARO:0000069 xref: TAO:0001494 xref: ZFIN:ZDB-ANAT-070517-10 is_a: ZFA:0001486 ! epithelium relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001495 name: unilaminar epithelium namespace: zebrafish_anatomy def: "Epithelium that consists of a single layer of epithelial cells." [ZFIN:curator] synonym: "unilaminar epithelia" EXACT PLURAL [] xref: CARO:0000073 xref: TAO:0001495 xref: ZFIN:ZDB-ANAT-070517-11 is_a: ZFA:0001486 ! epithelium relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001496 name: simple columnar epithelium namespace: zebrafish_anatomy def: "Unilaminar epithelium that consists of a single layer of columnar cells." [ZFIN:curator] synonym: "simple columnar epithelia" EXACT PLURAL [] xref: CARO:0000068 xref: TAO:0001496 xref: ZFIN:ZDB-ANAT-070517-12 is_a: ZFA:0001495 ! unilaminar epithelium relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001497 name: simple cuboidal epithelium namespace: zebrafish_anatomy def: "Unilaminar epithelium that consists of a single layer of cuboidal cells." [ZFIN:curator] synonym: "simple cuboidal epithelia" EXACT PLURAL [] xref: CARO:0000067 xref: TAO:0001497 xref: ZFIN:ZDB-ANAT-070517-13 is_a: ZFA:0001495 ! unilaminar epithelium relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001498 name: simple squamous epithelium namespace: zebrafish_anatomy def: "Unilaminar epithelium that consists of a single layer of squamous cells." [ZFIN:curator] synonym: "simple squamous epithelia" EXACT PLURAL [] xref: CARO:0000070 xref: TAO:0001498 xref: ZFIN:ZDB-ANAT-070517-14 is_a: ZFA:0001495 ! unilaminar epithelium relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001499 name: esophageal epithelium namespace: zebrafish_anatomy def: "Simple columnar epithelium that lines the esophagus." [ZFIN:ZDB-PUB-070426-1] xref: TAO:0001499 xref: ZFIN:ZDB-ANAT-070517-15 is_a: ZFA:0001496 ! simple columnar epithelium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000204 ! esophagus relationship: part_of ZFA:0005123 ! gut epithelium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001500 name: auditory capsule namespace: zebrafish_anatomy def: "Bilaterally paired cartilage encasing the semicircular canals of the inner ear." [ZFIN:curator] synonym: "otic capsule" EXACT [] xref: TAO:0001500 xref: ZFIN:ZDB-ANAT-070517-16 is_a: ZFA:0001461 ! chondrocranium cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001580 ! neurocranium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001501 name: cartilage namespace: zebrafish_anatomy def: "Portion of tissue which is connective tissue composed of collagen and/or elastin fibers and chondrocytes. Cartilage is avascular and provides both skeletal functions and a framework upon which bone is deposited." [ZFIN:curator] synonym: "cartilages" EXACT PLURAL [] xref: TAO:0001501 xref: ZFIN:ZDB-ANAT-070517-17 is_a: ZFA:0001632 ! portion of connective tissue relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001502 name: epiphyseal bar namespace: zebrafish_anatomy def: "Bilaterally paired medial bar of cartilage formed at midorbit through medial chondrification from triangles of cartilage that later form the junction of the taeniae marginales anterior, taeniae marginales posterior and the epiphyseal bar." [ZFIN:curator] xref: TAO:0001502 xref: ZFIN:ZDB-ANAT-070517-18 is_a: ZFA:0001461 ! chondrocranium cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001580 ! neurocranium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001503 name: lamina orbitonasalis namespace: zebrafish_anatomy def: "Cranial cartilage which is bilaterally paired and develops as a dorsal plate-like projection of the anterolateral ethmoid plate, which are oriented perpendicular to the ethmoid plate. It fuses dorsally to the taenia marginalis anterior, and it joins the ethmoid cartilage medially." [ZFIN:curator] synonym: "laminas orbitonasalis" EXACT PLURAL [] xref: TAO:0001503 xref: ZFIN:ZDB-ANAT-070517-19 is_a: ZFA:0001461 ! chondrocranium cartilage relationship: end ZFS:0000039 ! Larval:Days 7-13 relationship: part_of ZFA:0001580 ! neurocranium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001504 name: occipital arch cartilage namespace: zebrafish_anatomy def: "Cranial cartilage which is a paired anterodorsal projection of the posterior end of the parachordal cartilage. It lies lateral to the notochord, just anterior to the posterior tip of the otic capsule. The bilaterally paired occipital arch cartilages fuse anterodorsally to the posterior edges of the auditory capsules and meet medially as the tectum synoticum (by 12 dpf)." [ZFIN:curator] synonym: "occipital arch cartilages" EXACT PLURAL [] xref: TAO:0001504 xref: ZFIN:ZDB-ANAT-070517-20 is_a: ZFA:0001461 ! chondrocranium cartilage relationship: end ZFS:0000038 ! Larval:Day 6 relationship: part_of ZFA:0001580 ! neurocranium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001505 name: taenia marginalis anterior namespace: zebrafish_anatomy def: "Cartilage bar (bilaterally paired) that grows anteroventrally from the epiphyseal bar to join the anterolateral edge of the ethmoid plate." [ZFIN:curator] synonym: "orbital cartilage" RELATED [] xref: TAO:0001505 xref: ZFIN:ZDB-ANAT-070517-21 is_a: ZFA:0001461 ! chondrocranium cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000290 ! sphenoid region relationship: part_of ZFA:0001580 ! neurocranium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001506 name: tectum synoticum namespace: zebrafish_anatomy def: "Unpaired thin dorsal sheet of cartilage that partially covers the posterior chondrocranium." [ZFIN:curator] xref: TAO:0001506 xref: ZFIN:ZDB-ANAT-070517-22 is_a: ZFA:0001461 ! chondrocranium cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001580 ! neurocranium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001507 name: trabecula cranii namespace: zebrafish_anatomy def: "Paired thin medially aligned bar of cartilage that extends from the anterior end of the chondrocranium to just anterior to the anterior end of the notochord. The posterior ends of the trabeculae cranii are continuous with the parachordal cartilages, and they enclose the hypophyseal fenestra." [ZFIN:curator] synonym: "trabeculae cranii" EXACT PLURAL [] xref: TAO:0001507 xref: ZFIN:ZDB-ANAT-070517-23 is_a: ZFA:0001461 ! chondrocranium cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001321 ! neurocranial trabecula relationship: part_of ZFA:0001580 ! neurocranium relationship: start ZFS:0000032 ! Pharyngula:High-pec [Term] id: ZFA:0001508 name: trabecula communis namespace: zebrafish_anatomy def: "Cartilage formed via medial fusion between bilaterally paired trabecula cranii." [ZFIN:curator] synonym: "trabecular bar" EXACT [] xref: TAO:0001508 xref: ZFIN:ZDB-ANAT-070517-24 is_a: ZFA:0001461 ! chondrocranium cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001321 ! neurocranial trabecula relationship: part_of ZFA:0001580 ! neurocranium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001509 name: sclerotic cartilage namespace: zebrafish_anatomy def: "Bilaterally paired thin continuous band of cartilage that sagitally encircles the eye. It lies between t lies between the sclera and the optic choroid." [ZFIN:ZDB-PUB-070629-20] synonym: "scleral cartilage" RELATED [] synonym: "sclerotic cartilages" EXACT PLURAL [] xref: TAO:0001509 xref: ZFIN:ZDB-ANAT-070517-25 is_a: ZFA:0001461 ! chondrocranium cartilage relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0001510 name: basihyal cartilage namespace: zebrafish_anatomy def: "Pharyngeal arch cartilage that is median and is the anterior-most cartilage of the ventral hyoid arch. It chondrifies between the anterior tips of the ceratohyal cartilages, anterior to the first copula." [ZFIN:curator] xref: TAO:0001510 xref: ZFIN:ZDB-ANAT-070517-26 is_a: ZFA:0001460 ! pharyngeal arch cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001402 ! ventral hyoid arch relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001511 name: interhyal cartilage namespace: zebrafish_anatomy alt_id: ZFA:0000218 def: "The interhyal is a small rod-like element that connects the ventral and dorsal parts of the hyoid arch. It articulates laterally with the posterior end of the epihyal and medially at the cartilaginous junction between the hyomandibula and the symplectic. It remains cartilaginous in adult zebrafish and other cypriniforms." [ZFIN:curator] synonym: "interhyal bone" EXACT [] synonym: "stylohyal" EXACT [] xref: TAO:0001511 xref: ZFIN:ZDB-ANAT-070517-27 is_a: ZFA:0001460 ! pharyngeal arch cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001402 ! ventral hyoid arch relationship: start ZFS:0000034 ! Hatching:Pec-fin [Term] id: ZFA:0001512 name: anatomical group namespace: zebrafish_anatomy alt_id: ZFA:0001255 def: "Anatomical structure consisting of at least two non-overlapping organs, multi-tissue aggregates or portion of tissues or cells of different types that does not constitute an organism, organ, multi-tissue aggregate, or portion of tissue." [ZFIN:curator] xref: CARO:0000054 xref: TAO:0001512 xref: ZFIN:ZDB-ANAT-070517-28 is_a: ZFA:0000037 ! anatomical structure relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001513 name: dermomyotome namespace: zebrafish_anatomy def: "Epithelial sheet on the external surface of the somite that gives rise to trunk, muscle and dermis." [ZFIN:curator] synonym: "dermomyotomes" EXACT PLURAL [] xref: TAO:0001513 xref: ZFIN:ZDB-ANAT-070517-29 is_a: ZFA:0001486 ! epithelium relationship: develops_from ZFA:0000155 ! somite relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001514 name: bone namespace: zebrafish_anatomy def: "Portion of tissue which is calcified connective tissue making up the structural elements of the skeletal system." [ZFIN:curator] synonym: "bones" EXACT PLURAL [] xref: TAO:0001514 xref: ZFIN:ZDB-ANAT-070928-116 is_a: ZFA:0001632 ! portion of connective tissue relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001515 name: taenia marginalis posterior namespace: zebrafish_anatomy def: "Cartilage bar (bilaterally paired) that is first visible as an anterior extension of the auditory capsule. It grows anteriorly toward the middle of the orbit where it is connected to its mate on the other side by the epiphyseal bar." [ZFIN:curator] synonym: "orbital cartilage" RELATED [] xref: TAO:0001515 xref: ZFIN:ZDB-ANAT-070928-117 is_a: ZFA:0001461 ! chondrocranium cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000290 ! sphenoid region relationship: part_of ZFA:0001580 ! neurocranium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001516 name: ceratobranchial cartilage namespace: zebrafish_anatomy def: "Pharyngeal arch cartilage that forms the largest skeletal element of the ventral branchial arches." [ZFIN:curator] synonym: "ceratobranchial cartilages" EXACT PLURAL [] xref: TAO:0001516 xref: ZFIN:ZDB-ANAT-070928-118 is_a: ZFA:0001460 ! pharyngeal arch cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0001517 name: ceratobranchial 2 cartilage namespace: zebrafish_anatomy def: "Ceratobranchial cartilage that is bilaterally paired and articulates laterally with epibranchial 2 cartilage or bone." [ZFIN:curator] xref: TAO:0001517 xref: ZFIN:ZDB-ANAT-070928-119 is_a: ZFA:0001516 ! ceratobranchial cartilage relationship: end ZFS:0000039 ! Larval:Days 7-13 relationship: part_of ZFA:0001231 ! pharyngeal arch 4 skeleton relationship: start ZFS:0000034 ! Hatching:Pec-fin [Term] id: ZFA:0001518 name: ceratobranchial 3 cartilage namespace: zebrafish_anatomy def: "Ceratobranchial cartilage that is bilaterally paired and articulates laterally with epibranchial 3 cartilage or bone." [ZFIN:curator] xref: TAO:0001518 xref: ZFIN:ZDB-ANAT-070928-120 is_a: ZFA:0001516 ! ceratobranchial cartilage relationship: end ZFS:0000039 ! Larval:Days 7-13 relationship: part_of ZFA:0001232 ! pharyngeal arch 5 skeleton relationship: start ZFS:0000034 ! Hatching:Pec-fin [Term] id: ZFA:0001519 name: ceratobranchial 4 cartilage namespace: zebrafish_anatomy def: "Ceratobranchial cartilage that is bilaterally paired and articulates laterally with epibranchial 4 cartilage or bone." [ZFIN:curator] xref: TAO:0001519 xref: ZFIN:ZDB-ANAT-070928-121 is_a: ZFA:0001516 ! ceratobranchial cartilage relationship: end ZFS:0000039 ! Larval:Days 7-13 relationship: part_of ZFA:0001230 ! pharyngeal arch 6 skeleton relationship: start ZFS:0000034 ! Hatching:Pec-fin [Term] id: ZFA:0001520 name: ceratobranchial 1 cartilage namespace: zebrafish_anatomy def: "Ceratobranchial cartilage that forms between hypobranchial 1 and epibranchial 1." [TAO:curator] xref: TAO:0001520 xref: ZFIN:ZDB-ANAT-070928-122 is_a: ZFA:0001516 ! ceratobranchial cartilage relationship: end ZFS:0000039 ! Larval:Days 7-13 relationship: part_of ZFA:0001228 ! pharyngeal arch 3 skeleton relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0001521 name: ceratobranchial 5 cartilage namespace: zebrafish_anatomy def: "Ceratobranchial cartilage that is the most posterior, bilaterally paired ventral pharyngeal arch cartilage." [ZFIN:curator] xref: TAO:0001521 xref: ZFIN:ZDB-ANAT-070928-123 is_a: ZFA:0001516 ! ceratobranchial cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001229 ! pharyngeal arch 7 skeleton relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0001522 name: hypobranchial cartilage namespace: zebrafish_anatomy def: "Small rod-like cartilage that forms between the median copulae and the ceratobranchial cartilages." [ZFIN:curator] synonym: "hypobranchial cartilages" EXACT PLURAL [] xref: TAO:0001522 xref: ZFIN:ZDB-ANAT-070928-124 is_a: ZFA:0001460 ! pharyngeal arch cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton relationship: start ZFS:0000035 ! Larval:Protruding-mouth [Term] id: ZFA:0001523 name: hypobranchial 4 cartilage namespace: zebrafish_anatomy def: "Small cartilage that forms at the anteromedial tip of ceratobranchial 4; these are not obviously present in mature specimens, due either to resorption or fusion to the cartilaginous anterior tip of ceratobranchial 4." [ZFIN:curator] synonym: "hypobranchial 4 cartilages" EXACT PLURAL [] xref: TAO:0001523 xref: ZFIN:ZDB-ANAT-070928-125 is_a: ZFA:0001522 ! hypobranchial cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001230 ! pharyngeal arch 6 skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001524 name: hypobranchial 1 cartilage namespace: zebrafish_anatomy def: "Small cartilage that forms at the anteromedial tip of ceratobranchial 1, lateral to copula 1." [ZFIN:curator] synonym: "hypobranchial 1 cartilages" EXACT PLURAL [] xref: TAO:0001524 xref: ZFIN:ZDB-ANAT-070928-126 is_a: ZFA:0001522 ! hypobranchial cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001228 ! pharyngeal arch 3 skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001525 name: hypobranchial 2 cartilage namespace: zebrafish_anatomy def: "Small cartilage that forms at the anteromedial tip of ceratobranchial 2, lateral to copula 1." [ZFIN:curator] synonym: "hypobranchial 2 cartilages" EXACT PLURAL [] xref: TAO:0001525 xref: ZFIN:ZDB-ANAT-070928-127 is_a: ZFA:0001522 ! hypobranchial cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001231 ! pharyngeal arch 4 skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001526 name: hypobranchial 3 cartilage namespace: zebrafish_anatomy def: "Small cartilage that forms at the anteromedial tip of ceratobranchial 3, lateral to copula 1." [ZFIN:curator] synonym: "hypobranchial 3 cartilages" EXACT PLURAL [] xref: TAO:0001526 xref: ZFIN:ZDB-ANAT-070928-128 is_a: ZFA:0001522 ! hypobranchial cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001232 ! pharyngeal arch 5 skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001527 name: epibranchial cartilage namespace: zebrafish_anatomy def: "Pharyngeal arch cartilage that is bilaterally paired small rod-like cartilage which articulates laterally with ceratobranchial cartilage or bone." [TAO:curator] synonym: "epibranchial cartilages" EXACT PLURAL [] xref: TAO:0001527 xref: ZFIN:ZDB-ANAT-070928-129 is_a: ZFA:0001460 ! pharyngeal arch cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001528 name: epibranchial 1 cartilage namespace: zebrafish_anatomy def: "Epibranchial cartilage that is bilaterally paired and articulates laterally with ceratobranchial 1 cartilage or bone and the medial end of pharyngobranchial 1." [ZFIN:curator] xref: TAO:0001528 xref: ZFIN:ZDB-ANAT-070928-130 is_a: ZFA:0001527 ! epibranchial cartilage relationship: end ZFS:0000040 ! Larval:Days 14-20 relationship: part_of ZFA:0001228 ! pharyngeal arch 3 skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001529 name: epibranchial 3 cartilage namespace: zebrafish_anatomy def: "Epibranchial cartilage that is bilaterally paired and articulates laterally with ceratobranchial 3 cartilage or bone and the medial end of pharyngobranchial 3." [ZFIN:curator] xref: TAO:0001529 xref: ZFIN:ZDB-ANAT-070928-131 is_a: ZFA:0001527 ! epibranchial cartilage relationship: end ZFS:0000039 ! Larval:Days 7-13 relationship: part_of ZFA:0001232 ! pharyngeal arch 5 skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001530 name: epibranchial 2 cartilage namespace: zebrafish_anatomy def: "Epibranchial cartilage that is bilaterally paired and articulates laterally with ceratobranchial 2 cartilage or bone and the medial end of pharyngobranchial 2." [ZFIN:curator] xref: TAO:0001530 xref: ZFIN:ZDB-ANAT-070928-132 is_a: ZFA:0001527 ! epibranchial cartilage relationship: end ZFS:0000040 ! Larval:Days 14-20 relationship: part_of ZFA:0001231 ! pharyngeal arch 4 skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001531 name: epibranchial 4 cartilage namespace: zebrafish_anatomy def: "Epibranchial cartilage that is bilaterally paired and articulates laterally with ceratobranchial 4 cartilage or bone and the medial end of pharyngobranchial 4." [ZFIN:curator] xref: TAO:0001531 xref: ZFIN:ZDB-ANAT-070928-133 is_a: ZFA:0001527 ! epibranchial cartilage relationship: end ZFS:0000039 ! Larval:Days 7-13 relationship: part_of ZFA:0001230 ! pharyngeal arch 6 skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001532 name: axial bone namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-070928-134 is_obsolete: true [Term] id: ZFA:0001533 name: pharyngobranchial cartilage namespace: zebrafish_anatomy def: "Paired cartilages that project medially from the medial tips of epibranchials." [ZFIN:curator] synonym: "pharyngobranchial cartilages" EXACT PLURAL [] xref: TAO:0001533 xref: ZFIN:ZDB-ANAT-070928-135 is_a: ZFA:0001460 ! pharyngeal arch cartilage relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001534 name: pharyngobranchial 3 cartilage namespace: zebrafish_anatomy def: "Paired elongate cartilages that lie posteromedial to epibranchial 2 and medial to epibranchial 3." [ZFIN:curator] synonym: "pharyngobranchial 3 cartilages" EXACT PLURAL [] xref: TAO:0001534 xref: ZFIN:ZDB-ANAT-070928-136 is_a: ZFA:0001533 ! pharyngobranchial cartilage relationship: end ZFS:0000040 ! Larval:Days 14-20 relationship: part_of ZFA:0001232 ! pharyngeal arch 5 skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001535 name: median fin cartilage namespace: zebrafish_anatomy synonym: "median fin cartilages" EXACT PLURAL [] xref: TAO:0001535 xref: ZFIN:ZDB-ANAT-070928-137 is_a: ZFA:0001457 ! postcranial axial cartilage relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001536 name: pharyngobranchial 2 cartilage namespace: zebrafish_anatomy def: "Paired disc-like cartilage lying medial to and between the medial tips of epibranchials 1 and 2." [ZFIN:curator] synonym: "pharyngobranchial 2 cartilages" EXACT PLURAL [] xref: TAO:0001536 xref: ZFIN:ZDB-ANAT-070928-138 is_a: ZFA:0001533 ! pharyngobranchial cartilage relationship: end ZFS:0000041 ! Larval:Days 21-29 relationship: part_of ZFA:0001231 ! pharyngeal arch 4 skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001537 name: mesocorocoid cartilage namespace: zebrafish_anatomy def: "Cartilage that develops initially on the medial side of the coraco-scapular cartilage." [ZFIN:curator] synonym: "mesocorocoid cartilages" EXACT PLURAL [] xref: TAO:0001537 xref: ZFIN:ZDB-ANAT-070928-139 is_a: ZFA:0000257 ! pectoral fin cartilage relationship: end ZFS:0000040 ! Larval:Days 14-20 relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001538 name: pelvic radial cartilage namespace: zebrafish_anatomy def: "Small cartilage that forms at the posterior edge of the basipterygium." [ZFIN:curator] synonym: "pelvic radial cartilages" EXACT PLURAL [] xref: TAO:0001538 xref: ZFIN:ZDB-ANAT-070928-140 is_a: ZFA:0001459 ! pelvic fin cartilage relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001539 name: basipterygium cartilage namespace: zebrafish_anatomy def: "Bilaterally paired small, rodlike cartilages on the ventral surface of the abdomen (present at 7.9 mm). Their posterior tips expand laterally, forming L-shaped cartilages. Medially, a posterior spur of cartilage develops, which will later ossify as the ischiac process (Weitzman 1962)." [ZFIN:curator] synonym: "basipterygium cartilages" EXACT PLURAL [] xref: TAO:0001539 xref: ZFIN:ZDB-ANAT-070928-141 is_a: ZFA:0001459 ! pelvic fin cartilage relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001540 name: pelvic radial 3 cartilage namespace: zebrafish_anatomy def: "Small cartilage that forms at the posterior and medial edge of the basipterygium." [ZFIN:curator] synonym: "pelvic radials 3 cartilages" EXACT PLURAL [] xref: TAO:0001540 xref: ZFIN:ZDB-ANAT-070928-142 is_a: ZFA:0001538 ! pelvic radial cartilage relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001541 name: pelvic radial 2 cartilage namespace: zebrafish_anatomy def: "Small cartilage with a long posterior process and a shorter lateral one that forms at the posterior edge of the basipterygium, between radial cartilages 1 and 2." [ZFIN:curator] synonym: "pelvic radials 2 cartilages" EXACT PLURAL [] xref: TAO:0001541 xref: ZFIN:ZDB-ANAT-070928-143 is_a: ZFA:0001538 ! pelvic radial cartilage relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001542 name: pelvic radial 1 cartilage namespace: zebrafish_anatomy def: "Small cartilage that forms at the posterior and lateral edge of the basipterygium." [ZFIN:curator] synonym: "pelvic radials 1 cartilages" EXACT PLURAL [] xref: TAO:0001542 xref: ZFIN:ZDB-ANAT-070928-144 is_a: ZFA:0001538 ! pelvic radial cartilage relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001543 name: paired fin cartilage namespace: zebrafish_anatomy def: "Cartilage which is part of one of the paired fins." [ZFIN:curator] synonym: "paired fin cartilages" EXACT PLURAL [] xref: TAO:0001543 xref: ZFIN:ZDB-ANAT-070928-145 is_a: ZFA:0001501 ! cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000027 ! paired fin skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001544 name: chondrocranium bone namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-070928-146 is_obsolete: true [Term] id: ZFA:0001545 name: cranial bone namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-070928-147 is_obsolete: true [Term] id: ZFA:0001546 name: pharyngeal arch bone namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-070928-148 is_obsolete: true [Term] id: ZFA:0001547 name: dermatocranium bone namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-070928-149 is_obsolete: true [Term] id: ZFA:0001548 name: axial fin bone namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-070928-150 is_obsolete: true [Term] id: ZFA:0001549 name: paired fin bone namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-070928-151 is_obsolete: true [Term] id: ZFA:0001550 name: caudal fin lepidotrichium namespace: zebrafish_anatomy def: "Lepidotrichium which is part of the caudal fin." [ZFIN:curator] synonym: "caudal fin lepidotrichia" EXACT PLURAL [] synonym: "caudal fin ray" EXACT [] xref: TAO:0001550 xref: ZFIN:ZDB-ANAT-070928-152 is_a: ZFA:0001554 ! lepidotrichium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000862 ! caudal fin skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001551 name: pectoral fin lepidotrichium namespace: zebrafish_anatomy def: "Lepidotrichium which is part of the pectoral fin, forming the pectoral fin skeleton and articulating with the pectoral radials. A pectoral lepidotrichium is composed of two hemitrichia that surround bundles of actinotrichia distally." [ZFIN:curator] synonym: "pectoral fin lepidotrichia" EXACT PLURAL [] synonym: "pectoral fin ray" EXACT [] xref: TAO:0001551 xref: ZFIN:ZDB-ANAT-070928-153 is_a: ZFA:0001554 ! lepidotrichium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000943 ! pectoral fin skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001552 name: pelvic fin lepidotrichium namespace: zebrafish_anatomy def: "Lepidotrichium which is part of the pelvic fin." [ZFIN:curator] synonym: "pelvic fin lepidotrichia" EXACT PLURAL [] synonym: "pelvic fin ray" EXACT [] xref: TAO:0001552 xref: ZFIN:ZDB-ANAT-070928-154 is_a: ZFA:0001554 ! lepidotrichium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001387 ! pelvic fin skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001553 name: fin bone namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-070928-155 is_obsolete: true [Term] id: ZFA:0001554 name: lepidotrichium namespace: zebrafish_anatomy def: "Dermal bone that is rod-like, formed and usually contained in a fin membrane, and jointed to or adjacent to distal radials. They are bilaterally paired. Lepidotrichia are formed from paired hemitrichia surrounding actinotrichia. There are usually two more lepidotrichia than distal radials." [ZFIN:ZDB-PUB-031103-13] synonym: "lepidotrichia" EXACT PLURAL [] xref: TAO:0001554 xref: ZFIN:ZDB-ANAT-070928-156 is_a: ZFA:0001590 ! dermal bone relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001555 name: epibranchial ganglion namespace: zebrafish_anatomy def: "Cranial ganglion which develops from an epibranchial placode." [ZFIN:curator] synonym: "epibranchial ganglia" EXACT PLURAL [] xref: TAO:0001555 xref: ZFIN:ZDB-ANAT-070928-157 is_a: ZFA:0000013 ! cranial ganglion relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001556 name: sympathetic chain ganglion namespace: zebrafish_anatomy def: "Trunk ganglion which is part of a bilaterally paired set of sympathetic ganglia located anterior and lateral to the spinal cord." [ZFIN:curator] synonym: "paravertebral ganglion" EXACT [] xref: TAO:0001556 xref: ZFIN:ZDB-ANAT-070928-158 is_a: ZFA:0001573 ! trunk ganglion relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001576 ! sympathetic nervous system relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001557 name: pronephric glomerulus namespace: zebrafish_anatomy def: "Paired highly vascularized structures of the pronephros which are fused at the midline. Responsible for blood filtration and begins to function between 40 and 48hpf." [ZFIN:ZDB-PUB-000606-4] synonym: "pronephric glomeruli" EXACT PLURAL [] xref: TAO:0001557 xref: ZFIN:ZDB-ANAT-070928-159 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000037 ! Larval:Day 5 relationship: part_of ZFA:0000151 ! pronephros relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001558 name: pronephric tubule namespace: zebrafish_anatomy def: "Bilaterally paired tubes connecting the pronephric glomeruli to the pronephric ducts. In zebrafish and other teleosts, the pronephric nephron and tubules form after the pronephric duct, connecting to the anterior-most tip of the pronephric ducts." [ZFIN:ZDB-PUB-000606-4] synonym: "ciliated neck segment" EXACT [] xref: TAO:0001558 xref: ZFIN:ZDB-ANAT-070928-160 is_a: ZFA:0005171 ! duct relationship: end ZFS:0000037 ! Larval:Day 5 relationship: part_of ZFA:0000151 ! pronephros relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001559 name: vertebral column namespace: zebrafish_anatomy xref: TAO:0001559 xref: ZFIN:ZDB-ANAT-070928-161 is_a: ZFA:0000317 ! postcranial axial skeleton relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001560 name: hypural 1 namespace: zebrafish_anatomy def: "Ventral most hypural of the caudal fin. Supports the lower lobe of the caudal fin." [ZFIN:ZDB-PUB-031103-13] xref: TAO:0001560 xref: ZFIN:ZDB-ANAT-070928-162 is_a: ZFA:0000364 ! hypural relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000036 ! Larval:Day 4 [Term] id: ZFA:0001561 name: hypural 2 namespace: zebrafish_anatomy def: "Hypural of the caudal fin dorsal to hypural 1. Supports the lower lobe of the caudal fin." [ZFIN:ZDB-PUB-031103-13] xref: TAO:0001561 xref: ZFIN:ZDB-ANAT-070928-163 is_a: ZFA:0000364 ! hypural relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000037 ! Larval:Day 5 [Term] id: ZFA:0001562 name: hypural 3 namespace: zebrafish_anatomy def: "Hypural dorsal to hypural 2 that supports the upper lobe of the caudal fin." [ZFIN:ZDB-PUB-031103-13] xref: TAO:0001562 xref: ZFIN:ZDB-ANAT-070928-164 is_a: ZFA:0000364 ! hypural relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000038 ! Larval:Day 6 [Term] id: ZFA:0001563 name: hypural 4 namespace: zebrafish_anatomy def: "Hypural dorsal to hypural 3 that supports the upper lobe of the caudal fin." [ZFIN:ZDB-PUB-031103] xref: TAO:0001563 xref: ZFIN:ZDB-ANAT-070928-165 is_a: ZFA:0000364 ! hypural relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0001564 name: hypural 5 namespace: zebrafish_anatomy def: "Dorsal-most hypural, that supports the upper lobe of the caudal fin." [ZFIN:ZDB-PUB-031103-13] xref: TAO:0001564 xref: ZFIN:ZDB-ANAT-070928-166 is_a: ZFA:0000364 ! hypural relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0001565 name: oocyte stage II namespace: zebrafish_anatomy comment: In stage II (cortical alveolus stage), oocytes are distinguished by the appearance of variably sized cortical alveoli and the vitelline envelope becomes prominent. ZDB-PUB-961014-1020 synonym: "oocytes stage II" EXACT PLURAL [] xref: TAO:0001565 xref: ZFIN:ZDB-ANAT-070928-167 is_a: ZFA:0001109 ! oocyte relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001265 ! ovarian follicle stage II relationship: start ZFS:0000043 ! Juvenile:Days 45-89 [Term] id: ZFA:0001566 name: oocyte stage III namespace: zebrafish_anatomy comment: In stage III (vitellogenesis), yolk proteins appear in oocytes and yolk bodies with crystalline yolk accrue during this major growth stage. Oocytes develop the capacity to respond in vitro to the steroid 17, 20-dihydroxy-4-pregnen-3-one (DHP) by undergoing oocyte maturation. ZDB-PUB-961014-1020 synonym: "oocytes stage III" EXACT PLURAL [] xref: TAO:0001566 xref: ZFIN:ZDB-ANAT-070928-168 is_a: ZFA:0001109 ! oocyte relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001266 ! ovarian follicle stage III relationship: start ZFS:0000043 ! Juvenile:Days 45-89 [Term] id: ZFA:0001567 name: oocyte stage I namespace: zebrafish_anatomy comment: Oocytes reside in nests with other oocytes (Stage IA) and then within a definitive follicle (Stage IB), where they greatly increase in size ZDB-PUB-961014-1020. synonym: "oocytes stage I" EXACT PLURAL [] xref: TAO:0001567 xref: ZFIN:ZDB-ANAT-070928-169 is_a: ZFA:0001109 ! oocyte relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001263 ! ovarian follicle stage I relationship: start ZFS:0000043 ! Juvenile:Days 45-89 [Term] id: ZFA:0001568 name: oocyte stage IV namespace: zebrafish_anatomy comment: In stage IV (oocyte maturation), oocytes increase slightly in size, become translucent, and their yolk becomes non-crystalline as they undergo final meiotic maturation in vivo (and in response to DHP in vitro). ZDB-PUB-961014-1020 synonym: "oocytes stage IV" EXACT PLURAL [] xref: TAO:0001568 xref: ZFIN:ZDB-ANAT-070928-170 is_a: ZFA:0001109 ! oocyte relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001264 ! ovarian follicle stage IV relationship: start ZFS:0000043 ! Juvenile:Days 45-89 [Term] id: ZFA:0001569 name: oocyte stage V namespace: zebrafish_anatomy comment: In stage V (mature egg), eggs (approx. 0.75 mm) are ovulated into the ovarian lumen and are capable of fertilization ZDB-PUB-961014-1020 synonym: "mature egg" EXACT [] synonym: "unactivated egg" EXACT [] xref: TAO:0001569 xref: ZFIN:ZDB-ANAT-070928-171 is_a: ZFA:0001109 ! oocyte relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000043 ! Juvenile:Days 45-89 [Term] id: ZFA:0001570 name: unfertilized egg namespace: zebrafish_anatomy comment: Outside the body. synonym: "activated oocyte" EXACT [] xref: TAO:0001570 xref: ZFIN:ZDB-ANAT-070928-172 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0001569 ! oocyte stage V relationship: end ZFS:0000001 ! Zygote:1-cell relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001571 name: postovulatory follicle namespace: zebrafish_anatomy synonym: "postovulatory follicles" EXACT PLURAL [] xref: TAO:0001571 xref: ZFIN:ZDB-ANAT-070928-173 is_a: ZFA:0001110 ! ovarian follicle relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000042 ! Juvenile:Days 30-44 [Term] id: ZFA:0001572 name: superior cervical ganglion namespace: zebrafish_anatomy def: "Trunk ganglion which is bilaterally paired and located at the anterior end of the sympathetic ganglion chain." [ZFIN:curator] synonym: "superior sympathetic cervical ganglion" EXACT [] xref: TAO:0001572 xref: ZFIN:ZDB-ANAT-070928-174 is_a: ZFA:0001573 ! trunk ganglion relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001576 ! sympathetic nervous system relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001573 name: trunk ganglion namespace: zebrafish_anatomy def: "Ganglion which is located in the trunk." [ZFIN:curator] synonym: "trunk ganglia" EXACT PLURAL [] xref: TAO:0001573 xref: ZFIN:ZDB-ANAT-070928-175 is_a: ZFA:0000190 ! ganglion relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001574 name: autonomic nervous system namespace: zebrafish_anatomy synonym: "ANS" EXACT [] xref: TAO:0001574 xref: ZFIN:ZDB-ANAT-070928-176 is_a: ZFA:0000396 ! nervous system relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001575 name: parasympathetic nervous system namespace: zebrafish_anatomy xref: TAO:0001575 xref: ZFIN:ZDB-ANAT-070928-177 is_a: ZFA:0001574 ! autonomic nervous system relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001576 name: sympathetic nervous system namespace: zebrafish_anatomy xref: TAO:0001576 xref: ZFIN:ZDB-ANAT-070928-178 is_a: ZFA:0001574 ! autonomic nervous system relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001577 name: premaxilla ascending process namespace: zebrafish_anatomy def: "Process of the premaxilla that extends posteriorly and overlays the mesethmoid." [ZFIN:curator] synonym: "premaxilla ascending processes" EXACT PLURAL [] xref: TAO:0001577 xref: ZFIN:ZDB-ANAT-070928-179 is_a: ZFA:0001590 ! dermal bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000567 ! premaxilla relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001578 name: anterior dorsomedial process of autopalatine namespace: zebrafish_anatomy def: "In cypriniforms the anterior portion of the palatine has a dorsomedial process which abuts against the mesethmoid. Such a process is not present in other ostariophysans or in other primitive teleosts." [ZFIN:curator] synonym: "anterior dorsomedial process of autopalatines" EXACT PLURAL [] xref: TAO:0001578 xref: ZFIN:ZDB-ANAT-070928-180 is_a: ZFA:0001591 ! endochondral bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000620 ! autopalatine relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001579 name: ural vertebra 2 namespace: zebrafish_anatomy xref: TAO:0001579 xref: ZFIN:ZDB-ANAT-071024-1 is_a: ZFA:0001189 ! vertebra relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000862 ! caudal fin skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001580 name: neurocranium namespace: zebrafish_anatomy def: "Anatomical cluster that is the regional skeletal system surrounding the brain." [ZFIN:curator] synonym: "braincase" EXACT [] xref: TAO:0001580 xref: ZFIN:ZDB-ANAT-071024-2 is_a: ZFA:0001478 ! anatomical cluster relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000737 ! cranium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001581 name: ural centrum 2 namespace: zebrafish_anatomy def: "A vertebral centrum that is located immediately posterior to ural centrum 1. Ural centrum 2 is an unpaired median bone." [TAO:curator] xref: TAO:0001581 xref: ZFIN:ZDB-ANAT-071024-3 is_a: ZFA:0001591 ! endochondral bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001579 ! ural vertebra 2 relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001582 name: non-Weberian precaudal vertebra namespace: zebrafish_anatomy synonym: "non-Weberian precaudal vertebrae" EXACT PLURAL [] xref: TAO:0001582 xref: ZFIN:ZDB-ANAT-071024-4 is_a: ZFA:0000263 ! precaudal vertebra relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001583 name: preural centrum 1+ ural centrum 1 namespace: zebrafish_anatomy def: "Vertebra which is the fused centra of preural 1 and ural 1. These elements do not develop independently in zebrafish." [ZFIN:ZDB-PUB-031103-13] xref: TAO:0001583 xref: ZFIN:ZDB-ANAT-071024-5 is_a: ZFA:0001189 ! vertebra relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000862 ! caudal fin skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001584 name: caudal fin procurrent ray namespace: zebrafish_anatomy def: "Caudal fin lepidotrichium that is located anterior to the principal caudal fin rays. Caudal procurrent rays are unbranched." [ZFIN:curator] synonym: "caudal procurrent lepidotrichium" EXACT [] synonym: "caudal procurrent ray " RELATED [] xref: TAO:0001584 xref: ZFIN:ZDB-ANAT-071024-6 is_a: ZFA:0001550 ! caudal fin lepidotrichium relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001585 name: caudal fin principal ray namespace: zebrafish_anatomy def: "Caudal fin lepidotrichium that is adjacent to a branched ray. Caudal principal rays may be segmented but unbranched and the main element forming the dorsal or ventral leading margin of the caudal fin or a ray that may be only segmented-and-branched and forms part of the middle-posterior region of the fin. A caudal principal ray is an unpaired median bone." [ZFIN:curator] synonym: "caudal principal lepidotrichium" EXACT [] synonym: "caudal principal ray" EXACT [] xref: TAO:0001585 xref: ZFIN:ZDB-ANAT-071024-7 is_a: ZFA:0001550 ! caudal fin lepidotrichium relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001586 name: pectoral fin radial namespace: zebrafish_anatomy def: "Radial which develops from the pectoral fin endoskeletal disc, supports the pectoral lepidotrichia or fin rays and connects the lepidotrichia with the primary pectoral girdle." [TAO:curator] synonym: "pectoral fin radials" EXACT PLURAL [] xref: TAO:0001586 xref: ZFIN:ZDB-ANAT-071024-8 is_a: ZFA:0000271 ! radial relationship: develops_from ZFA:0001456 ! pectoral fin endoskeletal disc relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000943 ! pectoral fin skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001587 name: pectoral fin proximal radial namespace: zebrafish_anatomy def: "Pectoral fin radial which develops from the pectoral fin endoskeletal disc, supports a few pectoral lepidotrichia or fin rays and connects the lepidotrichia and distal radials with the primary pectoral girdle (scapula and coracoid)." [TAO:curator] xref: TAO:0001587 xref: ZFIN:ZDB-ANAT-071024-9 is_a: ZFA:0001586 ! pectoral fin radial relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001588 name: pectoral fin distal radial namespace: zebrafish_anatomy def: "Pectoral fin radial, develops from the pectoral fin endoskeletal disc, and is located at the proximal region of a lepidotrichium, between its hemitrichia.Pectoral fin distal radial is paired." [TAO:curator] synonym: "pectoral fin distal radials" EXACT PLURAL [] xref: TAO:0001588 xref: ZFIN:ZDB-ANAT-071024-10 is_a: ZFA:0001586 ! pectoral fin radial relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001589 name: propterygium namespace: zebrafish_anatomy def: "The propterygium is the lateralmost or anteriormost basal cartilage that originates from the pectoral fin endoskeletal disc. The bases of the pectoral lepidotrichium 1 plus the propterygium articulates with the scapula." [TAO:Curator] synonym: "propterygia" EXACT PLURAL [] xref: TAO:0001589 xref: ZFIN:ZDB-ANAT-071024-11 is_a: ZFA:0001588 ! pectoral fin distal radial relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001590 name: dermal bone namespace: zebrafish_anatomy def: "Intramembranous bone that forms superficially in the organism." [ZFIN:curator] synonym: "dermal bones" EXACT PLURAL [] xref: TAO:0001590 xref: ZFIN:ZDB-ANAT-071024-12 is_a: ZFA:0001635 ! intramembranous bone relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001591 name: endochondral bone namespace: zebrafish_anatomy def: "Replacement bone that forms within cartilage." [ZFIN:curator] synonym: "endochondral bones" EXACT PLURAL [] xref: TAO:0001591 xref: ZFIN:ZDB-ANAT-071024-13 is_a: ZFA:0001693 ! chondral bone relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001592 name: claustrum bone namespace: zebrafish_anatomy def: "Bone that is bilaterally paired endochondral bone with extensions of membrane bone forming part of a dorsolateral protective wall around the neural canal between the back of the skull and the beginning of the neural arch series. The first Weberian ossicle. Most recently, de Pinna and Grande (2003) have proposed the claustrum is homologous to the accessory neural arch of lower teleosts." [ZFIN:curator] xref: TAO:0001592 xref: ZFIN:ZDB-ANAT-071024-14 is_a: ZFA:0000461 ! Weberian ossicle is_a: ZFA:0001591 ! endochondral bone is_a: ZFA:0001636 ! membrane bone relationship: develops_from ZFA:0000637 ! claustrum cartilage relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000040 ! Larval:Days 14-20 [Term] id: ZFA:0001593 name: quadrate ventral process namespace: zebrafish_anatomy def: "An endochondral bone that is the ventral, posteriorly-oriented bony extension of the quadrate." [ZFIN:curator] synonym: "quadrate ventral processes" EXACT PLURAL [] xref: TAO:0000224 xref: ZFIN:ZDB-ANAT-080417-72 is_a: ZFA:0001591 ! endochondral bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000621 ! quadrate relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0001594 name: preopercle horizontal limb namespace: zebrafish_anatomy def: "A dermal bone that is the lower, horizontal portion of the preopercle bone." [ZFIN:curator] synonym: "preopercle horizontal arm" EXACT [] synonym: "preopercle lower limb" EXACT [] xref: TAO:0000289 xref: ZFIN:ZDB-ANAT-080417-73 is_a: ZFA:0001590 ! dermal bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000264 ! preopercle relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001595 name: preopercle vertical limb namespace: zebrafish_anatomy def: "A dermal bone that is the upper, vertical portion of the preopercle bone." [ZFIN:curator] synonym: "preopercle upper limb" EXACT [] synonym: "preopercle vertical arm" EXACT [] xref: TAO:0000336 xref: ZFIN:ZDB-ANAT-080417-74 is_a: ZFA:0001590 ! dermal bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000264 ! preopercle relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001596 name: joint namespace: zebrafish_anatomy def: "Anatomical cluster which consists of two or more adjacent bones or cartilages, which may be interconnected by various types of tissue." [ZFIN:curator] synonym: "joints" EXACT PLURAL [] xref: TAO:0000367 xref: ZFIN:ZDB-ANAT-080417-75 is_a: ZFA:0001478 ! anatomical cluster relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001597 name: exoccipital posteroventral region namespace: zebrafish_anatomy def: "Endochondral bone which is the posteroventral region of the exoccipital bone." [ZFIN:curator] synonym: "exoccipitals posteroventral regions" EXACT PLURAL [] xref: TAO:0000348 xref: ZFIN:ZDB-ANAT-080417-76 is_a: ZFA:0001591 ! endochondral bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000661 ! exoccipital relationship: part_of ZFA:0001627 ! lagenar capsule relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0001598 name: basioccipital posterodorsal region namespace: zebrafish_anatomy def: "Endochondral bone which is the posterodorsal region of the basioccipital bone." [ZFIN:curator] xref: TAO:0000337 xref: ZFIN:ZDB-ANAT-080417-77 is_a: ZFA:0001591 ! endochondral bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000472 ! basioccipital relationship: part_of ZFA:0001627 ! lagenar capsule relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001599 name: os suspensorium medial flange namespace: zebrafish_anatomy xref: TAO:0002214 xref: ZFIN:ZDB-ANAT-080417-78 is_a: ZFA:0001591 ! endochondral bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001171 ! os suspensorium relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0001600 name: neural spine 4 namespace: zebrafish_anatomy def: "Neural spine that is located on the fourth vertebra." [ZFIN:curator] xref: TAO:0001546 xref: ZFIN:ZDB-ANAT-080417-79 is_a: ZFA:0001336 ! neural spine relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001601 name: manubrium namespace: zebrafish_anatomy synonym: "anterior process" EXACT [] synonym: "horizontal process" EXACT [] synonym: "manubrium incudus" EXACT [] xref: TAO:0001553 xref: ZFIN:ZDB-ANAT-080417-80 is_a: ZFA:0001591 ! endochondral bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000525 ! intercalarium relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0001602 name: intercalarium ascending process namespace: zebrafish_anatomy xref: TAO:0001548 xref: ZFIN:ZDB-ANAT-080417-81 is_a: ZFA:0001591 ! endochondral bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000525 ! intercalarium relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0001603 name: intercalarium articulating process namespace: zebrafish_anatomy synonym: "articular process" RELATED [] xref: TAO:0001549 xref: ZFIN:ZDB-ANAT-080417-82 is_a: ZFA:0001591 ! endochondral bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000525 ! intercalarium relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0001604 name: caudal fin upper lobe namespace: zebrafish_anatomy def: "Surface structure that is the dorsal portion of the caudal fin." [ZFIN:curator] synonym: "caudal fin dorsal lobe" EXACT [] xref: TAO:0001593 xref: ZFIN:ZDB-ANAT-080417-83 is_a: ZFA:0000292 ! surface structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001058 ! caudal fin relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001605 name: caudal fin lower lobe namespace: zebrafish_anatomy def: "Surface structure that is the ventral portion of the caudal fin." [ZFIN:curator] synonym: "caudal fin ventral lobe" EXACT [] xref: TAO:0001594 xref: ZFIN:ZDB-ANAT-080417-84 is_a: ZFA:0000292 ! surface structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001058 ! caudal fin relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001606 name: pharyngeal arch 3 namespace: zebrafish_anatomy synonym: "branchial arch 1" EXACT [] synonym: "gill arch 1" EXACT [] synonym: "visceral arch 3" EXACT [] xref: TAO:0001598 xref: ZFIN:ZDB-ANAT-080417-85 is_a: ZFA:0001613 ! pharyngeal arch 3-7 relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001607 name: pharyngeal arch 4 namespace: zebrafish_anatomy synonym: "branchial arch 2" EXACT [] synonym: "gill arch 2" EXACT [] synonym: "visceral arch 4" EXACT [] xref: TAO:0001599 xref: ZFIN:ZDB-ANAT-080417-86 is_a: ZFA:0001613 ! pharyngeal arch 3-7 relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001608 name: pharyngeal arch 5 namespace: zebrafish_anatomy synonym: "branchial arch 3" EXACT [] synonym: "gill arch 3" EXACT [] synonym: "visceral arch 5" EXACT [] xref: TAO:0001600 xref: ZFIN:ZDB-ANAT-080417-87 is_a: ZFA:0001613 ! pharyngeal arch 3-7 relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001609 name: pharyngeal arch 6 namespace: zebrafish_anatomy synonym: "branchial arch 4" EXACT [] synonym: "gill arch 4" EXACT [] synonym: "visceral arch 6" EXACT [] xref: TAO:0001601 xref: ZFIN:ZDB-ANAT-080417-88 is_a: ZFA:0001613 ! pharyngeal arch 3-7 relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001610 name: pharyngeal arch 7 namespace: zebrafish_anatomy synonym: "branchial arch 5" EXACT [] synonym: "gill arch 5" EXACT [] synonym: "visceral arch 7" EXACT [] xref: TAO:0001602 xref: ZFIN:ZDB-ANAT-080417-89 is_a: ZFA:0001613 ! pharyngeal arch 3-7 relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001611 name: pharyngeal arch 2 namespace: zebrafish_anatomy synonym: "hyoid arch" EXACT [] synonym: "pharyngeal arches 2" EXACT PLURAL [] synonym: "visceral arch 2" EXACT [] xref: TAO:0001596 xref: ZFIN:ZDB-ANAT-080417-90 is_a: ZFA:0001306 ! pharyngeal arch relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001612 name: pharyngeal arch 1 namespace: zebrafish_anatomy synonym: "mandibular arch" EXACT [] synonym: "pharyngeal arches 1" EXACT PLURAL [] synonym: "visceral arch 1" EXACT [] xref: TAO:0001595 xref: ZFIN:ZDB-ANAT-080417-91 is_a: ZFA:0001306 ! pharyngeal arch relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001613 name: pharyngeal arch 3-7 namespace: zebrafish_anatomy alt_id: ZFA:0000515 synonym: "branchial arch" EXACT [] synonym: "branchial arches" EXACT PLURAL [] synonym: "gill arch" EXACT [] synonym: "gill arches 1-5" EXACT [] synonym: "visceral arches 3-7" EXACT [] xref: TAO:0001597 xref: ZFIN:ZDB-ANAT-080417-92 is_a: ZFA:0001306 ! pharyngeal arch relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000354 ! gill relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001614 name: atrial endocardium namespace: zebrafish_anatomy def: "Endocardium that is part of the atrium." [ZFIN:curator] xref: TAO:0002169 xref: ZFIN:ZDB-ANAT-080417-93 is_a: ZFA:0001320 ! endocardium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000471 ! atrium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001615 name: ventricular endocardium namespace: zebrafish_anatomy def: "Endocardium that is part of the cardiac ventricle." [ZFIN:curator] xref: TAO:0002247 xref: ZFIN:ZDB-ANAT-080417-94 is_a: ZFA:0001320 ! endocardium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000009 ! cardiac ventricle relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001616 name: atrioventricular canal endocardium namespace: zebrafish_anatomy def: "Endocardium that is part of the atrioventricular canal." [ZFIN:curator] xref: TAO:0002170 xref: ZFIN:ZDB-ANAT-080417-95 is_a: ZFA:0001320 ! endocardium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001315 ! atrioventricular canal relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001617 name: otolith namespace: zebrafish_anatomy alt_id: ZFA:0000139 def: "Portion of organism substance composed of calcium carbonate located in the otolith organ and positioned over a sensory macula; two form in each vesicle during the late segmentation period. (Also see Anatomical Atlas entry for otolith by T. Whitfield.)" [ZFIN:ZDB-PUB-961014-576] synonym: "immature otolith" RELATED [] synonym: "immature otoliths" RELATED PLURAL [] synonym: "statolith" EXACT [] xref: TAO:0001621 xref: ZFIN:ZDB-ANAT-080417-96 is_a: ZFA:0001487 ! portion of organism substance relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000051 ! otic vesicle relationship: part_of ZFA:0000559 ! otolith organ relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0001618 name: pons namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-080417-97 is_obsolete: true [Term] id: ZFA:0001619 name: optic fiber layer namespace: zebrafish_anatomy def: "Fiber layer adjacent the retinal ganglion cell layer which is comprised of their axons as they traverse to the optic nerve." [ZFIN:ZDB-PUB-000126-5] synonym: "optic fiber layers" EXACT PLURAL [] xref: TAO:0002212 xref: ZFIN:ZDB-ANAT-080417-98 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000046 ! retinal neural layer relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0001620 name: pronephric proximal convoluted tubule namespace: zebrafish_anatomy def: "Most anterior portion of the pronephric duct (or tubule as described by Wingert et al, 2007)." [ZFIN:ZDB-PUB-071029-9] synonym: "PCT" EXACT [] xref: TAO:0002238 xref: ZFIN:ZDB-ANAT-080417-99 is_a: ZFA:0005171 ! duct relationship: end ZFS:0000037 ! Larval:Day 5 relationship: part_of ZFA:0000150 ! pronephric duct relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001621 name: pronephric proximal straight tubule namespace: zebrafish_anatomy def: "Portion of the pronephric duct (or tubule as described by Wingert et al, 2007) which is just posterior to the proximal convoluted tubule." [ZFIN:ZDB-PUB-071029-9] synonym: "proximal straight tubules" EXACT PLURAL [] xref: TAO:0002239 xref: ZFIN:ZDB-ANAT-080417-100 is_a: ZFA:0005171 ! duct relationship: end ZFS:0000037 ! Larval:Day 5 relationship: part_of ZFA:0000150 ! pronephric duct relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001622 name: pronephric distal early tubule namespace: zebrafish_anatomy def: "Portion of the pronephric duct (or tubule as described by Wingert et al, 2007) which is just posterior to the proximal straight tubule." [ZFIN:ZDB-PUB-071029-9] synonym: "pronephric distal early tubules" EXACT PLURAL [] xref: TAO:0002236 xref: ZFIN:ZDB-ANAT-080417-101 is_a: ZFA:0005171 ! duct relationship: end ZFS:0000037 ! Larval:Day 5 relationship: part_of ZFA:0000150 ! pronephric duct relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001623 name: posterior pronephric duct namespace: zebrafish_anatomy def: "Most posterior portion of the pronephric duct (or tubule as described by Wingert et al, 2007) which ends at the cloacal chamber at the pronephric duct opening." [ZFIN:ZDB-PUB-071029-9] synonym: "posterior pronephric ducts" EXACT PLURAL [] xref: TAO:0002225 xref: ZFIN:ZDB-ANAT-080417-102 is_a: ZFA:0005171 ! duct relationship: end ZFS:0000037 ! Larval:Day 5 relationship: part_of ZFA:0000150 ! pronephric duct relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001624 name: pronephric distal late tubule namespace: zebrafish_anatomy def: "Portion of the pronephric duct (or tubule as described by Wingert et al, 2007) which is just posterior to the distal early tubule." [ZFIN:ZDB-PUB-071029-9] synonym: "distal late tubules" EXACT PLURAL [] xref: ZFIN:ZDB-ANAT-080417-103 is_a: ZFA:0005171 ! duct relationship: end ZFS:0000037 ! Larval:Day 5 relationship: part_of ZFA:0000150 ! pronephric duct relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001625 name: optic nerve head namespace: zebrafish_anatomy def: "Portion of cranial nerve II where large fasicles of axons from the optic fiber layer come together prior to leaving the eye." [ZFIN:curator] synonym: "optic nerve heads" EXACT PLURAL [] xref: TAO:0002213 xref: ZFIN:ZDB-ANAT-080417-104 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000435 ! cranial nerve II relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001626 name: cerebral spinal fluid namespace: zebrafish_anatomy def: "Portion of organism substance that is a clear fluid that occupies the subarachnoid space and the ventricular system around and inside the brain." [ZFIN:curator] synonym: "CSF" EXACT [] xref: TAO:0002184 xref: ZFIN:ZDB-ANAT-080417-105 is_a: ZFA:0001487 ! portion of organism substance relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001627 name: lagenar capsule namespace: zebrafish_anatomy def: "Anatomical cluster that consists of a bulla formed by the exoccipital and basioccipital bones, and surrounds the lagena." [ZFIN:curator] synonym: "lagenar capsules" EXACT PLURAL [] xref: TAO:0001620 xref: ZFIN:ZDB-ANAT-080417-106 is_a: ZFA:0001478 ! anatomical cluster relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001628 name: replacement bone namespace: zebrafish_anatomy def: "Bone that forms as a replacement of another structural tissue." [ZFIN:curator] synonym: "replacement bones" EXACT PLURAL [] xref: TAO:0001637 xref: ZFIN:ZDB-ANAT-080417-107 is_a: ZFA:0001514 ! bone relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001629 name: perichordal bone namespace: zebrafish_anatomy def: "Replacement bone that forms within the connective tissue surrounding the notochord." [ZFIN:curator] synonym: "perichordal bones" EXACT PLURAL [] xref: TAO:0001639 xref: ZFIN:ZDB-ANAT-080417-108 is_a: ZFA:0001628 ! replacement bone relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001630 name: perichondral bone namespace: zebrafish_anatomy def: "Replacement bone that forms within the connective tissue surrounding cartilage." [ZFIN:curator] synonym: "perichondral bones" EXACT PLURAL [] xref: TAO:0001638 xref: ZFIN:ZDB-ANAT-080417-109 is_a: ZFA:0001693 ! chondral bone relationship: develops_from ZFA:0001634 ! perichondrium relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001631 name: notochordal ossification namespace: zebrafish_anatomy def: "Perichordal bone that surrounds the anterior tip of the notochord." [ZFIN:curator] xref: TAO:0001640 xref: ZFIN:ZDB-ANAT-080417-110 is_a: ZFA:0001629 ! perichordal bone relationship: develops_from ZFA:0001633 ! perichordal connective tissue relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001632 name: portion of connective tissue namespace: zebrafish_anatomy def: "Portion of tissue that consists of mesodermally derived cells and intercellular matrix comprised of protein fibers and carbohydrates, which supports, ensheathes and binds together other tissues." [ZFIN:curator] xref: TAO:0001641 xref: ZFIN:ZDB-ANAT-080417-111 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001633 name: perichordal connective tissue namespace: zebrafish_anatomy def: "Portion of connective tissue which surrounds the notochord." [ZFIN:curator] xref: TAO:0001642 xref: ZFIN:ZDB-ANAT-080417-112 is_a: ZFA:0001632 ! portion of connective tissue relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001634 name: perichondrium namespace: zebrafish_anatomy def: "Portion of connective tissue which surrounds cartilage." [ZFIN:curator] synonym: "cartilage connective tissue" EXACT [] xref: TAO:0001643 xref: ZFIN:ZDB-ANAT-080417-113 is_a: ZFA:0001632 ! portion of connective tissue relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001635 name: intramembranous bone namespace: zebrafish_anatomy def: "Bone that forms directly within mesenchyme, and does not replace other tissues." [ZFIN:curator] synonym: "intramembranous bones" EXACT PLURAL [] xref: TAO:0001644 xref: ZFIN:ZDB-ANAT-080417-114 is_a: ZFA:0001514 ! bone relationship: develops_from ZFA:0000393 ! mesenchyme relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001636 name: membrane bone namespace: zebrafish_anatomy def: "Intramembranous bone that forms deep in the organism." [ZFIN:curator] synonym: "membrane bones" EXACT PLURAL [] xref: TAO:0001645 xref: ZFIN:ZDB-ANAT-080417-115 is_a: ZFA:0001635 ! intramembranous bone relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001637 name: bony projection namespace: zebrafish_anatomy def: "Portion of connective tissue that is an extension of a bone." [ZFIN:curator] synonym: "bony projections" EXACT PLURAL [] synonym: "process" EXACT [TAO:0001834] xref: TAO:0001646 xref: TAO:0001834 xref: ZFIN:ZDB-ANAT-080417-116 is_a: ZFA:0001632 ! portion of connective tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001514 ! bone relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001638 name: statoacoustic (VIII) nucleus namespace: zebrafish_anatomy synonym: "cochlear nucleus" EXACT [] synonym: "vestibulocochlear nucleus" EXACT [] xref: TAO:0002243 xref: ZFIN:ZDB-ANAT-080417-117 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000029 ! hindbrain relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001639 name: vascular endothelium namespace: zebrafish_anatomy def: "Simple squamous epithelium which lines blood and lymphatic vessels and the heart." [ZFIN:curator] synonym: "endothelia" EXACT PLURAL [] xref: TAO:0002171 xref: ZFIN:ZDB-ANAT-080417-118 is_a: ZFA:0001498 ! simple squamous epithelium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005249 ! vasculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001640 name: cephalic flexure namespace: zebrafish_anatomy def: "Ventral bend in the brain occurring caudal to the adenohypophyseal placode." [ZFIN:curator] synonym: "ventral flexure" EXACT [] xref: TAO:0002181 xref: ZFIN:ZDB-ANAT-080417-119 relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0000008 ! brain relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0001641 name: rudimentary neural arch namespace: zebrafish_anatomy def: "Neural arch on the urostyle. It does not support a neural spine. Sanger and McCune 2002." [ZFIN:curator] xref: TAO:0001666 xref: ZFIN:ZDB-ANAT-080417-120 is_a: ZFA:0001066 ! neural arch relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000158 ! urostyle relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001642 name: tooth row namespace: zebrafish_anatomy def: "Anatomical cluster consisting of adjacent teeth constituting a row." [ZFIN:curator] synonym: "tooth rows" EXACT PLURAL [] xref: TAO:0001667 xref: ZFIN:ZDB-ANAT-080417-121 is_a: ZFA:0001478 ! anatomical cluster relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001643 name: anatomical space namespace: zebrafish_anatomy def: "Non-material anatomical entity of three dimensions, that is generated by morphogenetic or other physiologic processes; is surrounded by one or more anatomical structures; contains one or more organism substances or anatomical structures." [ZFIN:curator] comment: Part_of parents of these terms should be changed to be located_in rather then part_of when we get the appropriate relation. synonym: "anatomical spaces" EXACT PLURAL [] xref: CARO:0000005 xref: TAO:0001668 xref: ZFIN:ZDB-ANAT-080417-122 is_a: ZFA:0100000 ! zebrafish anatomical entity relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000001 ! Zygote:1-cell [Term] id: ZFA:0001644 name: articular cartilage namespace: zebrafish_anatomy synonym: "articular cartilages" EXACT PLURAL [] xref: TAO:0001670 xref: ZFIN:ZDB-ANAT-080417-123 is_a: ZFA:0001460 ! pharyngeal arch cartilage relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001645 name: angular bone namespace: zebrafish_anatomy def: "Dermal bone that is located posterior to the dentary and lateral to the articular and retroarticular bones of the lower jaw. The angular forms the outer dermal sheet of the posterior part of the lower jaw. The angular bears a portion of the mandibular sensory canal. The angular is a paired bone." [TAO:curator] synonym: "angular bones" EXACT PLURAL [] xref: TAO:0001669 xref: ZFIN:ZDB-ANAT-080417-124 is_a: ZFA:0001590 ! dermal bone relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001646 name: anal fin radial namespace: zebrafish_anatomy def: "Internal skeletal supports of the anal fin." [TAO:curator] synonym: "anal fin radials" EXACT PLURAL [] xref: TAO:0001671 xref: ZFIN:ZDB-ANAT-080417-125 is_a: ZFA:0000271 ! radial relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001647 name: dorsal fin radial namespace: zebrafish_anatomy def: "Internal skeletal supports of the dorsal fin." [TAO:curator] synonym: "dorsal fin radials" EXACT PLURAL [] xref: TAO:0001672 xref: ZFIN:ZDB-ANAT-080417-126 is_a: ZFA:0000271 ! radial relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001648 name: cardiac neural crest namespace: zebrafish_anatomy def: "Neural crest that migrates into the pharyngeal arches and heart, forming connective tissue that separates the vessels of the heart." [ZFIN:curator] xref: TAO:0002173 xref: ZFIN:ZDB-ANAT-081013-23 is_a: ZFA:0000045 ! neural crest relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001649 name: infraorbital series namespace: zebrafish_anatomy def: "Anatomical cluster that is the series of dermal bonesassociated with the infraorbital sensory canal located under and posterior to the eye." [ZFIN:curator] synonym: "circumorbital series" EXACT [] xref: TAO:0001709 xref: ZFIN:ZDB-ANAT-081013-24 is_a: ZFA:0001478 ! anatomical cluster relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000040 ! Larval:Days 14-20 [Term] id: ZFA:0001650 name: branchial mesenchyme namespace: zebrafish_anatomy synonym: "gill mesenchyme" EXACT [] xref: TAO:0002172 xref: ZFIN:ZDB-ANAT-081013-25 is_a: ZFA:0000113 ! head mesenchyme relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001651 name: hypobranchial muscle namespace: zebrafish_anatomy def: "Head muscle that originates on the anterior region of the cleithrum and inserts on the urohyal. The hypobranchial forms initially as left and right parts that later fuse together forming a cone shape." [ZFIN:ZDB-PUB-080306-33] synonym: "sternohyoideus" EXACT [] xref: TAO:0002200 xref: ZFIN:ZDB-ANAT-081013-26 is_a: ZFA:0001652 ! head muscle relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0001652 name: head muscle namespace: zebrafish_anatomy def: "Muscle which is part of the head." [ZFIN:curator] synonym: "cephalic muscle" EXACT [] synonym: "cranial muscle " RELATED [] xref: TAO:0002198 xref: ZFIN:ZDB-ANAT-081013-27 is_a: ZFA:0005145 ! muscle relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000328 ! cephalic musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001653 name: pericardial muscle namespace: zebrafish_anatomy def: "Muscle which is paired and runs anterio-posteriorly along the heart and is covered with epicardium." [ZFIN:ZDB-PUB-001026-2] xref: TAO:0002221 xref: ZFIN:ZDB-ANAT-081013-28 is_a: ZFA:0005145 ! muscle relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000473 ! trunk musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001654 name: opercular cavity namespace: zebrafish_anatomy def: "Anatomical space which is located beneath the operculum and external to the gills." [ZFIN:curator] xref: TAO:0002154 xref: ZFIN:ZDB-ANAT-081013-29 is_a: ZFA:0001643 ! anatomical space relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001114 ! head relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001655 name: pericardial cavity namespace: zebrafish_anatomy def: "Anatomical space in which the heart is located and is surrounded by the pericardium." [ZFIN:curator] xref: TAO:0002220 xref: ZFIN:ZDB-ANAT-081013-30 is_a: ZFA:0001643 ! anatomical space relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001438 ! coelom relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001656 name: pleuroperitoneal cavity namespace: zebrafish_anatomy def: "Anatomical space which contains the abdominal visceral and swim bladder. Located posterior to the pericardial cavity, separated by the transverse septum. From Functional Anatomy of the Vertebrates, third edition." [ISBN:0030223695, ZFIN:curator] xref: TAO:0002224 xref: ZFIN:ZDB-ANAT-081013-31 is_a: ZFA:0001643 ! anatomical space relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001438 ! coelom relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001657 name: supraoptic tract namespace: zebrafish_anatomy def: "CNS tract/commissure which extends between the telencephalon and diencephalon." [ZFIN:ZDB-PUB-961014-955] synonym: "SOT" EXACT [] xref: TAO:0002244 xref: ZFIN:ZDB-ANAT-081013-32 is_a: ZFA:0000145 ! CNS white matter relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000008 ! brain relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0001658 name: hindbrain nucleus namespace: zebrafish_anatomy xref: TAO:0002177 xref: ZFIN:ZDB-ANAT-081013-33 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000029 ! hindbrain relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001659 name: diencephalic nucleus namespace: zebrafish_anatomy xref: TAO:0002191 xref: ZFIN:ZDB-ANAT-081013-34 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000101 ! diencephalon relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001660 name: telencephalic nucleus namespace: zebrafish_anatomy xref: TAO:0002178 xref: ZFIN:ZDB-ANAT-081013-35 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000079 ! telencephalon relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001662 name: preglomerular nucleus namespace: zebrafish_anatomy def: "Diencephalic nucleus which is located in the caudal tuberculum. The preglomerular nuclei make up most of the migrated nuclei within the caudal tuberculum. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] xref: TAO:0002226 xref: ZFIN:ZDB-ANAT-081013-37 is_a: ZFA:0001659 ! diencephalic nucleus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000633 ! caudal tuberculum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001663 name: cranial nerve root namespace: zebrafish_anatomy xref: TAO:0002190 xref: ZFIN:ZDB-ANAT-081013-38 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000641 ! cranial nerve relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001665 name: midbrain nucleus namespace: zebrafish_anatomy xref: TAO:0002209 xref: ZFIN:ZDB-ANAT-081013-40 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000128 ! midbrain relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001666 name: periventricular nucleus of ventral telencephalon namespace: zebrafish_anatomy def: "Telencephalic nucleus which is in contact with the median ependymal lining of the ventricle and consists of the dorsal, ventral, supracommissural and postcommissural nuclei of the ventral telencephalon. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] xref: TAO:0002222 xref: ZFIN:ZDB-ANAT-081013-41 is_a: ZFA:0001660 ! telencephalic nucleus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000304 ! ventral telencephalon relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001667 name: peripheral nucleus of ventral telencephalon namespace: zebrafish_anatomy def: "Telencephalic nucleus which has migrated away from the ependyma and consists of the central, lateral nuclei and the dorsal and ventral entopeduncular nuclei. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] xref: TAO:0002179 xref: ZFIN:ZDB-ANAT-081013-42 is_a: ZFA:0001660 ! telencephalic nucleus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000304 ! ventral telencephalon relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001668 name: central nucleus of ventral telencephalon namespace: zebrafish_anatomy def: "Peripheral nucleus of the ventral telencephalon which is located immediately lateral to the dorsal nucleus of the ventral telencephalon. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209, ZFIN:curator] synonym: "area ventralis telencephali, nucleus centralis" EXACT [] xref: TAO:0002180 xref: ZFIN:ZDB-ANAT-081013-43 is_a: ZFA:0001667 ! peripheral nucleus of ventral telencephalon relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001669 name: intermediate nucleus namespace: zebrafish_anatomy def: "Diencephalic nucleus which is located between the dorsal hypothalamus and the caudal tuberal nucleus and does not contain tyrosine hydroxylase immunoreactive cells." [ZFIN:ZDB-PUB-001220-2] xref: TAO:0002202 xref: ZFIN:ZDB-ANAT-081013-44 is_a: ZFA:0001659 ! diencephalic nucleus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000633 ! caudal tuberculum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001670 name: notochord posterior region namespace: zebrafish_anatomy def: "Portion of tissue that is the part of the notochord located in the caudal fin." [ZFIN:curator] xref: TAO:0001821 xref: ZFIN:ZDB-ANAT-090212-9 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000135 ! notochord relationship: part_of ZFA:0000862 ! caudal fin skeleton relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0001671 name: macula communis namespace: zebrafish_anatomy def: "Epithelium that is the primary epthelium of the developing inner ear and has anterior and posterior maculae as its parts. These maculae later move apart into distinct regions of epithelium." [ZFIN:ZDB-PUB-961014-383] xref: TAO:0002206 xref: ZFIN:ZDB-ANAT-090212-10 is_a: ZFA:0001486 ! epithelium relationship: end ZFS:0000028 ! Segmentation:26+ somites relationship: part_of ZFA:0000217 ! inner ear relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0001672 name: dorsolateral septum namespace: zebrafish_anatomy def: "Portion of tissue that grows in from the dorsolateral wall of the otic vesicle, forming a dorsolateral partition between the developing anterior and posterior semicircular canals." [ZFIN:ZDB-PUB-961014-383] synonym: "dorsal bar" RELATED [] xref: TAO:0002193 xref: ZFIN:ZDB-ANAT-090212-11 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000262 ! posterior semicircular canal relationship: part_of ZFA:0000314 ! anterior semicircular canal relationship: start ZFS:0000032 ! Pharyngula:High-pec [Term] id: ZFA:0001673 name: pronephric podocyte namespace: zebrafish_anatomy def: "Podocyte that is part of the pronephros." [ZFIN:curator] xref: TAO:0002237 xref: ZFIN:ZDB-ANAT-090212-12 is_a: ZFA:0009285 ! podocyte relationship: end ZFS:0000037 ! Larval:Day 5 relationship: part_of ZFA:0001557 ! pronephric glomerulus relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001674 name: mesonephric podocyte namespace: zebrafish_anatomy def: "Podocyte that is part of the kidney (mesonephros)." [ZFIN:curator] xref: TAO:0002208 xref: ZFIN:ZDB-ANAT-090212-13 is_a: ZFA:0009285 ! podocyte relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001288 ! renal glomerulus relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001675 name: ligament namespace: zebrafish_anatomy def: "Portion of connective tissue that is a fibrous band connecting bones or cartilages or supporting an organ." [ZFIN:curator] xref: TAO:0001682 xref: ZFIN:ZDB-ANAT-090212-14 is_a: ZFA:0001632 ! portion of connective tissue relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001676 name: annular ligament namespace: zebrafish_anatomy def: "Ligament that is in the eye and is located at the angle between the cornea and the iris." [ZFIN:ZDB-PUB-070629-16] xref: TAO:0002141 xref: ZFIN:ZDB-ANAT-090212-15 is_a: ZFA:0001675 ! ligament relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000107 ! eye relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001677 name: floor plate midbrain region namespace: zebrafish_anatomy def: "Floor plate that is part of the midbrain." [ZFIN:curator] xref: TAO:0002196 xref: ZFIN:ZDB-ANAT-090212-16 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0000022 ! floor plate relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001678 name: immature eye namespace: zebrafish_anatomy def: "Multi-tissue structure that consists of the structures that develop into the retina and lens." [ZFIN:curator] xref: TAO:0002201 xref: ZFIN:ZDB-ANAT-090226-1 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0001679 name: lens vesicle namespace: zebrafish_anatomy def: "Portion of tissue that gives rise to the lens." [ZFIN:curator] xref: TAO:0002205 xref: ZFIN:ZDB-ANAT-090226-2 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000122 ! lens placode relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0001678 ! immature eye relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0001680 name: parvocellular preoptic nucleus namespace: zebrafish_anatomy def: "Diencephalic nucleus that is part of the preoptic area. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209] xref: TAO:0002219 xref: ZFIN:ZDB-ANAT-090922-147 is_a: ZFA:0001659 ! diencephalic nucleus relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Melissa Haendel creation_date: 2009-03-23T01:16:53Z [Term] id: ZFA:0001681 name: grey matter namespace: zebrafish_anatomy def: "Multi-tissue comprised of neurons, dendrites, axon terminals, glial cells, and capillaries." [ZFIN:curator] synonym: "gray mater" RELATED [] synonym: "gray matter" EXACT [] xref: TAO:0002197 xref: ZFIN:ZDB-ANAT-090922-148 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000012 ! central nervous system relationship: start ZFS:0000000 ! Unknown created_by: Melissa Haendel creation_date: 2009-03-23T01:47:27Z [Term] id: ZFA:0001682 name: white matter namespace: zebrafish_anatomy def: "Multi-tissue structure comprised largely of myelinated axons." [ZFIN:curator] synonym: "white mater" RELATED [] xref: TAO:0002142 xref: ZFIN:ZDB-ANAT-090922-149 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000012 ! central nervous system relationship: start ZFS:0000000 ! Unknown created_by: Melissa Haendel creation_date: 2009-03-23T01:50:38Z [Term] id: ZFA:0001683 name: corneal epithelium namespace: zebrafish_anatomy def: "Portion of tissue comprised of four to six layers of nonkeratinized, stratified squamous cells and represents approximately 60% of the thickness of the cornea." [ZFIN:ZDB-PUB-061010-3] xref: TAO:0002187 xref: ZFIN:ZDB-ANAT-090922-150 is_a: ZFA:0001486 ! epithelium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000640 ! cornea relationship: start ZFS:0000034 ! Hatching:Pec-fin created_by: Melissa Haendel creation_date: 2009-03-23T02:11:11Z [Term] id: ZFA:0001684 name: Bowman's layer namespace: zebrafish_anatomy def: "Acellular anatomical structure that is the zone of condensed collagen fibers underneath the basement membrane of the corneal epithelium that overlays the corneal stroma layer." [ZFIN:ZDB-PUB-050701-15, ZFIN:ZDB-PUB-061010-3] synonym: "anterior elastic lamina" EXACT [] synonym: "anterior limiting membrane" RELATED [] xref: TAO:0002155 xref: ZFIN:ZDB-ANAT-090922-151 is_a: ZFA:0000382 ! acellular anatomical structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000640 ! cornea relationship: start ZFS:0000039 ! Larval:Days 7-13 created_by: Melissa Haendel creation_date: 2009-03-23T02:11:47Z [Term] id: ZFA:0001685 name: corneal stroma namespace: zebrafish_anatomy def: "Portion of tissue that is located basal to Bowman's layer and distal to Descemet's membrane and is comprised largely of connective tissue." [ZFIN:ZDB-PUB-061010-3] xref: TAO:0002189 xref: ZFIN:ZDB-ANAT-090922-152 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000640 ! cornea relationship: start ZFS:0000034 ! Hatching:Pec-fin created_by: Melissa Haendel creation_date: 2009-03-23T02:12:16Z [Term] id: ZFA:0001686 name: Descemet's membrane namespace: zebrafish_anatomy def: "Acellular anatomical structure composed of collagen, Descemet's membrane is secreted as a basement membrane of the corneal endothelium. Located between the stroma and the corneal endothelium, it is approximately 0.15 micrometer thick at 6 months post-fertilization." [ZFIN:ZDB-PUB-050701-15, ZFIN:ZDB-PUB-061010-3] synonym: "posterior limiting membrane" EXACT [] xref: TAO:0002157 xref: ZFIN:ZDB-ANAT-090922-153 is_a: ZFA:0000382 ! acellular anatomical structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000640 ! cornea relationship: start ZFS:0000034 ! Hatching:Pec-fin created_by: Melissa Haendel creation_date: 2009-03-23T02:12:32Z [Term] id: ZFA:0001687 name: corneal endothelium namespace: zebrafish_anatomy def: "Epithelium that is the innermost layer of the cornea and is comprised of a monolayer of polygonal cells." [ZFIN:ZDB-PUB-061010-3] xref: TAO:0002186 xref: ZFIN:ZDB-ANAT-090922-154 is_a: ZFA:0001486 ! epithelium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000640 ! cornea relationship: start ZFS:0000034 ! Hatching:Pec-fin created_by: Melissa Haendel creation_date: 2009-03-23T02:13:25Z [Term] id: ZFA:0001688 name: corneal primordium namespace: zebrafish_anatomy def: "Portion of tissue that is part of the eye and gives rise to the mature, fully layered cornea." [ZFIN:ZDB-PUB-061010-3] xref: TAO:0002188 xref: ZFIN:ZDB-ANAT-090922-155 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000033 ! Hatching:Long-pec relationship: part_of ZFA:0000107 ! eye relationship: start ZFS:0000029 ! Pharyngula:Prim-5 created_by: Melissa Haendel creation_date: 2009-03-23T04:36:20Z [Term] id: ZFA:0001689 name: anatomical line namespace: zebrafish_anatomy def: "Non-material anatomical entity of one dimension, which forms a boundary of an anatomical surface or is a modulation of an anatomical surface." [CARO:MAH] xref: CARO:0000008 xref: TAO:0001837 xref: ZFIN:ZDB-ANAT-090922-156 is_a: ZFA:0100000 ! zebrafish anatomical entity relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000001 ! Zygote:1-cell created_by: Melissa Haendel creation_date: 2009-04-30T02:46:34Z [Term] id: ZFA:0001690 name: groove namespace: zebrafish_anatomy def: "Anatomical line that delineates a furrow or depression in an organ or tissue." [ZFIN:curator] xref: TAO:0001838 xref: ZFIN:ZDB-ANAT-090922-157 is_a: ZFA:0001689 ! anatomical line relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000001 ! Zygote:1-cell created_by: Melissa Haendel creation_date: 2009-04-30T02:48:53Z [Term] id: ZFA:0001691 name: cerebellar granule cell namespace: zebrafish_anatomy def: "Granule cell that is part of the cerebellum." [CL:curator] xref: CL:0000989 xref: CL:0001031 xref: TAO:0002182 xref: ZFIN:ZDB-ANAT-090922-158 is_a: ZFA:0009070 ! granule cell relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000358 ! granular layer corpus cerebelli relationship: part_of ZFA:0000766 ! granular layer valvula cerebelli relationship: start ZFS:0000000 ! Unknown created_by: Melissa Haendel creation_date: 2009-04-30T03:18:48Z [Term] id: ZFA:0001692 name: hindbrain commissure namespace: zebrafish_anatomy def: "CNS white matter that crosses the midline within the hindbrain." [ZFIN:ZDB-PUB-090417-11] xref: TAO:0002199 xref: ZFIN:ZDB-ANAT-090922-159 is_a: ZFA:0000145 ! CNS white matter relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000029 ! hindbrain relationship: start ZFS:0000030 ! Pharyngula:Prim-15 created_by: Melissa Haendel creation_date: 2009-06-18T12:33:21Z [Term] id: ZFA:0001693 name: chondral bone namespace: zebrafish_anatomy def: "Replacement bone that forms within or surrounding a cartilaginous skeletal element." [zfin:curator] xref: ZFIN:ZDB-ANAT-090922-160 is_a: ZFA:0001628 ! replacement bone relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Melissa Haendel creation_date: 2009-07-29T11:34:33Z [Term] id: ZFA:0001694 name: olfactory granule cell namespace: zebrafish_anatomy def: "Granule cell that is part of the olfactory bulb." [CL:curator] xref: CL:0000626 xref: TAO:0002211 xref: ZFIN:ZDB-ANAT-090922-161 is_a: ZFA:0009070 ! granule cell relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000402 ! olfactory bulb relationship: start ZFS:0000000 ! Unknown created_by: Melissa Haendel creation_date: 2009-04-30T03:21:40Z [Term] id: ZFA:0001695 name: dorsolateral motor nucleus of vagal nerve namespace: zebrafish_anatomy def: "Motor nucleus of vagal nerve that is located within the dorsolateral portion of rhomobomere 8." [ZFIN:ZDB-PUB-090417-11] synonym: "dlX" EXACT [] xref: TAO:0002192 xref: ZFIN:ZDB-ANAT-090922-162 is_a: ZFA:0000297 ! motor nucleus of vagal nerve relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000030 ! Pharyngula:Prim-15 created_by: Melissa Haendel creation_date: 2009-08-04T10:42:49Z [Term] id: ZFA:0001696 name: medial motor nucleus of vagal nerve namespace: zebrafish_anatomy def: "Motor nucleus of vagal nerve that is located within the medial portion of rhomobomere 8." [ZFIN:ZDB-PUB-090417-11] synonym: "mmX" EXACT [] xref: TAO:0002207 xref: ZFIN:ZDB-ANAT-090922-163 is_a: ZFA:0000297 ! motor nucleus of vagal nerve relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000033 ! Hatching:Long-pec created_by: Melissa Haendel creation_date: 2009-08-04T10:45:00Z [Term] id: ZFA:0001697 name: octaval nerve motor nucleus namespace: zebrafish_anatomy def: "Hindbrain nucleus which consists of cell bodies whose axons exit the hindbrain via cranial nerve VIII and innervate hair cells of the lateral line and inner ear. The neurons of these nuclei are unusual in that they extend both contra- and ipsilateral dendrites." [ZFIN:ZDB-PUB-061229-17] synonym: "cranial nerve VIII motor nucleus" EXACT [] synonym: "octaval nerve motor nuclei" EXACT PLURAL [] synonym: "OLe" EXACT [] xref: TAO:0002174 xref: ZFIN:ZDB-ANAT-090922-164 is_a: ZFA:0001658 ! hindbrain nucleus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000545 ! medulla oblongata relationship: start ZFS:0000000 ! Unknown created_by: Melissa Haendel creation_date: 2009-08-04T01:04:59Z [Term] id: ZFA:0001698 name: rostral octaval nerve motor nucleus namespace: zebrafish_anatomy def: "Octaval nerve motor nucleus that is initially located within rhombomere 6." [ZFIN:ZDB-PUB-061229-17] synonym: "REN" EXACT [ZFIN:ZDB-PUB-061229-17] synonym: "ROLE" EXACT [] synonym: "rostral cranial nerve VIII motor nucleus" EXACT [] synonym: "rostral efferent nuclei" RELATED PLURAL [ZFIN:ZDB-PUB-061229-17] xref: TAO:0002175 xref: ZFIN:ZDB-ANAT-090922-165 is_a: ZFA:0001697 ! octaval nerve motor nucleus relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Melissa Haendel creation_date: 2009-08-04T01:21:34Z [Term] id: ZFA:0001699 name: caudal octaval nerve motor nucleus namespace: zebrafish_anatomy def: "Octaval nerve motor nucleus that is initially located within rhombomere 7." [ZFIN:ZDB-PUB-061229-17] synonym: "caudal efferent nuclei" RELATED PLURAL [ZFIN:ZDB-PUB-061229-17] synonym: "CEN" EXACT [ZFIN:ZDB-PUB-061229-17] synonym: "RELL" EXACT [] synonym: "rostral cranial nerve VIII motor nucleus" EXACT [] xref: TAO:0002176 xref: ZFIN:ZDB-ANAT-090922-166 is_a: ZFA:0001697 ! octaval nerve motor nucleus relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Melissa Haendel creation_date: 2009-08-04T01:24:26Z [Term] id: ZFA:0001700 name: tunica externa namespace: zebrafish_anatomy def: "Multi-tissue structure that is the external layer of the swim bladder that is covered by the peritoneum, and made of elastic fibres and ichthyocol (short needles of collagen)." [http:www.briancoad.com/Dictionary/T.htm] xref: TAO:0002245 xref: ZFIN:ZDB-ANAT-090922-167 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000076 ! swim bladder relationship: start ZFS:0000000 ! Unknown created_by: Melissa Haendel creation_date: 2009-08-05T12:54:11Z [Term] id: ZFA:0001701 name: tunica interna namespace: zebrafish_anatomy def: "Multi-tissue structure that is the internal layer of the swim bladder and is comprised of thin endoderm and a smooth muscle layer called the muscularis mucosa with longitudinal and circular fibres with some collagen." [http:www.briancoad.com/Dictionary/T.htm] xref: TAO:0002246 xref: ZFIN:ZDB-ANAT-090922-168 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000076 ! swim bladder relationship: start ZFS:0000000 ! Unknown created_by: Melissa Haendel creation_date: 2009-08-05T12:55:22Z [Term] id: ZFA:0001702 name: apical ectodermal ridge namespace: zebrafish_anatomy def: "Proliferative region that is part of the developing fin fold or fin." [ZFIN:curator] xref: TAO:0002146 xref: ZFIN:ZDB-ANAT-090922-169 is_a: ZFA:0000098 ! proliferative region relationship: end ZFS:0000037 ! Larval:Day 5 relationship: start ZFS:0000000 ! Unknown created_by: Melissa Haendel creation_date: 2009-08-05T02:38:05Z [Term] id: ZFA:0001703 name: epidermal placode namespace: zebrafish_anatomy def: "Portion of tissue that is a thickening and reshaping of the epidermal basal stratum cells beneath which fibroblasts accumulate to form the scale primordium." [ZFIN:ZDB-PUB-081008-12] xref: TAO:0002195 xref: ZFIN:ZDB-ANAT-090922-170 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0001180 ! epidermal basal stratum relationship: start ZFS:0000041 ! Larval:Days 21-29 created_by: Melissa Haendel creation_date: 2009-08-05T03:22:18Z [Term] id: ZFA:0001704 name: scale primordium namespace: zebrafish_anatomy def: "A portion of tissue that is an accumulation of fibroblasts beneath the epidermal placode and giving rise to the scale." [ZFIN:ZDB-PUB-081008-12] xref: TAO:0002242 xref: ZFIN:ZDB-ANAT-090922-171 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0001119 ! dermis relationship: start ZFS:0000041 ! Larval:Days 21-29 created_by: Melissa Haendel creation_date: 2009-08-05T03:35:05Z [Term] id: ZFA:0001705 name: endolymphatic duct namespace: zebrafish_anatomy def: "Duct that is part of the inner ear and connects to the semicircular canals ending in a pouch." [http:en.wikipedia.org/wiki/Endolymphatic_duct, ZFIN:ZDB-PUB-090112-20] xref: TAO:0002194 xref: ZFIN:ZDB-ANAT-090922-172 is_a: ZFA:0005171 ! duct relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000217 ! inner ear relationship: start ZFS:0000000 ! Unknown created_by: Melissa Haendel creation_date: 2009-08-11T09:15:55Z [Term] id: ZFA:0001706 name: Purkinje cell layer corpus cerebelli namespace: zebrafish_anatomy def: "Portion of tissue that is part of the corpus cerebelli and contains Purkinje cells." [ZFIN:ZDB-PUB-090422-9] xref: TAO:0002240 xref: ZFIN:ZDB-ANAT-090922-173 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000188 ! corpus cerebelli relationship: start ZFS:0000000 ! Unknown created_by: Melissa Haendel creation_date: 2009-08-11T09:41:06Z [Term] id: ZFA:0001707 name: brainstem namespace: zebrafish_anatomy def: "Multi-tissue structure that has as its parts the medulla oblongata of the hindbrain and the tegmentum of the midbrain." [ISBN:3764351209] xref: TAO:0002156 xref: ZFIN:ZDB-ANAT-090922-174 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Melissa Haendel creation_date: 2009-08-13T01:39:24Z [Term] id: ZFA:0001708 name: cerebellar white matter namespace: zebrafish_anatomy def: "CNS white matter that is part of the cerebellum." [ZFIN:curator] synonym: "cerebellar tracts/commissures" EXACT PLURAL [] xref: TAO:0002183 xref: ZFIN:ZDB-ANAT-090922-175 is_a: ZFA:0000145 ! CNS white matter relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000100 ! cerebellum relationship: start ZFS:0000000 ! Unknown created_by: Melissa Haendel creation_date: 2009-08-13T01:48:48Z [Term] id: ZFA:0001709 name: Purkinje cell layer valvula cerebelli namespace: zebrafish_anatomy def: "Portion of tissue that is part of the valvula cerebelli and contains Purkinje cells." [ZFIN:ZDB-PUB-090422-9] xref: TAO:0002241 xref: ZFIN:ZDB-ANAT-090922-176 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000603 ! valvula cerebelli relationship: start ZFS:0000000 ! Unknown created_by: Melissa Haendel creation_date: 2009-08-13T03:00:08Z [Term] id: ZFA:0001710 name: mossy fiber namespace: zebrafish_anatomy def: "Portion of tissue that consists of afferent axons from the spinal cord, sensory medullary nuclei, reticular nuclei and dorsal tegmental nucei into the corpus cerebelli and valvula cerebelli, where they synapse within the granule cell layer." [ISBN:3764351209, ZFIN:ZDB-PUB-090422-9] synonym: "mossy fibers" EXACT PLURAL [] xref: TAO:0002210 xref: ZFIN:ZDB-ANAT-090922-177 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000188 ! corpus cerebelli relationship: part_of ZFA:0000603 ! valvula cerebelli relationship: start ZFS:0000000 ! Unknown created_by: Melissa Haendel creation_date: 2009-08-13T03:02:35Z [Term] id: ZFA:0001711 name: climbing fiber namespace: zebrafish_anatomy def: "Portion of tissue that consists of afferent axons from the inferior olive and synapsing with Purkinje cells within the molecular layer of the valvula cerebelli and corpus cerebelli." [ISBN:3764351209, ZFIN:ZDB-PUB-090422-9] synonym: "climbing fibers" EXACT PLURAL [] xref: TAO:0002185 xref: ZFIN:ZDB-ANAT-090922-178 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000188 ! corpus cerebelli relationship: part_of ZFA:0000603 ! valvula cerebelli relationship: start ZFS:0000000 ! Unknown created_by: Melissa Haendel creation_date: 2009-08-13T03:18:48Z [Term] id: ZFA:0001712 name: presumptive bulbus arteriosus namespace: zebrafish_anatomy def: "Portion of tissue that is part of the heart tube and will become the bulbus arteriosus." [ZFIN:curator] xref: TAO:0002230 xref: ZFIN:ZDB-ANAT-090922-179 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000818 ! vagal neural crest relationship: end ZFS:0000031 ! Pharyngula:Prim-25 relationship: part_of ZFA:0000360 ! heart tube relationship: start ZFS:0000029 ! Pharyngula:Prim-5 created_by: Melissa Haendel creation_date: 2009-08-31T11:25:06Z [Term] id: ZFA:0001713 name: parallel fiber namespace: zebrafish_anatomy def: "Portion of tissue that consists of axons of cerebellar granule cells that synapse onto Purkinje cell dendrites." [ISBN:3764351209, ZFIN:ZDB-PUB-090422-9] synonym: "parallel fibers" EXACT PLURAL [] xref: TAO:0002218 xref: ZFIN:ZDB-ANAT-090922-180 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000394 ! molecular layer corpus cerebelli relationship: part_of ZFA:0000913 ! molecular layer valvula cerebelli relationship: start ZFS:0000000 ! Unknown created_by: Melissa Haendel creation_date: 2009-08-13T04:32:51Z [Term] id: ZFA:0001714 name: presumptive ventral mesoderm namespace: zebrafish_anatomy xref: TAO:0002235 xref: ZFIN:ZDB-ANAT-090922-181 is_a: ZFA:0001377 ! presumptive mesoderm relationship: end ZFS:0000019 ! Gastrula:Shield relationship: start ZFS:0000014 ! Blastula:Sphere created_by: Melissa Haendel creation_date: 2009-08-24T11:02:45Z [Term] id: ZFA:0001715 name: otic vesicle protrusion namespace: zebrafish_anatomy def: "Portion of tissue within the otic vesicle that consists of a thin layer of otic epithelium covering a finger-shaped core of acellular matrix." [ZFIN:ZDB-PUB-090330-11] xref: TAO:0002215 xref: ZFIN:ZDB-ANAT-090922-182 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000035 ! Larval:Protruding-mouth relationship: part_of ZFA:0000051 ! otic vesicle relationship: start ZFS:0000032 ! Pharyngula:High-pec created_by: Melissa Haendel creation_date: 2009-08-25T10:45:23Z [Term] id: ZFA:0001716 name: otic vesicle ventral protrusion namespace: zebrafish_anatomy def: "Otic vesicle protrusion that is initially ventrally located and then fuses with the lateral protrusion, giving rise to the pillar of the lateral semicircular canal." [ZFIN:ZDB-PUB-090330-11] xref: TAO:0002216 xref: ZFIN:ZDB-ANAT-090922-183 is_a: ZFA:0001715 ! otic vesicle protrusion relationship: end ZFS:0000035 ! Larval:Protruding-mouth relationship: start ZFS:0000034 ! Hatching:Pec-fin created_by: Melissa Haendel creation_date: 2009-08-25T10:53:24Z [Term] id: ZFA:0001717 name: pillar of the semicircular canal namespace: zebrafish_anatomy def: "Portion of tissue around which the semicircular canals flow." [ZFIN:ZDB-PUB-961014-383] xref: TAO:0002223 xref: ZFIN:ZDB-ANAT-090922-184 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000431 ! semicircular canal relationship: start ZFS:0000035 ! Larval:Protruding-mouth created_by: Melissa Haendel creation_date: 2009-08-25T10:57:52Z [Term] id: ZFA:0001718 name: presumptive atrium heart tube namespace: zebrafish_anatomy def: "Multi-tissue structure that is part of the heart tube and will become the cardiac atrium." [ZFIN:ZDB-PUB-080218-11] xref: TAO:0002228 xref: ZFIN:ZDB-ANAT-090922-185 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001721 ! presumptive atrium primitive heart tube relationship: end ZFS:0000031 ! Pharyngula:Prim-25 relationship: part_of ZFA:0000360 ! heart tube relationship: start ZFS:0000029 ! Pharyngula:Prim-5 created_by: Melissa Haendel creation_date: 2009-08-25T12:20:59Z [Term] id: ZFA:0001719 name: presumptive cardiac ventricle heart tube namespace: zebrafish_anatomy def: "Multi-tissue structure that is part of the heart tube and will become the cardiac ventricle." [ZFIN:ZDB-PUB-080218-11] xref: TAO:0002231 xref: ZFA:0002231 xref: ZFIN:ZDB-ANAT-090922-186 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001720 ! presumptive cardiac ventricle primitive heart tube relationship: end ZFS:0000031 ! Pharyngula:Prim-25 relationship: part_of ZFA:0000360 ! heart tube relationship: start ZFS:0000029 ! Pharyngula:Prim-5 created_by: Melissa Haendel creation_date: 2009-08-25T12:21:18Z [Term] id: ZFA:0001720 name: presumptive cardiac ventricle primitive heart tube namespace: zebrafish_anatomy def: "Multi-tissue structure that is part of the primitive heart tube and will become the cardiac ventricle." [ZFIN:ZDB-PUB-080218-11] xref: TAO:0002232 xref: ZFIN:ZDB-ANAT-090922-187 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0000149 ! primitive heart tube relationship: start ZFS:0000028 ! Segmentation:26+ somites created_by: Melissa Haendel creation_date: 2009-08-25T01:10:23Z [Term] id: ZFA:0001721 name: presumptive atrium primitive heart tube namespace: zebrafish_anatomy def: "Multi-tissue structure that is part of the primitive heart tube and will become the cardiac atrium." [ZFIN:ZDB-PUB-080218-11] xref: TAO:0002229 xref: ZFIN:ZDB-ANAT-090922-188 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0000149 ! primitive heart tube relationship: start ZFS:0000028 ! Segmentation:26+ somites created_by: Melissa Haendel creation_date: 2009-08-25T01:10:28Z [Term] id: ZFA:0001722 name: presumptive sinus venosus namespace: zebrafish_anatomy def: "Portion of tissue that is part of the heart tube and will become the sinus venosus." [ZFIN:curator] xref: TAO:0002234 xref: ZFIN:ZDB-ANAT-090922-189 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000031 ! Pharyngula:Prim-25 relationship: part_of ZFA:0000360 ! heart tube relationship: start ZFS:0000029 ! Pharyngula:Prim-5 created_by: Melissa Haendel creation_date: 2009-08-31T11:40:57Z [Term] id: ZFA:0001723 name: presumptive atrioventricular canal namespace: zebrafish_anatomy def: "Portion of tissue that is part of the heart tube and will become the atrioventricular canal." [ZFIN:curator] xref: TAO:0002227 xref: ZFIN:ZDB-ANAT-090922-190 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000031 ! Pharyngula:Prim-25 relationship: part_of ZFA:0000360 ! heart tube relationship: start ZFS:0000031 ! Pharyngula:Prim-25 created_by: Melissa Haendel creation_date: 2009-08-31T11:57:36Z [Term] id: ZFA:0001724 name: presumptive endocardium namespace: zebrafish_anatomy def: "Portion of tissue that is part of the heart tube and will become the endocardium." [ZFIN:curator] xref: TAO:0002233 xref: ZFIN:ZDB-ANAT-090922-191 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000031 ! Pharyngula:Prim-25 relationship: part_of ZFA:0000360 ! heart tube relationship: start ZFS:0000029 ! Pharyngula:Prim-5 created_by: Melissa Haendel creation_date: 2009-08-31T01:21:44Z [Term] id: ZFA:0001725 name: immature Schwann cell namespace: zebrafish_anatomy comment: Range covers Schwann cell precursor and immature Schwann cell, should be split and put into CL. xref: TAO:0002203 xref: ZFIN:ZDB-ANAT-090922-192 is_a: ZFA:0009147 ! glial cell (sensu Vertebrata) relationship: end ZFS:0000032 ! Pharyngula:High-pec relationship: part_of ZFA:0000142 ! peripheral nervous system relationship: start ZFS:0000025 ! Segmentation:10-13 somites created_by: Melissa Haendel creation_date: 2009-09-08T02:10:35Z [Term] id: ZFA:0005000 name: basal communicating artery namespace: zebrafish_anatomy synonym: "BCA" EXACT [] xref: TAO:0005000 xref: ZFIN:ZDB-ANAT-050915-120 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0005297 ! cranial blood vessel relationship: start ZFS:0000031 ! Pharyngula:Prim-25 [Term] id: ZFA:0005001 name: posterior communicating artery namespace: zebrafish_anatomy def: "An artery that connects caudal division of the internal carotid artery and the basal communicating artery to the basilar artery." [ZFIN:ZDB-PUB-010205-5] synonym: "caudal communicating segment" EXACT [] synonym: "PCA" EXACT [] synonym: "PCS" EXACT [] synonym: "posterior communicating segment of the basilar artery" EXACT [] xref: TAO:0005001 xref: ZFIN:ZDB-ANAT-050915-121 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000031 ! Pharyngula:Prim-25 [Term] id: ZFA:0005002 name: basilar artery namespace: zebrafish_anatomy synonym: "BA" EXACT [] xref: TAO:0005002 xref: ZFIN:ZDB-ANAT-050915-122 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0005297 ! cranial blood vessel relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0005003 name: pharyngeal vasculature namespace: zebrafish_anatomy synonym: "branchial basket" RELATED [] synonym: "branchial vasculature" EXACT [] xref: TAO:0005003 xref: ZFIN:ZDB-ANAT-050915-123 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001267 ! cranial vasculature relationship: part_of ZFA:0001306 ! pharyngeal arch relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005004 name: aortic arch namespace: zebrafish_anatomy def: "Artery that is part of the pharyngeal arches." [ZFIN:ZDB-PUB-010205-5] synonym: "aortic arches" EXACT PLURAL [] synonym: "branchial aortic arches " EXACT PLURAL [ZFIN:ZDB-PUB-080512-6] xref: TAO:0005004 xref: ZFIN:ZDB-ANAT-050915-124 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005003 ! pharyngeal vasculature relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0005005 name: aortic arch 1 namespace: zebrafish_anatomy def: "Aortic arch that is part of pharyngeal arch 1. The paired aortic arch 1 arteries branch off of the ventral aorta, and empty into the right and left lateral dorsal aortas." [ZFIN:ZDB-PUB-010205-5] synonym: "AA1" EXACT [] synonym: "mandibular aortic arch" EXACT [] xref: TAO:0005005 xref: ZFIN:ZDB-ANAT-050915-125 is_a: ZFA:0005004 ! aortic arch relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0001612 ! pharyngeal arch 1 relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0005006 name: aortic arch 2 namespace: zebrafish_anatomy def: "Aortic arch that is part of pharyngeal arch 2. Aortic arch 2 is paired and is a vestigial structure." [ZFIN:ZDB-PUB-010205-5] synonym: "AA2" EXACT [] synonym: "hyoid aortic arch" EXACT [] xref: TAO:0005006 xref: ZFIN:ZDB-ANAT-050915-126 is_a: ZFA:0005004 ! aortic arch relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001611 ! pharyngeal arch 2 relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0005007 name: aortic arch 3 namespace: zebrafish_anatomy def: "Aortic arch that is part of pharyngeal arch 3. The paired aortic arch 3 arteries branch directly from the ventral aorta to the lateral dorsal aorta, and are retained as the branchial arteries providing circulation through the gills in the adult." [ZFIN:ZDB-PUB-010205-5] synonym: "AA3" EXACT [] xref: TAO:0005007 xref: ZFIN:ZDB-ANAT-050915-127 is_a: ZFA:0005004 ! aortic arch relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001606 ! pharyngeal arch 3 relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0005008 name: aortic arch 4 namespace: zebrafish_anatomy def: "Aortic arch that is part of pharyngeal arch 4. The paired aortic arch 4 arteries branch directly from the ventral aorta to the lateral dorsal aorta, and are retained as the branchial arteries providing circulation through the gills in the adult." [ZFIN:ZDB-PUB-010205-5] synonym: "AA4" EXACT [] xref: TAO:0005008 xref: ZFIN:ZDB-ANAT-050915-128 is_a: ZFA:0005004 ! aortic arch relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001607 ! pharyngeal arch 4 relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0005009 name: aortic arch 5 namespace: zebrafish_anatomy def: "Aortic arch that is part of pharyngeal arch 5. Aortic arch 5 artery is paired and has a common trunk with aortic arch 6 from the ventral aorta, and drains via a separate branch of the lateral dorsal aorta. Aortic arches 5 and 6 supply the trunk and tail with oxygenated blood." [ZFIN:ZDB-PUB-010205-5] synonym: "AA5" EXACT [] xref: TAO:0005009 xref: ZFIN:ZDB-ANAT-050915-129 is_a: ZFA:0005004 ! aortic arch relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001608 ! pharyngeal arch 5 relationship: start ZFS:0000034 ! Hatching:Pec-fin [Term] id: ZFA:0005010 name: mid cerebral vein namespace: zebrafish_anatomy def: "The mesencephalic veins (MsV) enter the mid cerebral veins (MCeV) at the dorsal midline. THe MCeVs originate at the dorsal midline, proceed laterally in a ventral direction to drain into the paired primordial midbrain channels (PHBC)." [http:zfin.org/zf_info/zfbook/stages/hatch.html, ZFIN:ZDB-PUB-010205-5] synonym: "MCeV" EXACT [] synonym: "mid-cerebral vein" EXACT [] synonym: "middle cerebral vein" EXACT [] xref: TAO:0005010 xref: ZFIN:ZDB-ANAT-050915-82 is_a: ZFA:0000082 ! vein relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0005297 ! cranial blood vessel relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0005011 name: pseudobranchial artery namespace: zebrafish_anatomy def: "A vascular loop attached to the efferent part of the mandibular arch that forms at 3.5 dpf." [ZFIN:ZDB-PUB-010205-5] synonym: "pseudobranchial arteries" EXACT PLURAL [] xref: TAO:0005011 xref: ZFIN:ZDB-ANAT-050915-130 is_a: ZFA:0000005 ! artery relationship: develops_from ZFA:0005005 ! aortic arch 1 relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000035 ! Larval:Protruding-mouth [Term] id: ZFA:0005012 name: afferent filamental artery namespace: zebrafish_anatomy def: "Artery that enters the gill filament." [ZFIN:curator] synonym: "AFA" EXACT [] synonym: "afferent filamental arteries" EXACT PLURAL [] xref: TAO:0005012 xref: ZFIN:ZDB-ANAT-050915-131 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000666 ! filamental artery relationship: part_of ZFA:0000716 ! afferent branchial artery relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005013 name: concurrent branch afferent branchial artery namespace: zebrafish_anatomy def: "The branch of the afferent branchial artery that continues posterodorsally." [ZFIN:ZDB-PUB-010205-5] synonym: "CCB" EXACT [] xref: TAO:0005013 xref: ZFIN:ZDB-ANAT-050915-132 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000716 ! afferent branchial artery relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005014 name: recurrent branch afferent branchial artery namespace: zebrafish_anatomy def: "The anterioventral proceeding branch of the afferent branchial artery." [ZFIN:ZDB-PUB-010205-5] synonym: "RCB" EXACT [] synonym: "recurrent branch afferent branchial arteries" EXACT PLURAL [] xref: TAO:0005014 xref: ZFIN:ZDB-ANAT-050915-133 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000716 ! afferent branchial artery relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005015 name: afferent lamellar arteriole namespace: zebrafish_anatomy synonym: "afferent lamellar arterioles" EXACT PLURAL [] synonym: "AFL" EXACT [] xref: TAO:0005015 xref: ZFIN:ZDB-ANAT-050915-134 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000211 ! gill lamella relationship: part_of ZFA:0005012 ! afferent filamental artery relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005016 name: aortic arch 6 namespace: zebrafish_anatomy def: "Aortic arch that is part of pharyngeal arch 6. Aortic arch 6 artery is paired and has a common trunk with aortic arch 5 from the ventral aorta, and drains via a separate branch of the lateral dorsal aorta. Aortic arches 5 and 6 supply the trunk and tail with oxygenated blood." [ZFIN:ZDB-PUB-010205-5] synonym: "AA6" EXACT [] xref: TAO:0005016 xref: ZFIN:ZDB-ANAT-050915-135 is_a: ZFA:0005004 ! aortic arch relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0001609 ! pharyngeal arch 6 relationship: start ZFS:0000034 ! Hatching:Pec-fin [Term] id: ZFA:0005017 name: primordial midbrain channel namespace: zebrafish_anatomy def: "The vessel between the anterior cerebral vein and the mid cerebral vein." [ZFIN:ZDB-PUB-010205-5] synonym: "PMBC" EXACT [] xref: TAO:0005017 xref: ZFIN:ZDB-ANAT-050915-83 is_a: ZFA:0000082 ! vein relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0005297 ! cranial blood vessel relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0005018 name: efferent filamental artery namespace: zebrafish_anatomy def: "Artery that exits the gill filament." [ZFIN:curator] synonym: "EFA" EXACT [] xref: TAO:0005018 xref: ZFIN:ZDB-ANAT-050915-136 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000202 ! efferent branchial artery relationship: part_of ZFA:0000666 ! filamental artery relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005019 name: efferent lamellar arteriole namespace: zebrafish_anatomy synonym: "efferent lamellar arterioles" EXACT PLURAL [] synonym: "ELA" EXACT [] xref: TAO:0005019 xref: ZFIN:ZDB-ANAT-050915-137 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000211 ! gill lamella relationship: part_of ZFA:0005018 ! efferent filamental artery relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005020 name: central artery namespace: zebrafish_anatomy def: "Artery that irrigates the forebrain and midbrain." [ZFIN:ZDB-PUB-010205-5] synonym: "CtA" EXACT [] xref: TAO:0005020 xref: ZFIN:ZDB-ANAT-050915-138 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0000099 ! brain vasculature relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0005021 name: cerebellar central artery namespace: zebrafish_anatomy def: "Extend upward from the PCS, branch to provide an arterial feed to the hindbrain, then drain back down into the PHBC " [ZFIN:ZDB-PUB-010205-5] synonym: "CCtA" EXACT [] xref: TAO:0005021 xref: ZFIN:ZDB-ANAT-050915-139 is_a: ZFA:0005020 ! central artery relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000035 ! Larval:Protruding-mouth [Term] id: ZFA:0005022 name: opercular artery namespace: zebrafish_anatomy def: "The opercular artery arises from the hyoid stump on the first aortic arch, then follows the lateral margin of the operculum (gill covering) ventrally to reconnect into the proximal part of the first aortic arch." [ZFIN:ZDB-PUB-010205-5] synonym: "external carotid artery" RELATED [] synonym: "ORA" EXACT [] xref: TAO:0005022 xref: ZFIN:ZDB-ANAT-050915-140 is_a: ZFA:0000005 ! artery relationship: develops_from ZFA:0005005 ! aortic arch 1 relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0005023 name: hematopoietic system namespace: zebrafish_anatomy xref: TAO:0005023 xref: ZFIN:ZDB-ANAT-051116-11 is_a: ZFA:0001439 ! anatomical system relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0005024 name: trunk vasculature namespace: zebrafish_anatomy xref: TAO:0005024 xref: ZFIN:ZDB-ANAT-050915-84 is_a: ZFA:0005249 ! vasculature relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0005025 name: dorsal longitudinal anastomotic vessel namespace: zebrafish_anatomy def: "Trunk vessel that runs medially along the dorsal-most portion of the trunk and post-vent region. The DLAVs are formed by the longitudinal anastamoses of the intersegmental vessels to form a right and left pair of dorsal longitudinal anastamotic vessels. These paired vessels remodel to form a single plexiform vessel beginning at 3dpf continuing until after 7dpf. The basilar artery connects to the DLAVs at the caudal end of the medulla oblongata. In the early embryo (2.5-3.5 dpf) the primitive hindbrain channels also connect to the DLAV." [ZFIN:ZDB-PUB-010205-5] comment: Eventually half of the ISVs will carry blood from the aorta to the DLAVs, and half from the DLAV to the posterior cardinal vein. synonym: "DLAV" EXACT [] xref: TAO:0005025 xref: ZFIN:ZDB-ANAT-050915-85 is_a: ZFA:0005314 ! blood vessel relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0001073 ! axial vasculature relationship: part_of ZFA:0005024 ! trunk vasculature relationship: part_of ZFA:0005037 ! post-vent vasculature relationship: start ZFS:0000031 ! Pharyngula:Prim-25 [Term] id: ZFA:0005026 name: primary head sinus namespace: zebrafish_anatomy def: "Main route for venous drainage of the anterior and mid cerebral veins as well as portions of the primordial hindbrain channel." [ZFIN:ZDB-PUB-010205-5] synonym: "lateral head vein" EXACT [] synonym: "PHS" EXACT [] xref: TAO:0005026 xref: ZFIN:ZDB-ANAT-050915-86 is_a: ZFA:0000082 ! vein relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0005297 ! cranial blood vessel relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0005027 name: posterior cerebral vein namespace: zebrafish_anatomy def: "Vein that drains the dorsal longitudinal vessel and the caudal portions of the venous capillary network of the medulla oblongata." [ZFIN:ZDB-PUB-010205-5] synonym: "caudal cerebral vein" EXACT [] synonym: "PCeV" EXACT [] xref: TAO:0005027 xref: ZFIN:ZDB-ANAT-050915-87 is_a: ZFA:0000082 ! vein relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0000099 ! brain vasculature relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0005028 name: ventral wall of dorsal aorta namespace: zebrafish_anatomy def: "Region where blood progenitor markers are expressed. Probable site of definitive hematopoiesis between 36hpf and 4dpf." [ZFIN:curator] synonym: "AGM" RELATED [] synonym: "aorta gonad mesonephros region" EXACT [] synonym: "DA roof" RELATED [] synonym: "DA-PCV joint " EXACT [] synonym: "dorsal aorta - posterior cardinal vein joint" EXACT [ZFIN:ZDB-PUB-061227-29] synonym: "DP joint" EXACT [] xref: TAO:0005028 xref: ZFIN:ZDB-ANAT-051116-12 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000014 ! dorsal aorta relationship: part_of ZFA:0005023 ! hematopoietic system relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0005029 name: rostral blood island namespace: zebrafish_anatomy def: "Hematopoietic tissue derived from the cephalic mesoderm. Predominantly produces myeloid cells." [ZFIN:curator] synonym: "anterior myeloid compartment" RELATED [] synonym: "RBI" EXACT [] xref: TAO:0005029 xref: ZFIN:ZDB-ANAT-051116-13 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0005041 ! anterior lateral plate mesoderm relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0005023 ! hematopoietic system relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0005030 name: dorsal ciliary vein namespace: zebrafish_anatomy synonym: "DCV" EXACT [] xref: TAO:0005030 xref: ZFIN:ZDB-ANAT-051116-14 is_a: ZFA:0000082 ! vein relationship: develops_from ZFA:0005082 ! dorsal branch nasal ciliary artery relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0005297 ! cranial blood vessel relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0005031 name: dorsal longitudinal vein namespace: zebrafish_anatomy def: "Vessel that connects to the primitive hindbrain channel and the basilar artery at the caudal end of the medulla oblongata." [ZFIN:ZDB-PUB-010205-5] synonym: "DLV" EXACT [] xref: TAO:0005031 xref: ZFIN:ZDB-ANAT-051116-15 is_a: ZFA:0000082 ! vein relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0000099 ! brain vasculature relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0005032 name: optic vein namespace: zebrafish_anatomy def: "Vein that connects to the hyaloid vein that drains the eye. External to eye." [ZFIN:ZDB-PUB-010205-5] synonym: "OV" EXACT [] xref: TAO:0005032 xref: ZFIN:ZDB-ANAT-051116-16 is_a: ZFA:0000082 ! vein relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0007057 ! ocular blood vessel relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0005033 name: vertebral artery namespace: zebrafish_anatomy def: "Is an pair of arteries that form from the intersegmental vessels at the level of the base of the spinal cord, adjacent to the myotome." [ZFIN:ZDB-PUB-010205-5] synonym: "vertebral arteries" EXACT PLURAL [] xref: TAO:0005033 xref: ZFIN:ZDB-ANAT-051116-17 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000036 ! Larval:Day 4 [Term] id: ZFA:0005034 name: parachordal vessel namespace: zebrafish_anatomy def: "Vessels run longitudinally along the horizontal myoseptum. These vessels are not functional until after lumenization which occurs near 4 dpf." [ZFIN:ZDB-PUB-030908-4] synonym: "PAV" EXACT [] xref: TAO:0005034 xref: ZFIN:ZDB-ANAT-051116-18 is_a: ZFA:0000082 ! vein relationship: develops_from ZFA:0000477 ! posterior cardinal vein relationship: develops_from ZFA:0001057 ! intersegmental vein relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0005024 ! trunk vasculature relationship: part_of ZFA:0005037 ! post-vent vasculature relationship: start ZFS:0000036 ! Larval:Day 4 [Term] id: ZFA:0005035 name: subintestinal vein namespace: zebrafish_anatomy synonym: "SIV" EXACT [] synonym: "vitelline vein" EXACT [] xref: TAO:0005035 xref: ZFIN:ZDB-ANAT-051116-19 is_a: ZFA:0000082 ! vein relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0005024 ! trunk vasculature relationship: start ZFS:0000034 ! Hatching:Pec-fin [Term] id: ZFA:0005036 name: supraintestinal artery namespace: zebrafish_anatomy def: "A continuation of the anterior mesenteric artery, which branches out from the dorsal aorta just caudal to the pronephric glomus." [ZFIN:ZDB-PUB-010205-5] synonym: "SIA" EXACT [] xref: TAO:0005036 xref: ZFIN:ZDB-ANAT-051116-20 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000035 ! Larval:Protruding-mouth [Term] id: ZFA:0005037 name: post-vent vasculature namespace: zebrafish_anatomy synonym: "tail vasculature" RELATED [] xref: TAO:0005037 xref: ZFIN:ZDB-ANAT-051116-21 is_a: ZFA:0005249 ! vasculature relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005038 name: supraintestinal vein namespace: zebrafish_anatomy synonym: "supraintestinal veins" EXACT PLURAL [] xref: TAO:0005038 xref: ZFIN:ZDB-ANAT-051116-22 is_a: ZFA:0000082 ! vein relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0005024 ! trunk vasculature relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0005039 name: anterior lateral mesoderm namespace: zebrafish_anatomy synonym: "ALM" EXACT [] xref: TAO:0005039 xref: ZFIN:ZDB-ANAT-051116-23 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0001065 ! lateral mesoderm relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0005040 name: posterior lateral mesoderm namespace: zebrafish_anatomy synonym: "PLM" EXACT [] xref: TAO:0005040 xref: ZFIN:ZDB-ANAT-051116-24 is_a: ZFA:0000041 ! mesoderm relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0001065 ! lateral mesoderm relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0005041 name: anterior lateral plate mesoderm namespace: zebrafish_anatomy synonym: "ALPM" EXACT [] xref: TAO:0005041 xref: ZFIN:ZDB-ANAT-051116-25 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0000121 ! lateral plate mesoderm relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0005042 name: posterior lateral plate mesoderm namespace: zebrafish_anatomy synonym: "PLPM" EXACT [] xref: TAO:0005042 xref: ZFIN:ZDB-ANAT-051116-26 is_a: ZFA:0000041 ! mesoderm relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0000121 ! lateral plate mesoderm relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0005043 name: nevus namespace: zebrafish_anatomy def: "An ectopic melanophore accumulation analogous to a nevi (mole) in humans." [ZFIN:curator] synonym: "f-nevi" EXACT [] synonym: "naevus" EXACT [] xref: TAO:0005043 xref: ZFIN:ZDB-ANAT-051116-27 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001119 ! dermis relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005044 name: optic artery namespace: zebrafish_anatomy def: "The artery that carries blood to the eye. It branches from the internal carotid artery and enters the eye ventrally through the optic fissure." [ZFIN:ZDB-PUB-010205-5] synonym: "optic arteries" EXACT PLURAL [] xref: TAO:0005044 xref: ZFIN:ZDB-ANAT-051116-28 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0007057 ! ocular blood vessel relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0005045 name: hyaloid artery namespace: zebrafish_anatomy def: "Artery that is internal to the eye." [ZFIN:ZDB-PUB-010205-5] synonym: "hyaloid arteries" EXACT PLURAL [] xref: TAO:0005045 xref: ZFIN:ZDB-ANAT-051116-29 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005046 ! hyaloid vessel relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0005046 name: hyaloid vessel namespace: zebrafish_anatomy def: "Vessels that are associated with the posterior region of the lens." [ZFIN :ZDB-PUB-050701-15] synonym: "hyaloid vasculature" RELATED [] synonym: "hyaloid vessels" EXACT PLURAL [] xref: TAO:0005046 xref: ZFIN:ZDB-ANAT-051116-30 is_a: ZFA:0005314 ! blood vessel relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0007057 ! ocular blood vessel relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0005047 name: hyaloid vein namespace: zebrafish_anatomy def: "Vein internal to the eye." [ZFIN:ZDB-PUB-010205-5] synonym: "hyaloid veins" EXACT PLURAL [] xref: TAO:0005047 xref: ZFIN:ZDB-ANAT-051116-31 is_a: ZFA:0000082 ! vein relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005046 ! hyaloid vessel relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0005048 name: primitive prosencephalic artery namespace: zebrafish_anatomy def: "Vessel that branches from cranial division of the internal carotid artery, extending laterally around the rostral end of the head." [ZFIN:ZDB-PUB-010205-5] synonym: "PPrA" EXACT [] xref: TAO:0005048 xref: ZFIN:ZDB-ANAT-051116-32 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000033 ! Hatching:Long-pec relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0005049 name: prosencephalic artery namespace: zebrafish_anatomy def: "After the primitive prosencephalic artery forms it becomes disconnected from the cranial division of the internal carotid artery and instead it connects to the anterior mesencephalic central artery and the communicating vessels of the palatocerebral artery." [ZFIN:curator] synonym: "PrA" EXACT [] xref: TAO:0005049 xref: ZFIN:ZDB-ANAT-051116-33 is_a: ZFA:0000005 ! artery relationship: develops_from ZFA:0005048 ! primitive prosencephalic artery relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0005050 name: palatocerebral artery namespace: zebrafish_anatomy def: "The PLA branches ventrally from the CrDI. It extends rostrally along the base of mid- and forebrain, then loops medially and links to the corresponding vessel from the other side of the embryo." [ZFIN:ZDB-PUB-010205-5] synonym: "PLA" EXACT [] xref: TAO:0005050 xref: ZFIN:ZDB-ANAT-051116-34 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0005051 name: communicating vessel palatocerebral artery namespace: zebrafish_anatomy def: "Connect the palatocerebral artery with the prosencephalic atery." [ZFIN:ZDB-PUB-010205-5] synonym: "CMV" EXACT [] synonym: "communicating vessels" EXACT [] xref: TAO:0005051 xref: ZFIN:ZDB-ANAT-051116-35 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0005052 name: anterior mesencephalic central artery namespace: zebrafish_anatomy def: "Arteries that irrigate rostral regions of the midbrain. They extend between the Basial communicating artery to the anterior cerebral vein." [ZFIN:ZDB-PUB-010205-5] synonym: "AMCtA" EXACT [] synonym: "rostral mesencephalic central artery" EXACT [] xref: TAO:0005052 xref: ZFIN:ZDB-ANAT-051116-36 is_a: ZFA:0005020 ! central artery relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0005053 name: nasal ciliary artery namespace: zebrafish_anatomy synonym: "NCA" EXACT [] xref: TAO:0005053 xref: ZFIN:ZDB-ANAT-051116-37 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000031 ! Pharyngula:Prim-25 [Term] id: ZFA:0005054 name: inner optic circle namespace: zebrafish_anatomy synonym: "IOC" EXACT [] xref: TAO:0005054 xref: ZFIN:ZDB-ANAT-051116-38 is_a: ZFA:0000005 ! artery relationship: develops_from ZFA:0005082 ! dorsal branch nasal ciliary artery relationship: develops_from ZFA:0005083 ! ventral branch nasal ciliary artery relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0007057 ! ocular blood vessel relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005055 name: median palatocerebral vein namespace: zebrafish_anatomy def: "Drains the PLA loop proceeds straight caudally along the cranial midline just above the pharynx, just below the diencephalon. Forms a 'T' with the palatocerebral veins." [ZFIN:ZDB-PUB-010205-5] synonym: "MPLV" EXACT [] xref: TAO:0005055 xref: ZFIN:ZDB-ANAT-051116-39 is_a: ZFA:0000082 ! vein relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0005297 ! cranial blood vessel relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0005056 name: palatocerebral vein namespace: zebrafish_anatomy def: "Vein that drains the median palatocerebral vein into the optic vein." [ZFIN:ZDB-PUB-010205-5] synonym: "PLV" EXACT [] xref: TAO:0005056 xref: ZFIN:ZDB-ANAT-051116-40 is_a: ZFA:0000082 ! vein relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0005297 ! cranial blood vessel relationship: start ZFS:0000034 ! Hatching:Pec-fin [Term] id: ZFA:0005057 name: epicardium namespace: zebrafish_anatomy def: "External layer of the heart." [ZFIN:curator] xref: TAO:0005057 xref: ZFIN:ZDB-ANAT-060131-63 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000114 ! heart relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005058 name: ventricular epicardium namespace: zebrafish_anatomy def: "The external layer of the ventricle bounding the ventricular myocardium. It is formed by a single layer of mesothelial cells supported by a basal lamina, and imbricated with collagen, fibroblasts, and vascular structures in the subepicardial space." [ZFIN:ZDB-PUB-010912-30] xref: TAO:0005058 xref: ZFIN:ZDB-ANAT-060131-64 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000009 ! cardiac ventricle relationship: part_of ZFA:0005057 ! epicardium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005059 name: trabecular layer namespace: zebrafish_anatomy def: "The layer of the myocardium composed of projections of contractile myocytes. The trabecular layer is bounded internally by the endocardium. Unlike the trabeculations of higher vertebrates, both atrial and ventricular trabeculae of the zebrafish have more strut-like character, and are more uniform without apparent regional differences." [ZFIN:ZDB-PUB-010912-30] synonym: "trabecula" RELATED [] xref: TAO:0005059 xref: ZFIN:ZDB-ANAT-060131-65 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001319 ! myocardium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005060 name: trabecular layer of ventricle namespace: zebrafish_anatomy xref: TAO:0005060 xref: ZFIN:ZDB-ANAT-060131-66 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005059 ! trabecular layer relationship: part_of ZFA:0005061 ! ventricular myocardium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005061 name: ventricular myocardium namespace: zebrafish_anatomy def: "Muscular layer of the cardiac ventricle composed of a compact myocardial layer surrounding the trabecular layer." [ZFIN:ZDB-PUB-010912-30] xref: TAO:0005061 xref: ZFIN:ZDB-ANAT-060131-67 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000009 ! cardiac ventricle relationship: part_of ZFA:0001319 ! myocardium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005062 name: compact layer of ventricle namespace: zebrafish_anatomy def: "The outer layer the ventricular myocardium, muscle fibers are arranged in a compact form and involved the entire ventricle." [ZFIN:curator] xref: TAO:0005062 xref: ZFIN:ZDB-ANAT-060131-68 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005061 ! ventricular myocardium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005063 name: cardiac conduction system namespace: zebrafish_anatomy synonym: "central conduction system" EXACT [] xref: TAO:0005063 xref: ZFIN:ZDB-ANAT-060331-61 is_a: ZFA:0001439 ! anatomical system relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000114 ! heart relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005064 name: atrioventricular valve namespace: zebrafish_anatomy def: "The atrioventricular valve has four distinct leaflets oriented anterior, posterior, left, and right of the atrioventricular orifice." [ZFIN:ZDB-PUB-010912-30] xref: TAO:0005064 xref: ZFIN:ZDB-ANAT-060131-69 is_a: ZFA:0005065 ! heart valve relationship: develops_from ZFA:0001317 ! endocardial cushion relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000009 ! cardiac ventricle relationship: part_of ZFA:0000471 ! atrium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005065 name: heart valve namespace: zebrafish_anatomy synonym: "heart valves" EXACT PLURAL [] xref: TAO:0005065 xref: ZFIN:ZDB-ANAT-060131-70 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000114 ! heart relationship: start ZFS:0000035 ! Larval:Protruding-mouth [Term] id: ZFA:0005066 name: bulbus arteriosus outer layer namespace: zebrafish_anatomy def: "Composed of scattered layers of interrupted elastic lamina." [ZFIN:ZDB-PUB-010912-30] synonym: "bulbus arteriosus externa" EXACT [] xref: TAO:0005066 xref: ZFIN:ZDB-ANAT-060131-71 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000173 ! bulbus arteriosus relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005067 name: bulbus arteriosus middle layer namespace: zebrafish_anatomy def: "Composed of 7-10 layers of helically arranged smooth muscle cells surrounded by a fine network of collagen, reticular, and elastic fibrils." [ZFIN:ZDB-PUB-010912-30] synonym: "bulbus arteriosus media" EXACT [] xref: TAO:0005067 xref: ZFIN:ZDB-ANAT-060131-72 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000173 ! bulbus arteriosus relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005068 name: bulbus arteriosus inner layer namespace: zebrafish_anatomy def: "Composed of subendothelium with longitudinally oriented collagen, reticular fibrils, elastic fibers, and smooth muscle cells bound by a thin endothelial layer." [ZFIN:ZDB-PUB-010912-30] synonym: "bulbus arteriosus intima" EXACT [] xref: TAO:0005068 xref: ZFIN:ZDB-ANAT-060131-73 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000173 ! bulbus arteriosus relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005069 name: sinoatrial node namespace: zebrafish_anatomy xref: TAO:0005069 xref: ZFIN:ZDB-ANAT-060331-62 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005063 ! cardiac conduction system relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005070 name: atrioventricular node namespace: zebrafish_anatomy def: "The portion of tissue in the atrioventricular canal that slows impulse propigation between the atrium and cardiac ventricle." [ZFIN:ZDB-PUB-060227-6] synonym: "AV node" EXACT [] xref: TAO:0005070 xref: ZFIN:ZDB-ANAT-060331-63 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0005073 ! atrioventricular ring relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001315 ! atrioventricular canal relationship: part_of ZFA:0005063 ! cardiac conduction system relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005071 name: distal conduction system namespace: zebrafish_anatomy synonym: "His-Purkinje system" EXACT [] synonym: "His-Purkinji network" EXACT [] synonym: "HPS" EXACT [] xref: TAO:0005071 xref: ZFIN:ZDB-ANAT-060331-64 is_a: ZFA:0005063 ! cardiac conduction system relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000009 ! cardiac ventricle relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005072 name: endocardial ring namespace: zebrafish_anatomy def: "A portion of endocardial tissue that is part of the atrioventricular ring." [ZFIN:curator] xref: TAO:0005072 xref: ZFIN:ZDB-ANAT-060331-65 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000035 ! Larval:Protruding-mouth relationship: part_of ZFA:0001320 ! endocardium relationship: part_of ZFA:0005073 ! atrioventricular ring relationship: start ZFS:0000032 ! Pharyngula:High-pec [Term] id: ZFA:0005073 name: atrioventricular ring namespace: zebrafish_anatomy def: "A ring of conduction tissue that forms in the atrioventricular canal." [ZFIN:ZDB-PUB-060227-6] synonym: "AV ring" EXACT [] xref: TAO:0005073 xref: ZFIN:ZDB-ANAT-060331-66 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000035 ! Larval:Protruding-mouth relationship: part_of ZFA:0001315 ! atrioventricular canal relationship: part_of ZFA:0005063 ! cardiac conduction system relationship: start ZFS:0000032 ! Pharyngula:High-pec [Term] id: ZFA:0005074 name: central cardiac conduction system namespace: zebrafish_anatomy def: "Cardiac conduction system, characterized by slow impulse propagation and prolonged refractory periods." [ZFIN:curator] xref: TAO:0005074 xref: ZFIN:ZDB-ANAT-060331-67 is_a: ZFA:0005063 ! cardiac conduction system relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005075 name: peripheral cardiac conduction system namespace: zebrafish_anatomy def: "Portion of the cardiac conduction system, with rapid impulse propagation." [ZFIN:curator] xref: TAO:0005075 xref: ZFIN:ZDB-ANAT-060331-68 is_a: ZFA:0005063 ! cardiac conduction system relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005076 name: primordial vasculature namespace: zebrafish_anatomy def: "Is a portion of tissue that will develop into vasculature." [ZFIN:curator] xref: TAO:0005076 xref: ZFIN:ZDB-ANAT-060816-33 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000028 ! Segmentation:26+ somites relationship: part_of ZFA:0000010 ! cardiovascular system relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0005077 name: vascular cord namespace: zebrafish_anatomy def: "The primordial vasculature that will develop into blood vessels by the process of tubulogenesis. The vascular cord is composed of angioblast or vascular endothelial cells in a solid linear mass called a cord. The cord then undergoes tubulogenesis to form the lumen of the vessels." [ZFIN:ZDB-PUB-040416-1.pdf] xref: TAO:0005077 xref: ZFIN:ZDB-ANAT-060816-34 is_a: ZFA:0005076 ! primordial vasculature relationship: end ZFS:0000028 ! Segmentation:26+ somites relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0005078 name: middle mesencephalic central artery namespace: zebrafish_anatomy def: "Projects rostrally and dorsally from the AMCtA to irrigate the midportion of the midbrain." [ZFIN:ZDB-PUB-010205-5] synonym: "MMCtA" EXACT [] xref: TAO:0005078 xref: ZFIN:ZDB-ANAT-060816-35 is_a: ZFA:0005020 ! central artery relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0005079 name: posterior mesencephalic central artery namespace: zebrafish_anatomy def: "Project dorsally from BCA to irrigate the caudal part of midbrain " [ZFIN:ZDB-PUB-010205-5] synonym: "caudal mesencephalic central artery" EXACT [] synonym: "PMCtA" EXACT [] xref: TAO:0005079 xref: ZFIN:ZDB-ANAT-060816-36 is_a: ZFA:0005020 ! central artery relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0005080 name: anterior mesenteric artery namespace: zebrafish_anatomy def: "An artery deep in the trunk that connects the dorsal aorta to the supraintestinal artery." [ZFIN:ZDB-PUB-010205-5] synonym: "AMA" EXACT [] synonym: "rostral mesenteric artery" EXACT [] xref: TAO:0005080 xref: ZFIN:ZDB-ANAT-060816-37 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000034 ! Hatching:Pec-fin [Term] id: ZFA:0005081 name: internal carotid artery namespace: zebrafish_anatomy synonym: "ICA" EXACT [] xref: TAO:0005081 xref: ZFIN:ZDB-ANAT-060816-38 is_a: ZFA:0000005 ! artery relationship: develops_from ZFA:0001053 ! primitive internal carotid artery relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000097 ! carotid artery relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005082 name: dorsal branch nasal ciliary artery namespace: zebrafish_anatomy synonym: "dorsal branch nasal ciliary arteries" EXACT PLURAL [] xref: TAO:0005082 xref: ZFIN:ZDB-ANAT-060816-39 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0005053 ! nasal ciliary artery relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0005083 name: ventral branch nasal ciliary artery namespace: zebrafish_anatomy xref: TAO:0005083 xref: ZFIN:ZDB-ANAT-060816-40 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0005053 ! nasal ciliary artery relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0005084 name: metencephalic artery namespace: zebrafish_anatomy def: "These arteies branch dorsally from both sides of the posterior communicating artery looping up to join with the opposite MtA as well as with both middle cerebral veins at the dorsal midline of the head." [ZFIN:ZDB-PUB-010205-5] synonym: "metencephalic arteries" EXACT PLURAL [] xref: TAO:0005084 xref: ZFIN:ZDB-ANAT-060816-41 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000031 ! Pharyngula:Prim-25 [Term] id: ZFA:0005085 name: nasal artery namespace: zebrafish_anatomy def: "The nasal arteries start at the internal carotid artery and travel rostrally, passing along the right and left walls of the nasal sac at the most rostral end of the head. From the nasal sac, the NA flows into the nasal veins." [ZFIN:ZDB-PUB-010205-5] synonym: "NA" EXACT [] xref: TAO:0005085 xref: ZFIN:ZDB-ANAT-060816-42 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000036 ! Larval:Day 4 [Term] id: ZFA:0005086 name: pectoral artery namespace: zebrafish_anatomy def: "The pectoral (subclavian) arteries originate from the dorsal aorta and takes the blood outward into the fin from the paired portion of the dorsal aorta posterior to the last aortic arch. Kimmel et al. 1993" [ZFIN:curator] synonym: "PA" EXACT [] synonym: "subclavian artery" EXACT [] xref: TAO:0005086 xref: ZFIN:ZDB-ANAT-060816-43 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005301 ! pectoral fin blood vessel relationship: start ZFS:0000034 ! Hatching:Pec-fin [Term] id: ZFA:0005087 name: pectoral vein namespace: zebrafish_anatomy synonym: "PV" EXACT [] xref: TAO:0005087 xref: ZFIN:ZDB-ANAT-060816-44 is_a: ZFA:0000082 ! vein relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005301 ! pectoral fin blood vessel relationship: start ZFS:0000034 ! Hatching:Pec-fin [Term] id: ZFA:0005088 name: posterior mesenteric artery namespace: zebrafish_anatomy def: "Branch ventrally from the dorsal aorta and anastomose longitudinally along the dorsal wall of the hindgut, forming the caudal part of the supraintestinal artery." [ZFIN:ZDB-PUB-010205-5] synonym: "caudal mesenteric artery" EXACT [] synonym: "PMA" EXACT [] xref: TAO:0005088 xref: ZFIN:ZDB-ANAT-060816-45 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000034 ! Hatching:Pec-fin [Term] id: ZFA:0005089 name: swim bladder artery namespace: zebrafish_anatomy def: "An elaborate set of vessels that branche off caudally from the anterior mesenteric artery just after the dorsal aorta. The SBA vascular loops are located on the ventral side of the swim bladder." [ZFIN:ZDB-PUB-010205-5] synonym: "SBA" EXACT [] xref: TAO:0005089 xref: ZFIN:ZDB-ANAT-060816-46 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000034 ! Hatching:Pec-fin [Term] id: ZFA:0005090 name: hepatic portal vein namespace: zebrafish_anatomy def: "Vein that collects blood from the small intestine, pancreas and spleen and routes it through the liver." [http://www.vivo.colostate.edu/hbooks/pathphys/digestion/liver/anatomy.html] synonym: "HPV" EXACT [] synonym: "primary hepatic portal vein" RELATED [] xref: TAO:0005090 xref: ZFIN:ZDB-ANAT-060816-47 is_a: ZFA:0000082 ! vein relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000123 ! liver relationship: start ZFS:0000035 ! Larval:Protruding-mouth [Term] id: ZFA:0005091 name: hepatic sinusoid namespace: zebrafish_anatomy def: "Wide thin-walled blood vessels in the liver. The terminal branches of the hepatic portal vein and hepatic artery empty into the sinusoids where the blood mixes. In mammals they have neither venous or arterial markers." [ZFIN:curator] synonym: "hepatic sinusoids" EXACT PLURAL [] xref: TAO:0005091 xref: ZFIN:ZDB-ANAT-060816-48 is_a: ZFA:0005314 ! blood vessel relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000123 ! liver relationship: part_of ZFA:0005024 ! trunk vasculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005092 name: mesencephalic vein namespace: zebrafish_anatomy synonym: "MsV" EXACT [] xref: TAO:0005092 xref: ZFIN:ZDB-ANAT-060816-49 is_a: ZFA:0000082 ! vein relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0005093 name: nasal vein namespace: zebrafish_anatomy synonym: "NV" EXACT [] xref: TAO:0005093 xref: ZFIN:ZDB-ANAT-060816-50 is_a: ZFA:0000082 ! vein relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005297 ! cranial blood vessel relationship: start ZFS:0000036 ! Larval:Day 4 [Term] id: ZFA:0005094 name: optic choroid vascular plexus namespace: zebrafish_anatomy alt_id: ZFA:0005228 def: "Is an ocular vasculature that develops adjacent to the pigment epithelium of the eye. The optic choroid vascular plexus develops from the primitive mesencephalic artery. Initially blood enters from the mesencephalic central artery, and the dorsal ciliary vein. The plexus drains via the ophthalmic vein. The plexus supplies blood to the retina." [ZFIN:ZDB-PUB-010205-5] synonym: "choroid vasculature" EXACT [] synonym: "CVP" EXACT [] xref: TAO:0005094 xref: ZFIN:ZDB-ANAT-060816-51 is_a: ZFA:0007057 ! ocular blood vessel relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000036 ! Larval:Day 4 [Term] id: ZFA:0005095 name: fin vasculature namespace: zebrafish_anatomy xref: TAO:0005095 xref: ZFIN:ZDB-ANAT-060816-52 is_a: ZFA:0005249 ! vasculature relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005096 name: pectoral fin vasculature namespace: zebrafish_anatomy xref: TAO:0005096 xref: ZFIN:ZDB-ANAT-060816-53 is_a: ZFA:0005095 ! fin vasculature relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001161 ! pectoral fin relationship: start ZFS:0000034 ! Hatching:Pec-fin [Term] id: ZFA:0005097 name: caudal fin vasculature namespace: zebrafish_anatomy xref: TAO:0005097 xref: ZFIN:ZDB-ANAT-060816-54 is_a: ZFA:0005095 ! fin vasculature relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005098 name: central ray artery namespace: zebrafish_anatomy def: "Artery that is positioned in the intraray mesenchyme between the hemirays of the lepidotrichia." [ZFIN:ZDB-PUB-031119-3] synonym: "central ray arteries" EXACT PLURAL [] xref: TAO:0005098 xref: ZFIN:ZDB-ANAT-060816-55 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005299 ! fin blood vessel relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005099 name: ray vein namespace: zebrafish_anatomy def: "Vein that flanks and is just lateral to the fin ray, in the interray mesenchyme." [ZFIN:ZDB-PUB-031119-3] synonym: "ray veins" EXACT PLURAL [] xref: TAO:0005099 xref: ZFIN:ZDB-ANAT-060816-56 is_a: ZFA:0000082 ! vein relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005299 ! fin blood vessel relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005100 name: intervessel commissure namespace: zebrafish_anatomy def: "Vessels that travel between artery and veins or vein and vein in a single ray." [ZFIN:curator] synonym: "intervessel comisures" EXACT PLURAL [] xref: TAO:0005100 xref: ZFIN:ZDB-ANAT-060816-57 is_a: ZFA:0005299 ! fin blood vessel relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005101 name: interray vessel namespace: zebrafish_anatomy def: "Vessels that travel between veins in adjacent rays." [ZFIN:curator] synonym: "interray vessels" EXACT PLURAL [] xref: TAO:0005101 xref: ZFIN:ZDB-ANAT-060816-58 is_a: ZFA:0005299 ! fin blood vessel relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005102 name: presumptive median fin fold namespace: zebrafish_anatomy xref: TAO:0005102 xref: ZFIN:ZDB-ANAT-060816-59 is_a: ZFA:0001116 ! presumptive structure relationship: end ZFS:0000028 ! Segmentation:26+ somites relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0005103 name: presumptive ventral fin fold namespace: zebrafish_anatomy xref: TAO:0005103 xref: ZFIN:ZDB-ANAT-060816-60 is_a: ZFA:0005102 ! presumptive median fin fold relationship: end ZFS:0000028 ! Segmentation:26+ somites relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0005104 name: presumptive dorsal fin fold namespace: zebrafish_anatomy xref: TAO:0005104 xref: ZFIN:ZDB-ANAT-060816-61 is_a: ZFA:0005102 ! presumptive median fin fold relationship: end ZFS:0000028 ! Segmentation:26+ somites relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0005105 name: lymph vasculature namespace: zebrafish_anatomy def: "A network of blunt ended vessels lacking direct connection to the blood vascular system. These vessels collect and drain fluids and macromolecules from interstitial spaces throughout the animal. They derive from a subpopulation of endothelial cells and have walls that are much thinner than the blood carrying vessels. Lymphatic vessels are usually classified as either superficial or deep." [ZFIN:curator] synonym: "lymph vessel" EXACT [] synonym: "lymph vessels" EXACT PLURAL [] xref: TAO:0005105 xref: ZFIN:ZDB-ANAT-060816-62 is_a: ZFA:0005249 ! vasculature relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000385 ! lymphatic system relationship: start ZFS:0000035 ! Larval:Protruding-mouth [Term] id: ZFA:0005106 name: longitudinal lateral lymphatic vessel namespace: zebrafish_anatomy synonym: "LLL" EXACT [] xref: TAO:0005106 xref: ZFIN:ZDB-ANAT-060816-63 is_a: ZFA:0005105 ! lymph vasculature relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005107 name: pectoral lymphatic vessel namespace: zebrafish_anatomy synonym: "PL" EXACT [] xref: TAO:0005107 xref: ZFIN:ZDB-ANAT-060816-64 is_a: ZFA:0005105 ! lymph vasculature relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005108 name: facial lymphatic vessel namespace: zebrafish_anatomy synonym: "FL" EXACT [] xref: TAO:0005108 xref: ZFIN:ZDB-ANAT-060816-65 is_a: ZFA:0005105 ! lymph vasculature relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005109 name: jugular lymphatic vessel namespace: zebrafish_anatomy synonym: "JL" EXACT [] xref: TAO:0005109 xref: ZFIN:ZDB-ANAT-060816-66 is_a: ZFA:0005105 ! lymph vasculature relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005110 name: thoracic duct namespace: zebrafish_anatomy xref: TAO:0005110 xref: ZFIN:ZDB-ANAT-060816-67 is_a: ZFA:0005105 ! lymph vasculature relationship: develops_from ZFA:0000477 ! posterior cardinal vein relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005296 ! axial lymph vessel relationship: start ZFS:0000035 ! Larval:Protruding-mouth [Term] id: ZFA:0005111 name: medial forebrain bundle namespace: zebrafish_anatomy synonym: "medial forebrain bundles" EXACT PLURAL [] xref: TAO:0005111 xref: ZFIN:ZDB-ANAT-061101-29 is_a: ZFA:0000145 ! CNS white matter relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005112 name: dorsal lateral line namespace: zebrafish_anatomy def: "One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator] synonym: "dorsal lateral lines" EXACT PLURAL [] xref: TAO:0005112 xref: ZFIN:ZDB-ANAT-061211-16 is_a: ZFA:0001469 ! lateral line relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001471 ! posterior lateral line system relationship: start ZFS:0000034 ! Hatching:Pec-fin [Term] id: ZFA:0005113 name: dorsal lateral line neuromast namespace: zebrafish_anatomy def: "Neuromast that is part of the dorsal lateral line. (Also see Anatomical Atlas entry for lateral line by T. Whitfield.) " [ZFIN:ZDB-PUB-961014-576] synonym: "neuromast dorsal" EXACT [] xref: TAO:0005113 xref: ZFIN:ZDB-ANAT-061211-17 is_a: ZFA:0000243 ! neuromast relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005112 ! dorsal lateral line relationship: start ZFS:0000034 ! Hatching:Pec-fin [Term] id: ZFA:0005114 name: middle lateral line system namespace: zebrafish_anatomy xref: TAO:0005114 xref: ZFIN:ZDB-ANAT-061211-18 is_a: ZFA:0000034 ! lateral line system relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005115 name: primary posterior lateral line primordium namespace: zebrafish_anatomy def: "Primordium that forms the first neuromasts of the posterior lateral line. This primordium travels at 1.5-1.7 somites/hour and deposits neuromast that are polarized along the antero-posterior axis." [ZFIN:curator] synonym: "primary posterior lateral line primordia" EXACT PLURAL [] synonym: "primI" EXACT [] xref: TAO:0005115 xref: ZFIN:ZDB-ANAT-061211-19 is_a: ZFA:0001157 ! posterior lateral line primordium relationship: develops_from ZFA:0001156 ! posterior lateral line placode relationship: end ZFS:0000033 ! Hatching:Long-pec relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0005116 name: secondary posterior lateral line primordium namespace: zebrafish_anatomy def: "Second lateral line primordium. These primordia move at 0.2 somites/hour and deposit neuromasts that are polarized in a dorso-ventral direction." [ZFIN:curator] synonym: "secondary posterior lateral line primordia" EXACT PLURAL [] xref: TAO:0005116 xref: ZFIN:ZDB-ANAT-061211-20 is_a: ZFA:0001157 ! posterior lateral line primordium relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0005117 name: anterior lateral line primordium namespace: zebrafish_anatomy def: "A migrating group of cells originating from an anterior lateral line placode. The primordium deposits neuromasts and interneuromasts between them during its migration." [ZFIN:curator] synonym: "anterior lateral line primordia" EXACT PLURAL [] xref: TAO:0005117 xref: ZFIN:ZDB-ANAT-061211-21 is_a: ZFA:0000228 ! lateral line primordium relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0001468 ! anterior lateral line system relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0005118 name: middle lateral line primordium namespace: zebrafish_anatomy def: "A migrating group of cells originating from the middle lateral line placode. The primordium deposits neuromasts with interneuromasts between them." [ZFIN:curator] synonym: "middle lateral line primordia" EXACT PLURAL [] xref: TAO:0005118 xref: ZFIN:ZDB-ANAT-061211-22 is_a: ZFA:0000228 ! lateral line primordium relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0005114 ! middle lateral line system relationship: start ZFS:0000031 ! Pharyngula:Prim-25 [Term] id: ZFA:0005119 name: barbel primordium namespace: zebrafish_anatomy def: "A surface structure that will eventually grow to form a barbel. The primordium is rich in taste buds. The final location for taste buds present in the primordium is the distal tip of the mature barbel." [ZFIN:curator] synonym: "barbel primordia" EXACT PLURAL [] xref: TAO:0005119 xref: ZFIN:ZDB-ANAT-070517-30 is_a: ZFA:0000292 ! surface structure relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: start ZFS:0000042 ! Juvenile:Days 30-44 [Term] id: ZFA:0005120 name: peritoneum namespace: zebrafish_anatomy def: "The serous membrane that lines the peritoneal cavity. The peritoneum secretes serous fluid which allows free movement of the peritoneum and the intraperitoneal organs." [ZFIN:curator] xref: TAO:0005120 xref: ZFIN:ZDB-ANAT-070517-31 is_a: ZFA:0005425 ! serous membrane relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005121 name: middle lateral line placode namespace: zebrafish_anatomy synonym: "middle lateral line placodes" EXACT PLURAL [] xref: TAO:0005121 xref: ZFIN:ZDB-ANAT-061211-23 is_a: ZFA:0001310 ! dorsolateral placode relationship: end ZFS:0000033 ! Hatching:Long-pec relationship: part_of ZFA:0005114 ! middle lateral line system relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005122 name: dorsal axial hypoblast namespace: zebrafish_anatomy xref: TAO:0005122 xref: ZFIN:ZDB-ANAT-061211-24 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000022 ! Gastrula:Bud relationship: part_of ZFA:0001378 ! axial hypoblast relationship: start ZFS:0000020 ! Gastrula:75%-epiboly [Term] id: ZFA:0005123 name: gut epithelium namespace: zebrafish_anatomy def: "Epithelium lining the lumen of the gut." [ZFIN:curator] xref: TAO:0005123 xref: ZFIN:ZDB-ANAT-061211-25 is_a: ZFA:0001486 ! epithelium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000112 ! gut relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005124 name: intestinal epithelium namespace: zebrafish_anatomy def: "Simple columnar epithelium that lines the intestine, sometimes pseudostratified, with absorptive brush-border cells and mucous goblet cells clearly visible." [ZFIN:ZDB-PUB-050209-3] synonym: "intestine epithelium" EXACT [] synonym: "villous epithelium" EXACT [ZFIN:ZDB-PUB-090217-11] xref: TAO:0005124 xref: ZFIN:ZDB-ANAT-061211-26 is_a: ZFA:0001496 ! simple columnar epithelium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001338 ! intestine relationship: part_of ZFA:0005123 ! gut epithelium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005125 name: intestinal villus namespace: zebrafish_anatomy def: "The entire digestive tract is lined by well developed villi, which are longest in the intestinal bulb and decrease progressively in size towards the caudal end of the intestine." [ZFIN:ZDB-PUB-050209-3] synonym: "intestinal villi" EXACT PLURAL [] xref: TAO:0005125 xref: ZFIN:ZDB-ANAT-061211-27 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005124 ! intestinal epithelium relationship: start ZFS:0000037 ! Larval:Day 5 [Term] id: ZFA:0005126 name: intestinal bulb epithelium namespace: zebrafish_anatomy def: "Intestinal epithelium which lines the lumen of the intestinal bulb." [ZFIN:curator] xref: TAO:0005126 xref: ZFIN:ZDB-ANAT-061211-28 is_a: ZFA:0005124 ! intestinal epithelium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001076 ! intestinal bulb relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005127 name: mid intestine epithelium namespace: zebrafish_anatomy def: "Intestinal epithelium which lines the lumen of the mid intestine." [ZFIN:curator] xref: TAO:0005127 xref: ZFIN:ZDB-ANAT-061211-29 is_a: ZFA:0005124 ! intestinal epithelium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001323 ! mid intestine relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005128 name: posterior intestine epithelium namespace: zebrafish_anatomy def: "Intestinal epithelium which lines the lumen of the posterior intestine." [ZFIN:curator] xref: TAO:0005128 xref: ZFIN:ZDB-ANAT-061211-30 is_a: ZFA:0005124 ! intestinal epithelium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000706 ! posterior intestine relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005129 name: mesentery namespace: zebrafish_anatomy def: "A double layer composed of peritoneum that attaches the visceral organs to the body wall." [ZFIN:curator] xref: TAO:0005129 xref: ZFIN:ZDB-ANAT-070517-32 is_a: ZFA:0001486 ! epithelium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005120 ! peritoneum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005130 name: dorsal mesentery namespace: zebrafish_anatomy def: "The mesentery that originates from the dorsal side of the peritoneal cavity." [ZFIN:curator] xref: TAO:0005130 xref: ZFIN:ZDB-ANAT-070517-33 is_a: ZFA:0005129 ! mesentery relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005131 name: parietal peritoneum namespace: zebrafish_anatomy def: "The peritoneum that lines the walls of the peritoneal cavity." [ZFIN:curator] xref: TAO:0005131 xref: ZFIN:ZDB-ANAT-070517-34 is_a: ZFA:0005425 ! serous membrane relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005120 ! peritoneum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005132 name: visceral peritoneum namespace: zebrafish_anatomy def: "The part of peritoneum that is a serous membrane covers the external surfaces of most abdominal organs." [ZFIN:curator] synonym: "tunica serosa" RELATED [http:/www.vivo.colostate.edu/hbooks/pathphys/digestion/basics/gi_microanatomy.html] xref: TAO:0005132 xref: ZFIN:ZDB-ANAT-070517-35 is_a: ZFA:0005425 ! serous membrane relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005120 ! peritoneum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005133 name: ventral mesentery namespace: zebrafish_anatomy def: "The mesentery that originates from the ventral side of the peritoneal cavity." [ZFIN:curator] xref: TAO:0005133 xref: ZFIN:ZDB-ANAT-070517-36 is_a: ZFA:0005129 ! mesentery relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005134 name: dental epithelium namespace: zebrafish_anatomy def: "Epithelium that is part of a developing tooth or dental organ." [ZFIN:curator] synonym: "dental epithelia" EXACT PLURAL [] xref: TAO:0005134 xref: ZFIN:ZDB-ANAT-070517-37 is_a: ZFA:0001486 ! epithelium relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005135 name: primary dental epithelium namespace: zebrafish_anatomy def: "Epithelium that surrounds a primary tooth. This epithelium is committed to formation of replacement teeth." [ZFIN:curator] synonym: "pharyngeal tooth epithelium" EXACT [] synonym: "tooth epithelium" EXACT [] xref: TAO:0005135 xref: ZFIN:ZDB-ANAT-070517-38 is_a: ZFA:0005134 ! dental epithelium relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005136 name: inner dental epithelium namespace: zebrafish_anatomy def: "Inner layer of the dental organ, composed of ameloblasts." [ZFIN:curator] synonym: "inner enamel epithelium" EXACT [] xref: TAO:0005136 xref: ZFIN:ZDB-ANAT-070517-39 is_a: ZFA:0005134 ! dental epithelium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005138 ! dental organ relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005137 name: outer dental epithelium namespace: zebrafish_anatomy def: "Outer layer of the dental organ." [ZFIN:curator] xref: TAO:0005137 xref: ZFIN:ZDB-ANAT-070517-40 is_a: ZFA:0005134 ! dental epithelium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005138 ! dental organ relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005138 name: dental organ namespace: zebrafish_anatomy def: "A structure that is involved in tooth formation. A bell shape two layer epithelial structure that descends toward the ceratobranchial 5 bone, enclosing the dental mesenchyme. At later times in tooth development the cells at the apex of the bell may be involved in enameloid formation. This structure remains at the base of the erupted tooth and is the source of replacement teeth." [ZFIN:curator] synonym: "enamel organ" EXACT [] xref: TAO:0005138 xref: ZFIN:ZDB-ANAT-070517-41 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001153 ! tooth placode relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005139 name: dental mesenchyme namespace: zebrafish_anatomy def: "Mesenchyme enclosed by dental organ." [ZFIN:curator] xref: TAO:0005139 xref: ZFIN:ZDB-ANAT-070517-42 is_a: ZFA:0000113 ! head mesenchyme relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005138 ! dental organ relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005140 name: dental papilla namespace: zebrafish_anatomy def: "Tissue of the developing tooth. It is composed of pre-odontoblast and undiffentiated mesnchyme cells and connects to the basal lamina." [ZFIN:curator] synonym: "pharyngeal tooth mesenchyme" EXACT [] synonym: "tooth mesenchyme" EXACT [] xref: TAO:0005140 xref: ZFIN:ZDB-ANAT-070517-43 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0005139 ! dental mesenchyme relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005141 name: tooth pulp namespace: zebrafish_anatomy def: "Material in the center of the dentine of the mature tooth. In secondary teeth the pulp contains blood vessels and odontoblast." [ZFIN:curator] xref: TAO:0005141 xref: ZFIN:ZDB-ANAT-070517-44 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0005140 ! dental papilla relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000694 ! ceratobranchial 5 tooth relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005142 name: enameloid namespace: zebrafish_anatomy def: "A dentine-like hypermineralized substance that covers the zebrafish tooth tip." [ZFIN:curator] synonym: "enamel" EXACT [] xref: TAO:0005142 xref: ZFIN:ZDB-ANAT-070517-45 is_a: ZFA:0001487 ! portion of organism substance relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000694 ! ceratobranchial 5 tooth relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005143 name: dentine namespace: zebrafish_anatomy def: "Mineralized collagen containing substance that forms the tooth structure." [ZFIN:curator] xref: TAO:0005143 xref: ZFIN:ZDB-ANAT-070517-46 is_a: ZFA:0001487 ! portion of organism substance relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000694 ! ceratobranchial 5 tooth relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005144 name: ampullary nerve namespace: zebrafish_anatomy def: "Nerve that is a branch of cranial nerve VIII and innervates the cristae ampullaris." [ZFIN:curator] synonym: "ampullary nerves" EXACT PLURAL [] xref: TAO:0005144 xref: ZFIN:ZDB-ANAT-070517-47 is_a: ZFA:0007009 ! nerve relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000247 ! cranial nerve VIII relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005145 name: muscle namespace: zebrafish_anatomy def: "Portion of tissue composed of contractile fibers." [ZFIN:curator] synonym: "muscles" EXACT PLURAL [] xref: TAO:0005145 xref: ZFIN:ZDB-ANAT-070928-181 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000548 ! musculature system relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005146 name: area postrema namespace: zebrafish_anatomy def: "An area of medulla oblongata, outside the blood-brain barrier. The apical terminals of the neurons are, in a strategic location either to monitor the chemical constitution of the plasma or to release neurogenic substances into the general circulation." [ZFIN:ZDB-PUB-970602-2] xref: TAO:0005146 xref: ZFIN:ZDB-ANAT-070928-182 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000545 ! medulla oblongata relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005147 name: regenerating tissue namespace: zebrafish_anatomy def: "A portion of tissue that is regrowing after damage or amputation." [ZFIN:curator] synonym: "regenerating tissues" EXACT PLURAL [] xref: TAO:0005147 xref: ZFIN:ZDB-ANAT-070928-183 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005148 name: apical epidermal cap namespace: zebrafish_anatomy def: "Part of the regeneration epithelium closest to the fin." [ZFIN:curator] synonym: "apical epidermal caps" EXACT PLURAL [] xref: TAO:0005148 xref: ZFIN:ZDB-ANAT-070928-184 is_a: ZFA:0005147 ! regenerating tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001389 ! regeneration epithelium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005149 name: distal epidermal cap namespace: zebrafish_anatomy def: "Part of regeneration epithelium at the tip of the fin." [ZFIN:curator] synonym: "distal epidermal caps" EXACT PLURAL [] xref: TAO:0005149 xref: ZFIN:ZDB-ANAT-070928-185 is_a: ZFA:0005147 ! regenerating tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001389 ! regeneration epithelium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005150 name: basal regeneration epithelium namespace: zebrafish_anatomy def: "Layer of the wound epidermis that surrounds the blastema." [ZFIN:curator] synonym: "basal wound epidermis" EXACT [] xref: TAO:0005150 xref: ZFIN:ZDB-ANAT-070928-186 is_a: ZFA:0005147 ! regenerating tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001389 ! regeneration epithelium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005151 name: gold iridophore namespace: zebrafish_anatomy def: "Iridescent iridophore containing gold reflecting platelets." [ZFIN:curator] xref: TAO:0005151 xref: ZFIN:ZDB-ANAT-090922-193 is_a: ZFA:0009199 ! iridophore relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000032 ! Pharyngula:High-pec created_by: Ceri creation_date: 2009-03-12T12:34:16Z [Term] id: ZFA:0005152 name: silver iridophore namespace: zebrafish_anatomy def: "Iridescent iridophore containing silver reflecting platelets." [ZFIN:curator] xref: TAO:0005152 xref: ZFIN:ZDB-ANAT-090922-194 is_a: ZFA:0009199 ! iridophore relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000032 ! Pharyngula:High-pec created_by: Ceri creation_date: 2009-03-12T12:48:18Z [Term] id: ZFA:0005153 name: synovial joint namespace: zebrafish_anatomy def: "Is a joint that is located at the point of contact of articulating bones allowing movement. The joint has a capsule containing synovial fluid surrounding the articulating bone surfaces." [ZFIN:Curator] synonym: "diarthrodial joints" RELATED [] synonym: "diarthroses" EXACT [] xref: TAO:0005153 xref: ZFIN:ZDB-ANAT-090922-195 is_a: ZFA:0001596 ! joint relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-03-12T01:31:49Z [Term] id: ZFA:0005154 name: synovial fluid namespace: zebrafish_anatomy def: "Portion of organism substance that is a clear fluid that occupies the space in synovial joints." [ZFIN:curator] xref: TAO:0005154 xref: ZFIN:ZDB-ANAT-090922-196 is_a: ZFA:0001487 ! portion of organism substance relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005153 ! synovial joint relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-03-12T01:42:07Z [Term] id: ZFA:0005155 name: cartilaginous joint namespace: zebrafish_anatomy def: "Is a joint where the ends of two bones are connected by cartilage." [ZFIN:curator] xref: TAO:0005155 xref: ZFIN:ZDB-ANAT-090922-197 is_a: ZFA:0001596 ! joint relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-03-12T01:52:52Z [Term] id: ZFA:0005156 name: fibrous joint namespace: zebrafish_anatomy def: "A joint where fibrous tissue such as ligament connects two calcified tissues." [ZFIN:curator] xref: TAO:0005156 xref: ZFIN:ZDB-ANAT-090922-198 is_a: ZFA:0001596 ! joint relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-03-12T01:54:12Z [Term] id: ZFA:0005157 name: tela chorioidea tectal ventricle namespace: zebrafish_anatomy def: "Tela chorioidea that lines the tectal ventricle." [ZFIN:curator] synonym: "tela choroidea tectal ventricle" EXACT [] xref: TAO:0005157 xref: ZFIN:ZDB-ANAT-090922-199 is_a: ZFA:0000447 ! tela chorioidea relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000159 ! tectal ventricle relationship: start ZFS:0000029 ! Pharyngula:Prim-5 created_by: Ceri creation_date: 2009-04-02T01:30:05Z [Term] id: ZFA:0005158 name: tela chorioidea fourth ventricle namespace: zebrafish_anatomy def: "Tela chorioidea that lines the fourth ventricle." [ZFIN:curator] synonym: "tela choroidea fourth ventricle" EXACT [] xref: TAO:0005158 xref: ZFIN:ZDB-ANAT-090922-200 is_a: ZFA:0000447 ! tela chorioidea relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000110 ! fourth ventricle relationship: start ZFS:0000029 ! Pharyngula:Prim-5 created_by: Ceri creation_date: 2009-04-02T01:40:34Z [Term] id: ZFA:0005159 name: tela chorioidea third ventricle namespace: zebrafish_anatomy def: "Tela chorioidea that lines the third ventricle." [ZFIN:curator] synonym: "tela choroidea third ventricle" EXACT [] xref: TAO:0005159 xref: ZFIN:ZDB-ANAT-090922-201 is_a: ZFA:0000447 ! tela chorioidea relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000161 ! third ventricle relationship: start ZFS:0000029 ! Pharyngula:Prim-5 created_by: Ceri creation_date: 2009-04-02T02:04:56Z [Term] id: ZFA:0005160 name: tela chorioidea telencephalic ventricle namespace: zebrafish_anatomy def: "Tela chorioidea that lines the telencephalic ventricle." [ZFIN:curator] synonym: "tela choroidea telencephalic ventricle" EXACT [] xref: TAO:0005160 xref: ZFIN:ZDB-ANAT-090922-202 is_a: ZFA:0000447 ! tela chorioidea relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000696 ! telencephalic ventricle relationship: start ZFS:0000029 ! Pharyngula:Prim-5 created_by: Ceri creation_date: 2009-04-02T02:20:33Z [Term] id: ZFA:0005161 name: hepatic artery namespace: zebrafish_anatomy def: "Artery that supplies blood to the liver." [ZFIN:curator] xref: TAO:0005161 xref: ZFIN:ZDB-ANAT-090922-203 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000123 ! liver relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-04-20T03:43:46Z [Term] id: ZFA:0005162 name: digestive system duct namespace: zebrafish_anatomy def: "Ducts that transport enzymes between organs in the digestive system." [ZFIN:curator] xref: TAO:0005162 xref: ZFIN:ZDB-ANAT-090922-204 is_a: ZFA:0005171 ! duct relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000339 ! digestive system relationship: start ZFS:0000025 ! Segmentation:10-13 somites created_by: Ceri creation_date: 2009-04-20T04:51:36Z [Term] id: ZFA:0005163 name: bile canaliculus namespace: zebrafish_anatomy def: "Intercellular space surrounded by the basal surface of the hepatocytes that collect bile." [ZFIN:Curator] comment: Should be located in rather then part_of when we get the appropriate relation. xref: TAO:0005163 xref: ZFIN:ZDB-ANAT-090922-205 is_a: ZFA:0001643 ! anatomical space relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000123 ! liver relationship: start ZFS:0000035 ! Larval:Protruding-mouth created_by: Ceri creation_date: 2009-04-20T05:33:42Z [Term] id: ZFA:0005164 name: bile ductule namespace: zebrafish_anatomy def: "Digestive system duct that collects bile from the canaliculus and transports bile through the liver." [ZFIN:Curator] xref: TAO:0005164 xref: ZFIN:ZDB-ANAT-090922-206 is_a: ZFA:0005162 ! digestive system duct relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000123 ! liver relationship: start ZFS:0000035 ! Larval:Protruding-mouth created_by: Ceri creation_date: 2009-04-20T05:39:12Z [Term] id: ZFA:0005165 name: common bile duct namespace: zebrafish_anatomy def: "Digestive system duct that collects bile from the hepatic bile duct and the cystic duct." [ZFIN:Curator] xref: TAO:0005165 xref: ZFIN:ZDB-ANAT-090922-207 is_a: ZFA:0005162 ! digestive system duct relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001100 ! hepatic duct relationship: start ZFS:0000035 ! Larval:Protruding-mouth created_by: Ceri creation_date: 2009-04-20T05:43:23Z [Term] id: ZFA:0005166 name: cystic duct namespace: zebrafish_anatomy def: "Duct that connects the gall bladder and the common bile duct." [ZFIN:Curator] xref: TAO:0005166 xref: ZFIN:ZDB-ANAT-090922-208 is_a: ZFA:0005162 ! digestive system duct relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000036 ! liver and biliary system relationship: start ZFS:0000035 ! Larval:Protruding-mouth created_by: Ceri creation_date: 2009-04-20T05:56:39Z [Term] id: ZFA:0005167 name: hepatopancreatic ampulla namespace: zebrafish_anatomy def: "Ampulla formed by the union of the pancreatic duct and the common bile duct where they enter the intestine." [ZFIN:ZDB-PUB-070212-11, ZFIN:ZDB-PUB-080414-12] synonym: "ampulla of Vater" EXACT [] synonym: "papilla duodeni major" RELATED [] synonym: "papilla Vateri" EXACT [] xref: TAO:0005167 xref: ZFIN:ZDB-ANAT-090922-209 is_a: ZFA:0005162 ! digestive system duct relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000339 ! digestive system relationship: start ZFS:0000035 ! Larval:Protruding-mouth created_by: Ceri creation_date: 2009-04-20T05:59:27Z [Term] id: ZFA:0005168 name: central vein namespace: zebrafish_anatomy def: "Vein that is central to a lobule in the liver." [ZFIN:curator] xref: TAO:0005168 xref: ZFIN:ZDB-ANAT-090922-210 is_a: ZFA:0000082 ! vein relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000123 ! liver relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-04-21T02:46:13Z [Term] id: ZFA:0005169 name: intrahepatic bile duct namespace: zebrafish_anatomy def: "Duct that collects bile from the bile ductules and connects to the extrahepatic bile duct." [ZFIN:curator] xref: TAO:0005169 xref: ZFIN:ZDB-ANAT-090922-211 is_a: ZFA:0005162 ! digestive system duct relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000123 ! liver relationship: start ZFS:0000035 ! Larval:Protruding-mouth created_by: Ceri creation_date: 2009-04-27T04:19:40Z [Term] id: ZFA:0005170 name: extrahepatic duct namespace: zebrafish_anatomy def: "Bile duct that collects from the intrahepatic ducts and feeds into the common bile duct." [ZFIN:curator] xref: TAO:0005170 xref: ZFIN:ZDB-ANAT-090922-212 is_a: ZFA:0005162 ! digestive system duct relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001100 ! hepatic duct relationship: start ZFS:0000035 ! Larval:Protruding-mouth created_by: Ceri creation_date: 2009-04-27T04:26:36Z [Term] id: ZFA:0005171 name: duct namespace: zebrafish_anatomy def: "A tube shaped portion of tissue lined with epithelial cells that collects secretions and routes them to their destination." [ZFIN:Curator] xref: TAO:0005171 xref: ZFIN:ZDB-ANAT-090922-213 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-04-27T04:45:59Z [Term] id: ZFA:0005172 name: left liver lobe namespace: zebrafish_anatomy def: "Portion of the liver which develops on the fish's left side." [ZFIN:curator] synonym: "1st lobe" EXACT [] synonym: "first lobe" EXACT [] xref: TAO:0005172 xref: ZFIN:ZDB-ANAT-090922-214 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000123 ! liver relationship: start ZFS:0000033 ! Hatching:Long-pec created_by: Ceri creation_date: 2009-04-27T05:51:33Z [Term] id: ZFA:0005173 name: right liver lobe namespace: zebrafish_anatomy def: "Portion of the liver which develops on the fish's right side adjacent to the gall bladder." [ZFIN:curator] synonym: "2nd lobe" EXACT [] synonym: "gall bladder lobe" EXACT [] synonym: "second lobe" EXACT [] xref: TAO:0005173 xref: ZFIN:ZDB-ANAT-090922-215 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000123 ! liver relationship: start ZFS:0000035 ! Larval:Protruding-mouth created_by: Ceri creation_date: 2009-04-27T05:59:16Z [Term] id: ZFA:0005174 name: ventral liver lobe namespace: zebrafish_anatomy def: "Portion of the liver which develops on the fish's ventral side." [ZFIN:curator] synonym: "3rd lobe" EXACT [] synonym: "third lobe" EXACT [] xref: TAO:0005174 xref: ZFIN:ZDB-ANAT-090922-216 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000123 ! liver relationship: start ZFS:0000040 ! Larval:Days 14-20 created_by: Ceri creation_date: 2009-04-27T06:04:51Z [Term] id: ZFA:0005175 name: CoPA namespace: zebrafish_anatomy def: "An interneuron in the spinal cord. CoPA are bipolar with \"T\" shaped dorsal dendrites, have contralateral longitudinal axons that crosses the cord dorsal to the Mauthner neuron and ascends in the dorsal cord." [ZFIN:ZDB-PUB-010807-17, ZFIN:ZDB-PUB-961014-274, ZFIN:ZDB-PUB-961014-649] comment: This term is a leaf node in the zebrafish AO and is not in the CL. synonym: "primary commissural interneuron" EXACT [] xref: TAO:0005175 xref: ZFIN:ZDB-ANAT-090922-217 is_a: ZFA:0000778 ! spinal cord interneuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000026 ! Segmentation:14-19 somites created_by: Ceri creation_date: 2009-06-18T01:41:54Z [Term] id: ZFA:0005176 name: CoSA namespace: zebrafish_anatomy def: "An interneuron of the spinal cord. CoSA, have contralateral longitudinal axons that crosses the cord dorsal to the Mauthner neuron and ascends in the dorsal cord." [ZFIN:ZDB-PUB-010807-17, ZFIN:ZDB-PUB-961014-649] comment: This term is a leaf node in the zebrafish AO and is not in the CL. synonym: "secondary commissural interneuron" EXACT [] xref: TAO:0005176 xref: ZFIN:ZDB-ANAT-090922-218 is_a: ZFA:0000778 ! spinal cord interneuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000026 ! Segmentation:14-19 somites created_by: Ceri creation_date: 2009-06-18T02:07:49Z [Term] id: ZFA:0005177 name: VeLD namespace: zebrafish_anatomy def: "An interneuron of the spinal cord. VeLD neurons have an ipsilateral longitudinal axon." [ZFIN:ZDB-PUB-961014-649] comment: This term is a leaf node in the zebrafish AO and is not in the CL. synonym: "V2b interneuron" RELATED [] synonym: "ventral longitudinal interneuron" EXACT [] xref: TAO:0005177 xref: ZFIN:ZDB-ANAT-090922-219 is_a: ZFA:0000778 ! spinal cord interneuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000026 ! Segmentation:14-19 somites created_by: Ceri creation_date: 2009-06-18T02:14:18Z [Term] id: ZFA:0005178 name: DoLA namespace: zebrafish_anatomy def: "An interneuron of the spinal cord." [ZFIN:ZDB-PUB-961014-649] comment: This term is a leaf node in the zebrafish AO and is not in the CL. synonym: "dorsal longitudinal interneuron" EXACT [] xref: TAO:0005178 xref: ZFIN:ZDB-ANAT-090922-220 is_a: ZFA:0000778 ! spinal cord interneuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000026 ! Segmentation:14-19 somites created_by: Ceri creation_date: 2009-06-18T02:21:58Z [Term] id: ZFA:0005179 name: MiP motor neuron namespace: zebrafish_anatomy def: "A primary motor neuron that is part of the spinal cord. The axon turns caudally and dorsally, coursing between the surface of the spinal cord and the medial surface of the axial muscles to the dorsal median septum. The MiP axon then extends dorsally to the surface of the muscle, where it turns to arborize ventrally over the lateral surface of the axial muscle." [ZFIN:ZDB-PUB-961014-1247, ZFIN:ZDB-PUB-961014-272, ZFIN:ZDB-PUB-961014-814] comment: This term is a leaf node in the zebrafish AO and is not in the CL. synonym: "middle primary motoneuron" EXACT [] xref: TAO:0005179 xref: ZFIN:ZDB-ANAT-090922-221 is_a: ZFA:0009244 ! primary motor neuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000026 ! Segmentation:14-19 somites created_by: Ceri creation_date: 2009-06-18T04:02:28Z [Term] id: ZFA:0005180 name: RoP motor neuron namespace: zebrafish_anatomy def: "A primary motoneuron that is part of the spinal cord. The axon of the CaP motoneuron on emerging from the ventral root. At the horizontal septum, however, the RoP axon turns laterally to extend within the horizontal septum to the lateral surface of the muscle." [ZFIN:ZDB-PUB-961014-1247, ZFIN:ZDB-PUB-961014-272, ZFIN:ZDB-PUB-961014-814] comment: This term is a leaf node in the zebrafish AO and is not in the CL. synonym: "rostral primary motoneuron" EXACT [] xref: TAO:0005180 xref: ZFIN:ZDB-ANAT-090922-222 is_a: ZFA:0009244 ! primary motor neuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000026 ! Segmentation:14-19 somites created_by: Ceri creation_date: 2009-06-18T04:05:40Z [Term] id: ZFA:0005181 name: VaP motor neuron namespace: zebrafish_anatomy def: "A primary motor neuron of the spinal cord. This cell is present in slightly less than half of the trunk hemisegments. Additionally, this cell has at least 2 different fates: it may become a primary motoneuron and arborize in an exclusive muscle territory, or it may die during embryonic development." [ZFIN:ZDB-PUB-961014-265, ZFIN:ZDB-PUB-961014-276] comment: This term is a leaf node in the zebrafish AO and is not in the CL. synonym: "variable primary motoneuron" EXACT [] xref: TAO:0005181 xref: ZFIN:ZDB-ANAT-090922-223 is_a: ZFA:0009244 ! primary motor neuron relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000026 ! Segmentation:14-19 somites created_by: Ceri creation_date: 2009-06-18T04:38:21Z [Term] id: ZFA:0005182 name: t-interneuron namespace: zebrafish_anatomy def: "Hindbrain interneuron that is located in the caudal hindbrain. The T interneurons are reticular neurons named after the branching pattern of their axons. The T axons project across the midline, and branches course both rostrally and caudally within the medial longitudinal fascicle (mlf). The cells receive synaptic input from the Mauthner neurons, from unidentified axons in the mlf, and perhaps from trigeminal sensory fibers. They project to cranial and pectoral motor nuclei." [ZFIN:ZDB-PUB-961014-588] comment: This term is a leaf node in the zebrafish AO and is not in the CL. xref: TAO:0005182 xref: ZFIN:ZDB-ANAT-090922-224 is_a: ZFA:0005209 ! hindbrain interneuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-06-18T04:44:30Z [Term] id: ZFA:0005183 name: MiD2i namespace: zebrafish_anatomy def: "Hindbrain interneuron that is part of rhombomere 5 with one dorsal neuron in each hemi-rhombomere. The axonal projection is ipsilateral." [ZFIN:ZDB-PUB-961014-770] comment: This term is a leaf node in the zebrafish AO and is not in the CL synonym: "middle dorsal 2 ipsilateral interneuron " EXACT [] xref: TAO:0005183 xref: ZFIN:ZDB-ANAT-090922-225 is_a: ZFA:0005209 ! hindbrain interneuron relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000823 ! rhombomere 5 relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-06-18T05:05:22Z [Term] id: ZFA:0005184 name: MiD2cl namespace: zebrafish_anatomy def: "Hindbrain interneuron, part of rhombomere 5, with one dorsal, caudal-lateral neuron in each hemi-rhombomere. The fibers pass through the lateral longitudinal fasciculus." [ZFIN:ZDB-PUB-961014-770] comment: This term is a leaf node in the zebrafish AO and is not in the CL synonym: "middle dorsal 2 contralateral llf interneuron " EXACT [] xref: TAO:0005184 xref: ZFIN:ZDB-ANAT-090922-226 is_a: ZFA:0005209 ! hindbrain interneuron relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000823 ! rhombomere 5 relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-06-18T05:16:33Z [Term] id: ZFA:0005185 name: MiD2cm namespace: zebrafish_anatomy def: "Hindbrain interneuron, part of rhombomere 5, with one dorsal, caudal-medial neuron in each hemi-rhombomere. The fibers pass through the medial longitudinal fasciculus." [ZFIN:ZDB-PUB-961014-770] comment: This term is a leaf node in the zebrafish AO and is not in the CL synonym: "middle dorsal 2 contralateral mlf interneuron " EXACT [] xref: TAO:0005185 xref: ZFIN:ZDB-ANAT-090922-227 is_a: ZFA:0005209 ! hindbrain interneuron relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000823 ! rhombomere 5 relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-06-18T05:18:53Z [Term] id: ZFA:0005186 name: CoB namespace: zebrafish_anatomy def: "A bifurcate interneuron. It is a commissural neuron with both ascending and descending axons in the ventrolateral cord contralateral to its cell body." [ZFIN:ZDB-PUB-961014-649] comment: This term is a leaf node in the zebrafish AO and is not in the CL.\n\nThis may be the same as CoBL synonym: "bifurcate commissural interneuron" EXACT [] xref: TAO:0005186 xref: ZFIN:ZDB-ANAT-090922-228 is_a: ZFA:0005231 ! bifurcate interneuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-06-23T11:38:16Z [Term] id: ZFA:0005187 name: MiM1 namespace: zebrafish_anatomy def: "Hindbrain interneuron that is part of rhombomere 4, with one medial neuron in each hemi-rhombomere." [ZFIN:ZDB-PUB-961014-770] synonym: "middle medial interneuron " EXACT [] xref: TAO:0005187 xref: ZFIN:ZDB-ANAT-090922-229 is_a: ZFA:0005209 ! hindbrain interneuron relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001032 ! rhombomere 4 relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-06-23T12:31:49Z [Term] id: ZFA:0005188 name: MiR1 namespace: zebrafish_anatomy def: "Hindbrain interneuron that is part of rhombomere 4 with one rostral neuron in each hemi-rhombomere." [ZFIN:ZDB-PUB-961014-770] synonym: "middle rostral 1 interneuron " EXACT [] xref: TAO:0005188 xref: ZFIN:ZDB-ANAT-090922-230 is_a: ZFA:0005209 ! hindbrain interneuron relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001032 ! rhombomere 4 relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-06-23T12:33:39Z [Term] id: ZFA:0005189 name: MiR2 namespace: zebrafish_anatomy def: "Hindbrain interneuron that is part of rhombomere 5 with one rostral neuron in each hemi-rhombomere." [ZFIN:ZDB-PUB-961014-770] synonym: "middle rostral 2 interneuron " EXACT [] xref: TAO:0005189 xref: ZFIN:ZDB-ANAT-090922-231 is_a: ZFA:0005209 ! hindbrain interneuron relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000823 ! rhombomere 5 relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-06-23T12:40:02Z [Term] id: ZFA:0005190 name: MiV1 namespace: zebrafish_anatomy def: "Hindbrain interneuron that is part of rhombomere 4 with six ventral neurons in each hemi-rhombomere." [ZFIN:ZDB-PUB-961014-770] synonym: "middle ventral 1 neuron " EXACT [] xref: TAO:0005190 xref: ZFIN:ZDB-ANAT-090922-232 is_a: ZFA:0005209 ! hindbrain interneuron relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001032 ! rhombomere 4 relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-06-23T01:10:53Z [Term] id: ZFA:0005191 name: MiV2 namespace: zebrafish_anatomy def: "Hindbrain interneuron that is part of rhombomere 5 with five ventral neurons in each hemi-rhombomere." [ZFIN:ZDB-PUB-961014-770] synonym: "middle ventral 2 neuron " EXACT [] xref: TAO:0005191 xref: ZFIN:ZDB-ANAT-090922-233 is_a: ZFA:0005209 ! hindbrain interneuron relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000823 ! rhombomere 5 relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-06-23T01:15:56Z [Term] id: ZFA:0005192 name: RoI2C namespace: zebrafish_anatomy def: "Hindbrain interneuron that is part of rhombomere 2 with two intermediate-caudal neurons in each hemi-rhombomere." [ZFIN:ZDB-PUB-961014-770] synonym: "rostral intermediate 2 caudal interneuron " EXACT [] xref: TAO:0005192 xref: ZFIN:ZDB-ANAT-090922-234 is_a: ZFA:0005209 ! hindbrain interneuron relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000822 ! rhombomere 2 relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-06-23T02:39:18Z [Term] id: ZFA:0005193 name: RoI2R namespace: zebrafish_anatomy def: "Hindbrain interneuron that is part of rhombomere 2 with one intermediate-rostral neuron in each hemi-rhombomere." [ZFIN:ZDB-PUB-961014-770] synonym: "rostral intermediate 2 rostral interneuron " EXACT [] xref: TAO:0005193 xref: ZFIN:ZDB-ANAT-090922-235 is_a: ZFA:0005209 ! hindbrain interneuron relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000822 ! rhombomere 2 relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-06-23T03:08:46Z [Term] id: ZFA:0005194 name: RoL1 namespace: zebrafish_anatomy def: "Hindbrain interneuron that is part of rhombomere 1 with twelve neurons in each hemi-rhombomere. Axon runs in the dorsal spinal cord. The RoL1 stem axon projects ipsilaterally along the brain stem and spinal cord. From the more lateral location of its spinal axon, RoL1's collaterals projected both ventrally and medially. The branching of RoL1 collaterals within the medulla, occur at multiple levels." [ZFIN:ZDB-PUB-030319-6, ZFIN:ZDB-PUB-961014-770] comment: May have 12 neurons in each hemi rhombomere ZDB-PUB-060217-9\n7 neurons in each hemi rhombomere 080227-17 and 931014-770 synonym: "rostral lateral 1 interneuron " EXACT [] xref: TAO:0005194 xref: ZFIN:ZDB-ANAT-090922-236 is_a: ZFA:0005209 ! hindbrain interneuron relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001031 ! rhombomere 1 relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-06-23T03:22:51Z [Term] id: ZFA:0005195 name: MiD3cl namespace: zebrafish_anatomy def: "Hindbrain interneuron, part of rhombomere 6, with one caudal-lateral neuron in each hemi-rhombomere. The fibers pass through the lateral longitudinal fasciculus." [ZFIN:ZDB-PUB-961014-770] comment: This term is a leaf node in the zebrafish AO and is not in the CL. synonym: "middle dorsal 3 contralateral llf interneuron " EXACT [] xref: TAO:0005195 xref: ZFIN:ZDB-ANAT-090922-237 is_a: ZFA:0005209 ! hindbrain interneuron relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000069 ! rhombomere 6 relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-06-22T05:10:40Z [Term] id: ZFA:0005196 name: MiD3cm namespace: zebrafish_anatomy def: "Hindbrain interneuron, part of rhombomere 6, with one caudal-medial neuron in each hemi-rhombomere. The fibers pass through the medial longitudinal fasciculus." [ZFIN:ZDB-PUB-961014-770] comment: This term is a leaf node in the zebrafish AO and is not in the CL. synonym: "middle dorsal 3 contralateral mlf interneuron " EXACT [] xref: TAO:0005196 xref: ZFIN:ZDB-ANAT-090922-238 is_a: ZFA:0005209 ! hindbrain interneuron relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000069 ! rhombomere 6 relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-06-22T05:13:02Z [Term] id: ZFA:0005197 name: MiD3i namespace: zebrafish_anatomy def: "Hindbrain interneuron that is part of rhombomere 6 with one dorsal neuron in each hemi-rhombomere. The axonal projection is ipsilateral." [ZFIN:ZDB-PUB-961014-770] comment: This term is a leaf node in the zebrafish AO and is not in the CL. synonym: "middle dorsal 3 ipsilateral interneuron " EXACT [] xref: TAO:0005197 xref: ZFIN:ZDB-ANAT-090922-239 is_a: ZFA:0005209 ! hindbrain interneuron relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000069 ! rhombomere 6 relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-06-22T05:15:04Z [Term] id: ZFA:0005198 name: RoL2 namespace: zebrafish_anatomy def: "Hindbrain interneuron that is part of rhombomere 2 with 4 lateral neurons in each hemi-rhombomere." [ZFIN:ZDB-PUB-961014-770] synonym: "rostral lateral 2 interneuron " EXACT [] xref: TAO:0005198 xref: ZFIN:ZDB-ANAT-090922-240 is_a: ZFA:0005209 ! hindbrain interneuron relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000822 ! rhombomere 2 relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-06-26T04:33:20Z [Term] id: ZFA:0005199 name: RoL2r namespace: zebrafish_anatomy def: "A RoL2 interneuron that is part of rhombomere 2." [ZFIN:ZDB-PUB-090217-9] synonym: "rostral lateral 2 rostral interneuron " EXACT [] xref: TAO:0005199 xref: ZFIN:ZDB-ANAT-090922-241 is_a: ZFA:0005198 ! RoL2 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000822 ! rhombomere 2 relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-06-26T04:48:39Z [Term] id: ZFA:0005200 name: RoL2c namespace: zebrafish_anatomy def: "A RoL2 interneuron that is part of rhombomere 2." [ZFIN:ZDB-PUB-090217-9] synonym: "rostral lateral 2 caudal interneuron " EXACT [] xref: TAO:0005200 xref: ZFIN:ZDB-ANAT-090922-242 is_a: ZFA:0005198 ! RoL2 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000822 ! rhombomere 2 relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-06-26T04:49:28Z [Term] id: ZFA:0005201 name: RoL3 namespace: zebrafish_anatomy def: "Hindbrain interneuron that is part of rhombomere 3 with 1 lateral neuron in each hemi-rhombomere." [ZFIN:ZDB-PUB-961014-770] synonym: "rostral lateral 3 interneuron " EXACT [] xref: TAO:0005201 xref: ZFIN:ZDB-ANAT-090922-243 is_a: ZFA:0005209 ! hindbrain interneuron relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000948 ! rhombomere 3 relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-06-26T05:06:36Z [Term] id: ZFA:0005202 name: RoM1c namespace: zebrafish_anatomy def: "Hindbrain interneuron that is part of rhombomere 1 with one medial-caudal neuron in each hemi-rhombomere." [ZFIN:ZDB-PUB-961014-770] synonym: "rostral medial 1 caudal interneuron " EXACT [] xref: TAO:0005202 xref: ZFIN:ZDB-ANAT-090922-244 is_a: ZFA:0005209 ! hindbrain interneuron relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001031 ! rhombomere 1 relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-06-26T05:08:26Z [Term] id: ZFA:0005203 name: RoM1r namespace: zebrafish_anatomy def: "Hindbrain interneuron that is part of rhombomere 1 with one medial-rostral neuron in each hemi-rhombomere." [ZFIN:ZDB-PUB-961014-770] synonym: "rostral medial 1 rostral interneuron " EXACT [] xref: TAO:0005203 xref: ZFIN:ZDB-ANAT-090922-245 is_a: ZFA:0005209 ! hindbrain interneuron relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001031 ! rhombomere 1 relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-06-26T05:09:50Z [Term] id: ZFA:0005204 name: RoV3 namespace: zebrafish_anatomy def: "Hindbrain interneuron that is part of rhombomere 3 with three ventral neurons in each hemi-rhombomere." [ZFIN:ZDB-PUB-961014-770] synonym: "rostral ventral 3 interneuron " EXACT [] xref: ZFIN:ZDB-ANAT-090922-246 is_a: ZFA:0005209 ! hindbrain interneuron relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000948 ! rhombomere 3 relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-06-29T02:14:08Z [Term] id: ZFA:0005205 name: RoM2l namespace: zebrafish_anatomy def: "Hindbrain interneuron that is part of rhombomere 2 with one medial-lateral neuron in each hemi-rhombomere." [ZFIN:ZDB-PUB-961014-770] synonym: "rostral medial 2 lateral interneuron " EXACT [] xref: TAO:0005205 xref: ZFIN:ZDB-ANAT-090922-247 is_a: ZFA:0005209 ! hindbrain interneuron relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000822 ! rhombomere 2 relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-06-29T02:43:42Z [Term] id: ZFA:0005206 name: RoM2m namespace: zebrafish_anatomy def: "Hindbrain interneuron that is part of rhombomere 2 with one medial neuron in each hemi-rhombomere." [ZFIN:ZDB-PUB-961014-770] synonym: "rostral medial 2 medial interneuron " EXACT [] xref: TAO:0005206 xref: ZFIN:ZDB-ANAT-090922-248 is_a: ZFA:0005209 ! hindbrain interneuron relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000822 ! rhombomere 2 relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-06-29T02:45:01Z [Term] id: ZFA:0005207 name: RoM3l namespace: zebrafish_anatomy def: "Hindbrain interneuron that is part of rhombomere 3 with one lateral neuron in each hemi-rhombomere." [ZFIN:ZDB-PUB-961014-770] synonym: "rostral medial 3 lateral interneuron " EXACT [] xref: TAO:0005207 xref: ZFIN:ZDB-ANAT-090922-249 is_a: ZFA:0005209 ! hindbrain interneuron relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000948 ! rhombomere 3 relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-06-29T02:46:19Z [Term] id: ZFA:0005208 name: RoM3m namespace: zebrafish_anatomy def: "Hindbrain interneuron that is part of rhombomere 32 with two medial neurons in each hemi-rhombomere." [ZFIN:ZDB-PUB-961014-770] synonym: "rostral medial 3 medial interneuron " RELATED [] xref: TAO:0005208 xref: ZFIN:ZDB-ANAT-090922-250 is_a: ZFA:0005209 ! hindbrain interneuron relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000948 ! rhombomere 3 relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-06-29T02:52:04Z [Term] id: ZFA:0005209 name: hindbrain interneuron namespace: zebrafish_anatomy def: "Is a CNS interneuron that is part of the hindbrain." [ZFIN:Curator] xref: TAO:0005209 xref: ZFIN:ZDB-ANAT-090922-251 is_a: ZFA:0009191 ! CNS interneuron relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000029 ! hindbrain relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-07-08T10:21:27Z [Term] id: ZFA:0005210 name: midbrain interneuron namespace: zebrafish_anatomy def: "CNS interneurons located in the midbrain." [ZFIN:Curator] xref: TAO:0005210 xref: ZFIN:ZDB-ANAT-090922-252 is_a: ZFA:0009191 ! CNS interneuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-07-08T11:14:28Z [Term] id: ZFA:0005211 name: MeL namespace: zebrafish_anatomy def: "Midbrain interneuron in the lateral midbrain." [ZFIN:ZDB-PUB-961014-758] synonym: "mesencephalon lateral interneuron" EXACT [] xref: TAO:0005211 xref: ZFIN:ZDB-ANAT-090922-253 is_a: ZFA:0005210 ! midbrain interneuron relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000128 ! midbrain relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-07-08T12:35:19Z [Term] id: ZFA:0005212 name: MeM namespace: zebrafish_anatomy def: "Midbrain interneuron located in the medial midbrain." [ZFIN:ZDB-PUB-961014-758] synonym: "mesencephalon medial interneuron" EXACT [] xref: TAO:0005212 xref: ZFIN:ZDB-ANAT-090922-254 is_a: ZFA:0005210 ! midbrain interneuron relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000128 ! midbrain relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-07-08T01:05:12Z [Term] id: ZFA:0005213 name: MeLr namespace: zebrafish_anatomy def: "Midbrain interneuron at the rostral position in the lateral midbrain." [ZFIN:ZDB-PUB-090217-9] synonym: "mesencephalon lateral rostral interneuron" EXACT [] xref: TAO:0005213 xref: ZFIN:ZDB-ANAT-090922-255 is_a: ZFA:0005210 ! midbrain interneuron relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000128 ! midbrain relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-07-08T01:26:45Z [Term] id: ZFA:0005214 name: MeLc namespace: zebrafish_anatomy def: "Midbrain interneuron at the caudal position in the lateral midbrain." [ZFIN:ZDB-PUB-090217-9] synonym: "mesencephalon lateral caudal interneuron" EXACT [] xref: TAO:0005214 xref: ZFIN:ZDB-ANAT-090922-256 is_a: ZFA:0005210 ! midbrain interneuron relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000128 ! midbrain relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-07-08T01:29:37Z [Term] id: ZFA:0005215 name: MeLm namespace: zebrafish_anatomy def: "Midbrain interneuron at the medial position in the lateral midbrain." [ZFIN:ZDB-PUB-090217-9] synonym: "mesencephalon lateral medial interneuron" EXACT [] xref: TAO:0005215 xref: ZFIN:ZDB-ANAT-090922-257 is_a: ZFA:0005210 ! midbrain interneuron relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000128 ! midbrain relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-07-09T02:21:45Z [Term] id: ZFA:0005216 name: MeM1 namespace: zebrafish_anatomy def: "Midbrain interneuron located in the medial midbrain." [ZFIN:ZDB-PUB-090217-9] synonym: "mesencephalon medial 1 interneuron" EXACT [] xref: TAO:0005216 xref: ZFIN:ZDB-ANAT-090922-258 is_a: ZFA:0005210 ! midbrain interneuron relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000128 ! midbrain relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-07-09T02:23:47Z [Term] id: ZFA:0005217 name: CaV namespace: zebrafish_anatomy def: "Hindbrain interneuron that is part of rhombomere 7, with 2 ventral neurons in each hemi-rhombomere." [ZFIN:ZDB-PUB-961014-770] synonym: "caudal ventral interneuron" EXACT [] xref: TAO:0005217 xref: ZFIN:ZDB-ANAT-090922-259 is_a: ZFA:0005209 ! hindbrain interneuron relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000949 ! rhombomere 7 relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-07-09T02:33:31Z [Term] id: ZFA:0005218 name: CaD namespace: zebrafish_anatomy def: "Hindbrain interneuron that is part of rhombomere 7, with 1 dorsal neuron in each hemi-rhombomere." [ZFIN:ZDB-PUB-961014-770] synonym: "caudal dorsal interneuron" EXACT [] xref: TAO:0005218 xref: ZFIN:ZDB-ANAT-090922-260 is_a: ZFA:0005209 ! hindbrain interneuron relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000949 ! rhombomere 7 relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-07-09T02:42:52Z [Term] id: ZFA:0005219 name: choroid plexus vascular circuit namespace: zebrafish_anatomy def: "Cranial vasculature where the posterior cerebral veins and the trans-choroid plexus branch form a circuit around the 4th ventricle choroid plexus." [ZFIN:ZDB-PUB-080908-11] synonym: "choroid vascular circuit" RELATED [] synonym: "CVC" EXACT [] xref: TAO:0005219 xref: ZFIN:ZDB-ANAT-090922-261 is_a: ZFA:0000099 ! brain vasculature relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001443 ! choroid plexus relationship: start ZFS:0000038 ! Larval:Day 6 created_by: Ceri creation_date: 2009-07-09T02:58:20Z [Term] id: ZFA:0005220 name: larval melanophore stripe namespace: zebrafish_anatomy def: "A melanophore stripe that forms the immature pigment pattern." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0005220 xref: ZFIN:ZDB-ANAT-090922-262 is_a: ZFA:0001463 ! melanophore stripe relationship: end ZFS:0000040 ! Larval:Days 14-20 relationship: start ZFS:0000030 ! Pharyngula:Prim-15 created_by: Ceri creation_date: 2009-07-09T03:59:45Z [Term] id: ZFA:0005221 name: dorsal larval melanophore stripe namespace: zebrafish_anatomy def: "A larval melanophore stripe that forms a band extending from the head to the tail along the dorsal apex of the myotomes." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0005221 xref: ZFIN:ZDB-ANAT-090922-263 is_a: ZFA:0005220 ! larval melanophore stripe relationship: end ZFS:0000040 ! Larval:Days 14-20 relationship: start ZFS:0000030 ! Pharyngula:Prim-15 created_by: Ceri creation_date: 2009-07-09T04:04:10Z [Term] id: ZFA:0005222 name: ventral larval melanophore stripe namespace: zebrafish_anatomy def: "A larval melanophore stripe that forms a band, of pigmentation extending from the bases of the eyes on each side of the midline to the top of the tail, that underlies the myotomes bilaterally, still is dorsal to the yolk." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0005222 xref: ZFIN:ZDB-ANAT-090922-264 is_a: ZFA:0005220 ! larval melanophore stripe relationship: end ZFS:0000040 ! Larval:Days 14-20 relationship: start ZFS:0000031 ! Pharyngula:Prim-25 created_by: Ceri creation_date: 2009-07-09T04:05:57Z [Term] id: ZFA:0005223 name: lateral larval melanophore stripe namespace: zebrafish_anatomy def: "The larval melanophore stripe that is at the level of the horizontal myoseptum." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0005223 xref: ZFIN:ZDB-ANAT-090922-265 is_a: ZFA:0005220 ! larval melanophore stripe relationship: end ZFS:0000040 ! Larval:Days 14-20 relationship: start ZFS:0000032 ! Pharyngula:High-pec created_by: Ceri creation_date: 2009-07-09T04:29:18Z [Term] id: ZFA:0005224 name: yolk larval melanophore stripe namespace: zebrafish_anatomy def: "The larval melanophore stripe that forms a band over the ventral surface of the yolk sac." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0005224 xref: ZFIN:ZDB-ANAT-090922-266 is_a: ZFA:0005220 ! larval melanophore stripe relationship: end ZFS:0000040 ! Larval:Days 14-20 relationship: start ZFS:0000035 ! Larval:Protruding-mouth created_by: Ceri creation_date: 2009-07-09T04:30:34Z [Term] id: ZFA:0005225 name: lower lip namespace: zebrafish_anatomy def: "Lip that covers the lower portion of the mouth." [ZFIN:Curator] xref: TAO:0002060 xref: ZFIN:ZDB-ANAT-090922-267 is_a: ZFA:0007006 ! lip relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-07-09T04:42:58Z [Term] id: ZFA:0005226 name: upper lip namespace: zebrafish_anatomy def: "Lip that covers the lower portion of the mouth." [ZFIN:Curator] xref: TAO:0001970 xref: ZFIN:ZDB-ANAT-090922-268 is_a: ZFA:0007006 ! lip relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-07-09T04:43:52Z [Term] id: ZFA:0005227 name: protoneuromast namespace: zebrafish_anatomy def: "A group of about 20 cells deposited by the migrating lateral line primordium. A few hours after deposition these cells mature to form the neuromast." [ZFIN:ZDB-PUB-070907-34, ZFIN:ZDB-PUB-080630-20] synonym: "immature neuromast" RELATED [] synonym: "proto neuromast" RELATED [] synonym: "proto-neuromast" RELATED [] xref: TAO:0005227 xref: ZFIN:ZDB-ANAT-090922-269 is_a: ZFA:0001478 ! anatomical cluster relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0000034 ! lateral line system relationship: start ZFS:0000028 ! Segmentation:26+ somites created_by: Ceri creation_date: 2009-07-09T04:49:53Z [Term] id: ZFA:0005229 name: optic choroid namespace: zebrafish_anatomy def: "A portion of tissue that contains the choroid vasculature. It lies at the back of the eye." [ISBN:1402070861] synonym: "choroid" EXACT [ISBN:1402070861] xref: TAO:0005229 xref: ZFIN:ZDB-ANAT-090922-270 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000107 ! eye relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-07-14T02:05:16Z [Term] id: ZFA:0005230 name: CoBL namespace: zebrafish_anatomy def: "A bifurcate interneuron where the axon projects ventrally, crossing the spinal cord ventral to the Mauthner axons before bifurcating and extending dorsally." [ZFIN:ZDB-PUB-010807-17] synonym: "commissural bifurcating longitudinal" EXACT [] xref: TAO:0005230 xref: ZFIN:ZDB-ANAT-090922-271 is_a: ZFA:0005231 ! bifurcate interneuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-07-17T01:12:14Z [Term] id: ZFA:0005231 name: bifurcate interneuron namespace: zebrafish_anatomy def: "Is a spinal interneuron that has an axon that splits into roughly equal size branches." [ZFIN:Curator] xref: TAO:0005231 xref: ZFIN:ZDB-ANAT-090922-272 is_a: ZFA:0000778 ! spinal cord interneuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-07-17T01:22:50Z [Term] id: ZFA:0005232 name: MCoD namespace: zebrafish_anatomy def: "A multipolar interneuron with branching dendrites. The axon extend ventrally, lateral to the Mauthner axons before crossing the cord and descending ventrally." [ZFIN:ZDB-PUB-010807-17] synonym: "larval VeLD" RELATED [] synonym: "multipolar commissural descending interneuron" EXACT [] xref: TAO:0005232 xref: ZFIN:ZDB-ANAT-090922-273 is_a: ZFA:0000778 ! spinal cord interneuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000026 ! Segmentation:14-19 somites created_by: Ceri creation_date: 2009-07-17T03:46:32Z [Term] id: ZFA:0005233 name: CiD namespace: zebrafish_anatomy def: "A interneuron of the spinal cord with an ipsilateral axon that extends ventral to the Mauthner axon then turns dorsally and caudally and sometimes has a minor ascending branch." [ZFIN:ZDB-PUB-010807-17] synonym: "circumferential descending interneuron" EXACT [] synonym: "commissural decending interneurons" EXACT [ZFIN:ZDB-PUB-081114-2] synonym: "V2a interneuron" RELATED [] xref: TAO:0005233 xref: ZFIN:ZDB-ANAT-090922-274 is_a: ZFA:0000778 ! spinal cord interneuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000026 ! Segmentation:14-19 somites created_by: Ceri creation_date: 2009-07-17T03:55:01Z [Term] id: ZFA:0005234 name: CoLA namespace: zebrafish_anatomy def: "A spinal interneuron with a dorsal dendrite that extends caudally. CoLA also has midlateral process that extend rostrally and caudally, the axon crosses the cord dorsal to the Mauthner cell and ascends, extending dorsally. Axon has minor descending branch." [ZFIN:ZDB-PUB-010807-17] synonym: "commissural longitudinal ascending interneuron" EXACT [] xref: TAO:0005234 xref: ZFIN:ZDB-ANAT-090922-275 is_a: ZFA:0000778 ! spinal cord interneuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000026 ! Segmentation:14-19 somites created_by: Ceri creation_date: 2009-07-17T04:14:51Z [Term] id: ZFA:0005235 name: UCoD namespace: zebrafish_anatomy def: "A unipolar spinal interneuron that forms dendritic trunk laterally with extensive dendritic branching. The axon extends ventrally, lateral to the Mauthner axons before crssoing the cord and descending ventrally." [ZFIN:ZDB-PUB-010807-17] synonym: "unipolar commissural descending interneuron" RELATED [] xref: TAO:0005235 xref: ZFIN:ZDB-ANAT-090922-276 is_a: ZFA:0000778 ! spinal cord interneuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000026 ! Segmentation:14-19 somites created_by: Ceri creation_date: 2009-07-17T04:26:07Z [Term] id: ZFA:0005236 name: basophilic erythroblast namespace: zebrafish_anatomy def: "A nucleated immature erythrocyte, having cytoplasm generally similar to that of the earlier proerythroblast but sometimes even more basophilic, and usually regular in outline. The nucleus is still relatively large, but the chromatin strands are thicker and more deeply staining, giving a coarser appearance; the nucleoli have disappeared." [ZFIN:ZDB-PUB-070221-1] synonym: "basophilic normoblast" EXACT [ZFIN:ZDB-PUB-070221-1] synonym: "early erythroblast" EXACT [ZFIN:ZDB-PUB-070221-1] synonym: "early normoblast" RELATED [ZFIN:ZDB-PUB-070221-1] synonym: "prorubricyte" EXACT [ZFIN:ZDB-PUB-070221-1] xref: CL:0000549 xref: TAO:0005236 xref: ZFIN:ZDB-ANAT-090922-277 is_a: ZFA:0005237 ! erythroblast relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000030 ! Pharyngula:Prim-15 created_by: Ceri creation_date: 2009-08-10T05:29:27Z [Term] id: ZFA:0005237 name: erythroblast namespace: zebrafish_anatomy def: "A nucleated precursor of an erythrocyte." [ZFIN:ZDB-PUB-070221-1] synonym: "normoblast" EXACT [] xref: CL:0000765 xref: TAO:0005237 xref: ZFIN:ZDB-ANAT-090922-278 is_a: ZFA:0009325 ! erythroid lineage cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-08-10T05:13:41Z [Term] id: ZFA:0005238 name: juxtaglomerular cell namespace: zebrafish_anatomy xref: CL:0000648 xref: TAO:0005238 xref: ZFIN:ZDB-ANAT-090922-279 is_a: ZFA:0009118 ! smooth muscle cell relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000529 ! kidney relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-08-10T05:41:07Z [Term] id: ZFA:0005239 name: micropylar cell namespace: zebrafish_anatomy def: "Is a specialized pore forming cell of the follicle, located adjacent to the animal pole of the oocyte. The micropylar cell makes the single micropyle (pore) through the chorion through which the sperm fertilizes the egg." [ZFIN:ZDB-PUB-080630-14] synonym: "plug cell" EXACT [] xref: TAO:0005239 xref: ZFIN:ZDB-ANAT-090922-280 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001110 ! ovarian follicle relationship: start ZFS:0000043 ! Juvenile:Days 45-89 created_by: Ceri creation_date: 2009-08-10T06:26:10Z [Term] id: ZFA:0005240 name: Kolmer-Agduhr neuron namespace: zebrafish_anatomy def: "Kolmer-Agduhr neurons are ciliated GABAergic neurons that contact the central canal of the spinal cord and have ipsilateral ascending axons." [ZFIN:ZDB-PUB-080825-21] synonym: "KA cell" EXACT [] synonym: "KA interneuron" EXACT [ZFIN:ZDB-PUB-041115-5] synonym: "KA neuron" EXACT [ZFIN:ZDB-PUB-980624-10] synonym: "Kolmer-Agduhr cell" EXACT [] xref: CL:0005007 xref: TAO:0005240 xref: ZFIN:ZDB-ANAT-090922-281 is_a: ZFA:0000778 ! spinal cord interneuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000023 ! Segmentation:1-4 somites created_by: Ceri creation_date: 2009-08-11T02:50:27Z [Term] id: ZFA:0005241 name: polychromatophilic erythroblast namespace: zebrafish_anatomy def: "A nucleated, immature erythrocyte in which the nucleus occupies a relatively smaller part of the cell than in its precursor, the basophilic erythroblast. The cytoplasm is beginning to acquire hemoglobin and thus is no longer a purely blue color, but takes on an acidophilic tint, which becomes progressively more marked as the cell matures. The chromatin of the nucleus is arranged in coarse, deeply staining clumps." [ZFIN:ZDB-PUB-070221-1] synonym: "intermediate erythroblast" EXACT [] synonym: "intermediate normoblast" RELATED [] synonym: "polychromatic erythroblast" EXACT [] synonym: "polychromatic normoblast" EXACT [] synonym: "polychromatophilic normoblast" RELATED [] synonym: "rubricyte" EXACT [] xref: CL:0000550 xref: TAO:0005241 xref: ZFIN:ZDB-ANAT-090922-282 is_a: ZFA:0005237 ! erythroblast relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-08-11T03:38:32Z [Term] id: ZFA:0005242 name: multi-ciliated epithelial cell namespace: zebrafish_anatomy def: "A ciliated epithelial cell with many cilium." [CL:Curator] synonym: "multiciliated epithelial cell" EXACT [] xref: CL:0005012 xref: TAO:0005242 xref: ZFIN:ZDB-ANAT-090922-283 is_a: ZFA:0009035 ! ciliated epithelial cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-08-11T04:29:39Z [Term] id: ZFA:0005243 name: single ciliated epithelial cell namespace: zebrafish_anatomy def: "A ciliated epithelial cell with a single cilium." [CL:curator] synonym: "single-ciliated epithelial cell" EXACT [] xref: CL:0005013 xref: TAO:0005243 xref: ZFIN:ZDB-ANAT-090922-284 is_a: ZFA:0009035 ! ciliated epithelial cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-08-11T04:30:15Z [Term] id: ZFA:0005244 name: auditory epithelial support cell namespace: zebrafish_anatomy def: "A non-sensory cell that extends from the basement membrane to the apical surface of the auditory epithelium and provides support for auditory hair cells." [CL:curator] synonym: "auditory support cell" EXACT [] xref: CL:0005014 xref: TAO:0005244 xref: ZFIN:ZDB-ANAT-090922-285 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-08-11T04:41:03Z [Term] id: ZFA:0005245 name: xanthoblast namespace: zebrafish_anatomy alt_id: ZFA:0005330 def: "A non-terminally differentiated cell that originates from the neural crest and differentiates into a xanthophore" [CL:curator] synonym: "xanthoblast" EXACT [] xref: CL:0005002 xref: TAO:0002148 xref: ZFIN:ZDB-ANAT-090922-286 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009165 ! neural crest cell relationship: end ZFS:0000032 ! Pharyngula:High-pec relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-08-11T04:53:40Z [Term] id: ZFA:0005246 name: regeneration fibroblast namespace: zebrafish_anatomy def: "Is a fibroblast that differentiates from the de-differentiated cells of the blastema." [ZFIN:curator] synonym: "blastemal fibroblast" EXACT [] synonym: "blastemal fibroblasts" EXACT PLURAL [] xref: TAO:0005246 xref: ZFIN:ZDB-ANAT-090922-287 is_a: ZFA:0009026 ! fibroblast relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005147 ! regenerating tissue relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-08-12T01:43:26Z [Term] id: ZFA:0005247 name: CiA namespace: zebrafish_anatomy def: "Interneurons of the spinal cord that arise from the V1 proliferation domain. The CiA neurons inhibit motoneurons, other ventral interneurons and also inhibit dorsal sensory neurons involved in sensory gating,. CiA have ipsilateral axonal projections in both motor and sensory regions of spinal cord." [ZFIN:ZDB-PUB-040625-12, ZFIN:ZDB-PUB-060418-1] synonym: "circumferential ascending interneuron" EXACT [] synonym: "V1 interneuron" RELATED [] xref: TAO:0005247 xref: ZFIN:ZDB-ANAT-090922-288 is_a: ZFA:0000778 ! spinal cord interneuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000026 ! Segmentation:14-19 somites created_by: Ceri creation_date: 2009-08-21T04:22:15Z [Term] id: ZFA:0005248 name: trans-choroid plexus branch namespace: zebrafish_anatomy def: "Vein segment that connects the PCeVs in the choroid plexus." [ZFIN:ZDB-PUB-080908-10] synonym: "TCB" EXACT [ZFIN:ZDB-PUB-080908-10] xref: TAO:0005248 xref: ZFIN:ZDB-ANAT-091221-26 is_a: ZFA:0000082 ! vein relationship: develops_from ZFA:0005027 ! posterior cerebral vein relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005219 ! choroid plexus vascular circuit relationship: start ZFS:0000038 ! Larval:Day 6 created_by: Ceri creation_date: 2009-11-02T04:07:52Z [Term] id: ZFA:0005249 name: vasculature namespace: zebrafish_anatomy def: "Is an interconnected tubular multi-tissue structure contains fluid that is actively transported around the organism." [ZFIN:curator] xref: TAO:0001079 xref: TAO:0005249 xref: ZFIN:ZDB-ANAT-091221-27 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000010 ! cardiovascular system relationship: start ZFS:0000027 ! Segmentation:20-25 somites created_by: Ceri creation_date: 2009-11-10T02:31:54Z [Term] id: ZFA:0005250 name: capillary namespace: zebrafish_anatomy def: "Microvessel of the blood circulation system lined with vascular endothelial cells." [ZFIN:curator] xref: TAO:0005250 xref: ZFIN:ZDB-ANAT-091221-28 is_a: ZFA:0005251 ! microcirculatory vessels relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001079 ! blood vasculature relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-11-11T01:15:32Z [Term] id: ZFA:0005251 name: microcirculatory vessels namespace: zebrafish_anatomy def: "A portion of tissue that consists of a tube composed of epithelial cells that connects larger vessels." [ZFIN:curator] synonym: "vasculature" RELATED [] xref: TAO:0005251 xref: ZFIN:ZDB-ANAT-091221-29 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005249 ! vasculature relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-11-11T01:16:24Z [Term] id: ZFA:0005252 name: lymphatic capillary namespace: zebrafish_anatomy def: "Microvessel of the lymphatic system lined with a single layer of overlapping endothelial cells." [ZFIN:curator] xref: TAO:0005252 xref: ZFIN:ZDB-ANAT-091221-30 is_a: ZFA:0005251 ! microcirculatory vessels relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005105 ! lymph vasculature relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-11-11T01:27:39Z [Term] id: ZFA:0005253 name: renal glomerular capsule epithelium namespace: zebrafish_anatomy def: "Simple squamous epithelium that lines the capsule of the renal glomerulus." [ZFIN:curator] synonym: "parietal epithelial layer" EXACT [] xref: TAO:0005253 xref: ZFIN:ZDB-ANAT-091221-31 is_a: ZFA:0001498 ! simple squamous epithelium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005254 ! renal glomerular capsule relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-11-11T01:39:19Z [Term] id: ZFA:0005254 name: renal glomerular capsule namespace: zebrafish_anatomy synonym: "Bowman's capsule " EXACT [] xref: TAO:0005254 xref: ZFIN:ZDB-ANAT-091221-32 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005281 ! renal corpuscle relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-11-11T01:45:02Z [Term] id: ZFA:0005255 name: arteriole namespace: zebrafish_anatomy def: "Multi-tissue structure part of the blood vasculature, feeds into capillaries. Arterioles carry blood away from the heart." [ZFIN:curator] xref: TAO:0002138 xref: ZFIN:ZDB-ANAT-091221-33 is_a: ZFA:0005314 ! blood vessel relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001079 ! blood vasculature relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-11-11T01:46:54Z [Term] id: ZFA:0005256 name: intervillus pockets namespace: zebrafish_anatomy def: "A portion of tissue formed between the base of the intestinal villi that is part of the intestinal epithelium where intestinal stem cells are located. In the intestine no crypts are present, but, the regions between the villi, the intervillus pockets, have a crypt-like function. Cells are produced in the intervillus pockets and shed from the villus tips." [ZFIN:ZDB-PUB-050209-3] synonym: "intestinal crypt" RELATED [ZFIN:ZDB-PUB-090217-11] xref: TAO:0005256 xref: ZFIN:ZDB-ANAT-100205-323 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005124 ! intestinal epithelium relationship: start ZFS:0000037 ! Larval:Day 5 created_by: Ceri creation_date: 2010-01-07T12:26:13Z [Term] id: ZFA:0005257 name: blood vessel endothelium namespace: zebrafish_anatomy def: "The vascular endothelium that lines blood vasculature." [ZFIN:curator] xref: TAO:0005257 xref: ZFIN:ZDB-ANAT-091221-34 is_a: ZFA:0001639 ! vascular endothelium relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-11-11T02:16:38Z [Term] id: ZFA:0005258 name: lymph vessel endothelium namespace: zebrafish_anatomy def: "The vascular endothelium that lines the lymph vessels." [ZFIN:curator] xref: TAO:0005258 xref: ZFIN:ZDB-ANAT-091221-35 is_a: ZFA:0001639 ! vascular endothelium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005105 ! lymph vasculature relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-11-11T02:18:09Z [Term] id: ZFA:0005259 name: continuous blood vessel endothelium namespace: zebrafish_anatomy def: "Blood vessel endothelium that has tight junctions between the endothelial cells." [ZFIN:curator] xref: TAO:0005259 xref: ZFIN:ZDB-ANAT-091221-36 is_a: ZFA:0005257 ! blood vessel endothelium relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-11-11T02:19:54Z [Term] id: ZFA:0005260 name: fenestrated blood vessel endothelium namespace: zebrafish_anatomy def: "Blood vessel endothelium that has pores that allow passage small molecules and proteins." [ZFIN:curator] xref: TAO:0005260 xref: ZFIN:ZDB-ANAT-091221-37 is_a: ZFA:0005257 ! blood vessel endothelium relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-11-11T02:21:55Z [Term] id: ZFA:0005261 name: sinusoidal blood vessel endothelium namespace: zebrafish_anatomy def: "Fenestrated blood vessel endothelium with pores that are large enough for blood cells to pass. The basal lamina and gap junctions may be discontinuous." [ZFIN:curator] xref: TAO:0005261 xref: ZFIN:ZDB-ANAT-091221-38 is_a: ZFA:0005260 ! fenestrated blood vessel endothelium relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-11-11T02:51:27Z [Term] id: ZFA:0005262 name: caudal fin dorsal procurrent ray namespace: zebrafish_anatomy def: "Caudal procurrent ray that is dorsally located on the caudal fin skeleton." [TAO:curator] synonym: "dorsal procurrent caudal-fin ray" EXACT [] xref: TAO:0005262 xref: ZFIN:ZDB-ANAT-091221-39 is_a: ZFA:0001584 ! caudal fin procurrent ray relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-12-02T02:06:39Z [Term] id: ZFA:0005263 name: caudal fin ventral caudal procurrent ray namespace: zebrafish_anatomy def: "Caudal procurrent ray that is ventrally located on the caudal fin skeleton." [TAO:curator] synonym: "ventral procurrent ray" EXACT [] xref: TAO:0005263 xref: ZFIN:ZDB-ANAT-091221-40 is_a: ZFA:0001584 ! caudal fin procurrent ray relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-12-02T02:13:14Z [Term] id: ZFA:0005264 name: primordial ligament namespace: zebrafish_anatomy def: "Ligament that connects the maxilla with the lower jaw" [TAO:curator] synonym: "articular-maxillary ligament " EXACT [doi:10.1111/j.1096-3642.1964.tb00493.x] synonym: "ligamentum primordiale " EXACT [] synonym: "maxillo-mandibular ligament" EXACT [] xref: TAO:0001828 xref: ZFIN:ZDB-ANAT-091221-41 is_a: ZFA:0001675 ! ligament relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-12-02T02:28:51Z [Term] id: ZFA:0005265 name: premaxillary-maxillary ligament namespace: zebrafish_anatomy def: "Ligament that connects the premaxilla to the maxilla." [TAO:curator] xref: TAO:0001827 xref: ZFIN:ZDB-ANAT-091221-42 is_a: ZFA:0001675 ! ligament relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-12-02T02:52:49Z [Term] id: ZFA:0005266 name: dorsal longitudinal fasciculus namespace: zebrafish_anatomy comment: The DLF in zebrafish is not homologous to the Mammalian DLF. Mammalian DLF is in brain, the fish DLF is in spinal cord. synonym: "DLF" RELATED [] xref: ZFIN:ZDB-ANAT-091221-43 is_a: ZFA:0000318 ! brainstem and spinal white matter relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-12-02T04:19:10Z [Term] id: ZFA:0005267 name: erector muscle namespace: zebrafish_anatomy def: "Muscle that moves parts of the body in a superior direction to an erect position. Antagonistic to depressor muscle." [ZFIN:curator] xref: TAO:0005267 xref: ZFIN:ZDB-ANAT-091221-44 is_a: ZFA:0005277 ! skeletal muscle relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-12-03T05:15:15Z [Term] id: ZFA:0005268 name: adductor muscle namespace: zebrafish_anatomy def: "A muscle that brings a body part closer to the sagittal plane of the body." [ZFIN:Curator] xref: TAO:0002136 xref: ZFIN:ZDB-ANAT-091221-45 is_a: ZFA:0005277 ! skeletal muscle relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-12-04T12:59:52Z [Term] id: ZFA:0005269 name: abductor muscle namespace: zebrafish_anatomy def: "A muscle that moves a body part away from the sagittal plane of the body." [ZFIN:curator] xref: TAO:0002135 xref: ZFIN:ZDB-ANAT-091221-46 is_a: ZFA:0005277 ! skeletal muscle relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-12-04T01:05:41Z [Term] id: ZFA:0005270 name: depressor muscle namespace: zebrafish_anatomy def: "A muscle that moves body parts into an inferior direction or lowered position. Antagonistic to erector muscle." [ZFIN:curator] xref: TAO:0005270 xref: ZFIN:ZDB-ANAT-091221-47 is_a: ZFA:0005277 ! skeletal muscle relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-12-04T01:15:51Z [Term] id: ZFA:0005271 name: flexor muscle namespace: zebrafish_anatomy def: "A muscle that decrease the angle of a joint." [ZFIN:curator] xref: TAO:0005271 xref: ZFIN:ZDB-ANAT-091221-48 is_a: ZFA:0005277 ! skeletal muscle relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2009-12-04T01:20:04Z [Term] id: ZFA:0005272 name: immature gonad namespace: zebrafish_anatomy def: "Immature reproductive tissue that has not undergone final maturation into either testis or ovary. During gonadal development, the gonad may be transiently intersexual where there is a parallel presence of both oocytes and spermatocytes." [ZFIN:ZDB-PUB-070305-2] synonym: "juvenile gonad" EXACT [] synonym: "juvenile ovary" EXACT [ZFIN:ZDB-PUB-070305-2] xref: TAO:0005272 xref: ZFIN:ZDB-ANAT-091221-49 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001262 ! gonad primordium relationship: end ZFS:0000041 ! Larval:Days 21-29 relationship: part_of ZFA:0000632 ! reproductive system relationship: start ZFS:0000040 ! Larval:Days 14-20 created_by: Ceri creation_date: 2009-12-09T11:35:20Z [Term] id: ZFA:0005273 name: intestinal mucosal muscle namespace: zebrafish_anatomy def: "A thin layer of smooth muscle immediately beneath the base of the villi which permits the intestinal mucosa to dynamically move and fold." [ZFIN:ZDB-PUB-090217-11] synonym: "intestinal lamina muscularis mucosae" RELATED [http:www.vivo.colostate.edu/hbooks/pathphys/digestion/basics/gi_microanatomy.html] xref: TAO:0005273 xref: ZFIN:ZDB-ANAT-100205-324 is_a: ZFA:0005274 ! smooth muscle relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001338 ! intestine relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-01-07T01:36:48Z [Term] id: ZFA:0005274 name: smooth muscle namespace: zebrafish_anatomy def: "A non-striated muscle that is composed of spindle-shaped cells. Smooth muscle usually is organized into sheets that line cavitated organs." [ZFIN:curator] xref: TAO:0005274 xref: ZFIN:ZDB-ANAT-100205-325 is_a: ZFA:0005145 ! muscle relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-01-07T02:57:18Z [Term] id: ZFA:0005275 name: arrector muscle namespace: zebrafish_anatomy xref: TAO:0002147 xref: ZFIN:ZDB-ANAT-100205-326 is_a: ZFA:0005277 ! skeletal muscle relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-01-07T04:50:10Z [Term] id: ZFA:0005276 name: inclinator muscle namespace: zebrafish_anatomy xref: TAO:0005276 xref: ZFIN:ZDB-ANAT-100205-327 is_a: ZFA:0005277 ! skeletal muscle relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-01-07T04:51:38Z [Term] id: ZFA:0005277 name: skeletal muscle namespace: zebrafish_anatomy def: "Muscle, composed of long cylindrical, multinucleated cells that attaches to the skeleton via tendons." [ZFIN:curator] xref: TAO:0005277 xref: ZFIN:ZDB-ANAT-100205-328 is_a: ZFA:0005145 ! muscle relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-01-07T05:06:51Z [Term] id: ZFA:0005278 name: enteric longitudinal muscle namespace: zebrafish_anatomy def: "Smooth muscle of the enteric muscle system in which the cells are aligned parallel to the lumen of the gut." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-100205-329 is_a: ZFA:0005274 ! smooth muscle relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001324 ! enteric musculature relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-01-07T05:48:52Z [Term] id: ZFA:0005279 name: enteric circular muscle namespace: zebrafish_anatomy def: "Smooth muscle of the enteric muscle system in which the cells are aligned perpendicular to the lumen of the gut." [ZFIN:curator] xref: TAO:0005279 xref: ZFIN:ZDB-ANAT-100205-330 is_a: ZFA:0005274 ! smooth muscle relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001324 ! enteric musculature relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-01-07T05:51:25Z [Term] id: ZFA:0005280 name: cardiac muscle namespace: zebrafish_anatomy def: "Muscle composed of cardiac muscle cells that is part of the heart." [ZFIN:curator] xref: TAO:0005280 xref: ZFIN:ZDB-ANAT-100205-331 is_a: ZFA:0005145 ! muscle relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-01-07T06:04:03Z [Term] id: ZFA:0005281 name: renal corpuscle namespace: zebrafish_anatomy def: "The part of the nephron that filters blood." [ZFIN:curator] synonym: "Malpighian corpuscle" EXACT [] xref: TAO:0005281 xref: ZFIN:ZDB-ANAT-100205-332 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005282 ! nephron relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-01-19T01:11:46Z [Term] id: ZFA:0005282 name: nephron namespace: zebrafish_anatomy def: "Functional unit of the kidney that filters waste." [ZFIN:curator] xref: TAO:0002153 xref: ZFIN:ZDB-ANAT-100205-333 is_a: ZFA:0001478 ! anatomical cluster relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000529 ! kidney relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-01-19T02:47:46Z [Term] id: ZFA:0005283 name: renal capsular space namespace: zebrafish_anatomy def: "Space between the renal glomerulus and the glomerular capsule. Renal filtrate collects here then passes into the renal tubule." [ZFIN:curator] synonym: "Bowman's space" EXACT [] synonym: "inter-glomerular space" EXACT [] synonym: "urinary space" EXACT [] xref: TAO:0005283 xref: ZFIN:ZDB-ANAT-100205-334 is_a: ZFA:0001643 ! anatomical space relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005281 ! renal corpuscle relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-01-19T02:51:01Z [Term] id: ZFA:0005284 name: glomerular capillary namespace: zebrafish_anatomy def: "Capillary that is part of the renal glomerulus. Glomerular capillary endothelial membranes in zebrafish normally have a fenestrated morphology that is visible at the ultrastructural level." [ZFIN:curator, ZFIN:ZDB-PUB-000824-1] xref: TAO:0005284 xref: ZFIN:ZDB-ANAT-100205-335 is_a: ZFA:0005250 ! capillary relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001288 ! renal glomerulus relationship: part_of ZFA:0005305 ! kidney vasculature relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-01-19T03:00:45Z [Term] id: ZFA:0005285 name: glomerular basement membrane namespace: zebrafish_anatomy def: "Membrane between the mesonephric podocytes and the renal glomerular capillaries. It is a trilaminar structure composed of the fused basement membranes of the glomerular capillaries and basement membrane of the podocytes. The capillary membranes touch the GBM at contact points that are separated by pores. The membrane is semi-permeable allowing water and small molecules to pass into the renal capsular space." [ZFIN:ZDB-PUB-000824-1] synonym: "glomerular filtration membrane" EXACT [] xref: TAO:0005285 xref: ZFIN:ZDB-ANAT-100205-336 is_a: ZFA:0001485 ! basal lamina relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001288 ! renal glomerulus relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-01-19T03:26:30Z [Term] id: ZFA:0005286 name: lamina densa namespace: zebrafish_anatomy def: "Middle layer of the glomerular basement membrane." [ZFIN:curator] xref: TAO:0005286 xref: ZFIN:ZDB-ANAT-100205-337 is_a: ZFA:0000382 ! acellular anatomical structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005285 ! glomerular basement membrane relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-01-19T03:52:52Z [Term] id: ZFA:0005287 name: lamina rara interna namespace: zebrafish_anatomy def: "Layer of the glomerular basement membrane adjacent to the glomerular capillary." [ZFIN:curator] xref: TAO:0005287 xref: ZFIN:ZDB-ANAT-100205-338 is_a: ZFA:0000382 ! acellular anatomical structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005285 ! glomerular basement membrane relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-01-19T03:56:00Z [Term] id: ZFA:0005288 name: lamina rara externa namespace: zebrafish_anatomy def: "Layer of the glomerular basement membrane adjacent to the podocytes and capsular space." [ZFIN:curator] xref: TAO:0005288 xref: ZFIN:ZDB-ANAT-100205-339 is_a: ZFA:0000382 ! acellular anatomical structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005285 ! glomerular basement membrane relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-01-19T03:56:32Z [Term] id: ZFA:0005289 name: renal duct namespace: zebrafish_anatomy def: "Tubes in the kidney that collect and transport urine." [ZFIN:ZDB-PUB-071029-9] xref: TAO:0005289 xref: ZFIN:ZDB-ANAT-100205-340 is_a: ZFA:0005171 ! duct relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000529 ! kidney relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-01-19T04:36:59Z [Term] id: ZFA:0005290 name: proximal convoluted tubule namespace: zebrafish_anatomy def: "Renal tubule that connects to the renal corpuscle." [ZFIN:curator] xref: TAO:0005290 xref: ZFIN:ZDB-ANAT-100205-341 is_a: ZFA:0005289 ! renal duct relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001287 ! renal tubule relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-01-20T12:39:12Z [Term] id: ZFA:0005291 name: proximal straight tubule namespace: zebrafish_anatomy def: "Portion of the renal tubule which is just posterior to the proximal convoluted tubule." [ZFIN:curator] xref: TAO:0005291 xref: ZFIN:ZDB-ANAT-100205-342 is_a: ZFA:0005289 ! renal duct relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001287 ! renal tubule relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-01-20T12:41:23Z [Term] id: ZFA:0005292 name: distal late tubule namespace: zebrafish_anatomy def: "Portion of the renal tubule which is just posterior to the distal early tubule." [ZFIN:curator] xref: TAO:0005292 xref: ZFIN:ZDB-ANAT-100205-343 is_a: ZFA:0005289 ! renal duct relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001287 ! renal tubule relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-01-20T12:43:22Z [Term] id: ZFA:0005293 name: distal early tubule namespace: zebrafish_anatomy def: "Portion of the renal tubule which is just posterior to the proximal straight tubule." [ZFIN:curator] synonym: "distal early tubules" EXACT PLURAL [] xref: TAO:0005293 xref: ZFIN:ZDB-ANAT-100205-344 is_a: ZFA:0005289 ! renal duct relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001287 ! renal tubule relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-01-20T12:44:30Z [Term] id: ZFA:0005294 name: collecting duct namespace: zebrafish_anatomy def: "Renal duct that collects the output from renal tubules." [ZFIN:curator] xref: TAO:0005294 xref: ZFIN:ZDB-ANAT-100205-345 is_a: ZFA:0005289 ! renal duct relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-01-20T01:17:47Z [Term] id: ZFA:0005295 name: axial blood vessel namespace: zebrafish_anatomy xref: TAO:0005295 xref: ZFIN:ZDB-ANAT-100205-346 is_a: ZFA:0001073 ! axial vasculature relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-01-20T02:24:10Z [Term] id: ZFA:0005296 name: axial lymph vessel namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-100205-347 is_a: ZFA:0001073 ! axial vasculature relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005105 ! lymph vasculature relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-01-20T02:24:34Z [Term] id: ZFA:0005297 name: cranial blood vessel namespace: zebrafish_anatomy def: "Blood vessel part of cranial vasculature." [ZFIN:curator] xref: TAO:0005297 xref: ZFIN:ZDB-ANAT-100205-348 is_a: ZFA:0005314 ! blood vessel relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001267 ! cranial vasculature relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-01-20T02:25:23Z [Term] id: ZFA:0005298 name: cranial lymph vessel namespace: zebrafish_anatomy xref: TAO:0005298 xref: ZFIN:ZDB-ANAT-100205-349 is_a: ZFA:0005105 ! lymph vasculature relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001267 ! cranial vasculature relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-01-20T02:25:47Z [Term] id: ZFA:0005299 name: fin blood vessel namespace: zebrafish_anatomy xref: TAO:0005299 xref: ZFIN:ZDB-ANAT-100205-350 is_a: ZFA:0005095 ! fin vasculature relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-01-20T02:52:39Z [Term] id: ZFA:0005300 name: fin lymph vessel namespace: zebrafish_anatomy xref: TAO:0005300 xref: ZFIN:ZDB-ANAT-100205-351 is_a: ZFA:0005095 ! fin vasculature relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-01-20T02:53:08Z [Term] id: ZFA:0005301 name: pectoral fin blood vessel namespace: zebrafish_anatomy xref: TAO:0005301 xref: ZFIN:ZDB-ANAT-100205-352 is_a: ZFA:0005299 ! fin blood vessel relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005096 ! pectoral fin vasculature relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-01-20T02:54:07Z [Term] id: ZFA:0005302 name: pectoral fin lymph vessel namespace: zebrafish_anatomy xref: TAO:0005302 xref: ZFIN:ZDB-ANAT-100205-353 is_a: ZFA:0005300 ! fin lymph vessel relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005096 ! pectoral fin vasculature relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-01-20T02:54:43Z [Term] id: ZFA:0005303 name: caudal fin lymph vessel namespace: zebrafish_anatomy xref: TAO:0005303 xref: ZFIN:ZDB-ANAT-100205-354 is_a: ZFA:0005300 ! fin lymph vessel relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005097 ! caudal fin vasculature relationship: part_of ZFA:0005105 ! lymph vasculature relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-01-20T02:55:44Z [Term] id: ZFA:0005304 name: caudal fin blood vessel namespace: zebrafish_anatomy xref: TAO:0005304 xref: ZFIN:ZDB-ANAT-100205-355 is_a: ZFA:0005299 ! fin blood vessel relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005097 ! caudal fin vasculature relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-01-20T02:55:49Z [Term] id: ZFA:0005305 name: kidney vasculature namespace: zebrafish_anatomy xref: TAO:0005305 xref: ZFIN:ZDB-ANAT-100205-356 is_a: ZFA:0005249 ! vasculature relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000529 ! kidney relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-01-20T03:02:06Z [Term] id: ZFA:0005306 name: kidney blood vessel namespace: zebrafish_anatomy xref: TAO:0005306 xref: ZFIN:ZDB-ANAT-100205-357 is_a: ZFA:0005314 ! blood vessel relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005305 ! kidney vasculature relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-01-20T03:02:27Z [Term] id: ZFA:0005307 name: afferent arteriole namespace: zebrafish_anatomy def: "Arteriole that carries blood into the glomerular capillaries." [ZFIN:curator] xref: TAO:0002139 xref: ZFIN:ZDB-ANAT-100205-358 is_a: ZFA:0005255 ! arteriole relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005281 ! renal corpuscle relationship: part_of ZFA:0005305 ! kidney vasculature relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-01-20T03:02:56Z [Term] id: ZFA:0005308 name: efferent arteriole namespace: zebrafish_anatomy def: "Arteriole that carries blood out of the glomerular capillaries." [ZFIN:curator] xref: TAO:0002140 xref: ZFIN:ZDB-ANAT-100205-359 is_a: ZFA:0005255 ! arteriole relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005281 ! renal corpuscle relationship: part_of ZFA:0005305 ! kidney vasculature relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-01-20T03:05:49Z [Term] id: ZFA:0005309 name: pronephric glomerular capillary namespace: zebrafish_anatomy def: "Capillary that is part of the pronephric glomerulus. Glomerular capillary endothelial membranes in zebrafish normally have a fenestrated morphology that is visible at the ultrastructural level." [ZFIN:curator, ZFIN:ZDB-PUB-000824-1] xref: TAO:0005309 xref: ZFIN:ZDB-ANAT-100205-360 is_a: ZFA:0005250 ! capillary relationship: end ZFS:0000037 ! Larval:Day 5 relationship: part_of ZFA:0001557 ! pronephric glomerulus relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-01-29T11:29:44Z [Term] id: ZFA:0005310 name: pronephric glomerular capsule namespace: zebrafish_anatomy synonym: "Bowman's capsule " EXACT [] xref: TAO:0005310 xref: ZFIN:ZDB-ANAT-100205-361 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000037 ! Larval:Day 5 relationship: part_of ZFA:0000151 ! pronephros relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-01-29T11:39:01Z [Term] id: ZFA:0005311 name: pronephric glomerular capsule epithelium namespace: zebrafish_anatomy def: "Simple squamous epithelium that lines the capsule of the pronephric glomerulus." [ZFIN:curator] synonym: "pronephric parietal epithelial layer" EXACT [] xref: TAO:0005311 xref: ZFIN:ZDB-ANAT-100205-362 is_a: ZFA:0001498 ! simple squamous epithelium relationship: end ZFS:0000037 ! Larval:Day 5 relationship: part_of ZFA:0005310 ! pronephric glomerular capsule relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-01-29T11:40:01Z [Term] id: ZFA:0005312 name: pronephric capsular space namespace: zebrafish_anatomy def: "Space between the pronephric glomerulus and the pronephric glomerular capsule. Renal filtrate collects here then passes into the pronephric tubule." [ZFIN:curator] synonym: "Bowman's space" EXACT [] synonym: "inter-glomerular space" EXACT [] synonym: "urinary space" EXACT [] xref: TAO:0005312 xref: ZFIN:ZDB-ANAT-100205-363 is_a: ZFA:0001643 ! anatomical space relationship: end ZFS:0000037 ! Larval:Day 5 relationship: part_of ZFA:0000151 ! pronephros relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-01-29T11:41:05Z [Term] id: ZFA:0005313 name: pronephric glomerular basement membrane namespace: zebrafish_anatomy def: "Membrane between the pronephric podocytes and the pronephric glomerular capillaries. It is a trilaminar structure composed of the fused basement membranes of the glomerular capillaries and basement membrane of the podocytes. The capillary membranes touch the GBM at contact points that are separated by pores. The membrane is semi-permeable allowing water and small molecules to pass into the renal capsular space." [ZFIN:ZDB-PUB-000824-1] synonym: "jpronephric glomerular filtration membrane" EXACT [] xref: TAO:0005313 xref: ZFIN:ZDB-ANAT-100205-364 is_a: ZFA:0001485 ! basal lamina relationship: end ZFS:0000037 ! Larval:Day 5 relationship: part_of ZFA:0001557 ! pronephric glomerulus relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-01-29T11:59:03Z [Term] id: ZFA:0005314 name: blood vessel namespace: zebrafish_anatomy xref: TAO:0002137 xref: ZFIN:ZDB-ANAT-100205-365 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-01-29T02:17:51Z [Term] id: ZFA:0005315 name: venule namespace: zebrafish_anatomy def: "Multi-tissue structure part of the blood vasculature formed by the anastomosis of capillaries. Venules carry blood toward the heart." [ZFIN:curator] xref: TAO:0005315 xref: ZFIN:ZDB-ANAT-100205-366 is_a: ZFA:0005314 ! blood vessel relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001079 ! blood vasculature relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-01-29T03:29:15Z [Term] id: ZFA:0005316 name: fin fold pectoral fin bud namespace: zebrafish_anatomy def: "Fin fold of the pectoral fin bud, resulting from mesenchyme migration into the apical fold." [ZFIN:ZDB-PUB-001101-7, ZFIN:ZDB-PUB-990210-18] synonym: "fin membrane pectoral fin bud" RELATED [] xref: TAO:0005316 xref: ZFIN:ZDB-ANAT-100408-31 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0000085 ! apical ectodermal ridge pectoral fin bud relationship: end ZFS:0000033 ! Hatching:Long-pec relationship: part_of ZFA:0000141 ! pectoral fin bud relationship: start ZFS:0000033 ! Hatching:Long-pec created_by: Ceri creation_date: 2010-02-10T02:37:39Z [Term] id: ZFA:0005317 name: pectoral fin fold namespace: zebrafish_anatomy def: "The functional webs of the paired fins. They arise as a consequence of apical fold (AER) expansion and of migration of the distal mesenchyme. The fin folds are delimited by a dorsal and a ventral striated epidermis. The cells of the epidermal basal stratum are positioned on a basement membrane. Directly beneath the basement membrane of each side there is an array of actinotrichs, fibers of the extracellular matrix which act as supportive elements of the larval fin folds." [ZFIN:ZDB-PUB-990210-18] xref: TAO:0005317 xref: ZFIN:ZDB-ANAT-100408-32 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0005316 ! fin fold pectoral fin bud relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001161 ! pectoral fin relationship: start ZFS:0000034 ! Hatching:Pec-fin created_by: Ceri creation_date: 2010-02-10T03:27:29Z [Term] id: ZFA:0005318 name: lymph node namespace: zebrafish_anatomy comment: May not exist in teleosts. Only sources that say they don't exist are same sources that said lymph system didn't exist 5 years ago. xref: TAO:0005318 xref: ZFIN:ZDB-ANAT-100408-33 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000385 ! lymphatic system relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-02-10T03:44:48Z [Term] id: ZFA:0005319 name: intersegmental lymph vessel namespace: zebrafish_anatomy synonym: "islv" EXACT [] xref: TAO:0005319 xref: ZFIN:ZDB-ANAT-100408-34 is_a: ZFA:0005105 ! lymph vasculature relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000035 ! Larval:Protruding-mouth created_by: Ceri creation_date: 2010-02-10T05:28:00Z [Term] id: ZFA:0005320 name: dorsal longitudinal lymphatic vessel namespace: zebrafish_anatomy synonym: "dllv" EXACT [] xref: TAO:0005320 xref: ZFIN:ZDB-ANAT-100408-35 is_a: ZFA:0005105 ! lymph vasculature relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000035 ! Larval:Protruding-mouth created_by: Ceri creation_date: 2010-02-10T05:29:42Z [Term] id: ZFA:0005321 name: vascular smooth muscle namespace: zebrafish_anatomy def: "Smooth muscle that is part of the blood vessel wall." [ZFIN:ZDB-PUB-060216-3] xref: TAO:0005321 xref: ZFIN:ZDB-ANAT-100408-36 is_a: ZFA:0005274 ! smooth muscle relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005314 ! blood vessel relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-02-10T05:39:30Z [Term] id: ZFA:0005322 name: renal principal cell namespace: zebrafish_anatomy def: "A cuboidal epithelial cell of the kidney which regulates sodium and potassium balance. The activity of sodium and potassium channels on the cells apical membrane is regulated by aldosterone and vasopressin. In mammals these cells are located in the renal collecting ducts." [CL:curator] xref: CL:0005009 xref: TAO:0005322 xref: ZFIN:ZDB-ANAT-100408-37 is_a: ZFA:0009038 ! columnar/cuboidal epithelial cell relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001287 ! renal tubule relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-02-10T06:32:34Z [Term] id: ZFA:0005323 name: ionocyte namespace: zebrafish_anatomy def: "Specialized epithelial cells involved in the maintenance of osmotic homeostasis. They are characterized by abundant mitochondria and ion transporters. In amniotes, they are present in the renal system. In freshwater fish, ionocytes in the skin and gills help maintain osmotic homeostasis by absorbing salt from the external environment." [ZFIN:ZDB-PUB-070625-18, ZFIN:ZDB-PUB-090310-19] xref: CL:0005006 xref: TAO:0005323 xref: ZFIN:ZDB-ANAT-100408-38 is_a: ZFA:0009034 ! epithelial cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-02-22T01:18:18Z [Term] id: ZFA:0005324 name: gill ionocyte namespace: zebrafish_anatomy def: "Ionocyte located in the gills" [ZFIN:curator] xref: TAO:0005324 xref: ZFIN:ZDB-ANAT-100408-39 is_a: ZFA:0005323 ! ionocyte relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000354 ! gill relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-02-22T01:22:16Z [Term] id: ZFA:0005325 name: integument ionocyte namespace: zebrafish_anatomy def: "Ionocyte located in the integument during embryonic and larval stages." [ZFIN:curator] synonym: "extrabranchial ionocyte" RELATED [] synonym: "skin ionocyte" EXACT [] xref: TAO:0005325 xref: ZFIN:ZDB-ANAT-100408-40 is_a: ZFA:0005323 ! ionocyte relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000368 ! integument relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-02-22T02:13:14Z [Term] id: ZFA:0005326 name: NaK ionocyte namespace: zebrafish_anatomy def: "Integument ionocyte rich in Na,K-ATPase." [ZFIN:curator] synonym: "NaK-MRC" RELATED [] synonym: "NaR cell" RELATED [] xref: TAO:0005326 xref: ZFIN:ZDB-ANAT-100408-41 is_a: ZFA:0005325 ! integument ionocyte relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000368 ! integument relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-02-22T02:29:17Z [Term] id: ZFA:0005327 name: vH ionocyte namespace: zebrafish_anatomy def: "Integument ionocyte rich in vacuolar-type H+ ATPase and carbonic anhydrase" [ZFIN:curator] synonym: "HR cell" RELATED [] synonym: "VH-MRC" RELATED [] xref: TAO:0005327 xref: ZFIN:ZDB-ANAT-100408-42 is_a: ZFA:0005325 ! integument ionocyte relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000368 ! integument relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-02-22T02:32:20Z [Term] id: ZFA:0005328 name: iridoblast namespace: zebrafish_anatomy def: "A non-terminally differentiated cell that originates from the neural crest and differentiates into an iridophore." [CL:curator] xref: CL:0005001 xref: TAO:0005328 xref: ZFIN:ZDB-ANAT-100408-43 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009165 ! neural crest cell relationship: end ZFS:0000032 ! Pharyngula:High-pec relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-02-22T03:51:51Z [Term] id: ZFA:0005329 name: leucoblast namespace: zebrafish_anatomy def: "A non-terminally differentiated cell that originates from the neural crest and differentiates into a leucophore" [CL:curator] xref: CL:0005003 xref: TAO:0005329 xref: ZFIN:ZDB-ANAT-100408-44 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009165 ! neural crest cell relationship: end ZFS:0000032 ! Pharyngula:High-pec relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-02-22T03:51:51Z [Term] id: ZFA:0005331 name: pigment erythroblast namespace: zebrafish_anatomy def: "A non-terminally differentiated cell that originates from the neural crest and differentiates into an erythrophore" [CL:curator] xref: CL:0005004 xref: TAO:0005331 xref: ZFIN:ZDB-ANAT-100408-45 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009165 ! neural crest cell relationship: end ZFS:0000032 ! Pharyngula:High-pec relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-02-22T03:51:51Z [Term] id: ZFA:0005332 name: cyanoblast namespace: zebrafish_anatomy def: "A non-terminally differentiated cell that originates from the neural crest and differentiates into a cyanophore" [CL:curator] xref: CL:0005005 xref: TAO:0005332 xref: ZFIN:ZDB-ANAT-100408-46 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009165 ! neural crest cell relationship: end ZFS:0000032 ! Pharyngula:High-pec relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-02-22T03:51:51Z [Term] id: ZFA:0005333 name: tongue namespace: zebrafish_anatomy def: "A multi-tissue mediosagittal cylinder-shaped structure, clearly isolated from the jaw and adhered by differentiated plicae to the lateral walls. It is composed of a muscle surrounded by a squamous epithelium." [ZFIN:ZDB-PUB-060921-12, ZFIN:ZDB-PUB-091204-24] xref: TAO:0005333 xref: ZFIN:ZDB-ANAT-100408-47 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000547 ! mouth relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-03-18T03:04:28Z [Term] id: ZFA:0005334 name: lip epithelium namespace: zebrafish_anatomy def: "The thick, high squamous-stratified epithelium that covers the lips. It contains abundant melanocytes, many mucous cells and has well differentiated taste buds." [ZFIN:ZDB-PUB-060921-12] xref: TAO:0005334 xref: ZFIN:ZDB-ANAT-100408-48 is_a: ZFA:0001486 ! epithelium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0007006 ! lip relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-03-18T03:12:14Z [Term] id: ZFA:0005335 name: swim bladder bud namespace: zebrafish_anatomy def: "Embryonic structure that forms from the anterior gut epithelium at the level of the second somite that then matures to form the swim bladder." [ZFIN:ZDB-PUB-090511-18, ZFIN:ZDB-PUB-100202-11] xref: TAO:0005335 xref: ZFIN:ZDB-ANAT-100408-49 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0005336 ! presumptive swim bladder relationship: end ZFS:0000033 ! Hatching:Long-pec relationship: start ZFS:0000031 ! Pharyngula:Prim-25 created_by: Ceri creation_date: 2010-03-18T03:59:33Z [Term] id: ZFA:0005336 name: presumptive swim bladder namespace: zebrafish_anatomy def: "Portion of the gut endoderm that will eventually develop into the swim bladder." [ZFIN:ZDB-PUB-090511-18] synonym: "swim bladder anlage" RELATED [ZFIN:ZDB-PUB-100202-11] xref: TAO:0005336 xref: ZFIN:ZDB-ANAT-100408-50 is_a: ZFA:0001116 ! presumptive structure relationship: end ZFS:0000030 ! Pharyngula:Prim-15 relationship: part_of ZFA:0000112 ! gut relationship: start ZFS:0000029 ! Pharyngula:Prim-5 created_by: Ceri creation_date: 2010-03-18T04:20:42Z [Term] id: ZFA:0005337 name: anterior swim bladder bud namespace: zebrafish_anatomy def: "Portion of tissue that forms from the swim bladder epithelium at the anterior end of the swim bladder." [ZFIN:ZDB-PUB-090511-18] xref: TAO:0002145 xref: ZFIN:ZDB-ANAT-100408-51 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000076 ! swim bladder relationship: end ZFS:0000040 ! Larval:Days 14-20 relationship: start ZFS:0000034 ! Hatching:Pec-fin created_by: Ceri creation_date: 2010-03-18T04:28:20Z [Term] id: ZFA:0005338 name: posterior recess namespace: zebrafish_anatomy def: "Posterior protrusion of the third ventricle." [ZFIN:curator] synonym: "posterior recess of diencephalic ventricle" EXACT [ZFIN:ZDB-PUB-091221-27] xref: TAO:0005338 xref: ZFIN:ZDB-ANAT-100408-52 is_a: ZFA:0001643 ! anatomical space relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000161 ! third ventricle relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-03-18T05:40:53Z [Term] id: ZFA:0005339 name: nucleus of the lateral recess namespace: zebrafish_anatomy def: "Is a diencephalic nucleus located in the caudal periventricular hypothalamus surrounding the lateral recess of the third ventricle." [ZFIN:ZDB-PUB-091221-27] xref: TAO:0005339 xref: ZFIN:ZDB-ANAT-100408-53 is_a: ZFA:0001659 ! diencephalic nucleus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000324 ! caudal periventricular hypothalamus relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-03-18T05:52:56Z [Term] id: ZFA:0005340 name: nucleus of the posterior recess namespace: zebrafish_anatomy def: "A diencephalic nucleus that is part of caudal periventricular hypothalmus surrounding the posterior recess of the third ventricle." [ZFIN:ZDB-PUB-091221-27] xref: TAO:0005340 xref: ZFIN:ZDB-ANAT-100408-54 is_a: ZFA:0001659 ! diencephalic nucleus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000324 ! caudal periventricular hypothalamus relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-03-18T05:59:24Z [Term] id: ZFA:0005341 name: medial longitudinal catecholaminergic tract namespace: zebrafish_anatomy def: "CNS white matter tract, major catecholaminergic tract that originates in the diencephalon, passes the locus coeruleus and projects through the hindbrain into the spinal cord. Dopaminergic neurons of the posterior tuberculum and lateral hypothalamus provide the predominant contribution to descending mlct projections." [ZFIN:ZDB-PUB-091221-28] synonym: "medial longitudinal CA tract" EXACT [ZFIN:ZDB-PUB-091221-28] synonym: "mlct" EXACT [] xref: TAO:0005341 xref: ZFIN:ZDB-ANAT-100408-55 is_a: ZFA:0000145 ! CNS white matter relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-03-18T06:07:36Z [Term] id: ZFA:0005342 name: anterior catecholaminergic tract namespace: zebrafish_anatomy def: "CNS white matter, an axonal tract between ventral diencephalon and ventral telencephalon. At 3 d, the anterior catecholaminergic tract includes noradrenergic projections from the hindbrain and dopaminergic projections from ventral dopaminergic neurons. During later development, other catecholaminergic projections may also contribute to the anterior catecholaminergic tract." [ZFIN:ZDB-PUB-091221-28] xref: TAO:0002144 xref: ZFIN:ZDB-ANAT-100408-56 is_a: ZFA:0000145 ! CNS white matter relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-03-18T06:11:28Z [Term] id: ZFA:0005343 name: endohypothalamic tract namespace: zebrafish_anatomy def: "CNS white matter, axonal tract interconnecting catecholaminergic cell groups in the posterior tuberculum and hypothalamus." [ZFIN:ZDB-PUB-091221-28] xref: TAO:0005343 xref: ZFIN:ZDB-ANAT-100408-57 is_a: ZFA:0000145 ! CNS white matter relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-03-18T06:13:25Z [Term] id: ZFA:0005344 name: preopticohypothalamic tract namespace: zebrafish_anatomy def: "CNS white matter, axonal tract between the preoptic region and ventral diencephalon." [ZFIN:ZDB-PUB-091221-28] xref: TAO:0005344 xref: ZFIN:ZDB-ANAT-100408-58 is_a: ZFA:0000145 ! CNS white matter relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-03-18T06:14:28Z [Term] id: ZFA:0005345 name: adipose tissue namespace: zebrafish_anatomy def: "Connective tissue in which fat is stored." [ZFIN:curator] xref: TAO:0002134 xref: ZFIN:ZDB-ANAT-100408-59 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-03-19T10:04:38Z [Term] id: ZFA:0005346 name: extrapancreatic duct namespace: zebrafish_anatomy def: "Portion of the pancreatic duct, external to the pancreas body that connects the pancreas with the hepatopancreatic ampulla." [ZFIN:ZDB-PUB-050623-3] xref: TAO:0005346 xref: ZFIN:ZDB-ANAT-100408-60 is_a: ZFA:0005162 ! digestive system duct relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001372 ! pancreatic duct relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-03-19T03:17:51Z [Term] id: ZFA:0005347 name: vertebra 5 namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 4." [ZFIN:curator] xref: TAO:0001732 xref: ZFIN:ZDB-ANAT-100614-1 is_a: ZFA:0001582 ! non-Weberian precaudal vertebra relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-04-21T04:13:30Z [Term] id: ZFA:0005348 name: vertebra 6 namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 5." [ZFIN:curator] xref: TAO:0001980 xref: ZFIN:ZDB-ANAT-100614-2 is_a: ZFA:0001582 ! non-Weberian precaudal vertebra relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-04-21T04:31:28Z [Term] id: ZFA:0005349 name: vertebra 7 namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 6." [ZFIN:curator] xref: TAO:0001981 xref: ZFIN:ZDB-ANAT-100614-3 is_a: ZFA:0001582 ! non-Weberian precaudal vertebra relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-04-21T04:31:47Z [Term] id: ZFA:0005350 name: vertebra 8 namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 7." [ZFIN:curator] xref: TAO:0001982 xref: ZFIN:ZDB-ANAT-100614-4 is_a: ZFA:0001582 ! non-Weberian precaudal vertebra relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-04-21T04:32:12Z [Term] id: ZFA:0005351 name: vertebra 9 namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 8." [ZFIN:curator] xref: TAO:0002149 xref: ZFIN:ZDB-ANAT-100614-5 is_a: ZFA:0001582 ! non-Weberian precaudal vertebra relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-04-21T04:32:37Z [Term] id: ZFA:0005352 name: vertebra 12 namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 11. May have hemal arch and rib." [ZFIN:ZDB-PUB-020807-1] xref: TAO:0002152 xref: ZFIN:ZDB-ANAT-100614-6 is_a: ZFA:0001582 ! non-Weberian precaudal vertebra relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-04-21T04:33:09Z [Term] id: ZFA:0005353 name: vertebra 10 namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 9." [ZFIN:curator] xref: TAO:0002150 xref: ZFIN:ZDB-ANAT-100614-7 is_a: ZFA:0001582 ! non-Weberian precaudal vertebra relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-04-21T04:33:57Z [Term] id: ZFA:0005354 name: vertebra 11 namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 10." [ZFIN:curator] xref: TAO:0002151 xref: ZFIN:ZDB-ANAT-100614-8 is_a: ZFA:0001582 ! non-Weberian precaudal vertebra relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-04-21T04:34:16Z [Term] id: ZFA:0005355 name: dorsal fin lepidotrichium 1 namespace: zebrafish_anatomy xref: TAO:0001754 xref: ZFIN:ZDB-ANAT-100614-9 is_a: ZFA:0001418 ! dorsal fin lepidotrichium relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-04-22T05:26:13Z [Term] id: ZFA:0005356 name: dorsal fin lepidotrichium 2 namespace: zebrafish_anatomy xref: TAO:0001755 xref: ZFIN:ZDB-ANAT-100614-10 is_a: ZFA:0001418 ! dorsal fin lepidotrichium relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-04-22T05:28:14Z [Term] id: ZFA:0005357 name: dorsal fin lepidotrichium 3 namespace: zebrafish_anatomy xref: TAO:0001756 xref: ZFIN:ZDB-ANAT-100614-11 is_a: ZFA:0001418 ! dorsal fin lepidotrichium relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-04-22T05:28:28Z [Term] id: ZFA:0005358 name: dorsal fin lepidotrichium 4 namespace: zebrafish_anatomy xref: TAO:0001757 xref: ZFIN:ZDB-ANAT-100614-12 is_a: ZFA:0001418 ! dorsal fin lepidotrichium relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-04-22T05:29:09Z [Term] id: ZFA:0005359 name: dorsal fin lepidotrichium 5 namespace: zebrafish_anatomy xref: TAO:0001758 xref: ZFIN:ZDB-ANAT-100614-13 is_a: ZFA:0001418 ! dorsal fin lepidotrichium relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-04-22T05:29:18Z [Term] id: ZFA:0005360 name: dorsal fin lepidotrichium 6 namespace: zebrafish_anatomy xref: TAO:0001759 xref: ZFIN:ZDB-ANAT-100614-14 is_a: ZFA:0001418 ! dorsal fin lepidotrichium relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-04-22T05:29:33Z [Term] id: ZFA:0005361 name: dorsal fin lepidotrichium 7 namespace: zebrafish_anatomy xref: TAO:0001760 xref: ZFIN:ZDB-ANAT-100614-15 is_a: ZFA:0001418 ! dorsal fin lepidotrichium relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-04-22T05:29:52Z [Term] id: ZFA:0005362 name: dorsal fin proximal radial 1 namespace: zebrafish_anatomy xref: TAO:0001818 xref: ZFIN:ZDB-ANAT-100614-16 is_a: ZFA:0000947 ! dorsal fin proximal radial relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005364 ! dorsal fin pterygiophore 1 relationship: start ZFS:0000039 ! Larval:Days 7-13 created_by: Ceri creation_date: 2010-04-22T05:39:57Z [Term] id: ZFA:0005363 name: dorsal fin proximal radial 2 namespace: zebrafish_anatomy xref: TAO:0001819 xref: ZFIN:ZDB-ANAT-100614-17 is_a: ZFA:0000947 ! dorsal fin proximal radial relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005365 ! dorsal fin pterygiophore 2 relationship: start ZFS:0000039 ! Larval:Days 7-13 created_by: Ceri creation_date: 2010-04-22T05:40:13Z [Term] id: ZFA:0005364 name: dorsal fin pterygiophore 1 namespace: zebrafish_anatomy def: "Dorsal fin pterygiophore that is the rostralmost pterygiophore of the dorsal fin." [TAO:curator] xref: TAO:0002094 xref: ZFIN:ZDB-ANAT-100614-18 is_a: ZFA:0001419 ! dorsal fin pterygiophore relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000039 ! Larval:Days 7-13 created_by: Ceri creation_date: 2010-04-22T05:47:57Z [Term] id: ZFA:0005365 name: dorsal fin pterygiophore 2 namespace: zebrafish_anatomy def: "Dorsal fin pterygiophore that is caudal to pterygiophore 1 of the dorsal fin." [ZFIN:curator] xref: TAO:0005365 xref: ZFIN:ZDB-ANAT-100614-19 is_a: ZFA:0001419 ! dorsal fin pterygiophore relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000039 ! Larval:Days 7-13 created_by: Ceri creation_date: 2010-04-22T05:48:12Z [Term] id: ZFA:0005366 name: dorsal fin pterygiophore 3 namespace: zebrafish_anatomy def: "Dorsal fin pterygiophore that is caudal to pterygiophore 2 of the dorsal fin." [ZFIN:ZDB-PUB-031103-13] xref: TAO:0005366 xref: ZFIN:ZDB-ANAT-100614-20 is_a: ZFA:0001419 ! dorsal fin pterygiophore relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000039 ! Larval:Days 7-13 created_by: Ceri creation_date: 2010-04-22T05:48:36Z [Term] id: ZFA:0005367 name: dorsal fin pterygiophore 4 namespace: zebrafish_anatomy def: "Dorsal fin pterygiophore that is caudal to pterygiophore 3 of the dorsal fin." [ZFIN:ZDB-PUB-031103-13] xref: TAO:0005367 xref: ZFIN:ZDB-ANAT-100614-21 is_a: ZFA:0001419 ! dorsal fin pterygiophore relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000039 ! Larval:Days 7-13 created_by: Ceri creation_date: 2010-04-22T05:48:48Z [Term] id: ZFA:0005368 name: dorsal fin pterygiophore 5 namespace: zebrafish_anatomy def: "Dorsal fin pterygiophore that is caudal to pterygiophore 4 of the dorsal fin." [ZFIN:ZDB-PUB-031103-13] xref: TAO:0005368 xref: ZFIN:ZDB-ANAT-100614-22 is_a: ZFA:0001419 ! dorsal fin pterygiophore relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000039 ! Larval:Days 7-13 created_by: Ceri creation_date: 2010-04-22T05:49:00Z [Term] id: ZFA:0005369 name: dorsal fin pterygiophore 6 namespace: zebrafish_anatomy def: "Dorsal fin pterygiophore that is caudal to pterygiophore 5 of the dorsal fin." [ZFIN:ZDB-PUB-031103-13] xref: TAO:0005369 xref: ZFIN:ZDB-ANAT-100614-23 is_a: ZFA:0001419 ! dorsal fin pterygiophore relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000039 ! Larval:Days 7-13 created_by: Ceri creation_date: 2010-04-22T05:49:26Z [Term] id: ZFA:0005370 name: dorsal fin pterygiophore 7 namespace: zebrafish_anatomy def: "Dorsal fin pterygiophore that is caudal to pterygiophore 6 of the dorsal fin." [ZFIN:ZDB-PUB-031103-13] xref: TAO:0005370 xref: ZFIN:ZDB-ANAT-100614-24 is_a: ZFA:0001419 ! dorsal fin pterygiophore relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000039 ! Larval:Days 7-13 created_by: Ceri creation_date: 2010-04-22T05:49:39Z [Term] id: ZFA:0005371 name: dorsal fin pterygiophore 8 namespace: zebrafish_anatomy def: "Dorsal fin pterygiophore that is caudal to pterygiophore 7 of the dorsal fin. The most caudal pterygiophore of the dorsal fin." [ZFIN:ZDB-PUB-031103-13] xref: TAO:0005371 xref: ZFIN:ZDB-ANAT-100614-25 is_a: ZFA:0001419 ! dorsal fin pterygiophore relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000039 ! Larval:Days 7-13 created_by: Ceri creation_date: 2010-04-22T05:53:09Z [Term] id: ZFA:0005372 name: dorsal fin distal radial 1 namespace: zebrafish_anatomy xref: TAO:0005372 xref: ZFIN:ZDB-ANAT-100614-26 is_a: ZFA:0000936 ! dorsal fin distal radial relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005364 ! dorsal fin pterygiophore 1 relationship: start ZFS:0000039 ! Larval:Days 7-13 created_by: Ceri creation_date: 2010-04-22T05:54:49Z [Term] id: ZFA:0005373 name: dorsal fin distal radial 2 namespace: zebrafish_anatomy xref: TAO:0005373 xref: ZFIN:ZDB-ANAT-100614-27 is_a: ZFA:0000936 ! dorsal fin distal radial relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005365 ! dorsal fin pterygiophore 2 relationship: start ZFS:0000039 ! Larval:Days 7-13 created_by: Ceri creation_date: 2010-04-22T05:55:31Z [Term] id: ZFA:0005374 name: dorsal fin distal radial 3 namespace: zebrafish_anatomy xref: TAO:0005374 xref: ZFIN:ZDB-ANAT-100614-28 is_a: ZFA:0000936 ! dorsal fin distal radial relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005366 ! dorsal fin pterygiophore 3 relationship: start ZFS:0000039 ! Larval:Days 7-13 created_by: Ceri creation_date: 2010-04-22T05:57:11Z [Term] id: ZFA:0005375 name: dorsal fin distal radial 4 namespace: zebrafish_anatomy xref: TAO:0005375 xref: ZFIN:ZDB-ANAT-100614-29 is_a: ZFA:0000936 ! dorsal fin distal radial relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005367 ! dorsal fin pterygiophore 4 relationship: start ZFS:0000039 ! Larval:Days 7-13 created_by: Ceri creation_date: 2010-04-22T05:57:21Z [Term] id: ZFA:0005376 name: dorsal fin distal radial 5 namespace: zebrafish_anatomy xref: TAO:0005376 xref: ZFIN:ZDB-ANAT-100614-30 is_a: ZFA:0000936 ! dorsal fin distal radial relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005368 ! dorsal fin pterygiophore 5 relationship: start ZFS:0000039 ! Larval:Days 7-13 created_by: Ceri creation_date: 2010-04-22T05:57:32Z [Term] id: ZFA:0005377 name: dorsal fin distal radial 6 namespace: zebrafish_anatomy xref: TAO:0005377 xref: ZFIN:ZDB-ANAT-100614-31 is_a: ZFA:0000936 ! dorsal fin distal radial relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005369 ! dorsal fin pterygiophore 6 relationship: start ZFS:0000039 ! Larval:Days 7-13 created_by: Ceri creation_date: 2010-04-22T05:57:48Z [Term] id: ZFA:0005378 name: dorsal fin distal radial 7 namespace: zebrafish_anatomy xref: TAO:0005378 xref: ZFIN:ZDB-ANAT-100614-32 is_a: ZFA:0000936 ! dorsal fin distal radial relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005370 ! dorsal fin pterygiophore 7 relationship: start ZFS:0000039 ! Larval:Days 7-13 created_by: Ceri creation_date: 2010-04-22T05:58:04Z [Term] id: ZFA:0005379 name: dorsal fin distal radial 8 namespace: zebrafish_anatomy xref: TAO:0005379 xref: ZFIN:ZDB-ANAT-100614-33 is_a: ZFA:0000936 ! dorsal fin distal radial relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005371 ! dorsal fin pterygiophore 8 relationship: start ZFS:0000039 ! Larval:Days 7-13 created_by: Ceri creation_date: 2010-04-22T05:58:19Z [Term] id: ZFA:0005380 name: dorsal fin proximal radial 3 namespace: zebrafish_anatomy xref: TAO:0005380 xref: ZFIN:ZDB-ANAT-100614-34 is_a: ZFA:0000947 ! dorsal fin proximal radial relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005366 ! dorsal fin pterygiophore 3 relationship: start ZFS:0000039 ! Larval:Days 7-13 created_by: Ceri creation_date: 2010-04-22T05:58:39Z [Term] id: ZFA:0005381 name: dorsal fin proximal radial 4 namespace: zebrafish_anatomy xref: TAO:0005381 xref: ZFIN:ZDB-ANAT-100614-35 is_a: ZFA:0000947 ! dorsal fin proximal radial relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005367 ! dorsal fin pterygiophore 4 relationship: start ZFS:0000039 ! Larval:Days 7-13 created_by: Ceri creation_date: 2010-04-22T05:59:08Z [Term] id: ZFA:0005382 name: dorsal fin proximal radial 5 namespace: zebrafish_anatomy xref: TAO:0005382 xref: ZFIN:ZDB-ANAT-100614-36 is_a: ZFA:0000947 ! dorsal fin proximal radial relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005368 ! dorsal fin pterygiophore 5 relationship: start ZFS:0000039 ! Larval:Days 7-13 created_by: Ceri creation_date: 2010-04-22T05:59:20Z [Term] id: ZFA:0005383 name: dorsal fin proximal radial 6 namespace: zebrafish_anatomy xref: TAO:0005383 xref: ZFIN:ZDB-ANAT-100614-37 is_a: ZFA:0000947 ! dorsal fin proximal radial relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005369 ! dorsal fin pterygiophore 6 relationship: start ZFS:0000039 ! Larval:Days 7-13 created_by: Ceri creation_date: 2010-04-22T05:59:30Z [Term] id: ZFA:0005384 name: dorsal fin proximal radial 7 namespace: zebrafish_anatomy xref: TAO:0005384 xref: ZFIN:ZDB-ANAT-100614-38 is_a: ZFA:0000947 ! dorsal fin proximal radial relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005370 ! dorsal fin pterygiophore 7 relationship: start ZFS:0000039 ! Larval:Days 7-13 created_by: Ceri creation_date: 2010-04-22T05:59:42Z [Term] id: ZFA:0005385 name: dorsal fin proximal radial 8 namespace: zebrafish_anatomy xref: TAO:0005385 xref: ZFIN:ZDB-ANAT-100614-39 is_a: ZFA:0000947 ! dorsal fin proximal radial relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005371 ! dorsal fin pterygiophore 8 relationship: start ZFS:0000039 ! Larval:Days 7-13 created_by: Ceri creation_date: 2010-04-22T05:59:54Z [Term] id: ZFA:0005386 name: foramen namespace: zebrafish_anatomy def: "Anatomical space that is an opening in a bone, usually for passage of blood vessels or nerves." [TAO:curator] xref: TAO:0001736 xref: ZFIN:ZDB-ANAT-100614-40 is_a: ZFA:0001643 ! anatomical space relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-04-23T11:01:27Z [Term] id: ZFA:0005387 name: foramen magnum namespace: zebrafish_anatomy def: "Foramen in the occipital region of neurocranium to allow passage of spinal cord." [TAO:curator] xref: TAO:0002045 xref: ZFIN:ZDB-ANAT-100614-41 is_a: ZFA:0005386 ! foramen relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-04-23T11:02:49Z [Term] id: ZFA:0005388 name: fossa namespace: zebrafish_anatomy def: "Anatomical space that is a concavity, shallow depression, or groove on a bone." [TAO:curator] xref: TAO:0001743 xref: ZFIN:ZDB-ANAT-100614-42 is_a: ZFA:0001643 ! anatomical space relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-04-23T11:04:59Z [Term] id: ZFA:0005389 name: gill opening namespace: zebrafish_anatomy def: "Anatomical space that is the external opening of a gill slit connecting the pharyngeal cavity to the exterior. Gill opening is usually paired and located on the lateral or ventral surfaces of the head." [TAO:curator] xref: TAO:0002057 xref: ZFIN:ZDB-ANAT-100614-43 is_a: ZFA:0001643 ! anatomical space relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-04-23T11:06:34Z [Term] id: ZFA:0005390 name: gill ray namespace: zebrafish_anatomy def: "Gill ray is a slender, usually rod-like cartilage within a gill filament and ligamentously tied to its associated pharyngeal arch bone or cartilage." [TAO:curator] xref: TAO:0001856 xref: ZFIN:ZDB-ANAT-100614-44 is_a: ZFA:0001460 ! pharyngeal arch cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001613 ! pharyngeal arch 3-7 relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-04-23T11:17:01Z [Term] id: ZFA:0005391 name: head sensory canal system namespace: zebrafish_anatomy def: "Lateral line system on head and pectoral girdle." [TAO:curator] xref: TAO:0001873 xref: ZFIN:ZDB-ANAT-100614-45 is_a: ZFA:0001468 ! anterior lateral line system relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-04-23T01:42:45Z [Term] id: ZFA:0005392 name: infraorbital sensory canal namespace: zebrafish_anatomy def: "Sensory canal associated with the infraorbital bones. Located in close proximity to the otic and supraorbital sensory canals at their union. The infraorbital sensory canal is bilaterally paired. The canal has 3 pores. The first opens dorsally below the nasal sac, the second opens laterally posterior to the anterior maxilary barbel, the third pore is present where infraorbital 1 meets infraorbital 2." [ZFIN:ZDB-PUB-961014-192] xref: TAO:0001811 xref: ZFIN:ZDB-ANAT-100614-46 is_a: ZFA:0005443 ! sensory canal relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005391 ! head sensory canal system relationship: start ZFS:0000040 ! Larval:Days 14-20 created_by: Ceri creation_date: 2010-04-23T01:44:27Z [Term] id: ZFA:0005393 name: otic sensory canal namespace: zebrafish_anatomy def: "Sensory canal between and in close proximity posteriorly with the post-otic and preoperculo-mandibular sensory canals, and anteriorly with the supraorbital and infraorbital sensory canals. The otic sensory canal is bilaterally paired." [TAO:curator] xref: TAO:0001629 xref: ZFIN:ZDB-ANAT-100614-47 is_a: ZFA:0005443 ! sensory canal relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005391 ! head sensory canal system relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-04-23T01:45:04Z [Term] id: ZFA:0005394 name: post-otic sensory canal namespace: zebrafish_anatomy def: "Sensory canal that forms dorsal to the horizontal semicircular canal of the ear. The anterior end of the canal may span or remain posterior to the pterotic-sphenotic junction. The posterior end of the postotic canal meets the temporal and supratemporal canals. The canal lies between and in close proximity to the trunk sensory canal and anteriorly with the otic and preoperculo-mandibular sensory canals. The post-otic sensory canal is bilaterally paired and when mature is fully enclosed in bone." [TAO:curator, ZFIN:ZDB-PUB-961014-192] synonym: "postotic sensory canal" EXACT [ZFIN:ZDB-PUB-961014-192] xref: TAO:0001619 xref: ZFIN:ZDB-ANAT-100614-48 is_a: ZFA:0005443 ! sensory canal relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005391 ! head sensory canal system relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-04-23T01:45:48Z [Term] id: ZFA:0005395 name: preoperculo-mandibular sensory canal namespace: zebrafish_anatomy def: "Sensory canal lateral or ventral to and in close proximity to the otic and post-otic sensory canals at their union. The preoperculo-mandibular sensory canal is bilaterally paired and associated with the preopercle, angular and dentary bones." [TAO:curator] xref: TAO:0001812 xref: ZFIN:ZDB-ANAT-100614-49 is_a: ZFA:0005443 ! sensory canal relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005391 ! head sensory canal system relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-04-23T01:59:39Z [Term] id: ZFA:0005396 name: supraorbital sensory canal namespace: zebrafish_anatomy def: "Sensory canal contained in the nasal and frontal bones. It contains 4 or 5 neuromast. The first neuromast is positioned in the tubular nasal bone and the other neuromasts are located in the frontal bone. The canal is anterior to and in close proximity to the otic and infraorbital sensory canals. The supraorbital sensory canal is bilaterally paired." [TAO:curator, ZFIN:ZDB-PUB-031103-11] xref: TAO:0001810 xref: ZFIN:ZDB-ANAT-100614-50 is_a: ZFA:0005443 ! sensory canal relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005391 ! head sensory canal system relationship: start ZFS:0000041 ! Larval:Days 21-29 created_by: Ceri creation_date: 2010-04-23T02:00:48Z [Term] id: ZFA:0005397 name: hyoideomandibular nerve namespace: zebrafish_anatomy def: "Nerve that is a branch of cranial nerve VII that passes through or around the suspensorium to innervate muscles and sensory organs on or near pharyngeal arch 2." [TAO:curator] xref: TAO:0002010 xref: ZFIN:ZDB-ANAT-100614-51 is_a: ZFA:0007009 ! nerve relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000664 ! cranial nerve VII relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-04-23T02:54:34Z [Term] id: ZFA:0005398 name: anal fin actinotrichium namespace: zebrafish_anatomy def: "Actinotrichium that is part of the anal fin skeleton." [TAO:curator] synonym: "anal fin actinotricia" EXACT PLURAL [] xref: TAO:0000375 xref: ZFIN:ZDB-ANAT-100614-52 is_a: ZFA:0005435 ! actinotrichium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001162 ! anal fin relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-04-23T04:54:17Z [Term] id: ZFA:0005399 name: anal fin lepidotrichium 1 namespace: zebrafish_anatomy xref: TAO:0001769 xref: ZFIN:ZDB-ANAT-100614-53 is_a: ZFA:0001421 ! anal fin lepidotrichium relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-04-23T04:57:18Z [Term] id: ZFA:0005400 name: anal fin lepidotrichium 2 namespace: zebrafish_anatomy xref: TAO:0001770 xref: ZFIN:ZDB-ANAT-100614-54 is_a: ZFA:0001421 ! anal fin lepidotrichium relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-04-23T04:57:31Z [Term] id: ZFA:0005401 name: anal fin lepidotrichium 3 namespace: zebrafish_anatomy xref: TAO:0001771 xref: ZFIN:ZDB-ANAT-100614-55 is_a: ZFA:0001421 ! anal fin lepidotrichium relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-04-23T04:57:43Z [Term] id: ZFA:0005402 name: anal fin lepidotrichium 4 namespace: zebrafish_anatomy xref: TAO:0001772 xref: ZFIN:ZDB-ANAT-100614-56 is_a: ZFA:0001421 ! anal fin lepidotrichium relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-04-23T04:57:55Z [Term] id: ZFA:0005403 name: anal fin lepidotrichium 5 namespace: zebrafish_anatomy xref: TAO:0001773 xref: ZFIN:ZDB-ANAT-100614-57 is_a: ZFA:0001421 ! anal fin lepidotrichium relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-04-23T04:58:07Z [Term] id: ZFA:0005404 name: anal fin lepidotrichium 6 namespace: zebrafish_anatomy xref: TAO:0001774 xref: ZFIN:ZDB-ANAT-100614-58 is_a: ZFA:0001421 ! anal fin lepidotrichium relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-04-23T04:58:19Z [Term] id: ZFA:0005405 name: anal fin lepidotrichium 7 namespace: zebrafish_anatomy xref: TAO:0001775 xref: ZFIN:ZDB-ANAT-100614-59 is_a: ZFA:0001421 ! anal fin lepidotrichium relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-04-23T04:58:32Z [Term] id: ZFA:0005406 name: anterior myodome namespace: zebrafish_anatomy def: "Fossa or chamber on anterior portion of orbital region of neurocranium that serves as attachment site for anterior extrinsic eye musculature." [TAO:curator] xref: TAO:0001927 xref: ZFIN:ZDB-ANAT-100614-560 is_a: ZFA:0005388 ! fossa relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-04-23T05:11:17Z [Term] id: ZFA:0005407 name: anterior nasal barbel namespace: zebrafish_anatomy def: "Barbel that is associated with the anterior nostril. Anterior nasal barbel is paired." [TAO:curator] xref: TAO:0001937 xref: ZFIN:ZDB-ANAT-100614-61 is_a: ZFA:0000622 ! barbel relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-04-23T05:12:00Z [Term] id: ZFA:0005408 name: maxillary barbel namespace: zebrafish_anatomy def: "Barbel that is attached to the distal end of the maxilla and that originates on the side of the mouth. Maxillary barbel is paired." [TAO:curator] xref: TAO:0001938 xref: ZFIN:ZDB-ANAT-100614-62 is_a: ZFA:0000622 ! barbel relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-04-23T05:13:52Z [Term] id: ZFA:0005409 name: pars superior ear namespace: zebrafish_anatomy def: "The dorsal part of the ear. Comprises the three semicircular canals, which connect to the utricle." [ZFIN:curator] xref: TAO:0005409 xref: ZFIN:ZDB-ANAT-100614-63 is_a: ZFA:0001512 ! anatomical group relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000217 ! inner ear relationship: start ZFS:0000000 ! Unknown created_by: ceri creation_date: 2010-05-17T10:43:19Z [Term] id: ZFA:0005410 name: pars inferior ear namespace: zebrafish_anatomy def: "The ventral portion of the ear. It contains the saccule and the laguena which are the primary auditory organs." [ZFIN:curator] xref: TAO:0005410 xref: ZFIN:ZDB-ANAT-100614-64 is_a: ZFA:0001512 ! anatomical group relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000217 ! inner ear relationship: start ZFS:0000000 ! Unknown created_by: ceri creation_date: 2010-05-17T10:51:56Z [Term] id: ZFA:0005411 name: common crus namespace: zebrafish_anatomy def: "Duct that forms when the nonampullary ends of the posterior and anterior semicircular canals merge. The common curs descends connecting the semicircular canals to the horizontal canal." [ZFIN:ZDB-PUB-010912-7, ZFIN:ZDB-PUB-020403-4] xref: TAO:0005411 xref: ZFIN:ZDB-ANAT-100614-65 is_a: ZFA:0005171 ! duct relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005409 ! pars superior ear relationship: start ZFS:0000000 ! Unknown created_by: ceri creation_date: 2010-05-17T11:03:13Z [Term] id: ZFA:0005412 name: transverse canal namespace: zebrafish_anatomy def: "Duct that crosses the midline connecting the sacculi." [ZFIN:curator] xref: TAO:0005412 xref: ZFIN:ZDB-ANAT-100614-66 is_a: ZFA:0005171 ! duct relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001138 ! vestibuloauditory system relationship: start ZFS:0000040 ! Larval:Days 14-20 created_by: ceri creation_date: 2010-05-17T03:08:14Z [Term] id: ZFA:0005413 name: perilymph namespace: zebrafish_anatomy def: "Portion of organism substance that is an extracellular fluid that has a low potassium concentration." [ZFIN:ZDB-PUB-010912-7] xref: TAO:0005413 xref: ZFIN:ZDB-ANAT-100614-67 is_a: ZFA:0001487 ! portion of organism substance relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: ceri creation_date: 2010-05-17T03:11:11Z [Term] id: ZFA:0005414 name: endolymph namespace: zebrafish_anatomy def: "The portion of organism substance that is an extracellular fluid that has a high potassium and sodium concentration. It bathes the hair cells and is thought to be generated by the semicircular canal epithelium." [ZFIN:ZDB-PUB-090731-6] xref: TAO:0005414 xref: ZFIN:ZDB-ANAT-100614-68 is_a: ZFA:0001487 ! portion of organism substance relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000217 ! inner ear relationship: start ZFS:0000000 ! Unknown created_by: ceri creation_date: 2010-05-17T03:11:30Z [Term] id: ZFA:0005415 name: inner ear foramen namespace: zebrafish_anatomy def: "Foramen in the inner ear." [ZFIN:curator] xref: TAO:0005415 xref: ZFIN:ZDB-ANAT-100614-69 is_a: ZFA:0005386 ! foramen relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000217 ! inner ear relationship: start ZFS:0000000 ! Unknown created_by: ceri creation_date: 2010-05-18T11:11:52Z [Term] id: ZFA:0005416 name: sacculoagenar foramen namespace: zebrafish_anatomy def: "Inner ear foramen that connects the lagena to the caudal half of the saccule." [ZFIN:ZDB-PUB-020403-4] xref: TAO:0005416 xref: ZFIN:ZDB-ANAT-100614-70 is_a: ZFA:0005415 ! inner ear foramen relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: ceri creation_date: 2010-05-19T07:13:29Z [Term] id: ZFA:0005417 name: utriculosaccular foramen def: "Inner ear foramen that connects the rostral saccula to the utricle." [ZFIN:ZDB-PUB-020403-4] xref: ZFIN:ZDB-ANAT-100614-71 is_a: ZFA:0005415 ! inner ear foramen relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: ceri creation_date: 2010-05-19T07:15:09Z [Term] id: ZFA:0005418 name: auditory fenestra namespace: zebrafish_anatomy def: "Opening in the neurocranium to allow communication between the swimbladder and the inner ear." [TAO:curator] xref: TAO:0002066 xref: ZFIN:ZDB-ANAT-100614-72 is_a: ZFA:0005386 ! foramen relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-05-25T05:28:33Z [Term] id: ZFA:0005419 name: auditory foramen namespace: zebrafish_anatomy def: "Foramen through which cranial nerve VIII (auditory) exits." [TAO:curator] xref: TAO:0001742 xref: ZFIN:ZDB-ANAT-100614-73 is_a: ZFA:0005386 ! foramen relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-05-25T05:29:43Z [Term] id: ZFA:0005420 name: autopalatine-lateral ethmoid joint namespace: zebrafish_anatomy def: "Joint that articulates the autopalatine and lateral ethmoid and bones. Autopalatine-lateral ethmoid joint is paired." [TAO:curator] xref: TAO:0001608 xref: ZFIN:ZDB-ANAT-100614-74 is_a: ZFA:0001596 ! joint relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-05-25T05:31:28Z [Term] id: ZFA:0005421 name: autopalatine-maxillary joint namespace: zebrafish_anatomy def: "Joint that articulates the autopalatine cartilage or bone and maxilla." [TAO:curator] xref: TAO:0001942 xref: ZFIN:ZDB-ANAT-100614-75 is_a: ZFA:0001596 ! joint relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-05-25T05:32:51Z [Term] id: ZFA:0005422 name: autopalatine-vomer joint namespace: zebrafish_anatomy def: "Joint that articulates autopalatine and vomer bones. Autopalatine vomer joint is paired." [TAO:curator] xref: TAO:0001784 xref: ZFIN:ZDB-ANAT-100614-76 is_a: ZFA:0001596 ! joint relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-05-25T05:34:03Z [Term] id: ZFA:0005423 name: basioccipital-exoccipital joint namespace: zebrafish_anatomy def: "Joint that articulates the basioccipital and exoccipital. Basioccipital exoccipital joint is paired." [TAO:curator] xref: TAO:0002038 xref: ZFIN:ZDB-ANAT-100614-77 is_a: ZFA:0001596 ! joint relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-05-25T05:55:17Z [Term] id: ZFA:0005424 name: caudal fin actinotrichium namespace: zebrafish_anatomy def: "Actinotrichium that is part of the caudal fin skeleton." [TAO:curator] synonym: "caudal fin actinotrichia" EXACT PLURAL [] xref: TAO:0000437 xref: ZFIN:ZDB-ANAT-100614-78 is_a: ZFA:0005435 ! actinotrichium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001058 ! caudal fin relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-05-25T06:07:35Z [Term] id: ZFA:0005425 name: serous membrane namespace: zebrafish_anatomy def: "A multi-tissue structure that is comprised of a secretory epithelial layer and a connective tissue layer." [http://en.wikipedia.org/wiki/Serous_membrane] xref: TAO:0005425 xref: ZFIN:ZDB-ANAT-100614-79 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000028 ! Segmentation:26+ somites created_by: Ceri creation_date: 2010-05-26T10:36:36Z [Term] id: ZFA:0005426 name: coracoid foramen namespace: zebrafish_anatomy def: "Foramen that is located in the coracoid." [TAO:curator] xref: TAO:0001737 xref: ZFIN:ZDB-ANAT-100614-80 is_a: ZFA:0005386 ! foramen relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-05-26T01:35:35Z [Term] id: ZFA:0005427 name: dentary foramen namespace: zebrafish_anatomy def: "Foramen located on the dentary for passage of the mandibular nerve." [TAO:curator] xref: TAO:0002012 xref: ZFIN:ZDB-ANAT-100614-81 is_a: ZFA:0005386 ! foramen relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-05-26T01:36:29Z [Term] id: ZFA:0005428 name: optic foramen namespace: zebrafish_anatomy def: "Foramen in the orbital region of the neurocranium for the passage of the optic nerve (cranial nerve II)." [TAO:curator] synonym: "optic nerve (II) foramen" EXACT [ZFIN:ZDB-PUB-961014-192] xref: TAO:0002025 xref: ZFIN:ZDB-ANAT-100614-82 is_a: ZFA:0005386 ! foramen relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-05-26T02:34:08Z [Term] id: ZFA:0005429 name: olfactory nerve foramen namespace: zebrafish_anatomy def: "Foramen for the passage of the olfactory nerve or cranial nerve 1." [TAO:curator] xref: TAO:0001804 xref: ZFIN:ZDB-ANAT-100614-83 is_a: ZFA:0005386 ! foramen relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-05-26T02:35:17Z [Term] id: ZFA:0005430 name: orbital foramen namespace: zebrafish_anatomy def: "Foramen in the bone or cartilage comprising the anterior wall of the orbit, and through which passes at least the deep ophthalmic branch of cranial nerve V (trigeminal)." [TAO:curator] xref: TAO:0002031 xref: ZFIN:ZDB-ANAT-100614-84 is_a: ZFA:0005386 ! foramen relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-05-26T02:36:02Z [Term] id: ZFA:0005431 name: scapular foramen namespace: zebrafish_anatomy def: "Foramen that is located in the scapula. The scapular foramen is paired and formed by a ring of bone." [TAO:curator] xref: TAO:0001735 xref: ZFIN:ZDB-ANAT-100614-85 is_a: ZFA:0005386 ! foramen relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-05-26T02:37:13Z [Term] id: ZFA:0005432 name: superficial ophthalmic nerve foramen namespace: zebrafish_anatomy def: "Foramen through which the superficial ophthalmic nerve passes." [TAO:curator] xref: TAO:0001748 xref: ZFIN:ZDB-ANAT-100614-86 is_a: ZFA:0005386 ! foramen relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-05-26T02:38:20Z [Term] id: ZFA:0005433 name: mental barbel namespace: zebrafish_anatomy def: "Barbel that originates on the chin." [TAO:curator] xref: TAO:0002024 xref: ZFIN:ZDB-ANAT-100614-87 is_a: ZFA:0000622 ! barbel relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-05-26T05:43:41Z [Term] id: ZFA:0005434 name: tooth cusp namespace: zebrafish_anatomy def: "Acellular anatomical structure that is a natural outgrowth, prominence, or point that is part of the surface of a tooth." [TAO:curator] xref: TAO:0001973 xref: ZFIN:ZDB-ANAT-100614-88 is_a: ZFA:0000382 ! acellular anatomical structure relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000033 ! Hatching:Long-pec created_by: Ceri creation_date: 2010-05-26T06:11:37Z [Term] id: ZFA:0005435 name: actinotrichium namespace: zebrafish_anatomy def: "Portion of tissue which is a slender, horny, flexible, unsegmented fibril which provide structural support to fin folds or fins. Actinotrichia are translucent, exhibit birefringence (double refraction) and are composed of the scleroprotein elastoidine." [ZFIN:curator] synonym: "actinotrichia" EXACT PLURAL [] xref: TAO:0000089 xref: ZFIN:ZDB-ANAT-100614-89 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000029 ! Pharyngula:Prim-5 created_by: Ceri creation_date: 2010-06-08T04:31:42Z [Term] id: ZFA:0005436 name: pectoral fin nerve namespace: zebrafish_anatomy def: "Nerve that is part of the pectoral fin." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-100805-1 is_a: ZFA:0007009 ! nerve relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-06-20T10:18:37Z [Term] id: ZFA:0005437 name: pectoral fin motor nerve namespace: zebrafish_anatomy def: "Motor nerve that is located in the pectoral fin." [ZFIN:ZDB-PUB-070726-9] xref: ZFIN:ZDB-ANAT-100805-2 is_a: ZFA:0005436 ! pectoral fin nerve relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-06-20T10:19:45Z [Term] id: ZFA:0005438 name: pectoral fin sensory nerve namespace: zebrafish_anatomy def: "Sensory nerve that innervates the pectoral fin." [ZFIN:ZDB-PUB-070726-9] xref: ZFIN:ZDB-ANAT-100805-3 is_a: ZFA:0005436 ! pectoral fin nerve relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-06-20T10:21:38Z [Term] id: ZFA:0005439 name: pectoral fin motor nerve 1 namespace: zebrafish_anatomy def: "Pectoral fin motor nerve that enters the fin from the dorsal side of the fin rostral of all other motor nerves and innervates the dorsal side of the pectoral fin." [ZFIN:ZDB-PUB-070726-9] xref: ZFIN:ZDB-ANAT-100805-4 is_a: ZFA:0005437 ! pectoral fin motor nerve relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000034 ! Hatching:Pec-fin created_by: Ceri creation_date: 2010-06-20T10:22:40Z [Term] id: ZFA:0005440 name: pectoral fin motor nerve 2 namespace: zebrafish_anatomy def: "Pectoral fin motor nerve that enters the fin from the dorsal side of the fin caudal of nerve 1 and rostral of all other motor nerves and innervates the dorsal side of the pectoral fin." [ZFIN:ZDB-PUB-070726-9] xref: ZFIN:ZDB-ANAT-100805-5 is_a: ZFA:0005437 ! pectoral fin motor nerve relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000034 ! Hatching:Pec-fin created_by: Ceri creation_date: 2010-06-20T10:27:40Z [Term] id: ZFA:0005441 name: pectoral fin motor nerve 3 namespace: zebrafish_anatomy def: "Pectoral fin motor nerve that enters the fin from the dorsal side of the fin caudal of nerve 1 and 2 and rostral of nerve 4 and innervates the dorsal side of the pectoral fin." [ZFIN:ZDB-PUB-070726-9] xref: ZFIN:ZDB-ANAT-100805-6 is_a: ZFA:0005437 ! pectoral fin motor nerve relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000034 ! Hatching:Pec-fin created_by: Ceri creation_date: 2010-06-20T10:28:55Z [Term] id: ZFA:0005442 name: articular fossa of opercle namespace: zebrafish_anatomy def: "Fossa of opercle that articulates with hyomandibular condyle for opercle." [TAO:curator] xref: TAO:0001928 xref: ZFIN:ZDB-ANAT-100805-7 is_a: ZFA:0005388 ! fossa relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-06-24T02:57:49Z [Term] id: ZFA:0005443 name: sensory canal namespace: zebrafish_anatomy def: "Multi-tissue structure that is a fluid-filled canal in the integument and usually dermal bones, and contains one or more neuromasts." [TAO:curator] xref: TAO:0001612 xref: ZFIN:ZDB-ANAT-100805-8 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000034 ! lateral line system relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-06-24T05:31:47Z [Term] id: ZFA:0005444 name: trunk sensory canal namespace: zebrafish_anatomy def: "Sensory canal on trunk which is posterior to the pectoral girdle and often reaching to the caudal fin. The trunk sensory canal is bilaterally paired." [TAO:curator] xref: TAO:0001617 xref: ZFIN:ZDB-ANAT-100805-9 is_a: ZFA:0005443 ! sensory canal relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-06-24T05:39:49Z [Term] id: ZFA:0005445 name: supratemporal sensory canal namespace: zebrafish_anatomy def: "Sensory canal that crosses over the dorsal midline and in close proximity to the contralateral post-otic sensory canals. The supratemporal sensory canal is unpaired." [TAO:curator] xref: TAO:0001630 xref: ZFIN:ZDB-ANAT-100805-10 is_a: ZFA:0005443 ! sensory canal relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-06-25T10:45:28Z [Term] id: ZFA:0005446 name: neuromast foramen namespace: zebrafish_anatomy def: "Foramen in a bone that is part of a sensory canal." [ZFIN:ZDB-PUB-961014-192] xref: ZFIN:ZDB-ANAT-100805-11 is_a: ZFA:0005386 ! foramen relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005443 ! sensory canal relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-06-28T10:26:50Z [Term] id: ZFA:0005447 name: sensory canal tubule namespace: zebrafish_anatomy def: "Sensory canal that is a side branch between a sensory canal proximally and a pore at its distal end. Sensory canal tubule is bilaterally paired although often imperfectly so." [TAO:curator] xref: TAO:0001933 xref: ZFIN:ZDB-ANAT-100805-12 is_a: ZFA:0005443 ! sensory canal relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-06-25T10:46:49Z [Term] id: ZFA:0005448 name: preopercular sensory canal namespace: zebrafish_anatomy def: "Sensory canal associated with the preopercle bone. It lies in close proximity with the otic and post-otic sensory canals at their union, and anteroventrally with the mandibular sensory canal. The preopercular sensory canal is bilaterally paired." [ZFIN:curator] xref: TAO:0001813 xref: ZFIN:ZDB-ANAT-100805-13 is_a: ZFA:0005443 ! sensory canal relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005395 ! preoperculo-mandibular sensory canal relationship: start ZFS:0000041 ! Larval:Days 21-29 created_by: Ceri creation_date: 2010-06-25T10:58:48Z [Term] id: ZFA:0005449 name: pore namespace: zebrafish_anatomy def: "An anatomical space that is an opening, usually at the end of a canal or duct, on the surface of the integument or the lining of an internal anatomical space." [TAO:curator] xref: TAO:0001791 xref: ZFIN:ZDB-ANAT-100805-14 is_a: ZFA:0001643 ! anatomical space relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-06-28T11:08:35Z [Term] id: ZFA:0005450 name: pectoral fin motor nerve 4 namespace: zebrafish_anatomy def: "Pectoral fin motor nerve that enters the fin from the ventral side of the fin and innervates the ventral side of the pectoral fin." [ZFIN:ZDB-PUB-070726-9] xref: ZFIN:ZDB-ANAT-100805-15 is_a: ZFA:0005437 ! pectoral fin motor nerve relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000034 ! Hatching:Pec-fin created_by: Ceri creation_date: 2010-06-28T01:47:43Z [Term] id: ZFA:0005451 name: mandibular sensory canal namespace: zebrafish_anatomy def: "Sensory canal associated with the angular and dentary bones. Located anterior and ventral to and in close proximity with the preoperculo-mandibular sensory canal. The mandible sensory canal is bilaterally paired and does not meet at the mandibular symphysis. The mandibular lateral line canal has 3 neuromast located between the canal pores. Two neuromast are located in the portion of the can in the dentary bone. The third neuromast is located in the anguloarticular bone. The rostral end of the canal has a terminal pore adjacent to the mandibular symphysis. There are three more pores, two, at the posterior of the dentary and the anterior of the anguloarticular share a common epithelial pore." [TAO:curator, ZFIN:ZDB-PUB-031103-11] xref: TAO:0001814 xref: ZFIN:ZDB-ANAT-100805-16 is_a: ZFA:0005443 ! sensory canal relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005395 ! preoperculo-mandibular sensory canal relationship: start ZFS:0000042 ! Juvenile:Days 30-44 created_by: Ceri creation_date: 2010-06-25T12:27:58Z [Term] id: ZFA:0005452 name: tract of the caudal commissure namespace: zebrafish_anatomy synonym: "tract of the posterior commissure" EXACT [ZFIN:ZDB-PUB-961014-421] xref: ZFIN:ZDB-ANAT-100805-17 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000320 ! caudal commissure relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-21T01:49:43Z [Term] id: ZFA:0005453 name: basicapsular fenestra namespace: zebrafish_anatomy def: "Opening in the prootic." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-100805-18 is_a: ZFA:0005386 ! foramen relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-06-25T05:40:06Z [Term] id: ZFA:0005454 name: subtemporal fossa namespace: zebrafish_anatomy def: "Fossa where the anteromedial rim is formed by the prootic, the remainder of the fossa is formed by the exoccipital and pterotic." [ZFIN:ZDB-PUB-961014-192] xref: TAO:0001974 xref: ZFIN:ZDB-ANAT-100805-19 is_a: ZFA:0005388 ! fossa relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-06-25T05:47:28Z [Term] id: ZFA:0005455 name: prootic foramen namespace: zebrafish_anatomy def: "Foramen formed between the anterolateral extension of the prootic that contacts the pterosphenoid the prootic and the pterosphenoid." [ZFIN:ZDB-PUB-961014-192] synonym: "anterior trigemino-facialis foramen of Howes" EXACT [] synonym: "trigeminal notch of Harrington" EXACT [] xref: ZFIN:ZDB-ANAT-100805-20 is_a: ZFA:0005386 ! foramen relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-06-25T05:53:27Z [Term] id: ZFA:0005456 name: sinus impar namespace: zebrafish_anatomy def: "Perilymphatic compartment of the zebrafish ear. Chamber positioned ventral of the medulla, the anterior end surrounds the posterior portion of the transverse canal." [ZFIN:ZDB-PUB-010912-7] xref: ZFIN:ZDB-ANAT-100805-21 is_a: ZFA:0005459 ! perilymphatic space relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-21T02:01:50Z [Term] id: ZFA:0005457 name: dorsal hypohyal-urohyal joint namespace: zebrafish_anatomy def: "Joint that articulates the dorsal hypohyal and urohyal bones. Dorsal hypohyal-urohyal joint is paired." [TAO:curator] xref: TAO:0001847 xref: ZFIN:ZDB-ANAT-100805-22 is_a: ZFA:0001596 ! joint relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-21T02:02:25Z [Term] id: ZFA:0005458 name: dorsal hypohyal-ventral hypohyal joint namespace: zebrafish_anatomy def: "Joint that articulates the dorsal hypohyal and ventral hypohyal bones. Dorsal hypohyal-ventral hypohyal joint is paired." [TAO:curator] xref: TAO:0001845 xref: ZFIN:ZDB-ANAT-100805-23 is_a: ZFA:0001596 ! joint relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-21T02:02:53Z [Term] id: ZFA:0005459 name: perilymphatic space namespace: zebrafish_anatomy def: "Space that contains perilymph." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-100805-24 is_a: ZFA:0001643 ! anatomical space relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-21T02:03:28Z [Term] id: ZFA:0005460 name: atrium of sinus impar namespace: zebrafish_anatomy def: "Bilaterally paired perilymphatic chambers posterior to the sinus impar. These connect to the anterior end of the otic duct." [ZFIN:ZDB-PUB-010912-7] xref: ZFIN:ZDB-ANAT-100805-25 is_a: ZFA:0005459 ! perilymphatic space relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-21T02:06:23Z [Term] id: ZFA:0005461 name: perilymphatic duct namespace: zebrafish_anatomy def: "Duct that contains perilymph." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-100805-26 is_a: ZFA:0005171 ! duct relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-21T02:15:02Z [Term] id: ZFA:0005462 name: otic duct namespace: zebrafish_anatomy def: "Pair of perilymphatic ducts that extend from the dorsal ends of the atria of the sinus impar, pass on either side of the medulla and merge and extend dorsally toward the surface of the head." [ZFIN:ZDB-PUB-010912-7] xref: ZFIN:ZDB-ANAT-100805-27 is_a: ZFA:0005461 ! perilymphatic duct relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-21T02:15:52Z [Term] id: ZFA:0005463 name: oral ectoderm namespace: zebrafish_anatomy def: "Ectoderm of the oral region." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-100805-28 is_a: ZFA:0000016 ! ectoderm relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0000590 ! oral region relationship: start ZFS:0000033 ! Hatching:Long-pec created_by: Ceri creation_date: 2010-07-21T03:22:11Z [Term] id: ZFA:0005464 name: dentary-anguloarticular joint namespace: zebrafish_anatomy def: "Joint that articulates the dentary and anguloarticular. Dentary-anguloarticular joint is paired." [TAO:curator] xref: TAO:0001749 xref: ZFIN:ZDB-ANAT-100805-29 is_a: ZFA:0001596 ! joint relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-21T03:56:09Z [Term] id: ZFA:0005465 name: ceratohyal-branchiostegal ray joint namespace: zebrafish_anatomy def: "Joint that articulates the ceratohyal and branchiostegal ray bones. Ceratohyal-branchiostegal ray joint is paired." [TAO:curator] xref: TAO:0001850 xref: ZFIN:ZDB-ANAT-100805-30 is_a: ZFA:0001596 ! joint relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-21T03:56:35Z [Term] id: ZFA:0005466 name: ceratohyal-ventral hypohyal joint namespace: zebrafish_anatomy def: "Joint that articulates the ceratohyal and ventral hypohyal bones. Ceratohyal-ventral hypohyal joint is paired." [TAO:curator] xref: TAO:0001844 xref: ZFIN:ZDB-ANAT-100805-31 is_a: ZFA:0001596 ! joint relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-21T03:56:50Z [Term] id: ZFA:0005467 name: ceratohyal-dorsal hypohyal joint namespace: zebrafish_anatomy def: "Joint that articulates the ceratohyal and dorsal hypohyal bones. Ceratohyal-dorsal hypohyal joint is paired." [TAO:curator] xref: TAO:0001843 xref: ZFIN:ZDB-ANAT-100805-32 is_a: ZFA:0001596 ! joint relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-21T03:57:08Z [Term] id: ZFA:0005468 name: frontal-pterotic joint namespace: zebrafish_anatomy def: "Joint that articulates the frontal and pterotic. Frontal-pterotic joint is paired." [TAO:curator] xref: TAO:0001711 xref: ZFIN:ZDB-ANAT-100805-33 is_a: ZFA:0001596 ! joint relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-21T03:57:53Z [Term] id: ZFA:0005469 name: hyomandibula-metapterygoid joint namespace: zebrafish_anatomy def: "Joint that articulates the hyomandibula bone and metapterygoid bone." [TAO:curator] xref: TAO:0001979 xref: ZFIN:ZDB-ANAT-100805-34 is_a: ZFA:0001596 ! joint relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-21T03:58:13Z [Term] id: ZFA:0005470 name: inter-coracoid joint namespace: zebrafish_anatomy def: "Joint between the right and left coracoid bones of the pectoral girdle." [TAO:curator] xref: TAO:0002040 xref: ZFIN:ZDB-ANAT-100805-35 is_a: ZFA:0001596 ! joint relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-21T03:58:45Z [Term] id: ZFA:0005471 name: inter-basipterygium joint namespace: zebrafish_anatomy def: "Joint that articulates the left and right basipterygium cartilage or bone. Inter-basipterygium joint is unpaired." [TAO:curator] xref: TAO:0001939 xref: ZFIN:ZDB-ANAT-100805-36 is_a: ZFA:0001596 ! joint relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-21T03:59:58Z [Term] id: ZFA:0005472 name: inter-frontal joint namespace: zebrafish_anatomy def: "Joint between the left and right frontal bone." [TAO:curator] xref: TAO:0001922 xref: ZFIN:ZDB-ANAT-100805-37 is_a: ZFA:0001596 ! joint relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-21T04:01:00Z [Term] id: ZFA:0005473 name: interhyal-epihyal joint namespace: zebrafish_anatomy def: "Joint that articulates the interhyal and epihyal bones, or interhyal and ceratohyal cartilages. Interhyal-epihyal joint is paired." [TAO:curator] xref: TAO:0001841 xref: ZFIN:ZDB-ANAT-100805-38 is_a: ZFA:0001596 ! joint relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-21T04:01:23Z [Term] id: ZFA:0005474 name: inter-hypobranchial 3 joint namespace: zebrafish_anatomy def: "Joint that articulates the left and right hypobranchial 3 cartilages or bones. Inter-hypobranchial 3 joint is unpaired." [TAO:curator] xref: TAO:0001863 xref: ZFIN:ZDB-ANAT-100805-39 is_a: ZFA:0001596 ! joint relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-21T04:01:35Z [Term] id: ZFA:0005475 name: inter-premaxillary joint namespace: zebrafish_anatomy def: "Joint that articulates the left and right premaxillary bones. Inter-premaxillary joint is unpaired." [TAO:curator] xref: TAO:0001950 xref: ZFIN:ZDB-ANAT-100805-40 is_a: ZFA:0001596 ! joint relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-21T04:01:59Z [Term] id: ZFA:0005476 name: inter-ventral hypohyal joint namespace: zebrafish_anatomy def: "Joint that articulates the contralateral ventral hypohyal bones or the contralateral ceratobranchial cartilages. Inter-ventral hypohyal joint is paired." [TAO:curator] xref: TAO:0001846 xref: ZFIN:ZDB-ANAT-100805-41 is_a: ZFA:0001596 ! joint relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-21T04:02:17Z [Term] id: ZFA:0005477 name: lateral ethmoid-frontal joint namespace: zebrafish_anatomy def: "Joint that articulates the lateral ethmoid and frontal. Lateral ethmoid-frontal joint is paired." [TAO:curator] xref: TAO:0002032 xref: ZFIN:ZDB-ANAT-100805-42 is_a: ZFA:0001596 ! joint relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-21T04:02:40Z [Term] id: ZFA:0005478 name: opercle-interopercle joint namespace: zebrafish_anatomy def: "Joint that articulates the opercle and interopercle. Opercle-interopercle joint is paired." [TAO:curator] xref: TAO:0001710 xref: ZFIN:ZDB-ANAT-100805-43 is_a: ZFA:0001596 ! joint relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-21T04:03:01Z [Term] id: ZFA:0005479 name: orbitosphenoid-lateral ethmoid joint namespace: zebrafish_anatomy def: "Joint that articulates the orbitosphenoid cartilage or bone and lateral ethmoid cartilage or bone. Orbitosphenoid-lateral ethmoid joint is paired." [TAO:curator] xref: TAO:0001941 xref: ZFIN:ZDB-ANAT-100805-44 is_a: ZFA:0001596 ! joint relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-21T04:03:17Z [Term] id: ZFA:0005480 name: orbitosphenoid-prootic joint namespace: zebrafish_anatomy def: "Joint that articulates orbitosphenoid and prootic bones. Orbitosphenoid-prootic joint is paired." [TAO:curator] xref: TAO:0001794 xref: ZFIN:ZDB-ANAT-100805-45 is_a: ZFA:0001596 ! joint relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-21T04:03:30Z [Term] id: ZFA:0005481 name: prootic-exoccipital joint namespace: zebrafish_anatomy def: "Joint that articulates the prootic and exoccipital. Prootic-exoccipital joint is paired." [TAO:curator] xref: TAO:0002034 xref: ZFIN:ZDB-ANAT-100805-46 is_a: ZFA:0001596 ! joint relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-21T04:41:27Z [Term] id: ZFA:0005482 name: prootic-pterosphenoid joint namespace: zebrafish_anatomy def: "Joint that articulates the prootic and pterosphenoid. Prootic-pterosphenoid joint is paired." [TAO:curator] xref: TAO:0002033 xref: ZFIN:ZDB-ANAT-100805-47 is_a: ZFA:0001596 ! joint relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-21T04:41:53Z [Term] id: ZFA:0005483 name: pterosphenoid-orbitosphenoid joint namespace: zebrafish_anatomy def: "Joint that articulates the pterosphenoid and orbitosphenoid. Pterosphenoid-orbitosphenoid joint is paired." [TAO:curator] xref: TAO:0001831 xref: ZFIN:ZDB-ANAT-100805-48 is_a: ZFA:0001596 ! joint relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-21T04:42:11Z [Term] id: ZFA:0005484 name: quadrate-anguloarticular joint namespace: zebrafish_anatomy def: "Joint that articulates quadrate and anguloarticular bones. Quadrate-articular joint is paired." [TAO:curator] xref: TAO:0001802 xref: ZFIN:ZDB-ANAT-100805-49 is_a: ZFA:0005153 ! synovial joint relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-21T04:44:59Z [Term] id: ZFA:0005485 name: quadrate-hyomandibula joint namespace: zebrafish_anatomy def: "Joint that articulates quadrate and hyomandibula bones. Quadrate-hyomandibula joint is paired." [TAO:curator] xref: TAO:0001801 xref: ZFIN:ZDB-ANAT-100805-50 is_a: ZFA:0001596 ! joint relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-21T04:45:14Z [Term] id: ZFA:0005486 name: quadrate-metapterygoid joint namespace: zebrafish_anatomy def: "Joint that articulates quadrate and metapterygoid bones. Quadrate-metapterygoid joint is paired." [TAO:curator] xref: TAO:0001803 xref: ZFIN:ZDB-ANAT-100805-51 is_a: ZFA:0001596 ! joint relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-21T04:45:27Z [Term] id: ZFA:0005487 name: ventral hypohyal-urohyal joint namespace: zebrafish_anatomy def: "Joint that articulates the ventral hypohyal and urohyal bones. Ventral hypohyal-urohyal joint is paired." [TAO:curator] xref: TAO:0001848 xref: ZFIN:ZDB-ANAT-100805-52 is_a: ZFA:0001596 ! joint relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-21T04:46:00Z [Term] id: ZFA:0005488 name: mandibular symphysis namespace: zebrafish_anatomy def: "Joint that articulates the left and right dentary bones. Mandibular symphysis is unpaired." [TAO:curator] xref: TAO:0001851 xref: ZFIN:ZDB-ANAT-100805-53 is_a: ZFA:0005155 ! cartilaginous joint relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-21T04:55:35Z [Term] id: ZFA:0005489 name: endocardial precursor namespace: zebrafish_anatomy def: "Is a portion of tissue part of the heart primordium which will give rise to the endocardium." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-100805-54 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000027 ! Segmentation:20-25 somites relationship: part_of ZFA:0000028 ! heart primordium relationship: start ZFS:0000024 ! Segmentation:5-9 somites created_by: Ceri creation_date: 2010-07-21T02:50:10Z [Term] id: ZFA:0005490 name: myocardial precursor namespace: zebrafish_anatomy def: "Portion of tissue that will develop into the myocardium." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-100805-55 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000027 ! Segmentation:20-25 somites relationship: part_of ZFA:0000028 ! heart primordium relationship: start ZFS:0000024 ! Segmentation:5-9 somites created_by: Ceri creation_date: 2010-07-21T02:53:48Z [Term] id: ZFA:0005491 name: optic furrow namespace: zebrafish_anatomy def: "Groove that is in the ventral optic cup remnant of the optic fissure." [ZFIN:ZDB-PUB-090819-12] synonym: "optic fissure" RELATED [] xref: ZFIN:ZDB-ANAT-100805-56 is_a: ZFA:0001690 ! groove relationship: develops_from ZFA:0001284 ! optic fissure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000107 ! eye relationship: start ZFS:0000030 ! Pharyngula:Prim-15 created_by: Ceri creation_date: 2010-07-21T03:00:49Z [Term] id: ZFA:0005492 name: pro-otic fossa namespace: zebrafish_anatomy xref: TAO:0002090 xref: ZFIN:ZDB-ANAT-100805-57 is_a: ZFA:0005388 ! fossa relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-22T11:19:01Z [Term] id: ZFA:0005493 name: recessus lateralis namespace: zebrafish_anatomy def: "Intracranial space formed by confluence of supraorbital, infraorbital, preopercular and temporal sensory canals. See also Di Dario (2004)." [TAO:curator] xref: TAO:0001799 xref: ZFIN:ZDB-ANAT-100805-58 is_a: ZFA:0001643 ! anatomical space relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-22T11:19:30Z [Term] id: ZFA:0005494 name: skeletal element namespace: zebrafish_anatomy xref: TAO:0001890 xref: ZFIN:ZDB-ANAT-100805-59 is_a: ZFA:0001632 ! portion of connective tissue relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-22T11:20:29Z [Term] id: ZFA:0005495 name: skin flap namespace: zebrafish_anatomy def: "Surface structure that is a portion of skin that projects or hangs from the body." [TAO:curator] xref: TAO:0001951 xref: ZFIN:ZDB-ANAT-100805-60 is_a: ZFA:0000368 ! integument relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-22T11:21:23Z [Term] id: ZFA:0005496 name: snout namespace: zebrafish_anatomy def: "Surface structure that is the region of the head in front of and between the orbits, and above the lower jaw. Nares are located on the snout." [TAO:curator] xref: TAO:0001712 xref: ZFIN:ZDB-ANAT-100805-61 is_a: ZFA:0001308 ! organism subdivision relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-22T11:22:07Z [Term] id: ZFA:0005497 name: epihyal-ceratohyal joint namespace: zebrafish_anatomy def: "Joint that articulates the epihyal and ceratohyal bones. Epihyal-ceratohyal joint is paired." [TAO:curator] xref: TAO:0001842 xref: ZFIN:ZDB-ANAT-100805-62 is_a: ZFA:0001596 ! joint relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-22T12:32:09Z [Term] id: ZFA:0005498 name: epihyal-branchiostegal ray joint namespace: zebrafish_anatomy def: "Joint that articulates the epihyal and branchiostegal ray bones. Epihyal-branchiostegal ray joint is paired." [TAO:curator] xref: TAO:0001849 xref: ZFIN:ZDB-ANAT-100805-63 is_a: ZFA:0001596 ! joint relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-22T12:32:23Z [Term] id: ZFA:0005499 name: circuli namespace: zebrafish_anatomy def: "Fine ridges on surface of scale, often parallel to the circumference of scale." [TAO:curator] xref: TAO:0002051 xref: ZFIN:ZDB-ANAT-100805-64 is_a: ZFA:0001689 ! anatomical line relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000277 ! scale relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-22T12:33:11Z [Term] id: ZFA:0005500 name: prootic bulla namespace: zebrafish_anatomy def: "Is a bony partially gas filled sphere located ventral and anterior to the inner ear. The prootic bulla is paired." [ZFIN:Curator] xref: TAO:0002111 xref: ZFIN:ZDB-ANAT-100805-65 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-22T02:22:46Z [Term] id: ZFA:0005501 name: interopercular-mandibular ligament namespace: zebrafish_anatomy def: "Interopercular-mandibular ligament is a ligament that connects the interopercle to an element of the lower jaw, typically the retroarticular." [TAO:curator] xref: TAO:0001687 xref: ZFIN:ZDB-ANAT-100805-66 is_a: ZFA:0001675 ! ligament relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-22T12:38:04Z [Term] id: ZFA:0005502 name: lateral ethmoid-autopalatine ligament namespace: zebrafish_anatomy def: "Lateral ethmoid-autopalatine ligament is a ligament that connects the lateral ethmoid to the autopalatine." [TAO:curator] xref: TAO:0001944 xref: ZFIN:ZDB-ANAT-100805-67 is_a: ZFA:0001675 ! ligament relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-22T12:38:20Z [Term] id: ZFA:0005503 name: lateral ethmoid-ectopterygoid ligament namespace: zebrafish_anatomy def: "Lateral ethmoid-ectopterygoid ligament is a ligament that connects the lateral ethmoid to the ectopterygoid." [TAO:curator] xref: TAO:0001685 xref: ZFIN:ZDB-ANAT-100805-68 is_a: ZFA:0001675 ! ligament relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-22T12:38:32Z [Term] id: ZFA:0005504 name: vertebra 4-vertebra 5 joint namespace: zebrafish_anatomy def: "Joint between the centra, and sometimes the neural arches or parapophyses of vertebra 4 and vertebra 5." [TAO:curator] xref: TAO:0001940 xref: ZFIN:ZDB-ANAT-100805-69 is_a: ZFA:0005155 ! cartilaginous joint relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-22T01:33:36Z [Term] id: ZFA:0005505 name: vertebra 5-vertebra 6 joint namespace: zebrafish_anatomy def: "Joint between the centra, and sometimes the neural arches or parapophyses." [TAO:curator] xref: TAO:0002054 xref: ZFIN:ZDB-ANAT-100805-70 is_a: ZFA:0005155 ! cartilaginous joint relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-22T01:33:50Z [Term] id: ZFA:0005506 name: vertebra 6 - vertebra 7 joint namespace: zebrafish_anatomy def: "Joint between the centra, and sometimes the neural arches or parapophyses of vertebra 6 and vertebra 7." [TAO:curator] xref: TAO:0002055 xref: ZFIN:ZDB-ANAT-100805-71 is_a: ZFA:0005155 ! cartilaginous joint relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-22T01:34:02Z [Term] id: ZFA:0005507 name: nasal capsule namespace: zebrafish_anatomy def: "Multi-tissue structure composed of connective tissue that surrounds, the internal portions of the olfactory epithelium." [ZFIN:curator] xref: TAO:0002035 xref: ZFIN:ZDB-ANAT-100805-72 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-23T11:47:54Z [Term] id: ZFA:0005508 name: inner mental barbel namespace: zebrafish_anatomy def: "Mental barbel that originates on the chin, in an anteromedial position relative to the outer mental barbel. The inner mental barbel is nearer to the mandibular symphysis than is the outer mental barbel." [TAO:curator] xref: TAO:0001969 xref: ZFIN:ZDB-ANAT-100805-73 is_a: ZFA:0000622 ! barbel relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-23T12:08:04Z [Term] id: ZFA:0005509 name: palate namespace: zebrafish_anatomy def: "Anatomical cluster that is the upper roof of the mouth that is roofed by bones such as the parasphenoid, vomer, metapterygoid, orbitosphenoid." [TAO:curator] xref: TAO:0002093 xref: ZFIN:ZDB-ANAT-100805-74 is_a: ZFA:0001478 ! anatomical cluster relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-23T12:10:28Z [Term] id: ZFA:0005510 name: prootic depression namespace: zebrafish_anatomy def: "Shallow area that exists on the prootic." [TAO:curator] xref: TAO:0002052 xref: ZFIN:ZDB-ANAT-100805-75 is_a: ZFA:0005388 ! fossa relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-23T12:30:37Z [Term] id: ZFA:0005511 name: sensory canal tubular ossicle namespace: zebrafish_anatomy def: "Dermal bone that is ring-shaped or cylindrical and surrounds a sensory canal." [TAO:curator] xref: TAO:0001932 xref: ZFIN:ZDB-ANAT-100805-76 is_a: ZFA:0001590 ! dermal bone relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-23T12:32:05Z [Term] id: ZFA:0005512 name: caudal fin principal ray 1 namespace: zebrafish_anatomy def: "Caudal principal ray that is the dorsalmost caudal principal ray of the caudal fin." [TAO:curator] synonym: "caudal principal lepidotrichium 1 " EXACT [] synonym: "caudal principal ray 1 " EXACT [] xref: TAO:0001713 xref: ZFIN:ZDB-ANAT-100805-77 is_a: ZFA:0001585 ! caudal fin principal ray relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-23T12:45:32Z [Term] id: ZFA:0005513 name: caudal principal ray 3 namespace: zebrafish_anatomy def: "Caudal principal ray that is ventrally adjacent to caudal principal ray 2." [TAO:curator] synonym: "caudal principal lepidotrichium 3 " EXACT [] synonym: "caudal principal ray 3" EXACT [] xref: TAO:0001715 xref: ZFIN:ZDB-ANAT-100805-78 is_a: ZFA:0001585 ! caudal fin principal ray relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-23T01:01:02Z [Term] id: ZFA:0005514 name: caudal principal ray 2 namespace: zebrafish_anatomy def: "Caudal principal ray that is ventrally adjacent to caudal principal ray 1." [TAO:curator] synonym: "caudal principal lepidotrichium 2 " EXACT [] synonym: "caudal principal ray 2" EXACT [] xref: TAO:0001714 xref: ZFIN:ZDB-ANAT-100805-79 is_a: ZFA:0001585 ! caudal fin principal ray relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-23T12:57:40Z [Term] id: ZFA:0005515 name: caudal principal ray 4 namespace: zebrafish_anatomy def: "Caudal principal ray that is ventrally adjacent to caudal principal ray 3." [TAO:curator] synonym: "caudal principal lepidotrichium 4 " EXACT [] synonym: "caudal principal ray 4" EXACT [] xref: TAO:0001716 xref: ZFIN:ZDB-ANAT-100805-80 is_a: ZFA:0001585 ! caudal fin principal ray relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-23T01:01:37Z [Term] id: ZFA:0005516 name: caudal principal ray 5 namespace: zebrafish_anatomy def: "Caudal principal ray that is ventrally adjacent to caudal principal ray 4." [TAO:curator] synonym: "caudal principal lepidotrichium 5" EXACT [] synonym: "caudal principal ray 5" EXACT [] xref: TAO:0001717 xref: ZFIN:ZDB-ANAT-100805-81 is_a: ZFA:0001585 ! caudal fin principal ray relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-23T01:02:04Z [Term] id: ZFA:0005517 name: caudal principal ray 6 namespace: zebrafish_anatomy def: "Caudal principal ray that is ventrally adjacent to caudal principal ray 5." [TAO:curator] synonym: "caudal principal lepidotrichium 6" EXACT [] synonym: "caudal principal ray 6" EXACT [] xref: TAO:0001718 xref: ZFIN:ZDB-ANAT-100805-82 is_a: ZFA:0001585 ! caudal fin principal ray relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-23T01:02:36Z [Term] id: ZFA:0005518 name: caudal principal ray 7 namespace: zebrafish_anatomy def: "Caudal principal ray that is ventrally adjacent to caudal principal ray 6." [TAO:curator] synonym: "caudal principal lepidotrichium 7" EXACT [] synonym: "caudal principal ray 7" EXACT [] xref: TAO:0001719 xref: ZFIN:ZDB-ANAT-100805-83 is_a: ZFA:0001585 ! caudal fin principal ray relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-23T01:02:36Z [Term] id: ZFA:0005519 name: caudal principal ray 8 namespace: zebrafish_anatomy def: "Caudal principal ray that is ventrally adjacent to caudal principal ray 7." [TAO:curator] synonym: "caudal principal lepidotrichium 8" EXACT [] synonym: "caudal principal ray 8" EXACT [] xref: TAO:0001720 xref: ZFIN:ZDB-ANAT-100805-84 is_a: ZFA:0001585 ! caudal fin principal ray relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-23T01:02:36Z [Term] id: ZFA:0005520 name: caudal principal ray 9 namespace: zebrafish_anatomy def: "Caudal principal ray that is ventrally adjacent to caudal principal ray 8." [TAO:curator] synonym: "caudal principal lepidotrichium 9" EXACT [] synonym: "caudal principal ray 9" EXACT [] xref: TAO:0001721 xref: ZFIN:ZDB-ANAT-100805-85 is_a: ZFA:0001585 ! caudal fin principal ray relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-23T01:02:36Z [Term] id: ZFA:0005521 name: caudal principal ray 10 namespace: zebrafish_anatomy def: "Caudal principal ray that is ventrally adjacent to caudal principal ray 9." [TAO:curator] synonym: "caudal principal lepidotrichium 10" EXACT [] synonym: "caudal principal ray 10" EXACT [] xref: TAO:0001722 xref: ZFIN:ZDB-ANAT-100805-86 is_a: ZFA:0001585 ! caudal fin principal ray relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-23T01:02:36Z [Term] id: ZFA:0005522 name: caudal principal ray 11 namespace: zebrafish_anatomy def: "Caudal principal ray that is ventrally adjacent to caudal principal ray 10." [TAO:curator] synonym: "caudal principal lepidotrichium 11" EXACT [] synonym: "caudal principal ray 11" EXACT [] xref: TAO:0001723 xref: ZFIN:ZDB-ANAT-100805-87 is_a: ZFA:0001585 ! caudal fin principal ray relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-23T01:02:36Z [Term] id: ZFA:0005523 name: caudal principal ray 12 namespace: zebrafish_anatomy def: "Caudal principal ray that is ventrally adjacent to caudal principal ray 11." [TAO:curator] synonym: "caudal principal lepidotrichium 12" EXACT [] synonym: "caudal principal ray 12" EXACT [] xref: TAO:0001724 xref: ZFIN:ZDB-ANAT-100805-88 is_a: ZFA:0001585 ! caudal fin principal ray relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-23T01:02:36Z [Term] id: ZFA:0005524 name: caudal principal ray 14 namespace: zebrafish_anatomy def: "Caudal principal ray that is ventrally adjacent to caudal principal ray 13." [TAO:curator] synonym: "caudal principal lepidotrichium 13" EXACT [] synonym: "caudal principal lepidotrichium 14" EXACT [] synonym: "caudal principal ray 13" EXACT [] synonym: "caudal principal ray 14" EXACT [] xref: TAO:0001725 xref: TAO:0001726 xref: ZFIN:ZDB-ANAT-100805-89 is_a: ZFA:0001585 ! caudal fin principal ray relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-23T01:02:36Z [Term] id: ZFA:0005525 name: caudal principal ray 15 namespace: zebrafish_anatomy def: "Caudal principal ray that is ventrally adjacent to caudal principal ray 14." [TAO:curator] synonym: "caudal principal lepidotrichium 15" EXACT [] synonym: "caudal principal ray 15" EXACT [] xref: TAO:0001727 xref: ZFIN:ZDB-ANAT-100805-90 is_a: ZFA:0001585 ! caudal fin principal ray relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-23T01:02:36Z [Term] id: ZFA:0005526 name: caudal principal ray 16 namespace: zebrafish_anatomy def: "Caudal principal ray that is ventrally adjacent to caudal principal ray 15." [TAO:curator] synonym: "caudal principal lepidotrichium 16" EXACT [] synonym: "caudal principal ray 16" EXACT [] xref: TAO:0001728 xref: ZFIN:ZDB-ANAT-100805-91 is_a: ZFA:0001585 ! caudal fin principal ray relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-23T01:02:36Z [Term] id: ZFA:0005527 name: caudal principal ray 17 namespace: zebrafish_anatomy def: "Caudal principal ray that is ventrally adjacent to caudal principal ray 16." [TAO:curator] synonym: "caudal principal lepidotrichium 17" EXACT [] synonym: "caudal principal ray 17" EXACT [] xref: TAO:0001729 xref: ZFIN:ZDB-ANAT-100805-92 is_a: ZFA:0001585 ! caudal fin principal ray relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-23T01:02:36Z [Term] id: ZFA:0005528 name: caudal principal ray 18 namespace: zebrafish_anatomy def: "Caudal principal ray that is ventrally adjacent to caudal principal ray 17." [TAO:curator] synonym: "caudal principal lepidotrichium 18" EXACT [] synonym: "caudal principal ray 18" EXACT [] xref: TAO:0001730 xref: ZFIN:ZDB-ANAT-100805-93 is_a: ZFA:0001585 ! caudal fin principal ray relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-23T01:02:36Z [Term] id: ZFA:0005529 name: caudal principal ray 19 namespace: zebrafish_anatomy def: "Caudal principal ray that is ventrally adjacent to caudal principal ray 18." [TAO:curator] synonym: "caudal principal lepidotrichium 19" EXACT [] synonym: "caudal principal ray 19" EXACT [] xref: TAO:0001731 xref: ZFIN:ZDB-ANAT-100805-94 is_a: ZFA:0001585 ! caudal fin principal ray relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-23T01:02:36Z [Term] id: ZFA:0005530 name: lateral line scale namespace: zebrafish_anatomy def: "Scale that is associated with the lateral line sensory canal." [TAO:curator] xref: TAO:0001824 xref: ZFIN:ZDB-ANAT-100805-95 is_a: ZFA:0000277 ! scale relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-23T01:49:27Z [Term] id: ZFA:0005531 name: bony shelf above orbit namespace: zebrafish_anatomy def: "The bony shelf above orbit is an anatomical cluster formed by the dorsolateral portions of the lateral ethmoid, frontal and sphenotic bones that forms the dorsal margin of the orbit." [TAO:curator] xref: TAO:0001686 xref: ZFIN:ZDB-ANAT-100805-96 is_a: ZFA:0001478 ! anatomical cluster relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-23T01:52:58Z [Term] id: ZFA:0005532 name: bony plate namespace: zebrafish_anatomy def: "Dermal bone that is located on or subjacent to the surface anywhere on the body and that is not part of the general complement of scales, dermal bone of the dermatocranium, postcranial axial skeleton or paired fin skeleton. Bony plate may exist singly, or as unpaired or paired clusters or series." [TAO:curator] xref: TAO:0002053 xref: ZFIN:ZDB-ANAT-100805-97 is_a: ZFA:0001590 ! dermal bone relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-23T01:53:33Z [Term] id: ZFA:0005533 name: branched caudal fin ray namespace: zebrafish_anatomy def: "Caudal fin lepidotrichium that is distally branched." [TAO:curator] xref: TAO:0002062 xref: ZFIN:ZDB-ANAT-100805-98 is_a: ZFA:0001550 ! caudal fin lepidotrichium relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-23T01:55:31Z [Term] id: ZFA:0005534 name: branched dorsal fin ray namespace: zebrafish_anatomy xref: TAO:0001785 xref: ZFIN:ZDB-ANAT-100805-99 is_a: ZFA:0001418 ! dorsal fin lepidotrichium relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-23T01:55:54Z [Term] id: ZFA:0005535 name: branched anal fin ray namespace: zebrafish_anatomy xref: TAO:0001992 xref: ZFIN:ZDB-ANAT-100805-100 is_a: ZFA:0001421 ! anal fin lepidotrichium relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-23T01:56:47Z [Term] id: ZFA:0005536 name: fontanel namespace: zebrafish_anatomy def: "Anatomical space between bones of the neurocranium. Frequently closes during development." [ZFIN:curator] xref: TAO:0001738 xref: ZFIN:ZDB-ANAT-100805-101 is_a: ZFA:0001643 ! anatomical space relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001580 ! neurocranium relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-29T06:27:16Z [Term] id: ZFA:0005537 name: lateral fontanel of frontal namespace: zebrafish_anatomy def: "Fontanel within the frontal bone near the frontal-sphenotic joint. Lateral fontanel of frontal is paired." [TAO:curator] xref: TAO:0002011 xref: ZFIN:ZDB-ANAT-100805-102 is_a: ZFA:0005536 ! fontanel relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-29T06:28:46Z [Term] id: ZFA:0005538 name: rib of vertebra 1 namespace: zebrafish_anatomy def: "Rib that articulates with the parapophysis of the first centrum." [TAO:curator] xref: TAO:0001879 xref: ZFIN:ZDB-ANAT-100805-103 is_a: ZFA:0000538 ! rib relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-29T06:29:54Z [Term] id: ZFA:0005539 name: rib of vertebra 2 namespace: zebrafish_anatomy def: "Rib that articulates with the parapophysis of the second centrum." [TAO:curator] xref: TAO:0001878 xref: ZFIN:ZDB-ANAT-100805-104 is_a: ZFA:0000538 ! rib relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-29T06:30:06Z [Term] id: ZFA:0005540 name: rib of vertebra 3 namespace: zebrafish_anatomy def: "Rib that articulates with the parapophysis of the third centrum." [TAO:curator] xref: TAO:0001880 xref: ZFIN:ZDB-ANAT-100805-105 is_a: ZFA:0000538 ! rib relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-29T06:30:18Z [Term] id: ZFA:0005541 name: rib of vertebra 4 namespace: zebrafish_anatomy def: "Rib that articulates with the parapophysis of the fourth centrum." [TAO:curator] xref: TAO:0001881 xref: ZFIN:ZDB-ANAT-100805-106 is_a: ZFA:0000538 ! rib relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-29T06:30:34Z [Term] id: ZFA:0005542 name: rib of vertebra 5 namespace: zebrafish_anatomy def: "Rib that articulates with the parapophysis of the fifth centrum." [TAO:curator] xref: TAO:0001751 xref: ZFIN:ZDB-ANAT-100805-107 is_a: ZFA:0000538 ! rib relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-29T06:30:51Z [Term] id: ZFA:0005543 name: rib of vertebra 6 namespace: zebrafish_anatomy def: "Rib that articulates with the parapophysis of the sixth centrum." [TAO:curator] xref: TAO:0001750 xref: ZFIN:ZDB-ANAT-100805-108 is_a: ZFA:0000538 ! rib relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-29T06:31:02Z [Term] id: ZFA:0005544 name: hyomandibular-otic region joint namespace: zebrafish_anatomy xref: TAO:0001947 xref: ZFIN:ZDB-ANAT-100805-109 is_a: ZFA:0001596 ! joint relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-30T10:38:51Z [Term] id: ZFA:0005545 name: pectoral fin actinotrichium namespace: zebrafish_anatomy def: "Actinotrichium that is part of the pectoral fin." [TAO:curator] xref: TAO:0000544 xref: ZFIN:ZDB-ANAT-100805-110 is_a: ZFA:0005435 ! actinotrichium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001161 ! pectoral fin relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-30T10:50:19Z [Term] id: ZFA:0005546 name: pelvic fin actinotrichium namespace: zebrafish_anatomy def: "Actinotrichium that is part of the pelvic fin." [TAO:curator] xref: TAO:0000596 xref: ZFIN:ZDB-ANAT-100805-111 is_a: ZFA:0005435 ! actinotrichium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001184 ! pelvic fin relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-30T10:50:46Z [Term] id: ZFA:0005547 name: pectoral fin lepidotrichium 1 namespace: zebrafish_anatomy def: "Pectoral fin lepidotrichium 1 is the leading or marginal ray of the fin and articulates with the scapula. Lepidotrichium 1 is commonly segmented but unbranched." [TAO:curator] xref: TAO:0001761 xref: ZFIN:ZDB-ANAT-100805-112 is_a: ZFA:0001551 ! pectoral fin lepidotrichium relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-30T10:55:24Z [Term] id: ZFA:0005548 name: pectoral fin lepidotrichium 2 namespace: zebrafish_anatomy def: "Pectoral fin lepidotrichium that, in a linear sequence, is the second most anterior pectoral ray, usually branched and segmented." [TAO:curator] xref: TAO:0001762 xref: ZFIN:ZDB-ANAT-100805-113 is_a: ZFA:0001551 ! pectoral fin lepidotrichium relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-30T10:58:18Z [Term] id: ZFA:0005549 name: pectoral fin lepidotrichium 3 namespace: zebrafish_anatomy def: "Pectoral fin lepidotrichium that, in a linear sequence, is the third most anterior pectoral ray, usually branched and segmented." [TAO:curator] xref: TAO:0001763 xref: ZFIN:ZDB-ANAT-100805-114 is_a: ZFA:0001551 ! pectoral fin lepidotrichium relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-30T10:58:24Z [Term] id: ZFA:0005550 name: pectoral fin lepidotrichium 6 namespace: zebrafish_anatomy def: "Pectoral fin lepidotrichium that, in a linear sequence, is the sixth most anterior pectoral ray, usually branched and segmented." [TAO:curator] xref: TAO:0001766 xref: ZFIN:ZDB-ANAT-100805-115 is_a: ZFA:0001551 ! pectoral fin lepidotrichium relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-30T10:59:08Z [Term] id: ZFA:0005551 name: pectoral fin lepidotrichium 7 namespace: zebrafish_anatomy def: "Pectoral fin lepidotrichium that, in a linear sequence, is the seventh most anterior pectoral ray, usually branched and segmented." [TAO:curator] xref: TAO:0001767 xref: ZFIN:ZDB-ANAT-100805-116 is_a: ZFA:0001551 ! pectoral fin lepidotrichium relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-30T10:59:13Z [Term] id: ZFA:0005552 name: pectoral fin lepidotrichium 5 namespace: zebrafish_anatomy def: "Pectoral fin lepidotrichium that, in a linear sequence, is the fifth most anterior pectoral ray , usually branched and segmented." [TAO:curator] xref: TAO:0001765 xref: ZFIN:ZDB-ANAT-100805-117 is_a: ZFA:0001551 ! pectoral fin lepidotrichium relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-30T10:59:20Z [Term] id: ZFA:0005553 name: pectoral fin lepidotrichium 4 namespace: zebrafish_anatomy def: "Pectoral fin lepidotrichium that, in a linear sequence, is the fourth most anterior pectoral ray, usually branched and segmented." [TAO:curator] xref: TAO:0001764 xref: ZFIN:ZDB-ANAT-100805-118 is_a: ZFA:0001551 ! pectoral fin lepidotrichium relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-30T10:59:26Z [Term] id: ZFA:0005554 name: pelvic fin lepidotrichium 1 namespace: zebrafish_anatomy xref: TAO:0001776 xref: ZFIN:ZDB-ANAT-100805-119 is_a: ZFA:0001552 ! pelvic fin lepidotrichium relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-30T11:13:56Z [Term] id: ZFA:0005555 name: pelvic fin lepidotrichium 2 namespace: zebrafish_anatomy xref: TAO:0001777 xref: ZFIN:ZDB-ANAT-100805-120 is_a: ZFA:0001552 ! pelvic fin lepidotrichium relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-30T11:15:37Z [Term] id: ZFA:0005556 name: pelvic fin lepidotrichium 4 namespace: zebrafish_anatomy xref: TAO:0001779 xref: ZFIN:ZDB-ANAT-100805-121 is_a: ZFA:0001552 ! pelvic fin lepidotrichium relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-30T11:15:48Z [Term] id: ZFA:0005557 name: pelvic fin lepidotrichium 3 namespace: zebrafish_anatomy xref: TAO:0001778 xref: ZFIN:ZDB-ANAT-100805-122 is_a: ZFA:0001552 ! pelvic fin lepidotrichium relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-30T11:15:48Z [Term] id: ZFA:0005558 name: orbit namespace: zebrafish_anatomy def: "Anatomical space that is the concavity containing the eye." [TAO:curator] xref: TAO:0001967 xref: ZFIN:ZDB-ANAT-100805-123 is_a: ZFA:0001643 ! anatomical space relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-07-30T11:17:20Z [Term] id: ZFA:0005559 name: vascular sprouts namespace: zebrafish_anatomy def: "Portion of vessel wall that extends to form a new vessel." [ZFIN:curator] synonym: "angiogenic sprout" RELATED [] xref: ZFIN:ZDB-ANAT-101006-1 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0005249 ! vasculature relationship: start ZFS:0000028 ! Segmentation:26+ somites created_by: Ceri creation_date: 2010-09-23T05:54:14Z [Term] id: ZFA:0005560 name: parasphenoid-basioccipital joint namespace: zebrafish_anatomy def: "Joint that articulates the parasphenoid and basioccipital. Parasphenoid-basioccipital joint is paired." [TAO:curator] xref: TAO:0001832 xref: ZFIN:ZDB-ANAT-101006-2 is_a: ZFA:0001596 ! joint relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-09-24T11:52:49Z [Term] id: ZFA:0005561 name: vitreous namespace: zebrafish_anatomy def: "Portion of organism substance that is a gelatinous extracellular matrix structure that fills the vitreous cavity of the eye." [PMID:18344966] synonym: "vitreous body" EXACT [] xref: ZFIN:ZDB-ANAT-110121-1 is_a: ZFA:0001487 ! portion of organism substance relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-11-10T01:16:52Z [Term] id: ZFA:0005562 name: Bruch's membrane namespace: zebrafish_anatomy def: "Acellular anatomical structure that is the innermost layer of the optic choroid." [ZFIN:ZDB-PUB-070614-11] synonym: "vitreous lamina" EXACT [] xref: ZFIN:ZDB-ANAT-110121-2 is_a: ZFA:0000382 ! acellular anatomical structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005229 ! optic choroid relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-11-10T02:16:43Z [Term] id: ZFA:0005563 name: sclera namespace: zebrafish_anatomy def: "Multi-tissue structure that composes the opaque fibrous outer layer of the eye." [ZFIN:ZDB-PUB-050701-15] xref: ZFIN:ZDB-ANAT-110121-3 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000034 ! Hatching:Pec-fin created_by: Ceri creation_date: 2010-11-11T10:53:23Z [Term] id: ZFA:0005564 name: aqueous humor namespace: zebrafish_anatomy def: "Clear ocular fluid in the anterior segment of the eye. It is produced primarily by dorsal ciliary epithelial cells." [ZFIN:ZDB-PUB-050701-15] xref: ZFIN:ZDB-ANAT-110121-4 is_a: ZFA:0001487 ! portion of organism substance relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-11-11T11:10:25Z [Term] id: ZFA:0005565 name: tether cell namespace: zebrafish_anatomy def: "A specialized hair cell that has an elongated kinocilium upon which an otolith accretes. The tether cell then anchors the otolith in place.\"" [ZFIN:ZDB-PUB-971216-3] xref: CL:0002374 xref: ZFIN:ZDB-ANAT-110121-5 is_a: ZFA:0009366 ! hair cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-11-11T01:59:44Z [Term] id: ZFA:0005566 name: anterior segment eye namespace: zebrafish_anatomy def: "Anatomical cluster comprising the rostral portion of the eye; the cornea, lens, iris, ciliary zone, anterior chamber, and annular ligament." [ZFIN:ZDB-PUB-050701-15] xref: ZFIN:ZDB-ANAT-110121-6 is_a: ZFA:0001478 ! anatomical cluster relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-11-11T05:44:57Z [Term] id: ZFA:0005567 name: posterior segment eye namespace: zebrafish_anatomy def: "Anatomical cluster comprising the caudal portion of the eye: the retina, posterior chamber, optic choroid, and vitreous." [ZFIN:ZDB-PUB-050701-15] xref: ZFIN:ZDB-ANAT-110121-7 is_a: ZFA:0001478 ! anatomical cluster relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-11-12T11:52:42Z [Term] id: ZFA:0005568 name: iris blood vessels namespace: zebrafish_anatomy def: "Blood vessels within the stroma of the iris. The vessels cluster and are more dense at the base of the stroma where the iris is thicker." [ZFIN:ZDB-PUB-050701-15] xref: ZFIN:ZDB-ANAT-110121-8 is_a: ZFA:0001079 ! blood vasculature relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001238 ! iris relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-12-01T02:00:15Z [Term] id: ZFA:0005569 name: iris stroma namespace: zebrafish_anatomy def: "Portion of the iris which contains bundles of fibers, most of which are oriented radially around the pupil. The stroma is innervated by the iris blood vessels and develops from the periocular mesenchyme." [ZFIN:ZDB-PUB-050701-15] xref: ZFIN:ZDB-ANAT-110121-9 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001238 ! iris relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-12-01T02:28:06Z [Term] id: ZFA:0005570 name: corneo-scleral junction namespace: zebrafish_anatomy def: "The line where the cornea and the sclera meet." [ZFIN:ZDB-PUB-090309-8] xref: ZFIN:ZDB-ANAT-110121-10 is_a: ZFA:0001689 ! anatomical line relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-11-12T03:45:32Z [Term] id: ZFA:0005571 name: ventral canal eye namespace: zebrafish_anatomy def: "Duct present in the angle where the cornea meets the ciliary zone that absorbs the aqueous humor." [ZFIN:ZDB-PUB-050701-15] xref: ZFIN:ZDB-ANAT-110121-11 is_a: ZFA:0005171 ! duct relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000035 ! Larval:Protruding-mouth created_by: Ceri creation_date: 2010-11-12T03:51:50Z [Term] id: ZFA:0005572 name: periocular mesenchyme namespace: zebrafish_anatomy def: "Head mesenchyme surrounding the immature eye that gives rise to specialized structures of the anterior segment of the eye" [ZFIN:ZDB-PUB-050701-15] xref: ZFIN:ZDB-ANAT-110121-12 is_a: ZFA:0000113 ! head mesenchyme relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000029 ! Pharyngula:Prim-5 created_by: Ceri creation_date: 2010-12-02T12:29:18Z [Term] id: ZFA:0005573 name: zonule namespace: zebrafish_anatomy def: "Modified or toughened vitreous that suspend the lens at the equator to the non-pigmented epithelium of the ciliary zone. In zebrafish, dorsal zonules are thickened as compared to ventral zonules. In both dorsal and ventral regions, these fibers delimit the vitreous body aqueous humor boundary." [ZFIN:ZDB-PUB-050701-15] synonym: "zonules" EXACT PLURAL [] xref: ZFIN:ZDB-ANAT-110121-13 is_a: ZFA:0001487 ! portion of organism substance relationship: develops_from ZFA:0005561 ! vitreous relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Ceri creation_date: 2010-12-02T06:08:45Z [Term] id: ZFA:0005574 name: lens capsule namespace: zebrafish_anatomy def: "The lens capsule is a modified basement membrane that completely surrounds the ocular lens." [PMID:18773892] xref: ZFIN:ZDB-ANAT-110121-14 is_a: ZFA:0000382 ! acellular anatomical structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000035 ! lens relationship: start ZFS:0000035 ! Larval:Protruding-mouth created_by: Ceri creation_date: 2010-12-03T11:36:36Z [Term] id: ZFA:0006000 name: intermediate hypothalamus namespace: zebrafish_anatomy def: "Brain structure that lies perpendicular to the longitudinal axis of the embryonic neural tube, is continuous with the rostral hypothalamic proliferation and whose most lateral extent is deflected dorsally within the inferior lobe." [ZFIN:ZDB-PUB-001018-1, ZFIN:ZDB-PUB-020730-6, ZFIN:ZDB-PUB-081114-19] synonym: "Hi" EXACT [] xref: TAO:0006000 xref: ZFIN:ZDB-ANAT-090922-289 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0000032 ! hypothalamus relationship: start ZFS:0000033 ! Hatching:Long-pec created_by: giles creation_date: 2009-03-26T02:23:30Z [Term] id: ZFA:0007000 name: macula saccule namespace: zebrafish_anatomy def: "Portion of tissue that is a patch of thickened, pseudostratified epithelium in the inner ear, consisting of regular arrays of sensory hair cells interspersed with supporting cells. The macula saccule senses linear acceleration and gravity. In juveniles the macula saccule is oriented vertically in a plane running along the anteroposterior body axis. It covers the medial wall of the saccule along most of its length." [ZFIN:ZDB-PUB-010912-7] synonym: "saccular macula" EXACT [] xref: TAO:0007000 xref: ZFIN:ZDB-ANAT-070517-48 is_a: ZFA:0000386 ! macula relationship: develops_from ZFA:0000558 ! posterior macula relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000428 ! saccule relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0007001 name: dorso-rostral cluster namespace: zebrafish_anatomy def: "Early-forming telencephalic neural cluster. Neurons of the dorso-rostral cluster (drc) extend axons to form the supra-optic tract (SOT) and the anterior commissure (AC)." [ZFIN:ZDB-PUB-961014-955] synonym: "dorsal rostral cluster" EXACT [] synonym: "dorsorostral cluster" EXACT [] synonym: "drc" EXACT [] xref: TAO:0007001 xref: ZFIN:ZDB-ANAT-060331-69 relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0000079 ! telencephalon relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0007002 name: ventro-rostral cluster namespace: zebrafish_anatomy def: "Early-forming neural cluster located in the rostral diencephalon. At 19 h, axons arising from the vrc grow caudally to pioneer the tract of the postoptic commissure (TPOC)." [ZFIN:ZDB-PUB-961014-955] synonym: "ventral rostral cluster" EXACT [] synonym: "ventrorostral cluster" EXACT [] synonym: "vrc" EXACT [] xref: TAO:0007002 xref: ZFIN:ZDB-ANAT-060331-70 relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0000101 ! diencephalon relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0007003 name: ventro-caudal cluster namespace: zebrafish_anatomy def: "Early-forming neural cluster of the ventral midbrain. At 16 h, axons of the vcc grow caudally to pioneer the medial longitudinal fasciculus (MLF), which is part of the larger ventral longitudinal tract (VLT). Later, neurons from this cluster project axons rostrally into the tract of the post-optic commissure (TPOC)." [ZFIN:ZDB-PUB-961014-955] synonym: "vcc" EXACT [] synonym: "ventral caudal cluster" EXACT [] synonym: "ventrocaudal cluster" EXACT [] xref: TAO:0007003 xref: ZFIN:ZDB-ANAT-060331-71 relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0000128 ! midbrain relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0007004 name: epiphysial cluster namespace: zebrafish_anatomy def: "Early-developing neuronal cluster of the epiphysis. By 24 hpf the pioneer axon of the dorsoventral diencephalic tract (DVDT) has arisen from the ec and grown ventrally. As this axon encounters axons of the TPOC, it makes a near-90 rostral turn and grows rostrally among axons of the TPOC growing in the opposite direction." [ZFIN:ZDB-PUB-961014-955] synonym: "ec" EXACT [] xref: TAO:0007004 xref: ZFIN:ZDB-ANAT-060331-72 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0000019 ! epiphysis relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0007005 name: hemal prezygapophysis namespace: zebrafish_anatomy alt_id: ZFA:0001380 def: "Hemal prezygapophyses are paired, anteromedially directed processes arising from the bases of hemal arches, ligamentously joined to the hemal postzygapophyses of the preceding vertebra. Posterior caudal vertebrae close to the caudal fin lack hemal prezygopophyses." [ZFIN:curator] synonym: "haemal prezygapophysis" EXACT [] synonym: "hemal prezygopophysis" EXACT [] xref: TAO:0007005 xref: ZFIN:ZDB-ANAT-070928-187 is_a: ZFA:0001591 ! endochondral bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000519 ! hemal arch relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0007006 name: lip namespace: zebrafish_anatomy def: "Surface structure that is one of the fleshy folds surrounding the opening of the mouth." [http:www.medterms.com/script/main/art.asp?articlekey=9458] synonym: "lips" EXACT PLURAL [] xref: TAO:0007006 xref: ZFIN:ZDB-ANAT-070928-188 is_a: ZFA:0000292 ! surface structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000547 ! mouth relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0007007 name: pallium namespace: zebrafish_anatomy def: "The mantle of gray matter forming the cerebral cortex." [http://www.thefreedictionary.com/pallium] synonym: "pallia" EXACT PLURAL [] xref: TAO:0007007 xref: ZFIN:ZDB-ANAT-070928-189 is_a: ZFA:0001681 ! grey matter relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000008 ! brain relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0007008 name: ventral intermandibularis anterior namespace: zebrafish_anatomy def: "Is a mandibular muscle that attaches to Meckel's cartilage and functions during jaw closing." [ZFIN:ZDB-PUB-020703-2, ZFIN:ZDB-PUB-061010-9] synonym: "ventral intermandibulari anterior" EXACT PLURAL [] xref: TAO:0007008 xref: ZFIN:ZDB-ANAT-080417-127 is_a: ZFA:0005145 ! muscle relationship: develops_from ZFA:0000369 ! intermandibularis relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0007009 name: nerve namespace: zebrafish_anatomy def: "A portion of tissue which is a fasiculated group of axons." [ZFIN:curator] synonym: "nerves" EXACT PLURAL [] xref: TAO:0007009 xref: ZFIN:ZDB-ANAT-070928-190 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0007010 name: eminentia thalami namespace: zebrafish_anatomy def: "Part of the forebrain that is ventral to the ventral thalamus and dorsal to the preoptic area. See page 44 of the Atlas of Early Zebrafish Brain Development." [ISBN:0444517383, ZFIN:YMB] xref: TAO:0007010 xref: ZFIN:ZDB-ANAT-070928-191 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000109 ! forebrain relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0007011 name: vagal root namespace: zebrafish_anatomy def: "Part of cranial nerve X." [ZFIN:curator] synonym: "rX" EXACT [] synonym: "vagus root" EXACT [] xref: TAO:0007011 xref: ZFIN:ZDB-ANAT-070928-192 is_a: ZFA:0001663 ! cranial nerve root relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000453 ! cranial nerve X relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0007012 name: lateral forebrain bundle namespace: zebrafish_anatomy synonym: "lateral forebrain bundles" EXACT PLURAL [] xref: TAO:0007012 xref: ZFIN:ZDB-ANAT-070928-193 is_a: ZFA:0000145 ! CNS white matter relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0007013 name: preplacodal ectoderm namespace: zebrafish_anatomy def: "Non neural ectoderm that surrounds the presumptive neural plate and gives rise to neurogenic placodes." [ZFIN:curator] synonym: "panplacodal ectoderm" EXACT [ZFIN:ZDB-PUB-070122-31] xref: TAO:0007013 xref: ZFIN:ZDB-ANAT-070928-194 is_a: ZFA:0001178 ! non neural ectoderm relationship: end ZFS:0000022 ! Gastrula:Bud relationship: start ZFS:0000020 ! Gastrula:75%-epiboly [Term] id: ZFA:0007014 name: anterior presumptive neural plate namespace: zebrafish_anatomy xref: TAO:0007014 xref: ZFIN:ZDB-ANAT-070928-195 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000020 ! Gastrula:75%-epiboly relationship: part_of ZFA:0000063 ! presumptive neural plate relationship: start ZFS:0000019 ! Gastrula:Shield [Term] id: ZFA:0007015 name: posterior presumptive neural plate namespace: zebrafish_anatomy xref: TAO:0007015 xref: ZFIN:ZDB-ANAT-070928-196 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000020 ! Gastrula:75%-epiboly relationship: part_of ZFA:0000063 ! presumptive neural plate relationship: start ZFS:0000019 ! Gastrula:Shield [Term] id: ZFA:0007016 name: anterior neural plate namespace: zebrafish_anatomy xref: TAO:0007016 xref: ZFIN:ZDB-ANAT-070928-197 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007014 ! anterior presumptive neural plate relationship: end ZFS:0000022 ! Gastrula:Bud relationship: part_of ZFA:0000132 ! neural plate relationship: start ZFS:0000021 ! Gastrula:90%-epiboly [Term] id: ZFA:0007017 name: posterior neural plate namespace: zebrafish_anatomy xref: TAO:0007017 xref: ZFIN:ZDB-ANAT-070928-198 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007015 ! posterior presumptive neural plate relationship: end ZFS:0000024 ! Segmentation:5-9 somites relationship: part_of ZFA:0000132 ! neural plate relationship: start ZFS:0000021 ! Gastrula:90%-epiboly [Term] id: ZFA:0007018 name: forebrain neural plate namespace: zebrafish_anatomy xref: TAO:0007018 xref: ZFIN:ZDB-ANAT-070928-199 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000062 ! presumptive forebrain relationship: end ZFS:0000022 ! Gastrula:Bud relationship: part_of ZFA:0007016 ! anterior neural plate relationship: start ZFS:0000021 ! Gastrula:90%-epiboly [Term] id: ZFA:0007019 name: midbrain neural plate namespace: zebrafish_anatomy xref: TAO:0007019 xref: ZFIN:ZDB-ANAT-070928-200 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000148 ! presumptive midbrain relationship: end ZFS:0000022 ! Gastrula:Bud relationship: part_of ZFA:0007016 ! anterior neural plate relationship: start ZFS:0000021 ! Gastrula:90%-epiboly [Term] id: ZFA:0007020 name: forebrain midbrain boundary neural plate namespace: zebrafish_anatomy xref: TAO:0007020 xref: ZFIN:ZDB-ANAT-070928-201 is_a: ZFA:0001689 ! anatomical line relationship: develops_from ZFA:0001368 ! presumptive forebrain midbrain boundary relationship: end ZFS:0000022 ! Gastrula:Bud relationship: part_of ZFA:0007016 ! anterior neural plate relationship: start ZFS:0000021 ! Gastrula:90%-epiboly [Term] id: ZFA:0007021 name: spinal cord neural plate namespace: zebrafish_anatomy xref: TAO:0007021 xref: ZFIN:ZDB-ANAT-070928-202 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000417 ! presumptive spinal cord relationship: end ZFS:0000024 ! Segmentation:5-9 somites relationship: part_of ZFA:0007017 ! posterior neural plate relationship: start ZFS:0000021 ! Gastrula:90%-epiboly [Term] id: ZFA:0007022 name: hindbrain neural plate namespace: zebrafish_anatomy xref: TAO:0007022 xref: ZFIN:ZDB-ANAT-070928-203 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000569 ! presumptive hindbrain relationship: end ZFS:0000024 ! Segmentation:5-9 somites relationship: part_of ZFA:0007017 ! posterior neural plate relationship: start ZFS:0000021 ! Gastrula:90%-epiboly [Term] id: ZFA:0007023 name: posterior neural keel namespace: zebrafish_anatomy xref: TAO:0007023 xref: ZFIN:ZDB-ANAT-070928-204 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007017 ! posterior neural plate relationship: end ZFS:0000025 ! Segmentation:10-13 somites relationship: part_of ZFA:0000131 ! neural keel relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0007024 name: anterior neural keel namespace: zebrafish_anatomy xref: TAO:0007024 xref: ZFIN:ZDB-ANAT-070928-205 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007016 ! anterior neural plate relationship: end ZFS:0000023 ! Segmentation:1-4 somites relationship: part_of ZFA:0000131 ! neural keel relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0007025 name: midbrain neural keel namespace: zebrafish_anatomy xref: TAO:0007025 xref: ZFIN:ZDB-ANAT-070928-206 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007019 ! midbrain neural plate relationship: end ZFS:0000023 ! Segmentation:1-4 somites relationship: part_of ZFA:0007024 ! anterior neural keel relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0007026 name: forebrain neural keel namespace: zebrafish_anatomy xref: TAO:0007026 xref: ZFIN:ZDB-ANAT-070928-207 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007018 ! forebrain neural plate relationship: end ZFS:0000023 ! Segmentation:1-4 somites relationship: part_of ZFA:0007024 ! anterior neural keel relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0007027 name: forebrain midbrain boundary neural keel namespace: zebrafish_anatomy xref: TAO:0007027 xref: ZFIN:ZDB-ANAT-070928-208 is_a: ZFA:0001689 ! anatomical line relationship: develops_from ZFA:0007020 ! forebrain midbrain boundary neural plate relationship: end ZFS:0000023 ! Segmentation:1-4 somites relationship: part_of ZFA:0007024 ! anterior neural keel relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0007028 name: spinal cord neural keel namespace: zebrafish_anatomy xref: TAO:0007028 xref: ZFIN:ZDB-ANAT-070928-209 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000025 ! Segmentation:10-13 somites relationship: part_of ZFA:0007023 ! posterior neural keel relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0007029 name: hindbrain neural keel namespace: zebrafish_anatomy xref: TAO:0007029 xref: ZFIN:ZDB-ANAT-070928-210 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007022 ! hindbrain neural plate relationship: end ZFS:0000025 ! Segmentation:10-13 somites relationship: part_of ZFA:0007023 ! posterior neural keel relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0007030 name: posterior neural rod namespace: zebrafish_anatomy xref: TAO:0007030 xref: ZFIN:ZDB-ANAT-070928-211 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007023 ! posterior neural keel relationship: end ZFS:0000026 ! Segmentation:14-19 somites relationship: part_of ZFA:0000133 ! neural rod relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0007031 name: anterior neural rod namespace: zebrafish_anatomy xref: TAO:0007031 xref: ZFIN:ZDB-ANAT-070928-212 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007024 ! anterior neural keel relationship: end ZFS:0000025 ! Segmentation:10-13 somites relationship: part_of ZFA:0000133 ! neural rod relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0007032 name: midbrain neural rod namespace: zebrafish_anatomy xref: TAO:0007032 xref: ZFIN:ZDB-ANAT-070928-213 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007025 ! midbrain neural keel relationship: end ZFS:0000025 ! Segmentation:10-13 somites relationship: part_of ZFA:0007031 ! anterior neural rod relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0007033 name: forebrain midbrain boundary neural rod namespace: zebrafish_anatomy xref: TAO:0007033 xref: ZFIN:ZDB-ANAT-070928-214 is_a: ZFA:0001689 ! anatomical line relationship: develops_from ZFA:0007027 ! forebrain midbrain boundary neural keel relationship: end ZFS:0000025 ! Segmentation:10-13 somites relationship: part_of ZFA:0007031 ! anterior neural rod relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0007034 name: forebrain neural rod namespace: zebrafish_anatomy xref: TAO:0007034 xref: ZFIN:ZDB-ANAT-070928-215 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007026 ! forebrain neural keel relationship: end ZFS:0000025 ! Segmentation:10-13 somites relationship: part_of ZFA:0007031 ! anterior neural rod relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0007035 name: spinal cord neural rod namespace: zebrafish_anatomy xref: TAO:0007035 xref: ZFIN:ZDB-ANAT-070928-216 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000026 ! Segmentation:14-19 somites relationship: part_of ZFA:0007030 ! posterior neural rod relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0007036 name: hindbrain neural rod namespace: zebrafish_anatomy xref: TAO:0007036 xref: ZFIN:ZDB-ANAT-070928-217 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007029 ! hindbrain neural keel relationship: end ZFS:0000026 ! Segmentation:14-19 somites relationship: part_of ZFA:0007030 ! posterior neural rod relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0007037 name: posterior neural tube namespace: zebrafish_anatomy xref: TAO:0007037 xref: ZFIN:ZDB-ANAT-070928-218 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007030 ! posterior neural rod relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0001135 ! neural tube relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0007038 name: anterior neural tube namespace: zebrafish_anatomy xref: TAO:0007038 xref: ZFIN:ZDB-ANAT-070928-219 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007031 ! anterior neural rod relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0001135 ! neural tube relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0007039 name: midbrain neural tube namespace: zebrafish_anatomy xref: TAO:0007039 xref: ZFIN:ZDB-ANAT-070928-220 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007032 ! midbrain neural rod relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0007038 ! anterior neural tube relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0007040 name: forebrain midbrain boundary neural tube namespace: zebrafish_anatomy xref: TAO:0007040 xref: ZFIN:ZDB-ANAT-070928-221 is_a: ZFA:0001689 ! anatomical line relationship: develops_from ZFA:0007033 ! forebrain midbrain boundary neural rod relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0007038 ! anterior neural tube relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0007041 name: forebrain neural tube namespace: zebrafish_anatomy xref: TAO:0007041 xref: ZFIN:ZDB-ANAT-070928-222 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007034 ! forebrain neural rod relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0007038 ! anterior neural tube relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0007042 name: spinal cord neural tube namespace: zebrafish_anatomy xref: TAO:0007042 xref: ZFIN:ZDB-ANAT-070928-223 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0007037 ! posterior neural tube relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0007043 name: hindbrain neural tube namespace: zebrafish_anatomy xref: TAO:0007043 xref: ZFIN:ZDB-ANAT-070928-224 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007036 ! hindbrain neural rod relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0007037 ! posterior neural tube relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0007044 name: midbrain hindbrain boundary neural plate namespace: zebrafish_anatomy synonym: "midbrain-hindbrain boundary neural plate" EXACT [] xref: TAO:0007044 xref: ZFIN:ZDB-ANAT-070928-225 is_a: ZFA:0001689 ! anatomical line relationship: develops_from ZFA:0001187 ! presumptive midbrain hindbrain boundary relationship: end ZFS:0000024 ! Segmentation:5-9 somites relationship: part_of ZFA:0000132 ! neural plate relationship: start ZFS:0000021 ! Gastrula:90%-epiboly [Term] id: ZFA:0007045 name: midbrain hindbrain boundary neural keel namespace: zebrafish_anatomy synonym: "midbrain-hindbrain boundary neural keel" EXACT [] xref: TAO:0007045 xref: ZFIN:ZDB-ANAT-070928-226 is_a: ZFA:0001689 ! anatomical line relationship: develops_from ZFA:0007044 ! midbrain hindbrain boundary neural plate relationship: end ZFS:0000025 ! Segmentation:10-13 somites relationship: part_of ZFA:0000131 ! neural keel relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0007046 name: midbrain hindbrain boundary neural rod namespace: zebrafish_anatomy synonym: "midbrain-hindbrain boundary neural rod" EXACT [] xref: TAO:0007046 xref: ZFIN:ZDB-ANAT-070928-227 is_a: ZFA:0001689 ! anatomical line relationship: develops_from ZFA:0007045 ! midbrain hindbrain boundary neural keel relationship: end ZFS:0000026 ! Segmentation:14-19 somites relationship: part_of ZFA:0000133 ! neural rod relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0007047 name: midbrain hindbrain boundary neural tube namespace: zebrafish_anatomy synonym: "midbrain-hindbrain boundary neural tube" EXACT [] xref: TAO:0007047 xref: ZFIN:ZDB-ANAT-070928-228 is_a: ZFA:0001689 ! anatomical line relationship: develops_from ZFA:0007046 ! midbrain hindbrain boundary neural rod relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0001135 ! neural tube relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0007048 name: ventral intermandibularis posterior namespace: zebrafish_anatomy def: "Is a mandibular muscle that attaches Meckel's cartilage to the basihyal cartilage and functions in jaw opening." [ZFIN:ZDB-PUB-020703-2, ZFIN:ZDB-PUB-061010-9] synonym: "ventral intermandibulari posterior" EXACT PLURAL [] xref: TAO:0007048 xref: ZFIN:ZDB-ANAT-080417-128 is_a: ZFA:0005145 ! muscle relationship: develops_from ZFA:0000369 ! intermandibularis relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0007049 name: adductor mandibulae namespace: zebrafish_anatomy def: "Is a mandibular muscle that forms along the palatoquadrates and inserts on Meckel's cartilages and functions in jaw closing." [ZFIN:ZDB-PUB-020703-2, ZFIN:ZDB-PUB-050318-5] synonym: "dorsal adductor mandibulae" EXACT [] xref: TAO:0007049 xref: ZFIN:ZDB-ANAT-080417-129 is_a: ZFA:0000236 ! mandibular muscle relationship: end ZFS:0000041 ! Larval:Days 21-29 relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0007050 name: constrictor dorsalis namespace: zebrafish_anatomy synonym: "constrictors dorsalis" EXACT PLURAL [] xref: TAO:0007050 xref: ZFIN:ZDB-ANAT-080417-130 is_a: ZFA:0000236 ! mandibular muscle relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0007051 name: ventral interhyoideus namespace: zebrafish_anatomy def: "Is a hyoid muscle that has attachment sites on the basihyal and the posterior end of the ceratohyals and functions in jaw opening." [ZFIN:ZDB-PUB-020703-2] synonym: "ventral interhyoidei" EXACT PLURAL [] xref: TAO:0007051 xref: ZFIN:ZDB-ANAT-080417-131 is_a: ZFA:0000521 ! hyoid muscle relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0007052 name: hyohyoideus namespace: zebrafish_anatomy def: "Is a hyoid muscle that inserts at the most anterior basibranchial and also at the posterior ends of the ceratohyals and functions in jaw closure." [ZFIN:ZDB-PUB-020703-2] xref: TAO:0007052 xref: ZFIN:ZDB-ANAT-080417-132 is_a: ZFA:0000521 ! hyoid muscle relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0007053 name: dorsal adductor hyomandibulae namespace: zebrafish_anatomy def: "Is a hyoid muscle that attaches to the dorsomedial faces of the hyosymplectics." [ZFIN:ZDB-PUB-020703-2] synonym: "dorsal adductors hyomandibulae" EXACT PLURAL [] xref: TAO:0007053 xref: ZFIN:ZDB-ANAT-080417-133 is_a: ZFA:0000521 ! hyoid muscle relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000034 ! Hatching:Pec-fin [Term] id: ZFA:0007054 name: pillar of the anterior semicircular canal namespace: zebrafish_anatomy def: "Pillar of the semicircular canal around whose perimeter runs the anterior semicircular canal." [ZFIN:ZDB-PUB-961014-383] synonym: "anterior hub of the semicircular canal" EXACT [] synonym: "anterior pillar" EXACT [] synonym: "anterior pillar of the semicircular canal" EXACT [] synonym: "horizontal hub" RELATED [] xref: TAO:0007054 xref: ZFIN:ZDB-ANAT-080417-134 is_a: ZFA:0001717 ! pillar of the semicircular canal relationship: develops_from ZFA:0000232 ! otic vesicle lateral protrusion relationship: develops_from ZFA:0000469 ! otic vesicle anterior protrusion relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000314 ! anterior semicircular canal relationship: start ZFS:0000035 ! Larval:Protruding-mouth [Term] id: ZFA:0007055 name: pillar of the lateral semicircular canal namespace: zebrafish_anatomy def: "Pillar of the semicircular canal around whose perimeter runs the lateral semicircular canal." [ZFIN:ZDB-PUB-961014-383] synonym: "lateral hub of the semicircular canal" EXACT [] synonym: "ventral bar" EXACT [] synonym: "ventral pillar" EXACT [] synonym: "ventral piller of the semicircular canal" EXACT [] xref: TAO:0007055 xref: ZFIN:ZDB-ANAT-080417-135 is_a: ZFA:0001717 ! pillar of the semicircular canal relationship: develops_from ZFA:0001716 ! otic vesicle ventral protrusion relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000220 ! lateral semicircular canal relationship: start ZFS:0000035 ! Larval:Protruding-mouth [Term] id: ZFA:0007056 name: pillar of the posterior semicircular canal namespace: zebrafish_anatomy def: "Pillar of the semicircular canal around whose perimeter runs the posterior semicircular canal." [ZFIN:ZDB-PUB-961014-383] synonym: "horizontal hub" RELATED [] synonym: "posterior hub of the semicircular canal" EXACT [] synonym: "posterior pillar" EXACT [] synonym: "posterior pillar of the semicircular" EXACT [] xref: ZFIN:ZDB-ANAT-080417-136 is_a: ZFA:0001717 ! pillar of the semicircular canal relationship: develops_from ZFA:0000232 ! otic vesicle lateral protrusion relationship: develops_from ZFA:0000412 ! otic vesicle posterior protrusion relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000262 ! posterior semicircular canal relationship: start ZFS:0000035 ! Larval:Protruding-mouth [Term] id: ZFA:0007057 name: ocular blood vessel namespace: zebrafish_anatomy synonym: "eye vasculature" EXACT [] synonym: "ocular vasculature" RELATED [] synonym: "optic vasculature" EXACT [] xref: TAO:0007057 xref: ZFIN:ZDB-ANAT-080417-137 is_a: ZFA:0005297 ! cranial blood vessel relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0007058 name: roof plate namespace: zebrafish_anatomy def: "Multi-tissue structure that is the dorsal-most aspect of the devleloping neural tube." [ZFIN:curator] xref: TAO:0007058 xref: ZFIN:ZDB-ANAT-080417-138 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0000012 ! central nervous system relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0007059 name: neurogenic field namespace: zebrafish_anatomy def: "Portion of tissue fated to develop into neurogenic placode." [ZFIN:curator] synonym: "neurogenic fields" EXACT PLURAL [] xref: TAO:0007059 xref: ZFIN:ZDB-ANAT-080417-139 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007013 ! preplacodal ectoderm relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0007060 name: dorsolateral field namespace: zebrafish_anatomy def: "Neurogenic field fated to develop into a dorsolateral placode." [ZFIN:curator] synonym: "dorsolateral fields" EXACT PLURAL [] xref: TAO:0007060 xref: ZFIN:ZDB-ANAT-080417-140 is_a: ZFA:0007059 ! neurogenic field relationship: end ZFS:0000022 ! Gastrula:Bud relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0007061 name: epibranchial field namespace: zebrafish_anatomy def: "Neurogenic field fated to develop into an epibranchial placode." [ZFIN:curator] synonym: "epibranchial fields" EXACT PLURAL [] xref: TAO:0007061 xref: ZFIN:ZDB-ANAT-080417-141 is_a: ZFA:0007059 ! neurogenic field relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0007062 name: olfactory field namespace: zebrafish_anatomy def: "Neurogenic field fated to develop into the olfactory placode." [ZFIN:curator] synonym: "olfactory fields" EXACT PLURAL [] xref: TAO:0007062 xref: ZFIN:ZDB-ANAT-080417-142 is_a: ZFA:0007059 ! neurogenic field relationship: end ZFS:0000025 ! Segmentation:10-13 somites relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0007063 name: neural crest hindbrain namespace: zebrafish_anatomy def: "Cranial neural crest that is part of the hindbrain." [ZFIN:curator] synonym: "rhombencephalic neural crest" EXACT [] xref: TAO:0007063 xref: ZFIN:ZDB-ANAT-090922-290 is_a: ZFA:0001194 ! cranial neural crest relationship: end ZFS:0000028 ! Segmentation:26+ somites relationship: start ZFS:0000000 ! Unknown created_by: Yvonne Bradford creation_date: 2009-04-29T04:51:35Z [Term] id: ZFA:0007064 name: mandibular neural crest namespace: zebrafish_anatomy def: "Cranial neural crest that migrates into the mandibular arch." [ZFIN:ZDB-PUB-061108-6] xref: TAO:0007064 xref: ZFIN:ZDB-ANAT-090922-291 is_a: ZFA:0001194 ! cranial neural crest relationship: end ZFS:0000028 ! Segmentation:26+ somites relationship: part_of ZFA:0007063 ! neural crest hindbrain relationship: start ZFS:0000000 ! Unknown created_by: Yvonne Bradford creation_date: 2009-04-29T04:53:53Z [Term] id: ZFA:0007065 name: hyoid neural crest namespace: zebrafish_anatomy def: "Cranial neural crest that migrates into the hyoid arch." [ZFIN:ZDB-PUB-061108-6] xref: TAO:0007065 xref: ZFIN:ZDB-ANAT-090922-292 is_a: ZFA:0001194 ! cranial neural crest relationship: end ZFS:0000028 ! Segmentation:26+ somites relationship: part_of ZFA:0007063 ! neural crest hindbrain relationship: start ZFS:0000000 ! Unknown created_by: Yvonne Bradford creation_date: 2009-04-29T04:56:12Z [Term] id: ZFA:0007066 name: glossopharyngeal neural crest namespace: zebrafish_anatomy def: "Cranial neural crest which gives rise to the glossopharyngeal ganglion." [ZFIN:curator] xref: TAO:0007066 xref: ZFIN:ZDB-ANAT-091221-50 is_a: ZFA:0001194 ! cranial neural crest relationship: end ZFS:0000028 ! Segmentation:26+ somites relationship: start ZFS:0000000 ! Unknown created_by: Yvonne Bradford creation_date: 2009-11-04T03:39:42Z [Term] id: ZFA:0007067 name: vagal ganglion namespace: zebrafish_anatomy synonym: "gX" EXACT [] xref: TAO:0007067 xref: ZFIN:ZDB-ANAT-100614-90 is_a: ZFA:0001555 ! epibranchial ganglion relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown created_by: Yvonne Bradford creation_date: 2010-04-21T09:45:38Z [Term] id: ZFA:0009000 name: cell namespace: zebrafish_anatomy def: "Anatomical structure that has as its parts a maximally connected cell compartment surrounded by a plasma membrane." [CARO:mah] synonym: "cells" EXACT PLURAL [] xref: CARO:0000013 xref: CL:0000000 xref: TAO:0009000 xref: ZFIN:ZDB-ANAT-060816-76 is_a: ZFA:0000037 ! anatomical structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001094 ! whole organism relationship: start ZFS:0000001 ! Zygote:1-cell [Term] id: ZFA:0009001 name: receptor cell (sensu Animalia) namespace: zebrafish_anatomy synonym: "receptor cells (sensu Animalia)" EXACT PLURAL [] xref: CL:0000006 xref: TAO:0009001 xref: ZFIN:ZDB-ANAT-070308-1 is_a: ZFA:0009248 ! neuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009002 name: early embryonic cell namespace: zebrafish_anatomy synonym: "early embryonic cells" EXACT PLURAL [] xref: CL:0000007 xref: TAO:0009002 xref: ZFIN:ZDB-ANAT-070308-2 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009003 name: cranial neural crest cell namespace: zebrafish_anatomy synonym: "cranial neural crest cells" EXACT PLURAL [] xref: CL:0000008 xref: TAO:0009003 xref: ZFIN:ZDB-ANAT-070308-3 is_a: ZFA:0009165 ! neural crest cell relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009004 name: trunk neural crest cell namespace: zebrafish_anatomy synonym: "trunk neural crest cells" EXACT PLURAL [] xref: CL:0000011 xref: TAO:0009004 xref: ZFIN:ZDB-ANAT-070308-4 is_a: ZFA:0009165 ! neural crest cell relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0001024 ! trunk neural crest relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009005 name: spermatocyte namespace: zebrafish_anatomy def: "A male germ cell that develops from spermatogonia. The euploid primary spermatocytes undergo meiosis and give rise to the haploid secondary spermatocytes which in turn give rise to spermatids." [CL:curator] synonym: "spermatocytes" EXACT PLURAL [] xref: CL:0000017 xref: TAO:0009005 xref: ZFIN:ZDB-ANAT-060131-74 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009007 ! spermatogonium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000598 ! testis relationship: start ZFS:0000043 ! Juvenile:Days 45-89 [Term] id: ZFA:0009006 name: sperm namespace: zebrafish_anatomy def: "A mature male germ cell that develops from a spermatid." [CL:curator] synonym: "sperm cell" EXACT [] synonym: "spermatozoid" EXACT [] synonym: "spermatozoon" EXACT [] xref: CL:0000019 xref: TAO:0009006 xref: ZFIN:ZDB-ANAT-070308-5 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009007 name: spermatogonium namespace: zebrafish_anatomy alt_id: ZFA:0001337 def: "An euploid male germ cell of an early stage of spermatogenesis." [CL:curator] synonym: "spermatogonia" EXACT PLURAL [] xref: CL:0000020 xref: TAO:0001337 xref: TAO:0009007 xref: ZFIN:ZDB-ANAT-070308-6 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000598 ! testis relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009009 name: neuron neural crest derived namespace: zebrafish_anatomy xref: CL:0000029 xref: TAO:0009009 xref: ZFIN:ZDB-ANAT-070308-8 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009165 ! neural crest cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009010 name: glioblast namespace: zebrafish_anatomy synonym: "glioblasts" EXACT PLURAL [] xref: CL:0000030 xref: TAO:0009010 xref: ZFIN:ZDB-ANAT-050915-148 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0001120 ! neuroectoderm relationship: develops_from ZFA:0009080 ! neurectodermal cell relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0009011 name: neuroblast namespace: zebrafish_anatomy synonym: "neuroblasts" EXACT PLURAL [] xref: CL:0000031 xref: TAO:0009011 xref: ZFIN:ZDB-ANAT-070308-9 is_a: ZFA:0009019 ! neuronal stem cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009012 name: neuroplacodal cell namespace: zebrafish_anatomy synonym: "neuroplacodal cells" EXACT PLURAL [] xref: CL:0000032 xref: TAO:0009012 xref: ZFIN:ZDB-ANAT-070308-10 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009013 name: single fate stem cell namespace: zebrafish_anatomy synonym: "single fate stem cells" EXACT PLURAL [] xref: CL:0000035 xref: TAO:0009013 xref: ZFIN:ZDB-ANAT-070308-11 is_a: ZFA:0009307 ! somatic stem cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009014 name: hematopoietic stem cell namespace: zebrafish_anatomy def: "A stem cell from which all cells of the lymphoid and myeloid lineages develop, including blood cells and cells of the immune system." [CL:curator] synonym: "colony forming unit hematopoietic" RELATED [] synonym: "hematopoietic progenitor cell" RELATED [] synonym: "hemopoietic progenitor cell" RELATED [] synonym: "hemopoietic stem cell" EXACT [] synonym: "HSC" EXACT [] xref: CL:0000037 xref: TAO:0009014 xref: ZFIN:ZDB-ANAT-050915-141 is_a: ZFA:0009020 ! multi fate stem cell relationship: develops_from ZFA:0009258 ! angioblastic mesenchymal cell relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005023 ! hematopoietic system relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0009015 name: erythroid progenitor cell namespace: zebrafish_anatomy def: "A progenitor cell committed to the erythroid lineage." [ZFIN:ZDB-PUB-070221-1] synonym: "BFU-E" RELATED [] synonym: "blast forming unit erythroid" RELATED [] synonym: "burst forming unit erythroid" RELATED [] synonym: "CFU-E" RELATED [] synonym: "colony forming unit erythroid" RELATED [] synonym: "erythroid stem cell" RELATED [] xref: CL:0000038 xref: TAO:0009015 xref: ZFIN:ZDB-ANAT-070308-12 is_a: ZFA:0009356 ! myeloid progenitor cell relationship: develops_from ZFA:0009022 ! megakaryocyte erythroid progenitor cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009016 name: germ line cell namespace: zebrafish_anatomy synonym: "germ line cells" EXACT PLURAL [] xref: CL:0000039 xref: TAO:0009016 xref: ZFIN:ZDB-ANAT-070308-13 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009017 name: monoblast namespace: zebrafish_anatomy def: "A myeloid progenitor cell committed to the monocyte lineage." [CL:curator, http:www.copewithcytokines.de] synonym: "CFU-M" EXACT [] synonym: "colony forming unit macrophage" EXACT [] synonym: "monocyte stem cell" EXACT [] xref: CL:0000040 xref: TAO:0009017 xref: ZFIN:ZDB-ANAT-060331-82 is_a: ZFA:0009356 ! myeloid progenitor cell relationship: develops_from ZFA:0009251 ! granulocyte monocyte progenitor cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009018 name: neutrophilic myeloblast namespace: zebrafish_anatomy def: "A myeloblast committed to the neutrophil lineage. A myeloblast is the most primitive precursor in the granulocytic series, having fine, evenly distributed chromatin, several nucleoli, and a nongranular basophilic cytoplasm." [ZFIN:ZDB-PUB-070221-1] synonym: "neutrophilic granuloblast" RELATED [] xref: CL:0000042 xref: TAO:0009018 xref: ZFIN:ZDB-ANAT-060331-76 is_a: ZFA:0009353 ! myeloblast relationship: develops_from ZFA:0009352 ! neutrophil progenitor cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009019 name: neuronal stem cell namespace: zebrafish_anatomy synonym: "neuronal stem cells" EXACT PLURAL [] xref: CL:0000047 xref: TAO:0009019 xref: ZFIN:ZDB-ANAT-070308-14 is_a: ZFA:0009020 ! multi fate stem cell relationship: develops_from ZFA:0009080 ! neurectodermal cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009020 name: multi fate stem cell namespace: zebrafish_anatomy def: "A stem cell that can give rise to mulitple lineages of cells." [CL:curator] synonym: "multipotent stem cell" EXACT [] xref: CL:0000048 xref: TAO:0009020 xref: ZFIN:ZDB-ANAT-070308-15 is_a: ZFA:0009307 ! somatic stem cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009021 name: common myeloid progenitor namespace: zebrafish_anatomy def: "A progenitor cell committed to myeloid lineage, including the megakaryocyte and erythroid lineages." [ZFIN:ZDB-PUB-070221-2] synonym: "CMP" EXACT [ZFIN:ZDB-PUB-070221-2] synonym: "colony forming unit granulocyte, erythrocyte, macrophage, and megakaryocyte" RELATED [ZFIN:ZDB-PUB-070221-2] synonym: "multipotential myeloid stem cell" RELATED [ZFIN:ZDB-PUB-070221-2] synonym: "myeloid stem cell" RELATED [ZFIN:ZDB-PUB-070221-2] synonym: "pluripotent stem cell (bone marrow)" RELATED [ZFIN:ZDB-PUB-070221-2] xref: CL:0000049 xref: TAO:0009021 xref: ZFIN:ZDB-ANAT-060331-73 is_a: ZFA:0009356 ! myeloid progenitor cell relationship: develops_from ZFA:0009014 ! hematopoietic stem cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009022 name: megakaryocyte erythroid progenitor cell namespace: zebrafish_anatomy def: "A progenitor cell committed to the megakaryocyte and erythroid lineages." [CL:curator] synonym: "colony forming unit erythroid megakaryocyte" EXACT [] synonym: "MEP" EXACT [] xref: CL:0000050 xref: TAO:0009022 xref: ZFIN:ZDB-ANAT-070308-16 is_a: ZFA:0009356 ! myeloid progenitor cell relationship: develops_from ZFA:0009021 ! common myeloid progenitor relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009023 name: common lymphocyte progenitor namespace: zebrafish_anatomy def: "A progenitor cell committed to the lymphoid lineage with phenotype Lin negative, CD117 low, Sca-1 low and CD127 positive." [CL:curator] synonym: "CLP" EXACT [] synonym: "committed lymphopoietic stem cell" RELATED [] synonym: "early lymphocyte progenitor" RELATED [] synonym: "ELP" RELATED [] synonym: "lymphoid stem cell" RELATED [] synonym: "lymphopoietic stem cell" RELATED [] xref: CL:0000051 xref: TAO:0009023 xref: ZFIN:ZDB-ANAT-050915-142 is_a: ZFA:0009355 ! lymphoid progenitor cell relationship: develops_from ZFA:0009014 ! hematopoietic stem cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0009024 name: totipotent stem cell namespace: zebrafish_anatomy def: "A stem cell from which all cells of the body can form." [CL:curator] synonym: "totipotent stem cells" EXACT PLURAL [] xref: CL:0000052 xref: TAO:0009024 xref: ZFIN:ZDB-ANAT-070308-17 is_a: ZFA:0009307 ! somatic stem cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009025 name: myoblast namespace: zebrafish_anatomy def: "An embryonic (precursor) cell of the myogenic lineage that develops from the mesoderm. They undergo proliferation, migrate to their various sites, and then differentiate into the appropriate form of myocytes." [CL:curator] synonym: "myoblasts" EXACT PLURAL [] xref: CL:0000056 xref: TAO:0009025 xref: ZFIN:ZDB-ANAT-050915-157 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009179 ! muscle stem cell relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0009026 name: fibroblast namespace: zebrafish_anatomy def: "A connective tissue cell which secretes an extracellular matrix rich in collagen and other macromolecules." [CL:curator] comment: Not in CL. synonym: "fibroblasts" EXACT PLURAL [] xref: CL:0000057 xref: TAO:0009026 xref: ZFIN:ZDB-ANAT-070308-18 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009081 ! mesenchymal cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009027 name: chondroblast namespace: zebrafish_anatomy synonym: "chondroblasts" EXACT PLURAL [] xref: CL:0000058 xref: TAO:0009027 xref: ZFIN:ZDB-ANAT-050915-153 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0000041 ! mesoderm relationship: develops_from ZFA:0009081 ! mesenchymal cell relationship: develops_from ZFA:0009138 ! mesodermal cell relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0009028 name: ameloblast namespace: zebrafish_anatomy def: "A cylindrical epithelial cell in the innermost layer of the enamal organ. Their functions include contribution to the development of the dentinoenamel junction by the deposition of a layer of the matrix, thus producing the foundation for the prisms (the structural units of the dental enamal), and production of the matrix for the enamel prisms and interprismatic substance. (From Jablonski's Dictionary of Dentistry, 1992)." [CL:curator] synonym: "ameloblasts" EXACT PLURAL [] xref: CL:0000059 xref: TAO:0009028 xref: ZFIN:ZDB-ANAT-070308-19 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009165 ! neural crest cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009029 name: odontoblast namespace: zebrafish_anatomy synonym: "odontoblasts" EXACT PLURAL [] xref: CL:0000060 xref: TAO:0009029 xref: ZFIN:ZDB-ANAT-070308-20 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009003 ! cranial neural crest cell relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005141 ! tooth pulp relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009030 name: cementoblast namespace: zebrafish_anatomy def: "A cell of ectomesenchymal origin concerned with the formation of the layer of cementum on the roots of teeth." [ISBN:0781733901] synonym: "cementoblasts" EXACT PLURAL [] xref: CL:0000061 xref: TAO:0009030 xref: ZFIN:ZDB-ANAT-070308-21 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005138 ! dental organ relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009031 name: osteoblast namespace: zebrafish_anatomy def: "A bone-forming cell which secretes an extracellular matrix. Hydroxyapatite crystals are then deposited into the matrix to form bone." [CL:curator] synonym: "osteoblasts" EXACT PLURAL [] xref: CL:0000062 xref: TAO:0009031 xref: ZFIN:ZDB-ANAT-070308-22 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009003 ! cranial neural crest cell relationship: develops_from ZFA:0009184 ! osteoprogenitor cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009032 name: ciliated cell namespace: zebrafish_anatomy synonym: "ciliated cells" EXACT PLURAL [] xref: CL:0000064 xref: TAO:0009032 xref: ZFIN:ZDB-ANAT-070308-23 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009033 name: ependymal cell namespace: zebrafish_anatomy def: "A neurectoderm derived cell that lines the neural lumen." [CL:curator] synonym: "ependymocyte" EXACT [] xref: CL:0000065 xref: TAO:0009033 xref: ZFIN:ZDB-ANAT-070308-24 is_a: ZFA:0009035 ! ciliated epithelial cell relationship: develops_from ZFA:0009306 ! neuroepithelial cell relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000396 ! nervous system relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009034 name: epithelial cell namespace: zebrafish_anatomy def: "A cell that is usually found in a two-dimensional sheet with a free surface." [CL:curator] synonym: "epithelial cells" EXACT PLURAL [] xref: CL:0000066 xref: TAO:0009034 xref: ZFIN:ZDB-ANAT-070308-25 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001486 ! epithelium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009035 name: ciliated epithelial cell namespace: zebrafish_anatomy synonym: "ciliated epithelial cells" EXACT PLURAL [] xref: CL:0000067 xref: TAO:0009035 xref: ZFIN:ZDB-ANAT-070308-26 is_a: ZFA:0009032 ! ciliated cell is_a: ZFA:0009038 ! columnar/cuboidal epithelial cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009036 name: blood vessel endothelial cell namespace: zebrafish_anatomy synonym: "blood vessel endothelial cells" EXACT PLURAL [] xref: CL:0000071 xref: TAO:0009036 xref: ZFIN:ZDB-ANAT-050915-152 is_a: ZFA:0009039 ! squamous epithelial cell is_a: ZFA:0009065 ! endothelial cell relationship: develops_from ZFA:0000041 ! mesoderm relationship: develops_from ZFA:0009138 ! mesodermal cell relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005257 ! blood vessel endothelium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009037 name: barrier epithelial cell namespace: zebrafish_anatomy synonym: "barrier epithelial cells" EXACT PLURAL [] xref: CL:0000073 xref: TAO:0009037 xref: ZFIN:ZDB-ANAT-070308-27 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009038 name: columnar/cuboidal epithelial cell namespace: zebrafish_anatomy synonym: "columnar/cuboidal epithelial cells" EXACT PLURAL [] xref: CL:0000075 xref: TAO:0009038 xref: ZFIN:ZDB-ANAT-070308-28 is_a: ZFA:0009034 ! epithelial cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009039 name: squamous epithelial cell namespace: zebrafish_anatomy synonym: "squamous epithelial cells" EXACT PLURAL [] xref: CL:0000076 xref: TAO:0009039 xref: ZFIN:ZDB-ANAT-070308-29 is_a: ZFA:0009034 ! epithelial cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009040 name: mesothelial cell namespace: zebrafish_anatomy synonym: "mesothelial cells" EXACT PLURAL [] xref: CL:0000077 xref: TAO:0009040 xref: ZFIN:ZDB-ANAT-070308-30 is_a: ZFA:0009039 ! squamous epithelial cell is_a: ZFA:0009130 ! lining cell relationship: develops_from ZFA:0009138 ! mesodermal cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009041 name: peridermal cell namespace: zebrafish_anatomy synonym: "peridermal cells" EXACT PLURAL [] xref: CL:0000078 xref: TAO:0009041 xref: ZFIN:ZDB-ANAT-070308-31 is_a: ZFA:0009039 ! squamous epithelial cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009042 name: stratified epithelial cell namespace: zebrafish_anatomy synonym: "stratified epithelial cells" EXACT PLURAL [] xref: CL:0000079 xref: TAO:0009042 xref: ZFIN:ZDB-ANAT-070308-32 is_a: ZFA:0009034 ! epithelial cell relationship: develops_from ZFA:0009180 ! stratified epithelial stem cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009043 name: circulating cell namespace: zebrafish_anatomy def: "A cell which moves among different tissues of the body, via blood, lymph, or other medium." [CL:curator] synonym: "circulating cells" EXACT PLURAL [] xref: CL:0000080 xref: TAO:0009043 xref: ZFIN:ZDB-ANAT-070308-33 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009044 name: blood cell namespace: zebrafish_anatomy def: "A cell found predominately in the blood." [CL:curator] synonym: "blood cells" EXACT PLURAL [] xref: CL:0000081 xref: TAO:0009044 xref: ZFIN:ZDB-ANAT-070308-34 is_a: ZFA:0009043 ! circulating cell relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000007 ! blood relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0009045 name: epithelial cell of pancreas namespace: zebrafish_anatomy synonym: "epithelial cells of pancreas" EXACT PLURAL [] xref: CL:0000083 xref: TAO:0009045 xref: ZFIN:ZDB-ANAT-070308-35 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009139 ! endodermal cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009046 name: T cell namespace: zebrafish_anatomy def: "A type of lymphocyte whose defining characteristic is the expression of a T cell receptor complex." [ZFIN:ZDB-PUB-070221-3] synonym: "T lymphocyte" EXACT [] synonym: "T-cell" EXACT [] synonym: "T-lymphocyte" EXACT [] xref: CL:0000084 xref: TAO:0009046 xref: ZFIN:ZDB-ANAT-050915-145 is_a: ZFA:0009250 ! lymphocyte relationship: develops_from ZFA:0009350 ! pro-T cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009047 name: osteoclast namespace: zebrafish_anatomy def: "A specialized phagocytic cell associated with the absorption and removal of the mineralized matrix of bone tissue, which typically differentiates from monocytes." [CL:curator, ZFIN:ZDB-PUB-070221-3] comment: Morphology: Highly vesicular; markers: Surface: RANK, cFMS (MCSF receptor); Secreted: cathepsin K and TRAP (tartate resistant acid phosphatase); transcription factors: PU.1, cFOS, MITF, NFkB (p52); role or process: tissue remodelling: bone resorption; lineage: hematopoietic, myeloid. synonym: "chondroclast" RELATED [] xref: CL:0000092 xref: TAO:0009047 xref: ZFIN:ZDB-ANAT-070308-36 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009265 ! monocyte relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009048 name: granulocyte namespace: zebrafish_anatomy def: "A leukocyte with abundant granules in the cytoplasm." [CL:curator] synonym: "granulocytes" EXACT PLURAL [] xref: CL:0000094 xref: TAO:0009048 xref: ZFIN:ZDB-ANAT-060816-79 is_a: ZFA:0009326 ! myeloid leukocyte relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009049 name: mature neutrophil namespace: zebrafish_anatomy def: "A fully differentiated neutrophil, a granular leukocyte having a nucleus with three to five lobes connected by slender threads of chromatin, and cytoplasm containing fine inconspicuous granules and stainable by neutral dyes." [CL:curator] synonym: "mature neutrocyte" EXACT [] synonym: "mature neutrophil leucocyte" EXACT [] synonym: "mature neutrophil leukocyte" EXACT [] synonym: "mature neutrophilic leucocyte" EXACT [] synonym: "mature neutrophilic leukocyte" EXACT [] synonym: "PMN" EXACT [] synonym: "poly" RELATED [] synonym: "polymorphonuclear leucocyte" RELATED [] synonym: "polymorphonuclear leukocyte" RELATED [] synonym: "polymorphonuclear neutrophil" EXACT [] synonym: "polynuclear neutrophilic leucocyte" EXACT [] synonym: "polynuclear neutrophilic leukocyte" EXACT [] xref: CL:0000096 xref: TAO:0009049 xref: ZFIN:ZDB-ANAT-060331-81 is_a: ZFA:0009327 ! neutrophil relationship: develops_from ZFA:0009254 ! band form neutrophil relationship: develops_from ZFA:0009328 ! immature neutrophil relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009050 name: sensory epithelial cell namespace: zebrafish_anatomy synonym: "sensory epithelial cells" EXACT PLURAL [] xref: CL:0000098 xref: TAO:0009050 xref: ZFIN:ZDB-ANAT-070308-37 is_a: ZFA:0009038 ! columnar/cuboidal epithelial cell relationship: develops_from ZFA:0009306 ! neuroepithelial cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009051 name: interneuron namespace: zebrafish_anatomy def: "Most generally any neuron which is not motor or sensory. Interneurons may also refer to neurons whose axons remain within a particular brain region as contrasted with projection neurons which have axons projecting to other brain regions." [CL:curator] synonym: "interneurons" EXACT PLURAL [] xref: CL:0000099 xref: TAO:0009051 xref: ZFIN:ZDB-ANAT-070308-38 is_a: ZFA:0009248 ! neuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009052 name: motor neuron namespace: zebrafish_anatomy def: "An efferent neuron that passes from the central nervous system or a ganglion toward or to a muscle and conducts an impulse that causes movement." [CL:curator] synonym: "motoneuron" EXACT [] xref: CL:0000100 xref: TAO:0009052 xref: ZFIN:ZDB-ANAT-070308-39 is_a: ZFA:0009239 ! efferent neuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009053 name: sensory neuron namespace: zebrafish_anatomy alt_id: ZFA:0000432 xref: CL:0000101 xref: TAO:0009053 xref: ZFIN:ZDB-ANAT-011113-357 is_a: ZFA:0009238 ! afferent neuron relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000047 ! peripheral olfactory organ relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0009054 name: polymodal neuron namespace: zebrafish_anatomy synonym: "polymodal neurons" EXACT PLURAL [] xref: CL:0000102 xref: TAO:0009054 xref: ZFIN:ZDB-ANAT-070308-40 is_a: ZFA:0009248 ! neuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009055 name: bipolar neuron namespace: zebrafish_anatomy def: "A type of interneuron that has two neurites, usually an axon and a dendrite, extending from opposite poles of an ovoid cell body." [ZFIN:ZDB-PUB-070221-4] synonym: "bipolar neurons" EXACT PLURAL [] xref: CL:0000103 xref: TAO:0009055 xref: ZFIN:ZDB-ANAT-051116-45 is_a: ZFA:0009051 ! interneuron relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000119 ! retinal inner nuclear layer relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009056 name: multipolar neuron namespace: zebrafish_anatomy synonym: "multipolar neurons" EXACT PLURAL [] xref: CL:0000104 xref: TAO:0009056 xref: ZFIN:ZDB-ANAT-070308-41 is_a: ZFA:0009248 ! neuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009057 name: pseudounipolar neuron namespace: zebrafish_anatomy synonym: "pseudounipolar neurons" EXACT PLURAL [] xref: CL:0000105 xref: TAO:0009057 xref: ZFIN:ZDB-ANAT-070308-42 is_a: ZFA:0009248 ! neuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009058 name: unipolar neuron namespace: zebrafish_anatomy synonym: "unipolar neurons" EXACT PLURAL [] xref: CL:0000106 xref: TAO:0009058 xref: ZFIN:ZDB-ANAT-070308-43 is_a: ZFA:0009248 ! neuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009059 name: autonomic neuron namespace: zebrafish_anatomy synonym: "autonomic neurons" EXACT PLURAL [] xref: CL:0000107 xref: TAO:0009059 xref: ZFIN:ZDB-ANAT-070308-44 is_a: ZFA:0009009 ! neuron neural crest derived is_a: ZFA:0009248 ! neuron relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001574 ! autonomic nervous system relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009060 name: cholinergic neuron namespace: zebrafish_anatomy synonym: "cholinergic neurons" EXACT PLURAL [] xref: CL:0000108 xref: TAO:0009060 xref: ZFIN:ZDB-ANAT-070308-45 is_a: ZFA:0009059 ! autonomic neuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009061 name: adrenergic neuron namespace: zebrafish_anatomy synonym: "adrenergic neurons" EXACT PLURAL [] xref: CL:0000109 xref: TAO:0009061 xref: ZFIN:ZDB-ANAT-070308-46 is_a: ZFA:0009059 ! autonomic neuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009062 name: peptidergic neuron namespace: zebrafish_anatomy synonym: "peptidergic neurons" EXACT PLURAL [] xref: CL:0000110 xref: TAO:0009062 xref: ZFIN:ZDB-ANAT-070308-47 is_a: ZFA:0009059 ! autonomic neuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009063 name: peripheral neuron namespace: zebrafish_anatomy synonym: "peripheral neurons" EXACT PLURAL [] xref: CL:0000111 xref: TAO:0009063 xref: ZFIN:ZDB-ANAT-070308-48 is_a: ZFA:0009009 ! neuron neural crest derived is_a: ZFA:0009248 ! neuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009064 name: mononuclear phagocyte namespace: zebrafish_anatomy def: "A vertebrate phagocyte with a single nucleus." [ZFIN:ZDB-PUB-070221-3] synonym: "mononuclear phagocytes" EXACT PLURAL [] xref: CL:0000113 xref: TAO:0009064 xref: ZFIN:ZDB-ANAT-060331-84 is_a: ZFA:0009357 ! mononuclear cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009065 name: endothelial cell namespace: zebrafish_anatomy synonym: "endothelial cells" EXACT PLURAL [] xref: CL:0000115 xref: TAO:0009065 xref: ZFIN:ZDB-ANAT-070308-49 is_a: ZFA:0009130 ! lining cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009066 name: pioneer neuron namespace: zebrafish_anatomy alt_id: ZFA:0000409 def: "Pioneer neurons establish a pathway in the developing central nervous system and then undergo programmed cell death once the adult axons, which follow them, have made connections with the target site. Thus, they are a transient cell type involved in axon guidance." [ZFIN:ZDB-PUB-070131-1] xref: CL:0000116 xref: TAO:0009066 xref: ZFIN:ZDB-ANAT-011113-334 is_a: ZFA:0009248 ! neuron relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0000048 ! olfactory placode relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0009067 name: CNS neuron (sensu Vertebrata) namespace: zebrafish_anatomy synonym: "CNS neurons (sensu Vertebrata)" EXACT PLURAL [] xref: CL:0000117 xref: TAO:0009067 xref: ZFIN:ZDB-ANAT-070308-50 is_a: ZFA:0009248 ! neuron relationship: develops_from ZFA:0009168 ! neuroblast (sensu Vertebrata) relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009068 name: basket cell namespace: zebrafish_anatomy synonym: "basket cells" EXACT PLURAL [] xref: CL:0000118 xref: TAO:0009068 xref: ZFIN:ZDB-ANAT-070308-51 is_a: ZFA:0009067 ! CNS neuron (sensu Vertebrata) relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009069 name: Golgi cell namespace: zebrafish_anatomy synonym: "Golgi cells" EXACT PLURAL [] xref: CL:0000119 xref: TAO:0009069 xref: ZFIN:ZDB-ANAT-070308-52 is_a: ZFA:0009067 ! CNS neuron (sensu Vertebrata) relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009070 name: granule cell namespace: zebrafish_anatomy synonym: "granule cells" EXACT PLURAL [] xref: CL:0000120 xref: TAO:0009070 xref: ZFIN:ZDB-ANAT-070308-53 is_a: ZFA:0009067 ! CNS neuron (sensu Vertebrata) relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000008 ! brain relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009071 name: Purkinje cell namespace: zebrafish_anatomy def: "The output neuron of the cerebellar cortex." [CL:curator] synonym: "Purkinje cells" EXACT PLURAL [] xref: CL:0000121 xref: TAO:0009071 xref: ZFIN:ZDB-ANAT-070308-54 is_a: ZFA:0009067 ! CNS neuron (sensu Vertebrata) is_a: ZFA:0009239 ! efferent neuron relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001706 ! Purkinje cell layer corpus cerebelli relationship: part_of ZFA:0001709 ! Purkinje cell layer valvula cerebelli relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009072 name: stellate cell namespace: zebrafish_anatomy synonym: "stellate cells" EXACT PLURAL [] xref: CL:0000122 xref: TAO:0009072 xref: ZFIN:ZDB-ANAT-070308-55 is_a: ZFA:0009067 ! CNS neuron (sensu Vertebrata) relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009073 name: glial cell namespace: zebrafish_anatomy alt_id: ZFA:0000025 def: "A non-neuronal cell of the nervous system. They not only provide physical support, but also respond to injury, regulate the ionic and chemical composition of the extracellular milieu. Guide neuronal migration during development, and exchange metabolites with neurons." [CL:curator] synonym: "neuroglia" EXACT [] xref: CL:0000125 xref: TAO:0009073 xref: ZFIN:ZDB-ANAT-010921-436 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009010 ! glioblast relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000396 ! nervous system relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0009074 name: macroglial cell namespace: zebrafish_anatomy synonym: "macroglial cells" EXACT PLURAL [] xref: CL:0000126 xref: TAO:0009074 xref: ZFIN:ZDB-ANAT-070308-56 is_a: ZFA:0009147 ! glial cell (sensu Vertebrata) relationship: develops_from ZFA:0009169 ! glioblast (sensu Vertebrata) relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009075 name: astrocyte namespace: zebrafish_anatomy def: "A class of large neuroglial (macroglial) cells in the central nervous system - the largest and most numerous neuroglial cells in the brain and spinal cord. Astrocytes (from 'star' cells) are irregularly shaped with many long processes, including those with 'end feet' which form the glial (limiting) membrane and directly and indirectly contribute to the blood-brain barrier. They regulate the extracellular ionic and chemical environment, and 'reactive astrocytes' (along with microglia) respond to injury." [CL:curator] synonym: "astrocytes" EXACT PLURAL [] xref: CL:0000127 xref: TAO:0009075 xref: ZFIN:ZDB-ANAT-050915-160 is_a: ZFA:0009074 ! macroglial cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009076 name: oligodendrocyte namespace: zebrafish_anatomy def: "A class of large neuroglial (macroglial) cells in the central nervous system. Form the insulating myelin sheath of axons in the central nervous system." [CL:curator] synonym: "oligodendroglia" RELATED [] xref: CL:0000128 xref: TAO:0009076 xref: ZFIN:ZDB-ANAT-060131-75 is_a: ZFA:0009074 ! macroglial cell relationship: develops_from ZFA:0009169 ! glioblast (sensu Vertebrata) relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009077 name: microglial cell namespace: zebrafish_anatomy def: "A central nervous system macrophage found in the parenchyma of the central nervous system." [ZFIN:ZDB-PUB-070221-1] synonym: "microglia" EXACT [] xref: CL:0000129 xref: TAO:0009077 xref: ZFIN:ZDB-ANAT-070308-57 is_a: ZFA:0009141 ! macrophage relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009078 name: gut endothelial cell namespace: zebrafish_anatomy synonym: "gut endothelial cells" EXACT PLURAL [] xref: CL:0000131 xref: TAO:0009078 xref: ZFIN:ZDB-ANAT-070308-58 is_a: ZFA:0009038 ! columnar/cuboidal epithelial cell is_a: ZFA:0009065 ! endothelial cell relationship: develops_from ZFA:0009139 ! endodermal cell relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000112 ! gut relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0009079 name: corneal endothelial cell namespace: zebrafish_anatomy def: "Cell of the single layer of large flattened cells covering the surface of the cornea." [CL:curator] synonym: "corneal endothelial cells" EXACT PLURAL [] xref: CL:0000132 xref: TAO:0009079 xref: ZFIN:ZDB-ANAT-070308-59 is_a: ZFA:0009039 ! squamous epithelial cell is_a: ZFA:0009065 ! endothelial cell relationship: develops_from ZFA:0009003 ! cranial neural crest cell relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001687 ! corneal endothelium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009080 name: neurectodermal cell namespace: zebrafish_anatomy synonym: "neurectoderm cell" EXACT [] xref: CL:0000133 xref: TAO:0009080 xref: ZFIN:ZDB-ANAT-070308-60 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009137 ! ectodermal cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009081 name: mesenchymal cell namespace: zebrafish_anatomy def: "A cell that normally gives rise to other cells that are organized as three-dimensional masses, rather than sheets." [CL:curator] synonym: "mesenchymal cells" EXACT PLURAL [] xref: CL:0000134 xref: TAO:0009081 xref: ZFIN:ZDB-ANAT-070308-61 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009138 ! mesodermal cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009082 name: fat cell namespace: zebrafish_anatomy def: "A fat-storing cell found mostly in the abdominal cavity and subcutaneous tissue of mammals. Fat is usually stored in the form of tryglycerides." [CL:curator] synonym: "adipocyte" EXACT [] xref: CL:0000136 xref: TAO:0009082 xref: ZFIN:ZDB-ANAT-070308-62 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009026 ! fibroblast relationship: develops_from ZFA:0009081 ! mesenchymal cell relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005345 ! adipose tissue relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009083 name: osteocyte namespace: zebrafish_anatomy def: "A mature osteoblast that has become embedded in the bone matrix. They occupy a small cavity, called lacuna, in the matrix and are connected to adjacent osteocytes via protoplasmic projections called canaliculi." [CL:curator] synonym: "osteocytes" EXACT PLURAL [] xref: CL:0000137 xref: TAO:0009083 xref: ZFIN:ZDB-ANAT-070308-63 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009031 ! osteoblast relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009084 name: chondrocyte namespace: zebrafish_anatomy def: "Polymorphic cell that form cartilage." [CL:curator] synonym: "chondrocytes" EXACT PLURAL [] xref: CL:0000138 xref: TAO:0009084 xref: ZFIN:ZDB-ANAT-050915-154 is_a: ZFA:0009093 ! GAG secreting cell is_a: ZFA:0009287 ! collagen secreting cell relationship: develops_from ZFA:0009027 ! chondroblast relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009085 name: amelocyte namespace: zebrafish_anatomy synonym: "amelocytes" EXACT PLURAL [] xref: CL:0000139 xref: TAO:0009085 xref: ZFIN:ZDB-ANAT-070308-64 is_a: ZFA:0009089 ! simple columnar epithelial cell relationship: develops_from ZFA:0009028 ! ameloblast relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009086 name: odontocyte namespace: zebrafish_anatomy synonym: "odontocytes" EXACT PLURAL [] xref: CL:0000140 xref: TAO:0009086 xref: ZFIN:ZDB-ANAT-070308-65 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009029 ! odontoblast relationship: develops_from ZFA:0009081 ! mesenchymal cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009087 name: cementocyte namespace: zebrafish_anatomy def: "An osteocytelike cell with numerous processes, trapped in a lacuna in the cement of the tooth." [ISBN:0781733901] synonym: "cementocytes" EXACT PLURAL [] xref: CL:0000141 xref: TAO:0009087 xref: ZFIN:ZDB-ANAT-070308-66 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009030 ! cementoblast relationship: develops_from ZFA:0009081 ! mesenchymal cell relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000694 ! ceratobranchial 5 tooth relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0009088 name: professional antigen presenting cell namespace: zebrafish_anatomy def: "A cell capable of processing and presenting lipid and protein antigens to T cells in order to initiate an immune response." [ZFIN:ZDB-PUB-070221-3] comment: Note change of name; nearly all somatic cells can present antigens to T cells via MHC Class I complexes leading to effector responses, but professional antigen presenting cells constitutively express MHC Class II as well as constimulatory molecules, and thus can initiate immune responses via T cells. synonym: "APC" EXACT [] xref: CL:0000145 xref: TAO:0009088 xref: ZFIN:ZDB-ANAT-070308-67 is_a: ZFA:0009309 ! leukocyte relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009089 name: simple columnar epithelial cell namespace: zebrafish_anatomy synonym: "simple columnar epithelial cells" EXACT PLURAL [] xref: CL:0000146 xref: TAO:0009089 xref: ZFIN:ZDB-ANAT-070308-68 is_a: ZFA:0009038 ! columnar/cuboidal epithelial cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009090 name: pigment cell namespace: zebrafish_anatomy alt_id: ZFA:0000057 synonym: "chromatocyte" EXACT [] synonym: "chromatophore" EXACT [] xref: CL:0000147 xref: TAO:0009090 xref: ZFIN:ZDB-ANAT-010921-474 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0009091 name: melanocyte namespace: zebrafish_anatomy alt_id: ZFA:0001091 def: "A pigment cell derived from the neural crest. Contains melanin-filled pigment granules, which gives a brown to black appearance." [CL:curator] synonym: "melanophore" EXACT [] xref: CL:0000148 xref: TAO:0009091 xref: ZFIN:ZDB-ANAT-040708-2 is_a: ZFA:0009090 ! pigment cell relationship: develops_from ZFA:0009249 ! melanoblast relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000368 ! integument relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0009092 name: exocrine cell namespace: zebrafish_anatomy def: "A cell of an exocrine gland, i.e. a gland that discharges its secretion via a duct." [ZFIN:ZDB-PUB-070221-5] synonym: "exocrine cells" EXACT PLURAL [] xref: CL:0000152 xref: TAO:0009092 xref: ZFIN:ZDB-ANAT-070308-69 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009093 name: GAG secreting cell namespace: zebrafish_anatomy synonym: "hyaluronic acid secreting cell" EXACT [] xref: CL:0000153 xref: TAO:0009093 xref: ZFIN:ZDB-ANAT-070308-70 is_a: ZFA:0009162 ! extracellular matrix secreting cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009094 name: goblet cell namespace: zebrafish_anatomy def: "A cell of the epithelial lining that produce and secrete mucins." [CL:curator] synonym: "chalice cell" EXACT [] xref: CL:0000160 xref: TAO:0009094 xref: ZFIN:ZDB-ANAT-070308-71 is_a: ZFA:0009159 ! mucus secreting cell relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005124 ! intestinal epithelium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009095 name: acid secreting cell namespace: zebrafish_anatomy synonym: "acid secreting cells" EXACT PLURAL [] xref: CL:0000161 xref: TAO:0009095 xref: ZFIN:ZDB-ANAT-070308-72 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009096 name: endocrine cell namespace: zebrafish_anatomy def: "A cell of an endocrine gland, ductless glands that secrete substances which are released directly into the circulation and which influence metabolism and other body functions." [CL:curator] synonym: "endocrine cells" EXACT PLURAL [] xref: CL:0000163 xref: TAO:0009096 xref: ZFIN:ZDB-ANAT-060816-68 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001158 ! endocrine system relationship: start ZFS:0000000 ! Unknown relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0009097 name: enteroendocrine cell namespace: zebrafish_anatomy def: "An endocrine cell that is located in the epithelium of the gastrointestinal tract." [SANBI:curator] synonym: "enteroendocrine cells" EXACT PLURAL [] xref: CL:0000164 xref: TAO:0009097 xref: ZFIN:ZDB-ANAT-070308-73 is_a: ZFA:0009096 ! endocrine cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009098 name: neuroendocrine cell namespace: zebrafish_anatomy def: "A neuron that has the specialized function to produce and secrete hormones, and that constitutes, in whole or in part, an endocrine organ or system." [CL:curator] synonym: "neurosecretory cell" EXACT [] xref: CL:0000165 xref: TAO:0009098 xref: ZFIN:ZDB-ANAT-070308-74 is_a: ZFA:0009096 ! endocrine cell is_a: ZFA:0009190 ! electrically responsive cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009099 name: chromaffin cell namespace: zebrafish_anatomy def: "A cell that stores epinephrine secretory vesicles. During times of stress, the nervous system signals the vesicles to secrete their hormonal content. Their name derives from their ability to stain a brownish color with chromic salts. Characteristically, they are located in the adrenal medulla and paraganglia of the sympathetic nervous system." [CL:curator] synonym: "phaeochromocyte" EXACT [] xref: CL:0000166 xref: TAO:0009099 xref: ZFIN:ZDB-ANAT-050915-151 is_a: ZFA:0009098 ! neuroendocrine cell relationship: develops_from ZFA:0009165 ! neural crest cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009100 name: peptide hormone secreting cell namespace: zebrafish_anatomy synonym: "peptide hormone secreting cells" EXACT PLURAL [] xref: CL:0000167 xref: TAO:0009100 xref: ZFIN:ZDB-ANAT-060816-69 is_a: ZFA:0009096 ! endocrine cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009101 name: insulin secreting cell namespace: zebrafish_anatomy synonym: "insulin secreting cells" EXACT PLURAL [] xref: CL:0000168 xref: TAO:0009101 xref: ZFIN:ZDB-ANAT-070308-75 is_a: ZFA:0009100 ! peptide hormone secreting cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009102 name: pancreatic B cell namespace: zebrafish_anatomy synonym: "beta cell" EXACT [] xref: CL:0000169 xref: TAO:0009102 xref: ZFIN:ZDB-ANAT-070308-76 is_a: ZFA:0009101 ! insulin secreting cell relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001371 ! pancreatic system relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009103 name: glucagon secreting cell namespace: zebrafish_anatomy synonym: "glucagon secreting cells" EXACT PLURAL [] xref: CL:0000170 xref: TAO:0009103 xref: ZFIN:ZDB-ANAT-070308-77 is_a: ZFA:0009100 ! peptide hormone secreting cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009104 name: pancreatic A cell namespace: zebrafish_anatomy synonym: "alpha cell" EXACT [] xref: CL:0000171 xref: TAO:0009104 xref: ZFIN:ZDB-ANAT-070308-78 is_a: ZFA:0009103 ! glucagon secreting cell relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001371 ! pancreatic system relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009105 name: somatostatin secreting cell namespace: zebrafish_anatomy synonym: "somatostatin secreting cells" EXACT PLURAL [] xref: CL:0000172 xref: TAO:0009105 xref: ZFIN:ZDB-ANAT-070308-79 is_a: ZFA:0009100 ! peptide hormone secreting cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009106 name: steroid hormone secreting cell namespace: zebrafish_anatomy synonym: "steroid hormone secreting cells" EXACT PLURAL [] xref: CL:0000174 xref: TAO:0009106 xref: ZFIN:ZDB-ANAT-070308-80 is_a: ZFA:0009096 ! endocrine cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009107 name: testosterone secreting cell namespace: zebrafish_anatomy synonym: "testosterone secreting cells" EXACT PLURAL [] xref: CL:0000177 xref: TAO:0009107 xref: ZFIN:ZDB-ANAT-070308-81 is_a: ZFA:0009106 ! steroid hormone secreting cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009108 name: Leydig cell namespace: zebrafish_anatomy synonym: "interstitial cell" EXACT [] xref: CL:0000178 xref: TAO:0009108 xref: ZFIN:ZDB-ANAT-070308-82 is_a: ZFA:0009107 ! testosterone secreting cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009109 name: progesterone secreting cell namespace: zebrafish_anatomy synonym: "progesterone secreting cells" EXACT PLURAL [] xref: CL:0000179 xref: TAO:0009109 xref: ZFIN:ZDB-ANAT-070308-83 is_a: ZFA:0009106 ! steroid hormone secreting cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009110 name: estradiol secreting cell namespace: zebrafish_anatomy synonym: "estradiol secreting cells" EXACT PLURAL [] xref: CL:0000180 xref: TAO:0009110 xref: ZFIN:ZDB-ANAT-070308-84 is_a: ZFA:0009106 ! steroid hormone secreting cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009111 name: hepatocyte namespace: zebrafish_anatomy def: "The main structural component of the liver. They are specialized epithelial cells that are organized into interconnected plates called lobules." [CL:curator] synonym: "hepatocytes" EXACT PLURAL [] xref: CL:0000182 xref: TAO:0009111 xref: ZFIN:ZDB-ANAT-070308-85 is_a: ZFA:0009034 ! epithelial cell relationship: develops_from ZFA:0009081 ! mesenchymal cell relationship: develops_from ZFA:0009139 ! endodermal cell relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000123 ! liver relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009112 name: pericyte namespace: zebrafish_anatomy def: "A slender, contractile, mesenchymal-like cell found in close association with capillary walls. They are relatively undifferentiated and may become fibroblasts, macrophages, or smooth muscle cells. (From Stedman, 26th ed)." [CL:curator] synonym: "pericytes" EXACT PLURAL [] xref: CL:0000184 xref: TAO:0009112 xref: ZFIN:ZDB-ANAT-070308-86 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009113 name: myoepithelial cell namespace: zebrafish_anatomy synonym: "myoepithelial cells" EXACT PLURAL [] xref: CL:0000185 xref: TAO:0009113 xref: ZFIN:ZDB-ANAT-070308-87 is_a: ZFA:0009038 ! columnar/cuboidal epithelial cell relationship: develops_from ZFA:0009138 ! mesodermal cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009114 name: muscle cell namespace: zebrafish_anatomy def: "A mature contractile cell, commonly known as a myocyte, that forms one of three kinds of muscle." [CL:curator] synonym: "myocyte" EXACT [] xref: CL:0000187 xref: TAO:0009114 xref: ZFIN:ZDB-ANAT-050915-158 is_a: ZFA:0009190 ! electrically responsive cell relationship: develops_from ZFA:0009025 ! myoblast relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005145 ! muscle relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0009115 name: skeletal muscle cell namespace: zebrafish_anatomy synonym: "striated muscle cell" EXACT [] xref: CL:0000188 xref: TAO:0009115 xref: ZFIN:ZDB-ANAT-050915-159 is_a: ZFA:0009114 ! muscle cell relationship: develops_from ZFA:0009236 ! skeletal muscle myoblast relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005277 ! skeletal muscle relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0009116 name: slow muscle cell namespace: zebrafish_anatomy alt_id: ZFA:0001087 synonym: "red muscle cell" EXACT [] synonym: "slow muscle fiber" EXACT [ISBN:0815316208] xref: CL:0000189 xref: TAO:0009116 xref: ZFIN:ZDB-ANAT-031211-15 is_a: ZFA:0009115 ! skeletal muscle cell relationship: develops_from ZFA:0001056 ! myotome relationship: develops_from ZFA:0001373 ! migratory slow muscle precursor cell relationship: develops_from ZFA:0009368 ! slow muscle myoblast relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000023 ! Segmentation:1-4 somites relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0009117 name: fast muscle cell namespace: zebrafish_anatomy alt_id: ZFA:0001088 synonym: "white muscle cell" EXACT [] xref: CL:0000190 xref: TAO:0009117 xref: ZFIN:ZDB-ANAT-031211-3 is_a: ZFA:0009115 ! skeletal muscle cell relationship: develops_from ZFA:0001056 ! myotome relationship: develops_from ZFA:0009369 ! fast muscle myoblast relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0009118 name: smooth muscle cell namespace: zebrafish_anatomy def: "A non-striated, elongated, spindle-shaped cell found lining the digestive tract, uterus, and blood vessels. They develop from specialized myoblasts (smooth muscle myoblast)." [CL:curator] synonym: "non-striated muscle cell" EXACT [] xref: CL:0000192 xref: TAO:0009118 xref: ZFIN:ZDB-ANAT-070308-88 is_a: ZFA:0009114 ! muscle cell relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005274 ! smooth muscle relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009119 name: pain receptor cell namespace: zebrafish_anatomy def: "The peripheral receptor for pain. Includes receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli. All mammalian nociceptors are free nerve endings." [CL:curator] synonym: "nociceptor" EXACT [] synonym: "nocireceptor" EXACT [] xref: CL:0000198 xref: TAO:0009119 xref: ZFIN:ZDB-ANAT-070308-89 is_a: ZFA:0009001 ! receptor cell (sensu Animalia) relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009120 name: mechanoreceptor cell namespace: zebrafish_anatomy def: "A cell specialized to transduce mechanical stimuli and relay that information centrally in the nervous system." [CL:curator] synonym: "mechanoreceptor cells" EXACT PLURAL [] xref: CL:0000199 xref: TAO:0009120 xref: ZFIN:ZDB-ANAT-070308-90 is_a: ZFA:0009001 ! receptor cell (sensu Animalia) relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009121 name: auditory receptor cell namespace: zebrafish_anatomy synonym: "auditory receptor cells" EXACT PLURAL [] xref: CL:0000201 xref: TAO:0009121 xref: ZFIN:ZDB-ANAT-070308-91 is_a: ZFA:0009001 ! receptor cell (sensu Animalia) relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009122 name: auditory hair cell namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-512 is_obsolete: true [Term] id: ZFA:0009123 name: thermoreceptor cell namespace: zebrafish_anatomy def: "A cellular receptor which mediates the sense of temperature. Thermoreceptors in vertebrates are mostly located under the skin. In mammals there are separate types of thermoreceptors for cold and for warmth and pain receptor cells which detect cold or heat extreme enough to cause pain." [CL:curator] synonym: "thermoreceptor cells" EXACT PLURAL [] xref: CL:0000205 xref: TAO:0009123 xref: ZFIN:ZDB-ANAT-070308-92 is_a: ZFA:0009001 ! receptor cell (sensu Animalia) relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009124 name: chemoreceptor cell namespace: zebrafish_anatomy def: "A cell specialized to detect chemical substances and relay that information centrally in the nervous system. Chemoreceptors may monitor external stimuli, as in taste and olfaction, or internal stimuli, such as the concentrations of oxygen and carbon dioxide in the blood." [CL:curator] synonym: "chemoreceptor cells" EXACT PLURAL [] xref: CL:0000206 xref: TAO:0009124 xref: ZFIN:ZDB-ANAT-070308-93 is_a: ZFA:0009001 ! receptor cell (sensu Animalia) relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009125 name: olfactory receptor cell namespace: zebrafish_anatomy synonym: "olfactory receptor neuron" EXACT [] synonym: "olfactory sensory neuron" EXACT [] synonym: "Schultze's cell" EXACT [] xref: CL:0000207 xref: TAO:0009125 xref: ZFIN:ZDB-ANAT-070308-94 is_a: ZFA:0009124 ! chemoreceptor cell relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001149 ! olfactory system relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0009126 name: taste receptor cell namespace: zebrafish_anatomy synonym: "taste receptor cells" EXACT PLURAL [] xref: CL:0000209 xref: TAO:0009126 xref: ZFIN:ZDB-ANAT-070308-95 is_a: ZFA:0009124 ! chemoreceptor cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009127 name: photoreceptor cell namespace: zebrafish_anatomy def: "A cell specialized to detect and transduce light." [CL:curator] synonym: "photoreceptor cells" EXACT PLURAL [] xref: CL:0000210 xref: TAO:0009127 xref: ZFIN:ZDB-ANAT-070308-96 is_a: ZFA:0009001 ! receptor cell (sensu Animalia) relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009128 name: electrically active cell namespace: zebrafish_anatomy def: "A cell whose function is determined by the generation or the reception of an electric signal." [CL:curator] synonym: "electrically active cells" EXACT PLURAL [] xref: CL:0000211 xref: TAO:0009128 xref: ZFIN:ZDB-ANAT-070308-97 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009129 name: absorptive cell namespace: zebrafish_anatomy def: "A cell that takes up and metabolizes substances." [CL:curator] synonym: "absorptive cells" EXACT PLURAL [] xref: CL:0000212 xref: TAO:0009129 xref: ZFIN:ZDB-ANAT-070308-98 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009130 name: lining cell namespace: zebrafish_anatomy def: "A cell within an epithelial cell sheet whose main function is to act as an internal or external covering for a tissue or an organism." [CL:curator] synonym: "boundary cell" EXACT [] xref: CL:0000213 xref: TAO:0009130 xref: ZFIN:ZDB-ANAT-070308-99 is_a: ZFA:0009132 ! barrier cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009131 name: synovial cell namespace: zebrafish_anatomy synonym: "synovial cells" EXACT PLURAL [] xref: CL:0000214 xref: TAO:0009131 xref: ZFIN:ZDB-ANAT-070308-100 is_a: ZFA:0009093 ! GAG secreting cell is_a: ZFA:0009130 ! lining cell relationship: develops_from ZFA:0009081 ! mesenchymal cell relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005153 ! synovial joint relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009132 name: barrier cell namespace: zebrafish_anatomy def: "A cell whose primary function is to prevent the transport of stuff across compartments." [CL:curator] synonym: "barrier cells" EXACT PLURAL [] xref: CL:0000215 xref: TAO:0009132 xref: ZFIN:ZDB-ANAT-070308-101 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009133 name: Sertoli cell namespace: zebrafish_anatomy def: "A supporting cell projecting inward from the basement membrane of seminiferous tubules. They surround and nourish the developing male germ cells and secrete androgen binding protein. Their tight junctions with the spermatogonia and spermatocytes provide a blood-testis barrier." [CL:curator] synonym: "Sertoli cells" EXACT PLURAL [] xref: CL:0000216 xref: TAO:0009133 xref: ZFIN:ZDB-ANAT-070308-102 is_a: ZFA:0009132 ! barrier cell relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000598 ! testis relationship: start ZFS:0000041 ! Larval:Days 21-29 [Term] id: ZFA:0009134 name: insulating cell namespace: zebrafish_anatomy synonym: "insulating cells" EXACT PLURAL [] xref: CL:0000217 xref: TAO:0009134 xref: ZFIN:ZDB-ANAT-070308-103 is_a: ZFA:0009132 ! barrier cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009135 name: Schwann cell namespace: zebrafish_anatomy def: "A neuroglial cell of the peripheral nervous system which forms the insulating myelin sheaths of peripheral axons." [CL:curator] synonym: "Schwann cells" EXACT PLURAL [] xref: CL:0000218 xref: TAO:0009135 xref: ZFIN:ZDB-ANAT-070308-104 is_a: ZFA:0009134 ! insulating cell is_a: ZFA:0009147 ! glial cell (sensu Vertebrata) is_a: ZFA:0009163 ! myelin accumulating cell relationship: develops_from ZFA:0001725 ! immature Schwann cell relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000142 ! peripheral nervous system relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0009136 name: motile cell namespace: zebrafish_anatomy def: "A cell that moves by its own activities." [CL:curator] synonym: "motile cells" EXACT PLURAL [] xref: CL:0000219 xref: TAO:0009136 xref: ZFIN:ZDB-ANAT-070308-105 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009137 name: ectodermal cell namespace: zebrafish_anatomy def: "A cell of the outer of the three germ layers of the embryo." [CL:curator] synonym: "ectoderm cell" EXACT [] xref: CL:0000221 xref: TAO:0009137 xref: ZFIN:ZDB-ANAT-070308-106 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0000016 ! ectoderm relationship: start ZFS:0000020 ! Gastrula:75%-epiboly [Term] id: ZFA:0009138 name: mesodermal cell namespace: zebrafish_anatomy def: "A cell of the middle germ layer of the embryo." [CL:curator] synonym: "mesoblast" EXACT [] synonym: "mesoderm cell" EXACT [] xref: CL:0000222 xref: TAO:0009138 xref: ZFIN:ZDB-ANAT-070308-107 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0000041 ! mesoderm relationship: start ZFS:0000020 ! Gastrula:75%-epiboly [Term] id: ZFA:0009139 name: endodermal cell namespace: zebrafish_anatomy def: "A cell of the inner of the three germ layers of the embryo." [CL:curator] synonym: "endoderm cell" EXACT [] xref: CL:0000223 xref: TAO:0009139 xref: ZFIN:ZDB-ANAT-070308-108 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000035 ! Larval:Protruding-mouth relationship: part_of ZFA:0000017 ! endoderm relationship: start ZFS:0000020 ! Gastrula:75%-epiboly [Term] id: ZFA:0009140 name: phagocyte namespace: zebrafish_anatomy def: "Any cell capable of ingesting particulate matter via phagocytosis." [ZFIN:ZDB-PUB-070221-1] synonym: "phagocytes" EXACT PLURAL [] xref: CL:0000234 xref: TAO:0009140 xref: ZFIN:ZDB-ANAT-070308-109 is_a: ZFA:0009136 ! motile cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009141 name: macrophage namespace: zebrafish_anatomy def: "A mononuclear phagocyte present in variety of tissues, typically differentiated from monocytes, capable of phagocytosing a variety of extracellular particulate material, including immune complexes, microorganisms, and dead cells." [CL:curator] synonym: "histiocyte" EXACT [] xref: CL:0000235 xref: TAO:0009141 xref: ZFIN:ZDB-ANAT-060331-85 is_a: ZFA:0009064 ! mononuclear phagocyte is_a: ZFA:0009088 ! professional antigen presenting cell relationship: develops_from ZFA:0009265 ! monocyte relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001159 ! immune system relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0009142 name: B cell namespace: zebrafish_anatomy def: "A type of lymphocyte whose defining characteristic is the expression of an immunoglobulin complex." [ZFIN:ZDB-PUB-070221-3] synonym: "B lymphocyte" EXACT [] synonym: "B-cell" EXACT [] synonym: "B-lymphocyte" EXACT [] xref: CL:0000236 xref: TAO:0009142 xref: ZFIN:ZDB-ANAT-070308-110 is_a: ZFA:0009250 ! lymphocyte relationship: develops_from ZFA:0009349 ! pro-B cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009143 name: brush border epithelial cell namespace: zebrafish_anatomy synonym: "brush border epithelial cells" EXACT PLURAL [] xref: CL:0000239 xref: TAO:0009143 xref: ZFIN:ZDB-ANAT-070308-111 is_a: ZFA:0009038 ! columnar/cuboidal epithelial cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009144 name: stratified squamous epithelial cell namespace: zebrafish_anatomy synonym: "stratified squamous epithelial cells" EXACT PLURAL [] xref: CL:0000240 xref: TAO:0009144 xref: ZFIN:ZDB-ANAT-070308-112 is_a: ZFA:0009034 ! epithelial cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009145 name: stratified cuboidal epithelial cell namespace: zebrafish_anatomy synonym: "stratified cuboidal epithelial cells" EXACT PLURAL [] xref: CL:0000241 xref: TAO:0009145 xref: ZFIN:ZDB-ANAT-070308-113 is_a: ZFA:0009034 ! epithelial cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009146 name: Merkel cell namespace: zebrafish_anatomy def: "A modified epidermal cell located in the stratum basale. They are found mostly in areas where sensory perception is acute. Merkel cells are closely associated with an expanded terminal bulb of an afferent myelinated nerve fiber." [CL:curator] synonym: "Merkel cells" EXACT PLURAL [] xref: CL:0000242 xref: TAO:0009146 xref: ZFIN:ZDB-ANAT-070308-114 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009147 name: glial cell (sensu Vertebrata) namespace: zebrafish_anatomy def: "A non-neuronal cells of the nervous system. They not only provide physical support, but also respond to injury, regulate the ionic and chemical composition of the extracellular milieu. Form the myelin insulation of nervous pathways, guide neuronal migration during development, and exchange metabolites with neurons. Neuroglia have high-affinity transmitter uptake systems, voltage-dependent and transmitter-gated ion channels, and can release transmitters, but their role in signaling (as in many other functions) is unclear." [CL:curator] synonym: "glial cells (sensu Vertebrata)" EXACT PLURAL [] xref: CL:0000243 xref: TAO:0009147 xref: ZFIN:ZDB-ANAT-070308-115 is_a: ZFA:0009073 ! glial cell relationship: develops_from ZFA:0009169 ! glioblast (sensu Vertebrata) relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009148 name: transitional epithelial cell namespace: zebrafish_anatomy synonym: "transitional epithelial cells" EXACT PLURAL [] xref: CL:0000244 xref: TAO:0009148 xref: ZFIN:ZDB-ANAT-070308-116 is_a: ZFA:0009034 ! epithelial cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009149 name: Mauthner neuron namespace: zebrafish_anatomy alt_id: ZFA:0000087 alt_id: ZFA:0000613 def: "Is a hindbrain interneuron." [ZFIN:ZDB-PUB-961014-770] xref: CL:0000246 xref: TAO:0009149 xref: ZFIN:ZDB-ANAT-010921-507 is_a: ZFA:0009191 ! CNS interneuron relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0000545 ! medulla oblongata relationship: part_of ZFA:0001032 ! rhombomere 4 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0009150 name: Rohon-Beard neuron namespace: zebrafish_anatomy alt_id: ZFA:0000002 synonym: "RB neuron" EXACT [] synonym: "Rohon-Beard neurons" EXACT PLURAL [] xref: CL:0000247 xref: TAO:0009150 xref: ZFIN:ZDB-ANAT-010921-407 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000038 ! Larval:Day 6 relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0009151 name: hatching gland cell namespace: zebrafish_anatomy synonym: "hatching gland cells" EXACT PLURAL [] xref: CL:0000249 xref: TAO:0009151 xref: ZFIN:ZDB-ANAT-070308-117 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009152 name: extramedullary cell namespace: zebrafish_anatomy synonym: "extramedullary cells" EXACT PLURAL [] xref: CL:0000251 xref: TAO:0009152 xref: ZFIN:ZDB-ANAT-070308-118 is_a: ZFA:0009053 ! sensory neuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009153 name: eurydendroid cell namespace: zebrafish_anatomy synonym: "eurydendroid cells" EXACT PLURAL [] xref: CL:0000253 xref: TAO:0009153 xref: ZFIN:ZDB-ANAT-070308-119 is_a: ZFA:0009239 ! efferent neuron relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000603 ! valvula cerebelli relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009154 name: eye photoreceptor cell namespace: zebrafish_anatomy synonym: "eye photoreceptor cells" EXACT PLURAL [] xref: CL:0000287 xref: TAO:0009154 xref: ZFIN:ZDB-ANAT-051116-42 is_a: ZFA:0009127 ! photoreceptor cell relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000143 ! retinal photoreceptor layer relationship: part_of ZFA:0001464 ! retinal outer nuclear layer relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009155 name: somatotropin secreting cell namespace: zebrafish_anatomy def: "An acidophilic cell of the anterior pituitary that produces growth hormone, somatotropin." [CL:curator] synonym: "growth hormone secreting cell" RELATED [] synonym: "somatotrope" RELATED [] synonym: "somatotroph" RELATED [] synonym: "somatotrophin secreting cell" EXACT [] synonym: "somatotropic cell" EXACT [] synonym: "somatrophic cell" RELATED [] xref: CL:0000295 xref: TAO:0009155 xref: ZFIN:ZDB-ANAT-060816-74 is_a: ZFA:0009100 ! peptide hormone secreting cell relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001282 ! adenohypophysis relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0009156 name: gamete namespace: zebrafish_anatomy synonym: "gametes" EXACT PLURAL [] xref: CL:0000300 xref: TAO:0009156 xref: ZFIN:ZDB-ANAT-070308-120 is_a: ZFA:0009016 ! germ line cell relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000413 ! gonad relationship: start ZFS:0000041 ! Larval:Days 21-29 [Term] id: ZFA:0009157 name: keratin accumulating cell namespace: zebrafish_anatomy synonym: "keratin accumulating cells" EXACT PLURAL [] xref: CL:0000311 xref: TAO:0009157 xref: ZFIN:ZDB-ANAT-070308-121 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009158 name: keratinocyte namespace: zebrafish_anatomy def: "An epidermal cell which synthesizes keratin and undergoes a characteristic change as it moves upward from the basal layers of the epidermis to the cornified (horny) layer of the skin. Successive stages of differentiation of the keratinocytes forming the epidermal layers are basal cell, spinous or prickle cell, and the granular cell." [CL:curator] synonym: "keratinocytes" EXACT PLURAL [] xref: CL:0000312 xref: TAO:0009158 xref: ZFIN:ZDB-ANAT-070308-122 is_a: ZFA:0009157 ! keratin accumulating cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009159 name: mucus secreting cell namespace: zebrafish_anatomy alt_id: ZFA:0000129 synonym: "mucous cell" EXACT [] xref: CL:0000319 xref: TAO:0009159 xref: ZFIN:ZDB-ANAT-010921-556 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000368 ! integument relationship: part_of ZFA:0001159 ! immune system relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0009160 name: seminal fluid secreting cell namespace: zebrafish_anatomy synonym: "seminal fluid secreting cells" EXACT PLURAL [] xref: CL:0000321 xref: TAO:0009160 xref: ZFIN:ZDB-ANAT-070308-123 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009161 name: metanephric mesenchyme stem cell namespace: zebrafish_anatomy synonym: "metanephric mesenchyme stem cells" EXACT PLURAL [] xref: CL:0000324 xref: TAO:0009161 xref: ZFIN:ZDB-ANAT-070308-124 is_a: ZFA:0009020 ! multi fate stem cell relationship: develops_from ZFA:0009138 ! mesodermal cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009162 name: extracellular matrix secreting cell namespace: zebrafish_anatomy synonym: "extracellular matrix secreting cells" EXACT PLURAL [] xref: CL:0000327 xref: TAO:0009162 xref: ZFIN:ZDB-ANAT-070308-125 is_a: ZFA:0009226 ! stromal cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009163 name: myelin accumulating cell namespace: zebrafish_anatomy synonym: "myelin accumulating cells" EXACT PLURAL [] xref: CL:0000328 xref: TAO:0009163 xref: ZFIN:ZDB-ANAT-070308-126 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009164 name: oxygen accumulating cell namespace: zebrafish_anatomy synonym: "oxygen accumulating cells" EXACT PLURAL [] xref: CL:0000329 xref: TAO:0009164 xref: ZFIN:ZDB-ANAT-070308-127 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009165 name: neural crest cell namespace: zebrafish_anatomy def: "A cell of the strip of specialized ectoderm flanking each side of the embryonal neural plate, which after the closure of the neural tube, forms a column of isolated cells along the dorsal aspect of the neural tube. Most of the cranial and all of the spinal sensory ganglion cells arise by differentiation of neural crest cells." [CL:curator] synonym: "neural crest cells" EXACT PLURAL [] xref: CL:0000333 xref: TAO:0009165 xref: ZFIN:ZDB-ANAT-050915-149 is_a: ZFA:0009136 ! motile cell relationship: develops_from ZFA:0009080 ! neurectodermal cell relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0000045 ! neural crest relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0009166 name: mesenchyme condensation cell namespace: zebrafish_anatomy synonym: "mesenchyme condensation cells" EXACT PLURAL [] xref: CL:0000335 xref: TAO:0009166 xref: ZFIN:ZDB-ANAT-070308-128 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009081 ! mesenchymal cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009167 name: adrenal medulla cell namespace: zebrafish_anatomy synonym: "chromafin cell" EXACT [] xref: CL:0000336 xref: TAO:0009167 xref: ZFIN:ZDB-ANAT-070308-129 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009004 ! trunk neural crest cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009168 name: neuroblast (sensu Vertebrata) namespace: zebrafish_anatomy xref: CL:0000337 xref: TAO:0009168 xref: ZFIN:ZDB-ANAT-070308-130 is_a: ZFA:0009011 ! neuroblast relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009169 name: glioblast (sensu Vertebrata) namespace: zebrafish_anatomy synonym: "glioblasts (sensu Vertebrata)" EXACT PLURAL [] xref: CL:0000339 xref: TAO:0009169 xref: ZFIN:ZDB-ANAT-070308-131 is_a: ZFA:0009010 ! glioblast relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009170 name: pigment cell (sensu Vertebrata) namespace: zebrafish_anatomy synonym: "pigment cells (sensu Vertebrata)" EXACT PLURAL [] xref: CL:0000342 xref: TAO:0009170 xref: ZFIN:ZDB-ANAT-070308-132 is_a: ZFA:0009090 ! pigment cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009171 name: visual pigment cell (sensu Vertebrata) namespace: zebrafish_anatomy synonym: "visual pigment cells (sensu Vertebrata)" EXACT PLURAL [] xref: CL:0000343 xref: TAO:0009171 xref: ZFIN:ZDB-ANAT-070308-133 is_a: ZFA:0009170 ! pigment cell (sensu Vertebrata) relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000152 ! retina relationship: start ZFS:0000000 ! Unknown relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0009172 name: non-visual cell (sensu Vertebrata) namespace: zebrafish_anatomy synonym: "non-visual cells (sensu Vertebrata)" EXACT PLURAL [] xref: CL:0000344 xref: TAO:0009172 xref: ZFIN:ZDB-ANAT-070308-134 is_a: ZFA:0009170 ! pigment cell (sensu Vertebrata) relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009173 name: dental papilla cell namespace: zebrafish_anatomy synonym: "dental papilla cells" EXACT PLURAL [] xref: CL:0000345 xref: TAO:0009173 xref: ZFIN:ZDB-ANAT-070308-135 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009003 ! cranial neural crest cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009174 name: scleral cell namespace: zebrafish_anatomy def: "A cell of the sclera of the eye." [GOC:curator] synonym: "scleral cells" EXACT PLURAL [] xref: CL:0000347 xref: TAO:0009174 xref: ZFIN:ZDB-ANAT-070308-136 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009003 ! cranial neural crest cell relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005563 ! sclera relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009175 name: choroidal cell of the eye namespace: zebrafish_anatomy def: "A cell of the choroid of the eye." [GOC:curator] synonym: "choroidal cells" EXACT PLURAL [] xref: CL:0000348 xref: TAO:0009175 xref: ZFIN:ZDB-ANAT-070308-137 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009003 ! cranial neural crest cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009176 name: extraembryonic cell namespace: zebrafish_anatomy synonym: "extraembryonic cells" EXACT PLURAL [] xref: CL:0000349 xref: TAO:0009176 xref: ZFIN:ZDB-ANAT-070308-138 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009177 name: blastoderm cell namespace: zebrafish_anatomy def: "An undifferentiated cell produced by early cleavages of the fertilized egg (zygote)." [CL:curator] synonym: "blastomere" RELATED [] xref: CL:0000353 xref: TAO:0009177 xref: ZFIN:ZDB-ANAT-070308-139 is_a: ZFA:0009002 ! early embryonic cell relationship: end ZFS:0000022 ! Gastrula:Bud relationship: part_of ZFA:0001176 ! blastoderm relationship: start ZFS:0000016 ! Blastula:30%-epiboly [Term] id: ZFA:0009178 name: blastemal cell namespace: zebrafish_anatomy synonym: "blastemal cells" EXACT PLURAL [] xref: CL:0000354 xref: TAO:0009178 xref: ZFIN:ZDB-ANAT-070308-140 is_a: ZFA:0009020 ! multi fate stem cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009179 name: muscle stem cell namespace: zebrafish_anatomy synonym: "muscle stem cells" EXACT PLURAL [] xref: CL:0000355 xref: TAO:0009179 xref: ZFIN:ZDB-ANAT-050915-156 is_a: ZFA:0009013 ! single fate stem cell is_a: ZFA:0009291 ! muscle precursor cell relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0009180 name: stratified epithelial stem cell namespace: zebrafish_anatomy synonym: "stratified epithelial stem cells" EXACT PLURAL [] xref: CL:0000357 xref: TAO:0009180 xref: ZFIN:ZDB-ANAT-070308-141 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009181 name: vascular associated smooth muscle cell namespace: zebrafish_anatomy synonym: "vascular associated smooth muscle cells" EXACT PLURAL [] xref: CL:0000359 xref: TAO:0009181 xref: ZFIN:ZDB-ANAT-070308-142 is_a: ZFA:0009118 ! smooth muscle cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009182 name: gastrula cell namespace: zebrafish_anatomy def: "A cell of the embryo in the early stage following the blastula, characterized by morphogenetic cell movements, cell differentiation, and the formation of the three germ layers." [CL:curator] synonym: "gastrula cells" EXACT PLURAL [] xref: CL:0000361 xref: TAO:0009182 xref: ZFIN:ZDB-ANAT-070308-143 is_a: ZFA:0009002 ! early embryonic cell relationship: end ZFS:0000019 ! Gastrula:Shield relationship: start ZFS:0000017 ! Gastrula:50%-epiboly [Term] id: ZFA:0009183 name: epidermal cell namespace: zebrafish_anatomy def: "A cell found in the outermost layer of the organism." [CL:curator] synonym: "epidermal cells" EXACT PLURAL [] xref: CL:0000362 xref: TAO:0009183 xref: ZFIN:ZDB-ANAT-060816-78 is_a: ZFA:0009039 ! squamous epithelial cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009184 name: osteoprogenitor cell namespace: zebrafish_anatomy synonym: "osteoprogenitor cells" EXACT PLURAL [] xref: CL:0000375 xref: TAO:0009184 xref: ZFIN:ZDB-ANAT-070308-144 is_a: ZFA:0009013 ! single fate stem cell relationship: develops_from ZFA:0009166 ! mesenchyme condensation cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009185 name: sensory processing neuron namespace: zebrafish_anatomy synonym: "sensory processing neurons" EXACT PLURAL [] xref: CL:0000379 xref: TAO:0009185 xref: ZFIN:ZDB-ANAT-070308-145 is_a: ZFA:0009248 ! neuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009186 name: neurosecretory neuron namespace: zebrafish_anatomy synonym: "neurosecretory neurons" EXACT PLURAL [] xref: CL:0000381 xref: TAO:0009186 xref: ZFIN:ZDB-ANAT-070308-146 is_a: ZFA:0009239 ! efferent neuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009187 name: nephrogenic mesenchyme stem cell namespace: zebrafish_anatomy synonym: "nephrogenic mesenchyme stem cells" EXACT PLURAL [] xref: CL:0000383 xref: TAO:0009187 xref: ZFIN:ZDB-ANAT-070308-147 is_a: ZFA:0009020 ! multi fate stem cell relationship: develops_from ZFA:0009081 ! mesenchymal cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009188 name: ligament cell namespace: zebrafish_anatomy synonym: "ligament cells" EXACT PLURAL [] xref: CL:0000384 xref: TAO:0009188 xref: ZFIN:ZDB-ANAT-070308-148 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001675 ! ligament relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009189 name: tendon cell namespace: zebrafish_anatomy synonym: "muscle attachment cell" EXACT [] xref: CL:0000388 xref: TAO:0009189 xref: ZFIN:ZDB-ANAT-070308-149 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009190 name: electrically responsive cell namespace: zebrafish_anatomy def: "A cell whose function is determined by its response to an electric signal." [CL:curator] synonym: "electrically responsive cells" EXACT PLURAL [] xref: CL:0000393 xref: TAO:0009190 xref: ZFIN:ZDB-ANAT-070308-150 is_a: ZFA:0009128 ! electrically active cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009191 name: CNS interneuron namespace: zebrafish_anatomy synonym: "CNS interneurons" EXACT PLURAL [] xref: CL:0000402 xref: TAO:0009191 xref: ZFIN:ZDB-ANAT-070308-151 is_a: ZFA:0009051 ! interneuron is_a: ZFA:0009067 ! CNS neuron (sensu Vertebrata) relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009193 name: electrically signaling cell namespace: zebrafish_anatomy def: "A cell that initiates an electrical signal and passes that signal to another cell." [CL:curator] synonym: "electrically signaling cells" EXACT PLURAL [] xref: CL:0000404 xref: TAO:0009193 xref: ZFIN:ZDB-ANAT-070308-153 is_a: ZFA:0009128 ! electrically active cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009194 name: CNS short range interneuron namespace: zebrafish_anatomy synonym: "CNS short range interneurons" EXACT PLURAL [] xref: CL:0000406 xref: TAO:0009194 xref: ZFIN:ZDB-ANAT-070308-154 is_a: ZFA:0009191 ! CNS interneuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009195 name: CNS long range interneuron namespace: zebrafish_anatomy synonym: "CNS long range interneurons" EXACT PLURAL [] xref: CL:0000410 xref: TAO:0009195 xref: ZFIN:ZDB-ANAT-070308-155 is_a: ZFA:0009191 ! CNS interneuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009196 name: hypodermal cell namespace: zebrafish_anatomy synonym: "hypodermal cells" EXACT PLURAL [] xref: CL:0000411 xref: TAO:0009196 xref: ZFIN:ZDB-ANAT-070308-156 is_a: ZFA:0009039 ! squamous epithelial cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009198 name: xanthophore namespace: zebrafish_anatomy alt_id: ZFA:0001092 def: "A pigment cell derived from the neural crest. Contains cartenoid pigments in structures called pterinosomes or xanthosomes. This gives an appearance ranging from a golden yellow to orange and red." [CL:curator] xref: CL:0000430 xref: TAO:0009198 xref: ZFIN:ZDB-ANAT-040708-3 is_a: ZFA:0009090 ! pigment cell relationship: develops_from ZFA:0005245 ! xanthoblast relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000368 ! integument relationship: start ZFS:0000032 ! Pharyngula:High-pec [Term] id: ZFA:0009199 name: iridophore namespace: zebrafish_anatomy alt_id: ZFA:0001090 def: "A pigment cell derived from the neural crest. The cell contains flat light-reflecting platelets, probably of guanine, in stacks called reflecting platets or iridisomes. The color-generating components produce a silver, gold, or iridescent color." [CL:curator] xref: CL:0000431 xref: TAO:0009199 xref: ZFIN:ZDB-ANAT-040708-1 is_a: ZFA:0009090 ! pigment cell relationship: develops_from ZFA:0005328 ! iridoblast relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000368 ! integument relationship: start ZFS:0000032 ! Pharyngula:High-pec [Term] id: ZFA:0009200 name: reticular cell namespace: zebrafish_anatomy synonym: "reticular cells" EXACT PLURAL [] xref: CL:0000432 xref: TAO:0009200 xref: ZFIN:ZDB-ANAT-070308-158 is_a: ZFA:0009026 ! fibroblast relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009201 name: alkali secreting cell namespace: zebrafish_anatomy synonym: "alkali secreting cells" EXACT PLURAL [] xref: CL:0000435 xref: TAO:0009201 xref: ZFIN:ZDB-ANAT-070308-159 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009202 name: follicle stimulating hormone secreting cell namespace: zebrafish_anatomy synonym: "delta basophil" EXACT [] synonym: "gonadotroph" EXACT [] xref: CL:0000437 xref: TAO:0009202 xref: ZFIN:ZDB-ANAT-070308-160 is_a: ZFA:0009100 ! peptide hormone secreting cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009203 name: luteinizing hormone secreting cell namespace: zebrafish_anatomy synonym: "delta basophila" EXACT [] synonym: "gonadotroph" RELATED [] xref: CL:0000438 xref: TAO:0009203 xref: ZFIN:ZDB-ANAT-060816-75 is_a: ZFA:0009100 ! peptide hormone secreting cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009204 name: prolactin secreting cell namespace: zebrafish_anatomy def: "An acidophilic cell of the anterior pituitary that produces prolactin." [CL:curator] synonym: "epsilon-acidophil" EXACT [] synonym: "lactotrope" EXACT [] synonym: "lactotroph" EXACT [] synonym: "lactotropic cell" EXACT [] synonym: "mammotrope" EXACT [] synonym: "mammotroph" EXACT [] synonym: "mammotrophic cell" EXACT [] synonym: "mammotropic cell" EXACT [] xref: CL:0000439 xref: TAO:0009204 xref: ZFIN:ZDB-ANAT-060816-70 is_a: ZFA:0009100 ! peptide hormone secreting cell relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001282 ! adenohypophysis relationship: start ZFS:0000035 ! Larval:Protruding-mouth [Term] id: ZFA:0009205 name: melanocyte stimulating hormone secreting cell namespace: zebrafish_anatomy def: "A cell of the intermediate pituitary that produces melanocyte stimulating hormone." [CL:curator] synonym: "melanotrope" EXACT [] synonym: "melanotroph" EXACT [] xref: CL:0000440 xref: TAO:0009205 xref: ZFIN:ZDB-ANAT-060816-72 is_a: ZFA:0009100 ! peptide hormone secreting cell relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000118 ! hypophysis relationship: start ZFS:0000000 ! Unknown relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0009206 name: calcitonin secreting cell namespace: zebrafish_anatomy synonym: "calcitonin secreting cells" EXACT PLURAL [] xref: CL:0000443 xref: TAO:0009206 xref: ZFIN:ZDB-ANAT-070308-161 is_a: ZFA:0009100 ! peptide hormone secreting cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009207 name: parathyroid hormone secreting cell namespace: zebrafish_anatomy synonym: "chief cell" EXACT [] xref: CL:0000446 xref: TAO:0009207 xref: ZFIN:ZDB-ANAT-070308-162 is_a: ZFA:0009100 ! peptide hormone secreting cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009208 name: lipocyte namespace: zebrafish_anatomy synonym: "lipocytes" EXACT PLURAL [] xref: CL:0000450 xref: TAO:0009208 xref: ZFIN:ZDB-ANAT-070308-163 is_a: ZFA:0009082 ! fat cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009209 name: dendritic cell namespace: zebrafish_anatomy def: "A cell of hematopoietic origin, typically resident in particular tissues, specialized in the uptake, processing, and transport of antigens to lymph nodes for the purpose of stimulating an immune response via T cell activation." [ZFIN:ZDB-PUB-070221-3] synonym: "interdigitating cell" RELATED [] synonym: "veiled cell" RELATED [] xref: CL:0000451 xref: TAO:0009209 xref: ZFIN:ZDB-ANAT-070308-164 is_a: ZFA:0009088 ! professional antigen presenting cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009210 name: thyroid hormone secreting cell namespace: zebrafish_anatomy synonym: "thyroid hormone secreting cells" EXACT PLURAL [] xref: CL:0000452 xref: TAO:0009210 xref: ZFIN:ZDB-ANAT-070308-165 is_a: ZFA:0009096 ! endocrine cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009211 name: epinephrin secreting cell namespace: zebrafish_anatomy synonym: "epinephrin secreting cells" EXACT PLURAL [] xref: CL:0000454 xref: TAO:0009211 xref: ZFIN:ZDB-ANAT-070308-166 is_a: ZFA:0009212 ! biogenic amine secreting cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009212 name: biogenic amine secreting cell namespace: zebrafish_anatomy synonym: "biogenic amine secreting cells" EXACT PLURAL [] xref: CL:0000457 xref: TAO:0009212 xref: ZFIN:ZDB-ANAT-070308-167 is_a: ZFA:0009096 ! endocrine cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009213 name: serotonin secreting cell namespace: zebrafish_anatomy synonym: "serotin secreting cells" EXACT PLURAL [] xref: CL:0000458 xref: TAO:0009213 xref: ZFIN:ZDB-ANAT-070308-168 is_a: ZFA:0009212 ! biogenic amine secreting cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009214 name: norepinephrin secreting cell namespace: zebrafish_anatomy synonym: "norepinephrin secreting cells" EXACT PLURAL [] xref: CL:0000459 xref: TAO:0009214 xref: ZFIN:ZDB-ANAT-070308-169 is_a: ZFA:0009212 ! biogenic amine secreting cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009215 name: glucocorticoid secreting cell namespace: zebrafish_anatomy synonym: "glucocorticoid secreting cells" EXACT PLURAL [] xref: CL:0000460 xref: TAO:0009215 xref: ZFIN:ZDB-ANAT-070308-170 is_a: ZFA:0009106 ! steroid hormone secreting cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009216 name: adrenocorticotropic hormone secreting cell namespace: zebrafish_anatomy def: "A basophil cell of the anterior pituitary that produces adrenocorticotropic hormone, or corticotropin." [CL:curator] synonym: "adrenocorticotrophic hormone secreting cell" RELATED [] synonym: "corticotrope" EXACT [] synonym: "corticotroph" EXACT [] synonym: "corticotrophin hormone secreting cell" RELATED [] synonym: "corticotropin hormone secreting cell" EXACT [] xref: CL:0000467 xref: TAO:0009216 xref: ZFIN:ZDB-ANAT-060816-71 is_a: ZFA:0009100 ! peptide hormone secreting cell relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001282 ! adenohypophysis relationship: start ZFS:0000035 ! Larval:Protruding-mouth [Term] id: ZFA:0009217 name: digestive enzyme secreting cell namespace: zebrafish_anatomy synonym: "digestive enzyme secreting cells" EXACT PLURAL [] xref: CL:0000470 xref: TAO:0009217 xref: ZFIN:ZDB-ANAT-070308-171 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000339 ! digestive system relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0009218 name: thyroid stimulating hormone secreting cell namespace: zebrafish_anatomy def: "A basophil cell of the anterior pituitary that produces thyroid stimulating hormone, thyrotrophin." [CL:curator] synonym: "beta-basophil" EXACT [] synonym: "thyrotrope" EXACT [] synonym: "thyrotroph" EXACT [] xref: CL:0000476 xref: TAO:0009218 xref: ZFIN:ZDB-ANAT-060816-73 is_a: ZFA:0009100 ! peptide hormone secreting cell relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001282 ! adenohypophysis relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0009219 name: visible light photoreceptor cell namespace: zebrafish_anatomy synonym: "visible light photoreceptor cells" EXACT PLURAL [] xref: CL:0000488 xref: TAO:0009219 xref: ZFIN:ZDB-ANAT-070308-172 is_a: ZFA:0009127 ! photoreceptor cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009220 name: photopic photoreceptor cell namespace: zebrafish_anatomy synonym: "photopic photoreceptor cells" EXACT PLURAL [] xref: CL:0000490 xref: TAO:0009220 xref: ZFIN:ZDB-ANAT-070308-173 is_a: ZFA:0009219 ! visible light photoreceptor cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009221 name: UV sensitive photoreceptor cell namespace: zebrafish_anatomy synonym: "UV sensitive photoreceptor cells" EXACT PLURAL [] xref: CL:0000494 xref: TAO:0009221 xref: ZFIN:ZDB-ANAT-070308-174 is_a: ZFA:0009127 ! photoreceptor cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009222 name: blue sensitive photoreceptor cell namespace: zebrafish_anatomy synonym: "blue sensitive photoreceptor cells" EXACT PLURAL [] xref: CL:0000495 xref: TAO:0009222 xref: ZFIN:ZDB-ANAT-070308-175 is_a: ZFA:0009220 ! photopic photoreceptor cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009223 name: green sensitive photoreceptor cell namespace: zebrafish_anatomy synonym: "green sensitive photoreceptor cells" EXACT PLURAL [] xref: CL:0000496 xref: TAO:0009223 xref: ZFIN:ZDB-ANAT-070308-176 is_a: ZFA:0009220 ! photopic photoreceptor cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009224 name: red sensitive photoreceptor cell namespace: zebrafish_anatomy synonym: "red sensitive photoreceptor cells" EXACT PLURAL [] xref: CL:0000497 xref: TAO:0009224 xref: ZFIN:ZDB-ANAT-070308-177 is_a: ZFA:0009220 ! photopic photoreceptor cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009225 name: inhibitory interneuron namespace: zebrafish_anatomy synonym: "inhibitory interneurons" EXACT PLURAL [] xref: CL:0000498 xref: TAO:0009225 xref: ZFIN:ZDB-ANAT-070308-178 is_a: ZFA:0009051 ! interneuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009226 name: stromal cell namespace: zebrafish_anatomy def: "A connective tissue cell of an organ found in the loose connective tissue. These are most often associated with the uterine mucosa and the ovary as well as the hematopoietic system and elsewhere." [CL:curator] synonym: "stromal cells" EXACT PLURAL [] xref: CL:0000499 xref: TAO:0009226 xref: ZFIN:ZDB-ANAT-070308-179 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009081 ! mesenchymal cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009227 name: granulosa cell namespace: zebrafish_anatomy def: "A supporting cell for the developing female gamete in the ovary of mammals. They develop from the coelomic epithelial cells of the gonadal ridge. Granulosa cells form a single layer around the mammalian oocyte in the primordial ovarian follicle and advance to form a multilayered cumulus oophorus surrounding the ovum in the Graafian follicle. The major functions of granulosa cells include the production of steroids and LH receptors." [CL:curator] synonym: "granulosa cells" EXACT PLURAL [] xref: CL:0000501 xref: TAO:0009227 xref: ZFIN:ZDB-ANAT-070308-180 is_a: ZFA:0009106 ! steroid hormone secreting cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009228 name: D cell namespace: zebrafish_anatomy def: "A cell found throughout the gastrointestinal tract and in the pancreas. They secrete somatostatin in both an endocrine and paracrine manner. Somatostatin inhibits gastrin, cholecystokinin, insulin, glucagon, pancreatic enzymes, and gastric hydrochloric acid. A variety of substances which inhibit gastric acid secretion (vasoactive intestinal peptide, calcitonin gene-related peptide, cholecystokinin, beta-adrenergic agonists, and gastric inhibitory peptide) are thought to act by releasing somatostatin." [CL:curator] synonym: "D cells" EXACT PLURAL [] xref: CL:0000502 xref: TAO:0009228 xref: ZFIN:ZDB-ANAT-070308-181 is_a: ZFA:0009097 ! enteroendocrine cell is_a: ZFA:0009105 ! somatostatin secreting cell relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000339 ! digestive system relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0009229 name: theca cell namespace: zebrafish_anatomy def: "A flattened stroma cell forming a sheath or theca outside the basal lamina lining the mature ovarian follicle. Thecal interstitial or stromal cells are steroidogenic, and produce primarily androgens which serve as precusors of estrogens in the granulosa cells." [CL:curator] synonym: "theca cells" EXACT PLURAL [] xref: CL:0000503 xref: TAO:0009229 xref: ZFIN:ZDB-ANAT-070308-182 is_a: ZFA:0009226 ! stromal cell is_a: ZFA:0009271 ! androgen secreting cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009230 name: substance P secreting cell namespace: zebrafish_anatomy synonym: "substance P secreting cells" EXACT PLURAL [] xref: CL:0000505 xref: TAO:0009230 xref: ZFIN:ZDB-ANAT-070308-183 is_a: ZFA:0009100 ! peptide hormone secreting cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009231 name: enkephalin secreting cell namespace: zebrafish_anatomy synonym: "enkephalin secreting cells" EXACT PLURAL [] xref: CL:0000506 xref: TAO:0009231 xref: ZFIN:ZDB-ANAT-070308-184 is_a: ZFA:0009232 ! endorphin secreting cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009232 name: endorphin secreting cell namespace: zebrafish_anatomy synonym: "endorphin secreting cells" EXACT PLURAL [] xref: CL:0000507 xref: TAO:0009232 xref: ZFIN:ZDB-ANAT-070308-185 is_a: ZFA:0009100 ! peptide hormone secreting cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009233 name: paracrine cell namespace: zebrafish_anatomy synonym: "paracrine cells" EXACT PLURAL [] xref: CL:0000512 xref: TAO:0009233 xref: ZFIN:ZDB-ANAT-070308-186 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009234 name: cardiac muscle myoblast namespace: zebrafish_anatomy def: "A precursor cell destined to differentiate into cardiac myocytes." [CL:curator] synonym: "cardioblast" RELATED [] xref: CL:0000513 xref: TAO:0009234 xref: ZFIN:ZDB-ANAT-070308-187 is_a: ZFA:0009025 ! myoblast relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009235 name: smooth muscle myoblast namespace: zebrafish_anatomy def: "A precursor cell destined to differentiate into smooth muscle myocytes." [CL:curator] synonym: "satellite cell" RELATED [] xref: CL:0000514 xref: TAO:0009235 xref: ZFIN:ZDB-ANAT-070308-188 is_a: ZFA:0009025 ! myoblast relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009236 name: skeletal muscle myoblast namespace: zebrafish_anatomy def: "A myoblast that differentiates into skeletal muscle fibers." [CL:curator] synonym: "skeletal muscle myoblasts" EXACT PLURAL [] xref: CL:0000515 xref: TAO:0009236 xref: ZFIN:ZDB-ANAT-070308-189 is_a: ZFA:0009025 ! myoblast relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009237 name: perineuronal satellite cell namespace: zebrafish_anatomy def: "A non-neuronal cell that surrounds the neuronal cell bodies of the ganglia." [CL:curator] synonym: "perineural satellite cell" EXACT [] xref: CL:0000516 xref: TAO:0009237 xref: ZFIN:ZDB-ANAT-070308-190 is_a: ZFA:0009147 ! glial cell (sensu Vertebrata) relationship: develops_from ZFA:0009169 ! glioblast (sensu Vertebrata) relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009238 name: afferent neuron namespace: zebrafish_anatomy def: "A neuron which conveys sensory information centrally from the periphery." [CL:curator] synonym: "input neuron" EXACT [] xref: CL:0000526 xref: TAO:0009238 xref: ZFIN:ZDB-ANAT-070308-191 is_a: ZFA:0009009 ! neuron neural crest derived is_a: ZFA:0009248 ! neuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009239 name: efferent neuron namespace: zebrafish_anatomy def: "A neuron which sends impulses peripherally to activate muscles or secretory cells." [CL:curator] synonym: "output neuron" EXACT [] xref: CL:0000527 xref: TAO:0009239 xref: ZFIN:ZDB-ANAT-070308-192 is_a: ZFA:0009009 ! neuron neural crest derived is_a: ZFA:0009248 ! neuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009240 name: nitrergic neuron namespace: zebrafish_anatomy def: "A nerve cell where transmission is mediated by nitric oxide." [CL:curator] synonym: "nitrergic neurons" EXACT PLURAL [] xref: CL:0000528 xref: TAO:0009240 xref: ZFIN:ZDB-ANAT-070308-193 is_a: ZFA:0009059 ! autonomic neuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009241 name: pigmented epithelial cell namespace: zebrafish_anatomy synonym: "pigmented epithelial cells" EXACT PLURAL [] xref: CL:0000529 xref: TAO:0009241 xref: ZFIN:ZDB-ANAT-070308-194 is_a: ZFA:0009038 ! columnar/cuboidal epithelial cell relationship: develops_from ZFA:0009306 ! neuroepithelial cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009242 name: primary neuron namespace: zebrafish_anatomy alt_id: ZFA:0000055 xref: CL:0000530 xref: TAO:0009242 xref: ZFIN:ZDB-ANAT-010921-472 is_a: ZFA:0009248 ! neuron relationship: end ZFS:0000038 ! Larval:Day 6 relationship: part_of ZFA:0001120 ! neuroectoderm relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0009243 name: CaP motoneuron namespace: zebrafish_anatomy def: "A primary motor neuron part of the spinal cord. The CaP motoneuron is found within 1 soma diameter of the ventral root. The axon of the CaP motoneuron extends ventrally from the ventral root, within the space between the notochord and the medial surface of the axial muscles. Below the notochord, the axon extends within the ventral median septum to the ventral edge of the axial muscles, where it turns dorsally and laterally to project over the lateral surface of the axial muscles." [ZFIN:ZDB-PUB-961014-272, ZFIN:ZDB-PUB-961014-649, ZFIN:ZDB-PUB-961014-814] synonym: "CAP motoneurons" EXACT PLURAL [] synonym: "caudal primary motoneuron" EXACT [] xref: CL:0000532 xref: TAO:0009243 xref: ZFIN:ZDB-ANAT-070308-195 is_a: ZFA:0009244 ! primary motor neuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009244 name: primary motor neuron namespace: zebrafish_anatomy alt_id: ZFA:0000572 synonym: "primary motoneuron" EXACT [] xref: CL:0000533 xref: TAO:0009244 xref: ZFIN:ZDB-ANAT-011113-498 is_a: ZFA:0009052 ! motor neuron is_a: ZFA:0009242 ! primary neuron relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0009245 name: primary interneuron namespace: zebrafish_anatomy alt_id: ZFA:0000945 xref: CL:0000534 xref: TAO:0009245 xref: ZFIN:ZDB-ANAT-020309-308 is_a: ZFA:0009051 ! interneuron is_a: ZFA:0009242 ! primary neuron relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0009246 name: secondary neuron namespace: zebrafish_anatomy synonym: "secondary neurons" EXACT PLURAL [] xref: CL:0000535 xref: TAO:0009246 xref: ZFIN:ZDB-ANAT-070308-196 is_a: ZFA:0009248 ! neuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009247 name: secondary motor neuron namespace: zebrafish_anatomy alt_id: ZFA:0000584 synonym: "secondary motoneuron" EXACT [] xref: CL:0000536 xref: TAO:0009247 xref: ZFIN:ZDB-ANAT-011113-511 is_a: ZFA:0009052 ! motor neuron is_a: ZFA:0009246 ! secondary neuron relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0009248 name: neuron namespace: zebrafish_anatomy alt_id: ZFA:0000134 def: "The basic cellular unit of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system." [CL:curator] xref: CL:0000540 xref: TAO:0009248 xref: ZFIN:ZDB-ANAT-010921-563 is_a: ZFA:0009190 ! electrically responsive cell is_a: ZFA:0009193 ! electrically signaling cell relationship: develops_from ZFA:0009011 ! neuroblast relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000396 ! nervous system relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0009249 name: melanoblast namespace: zebrafish_anatomy def: "A cell that originates from the neural crest and differentiates into a pigment cell." [CL:curator] synonym: "melanoblasts" EXACT PLURAL [] xref: CL:0000541 xref: TAO:0009249 xref: ZFIN:ZDB-ANAT-050915-150 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009165 ! neural crest cell relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0009250 name: lymphocyte namespace: zebrafish_anatomy def: "A cell of the B cell, T cell, or natural killer cell lineage." [ZFIN:ZDB-PUB-070221-3] synonym: "lymphocytes" EXACT PLURAL [] xref: CL:0000542 xref: TAO:0009250 xref: ZFIN:ZDB-ANAT-070308-197 is_a: ZFA:0009357 ! mononuclear cell relationship: develops_from ZFA:0009023 ! common lymphocyte progenitor relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009251 name: granulocyte monocyte progenitor cell namespace: zebrafish_anatomy def: "A progenitor cell committed to the granulocyte and monocyte lineages." [http:www.copewithcytokines.de, ZFIN:ZDB-PUB-070221-1] synonym: "CFU-C , Colony forming unit in culture" RELATED [] synonym: "colony forming unit granulocyte macrophage" EXACT [ZFIN:ZDB-PUB-070221-1] synonym: "GMP" EXACT [ZFIN:ZDB-PUB-070221-1] synonym: "granulocyte-macrophage progenitor" EXACT [ZFIN:ZDB-PUB-070221-1] xref: CL:0000557 xref: TAO:0009251 xref: ZFIN:ZDB-ANAT-060331-74 is_a: ZFA:0009356 ! myeloid progenitor cell relationship: develops_from ZFA:0009021 ! common myeloid progenitor relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009252 name: reticulocyte namespace: zebrafish_anatomy def: "An immature erythrocyte showing a basophilic reticulum under vital staining." [ZFIN:ZDB-PUB-070221-1] synonym: "reticulocytes" EXACT PLURAL [] xref: CL:0000558 xref: TAO:0009252 xref: ZFIN:ZDB-ANAT-070308-198 is_a: ZFA:0009044 ! blood cell is_a: ZFA:0009325 ! erythroid lineage cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009253 name: promonocyte namespace: zebrafish_anatomy def: "A precursor in the monocytic series, being a cell intermediate in development between the monoblast and monocyte." [ZFIN:ZDB-PUB-070221-1] synonym: "promonocytes" EXACT PLURAL [] xref: CL:0000559 xref: TAO:0009253 xref: ZFIN:ZDB-ANAT-070308-199 is_a: ZFA:0009356 ! myeloid progenitor cell relationship: develops_from ZFA:0009017 ! monoblast relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009254 name: band form neutrophil namespace: zebrafish_anatomy def: "A late neutrophilic metamyelocyte in which the nucleus is in the form of a curved or coiled band, not having acquired the typical multilobar shape of the mature neutrophil." [ZFIN:ZDB-PUB-070221-1] synonym: "band" RELATED [] synonym: "band cell" EXACT [] synonym: "band form" EXACT [] synonym: "rod neutrophil" EXACT [] synonym: "stab cell" EXACT [] xref: CL:0000560 xref: TAO:0009254 xref: ZFIN:ZDB-ANAT-060331-80 is_a: ZFA:0009328 ! immature neutrophil relationship: develops_from ZFA:0009268 ! neutrophilic metamyelocyte relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009255 name: amacrine cell namespace: zebrafish_anatomy def: "Interneuron of the vertebrate retina. They integrate, modulate, and interpose a temporal domain in the visual message presented to the retinal ganglion cells, with which they synapse in the inner plexiform layer." [CL:curator] synonym: "amacrine neuron" EXACT [] xref: CL:0000561 xref: TAO:0009255 xref: ZFIN:ZDB-ANAT-051116-41 is_a: ZFA:0009051 ! interneuron relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000119 ! retinal inner nuclear layer relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009256 name: nucleate erythrocyte namespace: zebrafish_anatomy def: "An erythrocyte having a nucleus." [CL:curator] synonym: "RBC" EXACT [] synonym: "red blood cell" EXACT [] xref: CL:0000562 xref: TAO:0009256 xref: ZFIN:ZDB-ANAT-070308-200 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009257 name: neutrophilic promyelocyte namespace: zebrafish_anatomy def: "A neutrophil precursor in the granulocytic series, being a cell intermediate in development between a myeloblast and myelocyte, and containing a few, as yet undifferentiated, cytoplasmic granules." [ZFIN:ZDB-PUB-070221-1] synonym: "neutrophilic premyelocyte" EXACT [] synonym: "neutrophilic progranulocyte" EXACT [] synonym: "promyelocyte" EXACT [] xref: CL:0000564 xref: TAO:0009257 xref: ZFIN:ZDB-ANAT-060331-77 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009018 ! neutrophilic myeloblast relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009258 name: angioblastic mesenchymal cell namespace: zebrafish_anatomy synonym: "angioblast" EXACT [] xref: CL:0000566 xref: TAO:0009258 xref: ZFIN:ZDB-ANAT-070308-201 is_a: ZFA:0009020 ! multi fate stem cell relationship: develops_from ZFA:0009081 ! mesenchymal cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009259 name: cardiac mesenchymal cell namespace: zebrafish_anatomy def: "A mesenchymal cell found in the developing heart." [PMID:18816864] synonym: "cardiac mesenchymal cells" EXACT PLURAL [] xref: CL:0000569 xref: TAO:0009259 xref: ZFIN:ZDB-ANAT-070308-202 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009004 ! trunk neural crest cell relationship: develops_from ZFA:0009081 ! mesenchymal cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009260 name: parafollicular cell namespace: zebrafish_anatomy synonym: "C cell" EXACT [] xref: CL:0000570 xref: TAO:0009260 xref: ZFIN:ZDB-ANAT-070308-203 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009165 ! neural crest cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009261 name: leucophore namespace: zebrafish_anatomy def: "A pigment cell derived from the neural crest. Contains uric acid or other purine crystals deposited in stacks called leucosomes. The crystals reflect light and this gives a white appearance under white light." [CL:curator] synonym: "leucophores" EXACT PLURAL [] xref: CL:0000571 xref: TAO:0009261 xref: ZFIN:ZDB-ANAT-070308-204 is_a: ZFA:0009090 ! pigment cell relationship: develops_from ZFA:0005329 ! leucoblast relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000368 ! integument relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009262 name: retinal cone cell namespace: zebrafish_anatomy def: "One of the two photoreceptor cell types in the vertebrate retina. In cones the photopigment is in invaginations of the cell membrane of the outer segment. Cones are less sensitive to light than rods, but they provide vision with higher spatial and temporal acuity, and the combination of signals from cones with different pigments allows color vision." [CL:curator] synonym: "retinal cone cells" EXACT PLURAL [] xref: CL:0000573 xref: TAO:0009262 xref: ZFIN:ZDB-ANAT-051116-43 is_a: ZFA:0009154 ! eye photoreceptor cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009263 name: erythrophore namespace: zebrafish_anatomy def: "A pigment cell derived from the neural crest. Contains pteridine and/or carotenoid pigments in structures called pterinosomes or erythrosomes. This gives an orange to red appearance." [CL:curator] synonym: "erythrophores" EXACT PLURAL [] xref: CL:0000574 xref: TAO:0009263 xref: ZFIN:ZDB-ANAT-070308-205 is_a: ZFA:0009090 ! pigment cell relationship: develops_from ZFA:0005331 ! pigment erythroblast relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000368 ! integument relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009264 name: corneal epithelial cell namespace: zebrafish_anatomy synonym: "corneal epithelial cells" EXACT PLURAL [] xref: CL:0000575 xref: TAO:0009264 xref: ZFIN:ZDB-ANAT-070308-206 is_a: ZFA:0009039 ! squamous epithelial cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009265 name: monocyte namespace: zebrafish_anatomy def: "Myeloid mononuclear recirculating leukocyte that can act as a precursor of tissue macrophages, osteoclasts and some populations of tissue dendritic cells." [CL:curator] synonym: "monocytes" EXACT PLURAL [] xref: CL:0000576 xref: TAO:0009265 xref: ZFIN:ZDB-ANAT-070308-207 is_a: ZFA:0009064 ! mononuclear phagocyte is_a: ZFA:0009088 ! professional antigen presenting cell relationship: develops_from ZFA:0009253 ! promonocyte relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009266 name: neutrophilic myelocyte namespace: zebrafish_anatomy def: "A neutrophil precursor in the granulocytic series, being a cell intermediate in development between a promyelocyte and a metamyelocyte; in this stage, differentiation of cytoplasmic granules has begun." [ZFIN:ZDB-PUB-070221-1] synonym: "neutrophilic myelocytes" EXACT PLURAL [] xref: CL:0000580 xref: TAO:0009266 xref: ZFIN:ZDB-ANAT-060331-78 is_a: ZFA:0009328 ! immature neutrophil relationship: develops_from ZFA:0009257 ! neutrophilic promyelocyte relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009267 name: peritoneal macrophage namespace: zebrafish_anatomy def: "A macrophage resident in the peritoneum under non-inlfammatory conditions." [CL:curator] synonym: "peritoneal macrophages" EXACT PLURAL [] xref: CL:0000581 xref: TAO:0009267 xref: ZFIN:ZDB-ANAT-070308-208 is_a: ZFA:0009141 ! macrophage relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009268 name: neutrophilic metamyelocyte namespace: zebrafish_anatomy def: "A neutrophil precursor in the granulocytic series, being a cell intermediate in development between a meylocyte and the band form neutrophil. The protein synthesis seen in earlier stages decreases or stops; the nucleus becomes indented and its chromatin becomes coarse and clumped; and the cytoplasm becomes pink like that of a mature granulocyte." [ZFIN:ZDB-PUB-070221-1] synonym: "juvenile neutrophil" EXACT [] xref: CL:0000582 xref: TAO:0009268 xref: ZFIN:ZDB-ANAT-060331-79 is_a: ZFA:0009328 ! immature neutrophil relationship: develops_from ZFA:0009266 ! neutrophilic myelocyte relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009269 name: enterocyte namespace: zebrafish_anatomy def: "An epithelial cell that has its apical plasma membrane folded into microvilli to provide ample surface for the absorption of nutrients from the intestinal lumen." [SANBI:curator] synonym: "enterocytes" EXACT PLURAL [] xref: CL:0000584 xref: TAO:0009269 xref: ZFIN:ZDB-ANAT-070308-209 is_a: ZFA:0009143 ! brush border epithelial cell relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005124 ! intestinal epithelium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009270 name: odontoclast namespace: zebrafish_anatomy def: "A specialized osteoclast associated with the absorption and removal of cementum." [CL:curator] synonym: "odontoclasts" EXACT PLURAL [] xref: CL:0000588 xref: TAO:0009270 xref: ZFIN:ZDB-ANAT-070308-210 is_a: ZFA:0009047 ! osteoclast relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009271 name: androgen secreting cell namespace: zebrafish_anatomy synonym: "androgen secreting cells" EXACT PLURAL [] xref: CL:0000593 xref: TAO:0009271 xref: ZFIN:ZDB-ANAT-070308-211 is_a: ZFA:0009106 ! steroid hormone secreting cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009272 name: skeletal muscle satellite cell namespace: zebrafish_anatomy def: "An elongated, spindle-shaped, quiescent myoblast lying in close contact with adult skeletal muscle. They are thought to play a role in muscle repair and regeneration." [CL:curator] synonym: "skeletal muscle satellite cells" EXACT PLURAL [] xref: CL:0000594 xref: TAO:0009272 xref: ZFIN:ZDB-ANAT-070308-212 is_a: ZFA:0009236 ! skeletal muscle myoblast relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009273 name: pyramidal cell namespace: zebrafish_anatomy def: "A projection neuron in the cerebral cortex and the hippocampus. Pyramidal cells have a pyramid-shaped soma with the apex and an apical dendrite pointed toward the pial surface and other dendrites and an axon emerging from the base. The axons may have local collaterals but also project outside their cortical region." [CL:curator] synonym: "pyramidal cells" EXACT PLURAL [] xref: CL:0000598 xref: TAO:0009273 xref: ZFIN:ZDB-ANAT-070308-213 is_a: ZFA:0009067 ! CNS neuron (sensu Vertebrata) relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009274 name: pressoreceptor cell namespace: zebrafish_anatomy def: "A receptor in the vascular system, particularly the aorta and carotid sinus, which is sensitive to stretch of the vessel walls." [CL:curator] synonym: "pressoreceptor cells" EXACT PLURAL [] xref: CL:0000602 xref: TAO:0009274 xref: ZFIN:ZDB-ANAT-070308-214 is_a: ZFA:0009370 ! stretch receptor cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009275 name: retinal rod cell namespace: zebrafish_anatomy def: "One of the two photoreceptor cell types of the vertebrate retina. In rods the photopigment is in stacks of membranous disks separate from the outer cell membrane. Rods are more sensitive to light than cones, but rod mediated vision has less spatial and temporal resolution than cone vision." [CL:curator] synonym: "retinal rod cells" EXACT PLURAL [] xref: CL:0000604 xref: TAO:0009275 xref: ZFIN:ZDB-ANAT-051116-44 is_a: ZFA:0009154 ! eye photoreceptor cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009276 name: GABAergic neuron namespace: zebrafish_anatomy synonym: "GABAergic neurons" EXACT PLURAL [] xref: CL:0000617 xref: TAO:0009276 xref: ZFIN:ZDB-ANAT-070308-215 is_a: ZFA:0009059 ! autonomic neuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009277 name: acinar cell namespace: zebrafish_anatomy synonym: "acinar cells" EXACT PLURAL [] xref: CL:0000622 xref: TAO:0009277 xref: ZFIN:ZDB-ANAT-070308-216 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009278 name: natural killer cell namespace: zebrafish_anatomy def: "A lymphocyte that can spontaneously kill a variety of target cells without prior antigenic activation via germline encoded activation receptors and also regulate immune responses via cytokine release and direct contact with other cells." [ZFIN:ZDB-PUB-070221-3] synonym: "large granular lymphocyte" RELATED [] synonym: "NK cell" EXACT [] synonym: "null cell" RELATED [] xref: CL:0000623 xref: TAO:0009278 xref: ZFIN:ZDB-ANAT-070308-217 is_a: ZFA:0009250 ! lymphocyte relationship: develops_from ZFA:0009348 ! pro-NK cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009279 name: ito cell namespace: zebrafish_anatomy synonym: "perisinusoidal cell" EXACT [] xref: CL:0000632 xref: TAO:0009279 xref: ZFIN:ZDB-ANAT-070308-218 is_a: ZFA:0009162 ! extracellular matrix secreting cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009280 name: Muller cell namespace: zebrafish_anatomy synonym: "Muller cells" EXACT PLURAL [] xref: CL:0000636 xref: TAO:0009280 xref: ZFIN:ZDB-ANAT-050915-161 is_a: ZFA:0009075 ! astrocyte relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000119 ! retinal inner nuclear layer relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009281 name: folliculostellate cell namespace: zebrafish_anatomy def: "A supportive cell of the vertebrate pituitary that provides macromolecular transport and secretes hormones." [CL:curator] synonym: "folliculostellate cells" EXACT PLURAL [] xref: CL:0000642 xref: TAO:0009281 xref: ZFIN:ZDB-ANAT-070308-219 is_a: ZFA:0009096 ! endocrine cell relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000118 ! hypophysis relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0009282 name: Bergmann glial cell namespace: zebrafish_anatomy synonym: "Bergmann glial cells" EXACT PLURAL [] xref: CL:0000644 xref: TAO:0009282 xref: ZFIN:ZDB-ANAT-070308-220 is_a: ZFA:0009075 ! astrocyte relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009283 name: mesangial cell namespace: zebrafish_anatomy synonym: "mesangial cells" EXACT PLURAL [] xref: CL:0000650 xref: TAO:0009283 xref: ZFIN:ZDB-ANAT-070308-221 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009081 ! mesenchymal cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009284 name: pinealocyte namespace: zebrafish_anatomy synonym: "pinealocytes" EXACT PLURAL [] xref: CL:0000652 xref: TAO:0009284 xref: ZFIN:ZDB-ANAT-070308-222 is_a: ZFA:0009096 ! endocrine cell relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000019 ! epiphysis relationship: start ZFS:0000000 ! Unknown relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0009285 name: podocyte namespace: zebrafish_anatomy synonym: "podocytes" EXACT PLURAL [] xref: CL:0000653 xref: TAO:0009285 xref: ZFIN:ZDB-ANAT-070308-223 is_a: ZFA:0009034 ! epithelial cell relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000163 ! renal system relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0009286 name: fenestrated cell namespace: zebrafish_anatomy synonym: "window cell" EXACT [] xref: CL:0000666 xref: TAO:0009286 xref: ZFIN:ZDB-ANAT-070308-224 is_a: ZFA:0009034 ! epithelial cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009287 name: collagen secreting cell namespace: zebrafish_anatomy synonym: "collagen secreting cells" EXACT PLURAL [] xref: CL:0000667 xref: TAO:0009287 xref: ZFIN:ZDB-ANAT-070308-225 is_a: ZFA:0009162 ! extracellular matrix secreting cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009288 name: primordial germ cell namespace: zebrafish_anatomy alt_id: ZFA:0000065 xref: CL:0000670 xref: TAO:0009288 xref: ZFIN:ZDB-ANAT-010921-483 is_a: ZFA:0009016 ! germ line cell is_a: ZFA:0009136 ! motile cell relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0000632 ! reproductive system relationship: start ZFS:0000014 ! Blastula:Sphere [Term] id: ZFA:0009289 name: gut absorptive cell namespace: zebrafish_anatomy def: "Cell of the intestinal epithelium with a brush border made up of many parallel packed microvilli; associated with absorption, particularly of macromolecules." [CL:curator] synonym: "gut absorptive cells" EXACT PLURAL [] xref: CL:0000677 xref: TAO:0009289 xref: ZFIN:ZDB-ANAT-070308-226 is_a: ZFA:0009129 ! absorptive cell relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000112 ! gut relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0009290 name: glutamatergic neuron namespace: zebrafish_anatomy synonym: "glutamatergic neurons" EXACT PLURAL [] xref: CL:0000679 xref: TAO:0009290 xref: ZFIN:ZDB-ANAT-070308-227 is_a: ZFA:0009059 ! autonomic neuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009291 name: muscle precursor cell namespace: zebrafish_anatomy synonym: "muscle precursor cells" EXACT PLURAL [] xref: CL:0000680 xref: TAO:0009291 xref: ZFIN:ZDB-ANAT-050915-155 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0000041 ! mesoderm relationship: develops_from ZFA:0009138 ! mesodermal cell relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000020 ! Gastrula:75%-epiboly [Term] id: ZFA:0009292 name: radial glial cell namespace: zebrafish_anatomy def: "A transient cell present only in the developing CNS. Functions as both a precursor cell and as a scaffold to support neuronal migration." [CL:curator] synonym: "radial glial cells" EXACT PLURAL [] xref: CL:0000681 xref: TAO:0009292 xref: ZFIN:ZDB-ANAT-050915-162 is_a: ZFA:0009168 ! neuroblast (sensu Vertebrata) relationship: develops_from ZFA:0001120 ! neuroectoderm relationship: develops_from ZFA:0009306 ! neuroepithelial cell relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0009293 name: M cell namespace: zebrafish_anatomy def: "An absorptive cell of the mammalian gut epithelium that endocytoses microorganisms and intact macromolecules from the gut lumen and transports them to the subepithelial space where they are presented to antigen-presenting cells and lymphocytes." [CL:curator] synonym: "M cells" EXACT PLURAL [] xref: CL:0000682 xref: TAO:0009293 xref: ZFIN:ZDB-ANAT-070308-228 is_a: ZFA:0009034 ! epithelial cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009294 name: ependymoglial cell namespace: zebrafish_anatomy def: "A cell that transports hormones from neurosecretory cells." [CL:curator] synonym: "ependymoglial cells" EXACT PLURAL [] xref: CL:0000683 xref: TAO:0009294 xref: ZFIN:ZDB-ANAT-070308-229 is_a: ZFA:0009075 ! astrocyte relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009295 name: cerebrospinal fluid secreting cell namespace: zebrafish_anatomy synonym: "cerebrospinal fluid secreting cells" EXACT PLURAL [] xref: CL:0000686 xref: TAO:0009295 xref: ZFIN:ZDB-ANAT-070308-230 is_a: ZFA:0009038 ! columnar/cuboidal epithelial cell relationship: develops_from ZFA:0009165 ! neural crest cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009296 name: perijunctional fibroblast namespace: zebrafish_anatomy def: "A fibroblast-like cell that provides support at neuromuscular junctions in vertebrates and are localized outside the synaptic basal lamina." [CL:curator] synonym: "perijunctional fibroblasts" EXACT PLURAL [] xref: CL:0000688 xref: TAO:0009296 xref: ZFIN:ZDB-ANAT-070308-231 is_a: ZFA:0009026 ! fibroblast relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009297 name: stellate interneuron namespace: zebrafish_anatomy synonym: "stellate interneurons" EXACT PLURAL [] xref: CL:0000691 xref: TAO:0009297 xref: ZFIN:ZDB-ANAT-070308-232 is_a: ZFA:0009051 ! interneuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009298 name: terminal Schwann cell namespace: zebrafish_anatomy def: "A neuroglial cell of the peripheral nervous system inside the basal lamina of the neuromuscular junction providing chemical and physical support to the synapse." [CL:curator] synonym: "terminal Schwann cells" EXACT PLURAL [] xref: CL:0000692 xref: TAO:0009298 xref: ZFIN:ZDB-ANAT-070308-233 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009073 ! glial cell relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000142 ! peripheral nervous system relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009299 name: neuroglioform cell namespace: zebrafish_anatomy def: "A stellate interneuron having 7-10 dendrites that may branch." [CL:curator] synonym: "spiderweb cell" EXACT [] xref: CL:0000693 xref: TAO:0009299 xref: ZFIN:ZDB-ANAT-070308-234 is_a: ZFA:0009297 ! stellate interneuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009300 name: Cajal-Retzius cell namespace: zebrafish_anatomy def: "One of a transient population of pioneering neurons in the cerebral cortex. These cells are slender bipolar cells of the developing marginal zone. One feature of these cells in mammals is that they express the Reelin gene." [CL:curator] synonym: "Cajal-Retzius cells" EXACT PLURAL [] xref: CL:0000695 xref: TAO:0009300 xref: ZFIN:ZDB-ANAT-070308-235 is_a: ZFA:0009067 ! CNS neuron (sensu Vertebrata) relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009301 name: dopaminergic neuron namespace: zebrafish_anatomy def: "A neuron that releases dopamine as a neurotransmitter." [CL:curator] synonym: "dopaminergic neurons" EXACT PLURAL [] xref: CL:0000700 xref: TAO:0009301 xref: ZFIN:ZDB-ANAT-060816-77 is_a: ZFA:0009059 ! autonomic neuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009302 name: sustentacular cell namespace: zebrafish_anatomy def: "Cell that provides some or all mechanical, nutritional and phagocytic support to their neighbors." [CL:curator] synonym: "sustentacular cells" EXACT PLURAL [] xref: CL:0000703 xref: TAO:0009302 xref: ZFIN:ZDB-ANAT-070308-236 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009303 name: endothelial tip cell namespace: zebrafish_anatomy def: "A specialized endothelial cell that senses extracellular signals and guides the directed growth of blood vessels." [CL:curator] synonym: "endothelial tip cells" EXACT PLURAL [] xref: CL:0000704 xref: TAO:0009303 xref: ZFIN:ZDB-ANAT-070308-237 is_a: ZFA:0009036 ! blood vessel endothelial cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009304 name: choroid plexus epithelial cell namespace: zebrafish_anatomy def: "Specialized ependymal cell that produces the cerebrospinal fluid from the blood and secretes it into the lumen of the brain and spinal chord." [CL:curator] synonym: "choroid plexus epithelial cells" EXACT PLURAL [] xref: CL:0000706 xref: TAO:0009304 xref: ZFIN:ZDB-ANAT-070308-238 is_a: ZFA:0009033 ! ependymal cell relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001443 ! choroid plexus relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009305 name: leptomeningeal cell namespace: zebrafish_anatomy def: "Stromal cell that forms the internal covering of the vertebrate brain and produces ECM for this and the choroid plexus." [CL:curator] synonym: "leptomemingeal cell" RELATED [] synonym: "leptomeningeal cells" EXACT PLURAL [] xref: CL:0000708 xref: TAO:0009305 xref: ZFIN:ZDB-ANAT-070308-239 is_a: ZFA:0009162 ! extracellular matrix secreting cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009306 name: neuroepithelial cell namespace: zebrafish_anatomy synonym: "neuroepithelial cells" EXACT PLURAL [] xref: CL:0000710 xref: TAO:0009306 xref: ZFIN:ZDB-ANAT-070308-240 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009080 ! neurectodermal cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009307 name: somatic stem cell namespace: zebrafish_anatomy def: "A stem cell that can give rise to cell types of the body other than those of the germ-line." [GO:0048103] synonym: "somatic stem cells" EXACT PLURAL [] xref: CL:0000723 xref: TAO:0009307 xref: ZFIN:ZDB-ANAT-070308-241 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009308 name: urothelial cell namespace: zebrafish_anatomy def: "A cell of a layer of transitional epithelium in the wall of the bladder, ureter, and renal pelvis, external to the lamina propria." [CL:curator] synonym: "urothelial cells" EXACT PLURAL [] xref: CL:0000731 xref: TAO:0009308 xref: ZFIN:ZDB-ANAT-070308-242 is_a: ZFA:0009034 ! epithelial cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009309 name: leukocyte namespace: zebrafish_anatomy def: "A nucleated cell of the myeloid or lymphoid lineages, found in blood or other tissue." [CL:curator] synonym: "immune cell" EXACT [] synonym: "leucocyte" EXACT [] synonym: "white blood cell" EXACT [] xref: CL:0000738 xref: TAO:0009309 xref: ZFIN:ZDB-ANAT-070308-243 is_a: ZFA:0009043 ! circulating cell is_a: ZFA:0009136 ! motile cell relationship: develops_from ZFA:0009014 ! hematopoietic stem cell relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001159 ! immune system relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009310 name: retinal ganglion cell namespace: zebrafish_anatomy def: "The set of neurons that receives neural inputs via bipolar, horizontal and amacrine cells. The axons of these cells make up the optic nerve." [CL:curator] synonym: "gangliocyte" EXACT [] synonym: "RGC" EXACT [] xref: CL:0000740 xref: TAO:0009310 xref: ZFIN:ZDB-ANAT-051116-46 is_a: ZFA:0009067 ! CNS neuron (sensu Vertebrata) relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000024 ! retinal ganglion cell layer relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009311 name: spinal accessory motor neuron namespace: zebrafish_anatomy def: "A motor neuron that is located in the cervical region of the spinal cord and selectively innervates the sternocleidmastoid or trapezius muscle. Unlike other motor neurons, they extend axons dorsally along lateral margins of the spinal cord." [CL:curator] synonym: "SACMN" EXACT [] xref: CL:0000741 xref: TAO:0009311 xref: ZFIN:ZDB-ANAT-070308-244 is_a: ZFA:0009052 ! motor neuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009312 name: periarticular chondrocyte namespace: zebrafish_anatomy def: "A round chondrocyte that first differentiates in the late embryonic growth plate of bone." [CL:curator] synonym: "periarticular chondrocytes" EXACT PLURAL [] xref: CL:0000742 xref: TAO:0009312 xref: ZFIN:ZDB-ANAT-070308-245 is_a: ZFA:0009084 ! chondrocyte relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009313 name: hypertrophic chondrocyte namespace: zebrafish_anatomy def: "A terminally differentiated chondrocyte that differentiates in the late embryonic growth plate of bone." [CL:curator] synonym: "hypertrophic chondrocytes" EXACT PLURAL [] xref: CL:0000743 xref: TAO:0009313 xref: ZFIN:ZDB-ANAT-070308-246 is_a: ZFA:0009084 ! chondrocyte relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009314 name: columnar chondrocyte namespace: zebrafish_anatomy def: "A columnar chondrocyte that differentiates in the late embryonic growth plate of bone. Columnar chondrocytes vigorously proliferate and form columns in the growth plate." [CL:curator] synonym: "columnar chondrocytes" EXACT PLURAL [] xref: CL:0000744 xref: TAO:0009314 xref: ZFIN:ZDB-ANAT-070308-247 is_a: ZFA:0009084 ! chondrocyte relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009315 name: horizontal cell namespace: zebrafish_anatomy def: "A neuron that laterally connects other neurons in the inner nuclear layer of the retina." [ZFIN:ZDB-PUB-070221-6] synonym: "horizontal cells" EXACT PLURAL [] xref: CL:0000745 xref: TAO:0009315 xref: ZFIN:ZDB-ANAT-070308-248 is_a: ZFA:0009051 ! interneuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009316 name: cardiac muscle cell namespace: zebrafish_anatomy synonym: "cardiac muscle cells" EXACT PLURAL [] synonym: "cardiac myocyte" EXACT [] synonym: "cardiomyocyte" EXACT [] xref: CL:0000746 xref: TAO:0009316 xref: ZFIN:ZDB-ANAT-070308-249 is_a: ZFA:0009114 ! muscle cell relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001319 ! myocardium relationship: part_of ZFA:0005280 ! cardiac muscle relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009317 name: cyanophore namespace: zebrafish_anatomy def: "A pigment cell derived from the neural crest. Contains blue pigment of unknown chemical composition in fibrous organelles termed cyanosomes. This gives a blue appearance." [CL:curator] synonym: "blue chromatophore" EXACT [] xref: CL:0000747 xref: TAO:0009317 xref: ZFIN:ZDB-ANAT-070308-250 is_a: ZFA:0009090 ! pigment cell relationship: develops_from ZFA:0005332 ! cyanoblast relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000368 ! integument relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009318 name: retinal bipolar neuron namespace: zebrafish_anatomy def: "A bipolar neuron found in the retina and having connections with photoreceptors cells and neurons in the inner plexiform layer." [CL:curator] xref: CL:0000748 xref: TAO:0009318 xref: ZFIN:ZDB-ANAT-070308-251 is_a: ZFA:0009055 ! bipolar neuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009319 name: ON-bipolar cell namespace: zebrafish_anatomy def: "A bipolar neuron found in the retina and having connections with photoreceptors cells and neurons in the inner half of the inner plexiform layer. These cells depolarize in response to light stimulation of their corresponding photoreceptors." [CL:curator] synonym: "ON-bipolar cells" EXACT PLURAL [] xref: CL:0000749 xref: TAO:0009319 xref: ZFIN:ZDB-ANAT-070308-252 is_a: ZFA:0009318 ! retinal bipolar neuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009320 name: OFF-bipolar cell namespace: zebrafish_anatomy def: "A bipolar neuron found in the retina and having connections with photoreceptors cells and neurons in the outer half of the inner plexiform layer. These cells hyperpolarize in response to light stimulation of their corresponding photoreceptors." [CL:curator] synonym: "OFF-bipolar cells" EXACT PLURAL [] xref: CL:0000750 xref: TAO:0009320 xref: ZFIN:ZDB-ANAT-070308-253 is_a: ZFA:0009318 ! retinal bipolar neuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009321 name: rod bipolar cell namespace: zebrafish_anatomy def: "A bipolar neuron found in the retina and having connections with rod photoreceptor cells and neurons in the inner plexiform layer." [CL:curator] synonym: "rod bipolar cells" EXACT PLURAL [] xref: CL:0000751 xref: TAO:0009321 xref: ZFIN:ZDB-ANAT-070308-254 is_a: ZFA:0009318 ! retinal bipolar neuron is_a: ZFA:0009319 ! ON-bipolar cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009322 name: cone retinal bipolar cell namespace: zebrafish_anatomy def: "A bipolar neuron found in the retina and having connections with cone photoreceptor cells and neurons in the inner plexiform layer." [CL:curator] synonym: "cone retinal bipolar cells" EXACT PLURAL [] xref: CL:0000752 xref: TAO:0009322 xref: ZFIN:ZDB-ANAT-070308-255 is_a: ZFA:0009318 ! retinal bipolar neuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009323 name: thrombocyte namespace: zebrafish_anatomy def: "A nucleated blood cell involved in coagulation, typically seen in birds and other non-mammalian vertebrates." [CL:curator] comment: Note that this is a non-mammalian cell type. Use platelet ; CL:0000233 for thrombocytes (platelets) in mammals. synonym: "thrombocytes" EXACT PLURAL [] xref: CL:0000762 xref: TAO:0009323 xref: ZFIN:ZDB-ANAT-070308-256 is_a: ZFA:0009044 ! blood cell is_a: ZFA:0009324 ! myeloid cell relationship: develops_from ZFA:0009351 ! thromboblast relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009324 name: myeloid cell namespace: zebrafish_anatomy def: "A cell of the monocyte, granulocyte, mast cell, megakaryocyte, or erythroid lineage." [CL:curator] synonym: "myeloid cells" EXACT PLURAL [] xref: CL:0000763 xref: TAO:0009324 xref: ZFIN:ZDB-ANAT-070308-257 is_a: ZFA:0009043 ! circulating cell relationship: develops_from ZFA:0009021 ! common myeloid progenitor relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009325 name: erythroid lineage cell namespace: zebrafish_anatomy def: "A immature or mature cell in the lineage leading to and including erythrocytes." [CL:curator] synonym: "erythroid lineage cells" EXACT PLURAL [] xref: CL:0000764 xref: TAO:0009325 xref: ZFIN:ZDB-ANAT-070308-258 is_a: ZFA:0009324 ! myeloid cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009326 name: myeloid leukocyte namespace: zebrafish_anatomy def: "A cell of the monocyte, granulocyte, or mast cell lineage." [CL:curator] synonym: "myeloid leukocytes" EXACT PLURAL [] xref: CL:0000766 xref: TAO:0009326 xref: ZFIN:ZDB-ANAT-070308-259 is_a: ZFA:0009309 ! leukocyte is_a: ZFA:0009324 ! myeloid cell relationship: develops_from ZFA:0009021 ! common myeloid progenitor relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009327 name: neutrophil namespace: zebrafish_anatomy def: "Any of the immature or mature forms of a granular leukocyte that in its mature form has a nucleus with three to five lobes connected by slender threads of chromatin, and cytoplasm containing fine inconspicuous granules and stainable by neutral dyes." [ZFIN:ZDB-PUB-070221-1] synonym: "neutrocyte" EXACT [] synonym: "neutrophil leucocyte" EXACT [] synonym: "neutrophil leukocyte" EXACT [] synonym: "neutrophilic leucocyte" EXACT [] synonym: "neutrophilic leukocyte" EXACT [] synonym: "PMN" RELATED [] synonym: "polymorphonuclear leucocyte" RELATED [] synonym: "polymorphonuclear leukocyte" RELATED [] synonym: "polymorphonuclear neutrophil" RELATED [] synonym: "polynuclear neutrophilic leucocyte" RELATED [] synonym: "polynuclear neutrophilic leukocyte" RELATED [] xref: CL:0000775 xref: TAO:0009327 xref: ZFIN:ZDB-ANAT-070308-260 is_a: ZFA:0009048 ! granulocyte relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009328 name: immature neutrophil namespace: zebrafish_anatomy def: "Any of the immature forms of a neutrophil in which neutrophilic specific granules are present but other phenotypic features of the mature form may be lacking. A neutrophil is a granular leukocyte that in its mature form has a nucleus with three to five lobes connected by slender threads of chromatin, and cytoplasm containing fine inconspicuous granules and stainable by neutral dyes." [ZFIN:ZDB-PUB-070221-1] synonym: "immature neutrocyte" EXACT [] synonym: "immature neutrophil leucocyte" EXACT [] synonym: "immature neutrophil leukocyte" EXACT [] synonym: "immature neutrophilic leucocyte" EXACT [] xref: CL:0000776 xref: TAO:0009328 xref: ZFIN:ZDB-ANAT-070308-261 is_a: ZFA:0009327 ! neutrophil relationship: develops_from ZFA:0009257 ! neutrophilic promyelocyte relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009329 name: mononuclear osteoclast namespace: zebrafish_anatomy def: "A specialized mononuclear osteoclast associated with the absorption and removal of bone, precursor of multinuclear osteoclasts." [CL:curator] synonym: "mononuclear osteoclasts" EXACT PLURAL [] xref: CL:0000778 xref: TAO:0009329 xref: ZFIN:ZDB-ANAT-070308-262 is_a: ZFA:0009047 ! osteoclast is_a: ZFA:0009064 ! mononuclear phagocyte relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009330 name: mononuclear odontoclast namespace: zebrafish_anatomy def: "A specialized mononuclear osteoclast associated with the absorption and removal of cementum." [CL:curator] synonym: "mononuclear odontoclasts" EXACT PLURAL [] xref: CL:0000781 xref: TAO:0009330 xref: ZFIN:ZDB-ANAT-070308-263 is_a: ZFA:0009270 ! odontoclast is_a: ZFA:0009329 ! mononuclear osteoclast relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009331 name: mature B cell namespace: zebrafish_anatomy def: "A B cell that is mature, having left the bone marrow. Initially, these cells are IgM-positive and IgD-positive, and they can be activated by antigen." [ZFIN:ZDB-PUB-070221-3] synonym: "mature B lymphocyte" EXACT [] synonym: "mature B-cell" EXACT [] synonym: "mature B-lymphocyte" EXACT [] xref: CL:0000785 xref: TAO:0009331 xref: ZFIN:ZDB-ANAT-070308-264 is_a: ZFA:0009088 ! professional antigen presenting cell is_a: ZFA:0009142 ! B cell relationship: develops_from ZFA:0009343 ! immature B cell relationship: develops_from ZFA:0009345 ! transitional stage B cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009332 name: plasma cell namespace: zebrafish_anatomy def: "A terminally differentiated, post-mitotic, antibody secreting cell of the B cell lineage with the phenotype CD138-positive, surface immunonoglobulin-negative, and MHC Class II-negative. Plasma cells are oval or round with extensive rough endoplasmic reticulum, a well-developed Golgi apparatus, and a round nucleus having a characteristic cartwheel heterochromatin pattern and are devoted to producing large amounts of immunoglobulin." [ZFIN:ZDB-PUB-070221-1, ZFIN:ZDB-PUB-070221-3] synonym: "plasmacyte" EXACT [] xref: CL:0000786 xref: TAO:0009332 xref: ZFIN:ZDB-ANAT-070308-265 is_a: ZFA:0009250 ! lymphocyte relationship: develops_from ZFA:0009331 ! mature B cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009333 name: memory B cell namespace: zebrafish_anatomy def: "A memory B cell is a mature B cell that is long-lived, readily activated upon re-encounter of its antigenic determinant, and has been selected for expression of higher affinity immunoglobulin. This cell type has the phenotype CD19-positive, CD20-positive, MHC Class II-positive, and CD138-negative." [ZFIN:ZDB-PUB-070221-3] synonym: "memory B lymphocyte" EXACT [] synonym: "memory B-cell" EXACT [] synonym: "memory B-lymphocyte" EXACT [] xref: CL:0000787 xref: TAO:0009333 xref: ZFIN:ZDB-ANAT-070308-266 is_a: ZFA:0009331 ! mature B cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009334 name: naive B cell namespace: zebrafish_anatomy def: "A naive B cell is a mature B cell that has the phenotype surface IgD-positive, surface IgM-positive, CD27-negative, and CD38-negative, and that has not yet been activated by antigen in the periphery." [CL:curator, IBSN:0781765196] synonym: "naive B lymphocyte" EXACT [] synonym: "naive B-cell" EXACT [] synonym: "naive B-lymphocyte" EXACT [] xref: CL:0000788 xref: TAO:0009334 xref: ZFIN:ZDB-ANAT-070308-267 is_a: ZFA:0009331 ! mature B cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009335 name: alpha-beta T cell namespace: zebrafish_anatomy def: "A T cell that expresses an alpha-beta T cell receptor complex." [ZFIN:ZDB-PUB-070221-3] synonym: "alpha-beta T lymphocyte" EXACT [] synonym: "alpha-beta T-cell" EXACT [] synonym: "alpha-beta T-lymphocyte" EXACT [] xref: CL:0000789 xref: TAO:0009335 xref: ZFIN:ZDB-ANAT-070308-268 is_a: ZFA:0009046 ! T cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009336 name: gamma-delta T cell namespace: zebrafish_anatomy def: "A T cell that expresses a gamma-delta T cell receptor complex." [ZFIN:ZDB-PUB-070221-3] comment: Note that gamma-delta T cell have both thymic and extrathymic differentiation pathways. synonym: "gamma-delta T lymphocyte" EXACT [] synonym: "gamma-delta T-cell" EXACT [] synonym: "gamma-delta T-lymphocyte" EXACT [] xref: CL:0000798 xref: TAO:0009336 xref: ZFIN:ZDB-ANAT-070308-269 is_a: ZFA:0009046 ! T cell relationship: develops_from ZFA:0009350 ! pro-T cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009337 name: immature gamma-delta T cell namespace: zebrafish_anatomy def: "A gamma-delta T cell that has an immature phenotype." [ZFIN:ZDB-PUB-070221-3] comment: Note that gamma-delta T cell have both thymic and extrathymic differentiation pathways. synonym: "immature gamma-delta T lymphocyte" EXACT [] synonym: "immature gamma-delta T-cell" EXACT [] synonym: "immature gamma-delta T-lymphocyte" EXACT [] xref: CL:0000799 xref: TAO:0009337 xref: ZFIN:ZDB-ANAT-070308-270 is_a: ZFA:0009336 ! gamma-delta T cell is_a: ZFA:0009340 ! immature T cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009338 name: mature gamma-delta T cell namespace: zebrafish_anatomy def: "A gamma-delta T cell that has a mature phenotype. These cells can be found in tissues and circulation where they express unique TCR repertoire depending on their location." [ZFIN:ZDB-PUB-070221-3] synonym: "mature gamma-delta T lymphocyte" EXACT [] synonym: "mature gamma-delta T-cell" EXACT [] synonym: "mature gamma-delta T-lymphocyte" EXACT [] xref: CL:0000800 xref: TAO:0009338 xref: ZFIN:ZDB-ANAT-070308-271 is_a: ZFA:0009336 ! gamma-delta T cell is_a: ZFA:0009341 ! mature T cell relationship: develops_from ZFA:0009337 ! immature gamma-delta T cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009339 name: gamma-delta intraepithelial T cell namespace: zebrafish_anatomy def: "A gamma-delta T cell of the columnar epithelium of the gastrointestinal tract. Intraepithelial T cells often have distinct developmental pathways and activation requirements." [ZFIN:ZDB-PUB-070221-3] synonym: "gamma-delta intraepithelial T lymphocyte" EXACT [] synonym: "gamma-delta intraepithelial T-cell" EXACT [] synonym: "gamma-delta intraepithelial T-lymphocyte" EXACT [] synonym: "IEL" RELATED [] synonym: "intraepithelial lymphocyte" RELATED [] xref: CL:0000801 xref: TAO:0009339 xref: ZFIN:ZDB-ANAT-070308-272 is_a: ZFA:0009338 ! mature gamma-delta T cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009340 name: immature T cell namespace: zebrafish_anatomy def: "An immature form of a T cell, a type of lymphocyte whose defining characteristic is the expression of a T cell receptor complex." [ZFIN:ZDB-PUB-070221-3] synonym: "immature T lymphocyte" EXACT [] synonym: "immature T-cell" EXACT [] synonym: "immature T-lymphocyte" EXACT [] xref: CL:0000804 xref: TAO:0009340 xref: ZFIN:ZDB-ANAT-070308-273 is_a: ZFA:0009046 ! T cell relationship: develops_from ZFA:0009350 ! pro-T cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009341 name: mature T cell namespace: zebrafish_anatomy def: "A mature form of a T cell, a type of lymphocyte whose defining characteristic is the expression of a T cell receptor complex." [ZFIN:ZDB-PUB-070221-3] synonym: "mature T lymphocyte" EXACT [] synonym: "mature T-cell" EXACT [] synonym: "mature T-lymphocyte" EXACT [] xref: CL:0000812 xref: TAO:0009341 xref: ZFIN:ZDB-ANAT-070308-274 is_a: ZFA:0009046 ! T cell relationship: develops_from ZFA:0009340 ! immature T cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009342 name: memory T cell namespace: zebrafish_anatomy def: "A distinctly differentiated long-lived T cell that has the phenotype CD45RO-positive and CD127-positive." [ZFIN:ZDB-PUB-070221-3] synonym: "memory T lymphocyte" EXACT [] synonym: "memory T-cell" EXACT [] synonym: "memory T-lymphocyte" EXACT [] xref: CL:0000813 xref: TAO:0009342 xref: ZFIN:ZDB-ANAT-070308-275 is_a: ZFA:0009046 ! T cell relationship: develops_from ZFA:0009341 ! mature T cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009343 name: immature B cell namespace: zebrafish_anatomy def: "An immature B cell is a precursor B cell that has the phenotype surface IgM-positive and surface IgD-negative, and have not undergone class immunoglobulin class switching or peripheral encounter with antigen and activation." [ZFIN:ZDB-PUB-070221-3] synonym: "immature B lymphocyte" EXACT [] synonym: "immature B-cell" EXACT [] synonym: "immature B-lymphocyte" EXACT [] synonym: "newly formed B Cell" EXACT [ZFIN:ZDB-PUB-070221-3] xref: CL:0000816 xref: TAO:0009343 xref: ZFIN:ZDB-ANAT-070308-276 is_a: ZFA:0009344 ! precursor B cell relationship: develops_from ZFA:0009349 ! pro-B cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009344 name: precursor B cell namespace: zebrafish_anatomy def: "A precursor B cell is a B cell with the phenotype CD10-positive." [ZFIN:ZDB-PUB-070221-3] synonym: "pre-B lymphocyte" EXACT [] xref: CL:0000817 xref: TAO:0009344 xref: ZFIN:ZDB-ANAT-070308-277 is_a: ZFA:0009142 ! B cell relationship: develops_from ZFA:0009349 ! pro-B cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009345 name: transitional stage B cell namespace: zebrafish_anatomy def: "An immature B cell of an intermediate stage between the pre-B cell stage and the mature nave stage. Transitional B cells express surface immunoglobulin, and are subject to the process of B cell selection." [ZFIN:ZDB-PUB-070221-3] synonym: "T1 B cell" RELATED [] synonym: "T2 B cell" RELATED [] synonym: "T3 B cell" RELATED [] synonym: "transitional stage B lymphocyte" EXACT [] synonym: "transitional stage B-cell" EXACT [] synonym: "transitional stage B-lymphocyte" EXACT [] xref: CL:0000818 xref: TAO:0009345 xref: ZFIN:ZDB-ANAT-070308-278 is_a: ZFA:0009142 ! B cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009346 name: immature natural killer cell namespace: zebrafish_anatomy def: "A natural killer cell that is developmentally immature, has the phenotype CD34-negative, CD117-positive, CD122-positive, and CD161-positive, and expresses additional natural killer cell receptors (NKR)." [ZFIN:ZDB-PUB-070221-3] synonym: "immature NK cell " EXACT [] synonym: "p-NK" RELATED [] xref: CL:0000823 xref: TAO:0009346 xref: ZFIN:ZDB-ANAT-070308-279 is_a: ZFA:0009278 ! natural killer cell relationship: develops_from ZFA:0009348 ! pro-NK cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009347 name: mature natural killer cell namespace: zebrafish_anatomy def: "A natural killer cell that is developmentally mature, has the phenotype CD16-positive, and expresses a variety of inhibitory and activating receptors that recognize NHC class I and other stress related molecules." [ZFIN:ZDB-PUB-070221-3] synonym: "LAK cell" RELATED [] synonym: "lymphokine activated killer cell" RELATED [] synonym: "mature NK cell" EXACT [] xref: CL:0000824 xref: TAO:0009347 xref: ZFIN:ZDB-ANAT-070308-280 is_a: ZFA:0009278 ! natural killer cell relationship: develops_from ZFA:0009346 ! immature natural killer cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009348 name: pro-NK cell namespace: zebrafish_anatomy def: "A progenitor committed to the natural killer cell lineage, expressing certain phenotypic markers of the natural killer cell lineage such as the IL-15 receptor, but lacking many of the phenotypic characteristics of later stages of natural killer cell development such as expression of NK activating and inhibitory molecules." [CL:curator] synonym: "natural killer cell progenitor" EXACT [] synonym: "NKP" EXACT [] synonym: "null cell" RELATED [] synonym: "preNK cell" RELATED [] synonym: "pro-natural killer cell" EXACT [] xref: CL:0000825 xref: TAO:0009348 xref: ZFIN:ZDB-ANAT-070308-281 is_a: ZFA:0009355 ! lymphoid progenitor cell relationship: develops_from ZFA:0009023 ! common lymphocyte progenitor relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009349 name: pro-B cell namespace: zebrafish_anatomy def: "A progenitor cell of the B cell lineage, with some lineage specific activity such as early stages of recombination of B cell receptor genes, but not yet fully committed to the B cell lineage until the expression of PAX5 occurs." [ZFIN:ZDB-PUB-070221-3] synonym: "pro-B lymphocyte" EXACT [] synonym: "pro-B-cell" EXACT [] synonym: "pro-B-lymphocyte" EXACT [] synonym: "progenitor B cell" EXACT [] xref: CL:0000826 xref: TAO:0009349 xref: ZFIN:ZDB-ANAT-070308-282 is_a: ZFA:0009355 ! lymphoid progenitor cell relationship: develops_from ZFA:0009023 ! common lymphocyte progenitor relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009350 name: pro-T cell namespace: zebrafish_anatomy def: "A progenitor cell of the T cell lineage, with some lineage specific marker expression, but not yet fully committed to the T cell lineage." [ZFIN:ZDB-PUB-070221-3] synonym: "DN1 cell" RELATED [] synonym: "DN1 thymocyte" RELATED [] synonym: "pro-T lymphocyte" EXACT [] synonym: "TN1 cell" RELATED [] xref: CL:0000827 xref: TAO:0009350 xref: ZFIN:ZDB-ANAT-050915-144 is_a: ZFA:0009355 ! lymphoid progenitor cell relationship: develops_from ZFA:0009023 ! common lymphocyte progenitor relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001078 ! thymus relationship: start ZFS:0000035 ! Larval:Protruding-mouth [Term] id: ZFA:0009351 name: thromboblast namespace: zebrafish_anatomy def: "A progenitor cell of the thrombocyte, a nucleated blood cell involved in coagulation typically seen in birds and other non-mammalian vertebrates." [CL:curator] comment: Note that this is a non-mammalian cell type. synonym: "thromboblasts" EXACT PLURAL [] xref: CL:0000828 xref: TAO:0009351 xref: ZFIN:ZDB-ANAT-070308-283 is_a: ZFA:0009356 ! myeloid progenitor cell relationship: develops_from ZFA:0009022 ! megakaryocyte erythroid progenitor cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009352 name: neutrophil progenitor cell namespace: zebrafish_anatomy def: "A progenitor cell of the neutrophil lineage." [ZFIN:ZDB-PUB-070221-1] synonym: "neutrophil stem cell" RELATED [] xref: CL:0000834 xref: TAO:0009352 xref: ZFIN:ZDB-ANAT-070308-284 is_a: ZFA:0009356 ! myeloid progenitor cell relationship: develops_from ZFA:0009251 ! granulocyte monocyte progenitor cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009353 name: myeloblast namespace: zebrafish_anatomy def: "The most primitive precursor in the granulocytic series, having fine, evenly distributed chromatin, several nucleoli, and a nongranular basophilic cytoplasm." [ZFIN:ZDB-PUB-070221-1] synonym: "myeloblasts" EXACT PLURAL [] xref: CL:0000835 xref: TAO:0009353 xref: ZFIN:ZDB-ANAT-070308-285 is_a: ZFA:0009356 ! myeloid progenitor cell relationship: develops_from ZFA:0009251 ! granulocyte monocyte progenitor cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009354 name: hematopoietic progenitor cell namespace: zebrafish_anatomy def: "A progenitor cell of any hematopoietic lineage, potentially multipotent." [CL:curator] comment: Note that this is a class of cell types, not an identified single cell type. synonym: "hemopoietic progenitor cell" EXACT [] xref: CL:0000837 xref: TAO:0009354 xref: ZFIN:ZDB-ANAT-070308-286 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009014 ! hematopoietic stem cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009355 name: lymphoid progenitor cell namespace: zebrafish_anatomy def: "A progenitor cell of any lymphoid lineage, potentially multipotent." [CL:curator] comment: Note that this is a class of cell types, not an identified single cell type. synonym: "lymphoid progenitor cells" EXACT PLURAL [] xref: CL:0000838 xref: TAO:0009355 xref: ZFIN:ZDB-ANAT-070308-287 is_a: ZFA:0009354 ! hematopoietic progenitor cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009356 name: myeloid progenitor cell namespace: zebrafish_anatomy def: "A progenitor cell of any myeloid lineage, potentially multipotent." [CL:curator] comment: Note that this is a class of cell types, not an identified single cell type. synonym: "myeloid progenitor cells" EXACT PLURAL [] xref: CL:0000839 xref: TAO:0009356 xref: ZFIN:ZDB-ANAT-070308-288 is_a: ZFA:0009354 ! hematopoietic progenitor cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009357 name: mononuclear cell namespace: zebrafish_anatomy def: "A leukocyte with a single non-segmented nucleus in the mature form." [CL:curator] synonym: "mononuclear cells" EXACT PLURAL [] xref: CL:0000842 xref: TAO:0009357 xref: ZFIN:ZDB-ANAT-070308-289 is_a: ZFA:0009309 ! leukocyte relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009358 name: ciliated olfactory receptor neuron namespace: zebrafish_anatomy def: "An olfactory receptor cell in which the apical ending of the dendrite is a pronounced ciliated olfactory knob." [ZFIN:ZDB-PUB-060724-7] synonym: "ciliated olfactory sensory neuron" EXACT [] synonym: "ciliated sensory neuron" EXACT [] xref: CL:0000847 xref: TAO:0009358 xref: ZFIN:ZDB-ANAT-070308-290 is_a: ZFA:0009125 ! olfactory receptor cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009359 name: microvillous olfactory receptor neuron namespace: zebrafish_anatomy def: "An olfactory receptor cell in which the apical ending of the dendrite is a knob that bears numerous microvilli." [ZFIN:ZDB-PUB-060724-7] synonym: "microvillous olfactory sensory neuron" EXACT [] synonym: "microvillous sensory neuron" RELATED [] xref: CL:0000848 xref: TAO:0009359 xref: ZFIN:ZDB-ANAT-070308-291 is_a: ZFA:0009125 ! olfactory receptor cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009360 name: crypt olfactory receptor neuron namespace: zebrafish_anatomy def: "An olfactory receptor cell with short cilia growing in an invagination bordered by microvilli." [ZFIN:ZDB-PUB-060724-7] synonym: "crypt cell" EXACT [] synonym: "crypt olfactory sensory neuron" EXACT [] synonym: "crypt sensory neuron" EXACT [] xref: CL:0000849 xref: TAO:0009360 xref: ZFIN:ZDB-ANAT-070308-292 is_a: ZFA:0009125 ! olfactory receptor cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009361 name: serotonergic neuron namespace: zebrafish_anatomy alt_id: ZFA:0009192 def: "A neuron that releases serotonin as a neurotransmitter." [CL:curator] synonym: "5-HT neuron" EXACT [] synonym: "5-hydroxytryptamine neuron" EXACT [] synonym: "serotinergic neuron" RELATED [] synonym: "serotinergic neurons" RELATED [] xref: CL:0000403 xref: CL:0000850 xref: TAO:0009192 xref: TAO:0009361 xref: ZFIN:ZDB-ANAT-070308-152 xref: ZFIN:ZDB-ANAT-070308-293 is_a: ZFA:0009248 ! neuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009362 name: neuromast mantle cell namespace: zebrafish_anatomy def: "Neuromast mantle cell is a non-sensory cell. Neuromast mantle cells surround the neuromast support cells and neuromast hair cells, separating the neuromast from the epidermis, and secrete cupula in which the ciliary bundles of all the hair cells are embedded." [ZFIN:ZDB-PUB-070221-7] synonym: "neuromast mantle cells" EXACT PLURAL [] xref: CL:0000851 xref: TAO:0009362 xref: ZFIN:ZDB-ANAT-070308-294 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000243 ! neuromast relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0009363 name: neuromast support cell namespace: zebrafish_anatomy def: "Neuromast support cell is a non-sensory cell of the neuromast that extend between the sensory hair cells from the basement membrane to the apical surface; neuromast support cells are surrounded by neuromast mantle cells." [ZFIN:ZDB-PUB-070221-7] synonym: "neuromast support cells" EXACT PLURAL [] xref: CL:0000852 xref: TAO:0009363 xref: ZFIN:ZDB-ANAT-070308-295 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000243 ! neuromast relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0009364 name: olfactory epithelial support cell namespace: zebrafish_anatomy def: "Olfactory epithelial support cell is a non ciliated columnar cell that extends from the epithelial free margin to the basement membrane of the olfactory epithelium." [CL:curator] synonym: "olfactory sustentacular cell" EXACT [] xref: CL:0000853 xref: TAO:0009364 xref: ZFIN:ZDB-ANAT-070308-296 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009365 name: interneuromast cell namespace: zebrafish_anatomy def: "Interneuromast cell is a neuroectodermal cell deposited by the migrating lateral line primordium between the neuromasts. Interneuromast cells proliferate and migrate to form additional neuromasts." [CL:curator] synonym: "interneuromast cells" EXACT PLURAL [] xref: CL:0000854 xref: TAO:0009365 xref: ZFIN:ZDB-ANAT-050711-65 is_a: ZFA:0009080 ! neurectodermal cell relationship: develops_from ZFA:0009012 ! neuroplacodal cell relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0000034 ! lateral line system relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0009366 name: hair cell namespace: zebrafish_anatomy def: "Hair cell is a mechanoreceptor cell that is sensitive to movement of the hair-like projections (stereocilia and kinocilia) which relay the information centrally in the nervous system." [CL:curator] synonym: "hair cells" EXACT PLURAL [] xref: CL:0000855 xref: TAO:0009366 xref: ZFIN:ZDB-ANAT-070308-297 is_a: ZFA:0009120 ! mechanoreceptor cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009367 name: neuromast hair cell namespace: zebrafish_anatomy def: "Neuromast hair cell is a hair cell that acts as a sensory receptor of the neuromast; it is morphologically polarized as a result of the relative position of the single kinocilium and the clusters of stereocilia on its apical surface." [CL:curator] synonym: "neuromast hair cells" EXACT PLURAL [] xref: CL:0000856 xref: TAO:0009367 xref: ZFIN:ZDB-ANAT-070308-298 is_a: ZFA:0009366 ! hair cell relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000243 ! neuromast relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009368 name: slow muscle myoblast namespace: zebrafish_anatomy def: "A skeletal muscle myoblast that differentiates into slow muscle fibers." [CL:curator] synonym: "slow muscle myoblasts" EXACT PLURAL [] xref: CL:0000857 xref: TAO:0009368 xref: ZFIN:ZDB-ANAT-070308-299 is_a: ZFA:0009236 ! skeletal muscle myoblast relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009369 name: fast muscle myoblast namespace: zebrafish_anatomy def: "A skeletal muscle myoblast that differentiates into fast muscle fibers." [CL:curator] synonym: "fast muscle myoblasts" EXACT PLURAL [] xref: CL:0000858 xref: TAO:0009369 xref: ZFIN:ZDB-ANAT-070308-300 is_a: ZFA:0009236 ! skeletal muscle myoblast relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009370 name: stretch receptor cell namespace: zebrafish_anatomy synonym: "stretch receptor cells" EXACT PLURAL [] xref: CL:1000082 xref: TAO:0009370 xref: ZFIN:ZDB-ANAT-070308-301 is_a: ZFA:0009001 ! receptor cell (sensu Animalia) relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009371 name: stratified keratinized epithelial stem cell namespace: zebrafish_anatomy synonym: "stratified keratinized epithelial stem cells" EXACT PLURAL [] xref: CL:1000083 xref: TAO:0009371 xref: ZFIN:ZDB-ANAT-070308-302 is_a: ZFA:0009180 ! stratified epithelial stem cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0100000 name: zebrafish anatomical entity namespace: zebrafish_anatomy [Term] id: ZFS:0000000 name: Unknown namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-050211-1 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000001 name: Zygote:1-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-4 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000002 name: Cleavage:2-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-15 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000003 name: Cleavage:4-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-11 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000004 name: Cleavage:8-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-33 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000005 name: Cleavage:16-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-20 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000006 name: Cleavage:32-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-25 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000007 name: Cleavage:64-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-28 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000008 name: Blastula:128-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-7 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000009 name: Blastula:256-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-1 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000010 name: Blastula:512-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-14 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000011 name: Blastula:1k-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-22 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000012 name: Blastula:High namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-27 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000013 name: Blastula:Oblong namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-24 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000014 name: Blastula:Sphere namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-21 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000015 name: Blastula:Dome namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-19 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000016 name: Blastula:30%-epiboly namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-17 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000017 name: Gastrula:50%-epiboly namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-6 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000018 name: Gastrula:Germ-ring namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-3 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000019 name: Gastrula:Shield namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-2 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000020 name: Gastrula:75%-epiboly namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-18 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000021 name: Gastrula:90%-epiboly namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-29 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000022 name: Gastrula:Bud namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-12 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000023 name: Segmentation:1-4 somites namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-23 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000024 name: Segmentation:5-9 somites namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-5 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000025 name: Segmentation:10-13 somites namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-020626-1 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000026 name: Segmentation:14-19 somites namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-30 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000027 name: Segmentation:20-25 somites namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-16 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000028 name: Segmentation:26+ somites namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-34 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000029 name: Pharyngula:Prim-5 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-10 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000030 name: Pharyngula:Prim-15 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-32 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000031 name: Pharyngula:Prim-25 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-13 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000032 name: Pharyngula:High-pec namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-31 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000033 name: Hatching:Long-pec namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-9 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000034 name: Hatching:Pec-fin namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-26 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000035 name: Larval:Protruding-mouth namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-8 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000036 name: Larval:Day 4 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-35 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000037 name: Larval:Day 5 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-36 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000038 name: Larval:Day 6 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-37 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000039 name: Larval:Days 7-13 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-47 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000040 name: Larval:Days 14-20 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-48 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000041 name: Larval:Days 21-29 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-49 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000042 name: Juvenile:Days 30-44 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-51 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000043 name: Juvenile:Days 45-89 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-52 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000044 name: Adult namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-39 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0100000 name: Stages namespace: zebrafish_stages [Typedef] id: develops_from name: develops from is_transitive: true [Typedef] id: end name: end stage [Typedef] id: part_of name: part of is_transitive: true [Typedef] id: start name: start stage