18 29 0 http://edamontology.org/operation_0328 Protein folding simulation 'Protein folding simulation' SubClassOf 'Protein folding analysis' 'Protein folding simulation' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2336 Translation phase specification 'Translation phase specification' SubClassOf 'Sequence attribute' 'Translation phase specification' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0421 Protein folding site prediction 'Protein folding site prediction' SubClassOf 'Protein folding analysis' 'Protein folding site prediction' SubClassOf 'Protein feature detection' 'Protein folding site prediction' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_1769 Nucleic acid folding energy calculation 'Nucleic acid folding energy calculation' SubClassOf 'Nucleic acid folding analysis' 'Nucleic acid folding energy calculation' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/data_2126 Translation frame specification 'Translation frame specification' SubClassOf 'Sequence attribute' 'Translation frame specification' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/operation_0279 Nucleic acid folding analysis 'Nucleic acid folding analysis' SubClassOf 'Prediction and recognition' 'Nucleic acid folding analysis' SubClassOf 'Nucleic acid structure prediction' http://edamontology.org/operation_0278 RNA secondary structure prediction 'RNA secondary structure prediction' SubClassOf 'Nucleic acid folding analysis' 'RNA secondary structure prediction' SubClassOf 'Nucleic acid structure prediction' http://edamontology.org/operation_0244 Protein flexibility and motion analysis 'Protein flexibility and motion analysis' SubClassOf 'Molecular dynamics simulation' http://edamontology.org/operation_0575 Restriction map drawing 'Restriction map drawing' SubClassOf 'Restriction site recognition' http://edamontology.org/format_3711 X!Tandem XML 'X!Tandem XML' SubClassOf 'Textual format' 'X!Tandem XML' SubClassOf 'Binary format' 'X!Tandem XML' SubClassOf 'XML' http://edamontology.org/format_3682 imzML 'imzML' SubClassOf 'Binary format' http://edamontology.org/format_2331 HTML 'HTML' DisjointWith 'Binary format' http://edamontology.org/format_2330 Textual format 'Textual format' DisjointWith 'Binary format' http://edamontology.org/format_2333 Binary format 'XML' DisjointWith 'Binary format' 'HTML' DisjointWith 'Binary format' 'Textual format' DisjointWith 'Binary format' http://edamontology.org/format_2332 XML 'XML' DisjointWith 'Binary format' http://edamontology.org/data_0853 DNA sense specification 'DNA sense specification' SubClassOf 'Sequence attribute' 'DNA sense specification' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_3624 snpeffdb 'snpeffdb' SubClassOf 'Index format' 'snpeffdb' SubClassOf 'Data index format' http://edamontology.org/format_3623 Index format 'Index format' SubClassOf 'Format (by type of data)' 'Index format' SubClassOf 'Binary format' 'Index format' SubClassOf 'is format of' some 'Data index' 'Index format' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass http://edamontology.org/format_3839 ibd 'ibd' SubClassOf 'Mass spectrometry data format' 'ibd' SubClassOf 'Binary format' http://edamontology.org/format_3838 pptx 'pptx' SubClassOf 'Image format' 'pptx' SubClassOf 'XML' http://edamontology.org/format_3835 TIDE TXT 'TIDE TXT' SubClassOf 'XML' 'TIDE TXT' SubClassOf 'Mass spectrometry data format' http://edamontology.org/format_3834 mzData 'mzData' SubClassOf 'Mass spectrometry data format' 'mzData' SubClassOf 'XML' http://edamontology.org/format_3836 BLAST XML v2 results format 'BLAST XML v2 results format' SubClassOf 'XML' 'BLAST XML v2 results format' SubClassOf 'BLAST results' http://edamontology.org/format_3830 ARB 'ARB' SubClassOf 'Alignment format' 'ARB' SubClassOf 'Binary format' http://edamontology.org/format_3833 featureXML 'featureXML' SubClassOf 'Mass spectrometry data format' 'featureXML' SubClassOf 'XML' http://edamontology.org/format_3832 consensusXML 'consensusXML' SubClassOf 'XML' 'consensusXML' SubClassOf 'Mass spectrometry data format' http://edamontology.org/format_3828 Raw microarray data format 'Raw microarray data format' SubClassOf 'is format of' some 'Raw microarray data' 'Raw microarray data format' SubClassOf 'Format (by type of data)' http://edamontology.org/format_3827 proBED 'proBED' SubClassOf 'Sequence annotation track format' 'proBED' SubClassOf 'Textual format' http://edamontology.org/format_3829 GPR 'GPR' SubClassOf 'Raw microarray data format' 'GPR' SubClassOf 'Textual format' http://edamontology.org/format_3824 Raw NMR data format 'Raw NMR data format' SubClassOf 'Format (by type of data)' 'Raw NMR data format' SubClassOf 'is format of' some 'NMR spectrum' http://edamontology.org/format_3823 FASTG 'FASTG' SubClassOf 'Textual format' 'FASTG' SubClassOf 'Sequence assembly format (text)' http://edamontology.org/format_3826 proBAM 'proBAM' SubClassOf 'Alignment format (pair only)' 'proBAM' SubClassOf 'Binary format' 'proBAM' SubClassOf 'Sequence trace format' http://edamontology.org/format_3825 nmrML 'nmrML' SubClassOf 'Raw NMR data format' 'nmrML' SubClassOf 'XML' http://edamontology.org/format_3820 Relaxed PHYLIP Sequential 'Relaxed PHYLIP Sequential' SubClassOf 'Phylip format variant' http://edamontology.org/format_3822 GML 'GML' SubClassOf 'Textual format' 'GML' SubClassOf 'Biological pathway or network format' http://edamontology.org/format_3821 VisML 'VisML' SubClassOf 'XML' 'VisML' SubClassOf 'Biological pathway or network format' http://edamontology.org/format_3817 latex 'latex' SubClassOf 'Textual format' 'latex' SubClassOf 'Document format' http://edamontology.org/format_3816 Mol2 'Mol2' SubClassOf 'Textual format' 'Mol2' SubClassOf 'Chemical data format' http://edamontology.org/format_3819 Relaxed PHYLIP Interleaved 'Relaxed PHYLIP Interleaved' SubClassOf 'Phylip format variant' http://edamontology.org/format_3818 ELAND format 'ELAND format' SubClassOf 'Textual format' 'ELAND format' SubClassOf 'Sequence assembly format (text)' http://edamontology.org/format_3813 SAMPLE file format 'SAMPLE file format' SubClassOf 'Textual format' http://edamontology.org/format_3812 GEN 'GEN' SubClassOf 'Sequence annotation track format' 'GEN' SubClassOf 'Textual format' http://edamontology.org/format_3815 Molfile 'Molfile' SubClassOf 'Textual format' 'Molfile' SubClassOf 'Chemical data format' http://edamontology.org/format_3814 SDF 'SDF' SubClassOf 'Textual format' 'SDF' SubClassOf 'Chemical data format' http://edamontology.org/format_3811 XMFA 'XMFA' SubClassOf 'Alignment format (text)' 'XMFA' SubClassOf 'FASTA-like (text)' http://edamontology.org/topic_3810 Agricultural science 'Agricultural science' SubClassOf 'Biology' http://edamontology.org/topic_3837 Metagenomic sequencing 'Metagenomic sequencing' SubClassOf 'Sequencing'