53 0 0 http://edamontology.org/operation_0334 Enzyme kinetics calculation 'Enzyme kinetics calculation' SubClassOf 'Protein property calculation (from sequence)' 'Enzyme kinetics calculation' SubClassOf 'Protein property calculation' http://edamontology.org/operation_0333 Zinc finger prediction 'Zinc finger prediction' SubClassOf 'has topic' some 'Protein folding, stability and design' 'Zinc finger prediction' SubClassOf 'has output' some 'Protein interaction report' 'Zinc finger prediction' SubClassOf 'Protein-nucleic acid binding prediction' 'Zinc finger prediction' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0386 Protein dipole moment calculation 'Protein dipole moment calculation' SubClassOf 'Protein property calculation (from sequence)' 'Protein dipole moment calculation' SubClassOf 'Protein property calculation' http://edamontology.org/operation_0398 Protein molecular weight calculation 'Protein molecular weight calculation' SubClassOf 'Protein property calculation (from sequence)' 'Protein molecular weight calculation' SubClassOf 'Protein property calculation' http://edamontology.org/operation_0399 Protein extinction coefficient calculation 'Protein extinction coefficient calculation' SubClassOf 'Protein property calculation (from sequence)' 'Protein extinction coefficient calculation' SubClassOf 'Protein property calculation' http://edamontology.org/operation_0366 Protein sequence cleavage 'Protein sequence cleavage' SubClassOf 'Protein property calculation (from sequence)' 'Protein sequence cleavage' SubClassOf 'Protein property calculation' http://edamontology.org/operation_3441 Plotting 'Plotting' SubClassOf 'Operation' 'Plotting' SubClassOf 'Visualisation' http://edamontology.org/operation_3471 Nucleic acid folding prediction (alignment-based) 'Nucleic acid folding prediction (alignment-based)' SubClassOf 'Nucleic acid folding analysis' 'Nucleic acid folding prediction (alignment-based)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_3470 RNA secondary structure prediction (shape-based) 'RNA secondary structure prediction (shape-based)' SubClassOf 'RNA secondary structure prediction' 'RNA secondary structure prediction (shape-based)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2931 Secondary structure comparison 'Secondary structure comparison' SubClassOf 'Comparison' 'Secondary structure comparison' SubClassOf 'has topic' some 'Structure analysis' 'Secondary structure comparison' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2935 Microarray wave graph plotting 'Microarray wave graph plotting' SubClassOf 'Microarray data rendering' 'Microarray wave graph plotting' SubClassOf 'Plotting' http://edamontology.org/operation_2934 Microarray cluster textual view generation 'Microarray cluster textual view generation' SubClassOf 'Microarray data rendering' 'Microarray cluster textual view generation' SubClassOf 'Plotting' http://edamontology.org/operation_2941 Whole microarray graph plotting 'Whole microarray graph plotting' SubClassOf 'Microarray data rendering' 'Whole microarray graph plotting' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2940 Microarray scatter plot plotting 'Microarray scatter plot plotting' SubClassOf 'Microarray data rendering' 'Microarray scatter plot plotting' SubClassOf 'Plotting' http://edamontology.org/operation_2943 Microarray Box-Whisker plot plotting 'Microarray Box-Whisker plot plotting' SubClassOf 'Microarray data rendering' 'Microarray Box-Whisker plot plotting' SubClassOf 'Plotting' http://edamontology.org/operation_2939 Microarray principal component plotting 'Microarray principal component plotting' SubClassOf 'Microarray data rendering' 'Microarray principal component plotting' SubClassOf 'Plotting' http://edamontology.org/operation_0467 Protein secondary structure prediction (integrated) 'Protein secondary structure prediction (integrated)' SubClassOf 'Protein secondary structure prediction' 'Protein secondary structure prediction (integrated)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0471 Protein secondary structure prediction (disulfide bonds) 'Protein secondary structure prediction (disulfide bonds)' SubClassOf 'Protein secondary structure prediction' 'Protein secondary structure prediction (disulfide bonds)' SubClassOf 'Protein feature detection' http://edamontology.org/operation_0451 Recombination detection 'Recombination detection' SubClassOf 'Nucleic acid sequence alignment analysis' 'Recombination detection' SubClassOf 'Nucleic acid sequence analysis' http://edamontology.org/operation_0452 Indel detection 'Indel detection' SubClassOf 'Nucleic acid sequence alignment analysis' 'Indel detection' SubClassOf 'Nucleic acid sequence analysis' http://edamontology.org/operation_0450 Chimeric sequence detection 'Chimeric sequence detection' SubClassOf 'Nucleic acid sequence alignment analysis' 'Chimeric sequence detection' SubClassOf 'Nucleic acid sequence analysis' http://edamontology.org/operation_0484 SNP detection 'SNP detection' SubClassOf 'Nucleic acid sequence alignment analysis' 'SNP detection' SubClassOf 'Nucleic acid sequence analysis' http://edamontology.org/operation_2239 3D-1D scoring matrix generation '3D-1D scoring matrix generation' SubClassOf 'Protein property calculation (from sequence)' '3D-1D scoring matrix generation' SubClassOf 'Protein property calculation (from structure)' '3D-1D scoring matrix generation' SubClassOf 'Protein property calculation' http://edamontology.org/operation_0400 Protein pH-dependent property calculation 'Protein pH-dependent property calculation' SubClassOf 'Protein property calculation (from sequence)' 'Protein pH-dependent property calculation' SubClassOf 'Protein property calculation' http://edamontology.org/operation_3209 Genome comparison 'Genome comparison' SubClassOf 'Nucleic acid sequence comparison' 'Genome comparison' SubClassOf 'Sequence comparison' http://edamontology.org/operation_3197 Genetic variation analysis 'Genetic variation analysis' SubClassOf 'Nucleic acid sequence comparison' http://edamontology.org/operation_3195 Sequencing error detection 'Sequencing error detection' SubClassOf 'Nucleic acid sequence comparison' 'Sequencing error detection' SubClassOf 'Sequence comparison' http://edamontology.org/operation_0224 Query and retrieval 'Query and retrieval' SubClassOf 'Operation' 'Query and retrieval' SubClassOf 'Data handling' http://edamontology.org/operation_0266 Vector sequence detection 'Vector sequence detection' SubClassOf 'Nucleic acid sequence comparison' 'Vector sequence detection' SubClassOf 'Sequence comparison' http://edamontology.org/operation_0272 Residue interaction prediction 'Residue interaction prediction' SubClassOf 'Protein sequence alignment analysis' 'Residue interaction prediction' SubClassOf 'Protein property calculation (from structure)' 'Residue interaction prediction' SubClassOf 'Protein sequence analysis' 'Residue interaction prediction' SubClassOf 'Protein property calculation' http://edamontology.org/operation_0244 Protein flexibility and motion analysis 'Protein flexibility and motion analysis' SubClassOf 'Protein property calculation (from structure)' 'Protein flexibility and motion analysis' SubClassOf 'Protein property calculation' http://edamontology.org/operation_0248 Residue interaction calculation 'Residue interaction calculation' SubClassOf 'Protein property calculation (from structure)' 'Residue interaction calculation' SubClassOf 'Protein property calculation' http://edamontology.org/operation_0249 Protein geometry calculation 'Protein geometry calculation' SubClassOf 'Protein property calculation (from structure)' 'Protein geometry calculation' SubClassOf 'Protein property calculation' http://edamontology.org/operation_0243 Protein property calculation (from structure) 'Protein property calculation (from structure)' SubClassOf 'Protein structure analysis' 'Protein property calculation (from structure)' SubClassOf 'has topic' some 'Protein structure analysis' 'Protein property calculation (from structure)' SubClassOf 'has output' some 'Protein property' 'Protein property calculation (from structure)' SubClassOf 'Protein property calculation' 'Protein property calculation (from structure)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0252 Peptide immunogenicity prediction 'Peptide immunogenicity prediction' SubClassOf 'Protein property calculation (from sequence)' 'Peptide immunogenicity prediction' SubClassOf 'Protein property calculation' http://edamontology.org/operation_0284 Codon usage table generation 'Codon usage table generation' SubClassOf 'Codon usage table processing' 'Codon usage table generation' SubClassOf 'Codon usage analysis' http://edamontology.org/operation_0285 Codon usage table comparison 'Codon usage table comparison' SubClassOf 'Codon usage table processing' 'Codon usage table comparison' SubClassOf 'Codon usage analysis' http://edamontology.org/operation_2506 Protein sequence alignment analysis 'Protein sequence alignment analysis' SubClassOf 'has input' some 'Sequence alignment (protein)' 'Protein sequence alignment analysis' SubClassOf 'Sequence alignment analysis' 'Protein sequence alignment analysis' SubClassOf 'Prediction and recognition (protein)' 'Protein sequence alignment analysis' SubClassOf 'Protein analysis' 'Protein sequence alignment analysis' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2509 Protein sequence comparison 'Protein sequence comparison' SubClassOf 'Sequence comparison' 'Protein sequence comparison' SubClassOf 'Protein comparison' 'Protein sequence comparison' SubClassOf 'Protein sequence analysis' 'Protein sequence comparison' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2508 Nucleic acid sequence comparison 'Nucleic acid sequence comparison' SubClassOf 'Nucleic acid comparison' 'Nucleic acid sequence comparison' SubClassOf 'Nucleic acid sequence analysis' 'Nucleic acid sequence comparison' SubClassOf 'Sequence comparison' 'Nucleic acid sequence comparison' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2507 Nucleic acid sequence alignment analysis 'Nucleic acid sequence alignment analysis' SubClassOf 'Prediction and recognition (nucleic acid)' 'Nucleic acid sequence alignment analysis' SubClassOf 'has input' some 'Sequence alignment (nucleic acid)' 'Nucleic acid sequence alignment analysis' SubClassOf 'Nucleic acid analysis' 'Nucleic acid sequence alignment analysis' SubClassOf 'Sequence alignment analysis' 'Nucleic acid sequence alignment analysis' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_3088 Protein property calculation (from sequence) 'Protein property calculation (from sequence)' SubClassOf 'Protein property calculation' 'Protein property calculation (from sequence)' SubClassOf 'Protein sequence analysis' 'Protein property calculation (from sequence)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0501 Protein secondary structure alignment generation 'Protein secondary structure alignment generation' SubClassOf 'Protein secondary structure comparison' 'Protein secondary structure alignment generation' SubClassOf 'has output' some 'Secondary structure alignment (protein)' 'Protein secondary structure alignment generation' SubClassOf 'Generation' 'Protein secondary structure alignment generation' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0550 DNA substitution modelling 'DNA substitution modelling' SubClassOf 'Nucleic acid sequence alignment analysis' 'DNA substitution modelling' SubClassOf 'Nucleic acid sequence analysis' http://edamontology.org/operation_1850 Protein cysteine and disulfide bond assignment 'Protein cysteine and disulfide bond assignment' SubClassOf 'Protein secondary structure assignment (from coordinate data)' 'Protein cysteine and disulfide bond assignment' SubClassOf 'Prediction and recognition (protein)' http://edamontology.org/operation_0534 Protein secondary structure assignment (from coordinate data) 'Protein secondary structure assignment (from coordinate data)' SubClassOf 'Protein secondary structure assignment' 'Protein secondary structure assignment (from coordinate data)' SubClassOf 'Protein structure analysis' 'Protein secondary structure assignment (from coordinate data)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0535 Protein secondary structure assignment (from CD data) 'Protein secondary structure assignment (from CD data)' SubClassOf 'Protein secondary structure assignment' 'Protein secondary structure assignment (from CD data)' SubClassOf 'has input' some 'Protein circular dichroism (CD) spectroscopic data' 'Protein secondary structure assignment (from CD data)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_3778 Text annotation 'Text annotation' SubClassOf 'Analysis' http://edamontology.org/operation_2457 GPCR coupling selectivity prediction 'GPCR coupling selectivity prediction' SubClassOf 'Protein property calculation (from sequence)' 'GPCR coupling selectivity prediction' SubClassOf 'Protein property calculation' http://edamontology.org/operation_2433 Codon usage table processing 'Codon usage table processing' SubClassOf 'Codon usage analysis' 'Codon usage table processing' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_2488 Protein secondary structure comparison 'Protein secondary structure comparison' SubClassOf 'Secondary structure comparison' http://edamontology.org/operation_2499 Splicing model analysis 'Splicing model analysis' SubClassOf 'Nucleic acid sequence comparison' 'Splicing model analysis' SubClassOf 'Sequence comparison' http://edamontology.org/operation_2474 Protein architecture comparison 'Protein architecture comparison' SubClassOf 'Protein secondary structure comparison' 'Protein architecture comparison' SubClassOf 'Protein comparison'