1075 22 0 http://edamontology.org/data_0899 Protein structural motifs and surfaces 'Protein structural motifs and surfaces' SubClassOf 'Obsolete concept (EDAM)' 'Protein structural motifs and surfaces' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_0894 Amino acid annotation 'Amino acid annotation' SubClassOf 'Obsolete concept (EDAM)' 'Amino acid annotation' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_0895 Peptide annotation 'Peptide annotation' SubClassOf 'Obsolete concept (EDAM)' 'Peptide annotation' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_0891 Sequence-3D profile alignment 'Sequence-3D profile alignment' SubClassOf 'Obsolete concept (EDAM)' 'Sequence-3D profile alignment' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_0876 Protein features report (secondary structure) 'Protein features report (secondary structure)' SubClassOf 'Obsolete concept (EDAM)' 'Protein features report (secondary structure)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_0877 Protein features report (super-secondary) 'Protein features report (super-secondary)' SubClassOf 'Obsolete concept (EDAM)' 'Protein features report (super-secondary)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_0875 Protein topology 'Protein topology' SubClassOf 'Obsolete concept (EDAM)' 'Protein topology' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_0879 Secondary structure alignment metadata (protein) 'Secondary structure alignment metadata (protein)' SubClassOf 'Obsolete concept (EDAM)' 'Secondary structure alignment metadata (protein)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_0885 Structure database search results 'Structure database search results' SubClassOf 'Obsolete concept (EDAM)' 'Structure database search results' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_0889 Structural profile 'Structural profile' SubClassOf 'has topic' some 'Structure comparison' 'Structural profile' SubClassOf 'has topic' some 'Structure analysis' http://edamontology.org/data_0882 Secondary structure alignment metadata (RNA) 'Secondary structure alignment metadata (RNA)' SubClassOf 'Obsolete concept (EDAM)' 'Secondary structure alignment metadata (RNA)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_0884 Tertiary structure record 'Tertiary structure record' SubClassOf 'Obsolete concept (EDAM)' 'Tertiary structure record' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1703 ChEBI entry format 'ChEBI entry format' SubClassOf 'Obsolete concept (EDAM)' 'ChEBI entry format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1702 ChemSpider entry format 'ChemSpider entry format' SubClassOf 'Obsolete concept (EDAM)' 'ChemSpider entry format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1701 PubChem entry format 'PubChem entry format' SubClassOf 'Obsolete concept (EDAM)' 'PubChem entry format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1700 KEGG GLYCAN entry format 'KEGG GLYCAN entry format' SubClassOf 'Obsolete concept (EDAM)' 'KEGG GLYCAN entry format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1565 Protein-protein interaction report 'Protein-protein interaction report' SubClassOf 'Obsolete concept (EDAM)' 'Protein-protein interaction report' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1564 Protein fold recognition report 'Protein fold recognition report' SubClassOf 'Obsolete concept (EDAM)' 'Protein fold recognition report' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1561 CATH functional category 'CATH functional category' SubClassOf 'Obsolete concept (EDAM)' 'CATH functional category' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1560 CATH structurally similar group 'CATH structurally similar group' SubClassOf 'Obsolete concept (EDAM)' 'CATH structurally similar group' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1706 KEGG DRUG entry format 'KEGG DRUG entry format' SubClassOf 'Obsolete concept (EDAM)' 'KEGG DRUG entry format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1567 Protein-nucleic acid interactions report 'Protein-nucleic acid interactions report' SubClassOf 'Obsolete concept (EDAM)' 'Protein-nucleic acid interactions report' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1704 MSDchem ligand dictionary entry format 'MSDchem ligand dictionary entry format' SubClassOf 'Obsolete concept (EDAM)' 'MSDchem ligand dictionary entry format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1591 Vienna RNA parameters 'Vienna RNA parameters' SubClassOf 'Obsolete concept (EDAM)' 'Vienna RNA parameters' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1592 Vienna RNA structure constraints 'Vienna RNA structure constraints' SubClassOf 'Obsolete concept (EDAM)' 'Vienna RNA structure constraints' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1593 Vienna RNA concentration data 'Vienna RNA concentration data' SubClassOf 'Obsolete concept (EDAM)' 'Vienna RNA concentration data' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1594 Vienna RNA calculated energy 'Vienna RNA calculated energy' SubClassOf 'Obsolete concept (EDAM)' 'Vienna RNA calculated energy' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1599 Codon adaptation index 'Codon adaptation index' SubClassOf 'Obsolete concept (EDAM)' 'Codon adaptation index' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1586 Nucleic acid melting temperature 'Nucleic acid melting temperature' SubClassOf 'Obsolete concept (EDAM)' 'Nucleic acid melting temperature' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_0005 Resource type 'Resource type' SubClassOf 'Obsolete concept (EDAM)' 'Resource type' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_0007 Tool 'Tool' SubClassOf 'Obsolete concept (EDAM)' 'Tool' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_2197 OWL format 'OWL format' SubClassOf 'Ontology format' http://edamontology.org/format_2188 UniProt format 'UniProt format' SubClassOf 'Obsolete concept (EDAM)' 'UniProt format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_2189 ipi 'ipi' SubClassOf 'Obsolete concept (EDAM)' 'ipi' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1747 PDB atom record format 'PDB atom record format' SubClassOf 'Obsolete concept (EDAM)' 'PDB atom record format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1760 CATH chain report format 'CATH chain report format' SubClassOf 'Obsolete concept (EDAM)' 'CATH chain report format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1761 CATH PDB report format 'CATH PDB report format' SubClassOf 'Obsolete concept (EDAM)' 'CATH PDB report format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_0851 Sequence mask character 'Sequence mask character' SubClassOf 'Obsolete concept (EDAM)' 'Sequence mask character' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_0859 Sequence signature model 'Sequence signature model' SubClassOf 'Obsolete concept (EDAM)' 'Sequence signature model' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_0852 Sequence mask type 'Sequence mask type' SubClassOf 'Obsolete concept (EDAM)' 'Sequence mask type' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_0855 Sequence metadata 'Sequence metadata' SubClassOf 'Obsolete concept (EDAM)' 'Sequence metadata' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_0854 Sequence length specification 'Sequence length specification' SubClassOf 'Obsolete concept (EDAM)' 'Sequence length specification' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_2159 Gene features (coding region) format 'Gene features (coding region) format' SubClassOf 'Obsolete concept (EDAM)' 'Gene features (coding region) format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_0861 Sequence alignment (words) 'Sequence alignment (words)' SubClassOf 'Obsolete concept (EDAM)' 'Sequence alignment (words)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_0866 Sequence alignment metadata 'Sequence alignment metadata' SubClassOf 'Obsolete concept (EDAM)' 'Sequence alignment metadata' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_0864 Sequence alignment parameter 'Sequence alignment parameter' SubClassOf 'Obsolete concept (EDAM)' 'Sequence alignment parameter' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1782 NCBI gene report format 'NCBI gene report format' SubClassOf 'Obsolete concept (EDAM)' 'NCBI gene report format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_0831 MeSH vocabulary 'MeSH vocabulary' SubClassOf 'Obsolete concept (EDAM)' 'MeSH vocabulary' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_0832 HGNC vocabulary 'HGNC vocabulary' SubClassOf 'Obsolete concept (EDAM)' 'HGNC vocabulary' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_0835 UMLS vocabulary 'UMLS vocabulary' SubClassOf 'Obsolete concept (EDAM)' 'UMLS vocabulary' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_2175 Gene cluster format 'Gene cluster format' SubClassOf 'Obsolete concept (EDAM)' 'Gene cluster format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_0843 Database entry 'Database entry' SubClassOf 'Obsolete concept (EDAM)' 'Database entry' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2993 Molecular interaction data processing 'Molecular interaction data processing' SubClassOf 'Obsolete concept (EDAM)' 'Molecular interaction data processing' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1431 Phylogenetic property values format 'Phylogenetic property values format' SubClassOf 'Obsolete concept (EDAM)' 'Phylogenetic property values format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0922 Primers 'Primers' SubClassOf 'Gene transcription features' 'Primers' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2948 Molecular interaction analysis 'Molecular interaction analysis' SubClassOf 'Obsolete concept (EDAM)' 'Molecular interaction analysis' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2364 2D PAGE report '2D PAGE report' SubClassOf 'Obsolete concept (EDAM)' '2D PAGE report' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2363 2D PAGE data '2D PAGE data' SubClassOf 'Obsolete concept (EDAM)' '2D PAGE data' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2360 Domain-domain interaction (indirect) 'Domain-domain interaction (indirect)' SubClassOf 'Obsolete concept (EDAM)' 'Domain-domain interaction (indirect)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2952 Structure alignment processing 'Structure alignment processing' SubClassOf 'Obsolete concept (EDAM)' 'Structure alignment processing' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2951 Alignment processing 'Alignment processing' SubClassOf 'Obsolete concept (EDAM)' 'Alignment processing' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2359 Domain-domain interactions 'Domain-domain interactions' SubClassOf 'Obsolete concept (EDAM)' 'Domain-domain interactions' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2358 Domain-nucleic acid interaction report 'Domain-nucleic acid interaction report' SubClassOf 'Obsolete concept (EDAM)' 'Domain-nucleic acid interaction report' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2357 Protein signature type 'Protein signature type' SubClassOf 'Obsolete concept (EDAM)' 'Protein signature type' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_3563 RNA-seq read count analysis 'RNA-seq read count analysis' SubClassOf 'Nucleic acid sequence analysis' 'RNA-seq read count analysis' SubClassOf http://edamontology.org/operation_3680 http://edamontology.org/operation_3565 RNA-seq time series data analysis 'RNA-seq time series data analysis' SubClassOf 'Nucleic acid sequence analysis' 'RNA-seq time series data analysis' SubClassOf http://edamontology.org/operation_3680 http://edamontology.org/operation_2946 Alignment analysis 'Alignment analysis' SubClassOf 'Obsolete concept (EDAM)' 'Alignment analysis' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2300 Gene name (NCBI) 'Gene name (NCBI)' SubClassOf 'Obsolete concept (EDAM)' 'Gene name (NCBI)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2307 Virus annotation 'Virus annotation' SubClassOf 'Obsolete concept (EDAM)' 'Virus annotation' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2308 Virus annotation (taxonomy) 'Virus annotation (taxonomy)' SubClassOf 'Obsolete concept (EDAM)' 'Virus annotation (taxonomy)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2932 Hopp and Woods plotting 'Hopp and Woods plotting' SubClassOf 'Obsolete concept (EDAM)' 'Hopp and Woods plotting' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2931 Secondary structure comparison 'Secondary structure comparison' SubClassOf 'has topic' some 'Structure comparison' 'Secondary structure comparison' SubClassOf 'has topic' some 'Structure analysis' http://edamontology.org/data_0901 Protein features report (domains) 'Protein features report (domains)' SubClassOf 'Obsolete concept (EDAM)' 'Protein features report (domains)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_0900 Protein domain classification 'Protein domain classification' SubClassOf 'Obsolete concept (EDAM)' 'Protein domain classification' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_0903 Protein folding report 'Protein folding report' SubClassOf 'Obsolete concept (EDAM)' 'Protein folding report' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_0902 Protein architecture report 'Protein architecture report' SubClassOf 'Obsolete concept (EDAM)' 'Protein architecture report' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1536 MHC peptide immunogenicity report 'MHC peptide immunogenicity report' SubClassOf 'Obsolete concept (EDAM)' 'MHC peptide immunogenicity report' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1533 Protein subcellular localization 'Protein subcellular localization' SubClassOf 'Obsolete concept (EDAM)' 'Protein subcellular localization' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1541 Protein flexibility or motion report 'Protein flexibility or motion report' SubClassOf 'Obsolete concept (EDAM)' 'Protein flexibility or motion report' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1543 Protein surface report 'Protein surface report' SubClassOf 'Obsolete concept (EDAM)' 'Protein surface report' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1540 Protein non-covalent interactions report 'Protein non-covalent interactions report' SubClassOf 'Obsolete concept (EDAM)' 'Protein non-covalent interactions report' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1559 CATH homologous superfamily 'CATH homologous superfamily' SubClassOf 'Obsolete concept (EDAM)' 'CATH homologous superfamily' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1558 CATH topology 'CATH topology' SubClassOf 'Obsolete concept (EDAM)' 'CATH topology' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1557 CATH architecture 'CATH architecture' SubClassOf 'Obsolete concept (EDAM)' 'CATH architecture' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1556 CATH class 'CATH class' SubClassOf 'Obsolete concept (EDAM)' 'CATH class' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1555 EMBASSY domain classification 'EMBASSY domain classification' SubClassOf 'Obsolete concept (EDAM)' 'EMBASSY domain classification' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1554 SCOP node 'SCOP node' SubClassOf 'Obsolete concept (EDAM)' 'SCOP node' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1553 CATH node 'CATH node' SubClassOf 'Obsolete concept (EDAM)' 'CATH node' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1550 Protein non-canonical interactions 'Protein non-canonical interactions' SubClassOf 'Obsolete concept (EDAM)' 'Protein non-canonical interactions' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2381 Experiment report (genotyping) 'Experiment report (genotyping)' SubClassOf 'Obsolete concept (EDAM)' 'Experiment report (genotyping)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_3545 Mathematical modelling 'Mathematical modelling' SubClassOf 'Obsolete concept (EDAM)' 'Mathematical modelling' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2372 2D PAGE spot report '2D PAGE spot report' SubClassOf 'Obsolete concept (EDAM)' '2D PAGE spot report' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2378 Protein-motif interaction 'Protein-motif interaction' SubClassOf 'Obsolete concept (EDAM)' 'Protein-motif interaction' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_3427 RNAi report 'RNAi report' SubClassOf 'Obsolete concept (EDAM)' 'RNAi report' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_3426 Proteomics experiment report 'Proteomics experiment report' SubClassOf 'Obsolete concept (EDAM)' 'Proteomics experiment report' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_3428 Simulation experiment report 'Simulation experiment report' SubClassOf 'Obsolete concept (EDAM)' 'Simulation experiment report' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1517 Restriction enzyme report 'Restriction enzyme report' SubClassOf 'Obsolete concept (EDAM)' 'Restriction enzyme report' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2399 Gene transcriptional features report 'Gene transcriptional features report' SubClassOf 'Obsolete concept (EDAM)' 'Gene transcriptional features report' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2397 Gene features report (exon) 'Gene features report (exon)' SubClassOf 'Obsolete concept (EDAM)' 'Gene features report (exon)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2395 Fungi annotation 'Fungi annotation' SubClassOf 'Obsolete concept (EDAM)' 'Fungi annotation' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2396 Fungi annotation (anamorph) 'Fungi annotation (anamorph)' SubClassOf 'Obsolete concept (EDAM)' 'Fungi annotation (anamorph)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1509 Enzyme report 'Enzyme report' SubClassOf 'Obsolete concept (EDAM)' 'Enzyme report' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_2230 Classification 'Classification' SubClassOf 'Obsolete concept (EDAM)' 'Classification' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_2232 Lipoproteins 'Lipoproteins' SubClassOf 'Obsolete concept (EDAM)' 'Lipoproteins' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_2243 phylip property values 'phylip property values' SubClassOf 'Obsolete concept (EDAM)' 'phylip property values' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_2225 Protein databases 'Protein databases' SubClassOf 'Obsolete concept (EDAM)' 'Protein databases' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_2226 Structure determination 'Structure determination' SubClassOf 'Obsolete concept (EDAM)' 'Structure determination' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1490 Multiple protein tertiary structure alignment (C-alpha atoms) 'Multiple protein tertiary structure alignment (C-alpha atoms)' SubClassOf 'Obsolete concept (EDAM)' 'Multiple protein tertiary structure alignment (C-alpha atoms)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1491 Structure alignment (nucleic acid pair) 'Structure alignment (nucleic acid pair)' SubClassOf 'Obsolete concept (EDAM)' 'Structure alignment (nucleic acid pair)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1492 Multiple nucleic acid tertiary structure alignment 'Multiple nucleic acid tertiary structure alignment' SubClassOf 'Obsolete concept (EDAM)' 'Multiple nucleic acid tertiary structure alignment' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1496 Molecular similarity score 'Molecular similarity score' SubClassOf 'Obsolete concept (EDAM)' 'Molecular similarity score' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1495 DaliLite hit table 'DaliLite hit table' SubClassOf 'Obsolete concept (EDAM)' 'DaliLite hit table' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1480 Structure alignment (multiple) 'Structure alignment (multiple)' SubClassOf 'Obsolete concept (EDAM)' 'Structure alignment (multiple)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1489 Multiple protein tertiary structure alignment (all atoms) 'Multiple protein tertiary structure alignment (all atoms)' SubClassOf 'Obsolete concept (EDAM)' 'Multiple protein tertiary structure alignment (all atoms)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1488 Pairwise protein tertiary structure alignment (C-alpha atoms) 'Pairwise protein tertiary structure alignment (C-alpha atoms)' SubClassOf 'Obsolete concept (EDAM)' 'Pairwise protein tertiary structure alignment (C-alpha atoms)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1487 Pairwise protein tertiary structure alignment (all atoms) 'Pairwise protein tertiary structure alignment (all atoms)' SubClassOf 'Obsolete concept (EDAM)' 'Pairwise protein tertiary structure alignment (all atoms)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1486 Structure alignment (protein C-alpha atoms) 'Structure alignment (protein C-alpha atoms)' SubClassOf 'Obsolete concept (EDAM)' 'Structure alignment (protein C-alpha atoms)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1485 Structure alignment (protein all atoms) 'Structure alignment (protein all atoms)' SubClassOf 'Obsolete concept (EDAM)' 'Structure alignment (protein all atoms)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1484 Multiple protein tertiary structure alignment 'Multiple protein tertiary structure alignment' SubClassOf 'Obsolete concept (EDAM)' 'Multiple protein tertiary structure alignment' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1483 Structure alignment (protein pair) 'Structure alignment (protein pair)' SubClassOf 'Obsolete concept (EDAM)' 'Structure alignment (protein pair)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_2210 Strain data format 'Strain data format' SubClassOf 'Obsolete concept (EDAM)' 'Strain data format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_2211 CIP strain data format 'CIP strain data format' SubClassOf 'Obsolete concept (EDAM)' 'CIP strain data format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_2271 Structure database search 'Structure database search' SubClassOf 'Obsolete concept (EDAM)' 'Structure database search' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_2278 Transmembrane protein prediction 'Transmembrane protein prediction' SubClassOf 'Obsolete concept (EDAM)' 'Transmembrane protein prediction' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_2277 SNP 'SNP' SubClassOf 'DNA polymorphism' 'SNP' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_2276 Protein function prediction 'Protein function prediction' SubClassOf 'Obsolete concept (EDAM)' 'Protein function prediction' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1471 Protein chain (all atoms) 'Protein chain (all atoms)' SubClassOf 'Obsolete concept (EDAM)' 'Protein chain (all atoms)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1472 Protein chain (C-alpha atoms) 'Protein chain (C-alpha atoms)' SubClassOf 'Obsolete concept (EDAM)' 'Protein chain (C-alpha atoms)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1473 Protein domain (all atoms) 'Protein domain (all atoms)' SubClassOf 'Obsolete concept (EDAM)' 'Protein domain (all atoms)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1474 Protein domain (C-alpha atoms) 'Protein domain (C-alpha atoms)' SubClassOf 'Obsolete concept (EDAM)' 'Protein domain (C-alpha atoms)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_2202 Sequence record full format 'Sequence record full format' SubClassOf 'Obsolete concept (EDAM)' 'Sequence record full format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_2203 Sequence record lite format 'Sequence record lite format' SubClassOf 'Obsolete concept (EDAM)' 'Sequence record lite format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1604 DictyBase gene report format 'DictyBase gene report format' SubClassOf 'Obsolete concept (EDAM)' 'DictyBase gene report format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1603 Ensembl gene report format 'Ensembl gene report format' SubClassOf 'Obsolete concept (EDAM)' 'Ensembl gene report format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1607 EcoCyc gene report format 'EcoCyc gene report format' SubClassOf 'Obsolete concept (EDAM)' 'EcoCyc gene report format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1608 FlyBase gene report format 'FlyBase gene report format' SubClassOf 'Obsolete concept (EDAM)' 'FlyBase gene report format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1605 CGD gene report format 'CGD gene report format' SubClassOf 'Obsolete concept (EDAM)' 'CGD gene report format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1469 Protein structure (all atoms) 'Protein structure (all atoms)' SubClassOf 'Obsolete concept (EDAM)' 'Protein structure (all atoms)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1606 DragonDB gene report format 'DragonDB gene report format' SubClassOf 'Obsolete concept (EDAM)' 'DragonDB gene report format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1609 Gramene gene report format 'Gramene gene report format' SubClassOf 'Obsolete concept (EDAM)' 'Gramene gene report format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_2257 Phylogeny visualisation 'Phylogeny visualisation' SubClassOf 'Obsolete concept (EDAM)' 'Phylogeny visualisation' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1453 Amino acid comparison matrix (floats) 'Amino acid comparison matrix (floats)' SubClassOf 'Obsolete concept (EDAM)' 'Amino acid comparison matrix (floats)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1456 Protein features report (membrane regions) 'Protein features report (membrane regions)' SubClassOf 'Obsolete concept (EDAM)' 'Protein features report (membrane regions)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1450 Nucleotide comparison matrix (integers) 'Nucleotide comparison matrix (integers)' SubClassOf 'Obsolete concept (EDAM)' 'Nucleotide comparison matrix (integers)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1451 Nucleotide comparison matrix (floats) 'Nucleotide comparison matrix (floats)' SubClassOf 'Obsolete concept (EDAM)' 'Nucleotide comparison matrix (floats)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1452 Amino acid comparison matrix (integers) 'Amino acid comparison matrix (integers)' SubClassOf 'Obsolete concept (EDAM)' 'Amino acid comparison matrix (integers)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1446 Comparison matrix (integers) 'Comparison matrix (integers)' SubClassOf 'Obsolete concept (EDAM)' 'Comparison matrix (integers)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1447 Comparison matrix (floats) 'Comparison matrix (floats)' SubClassOf 'Obsolete concept (EDAM)' 'Comparison matrix (floats)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1443 Phylogenetic tree report (tree stratigraphic) 'Phylogenetic tree report (tree stratigraphic)' SubClassOf 'Obsolete concept (EDAM)' 'Phylogenetic tree report (tree stratigraphic)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1440 Phylogenetic tree report (tree shape) 'Phylogenetic tree report (tree shape)' SubClassOf 'Obsolete concept (EDAM)' 'Phylogenetic tree report (tree shape)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1441 Phylogenetic tree report (tree evaluation) 'Phylogenetic tree report (tree evaluation)' SubClassOf 'Obsolete concept (EDAM)' 'Phylogenetic tree report (tree evaluation)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1649 HumanCyc entry format 'HumanCyc entry format' SubClassOf 'Obsolete concept (EDAM)' 'HumanCyc entry format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1513 KEGG REACTION enzyme report format 'KEGG REACTION enzyme report format' SubClassOf 'Obsolete concept (EDAM)' 'KEGG REACTION enzyme report format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1514 KEGG ENZYME enzyme report format 'KEGG ENZYME enzyme report format' SubClassOf 'Obsolete concept (EDAM)' 'KEGG ENZYME enzyme report format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1515 REBASE proto enzyme report format 'REBASE proto enzyme report format' SubClassOf 'Obsolete concept (EDAM)' 'REBASE proto enzyme report format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1516 REBASE withrefm enzyme report format 'REBASE withrefm enzyme report format' SubClassOf 'Obsolete concept (EDAM)' 'REBASE withrefm enzyme report format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2400 Toxin annotation 'Toxin annotation' SubClassOf 'Obsolete concept (EDAM)' 'Toxin annotation' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1645 EMDB entry format 'EMDB entry format' SubClassOf 'Obsolete concept (EDAM)' 'EMDB entry format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2402 Protein-drug interaction report 'Protein-drug interaction report' SubClassOf 'Obsolete concept (EDAM)' 'Protein-drug interaction report' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1511 IntEnz enzyme report format 'IntEnz enzyme report format' SubClassOf 'Obsolete concept (EDAM)' 'IntEnz enzyme report format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1647 KEGG PATHWAY entry format 'KEGG PATHWAY entry format' SubClassOf 'Obsolete concept (EDAM)' 'KEGG PATHWAY entry format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2401 Protein report (membrane protein) 'Protein report (membrane protein)' SubClassOf 'Obsolete concept (EDAM)' 'Protein report (membrane protein)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1512 BRENDA enzyme report format 'BRENDA enzyme report format' SubClassOf 'Obsolete concept (EDAM)' 'BRENDA enzyme report format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1648 MetaCyc entry format 'MetaCyc entry format' SubClassOf 'Obsolete concept (EDAM)' 'MetaCyc entry format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1640 ArrayExpress entry format 'ArrayExpress entry format' SubClassOf 'Obsolete concept (EDAM)' 'ArrayExpress entry format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1619 TIGR gene report format 'TIGR gene report format' SubClassOf 'Obsolete concept (EDAM)' 'TIGR gene report format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1618 ZFIN gene report format 'ZFIN gene report format' SubClassOf 'Obsolete concept (EDAM)' 'ZFIN gene report format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1617 WormBase gene report format 'WormBase gene report format' SubClassOf 'Obsolete concept (EDAM)' 'WormBase gene report format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1616 TAIR gene report format 'TAIR gene report format' SubClassOf 'Obsolete concept (EDAM)' 'TAIR gene report format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1500 Domainatrix 3D-1D scoring matrix format 'Domainatrix 3D-1D scoring matrix format' SubClassOf 'Obsolete concept (EDAM)' 'Domainatrix 3D-1D scoring matrix format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1614 SGD gene report format 'SGD gene report format' SubClassOf 'Obsolete concept (EDAM)' 'SGD gene report format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1615 GeneDB gene report format 'GeneDB gene report format' SubClassOf 'Obsolete concept (EDAM)' 'GeneDB gene report format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1612 MGD gene report format 'MGD gene report format' SubClassOf 'Obsolete concept (EDAM)' 'MGD gene report format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1613 RGD gene report format 'RGD gene report format' SubClassOf 'Obsolete concept (EDAM)' 'RGD gene report format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1610 KEGG GENES gene report format 'KEGG GENES gene report format' SubClassOf 'Obsolete concept (EDAM)' 'KEGG GENES gene report format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1611 MaizeGDB gene report format 'MaizeGDB gene report format' SubClassOf 'Obsolete concept (EDAM)' 'MaizeGDB gene report format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1623 OMIM entry format 'OMIM entry format' SubClassOf 'Obsolete concept (EDAM)' 'OMIM entry format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1624 HGVbase entry format 'HGVbase entry format' SubClassOf 'Obsolete concept (EDAM)' 'HGVbase entry format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1625 HIVDB entry format 'HIVDB entry format' SubClassOf 'Obsolete concept (EDAM)' 'HIVDB entry format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1626 KEGG DISEASE entry format 'KEGG DISEASE entry format' SubClassOf 'Obsolete concept (EDAM)' 'KEGG DISEASE entry format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1620 dbSNP polymorphism report format 'dbSNP polymorphism report format' SubClassOf 'Obsolete concept (EDAM)' 'dbSNP polymorphism report format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_2280 Nucleic acid structure comparison 'Nucleic acid structure comparison' SubClassOf 'Obsolete concept (EDAM)' 'Nucleic acid structure comparison' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1563 SMART domain assignment report format 'SMART domain assignment report format' SubClassOf 'Obsolete concept (EDAM)' 'SMART domain assignment report format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1569 IntAct entry format 'IntAct entry format' SubClassOf 'Obsolete concept (EDAM)' 'IntAct entry format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1568 BIND entry format 'BIND entry format' SubClassOf 'Obsolete concept (EDAM)' 'BIND entry format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0079 Metabolites 'Metabolites' SubClassOf 'Small molecules' 'Metabolites' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0078 Proteins 'Proteins' SubClassOf 'Biochemistry' 'Proteins' SubClassOf 'Computational biology' http://edamontology.org/topic_0077 Nucleic acids 'Nucleic acids' SubClassOf 'Biochemistry' 'Nucleic acids' SubClassOf 'Computational biology' http://edamontology.org/format_1651 PATIKA entry format 'PATIKA entry format' SubClassOf 'Obsolete concept (EDAM)' 'PATIKA entry format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1650 INOH entry format 'INOH entry format' SubClassOf 'Obsolete concept (EDAM)' 'INOH entry format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0084 Phylogeny 'Phylogeny' SubClassOf 'Computational biology' http://edamontology.org/topic_0083 Alignment 'Alignment' SubClassOf 'Obsolete concept (EDAM)' 'Alignment' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1655 Panther Pathways entry format 'Panther Pathways entry format' SubClassOf 'Obsolete concept (EDAM)' 'Panther Pathways entry format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1654 CPDB entry format 'CPDB entry format' SubClassOf 'Obsolete concept (EDAM)' 'CPDB entry format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1653 aMAZE entry format 'aMAZE entry format' SubClassOf 'Obsolete concept (EDAM)' 'aMAZE entry format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1652 Reactome entry format 'Reactome entry format' SubClassOf 'Obsolete concept (EDAM)' 'Reactome entry format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0090 Information retrieval 'Information retrieval' SubClassOf 'Data management' 'Information retrieval' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0094 Nucleic acid thermodynamics 'Nucleic acid thermodynamics' SubClassOf 'Obsolete concept (EDAM)' 'Nucleic acid thermodynamics' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0097 Nucleic acid structure analysis 'Nucleic acid structure analysis' SubClassOf 'Nucleic acids' http://edamontology.org/format_1666 BioModel mathematical model format 'BioModel mathematical model format' SubClassOf 'Obsolete concept (EDAM)' 'BioModel mathematical model format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_3440 Genome assembly 'Genome assembly' SubClassOf 'Obsolete concept (EDAM)' 'Genome assembly' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1579 TIGRFam entry format 'TIGRFam entry format' SubClassOf 'Obsolete concept (EDAM)' 'TIGRFam entry format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1577 SMART entry format 'SMART entry format' SubClassOf 'Obsolete concept (EDAM)' 'SMART entry format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1578 Superfamily entry format 'Superfamily entry format' SubClassOf 'Obsolete concept (EDAM)' 'Superfamily entry format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1575 Panther Families and HMMs entry format 'Panther Families and HMMs entry format' SubClassOf 'Obsolete concept (EDAM)' 'Panther Families and HMMs entry format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1576 Pfam entry format 'Pfam entry format' SubClassOf 'Obsolete concept (EDAM)' 'Pfam entry format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1573 PIRSF entry format 'PIRSF entry format' SubClassOf 'Obsolete concept (EDAM)' 'PIRSF entry format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1574 PRINTS entry format 'PRINTS entry format' SubClassOf 'Obsolete concept (EDAM)' 'PRINTS entry format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1571 InterPro entry abstract format 'InterPro entry abstract format' SubClassOf 'Obsolete concept (EDAM)' 'InterPro entry abstract format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1572 Gene3D entry format 'Gene3D entry format' SubClassOf 'Obsolete concept (EDAM)' 'Gene3D entry format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1570 InterPro entry format 'InterPro entry format' SubClassOf 'Obsolete concept (EDAM)' 'InterPro entry format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0803 Human disease 'Human disease' SubClassOf 'Obsolete concept (EDAM)' 'Human disease' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1697 KEGG LIGAND entry format 'KEGG LIGAND entry format' SubClassOf 'Obsolete concept (EDAM)' 'KEGG LIGAND entry format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1698 KEGG COMPOUND entry format 'KEGG COMPOUND entry format' SubClassOf 'Obsolete concept (EDAM)' 'KEGG COMPOUND entry format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1699 KEGG PLANT entry format 'KEGG PLANT entry format' SubClassOf 'Obsolete concept (EDAM)' 'KEGG PLANT entry format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1580 ProDom entry format 'ProDom entry format' SubClassOf 'Obsolete concept (EDAM)' 'ProDom entry format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1581 FSSP entry format 'FSSP entry format' SubClassOf 'Obsolete concept (EDAM)' 'FSSP entry format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0111 Promoters 'Promoters' SubClassOf 'Obsolete concept (EDAM)' 'Promoters' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0110 Transcription 'Transcription' SubClassOf 'Obsolete concept (EDAM)' 'Transcription' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0114 Gene structure 'Gene structure' SubClassOf 'Nucleic acid sites, features and motifs' http://edamontology.org/topic_0112 Nucleic acid folding 'Nucleic acid folding' SubClassOf 'Obsolete concept (EDAM)' 'Nucleic acid folding' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0100 Nucleic acid restriction 'Nucleic acid restriction' SubClassOf 'Obsolete concept (EDAM)' 'Nucleic acid restriction' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0107 Genetic codes and codon usage 'Genetic codes and codon usage' SubClassOf 'Obsolete concept (EDAM)' 'Genetic codes and codon usage' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0109 Gene finding 'Gene finding' SubClassOf 'Obsolete concept (EDAM)' 'Gene finding' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0133 Two-dimensional gel electrophoresis 'Two-dimensional gel electrophoresis' SubClassOf 'Obsolete concept (EDAM)' 'Two-dimensional gel electrophoresis' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0137 Protein hydropathy 'Protein hydropathy' SubClassOf 'Obsolete concept (EDAM)' 'Protein hydropathy' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0134 Mass spectrometry 'Mass spectrometry' SubClassOf 'Proteomics experiment' 'Mass spectrometry' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0135 Protein microarrays 'Protein microarrays' SubClassOf 'Obsolete concept (EDAM)' 'Protein microarrays' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1420 Sequence-profile alignment (fingerprint) 'Sequence-profile alignment (fingerprint)' SubClassOf 'Obsolete concept (EDAM)' 'Sequence-profile alignment (fingerprint)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1438 Phylogenetic report 'Phylogenetic report' SubClassOf 'Obsolete concept (EDAM)' 'Phylogenetic report' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1400 Terminal gap penalty 'Terminal gap penalty' SubClassOf 'Obsolete concept (EDAM)' 'Terminal gap penalty' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1405 Gap opening penalty (float) 'Gap opening penalty (float)' SubClassOf 'Obsolete concept (EDAM)' 'Gap opening penalty (float)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1404 Gap opening penalty (integer) 'Gap opening penalty (integer)' SubClassOf 'Obsolete concept (EDAM)' 'Gap opening penalty (integer)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1407 Gap extension penalty (float) 'Gap extension penalty (float)' SubClassOf 'Obsolete concept (EDAM)' 'Gap extension penalty (float)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1406 Gap extension penalty (integer) 'Gap extension penalty (integer)' SubClassOf 'Obsolete concept (EDAM)' 'Gap extension penalty (integer)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1409 Gap separation penalty (float) 'Gap separation penalty (float)' SubClassOf 'Obsolete concept (EDAM)' 'Gap separation penalty (float)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1408 Gap separation penalty (integer) 'Gap separation penalty (integer)' SubClassOf 'Obsolete concept (EDAM)' 'Gap separation penalty (integer)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1416 Sequence alignment report (site correlation) 'Sequence alignment report (site correlation)' SubClassOf 'Obsolete concept (EDAM)' 'Sequence alignment report (site correlation)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1415 Sequence alignment report (site conservation) 'Sequence alignment report (site conservation)' SubClassOf 'Obsolete concept (EDAM)' 'Sequence alignment report (site conservation)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1414 Sequence alignment metadata (quality report) 'Sequence alignment metadata (quality report)' SubClassOf 'Obsolete concept (EDAM)' 'Sequence alignment metadata (quality report)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1418 Sequence-profile alignment (HMM) 'Sequence-profile alignment (HMM)' SubClassOf 'Obsolete concept (EDAM)' 'Sequence-profile alignment (HMM)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1417 Sequence-profile alignment (Domainatrix signature) 'Sequence-profile alignment (Domainatrix signature)' SubClassOf 'Obsolete concept (EDAM)' 'Sequence-profile alignment (Domainatrix signature)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1330 MHC Class II epitopes report 'MHC Class II epitopes report' SubClassOf 'Obsolete concept (EDAM)' 'MHC Class II epitopes report' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1331 Protein features (PEST sites) 'Protein features (PEST sites)' SubClassOf 'Obsolete concept (EDAM)' 'Protein features (PEST sites)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2090 Database entry version information 'Database entry version information' SubClassOf 'Obsolete concept (EDAM)' 'Database entry version information' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1338 Sequence database hits scores list 'Sequence database hits scores list' SubClassOf 'Obsolete concept (EDAM)' 'Sequence database hits scores list' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2092 SNP 'SNP' SubClassOf 'Obsolete concept (EDAM)' 'SNP' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1339 Sequence database hits alignments list 'Sequence database hits alignments list' SubClassOf 'Obsolete concept (EDAM)' 'Sequence database hits alignments list' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1323 Protein features report (cleavage sites) 'Protein features report (cleavage sites)' SubClassOf 'Obsolete concept (EDAM)' 'Protein features report (cleavage sites)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1324 Protein features (post-translation modifications) 'Protein features (post-translation modifications)' SubClassOf 'Obsolete concept (EDAM)' 'Protein features (post-translation modifications)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1321 Protein features (sites) 'Protein features (sites)' SubClassOf 'Obsolete concept (EDAM)' 'Protein features (sites)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1322 Protein features report (signal peptides) 'Protein features report (signal peptides)' SubClassOf 'Obsolete concept (EDAM)' 'Protein features report (signal peptides)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1329 MHC Class I epitopes report 'MHC Class I epitopes report' SubClassOf 'Obsolete concept (EDAM)' 'MHC Class I epitopes report' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1327 Protein features (epitopes) 'Protein features (epitopes)' SubClassOf 'Obsolete concept (EDAM)' 'Protein features (epitopes)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1328 Protein features report (nucleic acid binding sites) 'Protein features report (nucleic acid binding sites)' SubClassOf 'Obsolete concept (EDAM)' 'Protein features report (nucleic acid binding sites)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1325 Protein features report (active sites) 'Protein features report (active sites)' SubClassOf 'Obsolete concept (EDAM)' 'Protein features report (active sites)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1326 Protein features report (binding sites) 'Protein features report (binding sites)' SubClassOf 'Obsolete concept (EDAM)' 'Protein features report (binding sites)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_2303 STRING entry format (HTML) 'STRING entry format (HTML)' SubClassOf 'Obsolete concept (EDAM)' 'STRING entry format (HTML)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1358 Prosite nucleotide pattern 'Prosite nucleotide pattern' SubClassOf 'Obsolete concept (EDAM)' 'Prosite nucleotide pattern' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1359 Prosite protein pattern 'Prosite protein pattern' SubClassOf 'Obsolete concept (EDAM)' 'Prosite protein pattern' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1959 selex sequence format 'selex sequence format' SubClassOf 'Obsolete concept (EDAM)' 'selex sequence format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_2334 URI format 'URI format' SubClassOf 'Obsolete concept (EDAM)' 'URI format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_2399 Gene transcription features 'Gene transcription features' SubClassOf 'Gene structure' 'Gene transcription features' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1956 phylipnon sequence format 'phylipnon sequence format' SubClassOf 'Obsolete concept (EDAM)' 'phylipnon sequence format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_2397 Exons 'Exons' SubClassOf 'Coding RNA' 'Exons' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1955 phylip sequence format 'phylip sequence format' SubClassOf 'Obsolete concept (EDAM)' 'phylip sequence format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1340 Sequence database hits evaluation data 'Sequence database hits evaluation data' SubClassOf 'Obsolete concept (EDAM)' 'Sequence database hits evaluation data' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1345 MEME background frequencies file 'MEME background frequencies file' SubClassOf 'Obsolete concept (EDAM)' 'MEME background frequencies file' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1346 MEME motifs directive file 'MEME motifs directive file' SubClassOf 'Obsolete concept (EDAM)' 'MEME motifs directive file' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1344 MEME motif alphabet 'MEME motif alphabet' SubClassOf 'Obsolete concept (EDAM)' 'MEME motif alphabet' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1348 HMM emission and transition counts 'HMM emission and transition counts' SubClassOf 'Obsolete concept (EDAM)' 'HMM emission and transition counts' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_2323 ENZYME enzyme report format 'ENZYME enzyme report format' SubClassOf 'Obsolete concept (EDAM)' 'ENZYME enzyme report format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_2329 GeneCards gene report format 'GeneCards gene report format' SubClassOf 'Obsolete concept (EDAM)' 'GeneCards gene report format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1965 treecon sequence format 'treecon sequence format' SubClassOf 'Obsolete concept (EDAM)' 'treecon sequence format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_2328 PseudoCAP gene report format 'PseudoCAP gene report format' SubClassOf 'Obsolete concept (EDAM)' 'PseudoCAP gene report format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_2322 BioCyc enzyme report format 'BioCyc enzyme report format' SubClassOf 'Obsolete concept (EDAM)' 'BioCyc enzyme report format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1377 Protein conserved site signature 'Protein conserved site signature' SubClassOf 'Obsolete concept (EDAM)' 'Protein conserved site signature' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1376 Protein site signature 'Protein site signature' SubClassOf 'Obsolete concept (EDAM)' 'Protein site signature' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1379 Protein binding site signature 'Protein binding site signature' SubClassOf 'Obsolete concept (EDAM)' 'Protein binding site signature' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1378 Protein active site signature 'Protein active site signature' SubClassOf 'Obsolete concept (EDAM)' 'Protein active site signature' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1373 Protein domain signature 'Protein domain signature' SubClassOf 'Obsolete concept (EDAM)' 'Protein domain signature' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1372 Protein family signature 'Protein family signature' SubClassOf 'Obsolete concept (EDAM)' 'Protein family signature' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1375 Protein repeat signature 'Protein repeat signature' SubClassOf 'Obsolete concept (EDAM)' 'Protein repeat signature' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1374 Protein region signature 'Protein region signature' SubClassOf 'Obsolete concept (EDAM)' 'Protein region signature' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1371 HMMER NULL hidden Markov model 'HMMER NULL hidden Markov model' SubClassOf 'Obsolete concept (EDAM)' 'HMMER NULL hidden Markov model' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1368 Domainatrix signature 'Domainatrix signature' SubClassOf 'Obsolete concept (EDAM)' 'Domainatrix signature' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_3476 Gene expression data format 'Gene expression data format' SubClassOf 'Obsolete concept (EDAM)' 'Gene expression data format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_2341 NCI-Nature pathway entry format 'NCI-Nature pathway entry format' SubClassOf 'Obsolete concept (EDAM)' 'NCI-Nature pathway entry format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1918 Atomic data format 'Atomic data format' SubClassOf 'Obsolete concept (EDAM)' 'Atomic data format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1395 Score end gaps control 'Score end gaps control' SubClassOf 'Obsolete concept (EDAM)' 'Score end gaps control' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1396 Aligned sequence order 'Aligned sequence order' SubClassOf 'Obsolete concept (EDAM)' 'Aligned sequence order' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1390 Multiple protein sequence alignment 'Multiple protein sequence alignment' SubClassOf 'Obsolete concept (EDAM)' 'Multiple protein sequence alignment' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1924 clustal sequence format 'clustal sequence format' SubClassOf 'Obsolete concept (EDAM)' 'clustal sequence format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1386 Sequence alignment (nucleic acid pair) 'Sequence alignment (nucleic acid pair)' SubClassOf 'Obsolete concept (EDAM)' 'Sequence alignment (nucleic acid pair)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1389 Multiple nucleotide sequence alignment 'Multiple nucleotide sequence alignment' SubClassOf 'Obsolete concept (EDAM)' 'Multiple nucleotide sequence alignment' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1388 Hybrid sequence alignment (pair) 'Hybrid sequence alignment (pair)' SubClassOf 'Obsolete concept (EDAM)' 'Hybrid sequence alignment (pair)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1387 Sequence alignment (protein pair) 'Sequence alignment (protein pair)' SubClassOf 'Obsolete concept (EDAM)' 'Sequence alignment (protein pair)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1382 Sequence alignment (multiple) 'Sequence alignment (multiple)' SubClassOf 'Obsolete concept (EDAM)' 'Sequence alignment (multiple)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1380 Protein post-translational modification signature 'Protein post-translational modification signature' SubClassOf 'Obsolete concept (EDAM)' 'Protein post-translational modification signature' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0504 Multiple structure alignment construction 'Multiple structure alignment construction' SubClassOf 'Obsolete concept (EDAM)' 'Multiple structure alignment construction' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0500 Secondary structure alignment generation 'Secondary structure alignment generation' SubClassOf 'Obsolete concept (EDAM)' 'Secondary structure alignment generation' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0507 Pairwise structure alignment generation (local) 'Pairwise structure alignment generation (local)' SubClassOf 'Obsolete concept (EDAM)' 'Pairwise structure alignment generation (local)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0508 Pairwise structure alignment generation (global) 'Pairwise structure alignment generation (global)' SubClassOf 'Obsolete concept (EDAM)' 'Pairwise structure alignment generation (global)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0505 Structure alignment (protein) 'Structure alignment (protein)' SubClassOf 'Obsolete concept (EDAM)' 'Structure alignment (protein)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0506 Structure alignment (RNA) 'Structure alignment (RNA)' SubClassOf 'Obsolete concept (EDAM)' 'Structure alignment (RNA)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0515 Data retrieval (tool metadata) 'Data retrieval (tool metadata)' SubClassOf 'Obsolete concept (EDAM)' 'Data retrieval (tool metadata)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0514 Structural profile alignment generation (multiple) 'Structural profile alignment generation (multiple)' SubClassOf 'Obsolete concept (EDAM)' 'Structural profile alignment generation (multiple)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0512 Sequence alignment generation (multiple profile) 'Sequence alignment generation (multiple profile)' SubClassOf 'Obsolete concept (EDAM)' 'Sequence alignment generation (multiple profile)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_3413 Infectious tropical disease 'Infectious tropical disease' SubClassOf 'Infectious disease' 'Infectious tropical disease' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0188 Sequence profiles and HMMs 'Sequence profiles and HMMs' SubClassOf 'Obsolete concept (EDAM)' 'Sequence profiles and HMMs' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0184 Threading 'Threading' SubClassOf 'Obsolete concept (EDAM)' 'Threading' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0183 Structure alignment 'Structure alignment' SubClassOf 'Obsolete concept (EDAM)' 'Structure alignment' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0182 Sequence alignment 'Sequence alignment' SubClassOf 'Obsolete concept (EDAM)' 'Sequence alignment' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0180 Protein fold recognition 'Protein fold recognition' SubClassOf 'Obsolete concept (EDAM)' 'Protein fold recognition' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_3466 EPS 'EPS' SubClassOf 'Textual format' 'EPS' SubClassOf http://edamontology.org/format_3696 http://edamontology.org/topic_0199 Genetic variation 'Genetic variation' SubClassOf 'Genetics' 'Genetic variation' SubClassOf 'Nucleic acid sites, features and motifs' 'Genetic variation' SubClassOf 'Molecular genetics' http://edamontology.org/topic_0195 Virtual PCR 'Virtual PCR' SubClassOf 'Obsolete concept (EDAM)' 'Virtual PCR' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0191 Phylogeny reconstruction 'Phylogeny reconstruction' SubClassOf 'Obsolete concept (EDAM)' 'Phylogeny reconstruction' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1977 swiss feature 'swiss feature' SubClassOf 'Obsolete concept (EDAM)' 'swiss feature' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1976 pir 'pir' SubClassOf 'Obsolete concept (EDAM)' 'pir' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0166 Protein structural motifs and surfaces 'Protein structural motifs and surfaces' SubClassOf 'Protein sites, features and motifs' http://edamontology.org/format_1971 meganon sequence format 'meganon sequence format' SubClassOf 'Obsolete concept (EDAM)' 'meganon sequence format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0163 Sequence database search 'Sequence database search' SubClassOf 'Obsolete concept (EDAM)' 'Sequence database search' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0164 Sequence clustering 'Sequence clustering' SubClassOf 'Obsolete concept (EDAM)' 'Sequence clustering' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0167 Structural (3D) profiles 'Structural (3D) profiles' SubClassOf 'Obsolete concept (EDAM)' 'Structural (3D) profiles' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1980 EMBL feature 'EMBL feature' SubClassOf 'Obsolete concept (EDAM)' 'EMBL feature' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1981 GenBank feature 'GenBank feature' SubClassOf 'Obsolete concept (EDAM)' 'GenBank feature' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0172 Protein structure prediction 'Protein structure prediction' SubClassOf 'Obsolete concept (EDAM)' 'Protein structure prediction' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0173 Nucleic acid structure prediction 'Nucleic acid structure prediction' SubClassOf 'Obsolete concept (EDAM)' 'Nucleic acid structure prediction' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0174 Ab initio structure prediction 'Ab initio structure prediction' SubClassOf 'Obsolete concept (EDAM)' 'Ab initio structure prediction' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0175 Homology modelling 'Homology modelling' SubClassOf 'Obsolete concept (EDAM)' 'Homology modelling' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0177 Molecular docking 'Molecular docking' SubClassOf 'Obsolete concept (EDAM)' 'Molecular docking' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0179 Protein tertiary structure prediction 'Protein tertiary structure prediction' SubClassOf 'Obsolete concept (EDAM)' 'Protein tertiary structure prediction' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0178 Protein secondary structure prediction 'Protein secondary structure prediction' SubClassOf 'Obsolete concept (EDAM)' 'Protein secondary structure prediction' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0559 Immunogenicity prediction 'Immunogenicity prediction' SubClassOf 'Obsolete concept (EDAM)' 'Immunogenicity prediction' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0517 PCR primer design (for large scale sequencing) 'PCR primer design (for large scale sequencing)' SubClassOf 'has topic' some 'Sequencing' 'PCR primer design (for large scale sequencing)' SubClassOf 'PCR primer design' 'PCR primer design (for large scale sequencing)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0516 Data retrieval (database metadata) 'Data retrieval (database metadata)' SubClassOf 'Obsolete concept (EDAM)' 'Data retrieval (database metadata)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0519 PCR primer design (for gene transcription profiling) 'PCR primer design (for gene transcription profiling)' SubClassOf 'has topic' some 'Gene expression' 'PCR primer design (for gene transcription profiling)' SubClassOf 'PCR primer design' 'PCR primer design (for gene transcription profiling)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0518 PCR primer design (for genotyping polymorphisms) 'PCR primer design (for genotyping polymorphisms)' SubClassOf 'PCR primer design' 'PCR primer design (for genotyping polymorphisms)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1995 nexusnon alignment format 'nexusnon alignment format' SubClassOf 'Obsolete concept (EDAM)' 'nexusnon alignment format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0143 Protein structure comparison 'Protein structure comparison' SubClassOf 'Obsolete concept (EDAM)' 'Protein structure comparison' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0144 Protein residue interactions 'Protein residue interactions' SubClassOf 'Obsolete concept (EDAM)' 'Protein residue interactions' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1993 msf alignment format 'msf alignment format' SubClassOf 'Obsolete concept (EDAM)' 'msf alignment format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0141 Protein cleavage sites and proteolysis 'Protein cleavage sites and proteolysis' SubClassOf 'Obsolete concept (EDAM)' 'Protein cleavage sites and proteolysis' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1994 nexus alignment format 'nexus alignment format' SubClassOf 'Obsolete concept (EDAM)' 'nexus alignment format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0149 Protein-nucleic acid interactions 'Protein-nucleic acid interactions' SubClassOf 'Obsolete concept (EDAM)' 'Protein-nucleic acid interactions' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0148 Protein-ligand interactions 'Protein-ligand interactions' SubClassOf 'Obsolete concept (EDAM)' 'Protein-ligand interactions' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0147 Protein-protein interactions 'Protein-protein interactions' SubClassOf 'Obsolete concept (EDAM)' 'Protein-protein interactions' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0520 PCR primer design (for conserved primers) 'PCR primer design (for conserved primers)' SubClassOf 'PCR primer design' 'PCR primer design (for conserved primers)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0521 PCR primer design (based on gene structure) 'PCR primer design (based on gene structure)' SubClassOf 'has topic' some 'Gene structure' 'PCR primer design (based on gene structure)' SubClassOf 'PCR primer design' 'PCR primer design (based on gene structure)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0522 PCR primer design (for methylation PCRs) 'PCR primer design (for methylation PCRs)' SubClassOf 'PCR primer design' 'PCR primer design (for methylation PCRs)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0529 MPSS data processing 'MPSS data processing' SubClassOf 'Obsolete concept (EDAM)' 'MPSS data processing' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0528 SAGE data processing 'SAGE data processing' SubClassOf 'Obsolete concept (EDAM)' 'SAGE data processing' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0152 Carbohydrates 'Carbohydrates' SubClassOf 'Biochemistry' 'Carbohydrates' SubClassOf 'Structure analysis' http://edamontology.org/topic_0153 Lipids 'Lipids' SubClassOf 'Biochemistry' 'Lipids' SubClassOf 'Structure analysis' http://edamontology.org/topic_0154 Small molecules 'Small molecules' SubClassOf 'Biochemistry' 'Small molecules' SubClassOf 'Structure analysis' http://edamontology.org/topic_0150 Protein design 'Protein design' SubClassOf 'Obsolete concept (EDAM)' 'Protein design' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0151 G protein-coupled receptors (GPCR) 'G protein-coupled receptors (GPCR)' SubClassOf 'Obsolete concept (EDAM)' 'G protein-coupled receptors (GPCR)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0156 Sequence editing 'Sequence editing' SubClassOf 'Obsolete concept (EDAM)' 'Sequence editing' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0159 Sequence comparison 'Sequence comparison' SubClassOf 'Obsolete concept (EDAM)' 'Sequence comparison' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0158 Sequence motifs 'Sequence motifs' SubClassOf 'Obsolete concept (EDAM)' 'Sequence motifs' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0532 Gene expression profile analysis 'Gene expression profile analysis' SubClassOf 'Obsolete concept (EDAM)' 'Gene expression profile analysis' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0530 SBS data processing 'SBS data processing' SubClassOf 'Obsolete concept (EDAM)' 'SBS data processing' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0536 Protein structure assignment (from X-ray crystallographic data) 'Protein structure assignment (from X-ray crystallographic data)' SubClassOf 'Obsolete concept (EDAM)' 'Protein structure assignment (from X-ray crystallographic data)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0537 Protein structure assignment (from NMR data) 'Protein structure assignment (from NMR data)' SubClassOf 'Obsolete concept (EDAM)' 'Protein structure assignment (from NMR data)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0574 Sequence motif rendering 'Sequence motif rendering' SubClassOf 'Obsolete concept (EDAM)' 'Sequence motif rendering' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0577 DNA linear map rendering 'DNA linear map rendering' SubClassOf 'Obsolete concept (EDAM)' 'DNA linear map rendering' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_3353 Ontology comparison 'Ontology comparison' SubClassOf 'Obsolete concept (EDAM)' 'Ontology comparison' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0563 Codon usage table formatting 'Codon usage table formatting' SubClassOf 'Obsolete concept (EDAM)' 'Codon usage table formatting' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0562 Sequence alignment formatting 'Sequence alignment formatting' SubClassOf 'Obsolete concept (EDAM)' 'Sequence alignment formatting' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0222 Genome annotation 'Genome annotation' SubClassOf 'Obsolete concept (EDAM)' 'Genome annotation' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0561 Sequence formatting 'Sequence formatting' SubClassOf 'Obsolete concept (EDAM)' 'Sequence formatting' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0221 Sequence annotation 'Sequence annotation' SubClassOf 'Obsolete concept (EDAM)' 'Sequence annotation' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0220 Document, record and content management 'Document, record and content management' SubClassOf 'Data management' 'Document, record and content management' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0217 Literature analysis 'Literature analysis' SubClassOf 'Obsolete concept (EDAM)' 'Literature analysis' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0215 Worms 'Worms' SubClassOf 'Obsolete concept (EDAM)' 'Worms' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0211 Flies 'Flies' SubClassOf 'Obsolete concept (EDAM)' 'Flies' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2100 Type 'Type' SubClassOf 'Obsolete concept (EDAM)' 'Type' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0210 Fish 'Fish' SubClassOf 'Obsolete concept (EDAM)' 'Fish' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2103 Gene name (KEGG GENES) 'Gene name (KEGG GENES)' SubClassOf 'Obsolete concept (EDAM)' 'Gene name (KEGG GENES)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0200 Microarrays 'Microarrays' SubClassOf 'Obsolete concept (EDAM)' 'Microarrays' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0203 Gene expression 'Gene expression' SubClassOf 'Genetics' 'Gene expression' SubClassOf 'Molecular genetics' http://edamontology.org/data_2925 Sequence data 'Sequence data' SubClassOf 'Obsolete concept (EDAM)' 'Sequence data' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2927 Codon usage 'Codon usage' SubClassOf 'Obsolete concept (EDAM)' 'Codon usage' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1228 UniGene entry format 'UniGene entry format' SubClassOf 'Obsolete concept (EDAM)' 'UniGene entry format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_3515 Protein-drug interactions 'Protein-drug interactions' SubClassOf 'Protein-ligand interactions' 'Protein-drug interactions' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_3514 Protein-ligand interactions 'Protein-ligand interactions' SubClassOf 'Protein interactions' 'Protein-ligand interactions' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_3511 Nucleic acid sites, features and motifs 'Nucleic acid sites, features and motifs' SubClassOf 'Nucleic acids' http://edamontology.org/topic_3510 Protein sites, features and motifs 'Protein sites, features and motifs' SubClassOf 'Proteins' http://edamontology.org/topic_3526 Protein-protein interactions 'Protein-protein interactions' SubClassOf 'Protein interactions' 'Protein-protein interactions' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_3527 Cellular process pathways 'Cellular process pathways' SubClassOf 'Molecular interactions, pathways and networks' 'Cellular process pathways' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_3528 Disease pathways 'Disease pathways' SubClassOf 'Molecular interactions, pathways and networks' 'Disease pathways' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_3529 Environmental information processing pathways 'Environmental information processing pathways' SubClassOf 'Molecular interactions, pathways and networks' 'Environmental information processing pathways' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_3522 Northern blot experiment 'Northern blot experiment' SubClassOf 'Proteomics experiment' 'Northern blot experiment' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_3525 Protein-nucleic acid interactions 'Protein-nucleic acid interactions' SubClassOf 'Protein interactions' 'Protein-nucleic acid interactions' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_3521 2D PAGE experiment '2D PAGE experiment' SubClassOf 'Proteomics experiment' '2D PAGE experiment' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1247 COG sequence cluster format 'COG sequence cluster format' SubClassOf 'Obsolete concept (EDAM)' 'COG sequence cluster format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2116 Nucleic acid features (codon) 'Nucleic acid features (codon)' SubClassOf 'Obsolete concept (EDAM)' 'Nucleic acid features (codon)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2142 EMBOSS graph 'EMBOSS graph' SubClassOf 'Obsolete concept (EDAM)' 'EMBOSS graph' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2143 EMBOSS report 'EMBOSS report' SubClassOf 'Obsolete concept (EDAM)' 'EMBOSS report' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2145 Sequence offset 'Sequence offset' SubClassOf 'Obsolete concept (EDAM)' 'Sequence offset' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2146 Threshold 'Threshold' SubClassOf 'Obsolete concept (EDAM)' 'Threshold' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2147 Protein report (transcription factor) 'Protein report (transcription factor)' SubClassOf 'Obsolete concept (EDAM)' 'Protein report (transcription factor)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2149 Database category name 'Database category name' SubClassOf 'Obsolete concept (EDAM)' 'Database category name' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2954 Article report 'Article report' SubClassOf 'Obsolete concept (EDAM)' 'Article report' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2246 Demonstration 'Demonstration' SubClassOf 'Obsolete concept (EDAM)' 'Demonstration' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_1308 Matrix/scaffold attachment sites 'Matrix/scaffold attachment sites' SubClassOf 'Gene transcription features' 'Matrix/scaffold attachment sites' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_1307 Splice sites 'Splice sites' SubClassOf 'Gene transcript features' 'Splice sites' SubClassOf 'RNA splicing' 'Splice sites' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_1305 Restriction sites 'Restriction sites' SubClassOf 'DNA binding sites' 'Restriction sites' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_1304 CpG island and isochores 'CpG island and isochores' SubClassOf 'Gene transcription features' 'CpG island and isochores' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_1302 PolyA signal or sites 'PolyA signal or sites' SubClassOf 'Gene transcript features' 'PolyA signal or sites' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2141 Window step size 'Window step size' SubClassOf 'Obsolete concept (EDAM)' 'Window step size' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2134 Results sort order 'Results sort order' SubClassOf 'Obsolete concept (EDAM)' 'Results sort order' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2132 Mutation type 'Mutation type' SubClassOf 'Obsolete concept (EDAM)' 'Mutation type' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2135 Toggle 'Toggle' SubClassOf 'Obsolete concept (EDAM)' 'Toggle' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2961 Gene regulatory network report 'Gene regulatory network report' SubClassOf 'Obsolete concept (EDAM)' 'Gene regulatory network report' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2136 Sequence width 'Sequence width' SubClassOf 'Obsolete concept (EDAM)' 'Sequence width' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2967 Microarray image 'Microarray image' SubClassOf 'Obsolete concept (EDAM)' 'Microarray image' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2965 2D PAGE gel report '2D PAGE gel report' SubClassOf 'Obsolete concept (EDAM)' '2D PAGE gel report' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2130 Sequence profile type 'Sequence profile type' SubClassOf 'Obsolete concept (EDAM)' 'Sequence profile type' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2169 Nucleic acid features (siRNA) 'Nucleic acid features (siRNA)' SubClassOf 'Obsolete concept (EDAM)' 'Nucleic acid features (siRNA)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2164 Protein sequence properties plot 'Protein sequence properties plot' SubClassOf 'Obsolete concept (EDAM)' 'Protein sequence properties plot' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2224 Data retrieval (ontology concept) 'Data retrieval (ontology concept)' SubClassOf 'Obsolete concept (EDAM)' 'Data retrieval (ontology concept)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2222 Data retrieval (ontology annotation) 'Data retrieval (ontology annotation)' SubClassOf 'Obsolete concept (EDAM)' 'Data retrieval (ontology annotation)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2157 Word composition 'Word composition' SubClassOf 'Obsolete concept (EDAM)' 'Word composition' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2156 Date 'Date' SubClassOf 'Obsolete concept (EDAM)' 'Date' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2237 Data retrieval (sequence profile) 'Data retrieval (sequence profile)' SubClassOf 'Obsolete concept (EDAM)' 'Data retrieval (sequence profile)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2239 3D-1D scoring matrix generation '3D-1D scoring matrix generation' SubClassOf 'has topic' some 'Structure comparison' '3D-1D scoring matrix generation' SubClassOf 'has topic' some 'Structure analysis' http://edamontology.org/data_2152 Rendering parameter 'Rendering parameter' SubClassOf 'Obsolete concept (EDAM)' 'Rendering parameter' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2151 Color 'Color' SubClassOf 'Obsolete concept (EDAM)' 'Color' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2150 Sequence profile name 'Sequence profile name' SubClassOf 'Obsolete concept (EDAM)' 'Sequence profile name' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2234 Structure file processing 'Structure file processing' SubClassOf 'Obsolete concept (EDAM)' 'Structure file processing' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2180 2 or more '2 or more' SubClassOf 'Obsolete concept (EDAM)' '2 or more' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2178 1 or more '1 or more' SubClassOf 'Obsolete concept (EDAM)' '1 or more' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2177 Exactly 1 'Exactly 1' SubClassOf 'Obsolete concept (EDAM)' 'Exactly 1' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2176 Cardinality 'Cardinality' SubClassOf 'Obsolete concept (EDAM)' 'Cardinality' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2179 Exactly 2 'Exactly 2' SubClassOf 'Obsolete concept (EDAM)' 'Exactly 2' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2173 Sequence set (stream) 'Sequence set (stream)' SubClassOf 'Obsolete concept (EDAM)' 'Sequence set (stream)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2972 Workflow 'Workflow' SubClassOf 'Obsolete concept (EDAM)' 'Workflow' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2971 Workflow data 'Workflow data' SubClassOf 'Obsolete concept (EDAM)' 'Workflow data' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2973 Secondary structure data 'Secondary structure data' SubClassOf 'Obsolete concept (EDAM)' 'Secondary structure data' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1308 Nucleic acid features report (matrix/scaffold attachment sites) 'Nucleic acid features report (matrix/scaffold attachment sites)' SubClassOf 'Obsolete concept (EDAM)' 'Nucleic acid features report (matrix/scaffold attachment sites)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1307 Nucleic acid features report (splice sites) 'Nucleic acid features report (splice sites)' SubClassOf 'Obsolete concept (EDAM)' 'Nucleic acid features report (splice sites)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1309 Gene features (exonic splicing enhancer) 'Gene features (exonic splicing enhancer)' SubClassOf 'Obsolete concept (EDAM)' 'Gene features (exonic splicing enhancer)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1304 Nucleic acid features report (CpG island and isochore) 'Nucleic acid features report (CpG island and isochore)' SubClassOf 'Obsolete concept (EDAM)' 'Nucleic acid features report (CpG island and isochore)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1303 Nucleic acid features (quadruplexes) 'Nucleic acid features (quadruplexes)' SubClassOf 'Obsolete concept (EDAM)' 'Nucleic acid features (quadruplexes)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1306 Nucleosome exclusion sequences 'Nucleosome exclusion sequences' SubClassOf 'Obsolete concept (EDAM)' 'Nucleosome exclusion sequences' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2264 Data retrieval (pathway or network) 'Data retrieval (pathway or network)' SubClassOf 'Obsolete concept (EDAM)' 'Data retrieval (pathway or network)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1305 Nucleic acid features report (restriction sites) 'Nucleic acid features report (restriction sites)' SubClassOf 'Obsolete concept (EDAM)' 'Nucleic acid features report (restriction sites)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2265 Data retrieval (identifier) 'Data retrieval (identifier)' SubClassOf 'Obsolete concept (EDAM)' 'Data retrieval (identifier)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1300 Gene and transcript structure (report) 'Gene and transcript structure (report)' SubClassOf 'Obsolete concept (EDAM)' 'Gene and transcript structure (report)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1302 Nucleic acid features report (PolyA signal or site) 'Nucleic acid features report (PolyA signal or site)' SubClassOf 'Obsolete concept (EDAM)' 'Nucleic acid features report (PolyA signal or site)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1301 Mobile genetic elements 'Mobile genetic elements' SubClassOf 'Obsolete concept (EDAM)' 'Mobile genetic elements' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2989 Protein features report (key folding sites) 'Protein features report (key folding sites)' SubClassOf 'Obsolete concept (EDAM)' 'Protein features report (key folding sites)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2987 Classification report 'Classification report' SubClassOf 'Obsolete concept (EDAM)' 'Classification report' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2986 Nucleic acid classification 'Nucleic acid classification' SubClassOf 'Obsolete concept (EDAM)' 'Nucleic acid classification' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2983 Pathway or network data 'Pathway or network data' SubClassOf 'Obsolete concept (EDAM)' 'Pathway or network data' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2982 Sequence profile data 'Sequence profile data' SubClassOf 'Obsolete concept (EDAM)' 'Sequence profile data' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2981 Sequence motif data 'Sequence motif data' SubClassOf 'Obsolete concept (EDAM)' 'Sequence motif data' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2980 Protein classification 'Protein classification' SubClassOf 'Obsolete concept (EDAM)' 'Protein classification' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2198 Gene cluster 'Gene cluster' SubClassOf 'Obsolete concept (EDAM)' 'Gene cluster' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_1311 Operon 'Operon' SubClassOf 'Gene structure' 'Operon' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_1312 Promoters 'Promoters' SubClassOf 'Transcription factors and regulatory sites' 'Promoters' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2191 Protein features report (chemical modifications) 'Protein features report (chemical modifications)' SubClassOf 'Obsolete concept (EDAM)' 'Protein features report (chemical modifications)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2192 Error 'Error' SubClassOf 'Obsolete concept (EDAM)' 'Error' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1315 Transcription factor binding sites 'Transcription factor binding sites' SubClassOf 'Obsolete concept (EDAM)' 'Transcription factor binding sites' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1314 Gene features (SECIS element) 'Gene features (SECIS element)' SubClassOf 'Obsolete concept (EDAM)' 'Gene features (SECIS element)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1313 Coding region 'Coding region' SubClassOf 'Obsolete concept (EDAM)' 'Coding region' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1312 Nucleic acid features report (promoters) 'Nucleic acid features report (promoters)' SubClassOf 'Obsolete concept (EDAM)' 'Nucleic acid features report (promoters)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1311 Gene features report (operon) 'Gene features report (operon)' SubClassOf 'Obsolete concept (EDAM)' 'Gene features report (operon)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1310 Nucleic acid features (microRNA) 'Nucleic acid features (microRNA)' SubClassOf 'Obsolete concept (EDAM)' 'Nucleic acid features (microRNA)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1237 HMMER synthetic sequences set 'HMMER synthetic sequences set' SubClassOf 'Obsolete concept (EDAM)' 'HMMER synthetic sequences set' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1236 Psiblast checkpoint file 'Psiblast checkpoint file' SubClassOf 'Obsolete concept (EDAM)' 'Psiblast checkpoint file' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1810 ColiCard report format 'ColiCard report format' SubClassOf 'Obsolete concept (EDAM)' 'ColiCard report format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_1774 Annotation retrieval 'Annotation retrieval' SubClassOf 'Obsolete concept (EDAM)' 'Annotation retrieval' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_0992 Ligand identifier 'Ligand identifier' SubClassOf 'Obsolete concept (EDAM)' 'Ligand identifier' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1264 Sequence composition table 'Sequence composition table' SubClassOf 'Obsolete concept (EDAM)' 'Sequence composition table' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1269 DAS sequence feature annotation 'DAS sequence feature annotation' SubClassOf 'Obsolete concept (EDAM)' 'DAS sequence feature annotation' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_1780 Sequence submission 'Sequence submission' SubClassOf 'Obsolete concept (EDAM)' 'Sequence submission' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1809 BacMap gene card format 'BacMap gene card format' SubClassOf 'Obsolete concept (EDAM)' 'BacMap gene card format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_1808 GeneIlluminator gene report format 'GeneIlluminator gene report format' SubClassOf 'Obsolete concept (EDAM)' 'GeneIlluminator gene report format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1256 Sequence features (comparative) 'Sequence features (comparative)' SubClassOf 'Obsolete concept (EDAM)' 'Sequence features (comparative)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1258 Sequence property (nucleic acid) 'Sequence property (nucleic acid)' SubClassOf 'Obsolete concept (EDAM)' 'Sequence property (nucleic acid)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1257 Sequence property (protein) 'Sequence property (protein)' SubClassOf 'Obsolete concept (EDAM)' 'Sequence property (protein)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1252 Sequence length range 'Sequence length range' SubClassOf 'Obsolete concept (EDAM)' 'Sequence length range' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1251 Window size 'Window size' SubClassOf 'Obsolete concept (EDAM)' 'Window size' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1253 Sequence information report 'Sequence information report' SubClassOf 'Obsolete concept (EDAM)' 'Sequence information report' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1250 Word size 'Word size' SubClassOf 'Obsolete concept (EDAM)' 'Word size' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1244 primersearch primer pairs sequence record 'primersearch primer pairs sequence record' SubClassOf 'Obsolete concept (EDAM)' 'primersearch primer pairs sequence record' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1243 Primer3 mispriming library file 'Primer3 mispriming library file' SubClassOf 'Obsolete concept (EDAM)' 'Primer3 mispriming library file' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1242 Primer3 internal oligo mishybridizing library 'Primer3 internal oligo mishybridizing library' SubClassOf 'Obsolete concept (EDAM)' 'Primer3 internal oligo mishybridizing library' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1241 vectorstrip cloning vector definition file 'vectorstrip cloning vector definition file' SubClassOf 'Obsolete concept (EDAM)' 'vectorstrip cloning vector definition file' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_3582 afg 'afg' SubClassOf 'Sequence assembly format' 'afg' SubClassOf 'Sequence assembly format (text)' http://edamontology.org/data_0948 Data resource definition 'Data resource definition' SubClassOf 'Obsolete concept (EDAM)' 'Data resource definition' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_0952 EMBOSS database resource definition 'EMBOSS database resource definition' SubClassOf 'Obsolete concept (EDAM)' 'EMBOSS database resource definition' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_0953 Version information 'Version information' SubClassOf 'Obsolete concept (EDAM)' 'Version information' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_3191 Trim to reference 'Trim to reference' SubClassOf 'Obsolete concept (EDAM)' 'Trim to reference' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_0959 Job metadata 'Job metadata' SubClassOf 'Obsolete concept (EDAM)' 'Job metadata' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_3190 Trim vector 'Trim vector' SubClassOf 'Obsolete concept (EDAM)' 'Trim vector' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_0964 Scent annotation 'Scent annotation' SubClassOf 'Obsolete concept (EDAM)' 'Scent annotation' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1294 GlobPlot domain image 'GlobPlot domain image' SubClassOf 'Obsolete concept (EDAM)' 'GlobPlot domain image' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1293 SMART protein schematic 'SMART protein schematic' SubClassOf 'Obsolete concept (EDAM)' 'SMART protein schematic' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1292 InterPro architecture image 'InterPro architecture image' SubClassOf 'Obsolete concept (EDAM)' 'InterPro architecture image' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1291 InterPro detailed match image 'InterPro detailed match image' SubClassOf 'Obsolete concept (EDAM)' 'InterPro detailed match image' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1290 InterPro compact match image 'InterPro compact match image' SubClassOf 'Obsolete concept (EDAM)' 'InterPro compact match image' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_3542 Protein secondary structure 'Protein secondary structure' SubClassOf 'Protein sites, features and motifs' http://edamontology.org/topic_3543 Protein sequence repeats 'Protein sequence repeats' SubClassOf 'Protein sites, features and motifs' 'Protein sequence repeats' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_3540 Protein key folding sites 'Protein key folding sites' SubClassOf 'Protein sites, features and motifs' 'Protein key folding sites' SubClassOf 'Protein folding, stability and design' 'Protein key folding sites' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_3541 Protein post-translational modifications 'Protein post-translational modifications' SubClassOf 'Protein sites, features and motifs' 'Protein post-translational modifications' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_0978 Discrete entity identifier 'Discrete entity identifier' SubClassOf 'Obsolete concept (EDAM)' 'Discrete entity identifier' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_0979 Entity feature identifier 'Entity feature identifier' SubClassOf 'Obsolete concept (EDAM)' 'Entity feature identifier' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_0974 Entity identifier 'Entity identifier' SubClassOf 'Obsolete concept (EDAM)' 'Entity identifier' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_3544 Protein signal peptides 'Protein signal peptides' SubClassOf 'Protein sites, features and motifs' 'Protein signal peptides' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_0975 Data resource identifier 'Data resource identifier' SubClassOf 'Obsolete concept (EDAM)' 'Data resource identifier' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1299 Sequence features (repeats) 'Sequence features (repeats)' SubClassOf 'Obsolete concept (EDAM)' 'Sequence features (repeats)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1298 Sequence motif matches 'Sequence motif matches' SubClassOf 'Obsolete concept (EDAM)' 'Sequence motif matches' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1281 Sequence signature map 'Sequence signature map' SubClassOf 'Obsolete concept (EDAM)' 'Sequence signature map' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_3530 Genetic information processing pathways 'Genetic information processing pathways' SubClassOf 'Molecular interactions, pathways and networks' 'Genetic information processing pathways' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_3531 Protein super-secondary structure 'Protein super-secondary structure' SubClassOf 'Protein structural motifs and surfaces' 'Protein super-secondary structure' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_3538 Protein disordered structure 'Protein disordered structure' SubClassOf 'Protein sites, features and motifs' 'Protein disordered structure' SubClassOf 'Protein structure analysis' http://edamontology.org/topic_3537 Protein chemical modifications 'Protein chemical modifications' SubClassOf 'Protein sites, features and motifs' 'Protein chemical modifications' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_3539 Protein domains 'Protein domains' SubClassOf 'Protein sites, features and motifs' 'Protein domains' SubClassOf 'Protein domains and folds' 'Protein domains' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_3534 Protein binding sites 'Protein binding sites' SubClassOf 'Protein structural motifs and surfaces' 'Protein binding sites' SubClassOf 'Protein sites, features and motifs' http://edamontology.org/topic_3533 Protein active sites 'Protein active sites' SubClassOf 'Protein structural motifs and surfaces' 'Protein active sites' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_0986 Chemical identifier 'Chemical identifier' SubClassOf 'Obsolete concept (EDAM)' 'Chemical identifier' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_3536 Protein cleavage sites 'Protein cleavage sites' SubClassOf 'Protein sites, features and motifs' 'Protein cleavage sites' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_0985 Molecule type 'Molecule type' SubClassOf 'Obsolete concept (EDAM)' 'Molecule type' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_3535 Protein-nucleic acid binding sites 'Protein-nucleic acid binding sites' SubClassOf 'Protein structural motifs and surfaces' 'Protein-nucleic acid binding sites' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_0981 Phenomenon identifier 'Phenomenon identifier' SubClassOf 'Obsolete concept (EDAM)' 'Phenomenon identifier' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_0980 Entity collection identifier 'Entity collection identifier' SubClassOf 'Obsolete concept (EDAM)' 'Entity collection identifier' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_0904 Protein features (mutation) 'Protein features (mutation)' SubClassOf 'Obsolete concept (EDAM)' 'Protein features (mutation)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_0911 Nucleotide base annotation 'Nucleotide base annotation' SubClassOf 'Obsolete concept (EDAM)' 'Nucleotide base annotation' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_0918 DNA variation 'DNA variation' SubClassOf 'Obsolete concept (EDAM)' 'DNA variation' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_0917 Gene classification 'Gene classification' SubClassOf 'Obsolete concept (EDAM)' 'Gene classification' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_0919 Chromosome report 'Chromosome report' SubClassOf 'has topic' some 'Chromosomes' http://edamontology.org/data_0922 Nucleic acid features report (primers) 'Nucleic acid features report (primers)' SubClassOf 'Obsolete concept (EDAM)' 'Nucleic acid features report (primers)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_0923 PCR experiment report 'PCR experiment report' SubClassOf 'Obsolete concept (EDAM)' 'PCR experiment report' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_0933 SAGE experimental data 'SAGE experimental data' SubClassOf 'Obsolete concept (EDAM)' 'SAGE experimental data' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_0934 MPSS experimental data 'MPSS experimental data' SubClassOf 'Obsolete concept (EDAM)' 'MPSS experimental data' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_0935 SBS experimental data 'SBS experimental data' SubClassOf 'Obsolete concept (EDAM)' 'SBS experimental data' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_0931 Microarray experiment report 'Microarray experiment report' SubClassOf 'Obsolete concept (EDAM)' 'Microarray experiment report' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_3189 Trim ends 'Trim ends' SubClassOf 'Obsolete concept (EDAM)' 'Trim ends' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_0932 Oligonucleotide probe data 'Oligonucleotide probe data' SubClassOf 'Obsolete concept (EDAM)' 'Oligonucleotide probe data' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_0946 Pathway or network annotation 'Pathway or network annotation' SubClassOf 'Obsolete concept (EDAM)' 'Pathway or network annotation' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_0947 Biological pathway map 'Biological pathway map' SubClassOf 'Obsolete concept (EDAM)' 'Biological pathway map' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2201 Sequence record full 'Sequence record full' SubClassOf 'Obsolete concept (EDAM)' 'Sequence record full' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_3259 Transcriptome assembly (de novo) 'Transcriptome assembly (de novo)' SubClassOf 'Obsolete concept (EDAM)' 'Transcriptome assembly (de novo)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_3260 Transcriptome assembly (mapping) 'Transcriptome assembly (mapping)' SubClassOf 'Obsolete concept (EDAM)' 'Transcriptome assembly (mapping)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2240 Heterogen annotation 'Heterogen annotation' SubClassOf 'Obsolete concept (EDAM)' 'Heterogen annotation' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2248 Schema 'Schema' SubClassOf 'Obsolete concept (EDAM)' 'Schema' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2247 Phylogenetic consensus tree 'Phylogenetic consensus tree' SubClassOf 'Obsolete concept (EDAM)' 'Phylogenetic consensus tree' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2245 Sequence set (bootstrapped) 'Sequence set (bootstrapped)' SubClassOf 'Obsolete concept (EDAM)' 'Sequence set (bootstrapped)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2242 Phylogenetic property values 'Phylogenetic property values' SubClassOf 'Obsolete concept (EDAM)' 'Phylogenetic property values' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2249 DTD 'DTD' SubClassOf 'Obsolete concept (EDAM)' 'DTD' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_3200 DNA barcoding 'DNA barcoding' SubClassOf 'Taxonomic classification' http://edamontology.org/data_2235 Raw SCOP domain classification 'Raw SCOP domain classification' SubClassOf 'Obsolete concept (EDAM)' 'Raw SCOP domain classification' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2236 Raw CATH domain classification 'Raw CATH domain classification' SubClassOf 'Obsolete concept (EDAM)' 'Raw CATH domain classification' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_3213 Genome indexing (suffix arrays) 'Genome indexing (suffix arrays)' SubClassOf 'Obsolete concept (EDAM)' 'Genome indexing (suffix arrays)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_3212 Genome indexing (Burrows-Wheeler) 'Genome indexing (Burrows-Wheeler)' SubClassOf 'Obsolete concept (EDAM)' 'Genome indexing (Burrows-Wheeler)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://www.geneontology.org/formats/oboInOwl#ObsoleteClass Obsolete concept (EDAM) 'Obsolete concept (EDAM)' SubClassOf 'Obsolete concept (EDAM)' http://edamontology.org/data_2213 Mutation annotation (prevalence) 'Mutation annotation (prevalence)' SubClassOf 'Obsolete concept (EDAM)' 'Mutation annotation (prevalence)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2212 Mutation annotation (basic) 'Mutation annotation (basic)' SubClassOf 'Obsolete concept (EDAM)' 'Mutation annotation (basic)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2215 Mutation annotation (functional) 'Mutation annotation (functional)' SubClassOf 'Obsolete concept (EDAM)' 'Mutation annotation (functional)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2214 Mutation annotation (prognostic) 'Mutation annotation (prognostic)' SubClassOf 'Obsolete concept (EDAM)' 'Mutation annotation (prognostic)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2217 Tumor annotation 'Tumor annotation' SubClassOf 'Obsolete concept (EDAM)' 'Tumor annotation' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2218 Server metadata 'Server metadata' SubClassOf 'Obsolete concept (EDAM)' 'Server metadata' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2289 Sequence identifier (nucleic acid) 'Sequence identifier (nucleic acid)' SubClassOf 'Obsolete concept (EDAM)' 'Sequence identifier (nucleic acid)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2288 Sequence identifier (protein) 'Sequence identifier (protein)' SubClassOf 'Obsolete concept (EDAM)' 'Sequence identifier (protein)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2123 Small molecule data processing 'Small molecule data processing' SubClassOf 'Obsolete concept (EDAM)' 'Small molecule data processing' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2122 Sequence alignment file processing 'Sequence alignment file processing' SubClassOf 'Obsolete concept (EDAM)' 'Sequence alignment file processing' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2120 Listfile processing 'Listfile processing' SubClassOf 'Obsolete concept (EDAM)' 'Listfile processing' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_1768 Nucleic acid folding family identification 'Nucleic acid folding family identification' SubClassOf 'Obsolete concept (EDAM)' 'Nucleic acid folding family identification' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2252 XSLT stylesheet 'XSLT stylesheet' SubClassOf 'Obsolete concept (EDAM)' 'XSLT stylesheet' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2251 Relax-NG schema 'Relax-NG schema' SubClassOf 'Obsolete concept (EDAM)' 'Relax-NG schema' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2250 XML Schema 'XML Schema' SubClassOf 'Obsolete concept (EDAM)' 'XML Schema' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2296 Gene name (AceView) 'Gene name (AceView)' SubClassOf 'Obsolete concept (EDAM)' 'Gene name (AceView)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_1456 Protein membrane regions 'Protein membrane regions' SubClassOf 'Protein domains and folds' 'Protein membrane regions' SubClassOf 'Protein domains' 'Protein membrane regions' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0317 EST and cDNA sequence analysis 'EST and cDNA sequence analysis' SubClassOf 'Obsolete concept (EDAM)' 'EST and cDNA sequence analysis' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0316 Functional profiling 'Functional profiling' SubClassOf 'Obsolete concept (EDAM)' 'Functional profiling' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0312 Sequencing-based expression profile data processing 'Sequencing-based expression profile data processing' SubClassOf 'Obsolete concept (EDAM)' 'Sequencing-based expression profile data processing' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2748 Database name (Osteogenesis) 'Database name (Osteogenesis)' SubClassOf 'Obsolete concept (EDAM)' 'Database name (Osteogenesis)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2018 Annotation 'Annotation' SubClassOf 'Obsolete concept (EDAM)' 'Annotation' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2747 Database name (CMD) 'Database name (CMD)' SubClassOf 'Obsolete concept (EDAM)' 'Database name (CMD)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2740 Gene name (Genolist) 'Gene name (Genolist)' SubClassOf 'Obsolete concept (EDAM)' 'Gene name (Genolist)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2743 Gene name (HUGO) 'Gene name (HUGO)' SubClassOf 'Obsolete concept (EDAM)' 'Gene name (HUGO)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2735 Database name (SwissRegulon) 'Database name (SwissRegulon)' SubClassOf 'Obsolete concept (EDAM)' 'Database name (SwissRegulon)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2733 Genus name (virus) 'Genus name (virus)' SubClassOf 'Obsolete concept (EDAM)' 'Genus name (virus)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2734 Family name (virus) 'Family name (virus)' SubClassOf 'Obsolete concept (EDAM)' 'Family name (virus)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2028 Experimental data 'Experimental data' SubClassOf 'Obsolete concept (EDAM)' 'Experimental data' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2023 Sequence mask parameter 'Sequence mask parameter' SubClassOf 'Obsolete concept (EDAM)' 'Sequence mask parameter' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2022 Vienna RNA structural data 'Vienna RNA structural data' SubClassOf 'Obsolete concept (EDAM)' 'Vienna RNA structural data' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2767 Identifier with metadata 'Identifier with metadata' SubClassOf 'Obsolete concept (EDAM)' 'Identifier with metadata' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2768 Gene symbol annotation 'Gene symbol annotation' SubClassOf 'Obsolete concept (EDAM)' 'Gene symbol annotation' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2763 Locus annotation 'Locus annotation' SubClassOf 'Obsolete concept (EDAM)' 'Locus annotation' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2765 Term ID list 'Term ID list' SubClassOf 'Obsolete concept (EDAM)' 'Term ID list' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2041 Genome version information 'Genome version information' SubClassOf 'Obsolete concept (EDAM)' 'Genome version information' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2046 Nucleic acid sequence record (lite) 'Nucleic acid sequence record (lite)' SubClassOf 'Obsolete concept (EDAM)' 'Nucleic acid sequence record (lite)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2043 Sequence record lite 'Sequence record lite' SubClassOf 'Obsolete concept (EDAM)' 'Sequence record lite' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2754 Gene features report (intron) 'Gene features report (intron)' SubClassOf 'Obsolete concept (EDAM)' 'Gene features report (intron)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2047 Protein sequence record (lite) 'Protein sequence record (lite)' SubClassOf 'Obsolete concept (EDAM)' 'Protein sequence record (lite)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2053 Structural data 'Structural data' SubClassOf 'Obsolete concept (EDAM)' 'Structural data' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_2661 Toxins and targets 'Toxins and targets' SubClassOf 'Toxicology' 'Toxins and targets' SubClassOf 'Small molecules' 'Toxins and targets' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2079 Search parameter 'Search parameter' SubClassOf 'Obsolete concept (EDAM)' 'Search parameter' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2722 Protein features report (disordered structure) 'Protein features report (disordered structure)' SubClassOf 'Obsolete concept (EDAM)' 'Protein features report (disordered structure)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2724 Embryo report 'Embryo report' SubClassOf 'Obsolete concept (EDAM)' 'Embryo report' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2726 Inhibitor annotation 'Inhibitor annotation' SubClassOf 'Obsolete concept (EDAM)' 'Inhibitor annotation' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2081 Secondary structure 'Secondary structure' SubClassOf 'Obsolete concept (EDAM)' 'Secondary structure' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2083 Alignment data 'Alignment data' SubClassOf 'Obsolete concept (EDAM)' 'Alignment data' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_3147 Mass spectrometry experiment 'Mass spectrometry experiment' SubClassOf 'Obsolete concept (EDAM)' 'Mass spectrometry experiment' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_3143 SCOP superfamily 'SCOP superfamily' SubClassOf 'Obsolete concept (EDAM)' 'SCOP superfamily' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_3144 SCOP family 'SCOP family' SubClassOf 'Obsolete concept (EDAM)' 'SCOP family' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_3145 SCOP protein 'SCOP protein' SubClassOf 'Obsolete concept (EDAM)' 'SCOP protein' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_3146 SCOP species 'SCOP species' SubClassOf 'Obsolete concept (EDAM)' 'SCOP species' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_3295 Epigenetics 'Epigenetics' SubClassOf 'Molecular genetics' 'Epigenetics' SubClassOf 'Genetics' http://edamontology.org/data_3140 Nucleic acid features (immunoglobulin gene structure) 'Nucleic acid features (immunoglobulin gene structure)' SubClassOf 'Obsolete concept (EDAM)' 'Nucleic acid features (immunoglobulin gene structure)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_3142 SCOP fold 'SCOP fold' SubClassOf 'Obsolete concept (EDAM)' 'SCOP fold' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_3141 SCOP class 'SCOP class' SubClassOf 'Obsolete concept (EDAM)' 'SCOP class' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1125 Comparison matrix type 'Comparison matrix type' SubClassOf 'Obsolete concept (EDAM)' 'Comparison matrix type' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1121 BLAST sequence alignment type 'BLAST sequence alignment type' SubClassOf 'Obsolete concept (EDAM)' 'BLAST sequence alignment type' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1122 Phylogenetic tree type 'Phylogenetic tree type' SubClassOf 'Obsolete concept (EDAM)' 'Phylogenetic tree type' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1120 Sequence alignment type 'Sequence alignment type' SubClassOf 'Obsolete concept (EDAM)' 'Sequence alignment type' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_3165 NGS experiment 'NGS experiment' SubClassOf 'Obsolete concept (EDAM)' 'NGS experiment' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1152 HIVDB identifier 'HIVDB identifier' SubClassOf 'Obsolete concept (EDAM)' 'HIVDB identifier' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1156 Pathway ID (aMAZE) 'Pathway ID (aMAZE)' SubClassOf 'Obsolete concept (EDAM)' 'Pathway ID (aMAZE)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_3105 Geotemporal metadata 'Geotemporal metadata' SubClassOf 'Obsolete concept (EDAM)' 'Geotemporal metadata' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_3101 Protein domain classification node 'Protein domain classification node' SubClassOf 'Obsolete concept (EDAM)' 'Protein domain classification node' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1906 Quantitative trait locus 'Quantitative trait locus' SubClassOf 'Obsolete concept (EDAM)' 'Quantitative trait locus' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_2542 Protein features (domains) format 'Protein features (domains) format' SubClassOf 'Obsolete concept (EDAM)' 'Protein features (domains) format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_3116 Microarray protocol annotation 'Microarray protocol annotation' SubClassOf 'Obsolete concept (EDAM)' 'Microarray protocol annotation' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_3119 Sequence features (compositionally-biased regions) 'Sequence features (compositionally-biased regions)' SubClassOf 'Obsolete concept (EDAM)' 'Sequence features (compositionally-biased regions)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_3118 Protein features report (topological domains) 'Protein features report (topological domains)' SubClassOf 'Obsolete concept (EDAM)' 'Protein features report (topological domains)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_3122 Nucleic acid features (difference and change) 'Nucleic acid features (difference and change)' SubClassOf 'Obsolete concept (EDAM)' 'Nucleic acid features (difference and change)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_3123 Nucleic acid features report (expression signal) 'Nucleic acid features report (expression signal)' SubClassOf 'Obsolete concept (EDAM)' 'Nucleic acid features report (expression signal)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_3126 Nucleic acid repeats (report) 'Nucleic acid repeats (report)' SubClassOf 'Obsolete concept (EDAM)' 'Nucleic acid repeats (report)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_3125 Nucleic acid features report (binding) 'Nucleic acid features report (binding)' SubClassOf 'Obsolete concept (EDAM)' 'Nucleic acid features report (binding)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_3127 Nucleic acid features report (replication and recombination) 'Nucleic acid features report (replication and recombination)' SubClassOf 'Obsolete concept (EDAM)' 'Nucleic acid features report (replication and recombination)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_2560 STRING entry format 'STRING entry format' SubClassOf 'Obsolete concept (EDAM)' 'STRING entry format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_3129 Protein features report (repeats) 'Protein features report (repeats)' SubClassOf 'Obsolete concept (EDAM)' 'Protein features report (repeats)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_2562 Amino acid identifier format 'Amino acid identifier format' SubClassOf 'Obsolete concept (EDAM)' 'Amino acid identifier format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1101 TREMBL accession 'TREMBL accession' SubClassOf 'Obsolete concept (EDAM)' 'TREMBL accession' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_3135 Nucleic acid features report (signal or transit peptide) 'Nucleic acid features report (signal or transit peptide)' SubClassOf 'Obsolete concept (EDAM)' 'Nucleic acid features report (signal or transit peptide)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_3133 Nucleic acid features (stem loop) 'Nucleic acid features (stem loop)' SubClassOf 'Obsolete concept (EDAM)' 'Nucleic acid features (stem loop)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_3132 Nucleic acid features (d-loop) 'Nucleic acid features (d-loop)' SubClassOf 'Obsolete concept (EDAM)' 'Nucleic acid features (d-loop)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_3139 Nucleic acid features report (STS) 'Nucleic acid features report (STS)' SubClassOf 'Obsolete concept (EDAM)' 'Nucleic acid features report (STS)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_3138 Transcriptional features (report) 'Transcriptional features (report)' SubClassOf 'Obsolete concept (EDAM)' 'Transcriptional features (report)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_3137 Non-coding RNA 'Non-coding RNA' SubClassOf 'Obsolete concept (EDAM)' 'Non-coding RNA' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2009 Ordered locus name 'Ordered locus name' SubClassOf 'Obsolete concept (EDAM)' 'Ordered locus name' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1111 EMBOSS listfile 'EMBOSS listfile' SubClassOf 'Obsolete concept (EDAM)' 'EMBOSS listfile' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1110 EMBOSS sequence type 'EMBOSS sequence type' SubClassOf 'Obsolete concept (EDAM)' 'EMBOSS sequence type' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_3130 Sequence motif matches (protein) 'Sequence motif matches (protein)' SubClassOf 'Obsolete concept (EDAM)' 'Sequence motif matches (protein)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_3131 Sequence motif matches (nucleic acid) 'Sequence motif matches (nucleic acid)' SubClassOf 'Obsolete concept (EDAM)' 'Sequence motif matches (nucleic acid)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_1832 Residue contact calculation (residue-nucleic acid) 'Residue contact calculation (residue-nucleic acid)' SubClassOf 'Obsolete concept (EDAM)' 'Residue contact calculation (residue-nucleic acid)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_1835 Residue contact calculation (residue-negative ion) 'Residue contact calculation (residue-negative ion)' SubClassOf 'Obsolete concept (EDAM)' 'Residue contact calculation (residue-negative ion)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_1826 Full torsion angle calculation 'Full torsion angle calculation' SubClassOf 'Obsolete concept (EDAM)' 'Full torsion angle calculation' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_1825 Backbone torsion angle calculation 'Backbone torsion angle calculation' SubClassOf 'Obsolete concept (EDAM)' 'Backbone torsion angle calculation' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_1828 Tau angle calculation 'Tau angle calculation' SubClassOf 'Obsolete concept (EDAM)' 'Tau angle calculation' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_1827 Cysteine torsion angle calculation 'Cysteine torsion angle calculation' SubClassOf 'Obsolete concept (EDAM)' 'Cysteine torsion angle calculation' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_1845 PDB file sequence retrieval 'PDB file sequence retrieval' SubClassOf 'Obsolete concept (EDAM)' 'PDB file sequence retrieval' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_1846 HET group detection 'HET group detection' SubClassOf 'Obsolete concept (EDAM)' 'HET group detection' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_1841 Rotamer likelihood prediction 'Rotamer likelihood prediction' SubClassOf 'Obsolete concept (EDAM)' 'Rotamer likelihood prediction' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_1842 Proline mutation value calculation 'Proline mutation value calculation' SubClassOf 'Obsolete concept (EDAM)' 'Proline mutation value calculation' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_1838 Residue contact calculation (residue-ligand) 'Residue contact calculation (residue-ligand)' SubClassOf 'Obsolete concept (EDAM)' 'Residue contact calculation (residue-ligand)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_1837 Residue symmetry contact calculation 'Residue symmetry contact calculation' SubClassOf 'Obsolete concept (EDAM)' 'Residue symmetry contact calculation' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_1813 Sequence retrieval 'Sequence retrieval' SubClassOf 'Obsolete concept (EDAM)' 'Sequence retrieval' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_1820 Protein residue surface calculation (vacuum accessible) 'Protein residue surface calculation (vacuum accessible)' SubClassOf 'Obsolete concept (EDAM)' 'Protein residue surface calculation (vacuum accessible)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_1823 Protein surface calculation (accessible molecular) 'Protein surface calculation (accessible molecular)' SubClassOf 'Obsolete concept (EDAM)' 'Protein surface calculation (accessible molecular)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_1824 Protein surface calculation (accessible) 'Protein surface calculation (accessible)' SubClassOf 'Obsolete concept (EDAM)' 'Protein surface calculation (accessible)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_1821 Protein residue surface calculation (accessible molecular) 'Protein residue surface calculation (accessible molecular)' SubClassOf 'Obsolete concept (EDAM)' 'Protein residue surface calculation (accessible molecular)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_1822 Protein residue surface calculation (vacuum molecular) 'Protein residue surface calculation (vacuum molecular)' SubClassOf 'Obsolete concept (EDAM)' 'Protein residue surface calculation (vacuum molecular)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_1817 Protein atom surface calculation (accessible) 'Protein atom surface calculation (accessible)' SubClassOf 'Obsolete concept (EDAM)' 'Protein atom surface calculation (accessible)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_1814 Structure retrieval 'Structure retrieval' SubClassOf 'Obsolete concept (EDAM)' 'Structure retrieval' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_1819 Protein residue surface calculation (accessible) 'Protein residue surface calculation (accessible)' SubClassOf 'Obsolete concept (EDAM)' 'Protein residue surface calculation (accessible)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_1818 Protein atom surface calculation (accessible molecular) 'Protein atom surface calculation (accessible molecular)' SubClassOf 'Obsolete concept (EDAM)' 'Protein atom surface calculation (accessible molecular)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2496 Gene regulatory network processing 'Gene regulatory network processing' SubClassOf 'Obsolete concept (EDAM)' 'Gene regulatory network processing' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2498 Sequencing-based expression profile data analysis 'Sequencing-based expression profile data analysis' SubClassOf 'Obsolete concept (EDAM)' 'Sequencing-based expression profile data analysis' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2491 Hydrogen bond calculation (inter-residue) 'Hydrogen bond calculation (inter-residue)' SubClassOf 'Obsolete concept (EDAM)' 'Hydrogen bond calculation (inter-residue)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2493 Codon usage data processing 'Codon usage data processing' SubClassOf 'Obsolete concept (EDAM)' 'Codon usage data processing' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2490 Residue contact calculation (residue-residue) 'Residue contact calculation (residue-residue)' SubClassOf 'Obsolete concept (EDAM)' 'Residue contact calculation (residue-residue)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2482 Secondary structure processing 'Secondary structure processing' SubClassOf 'Obsolete concept (EDAM)' 'Secondary structure processing' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2483 Structure comparison 'Structure comparison' SubClassOf 'has topic' some 'Structure comparison' 'Structure comparison' SubClassOf 'has topic' some 'Structure analysis' http://edamontology.org/operation_3084 Protein function prediction (from sequence) 'Protein function prediction (from sequence)' SubClassOf 'Obsolete concept (EDAM)' 'Protein function prediction (from sequence)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2470 Data retrieval (protein family annotation) 'Data retrieval (protein family annotation)' SubClassOf 'Obsolete concept (EDAM)' 'Data retrieval (protein family annotation)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2471 Data retrieval (RNA family annotation) 'Data retrieval (RNA family annotation)' SubClassOf 'Obsolete concept (EDAM)' 'Data retrieval (RNA family annotation)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2472 Data retrieval (gene annotation) 'Data retrieval (gene annotation)' SubClassOf 'Obsolete concept (EDAM)' 'Data retrieval (gene annotation)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2473 Data retrieval (genotype and phenotype annotation) 'Data retrieval (genotype and phenotype annotation)' SubClassOf 'Obsolete concept (EDAM)' 'Data retrieval (genotype and phenotype annotation)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_3090 Protein feature prediction (from structure) 'Protein feature prediction (from structure)' SubClassOf 'Obsolete concept (EDAM)' 'Protein feature prediction (from structure)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_3093 Database search (by sequence) 'Database search (by sequence)' SubClassOf 'Obsolete concept (EDAM)' 'Database search (by sequence)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_1847 DSSP secondary structure assignment 'DSSP secondary structure assignment' SubClassOf 'Obsolete concept (EDAM)' 'DSSP secondary structure assignment' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_1848 Structure formatting 'Structure formatting' SubClassOf 'Obsolete concept (EDAM)' 'Structure formatting' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2468 Data retrieval (phylogenetic tree) 'Data retrieval (phylogenetic tree)' SubClassOf 'Obsolete concept (EDAM)' 'Data retrieval (phylogenetic tree)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2469 Data retrieval (protein interaction annotation) 'Data retrieval (protein interaction annotation)' SubClassOf 'Obsolete concept (EDAM)' 'Data retrieval (protein interaction annotation)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2466 Map annotation 'Map annotation' SubClassOf 'Obsolete concept (EDAM)' 'Map annotation' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2467 Data retrieval (protein annotation) 'Data retrieval (protein annotation)' SubClassOf 'Obsolete concept (EDAM)' 'Data retrieval (protein annotation)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_3086 Nucleic acid sequence composition (report) 'Nucleic acid sequence composition (report)' SubClassOf 'Obsolete concept (EDAM)' 'Nucleic acid sequence composition (report)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2460 Protein atom surface calculation 'Protein atom surface calculation' SubClassOf 'Obsolete concept (EDAM)' 'Protein atom surface calculation' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2461 Protein residue surface calculation 'Protein residue surface calculation' SubClassOf 'Obsolete concept (EDAM)' 'Protein residue surface calculation' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_3085 Protein sequence composition 'Protein sequence composition' SubClassOf 'Obsolete concept (EDAM)' 'Protein sequence composition' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2465 Structure processing 'Structure processing' SubClassOf 'Obsolete concept (EDAM)' 'Structure processing' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2462 Protein surface calculation 'Protein surface calculation' SubClassOf 'Obsolete concept (EDAM)' 'Protein surface calculation' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2463 Sequence alignment processing 'Sequence alignment processing' SubClassOf 'Obsolete concept (EDAM)' 'Sequence alignment processing' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2453 Feature table processing 'Feature table processing' SubClassOf 'Obsolete concept (EDAM)' 'Feature table processing' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2452 Sequence cluster processing 'Sequence cluster processing' SubClassOf 'Obsolete concept (EDAM)' 'Sequence cluster processing' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0385 Protein hydropathy cluster calculation 'Protein hydropathy cluster calculation' SubClassOf 'Obsolete concept (EDAM)' 'Protein hydropathy cluster calculation' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0383 Protein hydropathy calculation (from structure) 'Protein hydropathy calculation (from structure)' SubClassOf 'Obsolete concept (EDAM)' 'Protein hydropathy calculation (from structure)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0388 Protein binding site prediction (from structure) 'Protein binding site prediction (from structure)' SubClassOf 'Obsolete concept (EDAM)' 'Protein binding site prediction (from structure)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2459 Structure processing (protein) 'Structure processing (protein)' SubClassOf 'Obsolete concept (EDAM)' 'Structure processing (protein)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2440 Structure processing (RNA) 'Structure processing (RNA)' SubClassOf 'Obsolete concept (EDAM)' 'Structure processing (RNA)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2443 Phylogenetic tree processing 'Phylogenetic tree processing' SubClassOf 'Obsolete concept (EDAM)' 'Phylogenetic tree processing' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0395 Residue non-canonical interaction detection 'Residue non-canonical interaction detection' SubClassOf 'Obsolete concept (EDAM)' 'Residue non-canonical interaction detection' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2448 Sequence processing (nucleic acid) 'Sequence processing (nucleic acid)' SubClassOf 'Obsolete concept (EDAM)' 'Sequence processing (nucleic acid)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2445 Protein interaction network processing 'Protein interaction network processing' SubClassOf 'Obsolete concept (EDAM)' 'Protein interaction network processing' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2444 Protein secondary structure processing 'Protein secondary structure processing' SubClassOf 'Obsolete concept (EDAM)' 'Protein secondary structure processing' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2447 Sequence processing (protein) 'Sequence processing (protein)' SubClassOf 'Obsolete concept (EDAM)' 'Sequence processing (protein)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2446 Sequence processing 'Sequence processing' SubClassOf 'Obsolete concept (EDAM)' 'Sequence processing' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0360 Structural similarity search 'Structural similarity search' SubClassOf 'has topic' some 'Structure comparison' http://edamontology.org/operation_2432 Microarray data processing 'Microarray data processing' SubClassOf 'Obsolete concept (EDAM)' 'Microarray data processing' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2435 Gene expression profile processing 'Gene expression profile processing' SubClassOf 'Obsolete concept (EDAM)' 'Gene expression profile processing' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2434 Data retrieval (codon usage table) 'Data retrieval (codon usage table)' SubClassOf 'Obsolete concept (EDAM)' 'Data retrieval (codon usage table)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2438 Pathway or network processing 'Pathway or network processing' SubClassOf 'Obsolete concept (EDAM)' 'Pathway or network processing' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2420 Operation (typed) 'Operation (typed)' SubClassOf 'Obsolete concept (EDAM)' 'Operation (typed)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0377 Sequence composition calculation (nucleic acid) 'Sequence composition calculation (nucleic acid)' SubClassOf 'Obsolete concept (EDAM)' 'Sequence composition calculation (nucleic acid)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2427 Data handling 'Data handling' SubClassOf 'Obsolete concept (EDAM)' 'Data handling' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0378 Sequence composition calculation (protein) 'Sequence composition calculation (protein)' SubClassOf 'Obsolete concept (EDAM)' 'Sequence composition calculation (protein)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2409 File handling 'File handling' SubClassOf 'Analysis' 'File handling' SubClassOf 'Operation' http://edamontology.org/operation_2408 Sequence feature analysis 'Sequence feature analysis' SubClassOf 'Obsolete concept (EDAM)' 'Sequence feature analysis' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0345 Sequence retrieval (by keyword) 'Sequence retrieval (by keyword)' SubClassOf 'Obsolete concept (EDAM)' 'Sequence retrieval (by keyword)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2417 Physicochemical property data processing 'Physicochemical property data processing' SubClassOf 'Obsolete concept (EDAM)' 'Physicochemical property data processing' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0343 Transmembrane protein database search 'Transmembrane protein database search' SubClassOf 'Obsolete concept (EDAM)' 'Transmembrane protein database search' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0344 Sequence retrieval (by code) 'Sequence retrieval (by code)' SubClassOf 'Obsolete concept (EDAM)' 'Sequence retrieval (by code)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2413 Sequence profile processing 'Sequence profile processing' SubClassOf 'Obsolete concept (EDAM)' 'Sequence profile processing' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0347 Sequence database search (by motif or pattern) 'Sequence database search (by motif or pattern)' SubClassOf 'Obsolete concept (EDAM)' 'Sequence database search (by motif or pattern)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2411 Structural profile processing 'Structural profile processing' SubClassOf 'Obsolete concept (EDAM)' 'Structural profile processing' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0348 Sequence database search (by amino acid composition) 'Sequence database search (by amino acid composition)' SubClassOf 'Obsolete concept (EDAM)' 'Sequence database search (by amino acid composition)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2412 Data index processing 'Data index processing' SubClassOf 'Obsolete concept (EDAM)' 'Data index processing' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2410 Gene expression analysis 'Gene expression analysis' SubClassOf 'Obsolete concept (EDAM)' 'Gene expression analysis' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0341 Motif database search 'Motif database search' SubClassOf 'Obsolete concept (EDAM)' 'Motif database search' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0342 Sequence profile database search 'Sequence profile database search' SubClassOf 'Obsolete concept (EDAM)' 'Sequence profile database search' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0340 Protein secondary database search 'Protein secondary database search' SubClassOf 'Obsolete concept (EDAM)' 'Protein secondary database search' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2788 Sequence profile data 'Sequence profile data' SubClassOf 'Obsolete concept (EDAM)' 'Sequence profile data' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0354 Sequence database search (by sequence for primer sequences) 'Sequence database search (by sequence for primer sequences)' SubClassOf 'Obsolete concept (EDAM)' 'Sequence database search (by sequence for primer sequences)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2404 Sequence motif processing 'Sequence motif processing' SubClassOf 'Obsolete concept (EDAM)' 'Sequence motif processing' SubClassOf 'Sequence analysis' http://edamontology.org/operation_0355 Sequence database search (by molecular weight) 'Sequence database search (by molecular weight)' SubClassOf 'Obsolete concept (EDAM)' 'Sequence database search (by molecular weight)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2405 Protein interaction data processing 'Protein interaction data processing' SubClassOf 'Obsolete concept (EDAM)' 'Protein interaction data processing' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0356 Sequence database search (by isoelectric point) 'Sequence database search (by isoelectric point)' SubClassOf 'Obsolete concept (EDAM)' 'Sequence database search (by isoelectric point)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0357 Structure retrieval (by code) 'Structure retrieval (by code)' SubClassOf 'Obsolete concept (EDAM)' 'Structure retrieval (by code)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2407 Annotation processing 'Annotation processing' SubClassOf 'Obsolete concept (EDAM)' 'Annotation processing' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0358 Structure retrieval (by keyword) 'Structure retrieval (by keyword)' SubClassOf 'Obsolete concept (EDAM)' 'Structure retrieval (by keyword)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0359 Structure database search (by sequence) 'Structure database search (by sequence)' SubClassOf 'Obsolete concept (EDAM)' 'Structure database search (by sequence)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0350 Sequence database search (by sequence using word-based methods) 'Sequence database search (by sequence using word-based methods)' SubClassOf 'Obsolete concept (EDAM)' 'Sequence database search (by sequence using word-based methods)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0351 Sequence database search (by sequence using profile-based methods) 'Sequence database search (by sequence using profile-based methods)' SubClassOf 'Obsolete concept (EDAM)' 'Sequence database search (by sequence using profile-based methods)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0352 Sequence database search (by sequence using local alignment-based methods) 'Sequence database search (by sequence using local alignment-based methods)' SubClassOf 'Obsolete concept (EDAM)' 'Sequence database search (by sequence using local alignment-based methods)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0353 Sequence database search (by sequence using global alignment-based methods) 'Sequence database search (by sequence using global alignment-based methods)' SubClassOf 'Obsolete concept (EDAM)' 'Sequence database search (by sequence using global alignment-based methods)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0318 Structural genomics target selection 'Structural genomics target selection' SubClassOf 'Obsolete concept (EDAM)' 'Structural genomics target selection' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0332 Immunogen design 'Immunogen design' SubClassOf 'Obsolete concept (EDAM)' 'Immunogen design' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0330 Protein SNP mapping 'Protein SNP mapping' SubClassOf 'Obsolete concept (EDAM)' 'Protein SNP mapping' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1890 Gene name (Arabidopsis) 'Gene name (Arabidopsis)' SubClassOf 'Obsolete concept (EDAM)' 'Gene name (Arabidopsis)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1892 Gene name (GeneFarm) 'Gene name (GeneFarm)' SubClassOf 'Obsolete concept (EDAM)' 'Gene name (GeneFarm)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0414 Protein feature prediction (from sequence) 'Protein feature prediction (from sequence)' SubClassOf 'Obsolete concept (EDAM)' 'Protein feature prediction (from sequence)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0413 MHC peptide immunogenicity prediction 'MHC peptide immunogenicity prediction' SubClassOf 'Obsolete concept (EDAM)' 'MHC peptide immunogenicity prediction' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2880 Secondary structure image 'Secondary structure image' SubClassOf 'Obsolete concept (EDAM)' 'Secondary structure image' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2881 Secondary structure report 'Secondary structure report' SubClassOf 'Obsolete concept (EDAM)' 'Secondary structure report' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2882 DNA features 'DNA features' SubClassOf 'Obsolete concept (EDAM)' 'DNA features' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2883 RNA features report 'RNA features report' SubClassOf 'Obsolete concept (EDAM)' 'RNA features report' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2885 Nucleic acid features report (polymorphism) 'Nucleic acid features report (polymorphism)' SubClassOf 'Obsolete concept (EDAM)' 'Nucleic acid features report (polymorphism)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2888 Protein sequence record (full) 'Protein sequence record (full)' SubClassOf 'Obsolete concept (EDAM)' 'Protein sequence record (full)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2889 Nucleic acid sequence record (full) 'Nucleic acid sequence record (full) ' SubClassOf 'Obsolete concept (EDAM)' 'Nucleic acid sequence record (full) ' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1880 Misnomer 'Misnomer' SubClassOf 'Obsolete concept (EDAM)' 'Misnomer' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0401 Protein hydropathy calculation (from sequence) 'Protein hydropathy calculation (from sequence)' SubClassOf 'Obsolete concept (EDAM)' 'Protein hydropathy calculation (from sequence)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1884 UniProt keywords 'UniProt keywords' SubClassOf 'Obsolete concept (EDAM)' 'UniProt keywords' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1888 Gene ID (MIPS Medicago) 'Gene ID (MIPS Medicago)' SubClassOf 'Obsolete concept (EDAM)' 'Gene ID (MIPS Medicago)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1889 Gene name (DragonDB) 'Gene name (DragonDB)' SubClassOf 'Obsolete concept (EDAM)' 'Gene name (DragonDB)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1887 Gene ID (MIPS Maize) 'Gene ID (MIPS Maize)' SubClassOf 'Obsolete concept (EDAM)' 'Gene ID (MIPS Maize)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2874 Sequence set (polymorphic) 'Sequence set (polymorphic)' SubClassOf 'Obsolete concept (EDAM)' 'Sequence set (polymorphic)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2875 DRCAT resource 'DRCAT resource' SubClassOf 'Obsolete concept (EDAM)' 'DRCAT resource' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_2754 Introns 'Introns' SubClassOf 'Gene transcript features' 'Introns' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2869 Nucleic acid features report (RFLP) 'Nucleic acid features report (RFLP)' SubClassOf 'Obsolete concept (EDAM)' 'Nucleic acid features report (RFLP)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2866 Northern blot report 'Northern blot report' SubClassOf 'Obsolete concept (EDAM)' 'Northern blot report' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2867 Nucleic acid features report (VNTR) 'Nucleic acid features report (VNTR)' SubClassOf 'Obsolete concept (EDAM)' 'Nucleic acid features report (VNTR)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2868 Nucleic acid features report (microsatellite) 'Nucleic acid features report (microsatellite)' SubClassOf 'Obsolete concept (EDAM)' 'Nucleic acid features report (microsatellite)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0425 Whole gene prediction 'Whole gene prediction' SubClassOf 'Obsolete concept (EDAM)' 'Whole gene prediction' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0424 Epitope mapping (MHC Class II) 'Epitope mapping (MHC Class II)' SubClassOf 'Obsolete concept (EDAM)' 'Epitope mapping (MHC Class II)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0426 Gene component prediction 'Gene component prediction' SubClassOf 'Obsolete concept (EDAM)' 'Gene component prediction' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1099 UniProt accession (extended) 'UniProt accession (extended)' SubClassOf 'Obsolete concept (EDAM)' 'UniProt accession (extended)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0423 Epitope mapping (MHC Class I) 'Epitope mapping (MHC Class I)' SubClassOf 'Obsolete concept (EDAM)' 'Epitope mapping (MHC Class I)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_3346 Sequence search 'Sequence search' SubClassOf 'Obsolete concept (EDAM)' 'Sequence search' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1094 Sequence type 'Sequence type' SubClassOf 'Obsolete concept (EDAM)' 'Sequence type' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2857 Article metadata 'Article metadata' SubClassOf 'Obsolete concept (EDAM)' 'Article metadata' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0419 Protein binding site prediction (from sequence) 'Protein binding site prediction (from sequence)' SubClassOf 'Obsolete concept (EDAM)' 'Protein binding site prediction (from sequence)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1853 Chromosome annotation (aberration) 'Chromosome annotation (aberration)' SubClassOf 'Obsolete concept (EDAM)' 'Chromosome annotation (aberration)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1065 Sequence signature identifier 'Sequence signature identifier' SubClassOf 'Obsolete concept (EDAM)' 'Sequence signature identifier' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1067 Phylogenetic distance matrix identifier 'Phylogenetic distance matrix identifier' SubClassOf 'Obsolete concept (EDAM)' 'Phylogenetic distance matrix identifier' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1852 Sequence assembly component 'Sequence assembly component' SubClassOf 'Obsolete concept (EDAM)' 'Sequence assembly component' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1062 Database entry identifier 'Database entry identifier' SubClassOf 'Obsolete concept (EDAM)' 'Database entry identifier' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2832 Web portal 'Web portal' SubClassOf 'Obsolete concept (EDAM)' 'Web portal' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2838 Experimental data (proteomics) 'Experimental data (proteomics)' SubClassOf 'Obsolete concept (EDAM)' 'Experimental data (proteomics)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2831 Databank 'Databank' SubClassOf 'Obsolete concept (EDAM)' 'Databank' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_3323 Metabolic disease 'Metabolic disease' SubClassOf 'Obsolete concept (EDAM)' 'Metabolic disease' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_3321 Molecular genetics 'Molecular genetics' SubClassOf 'Computational biology' http://edamontology.org/topic_3320 RNA splicing 'RNA splicing' SubClassOf 'Molecular genetics' 'RNA splicing' SubClassOf 'Gene expression' http://edamontology.org/data_1879 Acronym 'Acronym' SubClassOf 'Obsolete concept (EDAM)' 'Acronym' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1878 Misspelling 'Misspelling' SubClassOf 'Obsolete concept (EDAM)' 'Misspelling' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1877 Synonym 'Synonym' SubClassOf 'Obsolete concept (EDAM)' 'Synonym' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1866 Map type 'Map type' SubClassOf 'Obsolete concept (EDAM)' 'Map type' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1865 Map feature 'Map feature' SubClassOf 'Obsolete concept (EDAM)' 'Map feature' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1057 Sequence database name 'Sequence database name' SubClassOf 'Obsolete concept (EDAM)' 'Sequence database name' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1806 Gene synonym 'Gene synonym' SubClassOf 'Obsolete concept (EDAM)' 'Gene synonym' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1024 Codon name 'Codon name' SubClassOf 'Obsolete concept (EDAM)' 'Codon name' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1028 Gene identifier (NCBI RefSeq) 'Gene identifier (NCBI RefSeq)' SubClassOf 'Obsolete concept (EDAM)' 'Gene identifier (NCBI RefSeq)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1029 Gene identifier (NCBI UniGene) 'Gene identifier (NCBI UniGene)' SubClassOf 'Obsolete concept (EDAM)' 'Gene identifier (NCBI UniGene)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1030 Gene identifier (Entrez) 'Gene identifier (Entrez)' SubClassOf 'Obsolete concept (EDAM)' 'Gene identifier (Entrez)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1800 Gene ID (GeneDB Schizosaccharomyces pombe) 'Gene ID (GeneDB Schizosaccharomyces pombe)' SubClassOf 'Obsolete concept (EDAM)' 'Gene ID (GeneDB Schizosaccharomyces pombe)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1801 Gene ID (GeneDB Trypanosoma brucei) 'Gene ID (GeneDB Trypanosoma brucei)' SubClassOf 'Obsolete concept (EDAM)' 'Gene ID (GeneDB Trypanosoma brucei)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_3026 GO concept name (biological process) 'GO concept name (biological process)' SubClassOf 'Obsolete concept (EDAM)' 'GO concept name (biological process)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_3027 GO concept name (molecular function) 'GO concept name (molecular function)' SubClassOf 'Obsolete concept (EDAM)' 'GO concept name (molecular function)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1014 Sequence position specification 'Sequence position specification' SubClassOf 'Obsolete concept (EDAM)' 'Sequence position specification' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_3031 Core data 'Core data' SubClassOf 'Obsolete concept (EDAM)' 'Core data' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1018 Nucleic acid feature identifier 'Nucleic acid feature identifier' SubClassOf 'Obsolete concept (EDAM)' 'Nucleic acid feature identifier' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1019 Protein feature identifier 'Protein feature identifier' SubClassOf 'Obsolete concept (EDAM)' 'Protein feature identifier' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0486 Functional mapping 'Functional mapping' SubClassOf 'Obsolete concept (EDAM)' 'Functional mapping' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0494 Pairwise sequence alignment generation (global) 'Pairwise sequence alignment generation (global)' SubClassOf 'Obsolete concept (EDAM)' 'Pairwise sequence alignment generation (global)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0493 Pairwise sequence alignment generation (local) 'Pairwise sequence alignment generation (local)' SubClassOf 'Obsolete concept (EDAM)' 'Pairwise sequence alignment generation (local)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0594 Sequence classification 'Sequence classification' SubClassOf 'Obsolete concept (EDAM)' 'Sequence classification' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0595 Protein classification 'Protein classification' SubClassOf 'Obsolete concept (EDAM)' 'Protein classification' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0598 Sequence motif or profile 'Sequence motif or profile' SubClassOf 'Obsolete concept (EDAM)' 'Sequence motif or profile' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0452 Indel detection 'Indel detection' SubClassOf 'Mutation detection' http://edamontology.org/operation_0453 Nucleosome formation potential prediction 'Nucleosome formation potential prediction' SubClassOf 'Obsolete concept (EDAM)' 'Nucleosome formation potential prediction' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_1913 Residue validation 'Residue validation' SubClassOf 'Obsolete concept (EDAM)' 'Residue validation' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_1914 Structure retrieval (water) 'Structure retrieval (water)' SubClassOf 'Obsolete concept (EDAM)' 'Structure retrieval (water)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1729 GO (cellular component) 'GO (cellular component)' SubClassOf 'Obsolete concept (EDAM)' 'GO (cellular component)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1730 Ontology relation type 'Ontology relation type' SubClassOf 'Obsolete concept (EDAM)' 'Ontology relation type' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1733 Ontology concept reference 'Ontology concept reference' SubClassOf 'Obsolete concept (EDAM)' 'Ontology concept reference' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1732 Ontology concept comment 'Ontology concept comment' SubClassOf 'Obsolete concept (EDAM)' 'Ontology concept comment' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1738 doc2loc document information 'doc2loc document information' SubClassOf 'Obsolete concept (EDAM)' 'doc2loc document information' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1718 HGNC 'HGNC' SubClassOf 'Obsolete concept (EDAM)' 'HGNC' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1719 NCBI taxonomy vocabulary 'NCBI taxonomy vocabulary' SubClassOf 'Obsolete concept (EDAM)' 'NCBI taxonomy vocabulary' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1720 Plant ontology term 'Plant ontology term' SubClassOf 'Obsolete concept (EDAM)' 'Plant ontology term' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1724 ChEBI 'ChEBI' SubClassOf 'Obsolete concept (EDAM)' 'ChEBI' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1723 EMAP 'EMAP' SubClassOf 'Obsolete concept (EDAM)' 'EMAP' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1722 FMA 'FMA' SubClassOf 'Obsolete concept (EDAM)' 'FMA' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1721 UMLS 'UMLS' SubClassOf 'Obsolete concept (EDAM)' 'UMLS' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1728 GO (molecular function) 'GO (molecular function)' SubClassOf 'Obsolete concept (EDAM)' 'GO (molecular function)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1727 GO (biological process) 'GO (biological process)' SubClassOf 'Obsolete concept (EDAM)' 'GO (biological process)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1726 myGrid 'myGrid' SubClassOf 'Obsolete concept (EDAM)' 'myGrid' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1725 MGED 'MGED' SubClassOf 'Obsolete concept (EDAM)' 'MGED' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1798 Gene ID (GeneDB Leishmania major) 'Gene ID (GeneDB Leishmania major)' SubClassOf 'Obsolete concept (EDAM)' 'Gene ID (GeneDB Leishmania major)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1799 Gene ID (GeneDB Plasmodium falciparum) 'Gene ID (GeneDB Plasmodium falciparum)' SubClassOf 'Obsolete concept (EDAM)' 'Gene ID (GeneDB Plasmodium falciparum)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1797 Gene ID (GeneDB Glossina morsitans) 'Gene ID (GeneDB Glossina morsitans)' SubClassOf 'Obsolete concept (EDAM)' 'Gene ID (GeneDB Glossina morsitans)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1790 Gene name (CGSC) 'Gene name (CGSC)' SubClassOf 'Obsolete concept (EDAM)' 'Gene name (CGSC)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1791 Gene name (HGNC) 'Gene name (HGNC)' SubClassOf 'Obsolete concept (EDAM)' 'Gene name (HGNC)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1792 Gene name (MGD) 'Gene name (MGD)' SubClassOf 'Obsolete concept (EDAM)' 'Gene name (MGD)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1793 Gene name (Bacillus subtilis) 'Gene name (Bacillus subtilis)' SubClassOf 'Obsolete concept (EDAM)' 'Gene name (Bacillus subtilis)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_2867 VNTR 'VNTR' SubClassOf 'DNA polymorphism' 'VNTR' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_2868 Microsatellites 'Microsatellites' SubClassOf 'DNA polymorphism' 'Microsatellites' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_2869 RFLP 'RFLP' SubClassOf 'DNA polymorphism' 'RFLP' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1789 Gene name (TGD) 'Gene name (TGD)' SubClassOf 'Obsolete concept (EDAM)' 'Gene name (TGD)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1787 Gene name (MaizeGDB) 'Gene name (MaizeGDB)' SubClassOf 'Obsolete concept (EDAM)' 'Gene name (MaizeGDB)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1788 Gene name (SGD) 'Gene name (SGD)' SubClassOf 'Obsolete concept (EDAM)' 'Gene name (SGD)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1785 Gene name (dictyBase) 'Gene name (dictyBase)' SubClassOf 'Obsolete concept (EDAM)' 'Gene name (dictyBase)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1786 Gene name (EcoGene primary) 'Gene name (EcoGene primary)' SubClassOf 'Obsolete concept (EDAM)' 'Gene name (EcoGene primary)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1783 Gene name (ASPGD) 'Gene name (ASPGD)' SubClassOf 'Obsolete concept (EDAM)' 'Gene name (ASPGD)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1784 Gene name (CGD) 'Gene name (CGD)' SubClassOf 'Obsolete concept (EDAM)' 'Gene name (CGD)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2524 Protein data 'Protein data' SubClassOf 'Obsolete concept (EDAM)' 'Protein data' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2525 Nucleic acid data 'Nucleic acid data' SubClassOf 'Obsolete concept (EDAM)' 'Nucleic acid data' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2528 Molecular data 'Molecular data' SubClassOf 'Obsolete concept (EDAM)' 'Molecular data' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2529 Molecule report 'Molecule report' SubClassOf 'Obsolete concept (EDAM)' 'Molecule report' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2522 Map data 'Map data' SubClassOf 'Obsolete concept (EDAM)' 'Map data' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1776 Protein report (function) 'Protein report (function)' SubClassOf 'Obsolete concept (EDAM)' 'Protein report (function)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1767 CATH domain sequences (COMBS) 'CATH domain sequences (COMBS)' SubClassOf 'Obsolete concept (EDAM)' 'CATH domain sequences (COMBS)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1765 CATH representative domain sequences (COMBS) 'CATH representative domain sequences (COMBS)' SubClassOf 'Obsolete concept (EDAM)' 'CATH representative domain sequences (COMBS)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_2842 High-throughput sequencing 'High-throughput sequencing' SubClassOf 'Obsolete concept (EDAM)' 'High-throughput sequencing' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1766 CATH domain sequences (ATOM) 'CATH domain sequences (ATOM)' SubClassOf 'Obsolete concept (EDAM)' 'CATH domain sequences (ATOM)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_2844 Structural clustering 'Structural clustering' SubClassOf 'Obsolete concept (EDAM)' 'Structural clustering' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_2846 Gene regulatory networks 'Gene regulatory networks' SubClassOf 'Molecular interactions, pathways and networks' 'Gene regulatory networks' SubClassOf 'Gene regulation' 'Gene regulatory networks' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_2847 Disease (specific) 'Disease (specific)' SubClassOf 'Obsolete concept (EDAM)' 'Disease (specific)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1764 CATH representative domain sequences (ATOM) 'CATH representative domain sequences (ATOM)' SubClassOf 'Obsolete concept (EDAM)' 'CATH representative domain sequences (ATOM)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1762 CATH domain report 'CATH domain report' SubClassOf 'Obsolete concept (EDAM)' 'CATH domain report' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_2839 Molecules 'Molecules' SubClassOf 'Obsolete concept (EDAM)' 'Molecules' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_2829 Ontologies, nomenclature and classification 'Ontologies, nomenclature and classification' SubClassOf 'Obsolete concept (EDAM)' 'Ontologies, nomenclature and classification' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_2826 Protein structure alignment 'Protein structure alignment' SubClassOf 'Obsolete concept (EDAM)' 'Protein structure alignment' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_2816 Gene resources 'Gene resources' SubClassOf 'Obsolete concept (EDAM)' 'Gene resources' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_2817 Yeast 'Yeast' SubClassOf 'Obsolete concept (EDAM)' 'Yeast' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_3038 Structure databases 'Structure databases' SubClassOf 'Obsolete concept (EDAM)' 'Structure databases' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_3039 Nucleic acid structure 'Nucleic acid structure' SubClassOf 'Obsolete concept (EDAM)' 'Nucleic acid structure' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_2811 Nomenclature 'Nomenclature' SubClassOf 'Obsolete concept (EDAM)' 'Nomenclature' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_2814 Protein structure analysis 'Protein structure analysis' SubClassOf 'Proteins' http://edamontology.org/topic_2813 Disease genes and proteins 'Disease genes and proteins' SubClassOf 'Obsolete concept (EDAM)' 'Disease genes and proteins' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_3032 Primer or probe design 'Primer or probe design' SubClassOf 'Obsolete concept (EDAM)' 'Primer or probe design' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_2807 Tool topic 'Tool topic' SubClassOf 'Obsolete concept (EDAM)' 'Tool topic' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_2809 Study topic 'Study topic' SubClassOf 'Obsolete concept (EDAM)' 'Study topic' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_3042 Nucleic acid sequences 'Nucleic acid sequences' SubClassOf 'Obsolete concept (EDAM)' 'Nucleic acid sequences' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_3041 Sequence databases 'Sequence databases' SubClassOf 'Obsolete concept (EDAM)' 'Sequence databases' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_3044 Protein interaction networks 'Protein interaction networks' SubClassOf 'Obsolete concept (EDAM)' 'Protein interaction networks' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_3043 Protein sequences 'Protein sequences' SubClassOf 'Obsolete concept (EDAM)' 'Protein sequences' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_3048 Mammals 'Mammals' SubClassOf 'Obsolete concept (EDAM)' 'Mammals' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1716 GO 'GO' SubClassOf 'Obsolete concept (EDAM)' 'GO' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1717 MeSH 'MeSH' SubClassOf 'Obsolete concept (EDAM)' 'MeSH' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1715 BioPax term 'BioPax term' SubClassOf 'Obsolete concept (EDAM)' 'BioPax term' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_3052 Sequence clusters and classification 'Sequence clusters and classification' SubClassOf 'Obsolete concept (EDAM)' 'Sequence clusters and classification' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_3060 Regulatory RNA 'Regulatory RNA' SubClassOf 'Obsolete concept (EDAM)' 'Regulatory RNA' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_3061 Documentation and help 'Documentation and help' SubClassOf 'Literature and reference' 'Documentation and help' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_3062 Genetic organisation 'Genetic organisation' SubClassOf 'Obsolete concept (EDAM)' 'Genetic organisation' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_3072 Sequence feature detection 'Sequence feature detection' SubClassOf 'Obsolete concept (EDAM)' 'Sequence feature detection' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_3073 Nucleic acid feature detection 'Nucleic acid feature detection' SubClassOf 'Obsolete concept (EDAM)' 'Nucleic acid feature detection' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_3074 Protein feature detection 'Protein feature detection' SubClassOf 'Obsolete concept (EDAM)' 'Protein feature detection' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_3075 Biological system modelling 'Biological system modelling' SubClassOf 'Obsolete concept (EDAM)' 'Biological system modelling' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_3078 Genes and proteins resources 'Genes and proteins resources' SubClassOf 'Obsolete concept (EDAM)' 'Genes and proteins resources' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_1770 Structure comparison 'Structure comparison' SubClassOf 'Structure analysis' 'Structure comparison' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0644 Proteome 'Proteome' SubClassOf 'Obsolete concept (EDAM)' 'Proteome' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0642 Low complexity sequences 'Low complexity sequences' SubClassOf 'Obsolete concept (EDAM)' 'Low complexity sequences' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0641 Repeat sequences 'Repeat sequences' SubClassOf 'Obsolete concept (EDAM)' 'Repeat sequences' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0640 Nucleic acid sequence analysis 'Nucleic acid sequence analysis' SubClassOf 'Obsolete concept (EDAM)' 'Nucleic acid sequence analysis' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0655 Coding RNA 'Coding RNA' SubClassOf 'Gene transcript features' 'Coding RNA' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0629 Gene expression and microarray 'Gene expression and microarray' SubClassOf 'Obsolete concept (EDAM)' 'Gene expression and microarray' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0620 Drugs and target structures 'Drugs and target structures' SubClassOf 'Drug discovery' 'Drugs and target structures' SubClassOf 'Small molecules' 'Drugs and target structures' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0624 Chromosomes 'Chromosomes' SubClassOf 'DNA' 'Chromosomes' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0623 Gene families 'Gene families' SubClassOf 'Genetics' 'Gene families' SubClassOf 'Molecular genetics' http://edamontology.org/topic_0639 Protein sequence analysis 'Protein sequence analysis' SubClassOf 'Obsolete concept (EDAM)' 'Protein sequence analysis' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0635 Specific protein resources 'Specific protein resources' SubClassOf 'Obsolete concept (EDAM)' 'Specific protein resources' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0602 Molecular interactions, pathways and networks 'Molecular interactions, pathways and networks' SubClassOf 'Biology' 'Molecular interactions, pathways and networks' SubClassOf 'Computational biology' http://edamontology.org/topic_0608 Cell and tissue culture 'Cell and tissue culture' SubClassOf 'Obsolete concept (EDAM)' 'Cell and tissue culture' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0606 Literature data resources 'Literature data resources' SubClassOf 'Obsolete concept (EDAM)' 'Literature data resources' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0612 Cell cycle 'Cell cycle' SubClassOf 'Obsolete concept (EDAM)' 'Cell cycle' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0613 Peptides and amino acids 'Peptides and amino acids' SubClassOf 'Small molecules' 'Peptides and amino acids' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0616 Organelles 'Organelles' SubClassOf 'Obsolete concept (EDAM)' 'Organelles' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0617 Ribosomes 'Ribosomes' SubClassOf 'Obsolete concept (EDAM)' 'Ribosomes' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0618 Scents 'Scents' SubClassOf 'Obsolete concept (EDAM)' 'Scents' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2533 Nucleic acid features report (mutation) 'Nucleic acid features report (mutation)' SubClassOf 'Obsolete concept (EDAM)' 'Nucleic acid features report (mutation)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2539 Alignment data 'Alignment data' SubClassOf 'Obsolete concept (EDAM)' 'Alignment data' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2540 Data index data 'Data index data' SubClassOf 'Obsolete concept (EDAM)' 'Data index data' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2579 Expressed gene list 'Expressed gene list' SubClassOf 'Obsolete concept (EDAM)' 'Expressed gene list' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2581 GO concept name 'GO concept name' SubClassOf 'Obsolete concept (EDAM)' 'GO concept name' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0697 RNA structure 'RNA structure' SubClassOf 'Obsolete concept (EDAM)' 'RNA structure' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0698 Protein tertiary structure 'Protein tertiary structure' SubClassOf 'Obsolete concept (EDAM)' 'Protein tertiary structure' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2584 GO concept name (cellular component) 'GO concept name (cellular component)' SubClassOf 'Obsolete concept (EDAM)' 'GO concept name (cellular component)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0694 Protein secondary structure 'Protein secondary structure' SubClassOf 'Obsolete concept (EDAM)' 'Protein secondary structure' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2590 Hierarchy identifier 'Hierarchy identifier' SubClassOf 'Obsolete concept (EDAM)' 'Hierarchy identifier' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0663 tRNA 'tRNA' SubClassOf 'Obsolete concept (EDAM)' 'tRNA' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2592 Cancer type 'Cancer type' SubClassOf 'Obsolete concept (EDAM)' 'Cancer type' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2598 Secondary structure alignment metadata 'Secondary structure alignment metadata' SubClassOf 'Obsolete concept (EDAM)' 'Secondary structure alignment metadata' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2599 Molecule interaction report 'Molecule interaction report' SubClassOf 'Obsolete concept (EDAM)' 'Molecule interaction report' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0660 rRNA 'rRNA' SubClassOf 'Obsolete concept (EDAM)' 'rRNA' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2602 Genotype and phenotype data 'Genotype and phenotype data' SubClassOf 'Obsolete concept (EDAM)' 'Genotype and phenotype data' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2601 Small molecule data 'Small molecule data' SubClassOf 'Obsolete concept (EDAM)' 'Small molecule data' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1601 Nc statistic 'Nc statistic' SubClassOf 'Obsolete concept (EDAM)' 'Nc statistic' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1634 Linkage disequilibrium (report) 'Linkage disequilibrium (report)' SubClassOf 'Obsolete concept (EDAM)' 'Linkage disequilibrium (report)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1656 Metabolic pathway report 'Metabolic pathway report' SubClassOf 'Obsolete concept (EDAM)' 'Metabolic pathway report' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1657 Genetic information processing pathway report 'Genetic information processing pathway report' SubClassOf 'Obsolete concept (EDAM)' 'Genetic information processing pathway report' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_3118 Protein topological domains 'Protein topological domains' SubClassOf 'Protein domains and folds' 'Protein topological domains' SubClassOf 'Protein domains' 'Protein topological domains' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1658 Environmental information processing pathway report 'Environmental information processing pathway report' SubClassOf 'Obsolete concept (EDAM)' 'Environmental information processing pathway report' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1659 Signal transduction pathway report 'Signal transduction pathway report' SubClassOf 'Obsolete concept (EDAM)' 'Signal transduction pathway report' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_3120 Protein variants 'Protein variants' SubClassOf 'Protein structure analysis' 'Protein variants' SubClassOf 'Protein expression' http://edamontology.org/topic_3123 Expression signals 'Expression signals' SubClassOf 'Obsolete concept (EDAM)' 'Expression signals' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1642 Affymetrix probe sets library file 'Affymetrix probe sets library file' SubClassOf 'Obsolete concept (EDAM)' 'Affymetrix probe sets library file' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1643 Affymetrix probe sets information library file 'Affymetrix probe sets information library file' SubClassOf 'Obsolete concept (EDAM)' 'Affymetrix probe sets information library file' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1646 Molecular weights standard fingerprint 'Molecular weights standard fingerprint' SubClassOf 'Obsolete concept (EDAM)' 'Molecular weights standard fingerprint' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_3127 DNA replication and recombination 'DNA replication and recombination' SubClassOf 'DNA binding sites' 'DNA replication and recombination' SubClassOf 'DNA' http://edamontology.org/topic_3126 Nucleic acid repeats 'Nucleic acid repeats' SubClassOf 'Nucleic acid sites, features and motifs' 'Nucleic acid repeats' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2627 Molecular interaction ID 'Molecular interaction ID' SubClassOf 'Obsolete concept (EDAM)' 'Molecular interaction ID' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1673 Swiss-Prot to PDB mapping 'Swiss-Prot to PDB mapping' SubClassOf 'Obsolete concept (EDAM)' 'Swiss-Prot to PDB mapping' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1674 Sequence database cross-references 'Sequence database cross-references' SubClassOf 'Obsolete concept (EDAM)' 'Sequence database cross-references' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1675 Job status 'Job status' SubClassOf 'Obsolete concept (EDAM)' 'Job status' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1676 Job ID 'Job ID' SubClassOf 'Obsolete concept (EDAM)' 'Job ID' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1670 Database version information 'Database version information' SubClassOf 'Obsolete concept (EDAM)' 'Database version information' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1671 Tool version information 'Tool version information' SubClassOf 'Obsolete concept (EDAM)' 'Tool version information' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1672 CATH version information 'CATH version information' SubClassOf 'Obsolete concept (EDAM)' 'CATH version information' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1677 Job type 'Job type' SubClassOf 'Obsolete concept (EDAM)' 'Job type' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1678 Tool log 'Tool log' SubClassOf 'Obsolete concept (EDAM)' 'Tool log' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1679 DaliLite log file 'DaliLite log file' SubClassOf 'Obsolete concept (EDAM)' 'DaliLite log file' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1664 MIRIAM datatype 'MIRIAM datatype' SubClassOf 'Obsolete concept (EDAM)' 'MIRIAM datatype' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1663 Protein interaction networks 'Protein interaction networks' SubClassOf 'Obsolete concept (EDAM)' 'Protein interaction networks' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1660 Cellular process pathways report 'Cellular process pathways report' SubClassOf 'Obsolete concept (EDAM)' 'Cellular process pathways report' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1661 Disease pathway or network report 'Disease pathway or network report' SubClassOf 'Obsolete concept (EDAM)' 'Disease pathway or network report' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_3139 Sequence tagged sites 'Sequence tagged sites' SubClassOf 'Nucleic acid sites, features and motifs' 'Sequence tagged sites' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_2953 Nucleic acid design 'Nucleic acid design' SubClassOf 'Obsolete concept (EDAM)' 'Nucleic acid design' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_0581 Database 'Database' SubClassOf 'Obsolete concept (EDAM)' 'Database' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_0583 Directory metadata 'Directory metadata' SubClassOf 'Obsolete concept (EDAM)' 'Directory metadata' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_3135 Signal or transit peptide 'Signal or transit peptide' SubClassOf 'Gene transcript features' 'Signal or transit peptide' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_3231 GWAS report 'GWAS report' SubClassOf 'Obsolete concept (EDAM)' 'GWAS report' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_3268 Sequence feature type 'Sequence feature type' SubClassOf 'Obsolete concept (EDAM)' 'Sequence feature type' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_3179 ChIP-on-chip 'ChIP-on-chip' SubClassOf 'Obsolete concept (EDAM)' http://edamontology.org/data_3269 Gene homology (report) 'Gene homology (report)' SubClassOf 'Obsolete concept (EDAM)' 'Gene homology (report)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_3177 DNA-Seq 'DNA-Seq' SubClassOf 'Obsolete concept (EDAM)' 'DNA-Seq' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_3178 RNA-Seq alignment 'RNA-Seq alignment' SubClassOf 'Obsolete concept (EDAM)' 'RNA-Seq alignment' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_3175 DNA structural variation 'DNA structural variation' SubClassOf 'Chromosomes' 'DNA structural variation' SubClassOf 'DNA' http://edamontology.org/topic_3171 DNA methylation 'DNA methylation' SubClassOf 'Obsolete concept (EDAM)' 'DNA methylation' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0741 Protein sequence alignment 'Protein sequence alignment' SubClassOf 'Obsolete concept (EDAM)' 'Protein sequence alignment' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0740 Nucleic acid sequence alignment 'Nucleic acid sequence alignment' SubClassOf 'Obsolete concept (EDAM)' 'Nucleic acid sequence alignment' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0280 Data retrieval (restriction enzyme annotation) 'Data retrieval (restriction enzyme annotation)' SubClassOf 'Obsolete concept (EDAM)' 'Data retrieval (restriction enzyme annotation)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0281 Genetic marker identification 'Genetic marker identification' SubClassOf 'Obsolete concept (EDAM)' 'Genetic marker identification' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0749 Transcription factors and regulatory sites 'Transcription factors and regulatory sites' SubClassOf 'Gene transcription features' 'Transcription factors and regulatory sites' SubClassOf 'Gene expression' http://edamontology.org/topic_0748 Protein sites and features 'Protein sites and features' SubClassOf 'Obsolete concept (EDAM)' 'Protein sites and features' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0747 Nucleic acid sites and features 'Nucleic acid sites and features' SubClassOf 'Obsolete concept (EDAM)' 'Nucleic acid sites and features' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_2034 Biological model format 'Biological model format' SubClassOf 'Obsolete concept (EDAM)' 'Biological model format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0751 Phosphorylation sites 'Phosphorylation sites' SubClassOf 'Obsolete concept (EDAM)' 'Phosphorylation sites' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0753 Metabolic pathways 'Metabolic pathways' SubClassOf 'Molecular interactions, pathways and networks' 'Metabolic pathways' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0293 Hybrid sequence alignment construction 'Hybrid sequence alignment construction' SubClassOf 'Obsolete concept (EDAM)' 'Hybrid sequence alignment construction' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0754 Signaling pathways 'Signaling pathways' SubClassOf 'Molecular interactions, pathways and networks' 'Signaling pathways' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_2045 Electron microscopy model format 'Electron microscopy model format' SubClassOf 'Obsolete concept (EDAM)' 'Electron microscopy model format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0767 Protein and peptide identification 'Protein and peptide identification' SubClassOf 'Obsolete concept (EDAM)' 'Protein and peptide identification' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_2051 Polymorphism report format 'Polymorphism report format' SubClassOf 'Obsolete concept (EDAM)' 'Polymorphism report format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_2059 Genotype and phenotype annotation format 'Genotype and phenotype annotation format' SubClassOf 'Obsolete concept (EDAM)' 'Genotype and phenotype annotation format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0770 Data types and objects 'Data types and objects' SubClassOf 'Obsolete concept (EDAM)' 'Data types and objects' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0771 Theoretical biology 'Theoretical biology' SubClassOf 'Obsolete concept (EDAM)' 'Theoretical biology' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0779 Mitochondria 'Mitochondria' SubClassOf 'Obsolete concept (EDAM)' 'Mitochondria' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_2063 Protein report (enzyme) format 'Protein report (enzyme) format' SubClassOf 'Obsolete concept (EDAM)' 'Protein report (enzyme) format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0722 Nucleic acid classification 'Nucleic acid classification' SubClassOf 'Obsolete concept (EDAM)' 'Nucleic acid classification' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1688 EMBOSS vectorstrip log file 'EMBOSS vectorstrip log file' SubClassOf 'Obsolete concept (EDAM)' 'EMBOSS vectorstrip log file' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1685 EMBOSS supermatcher error file 'EMBOSS supermatcher error file' SubClassOf 'Obsolete concept (EDAM)' 'EMBOSS supermatcher error file' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2512 Sequence editing (protein) 'Sequence editing (protein)' SubClassOf 'Obsolete concept (EDAM)' 'Sequence editing (protein)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1684 EMBOSS sites log file 'EMBOSS sites log file' SubClassOf 'Obsolete concept (EDAM)' 'EMBOSS sites log file' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1687 EMBOSS whichdb log file 'EMBOSS whichdb log file' SubClassOf 'Obsolete concept (EDAM)' 'EMBOSS whichdb log file' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1686 EMBOSS megamerger log file 'EMBOSS megamerger log file' SubClassOf 'Obsolete concept (EDAM)' 'EMBOSS megamerger log file' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2511 Sequence editing (nucleic acid) 'Sequence editing (nucleic acid)' SubClassOf 'Obsolete concept (EDAM)' 'Sequence editing (nucleic acid)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1681 NACCESS log file 'NACCESS log file' SubClassOf 'Obsolete concept (EDAM)' 'NACCESS log file' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2516 Protein sequence visualisation 'Protein sequence visualisation' SubClassOf 'Obsolete concept (EDAM)' 'Protein sequence visualisation' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1680 STRIDE log file 'STRIDE log file' SubClassOf 'Obsolete concept (EDAM)' 'STRIDE log file' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1683 EMBOSS domainatrix log file 'EMBOSS domainatrix log file' SubClassOf 'Obsolete concept (EDAM)' 'EMBOSS domainatrix log file' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1682 EMBOSS wordfinder log file 'EMBOSS wordfinder log file' SubClassOf 'Obsolete concept (EDAM)' 'EMBOSS wordfinder log file' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2515 Nucleic acid sequence visualisation 'Nucleic acid sequence visualisation' SubClassOf 'Obsolete concept (EDAM)' 'Nucleic acid sequence visualisation' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2679 Ensembl ID ('Echinops telfairi') 'Ensembl ID ('Echinops telfairi')' SubClassOf 'Obsolete concept (EDAM)' 'Ensembl ID ('Echinops telfairi')' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2678 Ensembl ID ('Dasypus novemcinctus') 'Ensembl ID ('Dasypus novemcinctus')' SubClassOf 'Obsolete concept (EDAM)' 'Ensembl ID ('Dasypus novemcinctus')' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2675 Ensembl ID ('Ciona intestinalis') 'Ensembl ID ('Ciona intestinalis')' SubClassOf 'Obsolete concept (EDAM)' 'Ensembl ID ('Ciona intestinalis')' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2674 Ensembl ID ('Cavia porcellus') 'Ensembl ID ('Cavia porcellus')' SubClassOf 'Obsolete concept (EDAM)' 'Ensembl ID ('Cavia porcellus')' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2677 Ensembl ID ('Danio rerio') 'Ensembl ID ('Danio rerio')' SubClassOf 'Obsolete concept (EDAM)' 'Ensembl ID ('Danio rerio')' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2676 Ensembl ID ('Ciona savignyi') 'Ensembl ID ('Ciona savignyi')' SubClassOf 'Obsolete concept (EDAM)' 'Ensembl ID ('Ciona savignyi')' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2671 Ensembl ID (Homo sapiens) 'Ensembl ID (Homo sapiens)' SubClassOf 'Obsolete concept (EDAM)' 'Ensembl ID (Homo sapiens)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2673 Ensembl ID ('Canis familiaris') 'Ensembl ID ('Canis familiaris')' SubClassOf 'Obsolete concept (EDAM)' 'Ensembl ID ('Canis familiaris')' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2672 Ensembl ID ('Bos taurus') 'Ensembl ID ('Bos taurus')' SubClassOf 'Obsolete concept (EDAM)' 'Ensembl ID ('Bos taurus')' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2680 Ensembl ID ('Erinaceus europaeus') 'Ensembl ID ('Erinaceus europaeus')' SubClassOf 'Obsolete concept (EDAM)' 'Ensembl ID ('Erinaceus europaeus')' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2500 Microarray raw data analysis 'Microarray raw data analysis' SubClassOf 'Obsolete concept (EDAM)' 'Microarray raw data analysis' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1695 Hit sort order 'Hit sort order' SubClassOf 'Obsolete concept (EDAM)' 'Hit sort order' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1694 Number of output entities 'Number of output entities' SubClassOf 'Obsolete concept (EDAM)' 'Number of output entities' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2503 Sequence data processing 'Sequence data processing' SubClassOf 'Obsolete concept (EDAM)' 'Sequence data processing' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_1693 Number of iterations 'Number of iterations' SubClassOf 'Obsolete concept (EDAM)' 'Number of iterations' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2504 Structural data processing 'Structural data processing' SubClassOf 'Obsolete concept (EDAM)' 'Structural data processing' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2505 Text processing 'Text processing' SubClassOf 'Obsolete concept (EDAM)' 'Text processing' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2689 Ensembl ID ('Myotis lucifugus') 'Ensembl ID ('Myotis lucifugus')' SubClassOf 'Obsolete concept (EDAM)' 'Ensembl ID ('Myotis lucifugus')' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2688 Ensembl ID ('Mus musculus') 'Ensembl ID ('Mus musculus')' SubClassOf 'Obsolete concept (EDAM)' 'Ensembl ID ('Mus musculus')' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2687 Ensembl ID ('Monodelphis domestica') 'Ensembl ID ('Monodelphis domestica')' SubClassOf 'Obsolete concept (EDAM)' 'Ensembl ID ('Monodelphis domestica')' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2686 Ensembl ID ('Macaca mulatta') 'Ensembl ID ('Macaca mulatta')' SubClassOf 'Obsolete concept (EDAM)' 'Ensembl ID ('Macaca mulatta')' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2685 Ensembl ID ('Loxodonta africana') 'Ensembl ID ('Loxodonta africana')' SubClassOf 'Obsolete concept (EDAM)' 'Ensembl ID ('Loxodonta africana')' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2684 Ensembl ID ('Homo sapiens') 'Ensembl ID ('Homo sapiens')' SubClassOf 'Obsolete concept (EDAM)' 'Ensembl ID ('Homo sapiens')' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2683 Ensembl ID ('Gasterosteus aculeatus') 'Ensembl ID ('Gasterosteus aculeatus')' SubClassOf 'Obsolete concept (EDAM)' 'Ensembl ID ('Gasterosteus aculeatus')' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2682 Ensembl ID ('Gallus gallus') 'Ensembl ID ('Gallus gallus')' SubClassOf 'Obsolete concept (EDAM)' 'Ensembl ID ('Gallus gallus')' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2681 Ensembl ID ('Felis catus') 'Ensembl ID ('Felis catus')' SubClassOf 'Obsolete concept (EDAM)' 'Ensembl ID ('Felis catus')' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0225 Data retrieval (database cross-reference) 'Data retrieval (database cross-reference)' SubClassOf 'Obsolete concept (EDAM)' 'Data retrieval (database cross-reference)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0228 Data index analysis 'Data index analysis' SubClassOf 'Obsolete concept (EDAM)' 'Data index analysis' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0229 Annotation retrieval (sequence) 'Annotation retrieval (sequence)' SubClassOf 'Obsolete concept (EDAM)' 'Annotation retrieval (sequence)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2521 Map data processing 'Map data processing' SubClassOf 'Obsolete concept (EDAM)' 'Map data processing' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0238 Sequence motif discovery 'Sequence motif discovery' SubClassOf 'Sequence motif processing' http://edamontology.org/operation_0239 Sequence motif recognition 'Sequence motif recognition' SubClassOf 'Sequence motif processing' http://edamontology.org/operation_2519 Structure processing (nucleic acid) 'Structure processing (nucleic acid)' SubClassOf 'Obsolete concept (EDAM)' 'Structure processing (nucleic acid)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0241 Transcription regulatory sequence analysis 'Transcription regulatory sequence analysis' SubClassOf 'Obsolete concept (EDAM)' 'Transcription regulatory sequence analysis' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0240 Sequence motif comparison 'Sequence motif comparison' SubClassOf 'Sequence motif processing' http://edamontology.org/topic_0786 Arabidopsis 'Arabidopsis' SubClassOf 'Obsolete concept (EDAM)' 'Arabidopsis' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0787 Rice 'Rice' SubClassOf 'Obsolete concept (EDAM)' 'Rice' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0255 Feature table query 'Feature table query' SubClassOf 'Obsolete concept (EDAM)' 'Feature table query' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0257 Data retrieval (sequence alignment) 'Data retrieval (sequence alignment)' SubClassOf 'Obsolete concept (EDAM)' 'Data retrieval (sequence alignment)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0796 Genetic mapping and linkage 'Genetic mapping and linkage' SubClassOf 'Obsolete concept (EDAM)' 'Genetic mapping and linkage' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0254 Data retrieval (feature table) 'Data retrieval (feature table)' SubClassOf 'Obsolete concept (EDAM)' 'Data retrieval (feature table)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_0798 Mobile genetic elements 'Mobile genetic elements' SubClassOf 'Nucleic acid sites, features and motifs' 'Mobile genetic elements' SubClassOf 'Genetics' 'Mobile genetic elements' SubClassOf 'Gene structure' http://edamontology.org/operation_0261 Nucleic acid property processing 'Nucleic acid property processing' SubClassOf 'Obsolete concept (EDAM)' 'Nucleic acid property processing' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2691 Ensembl ID ('Oryctolagus cuniculus') 'Ensembl ID ('Oryctolagus cuniculus')' SubClassOf 'Obsolete concept (EDAM)' 'Ensembl ID ('Oryctolagus cuniculus')' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2690 Ensembl ID ("Ornithorhynchus anatinus") 'Ensembl ID ("Ornithorhynchus anatinus")' SubClassOf 'Obsolete concept (EDAM)' 'Ensembl ID ("Ornithorhynchus anatinus")' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2692 Ensembl ID ('Oryzias latipes') 'Ensembl ID ('Oryzias latipes')' SubClassOf 'Obsolete concept (EDAM)' 'Ensembl ID ('Oryzias latipes')' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2693 Ensembl ID ('Otolemur garnettii') 'Ensembl ID ('Otolemur garnettii')' SubClassOf 'Obsolete concept (EDAM)' 'Ensembl ID ('Otolemur garnettii')' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2694 Ensembl ID ('Pan troglodytes') 'Ensembl ID ('Pan troglodytes')' SubClassOf 'Obsolete concept (EDAM)' 'Ensembl ID ('Pan troglodytes')' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2695 Ensembl ID ('Rattus norvegicus') 'Ensembl ID ('Rattus norvegicus')' SubClassOf 'Obsolete concept (EDAM)' 'Ensembl ID ('Rattus norvegicus')' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2696 Ensembl ID ('Spermophilus tridecemlineatus') 'Ensembl ID ('Spermophilus tridecemlineatus')' SubClassOf 'Obsolete concept (EDAM)' 'Ensembl ID ('Spermophilus tridecemlineatus')' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2697 Ensembl ID ('Takifugu rubripes') 'Ensembl ID ('Takifugu rubripes')' SubClassOf 'Obsolete concept (EDAM)' 'Ensembl ID ('Takifugu rubripes')' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2698 Ensembl ID ('Tupaia belangeri') 'Ensembl ID ('Tupaia belangeri')' SubClassOf 'Obsolete concept (EDAM)' 'Ensembl ID ('Tupaia belangeri')' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2699 Ensembl ID ('Xenopus tropicalis') 'Ensembl ID ('Xenopus tropicalis')' SubClassOf 'Obsolete concept (EDAM)' 'Ensembl ID ('Xenopus tropicalis')' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0274 Protein-protein interaction prediction (from protein sequence) 'Protein-protein interaction prediction (from protein sequence)' SubClassOf 'Obsolete concept (EDAM)' 'Protein-protein interaction prediction (from protein sequence)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0275 Protein-protein interaction prediction (from protein structure) 'Protein-protein interaction prediction (from protein structure)' SubClassOf 'Obsolete concept (EDAM)' 'Protein-protein interaction prediction (from protein structure)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_2015 Sequence-profile alignment (HMM) format 'Sequence-profile alignment (HMM) format' SubClassOf 'Obsolete concept (EDAM)' 'Sequence-profile alignment (HMM) format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/topic_3697 Microbial ecology 'Microbial ecology' SubClassOf 'Ecology' 'Microbial ecology' SubClassOf 'Microbiology' http://edamontology.org/format_3688 SBtab 'SBtab' SubClassOf 'Textual format' 'SBtab' SubClassOf 'Biological pathway or network format' http://edamontology.org/format_3687 ISA-TAB 'ISA-TAB' SubClassOf 'Experiment annotation format' 'ISA-TAB' SubClassOf 'Textual format' 'ISA-TAB' SubClassOf 'Gene expression report format' http://edamontology.org/format_3689 BCML 'BCML' SubClassOf 'Biological pathway or network format' 'BCML' SubClassOf 'XML' http://edamontology.org/format_3684 PRIDE XML 'PRIDE XML' SubClassOf 'Experiment annotation format' 'PRIDE XML' SubClassOf 'Mass spectrometry data format' 'PRIDE XML' SubClassOf 'XML' http://edamontology.org/format_3683 qcML 'qcML' SubClassOf 'Mass spectrometry data format' 'qcML' SubClassOf 'Experiment annotation format' 'qcML' SubClassOf 'XML' http://edamontology.org/format_3686 COMBINE OMEX 'COMBINE OMEX' SubClassOf 'Biological pathway or network format' 'COMBINE OMEX' SubClassOf 'Binary format' 'COMBINE OMEX' SubClassOf 'Experiment annotation format' http://edamontology.org/format_3685 SED-ML 'SED-ML' SubClassOf 'XML' 'SED-ML' SubClassOf 'Experiment annotation format' http://edamontology.org/format_3682 imzML 'imzML' SubClassOf 'Mass spectrometry data format' 'imzML' SubClassOf 'Binary format' 'imzML' SubClassOf 'XML' http://edamontology.org/format_3681 mzTab 'mzTab' SubClassOf 'Mass spectrometry data format' 'mzTab' SubClassOf 'Textual format' http://edamontology.org/format_3699 VDB 'VDB' SubClassOf 'Binary format' http://edamontology.org/format_3698 SRA format 'SRA format' SubClassOf 'Binary format' http://edamontology.org/format_3693 AGP 'AGP' SubClassOf 'Textual format' 'AGP' SubClassOf 'Sequence assembly format' http://edamontology.org/format_3692 SBGN-ML 'SBGN-ML' SubClassOf 'XML' 'SBGN-ML' SubClassOf 'Biological pathway or network format' http://edamontology.org/format_3691 BEL 'BEL' SubClassOf 'Textual format' http://edamontology.org/format_3690 BDML 'BDML' SubClassOf 'XML' http://edamontology.org/format_3696 PS 'PS' SubClassOf 'Textual format' http://edamontology.org/format_3700 Tabix index file format 'Tabix index file format' SubClassOf 'Data index format' 'Tabix index file format' SubClassOf 'is format of' some 'Data index' http://edamontology.org/format_3701 sequin 'sequin' SubClassOf 'Sequence feature table format (text)' http://edamontology.org/operation_3680 RNA-Seq analysis 'RNA-Seq analysis' SubClassOf 'Nucleic acid sequence analysis' http://edamontology.org/operation_3694 Mass spectrum visualisation 'Mass spectrum visualisation' SubClassOf 'Visualisation' http://edamontology.org/operation_3695 Filtering 'Filtering' SubClassOf 'File handling'