format-version: 1.2 date: 12:01:2012 11:28 saved-by: midori auto-generated-by: OBO-Edit 2.1 default-namespace: fission_yeast_phenotype remark: svn version: $Revision$ ontology: fypo [Term] id: FYPO:0000001 name: phenotype def: "Any of the set of observable characteristics of an organism resulting from the interaction of its genotype with the environment." [PomBase:mah] creation_date: 2011-03-16T03:59:25Z [Term] id: FYPO:0000002 name: cell phenotype def: "A phenotype that is observed at the level of an individual cell." [PomBase:mah] is_a: FYPO:0000001 ! phenotype intersection_of: FYPO:0000001 ! phenotype intersection_of: inheres_in CL:0000000 created_by: midori creation_date: 2011-03-16T04:25:28Z [Term] id: FYPO:0000003 name: cell population phenotype def: "A phenotype that is observed at the level of a population of cells." [PomBase:mah] comment: note: differentium is population level, and may reflect observation conditions is_a: FYPO:0000001 ! phenotype created_by: midori creation_date: 2011-03-16T04:26:35Z [Term] id: FYPO:0000004 name: viability def: "A cell phenotype that consists of the cell's disposition to survive and develop normally." [PomBase:mah] is_a: FYPO:0000002 ! cell phenotype intersection_of: PATO:0000169 intersection_of: inheres_in CL:0000000 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000005 name: abnormal cell morphology alt_id: FYPO:0000019 def: "A cell phenotype characterized by altered cell morphology." [PomBase:mah] synonym: "cell morphology, misshapen cells" EXACT [PomBase:mah] is_a: FYPO:0000136 ! cellular structure phenotype created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000006 name: abnormal DNA damage checkpoint def: "A cell cycle checkpoint phenotype that affects the DNA damage checkpoint." [PomBase:mah] synonym: "DNA damage checkpoint defects" EXACT [PomBase:mah] is_a: FYPO:0000157 ! abnormal response to DNA damage stimulus is_a: FYPO:0000643 ! abnormal DNA integrity checkpoint intersection_of: PATO:0000001 intersection_of: inheres_in GO:0000077 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000007 name: abnormal S-phase DNA damage checkpoint alt_id: FYPO:0000195 def: "A cell cycle checkpoint phenotype that affects the S phase DNA damage checkpoint (also known as the intra-S phase DNA damage checkpoint)." [PomBase:mah] synonym: "abnormal intra-S DNA damage checkpoint" EXACT [] synonym: "DNA damage checkpoint defects, S-phase" EXACT [PomBase:mah] is_a: FYPO:0000006 ! abnormal DNA damage checkpoint intersection_of: PATO:0000001 intersection_of: inheres_in GO:0031573 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000008 name: abnormal meiotic recombination def: "A cellular process phenotype in which reciprocal meiotic recombination is abnormal." [PomBase:mah] synonym: "abnormal meiotic DNA recombination" EXACT [PomBase:mah] synonym: "abnormal reciprocal meiotic recombination" EXACT [PomBase:mah] synonym: "DNA recombination defects, meiotic" EXACT [PomBase:mah] synonym: "meiotic recombination: abnormal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000063 ! abnormal DNA recombination intersection_of: PATO:0000001 intersection_of: inheres_in GO:0007131 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000009 name: abnormal cell adhesion def: "A cellular process phenotype in which adhesion of a cell to a substrate or another cell is abnormal." [PomBase:mah] synonym: "adhesion defects" EXACT [PomBase:mah] is_a: FYPO:0000628 ! abnormal cellular process intersection_of: PATO:0000001 intersection_of: inheres_in GO:0007155 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000010 name: cell-substrate adhesion abolished def: "A cell adhesion phenotype in which cells fail to adhere to a substrate." [PomBase:mah] is_a: FYPO:0000009 ! abnormal cell adhesion intersection_of: PATO:0001508 intersection_of: inheres_in GO:0031589 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000011 name: abnormal cell cycle progression alt_id: FYPO:0000406 def: "A cellular process phenotype in which a cell does not proceed normally through a cell cycle." [PomBase:mah] synonym: "abnormal cell-division cycle" EXACT [GO:0007049, PomBase:mah] synonym: "cell cycle defects" EXACT [PomBase:mah] synonym: "cell cycle progression: abnormal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000628 ! abnormal cellular process is_a: FYPO:0000631 ! cell cycle phenotype intersection_of: PATO:0000001 intersection_of: inheres_in GO:0007049 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000012 name: mitotic G2/M transition delay alt_id: FYPO:0000401 alt_id: FYPO:0000606 def: "A cell cycle phenotype in which the G2/M transition of the mitotic cell cycle takes place later than normal. The duration of G2 phase is thus longer than normal." [PomBase:mah] synonym: "cell cycle progression through the G2/M phase transition: delayed" EXACT [SGD:phenotype_annotation] synonym: "cell cycle, G2 delay" EXACT [PomBase:mah] synonym: "delayed cell cycle progression through mitotic G2/M phase transition" EXACT [] synonym: "G2 delay" EXACT [PomBase:mah] synonym: "increased duration of mitotic G2 phase" EXACT [] synonym: "increased G2 duration" EXACT [PomBase:mah] synonym: "mitotic cell cycle delay at G2/M transition" EXACT [PomBase:mah] synonym: "mitotic cell cycle progression in G2 phase: increased duration" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000399 ! abnormal cell cycle progression through mitotic G2/M phase transition is_a: FYPO:0000409 ! delayed cell cycle progression intersection_of: PATO:0000001 intersection_of: inheres_in GO:0000086 intersection_of: qualifier PATO:0001542 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000013 name: T-shaped cells def: "A cell morphology phenotype in which a single cell grows in the form of the letter T. The cell usually septates perpendicular to the normal septation axis, and divides to form normal-shaped daughter cells." [PomBase:mah, PomBase:vw] synonym: "cell morphology, T shaped" EXACT [PomBase:mah] is_a: FYPO:0000005 ! abnormal cell morphology intersection_of: PATO:0001200 intersection_of: inheres_in CL:0000000 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000014 name: bottle-shaped cells def: "A cell morphology phenotype in which the cell tapers at one end to a diameter smaller than the other." [PomBase:mah] synonym: "cell morphology, bottle/skittle" EXACT [PomBase:mah] synonym: "skittle-shaped cells" EXACT [PomBase:mah] is_a: FYPO:0000005 ! abnormal cell morphology intersection_of: PATO:0002213 intersection_of: inheres_in CL:0000000 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000015 name: branched cells def: "A cell morphology phenotype in which a daughter cell grows from near, and at approximately a right angle to, the septum of the mother cell, resulting in the formation of a branched, septated cell. Cell division may give rise to branched or unbranched daughter cells." [PomBase:jh, PomBase:mah] synonym: "cell morphology, branched" EXACT [PomBase:mah] is_a: FYPO:0000005 ! abnormal cell morphology intersection_of: PATO:0000402 intersection_of: inheres_in CL:0000000 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000016 name: curved cells def: "A cell morphology phenotype in which cells are curved along the long axis." [PomBase:mah] synonym: "bent cells" EXACT [PomBase:mah] synonym: "cell morphology, curved" EXACT [PomBase:mah] is_a: FYPO:0000005 ! abnormal cell morphology intersection_of: PATO:0000406 intersection_of: inheres_in CL:0000000 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000017 name: elongated cells def: "A cell morphology phenotype in which cells are longer than normal." [PomBase:mah] synonym: "cell morphology, elongated cells" EXACT [PomBase:mah] is_a: FYPO:0000005 ! abnormal cell morphology intersection_of: PATO:0000573 intersection_of: inheres_in CL:0000000 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000018 name: elongated dumbbell morphology def: "A cell morphology phenotype in which a cell is shaped in the form of a dumbbell, i.e. having two connected, roughly spherical parts of approximately equal size." [PomBase:mah] synonym: "cell morphology, elongated dumbbell" EXACT [PomBase:mah] is_a: FYPO:0000005 ! abnormal cell morphology intersection_of: PATO:0000051 intersection_of: inheres_in CL:0000000 intersection_of: qualifier PATO:0000573 intersection_of: qualifier PATO:0001876 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000020 name: pear-shaped cells def: "A cell morphology phenotype in which a cell is shaped in the form of a pear." [PomBase:mah] comment: Discussing what this means; may rename. synonym: "cell morphology, pear shaped" EXACT [PomBase:mah] is_a: FYPO:0000005 ! abnormal cell morphology intersection_of: PATO:0002240 intersection_of: inheres_in CL:0000000 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000021 name: spheroid cells def: "A cell morphology phenotype in which a cell is shaped in the form of a spheroid. Spheroid cells are shorter than normal, and have approximately the same diameter as normal." [PomBase:mah] synonym: "cell morphology, round cells" RELATED [PomBase:mah] synonym: "cell morphology, rounded cells" RELATED [PomBase:mah] is_a: FYPO:0000005 ! abnormal cell morphology intersection_of: PATO:0001865 intersection_of: inheres_in CL:0000000 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000022 name: shmoos with long tips def: "A cell morphology phenotype in which a cell forms a mating projection with a longer tip than normal." [PomBase:mah] synonym: "cell morphology, shmoos with long tips" EXACT [PomBase:mah] synonym: "mating projections with long tips" EXACT [PomBase:mah] is_a: FYPO:0000357 ! abnormal shmoo morphology intersection_of: PATO:0000573 intersection_of: inheres_in GO:0043332 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000023 name: small cells def: "A cell morphology phenotype in which cells have an abnormally low volume." [PomBase:mah] is_a: FYPO:0000005 ! abnormal cell morphology intersection_of: PATO:0000596 intersection_of: inheres_in CL:0000000 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000024 name: stubby cells def: "A cell morphology phenotype in which the cell diameter is larger than normal and the cell length is shorter than normal." [PomBase:mah] synonym: "cell morphology, stubby cells" EXACT [PomBase:mah] is_a: FYPO:0000005 ! abnormal cell morphology intersection_of: PATO:0001653 intersection_of: inheres_in CL:0000000 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000025 name: swollen cells def: "A cell morphology phenotype in which a cell has a larger volume than normal." [PomBase:mah] synonym: "cell morphology, swollen cells" EXACT [PomBase:mah] is_a: FYPO:0000005 ! abnormal cell morphology intersection_of: PATO:0000595 intersection_of: inheres_in CL:0000000 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000026 name: abnormal cell polarity def: "A cellular process phenotype in which the establishment or maintenance of cell polarity is abnormal." [PomBase:mah] synonym: "abnormal establishment or maintenance of cell polarity" EXACT [PomBase:mah] synonym: "cell polarity defects" EXACT [PomBase:mah] is_a: FYPO:0000628 ! abnormal cellular process intersection_of: PATO:0000001 intersection_of: inheres_in GO:0007163 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000027 name: abnormal cell wall def: "A cellular structure phenotype in which the cell wall is abnormal." [PomBase:mah] synonym: "cell wall defects" EXACT [PomBase:mah] is_a: FYPO:0000287 ! abnormal subcellular structure intersection_of: PATO:0000001 intersection_of: inheres_in GO:0009277 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000029 name: abnormal chromosome segregation alt_id: FYPO:0000226 def: "A cellular process phenotype in which chromosome segregation is abnormal." [PomBase:mah] synonym: "centromere function defective" RELATED [PomBase:mah] synonym: "chromosome segregation defects" EXACT [PomBase:mah] is_a: FYPO:0000628 ! abnormal cellular process intersection_of: PATO:0000001 intersection_of: inheres_in GO:0007059 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000030 name: abnormal chromosome congression def: "A cellular process phenotype in which chromosome congression is abnormal." [PomBase:mah] synonym: "chromosome segregation defects, chromosome congression" EXACT [PomBase:mah] is_a: FYPO:0000029 ! abnormal chromosome segregation intersection_of: PATO:0000001 intersection_of: inheres_in GO:0051310 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000031 name: abnormal conjugation def: "A cellular process phenotype in which conjugation is abnormal." [PomBase:mah] synonym: "abnormal conjugation with cellular fusion" EXACT [PomBase:mah] synonym: "abnormal zygote formation" RELATED [PomBase:mah] synonym: "conjugation defects" EXACT [PomBase:mah] is_a: FYPO:0000301 ! mating phenotype intersection_of: PATO:0000001 intersection_of: inheres_in GO:0000747 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000032 name: abnormal cytokinesis def: "A cellular process phenotype in which cytokinesis is abnormal." [PomBase:mah] synonym: "abnormal cell cycle cytokinesis" EXACT [PomBase:mah] synonym: "cytokinesis defects" EXACT [PomBase:mah] is_a: FYPO:0000628 ! abnormal cellular process intersection_of: PATO:0000001 intersection_of: inheres_in GO:0033205 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000033 name: abnormal contractile ring localization def: "A cellular process phenotype in which contractile ring localization is abnormal." [PomBase:mah] synonym: "abnormal contractile ring localisation" EXACT [PomBase:mah] synonym: "abnormal contractile ring localization involved in cell cycle cytokinesis" EXACT [PomBase:mah] synonym: "cytokinesis defects, misplaced contractile ring" EXACT [PomBase:mah] is_a: FYPO:0000032 ! abnormal cytokinesis is_a: FYPO:0000138 ! localization phenotype intersection_of: PATO:0000001 intersection_of: inheres_in GO:0032187 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000034 name: abnormal endocytosis def: "A cellular process phenotype in which endocytosis is abnormal." [PomBase:mah] synonym: "endocytosis defects" EXACT [PomBase:mah] is_a: FYPO:0000213 ! abnormal vesicle-mediated transport intersection_of: PATO:0000001 intersection_of: inheres_in GO:0006897 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000035 name: growth auxotrophic for arginine def: "Auxotrophy in which arginine is required for cell growth." [PomBase:mah] is_a: FYPO:0000128 ! auxotrophy intersection_of: PATO:0000422 intersection_of: towards CHEBI:16467 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000036 name: growth auxotrophic for asparagine def: "Auxotrophy in which asparagine is required for cell growth." [PomBase:mah] is_a: FYPO:0000128 ! auxotrophy intersection_of: PATO:0000422 intersection_of: towards CHEBI:17196 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000037 name: growth auxotrophic for cysteine def: "Auxotrophy in which cysteine is required for cell growth." [PomBase:mah] is_a: FYPO:0000128 ! auxotrophy intersection_of: PATO:0000422 intersection_of: towards CHEBI:17561 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000038 name: growth auxotrophic for ethanolamine def: "Auxotrophy in which ethanolamine is required for cell growth." [PomBase:mah] is_a: FYPO:0000128 ! auxotrophy intersection_of: PATO:0000422 intersection_of: towards CHEBI:16000 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000039 name: growth auxotrophic for lysine def: "Auxotrophy in which lysine is required for cell growth." [PomBase:mah] is_a: FYPO:0000128 ! auxotrophy intersection_of: PATO:0000422 intersection_of: towards CHEBI:18019 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000040 name: growth auxotrophic for methionine def: "Auxotrophy in which methionine is required for cell growth." [PomBase:mah] is_a: FYPO:0000128 ! auxotrophy intersection_of: PATO:0000422 intersection_of: towards CHEBI:16643 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000041 name: growth auxotrophic for phenylalanine def: "Auxotrophy in which phenylalanine is required for cell growth." [PomBase:mah] is_a: FYPO:0000128 ! auxotrophy intersection_of: PATO:0000422 intersection_of: towards CHEBI:17295 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000042 name: growth auxotrophic for sulfite def: "Auxotrophy in which sulfite is required for cell growth." [PomBase:mah] is_a: FYPO:0000128 ! auxotrophy intersection_of: qualifier PATO:0000422 intersection_of: towards CHEBI:17359 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000043 name: abnormal glucan synthesis def: "A cellular process phenotype in which glucan biosynthesis is abnormal." [PomBase:mah] synonym: "abnormal glucan biosynthetic process" EXACT [PomBase:mah] synonym: "glucan synthesis defective" EXACT [PomBase:mah] is_a: FYPO:0000140 ! cellular metabolism phenotype intersection_of: PATO:0000001 intersection_of: inheres_in GO:0009250 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000044 name: abnormal glucose repression alt_id: FYPO:0000210 def: "A cellular process phenotype in which negative regulation of transcription by glucose is abnormal." [PomBase:mah] synonym: "abnormal negative regulation of transcription by glucose" EXACT [PomBase:mah] synonym: "glucose repression defects" EXACT [PomBase:mah] is_a: FYPO:0000298 ! cellular response phenotype is_a: FYPO:0000624 ! abnormal negative regulation of transcription intersection_of: PATO:0000001 intersection_of: inheres_in GO:0045014 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000045 name: abnormal cell growth def: "A cellular process phenotype in which cell growth is abnormal." [PomBase:mah] synonym: "growth defect" EXACT [PomBase:mah] is_a: FYPO:0000139 ! cell growth phenotype intersection_of: PATO:0000001 intersection_of: inheres_in GO:0016049 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000046 name: slow cell growth def: "A cellular process phenotype in which cell growth is slower than normal." [PomBase:mah] synonym: "decreased cell growth rate" EXACT [PomBase:mah] synonym: "growth defect, slow growth" EXACT [PomBase:mah] is_a: FYPO:0000045 ! abnormal cell growth intersection_of: PATO:0000911 intersection_of: inheres_in GO:0016049 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000047 name: normal cell growth def: "A cellular process phenotype in which cells grow at a normal rate." [PomBase:mah] synonym: "growth normal" EXACT [PomBase:mah] is_a: FYPO:0000124 ! viable is_a: FYPO:0000139 ! cell growth phenotype is_a: FYPO:0000627 ! normal cellular process intersection_of: PATO:0000001 intersection_of: inheres_in GO:0016049 intersection_of: qualifier PATO:0000461 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000048 name: invasive growth abolished alt_id: FYPO:0000465 def: "A cellular process phenotype in which invasive growth is abolished." [PomBase:mah] comment: This term was made obsolete because it is not required to describe fission yeast. synonym: "absent invasive growth" EXACT [PomBase:mah] synonym: "invasive growth: absent" EXACT [SGD:phenotype_annotation] is_obsolete: true consider: FYPO:0000551 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000049 name: inviable def: "A viability phenotype in which cells are unable to survive under normal conditions." [PomBase:mah] is_a: FYPO:0000004 ! viability intersection_of: PATO:0000718 intersection_of: inheres_in CL:0000000 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000050 name: abnormal kinetochore structure def: "A cellular structure phenotype in which the structure of the kinetochore is abnormal." [PomBase:mah] synonym: "kinetochore defects" EXACT [PomBase:mah] is_a: FYPO:0000287 ! abnormal subcellular structure intersection_of: PATO:0000001 intersection_of: inheres_in GO:0000776 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000051 name: abnormal meiosis alt_id: FYPO:0000738 def: "A cellular process phenotype in which meiosis is abnormal." [PomBase:mah] synonym: "meiosis defects" EXACT [PomBase:mah] is_a: FYPO:0000052 ! abnormal meiotic cell cycle progression is_a: FYPO:0000628 ! abnormal cellular process intersection_of: PATO:0000001 intersection_of: inheres_in GO:0007126 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000052 name: abnormal meiotic cell cycle progression def: "A cellular process phenotype in which a cell does not proceed normally through a meiotic cell cycle." [PomBase:mah] synonym: "meiotic cell cycle defects" EXACT [PomBase:mah] is_a: FYPO:0000011 ! abnormal cell cycle progression intersection_of: PATO:0000001 intersection_of: inheres_in GO:0051321 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000054 name: abnormal microtubule organization alt_id: FYPO:0000053 def: "A phenotype that affects the organization of the microtubule cytoskeleton." [PomBase:mah] synonym: "abnormal microtubule cytoskeleton organization" EXACT [PomBase:mah] synonym: "abnormal microtubule organisation" EXACT [PomBase:mah] synonym: "microtubule cytoskeleton defects" EXACT [PomBase:mah] synonym: "microtubule organization defects" EXACT [PomBase:mah] is_a: FYPO:0000297 ! microtubule cytoskeleton organization phenotype intersection_of: PATO:0000001 intersection_of: inheres_in GO:0000226 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000055 name: long microtubules def: "A microtubule organization phenotype in which cells form microtubules that are longer than normal." [PomBase:mah] synonym: "microtubule organization defects, long microtubules" EXACT [PomBase:mah] is_a: FYPO:0000054 ! abnormal microtubule organization intersection_of: PATO:0000573 intersection_of: inheres_in GO:0005874 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000056 name: mitochondria fused def: "A cellular structure phenotype in which mitochondria have fused into fewer and larger structures than normal." [PomBase:mah] is_a: FYPO:0000359 ! abnormal mitochondrial morphology intersection_of: PATO:0000642 intersection_of: inheres_in GO:0005739 intersection_of: towards GO:0005739 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000057 name: mitochondrial nucleoid enlarged def: "A cellular structure phenotype in which the mitochondrial nucleoid is larger than normal." [PomBase:mah] is_a: FYPO:0000287 ! abnormal subcellular structure intersection_of: PATO:0000586 intersection_of: inheres_in GO:0042645 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000058 name: mitochondrial nucleoid reduced number def: "A cellular structure phenotype in which a cell contains fewer mitochondrial nucleoids than normal." [PomBase:mah] is_a: FYPO:0000287 ! abnormal subcellular structure intersection_of: PATO:0001997 intersection_of: inheres_in GO:0042645 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000059 name: abnormal mitotic cell cycle progression def: "A cellular process phenotype in which a cell does not proceed normally through a mitotic cell cycle." [PomBase:mah] synonym: "mitotic cell cycle defects" EXACT [PomBase:mah] synonym: "mitotic cell cycle: abnormal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000011 ! abnormal cell cycle progression intersection_of: PATO:0000001 intersection_of: inheres_in GO:0000278 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000060 name: mononucleate def: "A cellular structure phenotype in which a cell contains a single nucleus." [PomBase:mah] is_a: FYPO:0000136 ! cellular structure phenotype intersection_of: PATO:0001407 intersection_of: inheres_in CL:0000000 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000061 name: multinucleate def: "A cellular structure phenotype in which a cell contains more than one nucleus." [PomBase:mah] is_a: FYPO:0000287 ! abnormal subcellular structure intersection_of: PATO:0001908 intersection_of: inheres_in CL:0000000 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000062 name: abnormal nuclear morphology alt_id: FYPO:0000259 def: "A cellular structure phenotype in which the morphology of the nucleus is abnormal." [PomBase:mah] synonym: "nuclear morphology defects" EXACT [PomBase:mah] is_a: FYPO:0000287 ! abnormal subcellular structure intersection_of: PATO:0000051 intersection_of: inheres_in GO:0005634 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000063 name: abnormal DNA recombination def: "A cellular process phenotype in which DNA recombination is abnormal." [PomBase:mah] synonym: "recombination defects" EXACT [PomBase:mah] is_a: FYPO:0000293 ! DNA metabolism phenotype intersection_of: inheres_in GO:0006310 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000064 name: resistance to 2-deoxyglucose def: "An increased chemical resistance phenotype in which cells grow in the presence of a higher concentration of 2-deoxyglucose than normal." [PomBase:mah] synonym: "resistance to 2-DOG" EXACT [PomBase:mah] synonym: "resistant to 2-deoxy-D-glucose" EXACT [CHEBI:15866, PomBase:mah] synonym: "resistant to 2-DOG" EXACT [PomBase:mah] is_a: FYPO:0000126 ! increased resistance to chemical intersection_of: PATO:0001552 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:15866 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000065 name: resistance to 5-azacytidine def: "An increased chemical resistance phenotype in which cells grow in the presence of a higher concentration of 5-azacytidine than normal." [PomBase:mah] synonym: "resistant to 5-azacytidine" EXACT [PomBase:mah] is_a: FYPO:0000126 ! increased resistance to chemical intersection_of: PATO:0001552 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:2038 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000066 name: resistance to L-azetidine-2-carboxylic acid def: "An increased chemical resistance phenotype in which cells grow in the presence of a higher concentration of L-azetidine-2-carboxylic acid than normal." [PomBase:mah] synonym: "resistance to (S)-azetidine-2-carboxylic acid" EXACT [CHEBI:6198, PomBase:mah] synonym: "resistance to AZC" BROAD [PomBase:mah] synonym: "resistant to L-azetidine-2-carboxylic acid" EXACT [PomBase:mah] is_a: FYPO:0000126 ! increased resistance to chemical intersection_of: PATO:0001552 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:6198 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000067 name: resistance to brefeldin A def: "An increased chemical resistance phenotype in which cells grow in the presence of a higher concentration of brefeldin A than normal." [PomBase:mah] synonym: "resistance to BFA" EXACT [PomBase:mah] synonym: "resistant to Brefeldin A" EXACT [PomBase:mah] is_a: FYPO:0000126 ! increased resistance to chemical intersection_of: PATO:0001552 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:48080 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000068 name: resistance to K-252a def: "An increased chemical resistance phenotype in which cells grow in the presence of a higher concentration of K-252a than normal." [PomBase:mah] synonym: "resistant to K-252a" EXACT [PomBase:mah] is_a: FYPO:0000126 ! increased resistance to chemical intersection_of: PATO:0001552 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:135352 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000069 name: resistance to thiabendazole def: "An increased chemical resistance phenotype in which cells grow in the presence of a higher concentration of thiabendazole than normal." [PomBase:mah] synonym: "resistance to TBZ" EXACT [PomBase:mah] synonym: "resistance to thiabendazole" EXACT [PomBase:mah] synonym: "resistant to TBZ" EXACT [CHEBI:45979, PomBase:mah] is_a: FYPO:0000126 ! increased resistance to chemical intersection_of: PATO:0001552 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:45979 [Term] id: FYPO:0000070 name: resistance to amphotericin B def: "An increased chemical resistance phenotype in which cells grow in the presence of a higher concentration of amphotericin B than normal." [PomBase:mah] synonym: "resistant to amphotericin" EXACT [PomBase:mah] is_a: FYPO:0000126 ! increased resistance to chemical intersection_of: PATO:0001552 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:2682 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000071 name: resistance to aureobasidin A def: "An increased chemical resistance phenotype in which cells grow in the presence of a higher concentration of aureobasidin A than normal." [PomBase:mah] synonym: "resistance to AbA" EXACT [PMID:9472078] synonym: "resistant to aureobasidin A" EXACT [PomBase:mah] is_a: FYPO:0000126 ! increased resistance to chemical intersection_of: PATO:0001552 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:61739 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000072 name: resistance to benomyl def: "An increased chemical resistance phenotype in which cells grow in the presence of a higher concentration of benomyl than normal." [PomBase:mah] synonym: "resistant to benomyl" EXACT [PomBase:mah] is_a: FYPO:0000126 ! increased resistance to chemical intersection_of: PATO:0001552 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:3015 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000073 name: resistance to caffeine def: "An increased chemical resistance phenotype in which cells grow in the presence of a higher concentration of caffeine than normal." [PomBase:mah] synonym: "resistant to caffeine" EXACT [PomBase:mah] is_a: FYPO:0000126 ! increased resistance to chemical intersection_of: PATO:0001552 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:27732 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000074 name: resistance to drug def: "An increased chemical resistance phenotype in which cells grow in the presence of a higher concentration of a drug than normal." [PomBase:mah] synonym: "drug resistance" EXACT [PomBase:mah] synonym: "drug resistant" EXACT [PomBase:mah] synonym: "resistant to drugs" EXACT [PomBase:mah] is_a: FYPO:0000126 ! increased resistance to chemical intersection_of: PATO:0001552 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:23888 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000075 name: resistance to lovastatin def: "An increased chemical resistance phenotype in which cells grow in the presence of a higher concentration of lovastatin than normal." [PomBase:mah] synonym: "resistant to lovastatin" EXACT [PomBase:mah] is_a: FYPO:0000126 ! increased resistance to chemical intersection_of: PATO:0001552 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:40303 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000076 name: resistance to nystatin def: "An increased chemical resistance phenotype in which cells grow in the presence of a higher concentration of nystatin than normal." [PomBase:mah] synonym: "resistant to nystatin" EXACT [PomBase:mah] is_a: FYPO:0000126 ! increased resistance to chemical intersection_of: PATO:0001552 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:7660 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000077 name: resistance to rapamycin def: "An increased chemical resistance phenotype in which cells grow in the presence of a higher concentration of rapamycin than normal." [PomBase:mah] synonym: "resistant to rapamycin" EXACT [PomBase:mah] is_a: FYPO:0000126 ! increased resistance to chemical intersection_of: PATO:0001552 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:9168 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000078 name: abnormal cellular respiration def: "A cellular process phenotype in which cellular respiration is abnormal." [PomBase:mah] synonym: "abnormal respiration" BROAD [PomBase:mah] synonym: "abnormal respiratory metabolism" EXACT [PomBase:mah] synonym: "respiratory metabolism: abnormal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000140 ! cellular metabolism phenotype intersection_of: PATO:0000001 intersection_of: inheres_in GO:0045333 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000079 name: sensitive to caspofungin def: "A phenotype in which cells show increased sensitivity to caspofungin." [PomBase:mah] synonym: "sensitive to glucan synthase inhibitor" BROAD [PomBase:mah] is_a: FYPO:0000127 ! increased sensitivity to chemical intersection_of: PATO:0001551 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:474180 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000080 name: sensitive to cold def: "A cell phenotype in which cells show increased sensitivity to cold; cells fail to grow or grow more slowly than normal at low temperatures." [PomBase:mah] is_a: FYPO:0000304 ! sensitive to stress intersection_of: PATO:0001551 intersection_of: inheres_in GO:0070417 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000081 name: sensitive to high osmolarity def: "A cell phenotype in which cells show increased sensitivity to conditions of high osmolarity." [PomBase:mah] synonym: "sensitive to hyperosmotic conditions" EXACT [PomBase:mah] is_a: FYPO:0000270 ! sensitive to osmotic stress intersection_of: PATO:0001551 intersection_of: inheres_in GO:0071474 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000082 name: sensitive to high temperature def: "A cell phenotype in which cells show increased sensitivity to heat; cells fail to grow or grow more slowly than normal at high temperatures." [PomBase:mah] synonym: "heat sensitive" EXACT [PomBase:mah] synonym: "sensitive to heat" EXACT [PomBase:mah] synonym: "temperature sensitive" RELATED [PomBase:mah] is_a: FYPO:0000212 ! abnormal cellular response to heat is_a: FYPO:0000304 ! sensitive to stress intersection_of: PATO:0001551 intersection_of: inheres_in GO:0034605 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000083 name: sensitive to enfumafungin def: "A phenotype in which cells show increased sensitivity to enfumafungin." [PomBase:mah] synonym: "sensitive to glucan synthase inhibitor" BROAD [PomBase:mah] is_a: FYPO:0000127 ! increased sensitivity to chemical intersection_of: PATO:0001551 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:61749 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000084 name: sensitive to 6-azauracil def: "A phenotype in which cells show increased sensitivity to 6-azauracil." [PomBase:mah] is_a: FYPO:0000127 ! increased sensitivity to chemical intersection_of: PATO:0001551 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:53745 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000085 name: sensitive to camptothecin def: "A phenotype in which cells show increased sensitivity to camptothecin." [PomBase:mah] synonym: "sensitive to CPT" EXACT [CHEBI:27656, PomBase:mah] is_a: FYPO:0000127 ! increased sensitivity to chemical intersection_of: PATO:0001551 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:27656 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000086 name: sensitive to tacrolimus def: "A phenotype in which cells show increased sensitivity to tacrolimus." [PomBase:mah] synonym: "sensitive to FK506" EXACT [CHEBI:61057, PomBase:mah] is_a: FYPO:0000127 ! increased sensitivity to chemical intersection_of: PATO:0001551 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:61057 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000087 name: sensitive to hydrogen peroxide def: "A phenotype in which cells show increased sensitivity to hydrogen peroxide." [PomBase:mah] synonym: "sensitive to H2O2" EXACT [PomBase:mah] is_a: FYPO:0000127 ! increased sensitivity to chemical intersection_of: PATO:0001551 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:16240 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000088 name: sensitive to hydroxyurea def: "A phenotype in which cells show increased sensitivity to hydroxyurea." [PomBase:mah] synonym: "sensitive to HU" EXACT [PomBase:mah] is_a: FYPO:0000127 ! increased sensitivity to chemical intersection_of: PATO:0001551 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:44423 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000089 name: sensitive to methyl methanesulfonate def: "A phenotype in which cells show increased sensitivity to methyl methanesulfonate." [PomBase:mah] synonym: "sensitive to MMS" EXACT [CHEBI:25255, PomBase:mah] is_a: FYPO:0000127 ! increased sensitivity to chemical intersection_of: PATO:0001551 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:25255 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000090 name: sensitive to N-ethylmaleimide def: "A phenotype in which cells show increased sensitivity to N-ethylmaleimide." [PomBase:mah] is_a: FYPO:0000127 ! increased sensitivity to chemical intersection_of: PATO:0001551 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:44485 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000091 name: sensitive to thiabendazole def: "A phenotype in which cells show increased sensitivity to thiabendazole." [PomBase:mah] synonym: "sensitive to TBZ" EXACT [CHEBI:45979, PomBase:mah] is_a: FYPO:0000127 ! increased sensitivity to chemical intersection_of: PATO:0001551 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:45979 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000092 name: sensitive to amiodarone def: "A phenotype in which cells show increased sensitivity to amiodarone." [PomBase:mah] is_a: FYPO:0000127 ! increased sensitivity to chemical intersection_of: PATO:0001551 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:2663 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000093 name: sensitive to arsenic def: "A phenotype in which cells show increased sensitivity to arsenic." [PomBase:mah] is_a: FYPO:0000127 ! increased sensitivity to chemical intersection_of: PATO:0001551 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:22632 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000094 name: sensitive to benomyl def: "A phenotype in which cells show increased sensitivity to benomyl." [PomBase:mah] is_a: FYPO:0000127 ! increased sensitivity to chemical intersection_of: PATO:0001551 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:3015 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000095 name: sensitive to bleomycin def: "A phenotype in which cells show increased sensitivity to bleomycin." [PomBase:mah] is_a: FYPO:0000127 ! increased sensitivity to chemical intersection_of: PATO:0001551 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:22907 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000096 name: sensitive to cadmium def: "A phenotype in which cells show increased sensitivity to cadmium." [PomBase:mah] is_a: FYPO:0000127 ! increased sensitivity to chemical intersection_of: PATO:0001551 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:22978 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000097 name: sensitive to caffeine def: "A phenotype in which cells show increased sensitivity to caffeine." [PomBase:mah] is_a: FYPO:0000127 ! increased sensitivity to chemical intersection_of: PATO:0001551 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:27732 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000098 name: sensitive to calcium def: "A phenotype in which cells show increased sensitivity to calcium." [PomBase:mah] is_a: FYPO:0000127 ! increased sensitivity to chemical intersection_of: PATO:0001551 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:29108 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000099 name: sensitive to canavanine def: "A phenotype in which cells show increased sensitivity to canavanine." [PomBase:mah] is_a: FYPO:0000127 ! increased sensitivity to chemical intersection_of: PATO:0001551 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:609827 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000100 name: sensitive to chloramphenicol def: "A phenotype in which cells show increased sensitivity to chloramphenicol." [PomBase:mah] is_a: FYPO:0000127 ! increased sensitivity to chemical intersection_of: PATO:0001551 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:17698 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000101 name: sensitive to chlorpropham def: "A phenotype in which cells show increased sensitivity to chlorpropham." [PomBase:mah] synonym: "sensitive to isopropyl N-3-chlorophenyl carbamate" EXACT [PomBase:mah] synonym: "sensitive to spindle poison" BROAD [PomBase:mah] is_a: FYPO:0000127 ! increased sensitivity to chemical intersection_of: PATO:0001551 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:272583 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000102 name: sensitive to cisplatin def: "A phenotype in which cells show increased sensitivity to cisplatin." [PomBase:mah] is_a: FYPO:0000127 ! increased sensitivity to chemical intersection_of: PATO:0001551 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:27899 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000103 name: sensitive to copper def: "A phenotype in which cells show increased sensitivity to copper ions." [PomBase:mah] synonym: "sensitive to copper ions" EXACT [PomBase:mah] is_a: FYPO:0000127 ! increased sensitivity to chemical intersection_of: PATO:0001551 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:23378 created_by: midori creation_date: 2011-03-29T05:53:56Z [Term] id: FYPO:0000104 name: sensitive to cycloheximide def: "A phenotype in which cells show increased sensitivity to cycloheximide." [PomBase:mah] is_a: FYPO:0000127 ! increased sensitivity to chemical intersection_of: PATO:0001551 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:27641 created_by: midori creation_date: 2011-03-29T05:54:40Z [Term] id: FYPO:0000105 name: sensitive to cyclosporin A def: "A phenotype in which cells show increased sensitivity to cyclosporin A." [PomBase:mah] synonym: "sensitive to cyclosporine" EXACT [CHEBI:4031, PomBase:mah] is_a: FYPO:0000127 ! increased sensitivity to chemical intersection_of: PATO:0001551 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:4031 created_by: midori creation_date: 2011-03-29T05:54:40Z [Term] id: FYPO:0000106 name: sensitive to hygromycin B def: "A phenotype in which cells show increased sensitivity to hygromycin B." [PomBase:mah] is_a: FYPO:0000127 ! increased sensitivity to chemical intersection_of: PATO:0001551 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:16976 created_by: midori creation_date: 2011-03-29T05:54:40Z [Term] id: FYPO:0000107 name: sensitive to latrunculin A def: "A phenotype in which cells show increased sensitivity to latrunculin A." [PomBase:mah] is_a: FYPO:0000127 ! increased sensitivity to chemical intersection_of: PATO:0001551 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:43626 created_by: midori creation_date: 2011-03-29T05:54:40Z [Term] id: FYPO:0000108 name: sensitive to menadione def: "A phenotype in which cells show increased sensitivity to menadione." [PomBase:mah] is_a: FYPO:0000127 ! increased sensitivity to chemical intersection_of: PATO:0001551 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:28869 created_by: midori creation_date: 2011-03-29T05:54:40Z [Term] id: FYPO:0000109 name: sensitive to papulacandin B def: "A phenotype in which cells show increased sensitivity to papulacandin B." [PomBase:mah] is_a: FYPO:0000127 ! increased sensitivity to chemical intersection_of: PATO:0001551 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:569624 created_by: midori creation_date: 2011-03-29T05:54:40Z [Term] id: FYPO:0000110 name: sensitive to pravastatin def: "A phenotype in which cells show increased sensitivity to pravastatin." [PomBase:mah] is_a: FYPO:0000127 ! increased sensitivity to chemical intersection_of: PATO:0001551 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:278796 created_by: midori creation_date: 2011-03-29T05:54:40Z [Term] id: FYPO:0000111 name: sensitive to rapamycin def: "A phenotype in which cells show increased sensitivity to rapamycin." [PomBase:mah] is_a: FYPO:0000127 ! increased sensitivity to chemical intersection_of: PATO:0001551 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:9168 created_by: midori creation_date: 2011-03-29T05:54:40Z [Term] id: FYPO:0000112 name: sensitive to sorbitol def: "A phenotype in which cells show increased sensitivity to sorbitol." [PomBase:mah] synonym: "sensitive to glucitol" EXACT [CHEBI:30911, PomBase:mah] is_a: FYPO:0000127 ! increased sensitivity to chemical intersection_of: PATO:0001551 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:30911 created_by: midori creation_date: 2011-03-29T05:54:40Z [Term] id: FYPO:0000113 name: sensitive to staurosporine def: "A phenotype in which cells show increased sensitivity to staurosporine." [PomBase:mah] is_a: FYPO:0000127 ! increased sensitivity to chemical intersection_of: PATO:0001551 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:15738 created_by: midori creation_date: 2011-03-29T05:54:40Z [Term] id: FYPO:0000114 name: cellular process phenotype def: "A phenotype that affects a cellular process." [PomBase:mah] is_a: FYPO:0000002 ! cell phenotype is_a: FYPO:0000300 ! biological process phenotype intersection_of: FYPO:0000001 ! phenotype intersection_of: inheres_in GO:0009987 created_by: midori creation_date: 2011-04-12T12:00:38Z [Term] id: FYPO:0000115 name: sensitive to valproic acid def: "A phenotype in which cells show increased sensitivity to valproic acid." [PomBase:mah] is_a: FYPO:0000127 ! increased sensitivity to chemical intersection_of: PATO:0001551 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:39867 created_by: midori creation_date: 2011-03-29T05:54:40Z [Term] id: FYPO:0000116 name: sensitive to zinc def: "A phenotype in which cells show increased sensitivity to zinc ions." [PomBase:mah] synonym: "sensitive to zinc ions" EXACT [PomBase:mah] is_a: FYPO:0000127 ! increased sensitivity to chemical intersection_of: PATO:0001551 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:27365 created_by: midori creation_date: 2011-03-29T05:54:40Z [Term] id: FYPO:0000117 name: abnormal septation alt_id: FYPO:0000170 def: "A cellular process phenotype in which septation is abnormal." [PomBase:mah] synonym: "abnormal barrier septum formation involved in cell cycle cytokinesis" EXACT [PomBase:mah] synonym: "septation defects" EXACT [PomBase:mah] is_a: FYPO:0000032 ! abnormal cytokinesis is_a: FYPO:0000336 ! abnormal cellular component assembly intersection_of: PATO:0000001 intersection_of: inheres_in GO:0071937 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-03-29T05:54:40Z [Term] id: FYPO:0000118 name: multiseptate def: "A septation phenotype characterized by the presence of more than one septum in a cell." [PomBase:mah] synonym: "septation defects, multiple septa" EXACT [PomBase:mah] is_a: FYPO:0000117 ! abnormal septation is_a: FYPO:0000287 ! abnormal subcellular structure intersection_of: PATO:0000470 intersection_of: inheres_in GO:0000935 created_by: midori creation_date: 2011-03-29T05:54:40Z [Term] id: FYPO:0000119 name: abnormal spindle assembly alt_id: FYPO:0000285 def: "A cellular process phenotype in which spindle assembly is abnormal." [PomBase:mah] is_a: FYPO:0000054 ! abnormal microtubule organization is_a: FYPO:0000336 ! abnormal cellular component assembly intersection_of: PATO:0000001 intersection_of: inheres_in GO:0051225 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-03-29T05:54:40Z [Term] id: FYPO:0000120 name: abnormal spindle alt_id: FYPO:0000367 def: "A cellular structure phenotype in which the structure of the mitotic or meiotic spindle is abnormal." [PomBase:mah] synonym: "abnormal spindle morphology" EXACT [] synonym: "spindle defects" EXACT [PomBase:mah] synonym: "spindle morphology: abnormal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000287 ! abnormal subcellular structure intersection_of: PATO:0000001 intersection_of: inheres_in GO:0005819 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-03-29T05:54:40Z [Term] id: FYPO:0000121 name: abnormal sporulation def: "A cellular process phenotype in which ascospore formation is abnormal." [PomBase:mah] synonym: "abnormal ascospore formation" EXACT [PomBase:mah] synonym: "sporulation defects" EXACT [PomBase:mah] is_a: FYPO:0000628 ! abnormal cellular process intersection_of: PATO:0000001 intersection_of: inheres_in GO:0030437 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-03-29T05:54:40Z [Term] id: FYPO:0000122 name: abnormal telomere maintenance def: "A cellular process phenotype in which telomere maintenance is abnormal." [PomBase:mah] synonym: "telomere maintenance defects" EXACT [PomBase:mah] is_a: FYPO:0000145 ! regulation phenotype is_a: FYPO:0000293 ! DNA metabolism phenotype intersection_of: PATO:0000001 intersection_of: inheres_in GO:0000723 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-03-29T05:54:40Z [Term] id: FYPO:0000123 name: large vacuoles def: "A cellular structure phenotype in which vacuoles are larger than normal." [PomBase:mah] synonym: "vacuole organization defects, large vacuoles" EXACT [PomBase:mah] is_a: FYPO:0000287 ! abnormal subcellular structure intersection_of: PATO:0000586 intersection_of: inheres_in GO:0000324 created_by: midori creation_date: 2011-03-29T05:54:40Z [Term] id: FYPO:0000124 name: viable def: "A viability phenotype in which cells are able to survive under normal conditions." [PomBase:mah] is_a: FYPO:0000004 ! viability intersection_of: PATO:0000719 intersection_of: inheres_in CL:0000000 created_by: midori creation_date: 2011-03-29T05:54:40Z [Term] id: FYPO:0000125 name: resistance to amiloride def: "An increased chemical resistance phenotype in which cells grow in the presence of a higher concentration of amiloride than normal." [PomBase:mah] synonym: "resistant to amiloride" EXACT [PomBase:mah] is_a: FYPO:0000126 ! increased resistance to chemical intersection_of: PATO:0001552 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:2639 created_by: midori creation_date: 2011-03-29T05:54:40Z [Term] id: FYPO:0000126 name: increased resistance to chemical def: "A phenotype in which a cell shows increased resistance to a chemical stimulus. Resistance to a chemical is usually measured by determining the maximum concentration of the chemical at which cells grow and divide." [PomBase:mah] is_a: FYPO:0000002 ! cell phenotype intersection_of: PATO:0001552 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:24431 created_by: midori creation_date: 2011-03-29T05:54:40Z [Term] id: FYPO:0000127 name: increased sensitivity to chemical def: "A phenotype in which a cell shows decreased resistance to a chemical stimulus. Resistance to a chemical is measured by determining the maximum concentration of the chemical at which cells grow and divide." [PomBase:mah] is_a: FYPO:0000002 ! cell phenotype intersection_of: PATO:0001551 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:24431 created_by: midori creation_date: 2011-03-29T05:54:40Z [Term] id: FYPO:0000128 name: auxotrophy def: "A phenotype characterized by a cell's inability to synthesize a particular organic compound required for its growth." [PATO:0000422, PomBase:mah] is_a: FYPO:0000139 ! cell growth phenotype is_a: FYPO:0000140 ! cellular metabolism phenotype intersection_of: inheres_in CL:0000000 intersection_of: qualifier PATO:0000422 created_by: midori creation_date: 2011-03-29T05:54:40Z [Term] id: FYPO:0000129 name: spherical cells def: "A cell morphology phenotype in which cells are formed in the shape of a sphere." [PomBase:mah] is_a: FYPO:0000021 ! spheroid cells intersection_of: PATO:0001499 intersection_of: inheres_in CL:0000000 created_by: midori creation_date: 2011-03-29T05:54:40Z [Term] id: FYPO:0000130 name: short spindle def: "A spindle phenotype in which the spindle is shorter than normal." [PomBase:mah] synonym: "short spindles" EXACT [PomBase:mah] synonym: "spindle defects, short spindles" EXACT [PomBase:mah] is_a: FYPO:0000120 ! abnormal spindle intersection_of: PATO:0000574 intersection_of: inheres_in GO:0005819 created_by: midori creation_date: 2011-03-29T05:54:40Z [Term] id: FYPO:0000131 name: abnormal mitotic spindle elongation def: "A spindle phenotype in which the process of mitotic spindle elongation is abnormal." [PomBase:mah] synonym: "spindle elongation defects" EXACT [PomBase:mah] is_a: FYPO:0000337 ! abnormal mitosis intersection_of: PATO:0000001 intersection_of: inheres_in GO:0000022 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-03-29T05:54:40Z [Term] id: FYPO:0000132 name: abnormal septum disassembly def: "A cellular process phenotype characterized by abnormal primary cell septum disassembly; may result in the formation of chains of attached cells." [PomBase:mah] synonym: "chained cells" RELATED [PomBase:mah] is_a: FYPO:0000628 ! abnormal cellular process intersection_of: PATO:0000001 intersection_of: inheres_in GO:0030994 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-03-29T05:54:40Z [Term] id: FYPO:0000133 name: elongated multinucleate cells def: "A cell phenotype in which cells contain more than one nucleus apiece and are elongated." [PomBase:mah] is_a: FYPO:0000017 ! elongated cells is_a: FYPO:0000061 ! multinucleate intersection_of: has_part FYPO:0000017 ! elongated cells intersection_of: has_part FYPO:0000061 ! multinucleate created_by: midori creation_date: 2011-03-29T05:54:40Z [Term] id: FYPO:0000134 name: branched, elongated, multiseptate cells def: "A cell morphology phenotype in which cells form branches near the septum, are elongated, and have more than one septum per cell." [PomBase:mah] is_a: FYPO:0000015 ! branched cells is_a: FYPO:0000223 ! elongated, multiseptate cells intersection_of: has_part FYPO:0000015 ! branched cells intersection_of: has_part FYPO:0000017 ! elongated cells intersection_of: has_part FYPO:0000118 ! multiseptate created_by: midori creation_date: 2011-03-29T05:54:40Z [Term] id: FYPO:0000135 name: abnormal plasma membrane sterol distribution def: "A localization phenotype in which the distribution of sterols in the plasma membrane is abnormal." [PomBase:mah] synonym: "abnormal regulation of plasma membrane sterol distribution" EXACT [PomBase:mah] synonym: "localization defects, sterol distribution defects" EXACT [PomBase:mah] is_a: FYPO:0000138 ! localization phenotype is_a: FYPO:0000145 ! regulation phenotype intersection_of: PATO:0000001 intersection_of: inheres_in GO:0097036 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-03-29T05:54:40Z [Term] id: FYPO:0000136 name: cellular structure phenotype def: "A phenotype that affects the structure of a cell or a cellular component." [PomBase:mah] is_a: FYPO:0000002 ! cell phenotype intersection_of: FYPO:0000002 ! cell phenotype intersection_of: inheres_in GO:0005575 created_by: midori creation_date: 2011-04-12T12:01:21Z [Term] id: FYPO:0000137 name: cell cycle checkpoint phenotype def: "A cell phenotype that affects any cell cycle checkpoint." [PomBase:mah] is_a: FYPO:0000145 ! regulation phenotype is_a: FYPO:0000631 ! cell cycle phenotype intersection_of: FYPO:0000002 ! cell phenotype intersection_of: inheres_in GO:0000075 created_by: midori creation_date: 2011-04-12T12:55:38Z [Term] id: FYPO:0000138 name: localization phenotype def: "A cell phenotype that affects the localization of a structure or substance in a cell." [PomBase:mah] synonym: "localisation phenotype" EXACT [PomBase:mah] is_a: FYPO:0000114 ! cellular process phenotype intersection_of: FYPO:0000002 ! cell phenotype intersection_of: inheres_in GO:0051641 created_by: midori creation_date: 2011-04-12T02:16:04Z [Term] id: FYPO:0000139 name: cell growth phenotype def: "A cell phenotype that affects the rate or extent of cell growth." [PomBase:mah] is_a: FYPO:0000114 ! cellular process phenotype intersection_of: FYPO:0000002 ! cell phenotype intersection_of: inheres_in GO:0016049 created_by: midori creation_date: 2011-04-12T02:22:51Z [Term] id: FYPO:0000140 name: cellular metabolism phenotype def: "A cellular process phenotype that affects metabolism in the cell." [PomBase:mah] is_a: FYPO:0000114 ! cellular process phenotype intersection_of: FYPO:0000002 ! cell phenotype intersection_of: inheres_in GO:0044237 created_by: midori creation_date: 2011-04-12T02:23:26Z [Term] id: FYPO:0000141 name: abnormal mitotic sister chromatid segregation def: "A cellular process phenotype in which mitotic sister chromatid segregation is abnormal." [PomBase:mah] synonym: "abnormal mitotic chromosome segregation" EXACT [PomBase:mah] synonym: "chromosome segregation defects, mitotic" EXACT [PomBase:mah] is_a: FYPO:0000029 ! abnormal chromosome segregation intersection_of: PATO:0000001 intersection_of: inheres_in GO:0000070 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-04-12T05:41:15Z [Term] id: FYPO:0000142 name: gene expression phenotype def: "A cellular process phenotype that affects gene expression." [PomBase:mah] is_a: FYPO:0000114 ! cellular process phenotype intersection_of: FYPO:0000002 ! cell phenotype intersection_of: inheres_in GO:0010467 created_by: midori creation_date: 2011-04-12T05:46:51Z [Term] id: FYPO:0000143 name: transcription regulation phenotype def: "A gene expression phenotype that affects the regulation of DNA-dependent transcription." [PomBase:mah] synonym: "gene-specific transcription regulation phenotype" RELATED [GO:0006355, PomBase:mah] synonym: "transcriptional control phenotype" BROAD [GO:0006355, PomBase:mah] is_a: FYPO:0000288 ! gene expression regulation phenotype intersection_of: FYPO:0000002 ! cell phenotype intersection_of: inheres_in GO:0006355 created_by: midori creation_date: 2011-04-12T05:47:38Z [Term] id: FYPO:0000144 name: abnormal chromatin silencing def: "A transcription regulation phenotype in which chromatin silencing is abnormal." [PomBase:mah] is_a: FYPO:0000574 ! abnormal gene silencing is_a: FYPO:0000624 ! abnormal negative regulation of transcription intersection_of: PATO:0000001 intersection_of: inheres_in GO:0006342 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-04-12T05:48:37Z [Term] id: FYPO:0000145 name: regulation phenotype def: "A cellular process phenotype that affects the regulation of a molecular function, biological process, or biological quality." [PomBase:mah] is_a: FYPO:0000114 ! cellular process phenotype intersection_of: FYPO:0000002 ! cell phenotype intersection_of: inheres_in GO:0065007 created_by: midori creation_date: 2011-04-12T06:00:44Z [Term] id: FYPO:0000146 name: abnormal chromatin silencing at centromere def: "A transcription regulation phenotype in which chromatin silencing at centromeric regions is abnormal." [PomBase:mah] is_a: FYPO:0000144 ! abnormal chromatin silencing intersection_of: PATO:0000001 intersection_of: inheres_in GO:0030702 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-04-13T03:34:54Z [Term] id: FYPO:0000147 name: abnormal activation of bipolar cell growth def: "A regulation phenotype in which activation of bipolar cell growth is abnormal; results in abnormal new end take-off." [PomBase:mah] synonym: "abnormal NETO" EXACT [PomBase:mah] synonym: "abnormal new end take off" EXACT [PomBase:mah] is_a: FYPO:0000191 ! abnormal regulation of establishment or maintenance of cell polarity intersection_of: PATO:0000001 intersection_of: inheres_in GO:0051519 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-04-13T03:34:54Z [Term] id: FYPO:0000148 name: abnormal regulation of mitotic cell cycle def: "A regulation phenotype in which regulation of the mitotic cell cycle is abnormal." [PomBase:mah] is_a: FYPO:0000011 ! abnormal cell cycle progression is_a: FYPO:0000145 ! regulation phenotype intersection_of: PATO:0000001 intersection_of: inheres_in GO:0007346 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-04-13T03:34:54Z [Term] id: FYPO:0000149 name: transport phenotype def: "A cell process phenotype that affects a transport process." [PomBase:mah] is_a: FYPO:0000138 ! localization phenotype intersection_of: FYPO:0000002 ! cell phenotype intersection_of: inheres_in GO:0006810 created_by: midori creation_date: 2011-04-14T05:43:20Z [Term] id: FYPO:0000150 name: abnormal colony morphology def: "A cell population phenotype in which the morphology of a colony growing on a solid surface is abnormal." [PomBase:mah] is_a: FYPO:0000003 ! cell population phenotype created_by: midori creation_date: 2011-04-19T02:50:53Z [Term] id: FYPO:0000151 name: abnormal meiotic chromosome segregation def: "A cellular process phenotype in which meiotic chromosome segregation is abnormal." [PomBase:mah] is_a: FYPO:0000029 ! abnormal chromosome segregation is_a: FYPO:0000051 ! abnormal meiosis intersection_of: PATO:0000001 intersection_of: inheres_in GO:0045132 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-04-13T03:34:54Z [Term] id: FYPO:0000152 name: abnormal cellular response to nitrogen starvation def: "A stress response phenotype in which the response to nitrogen starvation is abnormal." [PomBase:mah] is_a: FYPO:0000713 ! abnormal cellular response to starvation intersection_of: PATO:0000001 intersection_of: inheres_in GO:0006995 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-04-13T03:34:54Z [Term] id: FYPO:0000153 name: clumped cells def: "A colony morphology phenotype in which cells form clumps due to incomplete hydrolysis of septum edging material; cells remain attached via remnants of the septum edging." [PMID:15194814, PomBase:mah] is_a: FYPO:0000150 ! abnormal colony morphology created_by: midori creation_date: 2011-04-19T02:50:53Z [Term] id: FYPO:0000154 name: abnormal negative regulation of G0 to G1 transition def: "A regulation phenotype in which negative regulation of the G0 to G1 transition is abnormal." [PomBase:mah] synonym: "abnormal maintenance of cell cycle quiescence" EXACT [PomBase:mah] synonym: "abnormal maintenance of cell quiescence" EXACT [PomBase:mah] synonym: "abnormal maintenance of G0 arrest" EXACT [PomBase:mah] synonym: "abnormal maintenance of G0 phase" EXACT [PomBase:mah] is_a: FYPO:0000145 ! regulation phenotype intersection_of: PATO:0000001 intersection_of: inheres_in GO:0070317 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-04-13T03:34:54Z [Term] id: FYPO:0000155 name: flocculating cells alt_id: FYPO:0000462 def: "A cell population phenotype that reflects increased occurrence of flocculation. Flocculation is the non-sexual aggregation of single cells." [GO:0000128, PomBase:mah] synonym: "flocculation: increased" EXACT [SGD:phenotype_annotation] synonym: "increased flocculation" EXACT [PomBase:mah] is_a: FYPO:0000003 ! cell population phenotype is_a: FYPO:0000300 ! biological process phenotype intersection_of: PATO:0002051 intersection_of: inheres_in GO:0000128 created_by: midori creation_date: 2011-04-19T02:50:53Z [Term] id: FYPO:0000156 name: abnormal chromatin silencing at silent mating-type cassette def: "A transcription regulation phenotype in which chromatin silencing at the silent mating-type cassettes is abnormal." [PomBase:mah] is_a: FYPO:0000144 ! abnormal chromatin silencing intersection_of: PATO:0000001 intersection_of: inheres_in GO:0030466 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-04-13T03:34:54Z [Term] id: FYPO:0000157 name: abnormal response to DNA damage stimulus def: "A stress response phenotype in which the response to DNA damage is abnormal." [PomBase:mah] is_a: FYPO:0000162 ! abnormal cellular response to stress intersection_of: PATO:0000001 intersection_of: inheres_in GO:0006974 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-04-13T03:34:54Z [Term] id: FYPO:0000158 name: DNA content increased def: "A cell phenotype in which a cell contains more DNA than normal." [PomBase:mah] is_a: FYPO:0000002 ! cell phenotype intersection_of: PATO:0001162 intersection_of: inheres_in CL:0000000 intersection_of: towards CHEBI:16991 created_by: midori creation_date: 2011-04-19T02:59:38Z [Term] id: FYPO:0000159 name: abnormal chromosome condensation alt_id: FYPO:0000028 def: "A cellular process phenotype in which chromosome condensation is abnormal." [PomBase:mah] synonym: "chromosome condensation defects" EXACT [PomBase:mah] is_a: FYPO:0000293 ! DNA metabolism phenotype intersection_of: PATO:0000001 intersection_of: inheres_in GO:0030261 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-04-14T10:44:38Z [Term] id: FYPO:0000160 name: DNA fragmentation def: "A cell phenotype in which DNA is broken into small fragments." [PomBase:mah] is_a: FYPO:0000287 ! abnormal subcellular structure intersection_of: PATO:0001444 intersection_of: inheres_in CHEBI:16991 created_by: midori creation_date: 2011-04-19T02:59:38Z [Term] id: FYPO:0000161 name: abnormal actomyosin contractile ring assembly def: "A cellular process phenotype in which contractile ring assembly is abnormal." [PomBase:mah] synonym: "abnormal contractile ring assembly" EXACT [PomBase:mah] synonym: "abnormal cytokinesis, actomyosin contractile ring assembly" EXACT [PomBase:mah] is_a: FYPO:0000032 ! abnormal cytokinesis is_a: FYPO:0000296 ! actin cytoskeleton organization phenotype is_a: FYPO:0000336 ! abnormal cellular component assembly intersection_of: PATO:0000001 intersection_of: inheres_in GO:0000915 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-04-13T03:34:54Z [Term] id: FYPO:0000162 name: abnormal cellular response to stress def: "A cellular response phenotype in which a cellular response to stress is abnormal." [PomBase:mah] is_a: FYPO:0000298 ! cellular response phenotype intersection_of: PATO:0000001 intersection_of: inheres_in GO:0033554 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-04-13T03:34:54Z [Term] id: FYPO:0000163 name: abnormal autophagy alt_id: FYPO:0000379 def: "A cellular process phenotype in which autophagy is abnormal." [PomBase:mah] synonym: "autophagy: abnormal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000140 ! cellular metabolism phenotype intersection_of: PATO:0000001 intersection_of: inheres_in GO:0006914 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-04-13T03:34:54Z [Term] id: FYPO:0000164 name: abnormal cytokinetic cell separation def: "A cellular process phenotype in which cytokinetic cell separation is abnormal." [PomBase:mah] is_a: FYPO:0000032 ! abnormal cytokinesis intersection_of: PATO:0000001 intersection_of: inheres_in GO:0000920 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-04-13T03:34:54Z [Term] id: FYPO:0000165 name: abnormal regulation of conjugation def: "A regulation phenotype in which regulation of conjugation is abnormal." [PomBase:mah] synonym: "abnormal regulation of conjugation with cellular fusion" EXACT [PomBase:mah] is_a: FYPO:0000145 ! regulation phenotype intersection_of: PATO:0000001 intersection_of: inheres_in GO:0031137 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-04-13T03:34:54Z [Term] id: FYPO:0000166 name: abnormal regulation of G2/M transition of mitotic cell cycle def: "A regulation phenotype in which negative regulation of the G2 to M transition of the mitotic cell cycle is abnormal." [PomBase:mah] is_a: FYPO:0000148 ! abnormal regulation of mitotic cell cycle intersection_of: PATO:0000001 intersection_of: inheres_in GO:0010389 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-04-13T03:34:54Z [Term] id: FYPO:0000167 name: increased DNA recombination at mitotic DNA replication fork barriers def: "A cellular process phenotype in which the frequency of DNA recombination at replication fork barriers is increased." [PomBase:mah] synonym: "DNA recombination defect, at mitotic DNA replication fork barriers, elevated" EXACT [PomBase:mah] is_a: FYPO:0000063 ! abnormal DNA recombination created_by: midori creation_date: 2011-04-19T02:59:38Z [Term] id: FYPO:0000168 name: abnormal mitotic cell cycle spindle assembly checkpoint def: "A cell cycle checkpoint phenotype that affects the spindle assembly checkpoint of a mitotic cell cycle." [PomBase:mah] is_a: FYPO:0000137 ! cell cycle checkpoint phenotype is_a: FYPO:0000200 ! abnormal regulation of mitotic metaphase/anaphase transition intersection_of: PATO:0000001 intersection_of: inheres_in GO:0007094 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-04-13T03:34:54Z [Term] id: FYPO:0000169 name: abnormal chromatin silencing at telomere def: "A transcription regulation phenotype in which chromatin silencing at telomeric regions is abnormal." [PomBase:mah] is_a: FYPO:0000144 ! abnormal chromatin silencing intersection_of: PATO:0000001 intersection_of: inheres_in GO:0006348 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-04-13T03:34:54Z [Term] id: FYPO:0000171 name: abnormal late endosome to vacuole transport def: "A transport phenotype in which late endosome to vacuole transport is abnormal." [PomBase:mah] is_a: FYPO:0000213 ! abnormal vesicle-mediated transport is_a: FYPO:0000597 ! abnormal vacuolar transport intersection_of: PATO:0000001 intersection_of: inheres_in GO:0045324 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-04-13T03:34:54Z [Term] id: FYPO:0000172 name: abnormal meiotic telomere clustering def: "A meiosis phenotype in which meiotic telomere clustering is abnormal." [PomBase:mah] is_a: FYPO:0000051 ! abnormal meiosis is_a: FYPO:0000138 ! localization phenotype intersection_of: PATO:0000001 intersection_of: inheres_in GO:0045141 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-04-13T03:34:54Z [Term] id: FYPO:0000173 name: abnormal mitotic cell cycle DNA replication checkpoint def: "A cell cycle checkpoint phenotype that affects the DNA replication checkpoint in a mitotic cell cycle." [PomBase:mah] is_a: FYPO:0000166 ! abnormal regulation of G2/M transition of mitotic cell cycle is_a: FYPO:0000643 ! abnormal DNA integrity checkpoint intersection_of: PATO:0000001 intersection_of: inheres_in GO:0033314 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-04-13T03:34:54Z [Term] id: FYPO:0000174 name: abnormal cell wall biogenesis def: "A cellular process phenotype in which cell wall biogenesis is abnormal." [PomBase:mah] synonym: "abnormal fungal-type cell wall biogenesis" EXACT [PomBase:mah] is_a: FYPO:0000628 ! abnormal cellular process intersection_of: PATO:0000001 intersection_of: inheres_in GO:0009272 intersection_of: qualifier PATO:0000460 relationship: results_in_formation_of FYPO:0000027 ! abnormal cell wall created_by: midori creation_date: 2011-04-13T03:34:54Z [Term] id: FYPO:0000175 name: abnormal ascospore wall assembly def: "A sporulation phenotype in which ascospore wall assembly is abnormal." [PomBase:mah] synonym: "abnormal spore wall formation" RELATED [PomBase:mah] synonym: "spore wall formation: abnormal" RELATED [SGD:phenotype_annotation] is_a: FYPO:0000336 ! abnormal cellular component assembly intersection_of: PATO:0000001 intersection_of: inheres_in GO:0030476 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-04-13T03:34:54Z [Term] id: FYPO:0000176 name: abnormal DNA replication initiation def: "A cellular process phenotype in which the initiation of DNA replication is abnormal." [PomBase:mah] synonym: "abnormal DNA-dependent DNA replication initiation" EXACT [PomBase:mah] is_a: FYPO:0000217 ! abnormal DNA replication intersection_of: PATO:0000001 intersection_of: inheres_in GO:0006270 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-04-13T03:34:54Z [Term] id: FYPO:0000177 name: abnormal mitotic spindle assembly def: "A cellular process phenotype in which assembly of the mitotic spindle is abnormal." [PomBase:mah] synonym: "abnormal spindle assembly involved in mitosis" EXACT [PomBase:mah] is_a: FYPO:0000119 ! abnormal spindle assembly is_a: FYPO:0000337 ! abnormal mitosis intersection_of: PATO:0000001 intersection_of: inheres_in GO:0090307 intersection_of: qualifier PATO:0000460 relationship: results_in_formation_of FYPO:0000338 ! abnormal mitotic spindle created_by: midori creation_date: 2011-04-13T03:34:54Z [Term] id: FYPO:0000178 name: abnormal regulation of cytokinesis def: "A regulation phenotype in which regulation of cytokinesis is abnormal." [PomBase:mah] synonym: "abnormal regulation of cell cycle cytokinesis" EXACT [PomBase:mah] is_a: FYPO:0000145 ! regulation phenotype intersection_of: PATO:0000001 intersection_of: inheres_in GO:0071775 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-04-13T03:34:54Z [Term] id: FYPO:0000179 name: abnormal protein targeting via the multivesicular body sorting pathway def: "A cellular process phenotype in which protein targeting to the vacuole via the multivesicular sorting pathway, leading to ubiquitin-dependent protein degradation, is abnormal." [PomBase:mah] synonym: "abnormal protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway" EXACT [PomBase:mah] is_a: FYPO:0000171 ! abnormal late endosome to vacuole transport is_a: FYPO:0000676 ! abnormal protein targeting to vacuole intersection_of: PATO:0000001 intersection_of: inheres_in GO:0043328 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-04-13T03:34:54Z [Term] id: FYPO:0000180 name: abnormal cellular response to oxidative stress def: "A stress response phenotype in which a cellular response to oxidative stress is abnormal." [PomBase:mah] is_a: FYPO:0000162 ! abnormal cellular response to stress intersection_of: PATO:0000001 intersection_of: inheres_in GO:0034599 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-04-13T03:34:54Z [Term] id: FYPO:0000181 name: crossover abolished def: "A DNA recombination phenotype in which reciprocal DNA recombination does not occur." [PomBase:mah] synonym: "DNA recombination defects, crossover, abolished" EXACT [PomBase:mah] is_a: FYPO:0000063 ! abnormal DNA recombination intersection_of: PATO:0001508 intersection_of: inheres_in GO:0035825 created_by: midori creation_date: 2011-04-19T02:59:38Z [Term] id: FYPO:0000182 name: abnormal cell wall organization def: "A cellular process phenotype in which cell wall organization is abnormal." [PomBase:mah] synonym: "abnormal cell wall organisation" EXACT [PomBase:mah] synonym: "abnormal fungal-type cell wall organization" EXACT [PomBase:mah] is_a: FYPO:0000628 ! abnormal cellular process intersection_of: PATO:0000001 intersection_of: inheres_in GO:0031505 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-04-13T03:34:54Z [Term] id: FYPO:0000183 name: abnormal poly(A)+ mRNA export from nucleus def: "A transport phenotype in which the export of polyadenylated mRNA from the nucleus is abnormal." [PomBase:mah] is_a: FYPO:0000204 ! abnormal mRNA export from nucleus intersection_of: PATO:0000001 intersection_of: inheres_in GO:0016973 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-04-13T03:34:54Z [Term] id: FYPO:0000184 name: abnormal regulation of filamentous growth def: "A regulation phenotype in which regulation of filamentous growth is abnormal." [PomBase:mah] is_a: FYPO:0000145 ! regulation phenotype intersection_of: PATO:0000001 intersection_of: inheres_in GO:0010570 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-04-13T03:34:54Z [Term] id: FYPO:0000185 name: reduced gene conversion def: "A DNA recombination phenotype in which the occurrence of gene conversion is reduced." [PomBase:mah] synonym: "DNA recombination defects, gene conversion, reduced" EXACT [PomBase:mah] is_a: FYPO:0000063 ! abnormal DNA recombination intersection_of: PATO:0002052 intersection_of: inheres_in GO:0035822 creation_date: 2011-04-19T02:59:38Z [Term] id: FYPO:0000186 name: abnormal cell division def: "A cellular process phenotype in which cell division is abnormal." [PomBase:mah] is_a: FYPO:0000628 ! abnormal cellular process intersection_of: PATO:0000001 intersection_of: inheres_in GO:0051301 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-04-13T03:41:10Z [Term] id: FYPO:0000187 name: abnormal chromatin silencing by small RNA def: "A transcription regulation phenotype in which chromatin silencing mediated by small RNA is abnormal." [PomBase:mah] is_a: FYPO:0000144 ! abnormal chromatin silencing intersection_of: PATO:0000001 intersection_of: inheres_in GO:0031048 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-04-13T03:41:10Z [Term] id: FYPO:0000188 name: abnormal DNA repair def: "A cellular process phenotype in which DNA repair is abnormal." [PomBase:mah] is_a: FYPO:0000157 ! abnormal response to DNA damage stimulus is_a: FYPO:0000293 ! DNA metabolism phenotype intersection_of: PATO:0000001 intersection_of: inheres_in GO:0006281 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-04-13T03:41:10Z [Term] id: FYPO:0000189 name: abnormal nuclear mRNA splicing, via spliceosome def: "A cellular process phenotype in which mRNA splicing via the spliceosome is abnormal." [PomBase:mah] is_a: FYPO:0000294 ! RNA metabolism phenotype intersection_of: PATO:0000001 intersection_of: inheres_in GO:0000398 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-04-13T03:41:10Z [Term] id: FYPO:0000190 name: abnormal actin cortical patch localization def: "A cellular process phenotype in which actin cortical patch localization is abnormal." [PomBase:mah] synonym: "abnormal actin cortical patch localisation" EXACT [PomBase:mah] is_a: FYPO:0000138 ! localization phenotype is_a: FYPO:0000296 ! actin cytoskeleton organization phenotype intersection_of: PATO:0000001 intersection_of: inheres_in GO:0051666 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-04-13T03:41:10Z [Term] id: FYPO:0000191 name: abnormal regulation of establishment or maintenance of cell polarity def: "A regulation phenotype in which regulation of the establishment or maintenance of cell polarity is abnormal." [PomBase:mah] is_a: FYPO:0000145 ! regulation phenotype intersection_of: PATO:0000001 intersection_of: inheres_in GO:0032878 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-04-13T03:41:10Z [Term] id: FYPO:0000192 name: abnormal regulation of S phase of mitotic cell cycle def: "A regulation phenotype in which regulation of progression through S phase of the mitotic cell cycle is abnormal." [PomBase:mah] is_a: FYPO:0000148 ! abnormal regulation of mitotic cell cycle intersection_of: PATO:0000001 intersection_of: inheres_in GO:0007090 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-04-13T03:41:10Z [Term] id: FYPO:0000193 name: abnormal cellular response to osmotic stress def: "A stress response phenotype in which a cellular response to osmotic stress is abnormal." [PomBase:mah] is_a: FYPO:0000162 ! abnormal cellular response to stress intersection_of: PATO:0000001 intersection_of: inheres_in GO:0071470 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-04-13T03:41:10Z [Term] id: FYPO:0000194 name: abnormal cellular response to hydrogen peroxide def: "A stress response phenotype in which a cellular response to hydrogen peroxide is abnormal." [PomBase:mah] is_a: FYPO:0000180 ! abnormal cellular response to oxidative stress intersection_of: PATO:0000001 intersection_of: inheres_in GO:0070301 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-04-13T03:41:10Z [Term] id: FYPO:0000196 name: abnormal prospore formation def: "A sporulation phenotype in which prospore formation is abnormal." [PomBase:mah] synonym: "abnormal ascospore-type prospore formation" EXACT [PomBase:mah] is_a: FYPO:0000336 ! abnormal cellular component assembly intersection_of: PATO:0000001 intersection_of: inheres_in GO:0031321 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-04-13T03:41:10Z [Term] id: FYPO:0000197 name: abnormal dynein-driven meiotic oscillatory nuclear movement def: "A cellular process phenotype in which dynein-driven oscillatory nuclear movement during meiosis is abnormal." [PomBase:mah] is_a: FYPO:0000149 ! transport phenotype intersection_of: PATO:0000001 intersection_of: inheres_in GO:0030989 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-04-13T03:41:10Z [Term] id: FYPO:0000198 name: abnormal establishment or maintenance of actin cytoskeleton polarity def: "A cellular process phenotype in which the establishment or maintenance of actin cytoskeleton polarity is abnormal." [PomBase:mah] is_a: FYPO:0000026 ! abnormal cell polarity is_a: FYPO:0000296 ! actin cytoskeleton organization phenotype intersection_of: PATO:0000001 intersection_of: inheres_in GO:0030950 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-04-13T03:41:10Z [Term] id: FYPO:0000199 name: increased long tract gene conversion def: "A DNA recombination phenotype in which the occurrence of long tract gene conversion is increased." [PomBase:mah] synonym: "DNA recombination defects, long tract gene conversion, increased" EXACT [PomBase:mah] is_a: FYPO:0000063 ! abnormal DNA recombination intersection_of: PATO:0002051 intersection_of: inheres_in GO:0035824 created_by: midori creation_date: 2011-04-19T02:59:38Z [Term] id: FYPO:0000200 name: abnormal regulation of mitotic metaphase/anaphase transition def: "A regulation phenotype in which regulation of the mitotic metaphase to anaphase transition is abnormal." [PomBase:mah] is_a: FYPO:0000148 ! abnormal regulation of mitotic cell cycle intersection_of: PATO:0000001 intersection_of: inheres_in GO:0030071 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-04-13T03:41:10Z [Term] id: FYPO:0000201 name: abnormal histone deacetylation def: "A cellular process phenotype in which histone deacetylation is abnormal." [PomBase:mah] is_a: FYPO:0000330 ! abnormal histone modification intersection_of: PATO:0000001 intersection_of: inheres_in GO:0016575 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-04-13T03:41:10Z [Term] id: FYPO:0000202 name: abnormal regulation of cytokinetic cell separation def: "A regulation phenotype in which regulation of cytokinetic cell separation is abnormal." [PomBase:mah] is_a: FYPO:0000145 ! regulation phenotype intersection_of: PATO:0000001 intersection_of: inheres_in GO:0010590 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-04-13T03:41:10Z [Term] id: FYPO:0000203 name: abnormal ergosterol biosynthetic process def: "A metabolism phenotype in which ergosterol biosynthesis is abnormal." [PomBase:mah] synonym: "abnormal ergosterol biosynthesis" EXACT [PomBase:mah] is_a: FYPO:0000140 ! cellular metabolism phenotype intersection_of: PATO:0000001 intersection_of: inheres_in GO:0006696 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-04-13T03:41:10Z [Term] id: FYPO:0000204 name: abnormal mRNA export from nucleus def: "A transport phenotype in which the export of mRNA from the nucleus is abnormal." [PomBase:mah] is_a: FYPO:0000506 ! abnormal nuclear export intersection_of: PATO:0000001 intersection_of: inheres_in GO:0006406 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-04-13T03:41:10Z [Term] id: FYPO:0000205 name: DNA replication checkpoint activated def: "A cell cycle phenotype in which the DNA replication checkpoint is activated, i.e. the cell cycle is delayed or halted before nuclear division to allow DNA replication to be completed." [PomBase:mah] is_a: FYPO:0000137 ! cell cycle checkpoint phenotype created_by: midori creation_date: 2011-04-19T02:59:38Z [Term] id: FYPO:0000206 name: abnormal chromatin silencing at rDNA def: "A transcription regulation phenotype in which chromatin silencing at ribosomal DNA repeats is abnormal." [PomBase:mah] is_a: FYPO:0000144 ! abnormal chromatin silencing intersection_of: PATO:0000001 intersection_of: inheres_in GO:0000183 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-04-13T03:41:10Z [Term] id: FYPO:0000207 name: abnormal cellular response to caffeine def: "A cellular response phenotype in which the cellular response to caffeine is abnormal." [PomBase:mah] is_a: FYPO:0000298 ! cellular response phenotype intersection_of: PATO:0000001 intersection_of: inheres_in GO:0071313 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-04-13T03:41:10Z [Term] id: FYPO:0000208 name: abnormal cellular response to cadmium ion def: "A cellular response phenotype in which the cellular response to cadmium ions is abnormal." [PomBase:mah] is_a: FYPO:0000298 ! cellular response phenotype intersection_of: PATO:0000001 intersection_of: inheres_in GO:0071276 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-04-13T03:41:10Z [Term] id: FYPO:0000209 name: abnormal attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation def: "A cellular process phenotype in which the attachment of spindle microtubules to the kinetochore during the first meiotic division is abnormal." [PomBase:mah] is_a: FYPO:0000325 ! abnormal attachment of spindle microtubules to kinetochore intersection_of: PATO:0000001 intersection_of: inheres_in GO:0051455 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-04-13T03:41:10Z [Term] id: FYPO:0000211 name: abnormal response to drug def: "A chemical response phenotype in which the cellular response to a chemical is abnormal." [PomBase:mah] is_a: FYPO:0000298 ! cellular response phenotype intersection_of: PATO:0000001 intersection_of: inheres_in GO:0042493 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-04-13T03:41:10Z [Term] id: FYPO:0000212 name: abnormal cellular response to heat def: "A cellular response phenotype in which the cellular response to heat is abnormal." [PomBase:mah] is_a: FYPO:0000162 ! abnormal cellular response to stress intersection_of: PATO:0000001 intersection_of: inheres_in GO:0034605 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-04-13T03:41:10Z [Term] id: FYPO:0000213 name: abnormal vesicle-mediated transport def: "A transport phenotype in which vesicle-mediated transport is abnormal." [PomBase:mah] is_a: FYPO:0000149 ! transport phenotype intersection_of: PATO:0000001 intersection_of: inheres_in GO:0016192 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-04-13T03:41:10Z [Term] id: FYPO:0000214 name: abnormal mitotic chromosome condensation def: "A cellular process phenotype in which mitotic chromosome condensation is abnormal." [PomBase:mah] is_a: FYPO:0000159 ! abnormal chromosome condensation intersection_of: PATO:0000001 intersection_of: inheres_in GO:0007076 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-04-13T03:41:10Z [Term] id: FYPO:0000215 name: abnormal intracellular protein transport def: "A transport phenotype in which intracellular protein transport is abnormal." [PomBase:mah] is_a: FYPO:0000540 ! abnormal protein transport intersection_of: PATO:0000001 intersection_of: inheres_in GO:0006886 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-04-13T03:41:10Z [Term] id: FYPO:0000216 name: abnormal negative regulation of DNA replication initiation def: "A regulation phenotype in which negative regulation of DNA-dependent DNA replication initiation is abnormal, resulting in re-replication of all or part of the genome." [PomBase:mah] synonym: "abnormal negative regulation of DNA-dependent DNA replication initiation" EXACT [PomBase:mah] synonym: "DNA replication defects, endoreduplication" RELATED [PomBase:mah] is_a: FYPO:0000145 ! regulation phenotype is_a: FYPO:0000217 ! abnormal DNA replication intersection_of: PATO:0000001 intersection_of: inheres_in GO:0032297 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-04-19T02:59:38Z [Term] id: FYPO:0000217 name: abnormal DNA replication def: "A cellular process phenotype in which DNA replication is abnormal." [PomBase:mah] synonym: "abnormal DNA-dependent DNA replication" EXACT [PomBase:mah] is_a: FYPO:0000293 ! DNA metabolism phenotype intersection_of: PATO:0000001 intersection_of: inheres_in GO:0006261 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-04-13T03:41:10Z [Term] id: FYPO:0000218 name: decreased Mre11 complex assembly def: "A cellular process phenotype in which the occurrence of Mre11 complex assembly is reduced." [PomBase:mah] synonym: "MRN complex formation, reduced" EXACT [PomBase:mah] is_a: FYPO:0000447 ! abnormal protein complex assembly intersection_of: PATO:0002052 intersection_of: inheres_in GO:0072685 created_by: midori creation_date: 2011-04-19T02:59:38Z [Term] id: FYPO:0000219 name: increased protein oxidation def: "A cellular metabolism phenotype in which protein oxidation is increased, resulting in the accumulation of proteins with oxidative modifications including carbonylated proteins." [PomBase:mah] synonym: "accumulation of carbonylated proteins" RELATED [PomBase:mah] is_a: FYPO:0000547 ! increased protein modification intersection_of: PATO:0002051 intersection_of: inheres_in GO:0018158 created_by: midori creation_date: 2011-04-19T02:59:38Z [Term] id: FYPO:0000220 name: accumulation of non-coding outer repeat transcripts def: "A cellular metabolism phenotype in which small interfering RNA transcripts derived from the centromere outer repeat region are present at greater levels than normal." [PMID:20211136, PomBase:mah] is_a: FYPO:0000140 ! cellular metabolism phenotype created_by: midori creation_date: 2011-04-19T02:59:38Z [Term] id: FYPO:0000221 name: transcription regulation phenotype, adaptive response to loss of mtDNA def: "A transcription regulation phenotype in which the transcription of specific genes is regulated in response to the loss of mitochondrial DNA." [PMID:17868468, PomBase:mah] synonym: "adaptive expression responses" EXACT [PomBase:mah] is_a: FYPO:0000143 ! transcription regulation phenotype created_by: midori creation_date: 2011-04-19T02:59:38Z [Term] id: FYPO:0000222 name: slow aerobic cell growth def: "A cellular process phenotype in which cell growth is slower than normal under aerobic conditions." [PomBase:mah] synonym: "aerobic growth defects" EXACT [PomBase:mah] is_a: FYPO:0000046 ! slow cell growth intersection_of: PATO:0001459 intersection_of: inheres_in GO:0016049 created_by: midori creation_date: 2011-04-19T02:59:38Z [Term] id: FYPO:0000223 name: elongated, multiseptate cells def: "A cell morphology phenotype in which cells are elongated and have more than one septum per cell." [PomBase:mah] is_a: FYPO:0000017 ! elongated cells is_a: FYPO:0000118 ! multiseptate intersection_of: has_part FYPO:0000017 ! elongated cells intersection_of: has_part FYPO:0000118 ! multiseptate created_by: midori creation_date: 2011-04-19T02:59:38Z [Term] id: FYPO:0000224 name: lemon-shaped def: "A cell morphology phenotype in which a single cell grows in the form of a lemon. A lemon shape is defined mathematically as having a quadric surface in three dimensions obtained by rotating less than half of a circular arc about an axis passing through the endpoints of the arc." [http://mathworld.wolfram.com/Lemon.html, PomBase:mah] synonym: "cell morphology, lemon shaped" EXACT [PomBase:mah] is_a: FYPO:0000005 ! abnormal cell morphology created_by: midori creation_date: 2011-04-19T02:59:38Z [Term] id: FYPO:0000225 name: snowman during sporulation def: "A cell morphology phenotype in which a cell undergoing sporulation assumes a snowman shape, having two connected parts, roughly spherical, of different sizes." [PomBase:mah] synonym: "cell morphology, snowman during sporulation" EXACT [PomBase:mah] is_a: FYPO:0000005 ! abnormal cell morphology created_by: midori creation_date: 2011-04-19T02:59:38Z [Term] id: FYPO:0000227 name: chromosome loss upon segregation def: "A chromosome segregation phenotype in which one or more chromosome or minichromosome is not correctly segregated to either daughter cells." [PMID:11809834, PMID:20211136, PomBase:mah] synonym: "chromosome segregation defects, chromosome loss" EXACT [PomBase:mah] is_a: FYPO:0000029 ! abnormal chromosome segregation created_by: midori creation_date: 2011-04-19T02:59:38Z [Term] id: FYPO:0000228 name: lagging chromosomes def: "A chromosome segregation phenotype in which chromosomes do not move towards the spindle poles at the same time, but instead one or more chromosomes remain distant from the spindle pole after the bulk of the DNA has segregated." [PMID:11809834, PMID:20211136, PomBase:mah] synonym: "chromosome segregation defects, lagging chromosomes" EXACT [PomBase:mah] is_a: FYPO:0000029 ! abnormal chromosome segregation created_by: midori creation_date: 2011-04-19T02:59:38Z [Term] id: FYPO:0000229 name: cut def: "An inviable phenotype in which a cell undergoes septation despite abnormal chromosome segregation, and gives rise to inviable daughter cells." [PomBase:mah, PomBase:vw, PomBse:jh] is_a: FYPO:0000029 ! abnormal chromosome segregation created_by: midori creation_date: 2011-04-19T02:59:38Z [Term] id: FYPO:0000230 name: abnormal contractile ring actin filament organization def: "A cytokinesis phenotype in which the assembly and distribution of actin filament bundles does not occur normally, resulting in the formation of an abnormal contractile ring in which actin is absent or mislocalized." [PMID:19713940, PomBase:mah] synonym: "abnormal contractile ring actin filament organisation" EXACT [PomBase:mah] synonym: "cytokinesis defects, contractile ring actin, absent" RELATED [PomBase:mah] is_a: FYPO:0000032 ! abnormal cytokinesis is_a: FYPO:0000727 ! abnormal actin filament organization intersection_of: PATO:0000001 intersection_of: inheres_in GO:2000689 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-04-19T02:59:38Z [Term] id: FYPO:0000231 name: abnormal contractile ring myosin filament organization def: "A cytokinesis phenotype in which myosin filaments are not localized normally within the contractile ring." [PMID:19713940, PomBase:mah] synonym: "abnormal contractile ring myosin filament organisation" EXACT [PomBase:mah] synonym: "cytokinesis defects, contractile ring myosin distribution, defective" RELATED [PomBase:mah] is_a: FYPO:0000032 ! abnormal cytokinesis is_a: FYPO:0000296 ! actin cytoskeleton organization phenotype intersection_of: PATO:0000001 intersection_of: inheres_in GO:2000708 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-04-19T02:59:38Z [Term] id: FYPO:0000232 name: actomyosin contractile ring splitting def: "A cytokinesis phenotype in which the contractile ring splits upon initiation of contraction, resulting in the formation of a primary ring that undergoes constriction and a secondary ring that does not constrict." [PMID:18272786, PomBase:mah] synonym: "cytokinesis defects, splitting of the actinomyosin ring" RELATED [PomBase:mah] is_a: FYPO:0000032 ! abnormal cytokinesis intersection_of: PATO:0000001 intersection_of: inheres_in GO:0000916 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-04-19T02:59:38Z [Term] id: FYPO:0000233 name: long cytoplasmic microtubules def: "A microtubule organization phenotype in which cells form cytoplasmic microtubules that are longer than normal." [PomBase:mah] synonym: "microtubule organization defect, long cytoplasmic microtubules" EXACT [PomBase:mah] synonym: "microtubule organization defects, long cytoplasmic microtubules" EXACT [PomBase:mah] is_a: FYPO:0000055 ! long microtubules intersection_of: PATO:0000573 intersection_of: inheres_in GO:0005881 created_by: midori creation_date: 2011-04-19T02:59:38Z [Term] id: FYPO:0000234 name: abnormal interphase microtubule nucleation def: "A microtubule cytoskeleton organization phenotype in which nucleation of microtubules from interphase microtubule organizing centers (iMTOCs) is abnormal." [PMID:19001497, PomBase:mah] synonym: "abnormal interphase microtubule nucleation by interphase microtubule organizing center" EXACT [PomBase:mah] synonym: "cytoskeletal defects, cytoplasmic microtubule nucleation defects, Non-SPB" RELATED [PomBase:mah] is_a: FYPO:0000297 ! microtubule cytoskeleton organization phenotype intersection_of: PATO:0000001 intersection_of: inheres_in GO:0051415 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-04-19T02:59:38Z [Term] id: FYPO:0000235 name: abnormal regulation of translation in response to osmotic stress def: "A gene expression phenotype in which regulation of translation in response to osmotic stress is abnormal. Translation may be down-regulated to a greater extent than normal, and may not be restored to normal levels post-stress." [PMID:18065650, PomBase:mah] synonym: "defective in recovery of translation after hyperosmotic shock" RELATED [PomBase:mah] is_a: FYPO:0000263 ! abnormal regulation of translation in response to stress intersection_of: PATO:0000001 intersection_of: inheres_in GO:0043557 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-04-19T02:59:38Z [Term] id: FYPO:0000236 name: abnormal regulation of translation in response to oxidative stress def: "A gene expression phenotype in which regulation of translation in response to oxidative stress is abnormal. Translation may be down-regulated to a greater extent than normal, and may not be restored to normal levels post-stress." [PMID:18065650, PomBase:mah] synonym: "defective in recovery of translation after oxidative stress" RELATED [PomBase:mah] is_a: FYPO:0000180 ! abnormal cellular response to oxidative stress is_a: FYPO:0000263 ! abnormal regulation of translation in response to stress intersection_of: PATO:0000001 intersection_of: inheres_in GO:0043556 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-04-19T02:59:38Z [Term] id: FYPO:0000237 name: abnormal regulation of translation in response to nitrogen starvation def: "A gene expression phenotype in which regulation of translation in response to nitrogen starvation is abnormal. Translation may be down-regulated to a greater extent than normal, and may not be restored to normal levels upon prolonged nitrogen starvation." [PMID:18065650, PomBase:mah] synonym: "defective in recovery of translation during nitrogen starvation" RELATED [PomBase:mah] is_a: FYPO:0000152 ! abnormal cellular response to nitrogen starvation is_a: FYPO:0000263 ! abnormal regulation of translation in response to stress intersection_of: PATO:0000001 intersection_of: inheres_in GO:0070321 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-04-19T02:59:38Z [Term] id: FYPO:0000238 name: inviable upon G0 to G1 transition def: "A cell phenotype in which cells fail to resume growth after several days in G0 phase. The inviable cells show some features characteristic of apoptosis, including loss of DNA." [PMID:19197239, PomBase:mah] synonym: "die in G0 with an apoptotic-like phenotype" EXACT [PomBase:mah] is_a: FYPO:0000002 ! cell phenotype intersection_of: PATO:0001558 intersection_of: inheres_in GO:0045023 created_by: midori creation_date: 2011-04-19T02:59:38Z [Term] id: FYPO:0000239 name: expression of MBF target genes increased def: "A gene expression phenotype in which transcription of genes that are regulated by MBF (the MluI cell cycle box factor) is increased." [PomBase:mah] is_a: FYPO:0000142 ! gene expression phenotype created_by: midori creation_date: 2011-04-19T02:59:38Z [Term] id: FYPO:0000240 name: abnormal filament morphology def: "A cell population phenotype in which the morphology of invasively growing filaments is abnormal." [PomBase:mah] synonym: "filament morphology aberrant" EXACT [PomBase:mah] is_a: FYPO:0000003 ! cell population phenotype created_by: midori creation_date: 2011-04-19T02:59:38Z [Term] id: FYPO:0000241 name: genome stability defects def: "A cell phenotype in which any process that affects the physical integrity, replication, or segregation of genomic DNA is abnormal. Encompasses effects on DNA metabolism, chromosome organization, the spindle assembly checkpoint, and any DNA integrity checkpoint." [PomBase:jh, PomBase:mah, PomBase:vw] comment: Consider annotating to 'abnormal chromosome organization' (FYPO:0000641), 'DNA metabolism phenotype' (FYPO:0000293) or any of its children, 'abnormal mitotic cell cycle spindle assembly checkpoint' (FYPO:0000168), or 'abnormal DNA integrity checkpoint' (FYPO:0000643) or any of its children. is_a: FYPO:0000002 ! cell phenotype created_by: midori creation_date: 2011-04-19T02:59:38Z [Term] id: FYPO:0000242 name: normal cell growth on ammonia nitrogen source def: "A cell growth phenotype in which cells grow at a normal rate in a medium containing ammonia as the nitrogen source." [PomBase:mah] synonym: "growth defect, normal growth with ammonia nitrogen source" RELATED [PomBase:mah] is_a: FYPO:0000047 ! normal cell growth intersection_of: FYPO:0000047 ! normal cell growth intersection_of: inheres_in BTO:0000316 intersection_of: qualifier PATO:0000467 intersection_of: towards CHEBI:16134 created_by: midori creation_date: 2011-04-19T02:59:38Z [Term] id: FYPO:0000243 name: normal cell growth on proline nitrogen source def: "A cell growth phenotype in which cells grow at a normal rate in a medium containing L-proline as the nitrogen source." [PomBase:mah] synonym: "growth defect, normal growth with proline nitrogen source" RELATED [PomBase:mah] is_a: FYPO:0000047 ! normal cell growth intersection_of: FYPO:0000047 ! normal cell growth intersection_of: inheres_in BTO:0000316 intersection_of: qualifier PATO:0000467 intersection_of: towards CHEBI:17203 created_by: midori creation_date: 2011-04-19T02:59:38Z [Term] id: FYPO:0000244 name: loss of viability upon nutrient depletion def: "A cell population phenotype in which a smaller than normal proportion of the population remains viable when cells are deprived of nutrients such as carbon or nitrogen." [PomBase:mah] synonym: "growth defect, required during nutrient depletion" RELATED [PomBase:mah] is_a: FYPO:0000003 ! cell population phenotype created_by: midori creation_date: 2011-04-19T02:59:38Z [Term] id: FYPO:0000245 name: loss of viability in stationary phase def: "A cell population phenotype in which a smaller than normal proportion of the population remains viable after entering stationary phase." [PomBase:mah] synonym: "growth defect, required for stationary phase" RELATED [PomBase:mah] is_a: FYPO:0000003 ! cell population phenotype created_by: midori creation_date: 2011-04-19T02:59:38Z [Term] id: FYPO:0000246 name: antioxidant required for growth def: "A cell growth phenotype in which a cell grows only in the presence of an antioxidant." [PomBase:mah] synonym: "growth defect, requires antioxidant for growth" EXACT [PomBase:mah] is_a: FYPO:0000045 ! abnormal cell growth intersection_of: FYPO:0000045 ! abnormal cell growth intersection_of: inheres_in BTO:0000316 intersection_of: qualifier PATO:0000462 intersection_of: towards CHEBI:22586 created_by: midori creation_date: 2011-04-19T02:59:38Z [Term] id: FYPO:0000247 name: slow growth at high temperature def: "A cell growth phenotype in which cells grow at a slower rate than normal at a high temperature." [PomBase:mah] synonym: "growth defect, slow growth at high temperatures" EXACT [PomBase:mah] is_a: FYPO:0000046 ! slow cell growth intersection_of: FYPO:0000046 ! slow cell growth intersection_of: inheres_in BTO:0000316 intersection_of: qualifier PATO:0001305 created_by: midori creation_date: 2011-04-19T02:59:38Z [Term] id: FYPO:0000249 name: slow cell growth on ammonia nitrogen source alt_id: FYPO:0000248 def: "A cell growth phenotype in which cells grow at a slower rate than normal in a medium containing ammonia as the nitrogen source." [PomBase:mah] synonym: "growth defect, slow growth in minimal media" RELATED [PomBase:mah] synonym: "growth defect, slow growth with ammonia nitrogen source" EXACT [PomBase:mah] synonym: "slow cell growth in minimal medium" RELATED [] is_a: FYPO:0000046 ! slow cell growth intersection_of: FYPO:0000046 ! slow cell growth intersection_of: inheres_in BTO:0000316 intersection_of: qualifier PATO:0000467 intersection_of: towards CHEBI:16134 created_by: midori creation_date: 2011-04-19T02:59:38Z [Term] id: FYPO:0000250 name: slow cell growth on proline nitrogen source def: "A cell growth phenotype in which cells grow at a slower rate than normal in a medium containing L-proline as the nitrogen source." [PomBase:mah] synonym: "growth defect, slow growth with proline nitrogen source" EXACT [PomBase:mah] is_a: FYPO:0000046 ! slow cell growth intersection_of: FYPO:0000046 ! slow cell growth intersection_of: inheres_in BTO:0000316 intersection_of: qualifier PATO:0000467 intersection_of: towards CHEBI:17203 created_by: midori creation_date: 2011-04-19T02:59:38Z [Term] id: FYPO:0000251 name: slow cell growth on galactose carbon source def: "A cell growth phenotype in which cells grow at a slower rate than normal in a medium containing galactose as the carbon source." [PomBase:mah] synonym: "growth defects, growth inhibition in galactose-based medium" RELATED [PomBase:mah] is_a: FYPO:0000046 ! slow cell growth intersection_of: FYPO:0000046 ! slow cell growth intersection_of: inheres_in BTO:0000316 intersection_of: qualifier PATO:0000467 intersection_of: towards CHEBI:12936 created_by: midori creation_date: 2011-04-19T02:59:38Z [Term] id: FYPO:0000252 name: increased spontaneous diploidization def: "A cell phenotype in which heterothallic haploid cells spontaneously form cells with diploid DNA content at a higher frequency than normal." [PMID:19101542, PomBase:mah] synonym: "high-frequency diploidization in heterothallic strains" EXACT [PomBase:mah] is_a: FYPO:0000002 ! cell phenotype created_by: midori creation_date: 2011-04-19T02:59:38Z [Term] id: FYPO:0000253 name: increased HMG-CoA reductase activity def: "A molecular function phenotype in which the observed rate of hydroxymethylglutaryl-CoA reductase (NADPH) activity is increased." [PMID:19041767, PomBase:mah] is_a: FYPO:0000662 ! increased catalytic activity intersection_of: PATO:0000912 intersection_of: inheres_in GO:0004420 created_by: midori creation_date: 2011-04-19T02:59:38Z [Term] id: FYPO:0000254 name: increased Sre1 cleavage def: "A cellular metabolism phenotype in which the observed occurrence of sterol regulatory element-binding protein (SREBP; Sre1) cleavage is increased." [PMID:19520858, PomBase:mah] is_a: FYPO:0000328 ! abnormal protein metabolic process intersection_of: PATO:0002051 intersection_of: inheres_in GO:0035103 created_by: midori creation_date: 2011-04-19T02:59:38Z [Term] id: FYPO:0000255 name: nuclear accumulation of Pap1 and Sty1 def: "A localization phenotype in which the proteins Pap1 and Sty1 accumulate, and are constitutively located in, the nucleus." [PMID:12896976, PomBase:mah] synonym: "localization defects, nuclear accumulation of Pap1 and Sty1" EXACT [PomBase:mah] is_a: FYPO:0000443 ! abnormal protein localization intersection_of: PATO:0002270 intersection_of: inheres_in CL:0000000 intersection_of: towards PR:000027500 intersection_of: towards PR:000027898 created_by: midori creation_date: 2011-04-19T02:59:38Z [Term] id: FYPO:0000256 name: mutator def: "A cell phenotype in which mutations occur at a higher rate than normal." [PomBase:mah] is_a: FYPO:0000002 ! cell phenotype intersection_of: PATO:0002051 intersection_of: inheres_in SO:0001059 created_by: midori creation_date: 2011-04-19T02:59:38Z [Term] id: FYPO:0000257 name: normal phenotype def: "A cell phenotype that shows no detectable differences from normal." [PomBase:mah] synonym: "no obvious phenotype" EXACT [PomBase:mah] is_a: FYPO:0000001 ! phenotype intersection_of: PATO:0000001 intersection_of: inheres_in CL:0000000 intersection_of: qualifier PATO:0000461 created_by: midori creation_date: 2011-04-19T02:59:38Z [Term] id: FYPO:0000258 name: normal phenotype during exponential phase def: "A cell phenotype that shows no detectable differences from normal during exponential growth." [PomBase:mah] synonym: "no phenotype in exponential phase" EXACT [PomBase:mah] is_a: FYPO:0000257 ! normal phenotype created_by: midori creation_date: 2011-04-19T02:59:38Z [Term] id: FYPO:0000260 name: abnormal G1/S phase transcription def: "A gene expression phenotype in which regulation of transcription during the G1/S phase of the cell cycle is abnormal." [PomBase:mah] synonym: "abnormal regulation of transcription involved in G1/S phase of mitotic cell cycle" EXACT [PomBase:mah] synonym: "periodic cell-cycle expression, abolished" RELATED [PomBase:mah] is_a: FYPO:0000143 ! transcription regulation phenotype intersection_of: PATO:0000001 intersection_of: inheres_in GO:0000083 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-04-19T02:59:38Z [Term] id: FYPO:0000261 name: pleiotropic effects def: "Multiple different phenotypes due to a single mutation." [PomBase:mah] comment: This term was made obsolete because genes, alleles, etc. can be annotated with multiple specific phenotype terms. is_obsolete: true created_by: midori creation_date: 2011-04-19T02:59:38Z [Term] id: FYPO:0000262 name: abnormal cellular response to reactive oxygen species during G0 phase def: "A cell phenotype in which cells do not respond normally to reactive oxygen species, resulting in accumulation of oxidative damage including DNA damage, during G0 phase." [PMID:19197239, PomBase:mah] synonym: "protects against physiological oxidative damage in G0" RELATED [PomBase:mah] is_a: FYPO:0000180 ! abnormal cellular response to oxidative stress intersection_of: PATO:0000001 intersection_of: during GO:0045023 intersection_of: inheres_in GO:0034614 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-04-19T02:59:38Z [Term] id: FYPO:0000263 name: abnormal regulation of translation in response to stress def: "A gene expression phenotype in which regulation of translation in response to stress is abnormal." [PomBase:mah] synonym: "protein synthesis after stress, defective" RELATED [PomBase:mah] is_a: FYPO:0000162 ! abnormal cellular response to stress is_a: FYPO:0000289 ! translation regulation phenotype intersection_of: PATO:0000001 intersection_of: inheres_in GO:0043555 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-04-19T02:59:38Z [Term] id: FYPO:0000264 name: resistance to microtubule-destabilizing substance def: "An increased chemical resistance phenotype in which cells grow in the presence of a higher concentration of a microtubule-destabilizing substance than normal." [PomBase:mah] synonym: "resistance to microtubule depolymerizing drugs" EXACT [PomBase:mah] synonym: "resistance to microtubule destabilising substance" EXACT [PomBase:mah] is_a: FYPO:0000126 ! increased resistance to chemical intersection_of: PATO:0001552 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:61951 created_by: midori creation_date: 2011-04-19T02:59:38Z [Term] id: FYPO:0000265 name: sensitive to DNA damage def: "A cell phenotype in which cells show increased sensitivity to DNA damage." [PomBase:mah] is_a: FYPO:0000157 ! abnormal response to DNA damage stimulus is_a: FYPO:0000304 ! sensitive to stress intersection_of: PATO:0001551 intersection_of: inheres_in GO:0006974 created_by: midori creation_date: 2011-04-19T02:59:38Z [Term] id: FYPO:0000266 name: sensitive to DNA damaging agents def: "A phenotype in which cells show increased sensitivity to a genotoxin, any chemical compound that can act to induce direct or indirect DNA damage." [CHEBI:50902, PomBase:mah] is_a: FYPO:0000127 ! increased sensitivity to chemical intersection_of: PATO:0001552 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:50902 created_by: midori creation_date: 2011-04-19T02:59:38Z [Term] id: FYPO:0000267 name: sensitive to ionizing radiation def: "A cell phenotype in which cells show increased sensitivity to ionizing radiation." [PomBase:mah] synonym: "sensitive to IR" EXACT [PomBase:mah] is_a: FYPO:0000304 ! sensitive to stress intersection_of: PATO:0001551 intersection_of: inheres_in GO:0071479 created_by: midori creation_date: 2011-04-19T02:59:38Z [Term] id: FYPO:0000268 name: sensitive to UV def: "A cell phenotype in which cells show increased sensitivity to ultraviolet light." [PomBase:mah] synonym: "sensitive to ultraviolet light" EXACT [PomBase:mah] is_a: FYPO:0000304 ! sensitive to stress intersection_of: PATO:0001551 intersection_of: inheres_in GO:0034644 created_by: midori creation_date: 2011-04-19T02:59:38Z [Term] id: FYPO:0000269 name: sensitive to microtubule depolymerizing drugs def: "A phenotype in which cells show increased sensitivity to a microtubule-destabilizing substance." [PomBase:mah] is_a: FYPO:0000127 ! increased sensitivity to chemical intersection_of: PATO:0001551 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:61951 created_by: midori creation_date: 2011-04-19T02:59:38Z [Term] id: FYPO:0000270 name: sensitive to osmotic stress def: "A cell phenotype in which cells show increased sensitivity to osmotic stress." [PomBase:mah] is_a: FYPO:0000193 ! abnormal cellular response to osmotic stress is_a: FYPO:0000304 ! sensitive to stress intersection_of: PATO:0001551 intersection_of: inheres_in GO:0071470 created_by: midori creation_date: 2011-04-19T04:37:01Z [Term] id: FYPO:0000271 name: sensitive to salt stress def: "A cell phenotype in which cells show increased sensitivity to a salt stress." [PomBase:mah] is_a: FYPO:0000270 ! sensitive to osmotic stress intersection_of: PATO:0001551 intersection_of: inheres_in GO:0071472 created_by: midori creation_date: 2011-04-19T04:37:01Z [Term] id: FYPO:0000272 name: septum formation abolished def: "A septation phenotype in which a cell fails to form a septum." [PMID:9649519, PomBase:mah] synonym: "septum initiation defective" RELATED [PomBase:mah] is_a: FYPO:0000117 ! abnormal septation is_a: FYPO:0000186 ! abnormal cell division is_a: FYPO:0000417 ! cytokinesis abolished intersection_of: PATO:0001508 intersection_of: inheres_in GO:0000917 created_by: midori creation_date: 2011-04-19T04:37:01Z [Term] id: FYPO:0000273 name: siRNAs homologous to outer repeats absent def: "An RNA metabolism phenotype in which small interfering RNAs homologous to the outer repeat regions of the centromere are absent." [PMID:20211136, PomBase:mah] synonym: "siRNAs homologous to outer repeats undetectable" EXACT [PomBase:mah] is_a: FYPO:0000294 ! RNA metabolism phenotype created_by: midori creation_date: 2011-04-19T04:37:01Z [Term] id: FYPO:0000274 name: increased mitotic M phase duration def: "A cell cycle phenotype in the duration of M phase of the mitotic cell cycle is longer than normal." [PomBase:mah] synonym: "spindle checkpoint activated" RELATED [PomBase:mah] is_a: FYPO:0000607 ! abnormal mitotic M phase progression intersection_of: PATO:0000502 intersection_of: inheres_in GO:0000087 intersection_of: inheres_in GO:0007091 intersection_of: qualifier PATO:0000498 created_by: midori creation_date: 2011-04-19T04:37:01Z [Term] id: FYPO:0000275 name: spindle checkpoint required def: "A cell cycle phenotype in which cells are viable only if a spindle checkpoint functions normally." [PMID:15483052, PomBase:mah] comment: This term was made obsolete because it was used to represent two different phenotypes. is_obsolete: true consider: FYPO:0000029 consider: FYPO:0000324 consider: FYPO:0000333 created_by: midori creation_date: 2011-04-19T04:37:01Z [Term] id: FYPO:0000276 name: monopolar mitotic spindle def: "A cellular structure phenotype in which the mitotic spindle forms with microtubules emanating from only one pole." [PMID:11792803, PMID:9763447, PomBase:mah] synonym: "spindle defects, monopolar mitotic spindle" EXACT [PomBase:mah] synonym: "spindle defects, monopolar spindle" EXACT [PomBase:mah] is_a: FYPO:0000338 ! abnormal mitotic spindle created_by: midori creation_date: 2011-04-19T04:37:01Z [Term] id: FYPO:0000278 name: slow cell growth upon spore germination def: "A cellular process phenotype in which cells grow slowly following spore germination, resulting in the formation of a smaller colony than normal in a given amount of time." [PomBase:mah] synonym: "spores produced smaller colonies" RELATED [PomBase:mah] is_a: FYPO:0000046 ! slow cell growth is_a: FYPO:0000305 ! abnormal spore germination intersection_of: FYPO:0000046 ! slow cell growth intersection_of: preceded_by GO:0009847 created_by: midori creation_date: 2011-04-19T04:37:01Z [Term] id: FYPO:0000279 name: formation of azygotic asci upon sporulation def: "A sporulation phenotype in which azygotic asci form following conjugation and subsequent sporulation." [PMID:16169489, PMID:18780734, PMID:20404563, PomBase:mah] synonym: "sporulation defects, azygotic asci" EXACT [PomBase:mah] is_a: FYPO:0000121 ! abnormal sporulation created_by: midori creation_date: 2011-04-19T04:37:01Z [Term] id: FYPO:0000280 name: sterile alt_id: FYPO:0000638 def: "A cellular process phenotype in which conjugation is abolished." [PomBase:mah] synonym: "conjugation abolished" EXACT [] synonym: "zygote formation abolished" RELATED [PomBase:mah] is_a: FYPO:0000031 ! abnormal conjugation intersection_of: PATO:0001508 intersection_of: inheres_in GO:0000747 intersection_of: qualifier PATO:0001508 created_by: midori creation_date: 2011-04-19T04:37:01Z [Term] id: FYPO:0000281 name: fragmented vacuoles def: "A cell phenotype in which vacuoles are broken into more, smaller fragments than normal." [PomBase:mah] synonym: "vacuole organization defects, fragmented vacuoles" EXACT [PomBase:mah] is_a: FYPO:0000368 ! abnormal vacuolar morphology intersection_of: PATO:0001444 intersection_of: inheres_in GO:0000324 created_by: midori creation_date: 2011-04-19T04:37:01Z [Term] id: FYPO:0000282 name: viable at high temperature def: "A viability phenotype in which cells are able to survive at a high temperature." [PomBase:mah] is_a: FYPO:0000124 ! viable intersection_of: FYPO:0000124 ! viable intersection_of: inheres_in BTO:0000316 intersection_of: qualifier PATO:0001305 created_by: midori creation_date: 2011-04-19T04:37:01Z [Term] id: FYPO:0000283 name: chromosome fragmentation upon segregation def: "A chromosome segregation phenotype in which chromosomes are broken during segregation." [PomBase:mah] synonym: "chromosome segregation defects, chromosome fragmentation" EXACT [PomBase:mah] is_a: FYPO:0000029 ! abnormal chromosome segregation intersection_of: PATO:0001444 intersection_of: inheres_in GO:0005694 created_by: midori creation_date: 2011-04-19T04:37:01Z [Term] id: FYPO:0000284 name: large and small daughter nuclei def: "A mitosis phenotype in which the nucleus divides unequally to produce one daughter nucleus that is larger than the other." [PMID:8769419, PomBase:mah] is_a: FYPO:0000337 ! abnormal mitosis created_by: midori creation_date: 2011-04-19T04:37:01Z [Term] id: FYPO:0000286 name: sensitive to manganese depletion def: "A cellular process phenotype in which cells grow poorly in medium that has a low concentration of manganese (Mn2+)." [PMID:14723709, PomBase:mah] is_a: FYPO:0000045 ! abnormal cell growth intersection_of: PATO:0001163 intersection_of: inheres_in BTO:0000316 intersection_of: towards CHEBI:29035 created_by: mah79 creation_date: 2011-04-20T01:42:21Z [Term] id: FYPO:0000287 name: abnormal subcellular structure def: "A cellular structure phenotype in which the amount, distribution, or morphology of a cell part is abnormal." [PomBase:mah] is_a: FYPO:0000136 ! cellular structure phenotype intersection_of: PATO:0000051 intersection_of: inheres_in GO:0044464 intersection_of: qualifier PATO:0000460 created_by: mah79 creation_date: 2011-04-21T11:18:18Z [Term] id: FYPO:0000288 name: gene expression regulation phenotype def: "A regulation phenotype that affects the regulation of gene expression." [PomBase:mah] is_a: FYPO:0000142 ! gene expression phenotype is_a: FYPO:0000145 ! regulation phenotype intersection_of: FYPO:0000002 ! cell phenotype intersection_of: inheres_in GO:0010468 created_by: midori creation_date: 2011-04-21T02:22:36Z [Term] id: FYPO:0000289 name: translation regulation phenotype def: "A gene expression phenotype that affects the regulation of translation." [PomBase:mah] is_a: FYPO:0000288 ! gene expression regulation phenotype intersection_of: FYPO:0000002 ! cell phenotype intersection_of: inheres_in GO:0006417 created_by: midori creation_date: 2011-04-21T02:25:06Z [Term] id: FYPO:0000290 name: transcription phenotype def: "A cellular process phenotype that affects DNA-dependent transcription." [PomBase:mah] is_a: FYPO:0000294 ! RNA metabolism phenotype intersection_of: FYPO:0000002 ! cell phenotype intersection_of: inheres_in GO:0006351 created_by: midori creation_date: 2011-04-21T02:31:20Z [Term] id: FYPO:0000291 name: translation phenotype def: "A cellular process phenotype that affects translation." [PomBase:mah] is_a: FYPO:0000140 ! cellular metabolism phenotype intersection_of: FYPO:0000002 ! cell phenotype intersection_of: inheres_in GO:0006412 created_by: midori creation_date: 2011-04-21T02:31:20Z [Term] id: FYPO:0000292 name: nucleic acid metabolism phenotype def: "A cellular process phenotype that affects any nucleic acid metabolic process." [PomBase:mah] is_a: FYPO:0000140 ! cellular metabolism phenotype intersection_of: FYPO:0000002 ! cell phenotype intersection_of: inheres_in GO:0090304 created_by: midori creation_date: 2011-04-21T02:31:20Z [Term] id: FYPO:0000293 name: DNA metabolism phenotype def: "A cellular process phenotype that affects any DNA metabolic process." [PomBase:mah] is_a: FYPO:0000292 ! nucleic acid metabolism phenotype intersection_of: FYPO:0000002 ! cell phenotype intersection_of: inheres_in GO:0006259 created_by: midori creation_date: 2011-04-21T02:31:20Z [Term] id: FYPO:0000294 name: RNA metabolism phenotype def: "A cellular process phenotype that affects any RNA metabolic process." [PomBase:mah] is_a: FYPO:0000292 ! nucleic acid metabolism phenotype intersection_of: FYPO:0000002 ! cell phenotype intersection_of: inheres_in GO:0016070 created_by: midori creation_date: 2011-04-21T02:31:20Z [Term] id: FYPO:0000295 name: cytoskeleton organization phenotype def: "A cellular process phenotype that affects cytoskeleton organization." [PomBase:mah] synonym: "cytoskeleton organisation phenotype" EXACT [PomBase:mah] is_a: FYPO:0000114 ! cellular process phenotype intersection_of: FYPO:0000002 ! cell phenotype intersection_of: inheres_in GO:0007010 created_by: midori creation_date: 2011-04-21T02:31:20Z [Term] id: FYPO:0000296 name: actin cytoskeleton organization phenotype def: "A cellular process phenotype that affects the organization of the actin cytoskeleton." [PomBase:mah] synonym: "actin cytoskeleton organisation phenotype" EXACT [PomBase:mah] is_a: FYPO:0000295 ! cytoskeleton organization phenotype intersection_of: FYPO:0000002 ! cell phenotype intersection_of: inheres_in GO:0030036 created_by: midori creation_date: 2011-04-21T02:31:20Z [Term] id: FYPO:0000297 name: microtubule cytoskeleton organization phenotype def: "A cellular process phenotype that affects the organization of the microtubule cytoskeleton." [PomBase:mah] synonym: "microtubule cytoskeleton organisation phenotype" EXACT [PomBase:mah] is_a: FYPO:0000295 ! cytoskeleton organization phenotype intersection_of: FYPO:0000002 ! cell phenotype intersection_of: inheres_in GO:0000226 created_by: midori creation_date: 2011-04-21T02:31:20Z [Term] id: FYPO:0000298 name: cellular response phenotype def: "A cellular process phenotype that affects a response to a stimulus." [PomBase:mah] is_a: FYPO:0000114 ! cellular process phenotype intersection_of: FYPO:0000002 ! cell phenotype intersection_of: inheres_in GO:0051716 created_by: midori creation_date: 2011-04-21T04:47:15Z [Term] id: FYPO:0000299 name: microcolony formation def: "A cell population phenotype in which a cell undergoes one or a few rounds of cell division before cells die, resulting in the formation a colony that contains only a few cells." [PomBase:mah] is_a: FYPO:0000003 ! cell population phenotype relationship: comprises_cells_with_phenotype FYPO:0000049 ! inviable created_by: mah79 creation_date: 2011-04-26T02:13:39Z [Term] id: FYPO:0000300 name: biological process phenotype def: "A phenotype that affects a biological process." [PomBase:mah] is_a: FYPO:0000001 ! phenotype intersection_of: FYPO:0000001 ! phenotype intersection_of: inheres_in GO:0008150 created_by: mah79 creation_date: 2011-04-26T02:25:13Z [Term] id: FYPO:0000301 name: mating phenotype def: "A biological process phenotype that affects conjugation." [PomBase:mah] synonym: "conjugation phenotype" EXACT [PomBase:mah] is_a: FYPO:0000300 ! biological process phenotype intersection_of: FYPO:0000001 ! phenotype intersection_of: inheres_in GO:0000747 created_by: mah79 creation_date: 2011-04-26T02:29:20Z [Term] id: FYPO:0000302 name: abnormal response to pheromone def: "A conjugation phenotype in which a cell's response to mating pheromone is abnormal." [PomBase:mah] synonym: "abnormal response to pheromone involved in conjugation with cellular fusion" EXACT [PomBase:mah] synonym: "defective response to pheromone" EXACT [PomBase:mah] is_a: FYPO:0000031 ! abnormal conjugation is_a: FYPO:0000298 ! cellular response phenotype intersection_of: PATO:0000001 intersection_of: inheres_in GO:0000749 intersection_of: qualifier PATO:0000460 created_by: mah79 creation_date: 2011-04-26T02:36:20Z [Term] id: FYPO:0000303 name: reduced conjugation frequency def: "A conjugation phenotype in which conjugation occurs less frequently than normal." [PomBase:mah] synonym: "decreased occurrence of conjugation" EXACT [PomBase:mah] synonym: "reduced conjugation efficiency" EXACT [PomBase:mah] synonym: "reduced zygote formation" RELATED [PomBase:mah] is_a: FYPO:0000031 ! abnormal conjugation intersection_of: PATO:0002052 intersection_of: inheres_in GO:0000747 created_by: mah79 creation_date: 2011-04-26T02:40:00Z [Term] id: FYPO:0000304 name: sensitive to stress def: "A phenotype in which cells show increased sensitivity to a stress." [PomBase:mah] is_a: FYPO:0000162 ! abnormal cellular response to stress intersection_of: PATO:0001551 intersection_of: inheres_in GO:0033554 created_by: mah79 creation_date: 2011-04-26T03:10:44Z [Term] id: FYPO:0000305 name: abnormal spore germination def: "A cellular process phenotype in which spore germination is abnormal." [PomBase:mah] is_a: FYPO:0000628 ! abnormal cellular process intersection_of: PATO:0000001 intersection_of: inheres_in GO:0009847 intersection_of: qualifier PATO:0000460 created_by: mah79 creation_date: 2011-04-27T11:47:04Z [Term] id: FYPO:0000306 name: spore germination abolished def: "A cellular process phenotype in which spore germination does not occur." [PomBase:mah] is_a: FYPO:0000305 ! abnormal spore germination intersection_of: PATO:0001508 intersection_of: inheres_in GO:0009847 created_by: mah79 creation_date: 2011-04-27T11:47:04Z [Term] id: FYPO:0000307 name: spore germination abolished, small spores def: "A cellular process phenotype in which spore germination does not occur, and spores are smaller than normal." [PomBase:mah] is_a: FYPO:0000309 ! spore germination abolished, abnormal spore morphology intersection_of: has_part FYPO:0000306 ! spore germination abolished intersection_of: has_part FYPO:0000346 ! small spores created_by: mah79 creation_date: 2011-04-27T11:47:04Z [Term] id: FYPO:0000308 name: spore germination abolished, swollen spores def: "A cellular process phenotype in which spore germination does not occur, and spores have a larger volume than normal." [PomBase:mah] is_a: FYPO:0000309 ! spore germination abolished, abnormal spore morphology is_a: FYPO:0000347 ! swollen spores intersection_of: has_part FYPO:0000306 ! spore germination abolished intersection_of: has_part FYPO:0000347 ! swollen spores created_by: mah79 creation_date: 2011-04-27T11:47:04Z [Term] id: FYPO:0000309 name: spore germination abolished, abnormal spore morphology def: "A cellular process phenotype in which spore germination does not occur, and spores have abnormal morphology." [PomBase:mah] synonym: "spore germination abolished, misshapen spores" EXACT [PomBase:mah] is_a: FYPO:0000306 ! spore germination abolished intersection_of: has_part FYPO:0000306 ! spore germination abolished intersection_of: has_part FYPO:0000348 ! abnormal spore morphology created_by: mah79 creation_date: 2011-04-27T11:47:04Z [Term] id: FYPO:0000310 name: inviable germinating spore with normal germ tube morphology def: "A phenotype in which a spore germinates to produce a normal germ tube, but does not go on to form a dividing cell." [PomBase:mah] is_a: FYPO:0000316 ! inviable germinating spore created_by: mah79 creation_date: 2011-04-27T11:47:04Z [Term] id: FYPO:0000311 name: inviable germinating spore with normal, unseptated germ tube morphology def: "A phenotype in which a spore germinates to produce a normal germ tube, but does not septate or go on to form a dividing cell." [PomBase:mah] is_a: FYPO:0000310 ! inviable germinating spore with normal germ tube morphology created_by: mah79 creation_date: 2011-04-27T11:47:04Z [Term] id: FYPO:0000312 name: inviable germinating spore with normal, septated germ tube morphology def: "A phenotype in which a spore germinates to produce a normal germ tube, and undergoes septation, but does not go on to form a dividing cell." [PomBase:mah] is_a: FYPO:0000310 ! inviable germinating spore with normal germ tube morphology created_by: mah79 creation_date: 2011-04-27T11:47:04Z [Term] id: FYPO:0000313 name: inviable germinating spore with abnormal germ tube morphology def: "A phenotype in which a spore germinates to produce a germ tube with abnormal morphology, and does not go on to form a dividing cell." [PomBase:mah] is_a: FYPO:0000287 ! abnormal subcellular structure is_a: FYPO:0000316 ! inviable germinating spore intersection_of: PATO:0000051 intersection_of: inheres_in GO:0032172 intersection_of: qualifier PATO:0000460 created_by: mah79 creation_date: 2011-04-27T11:47:04Z [Term] id: FYPO:0000314 name: inviable germinating spore with elongated germ tube def: "A phenotype in which a spore germinates to produce an elongated germ tube, and does not go on to form a dividing cell." [PomBase:mah] is_a: FYPO:0000017 ! elongated cells is_a: FYPO:0000313 ! inviable germinating spore with abnormal germ tube morphology intersection_of: PATO:0000573 intersection_of: inheres_in GO:0032172 created_by: mah79 creation_date: 2011-04-27T11:47:04Z [Term] id: FYPO:0000315 name: inviable germinating spore with elongated, septated germ tube def: "A phenotype in which a spore germinates to produce an elongated germ tube, and undergoes septation, but does not go on to form a dividing cell." [PomBase:mah] is_a: FYPO:0000313 ! inviable germinating spore with abnormal germ tube morphology created_by: mah79 creation_date: 2011-04-27T11:47:04Z [Term] id: FYPO:0000316 name: inviable germinating spore def: "A viability phenotype in which a spore germinates but fails to produce dividing cells that can survive under normal conditions." [PomBase:jh, PomBase:mah] is_a: FYPO:0000049 ! inviable created_by: mah79 creation_date: 2011-04-27T01:13:41Z [Term] id: FYPO:0000317 name: mixed population def: "A cell population phenotype in which a population contains cells with more than one phenotype, usually different morphologies." [PomBase:mah] is_a: FYPO:0000003 ! cell population phenotype created_by: mah79 creation_date: 2011-04-27T01:32:52Z [Term] id: FYPO:0000318 name: inviable mixed population including long cells def: "A mixed population phenotype in which a microcolony forms, and all cells in the population divide once upon spore germination but are inviable, and some cells are longer than normal." [PomBase:jh, PomBase:mah] synonym: "long low penetrance" EXACT [PomBase:jh, PomBase:vw] is_a: FYPO:0000299 ! microcolony formation is_a: FYPO:0000317 ! mixed population relationship: includes_cells_with_phenotype FYPO:0000017 ! elongated cells created_by: mah79 creation_date: 2011-04-27T04:18:16Z [Term] id: FYPO:0000319 name: inviable mixed population including spores and divided germinated spores def: "A mixed population phenotype in which all cells in a population are inviable, and the population includes a mixture of spores and germinated spores most of which go on to divide once or twice. Some germinated spores remain septated and do not complete cell division." [PomBase:jh, PomBase:mah] synonym: "put cut" RELATED [PomBase:jh] is_a: FYPO:0000317 ! mixed population relationship: comprises_cells_with_phenotype FYPO:0000049 ! inviable relationship: includes_cells_with_phenotype FYPO:0000306 ! spore germination abolished relationship: includes_cells_with_phenotype FYPO:0000320 ! inviable germinating spore, single cell division created_by: mah79 creation_date: 2011-04-27T04:20:40Z [Term] id: FYPO:0000320 name: inviable germinating spore, single cell division def: "A phenotype in which a spore germinates to produce a cell of normal morphology that undergoes a single round of cell division, and then dies." [PomBase:jh, PomBase:mah, PomBase:vw] is_a: FYPO:0000316 ! inviable germinating spore created_by: mah79 creation_date: 2011-04-27T04:25:13Z [Term] id: FYPO:0000321 name: inviable mixed population including spores and undivided germinated spores def: "A mixed population phenotype in which all cells in a population are inviable, and the population includes a mixture of ungerminated spores and germinated spores that fail to divide." [PomBase:jh, PomBase:mah] is_a: FYPO:0000317 ! mixed population relationship: comprises_cells_with_phenotype FYPO:0000049 ! inviable relationship: includes_cells_with_phenotype FYPO:0000316 ! inviable germinating spore created_by: mah79 creation_date: 2011-04-27T04:32:25Z [Term] id: FYPO:0000322 name: cut, septum dividing nucleus def: "A cut phenotype in which the septum forms and physically divides the nucleus into two parts." [PomBase:mah, PomBase:vw] is_a: FYPO:0000229 ! cut created_by: mah79 creation_date: 2011-04-27T05:16:50Z [Term] id: FYPO:0000323 name: cut, binucleate cell formation def: "A cut phenotype in which septum formation produces a cell containing two nuclei." [PomBase:mah, PomBase:vw] is_a: FYPO:0000229 ! cut created_by: mah79 creation_date: 2011-04-27T05:20:29Z [Term] id: FYPO:0000324 name: mitotic metaphase/anaphase transition delay alt_id: FYPO:0000393 def: "A cell cycle phenotype in which the onset of anaphase of the mitotic cell cycle takes place later than normal." [PomBase:mah] synonym: "cell cycle passage through the metaphase-anaphase transition: delayed" EXACT [SGD:phenotype_annotation] synonym: "delayed cell cycle passage through mitotic metaphase-anaphase transition" EXACT [] synonym: "mitotic cell cycle delay at metaphase/anaphase transition" EXACT [PomBase:mah] is_a: FYPO:0000059 ! abnormal mitotic cell cycle progression intersection_of: PATO:0001542 intersection_of: inheres_in GO:0007091 created_by: mah79 creation_date: 2011-05-09T04:36:10Z [Term] id: FYPO:0000325 name: abnormal attachment of spindle microtubules to kinetochore def: "A cellular process phenotype in which the attachment of spindle microtubules to the kinetochore during a mitotic or meiotic nuclear division is abnormal." [PomBase:mah] is_a: FYPO:0000145 ! regulation phenotype intersection_of: PATO:0000001 intersection_of: inheres_in GO:0051313 intersection_of: qualifier PATO:0000460 created_by: mah79 creation_date: 2011-05-11T01:50:15Z [Term] id: FYPO:0000326 name: abnormal sister chromatid biorientation def: "A cellular process phenotype in which the stable attachment of sister chromatids to microtubules emanating from opposite spindle poles is abnormal." [PomBase:mah] is_a: FYPO:0000325 ! abnormal attachment of spindle microtubules to kinetochore intersection_of: PATO:0000001 intersection_of: inheres_in GO:0031134 intersection_of: qualifier PATO:0000460 created_by: mah79 creation_date: 2011-05-11T01:51:05Z [Term] id: FYPO:0000327 name: resistance to trichostatin A def: "An increased chemical resistance phenotype in which cells grow in the presence of a higher concentration of trichostatin A than normal." [PomBase:mah] synonym: "resistant to trichostatin A" EXACT [PomBase:mah] is_a: FYPO:0000126 ! increased resistance to chemical intersection_of: PATO:0001552 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:46024 created_by: mah79 creation_date: 2011-05-11T02:55:53Z [Term] id: FYPO:0000328 name: abnormal protein metabolic process def: "A cellular process phenotype that affects protein metabolism in the cell." [PomBase:mah] synonym: "abnormal cellular protein metabolic process" EXACT [PomBase:mah] is_a: FYPO:0000140 ! cellular metabolism phenotype intersection_of: PATO:0000001 intersection_of: inheres_in GO:0044267 intersection_of: qualifier PATO:0000460 created_by: mah79 creation_date: 2011-05-11T03:39:46Z [Term] id: FYPO:0000329 name: abnormal protein modification def: "A cellular process phenotype in which protein modification is abnormal." [PomBase:mah] synonym: "abnormal protein/peptide modification" EXACT [PomBase:mah] synonym: "protein/peptide modification: abnormal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000328 ! abnormal protein metabolic process intersection_of: PATO:0000001 intersection_of: inheres_in GO:0006464 intersection_of: qualifier PATO:0000460 created_by: mah79 creation_date: 2011-05-11T03:40:46Z [Term] id: FYPO:0000330 name: abnormal histone modification def: "A cellular process phenotype that affects histone modification." [PomBase:mah] is_a: FYPO:0000329 ! abnormal protein modification intersection_of: PATO:0000001 intersection_of: inheres_in GO:0016570 intersection_of: qualifier PATO:0000460 created_by: mah79 creation_date: 2011-05-11T03:41:32Z [Term] id: FYPO:0000331 name: decreased histone acetylation def: "A cellular process phenotype in which histone acetylation occurs to a lower extent than normal." [PomBase:mah] synonym: "reduced histone acetylation" EXACT [PomBase:mah] is_a: FYPO:0000456 ! abnormal histone acetylation intersection_of: inheres_in GO:0016573 intersection_of: qualifier PATO:0002052 created_by: mah79 creation_date: 2011-05-11T03:42:20Z [Term] id: FYPO:0000332 name: increased histone acetylation def: "A cellular process phenotype in which histone acetylation occurs to a greater extent than normal." [PomBase:mah] is_a: FYPO:0000456 ! abnormal histone acetylation intersection_of: inheres_in GO:0016573 intersection_of: qualifier PATO:0002051 created_by: mah79 creation_date: 2011-05-11T03:43:21Z [Term] id: FYPO:0000333 name: mitotic G1/S transition delay alt_id: FYPO:0000396 def: "A cell cycle phenotype in which the G1/S transition of the mitotic cell cycle takes place later than normal." [PomBase:mah] synonym: "cell cycle progression through the G1/S phase transition: delayed" EXACT [SGD:phenotype_annotation] synonym: "delayed cell cycle progression through mitotic G1/S phase transition" EXACT [] synonym: "mitotic cell cycle delay at G1/S transition" EXACT [PomBase:mah] is_a: FYPO:0000394 ! abnormal cell cycle progression through mitotic G1/S phase transition is_a: FYPO:0000409 ! delayed cell cycle progression intersection_of: PATO:0000502 intersection_of: inheres_in GO:0000082 intersection_of: qualifier PATO:0001542 created_by: mah79 creation_date: 2011-05-11T04:08:59Z [Term] id: FYPO:0000334 name: cellular component organization phenotype def: "A phenotype that affects a process of cellular component organization that occurs at the cellular level." [PomBase:mah] synonym: "cellular component organisation phenotype" EXACT [PomBase:mah] synonym: "cellular component organization phenotype at cellular level" EXACT [PomBase:mah] is_a: FYPO:0000114 ! cellular process phenotype intersection_of: FYPO:0000002 ! cell phenotype intersection_of: inheres_in GO:0071842 created_by: midori creation_date: 2011-06-03T11:55:29Z [Term] id: FYPO:0000335 name: abnormal cellular component organization def: "A cellular process phenotype in which any process of cellular component organization at the cellular level is abnormal." [PomBase:mah] synonym: "abnormal cellular component organisation" EXACT [PomBase:mah] synonym: "abnormal cellular component organization at cellular level" EXACT [PomBase:mah] is_a: FYPO:0000334 ! cellular component organization phenotype intersection_of: PATO:0000001 intersection_of: inheres_in GO:0071842 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-06-03T11:57:14Z [Term] id: FYPO:0000336 name: abnormal cellular component assembly def: "A cellular process phenotype in which any process of cellular component assembly at the cellular level is abnormal." [PomBase:mah] synonym: "abnormal cellular component assembly at cellular level" EXACT [PomBase:mah] is_a: FYPO:0000335 ! abnormal cellular component organization intersection_of: PATO:0000001 intersection_of: inheres_in GO:0071844 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-06-03T12:00:35Z [Term] id: FYPO:0000337 name: abnormal mitosis def: "A cellular process phenotype in which mitosis is abnormal." [PomBase:mah] is_a: FYPO:0000607 ! abnormal mitotic M phase progression intersection_of: PATO:0000001 intersection_of: inheres_in GO:0007067 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-06-03T12:29:47Z [Term] id: FYPO:0000338 name: abnormal mitotic spindle alt_id: FYPO:0000277 def: "A cellular structure phenotype in which the structure of the mitotic spindle is abnormal." [PomBase:mah] synonym: "mitotic spindle defects" EXACT [PomBase:mah] synonym: "spindle polarity defects" RELATED [PomBase:mah] is_a: FYPO:0000120 ! abnormal spindle intersection_of: PATO:0000001 intersection_of: exists_during GO:0007067 intersection_of: inheres_in GO:0072686 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-06-03T01:43:41Z [Term] id: FYPO:0000339 name: abnormal septum site selection def: "A septation phenotype in which a cell forms a septum in an abnormal location." [PomBase:mah] synonym: "abnormal barrier septum site selection" EXACT [PomBase:mah] synonym: "abnormal septum localization" RELATED [PomBase:mah] synonym: "abnormal septum positioning" EXACT [PomBase:mah] is_a: FYPO:0000117 ! abnormal septation intersection_of: PATO:0000001 intersection_of: inheres_in GO:0000918 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-06-13T02:57:21Z [Term] id: FYPO:0000340 name: haploinsufficient def: "A cell phenotype in which a single functional copy of a gene does not provide sufficient normal function in a diploid cell." [PomBase:mah] is_a: FYPO:0000002 ! cell phenotype created_by: midori creation_date: 2011-06-13T04:23:38Z [Term] id: FYPO:0000341 name: haplosufficient def: "A cell phenotype in which a single functional copy of a gene provides sufficient normal function in a diploid cell." [PomBase:mah] synonym: "haploproficient" EXACT [PomBase:mah] is_a: FYPO:0000002 ! cell phenotype created_by: midori creation_date: 2011-06-13T04:25:07Z [Term] id: FYPO:0000342 name: decreased cellular respiration def: "A cellular process phenotype in which the occurrence of cellular respiration is decreased." [PomBase:mah] synonym: "decreased respiration" BROAD [PomBase:mah] synonym: "decreased respiratory metabolism" EXACT [PomBase:mah] synonym: "respiratory metabolism: decreased" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000078 ! abnormal cellular respiration intersection_of: PATO:0002052 intersection_of: inheres_in GO:0045333 created_by: midori creation_date: 2011-06-14T04:25:19Z [Term] id: FYPO:0000343 name: increased hydrogen sulfide biosynthesis def: "A cellular metabolism phenotype in which the biosynthesis of hydrogen sulfide is increased." [PomBase:mah] synonym: "increased H2S biosynthesis " EXACT [PomBase:mah] is_a: FYPO:0000140 ! cellular metabolism phenotype intersection_of: inheres_in GO:0070814 intersection_of: qualifier PATO:0002052 created_by: midori creation_date: 2011-06-14T04:44:26Z [Term] id: FYPO:0000344 name: enlarged nucleus def: "A cellular structure phenotype in which the nucleus is larger than normal." [PomBase:mah] is_a: FYPO:0000062 ! abnormal nuclear morphology intersection_of: PATO:0000586 intersection_of: inheres_in GO:0005634 created_by: midori creation_date: 2011-06-15T03:45:06Z [Term] id: FYPO:0000345 name: abnormal protein export from nucleus def: "A transport phenotype in which the export of protein from the nucleus is abnormal." [PomBase:mah] is_a: FYPO:0000215 ! abnormal intracellular protein transport is_a: FYPO:0000506 ! abnormal nuclear export intersection_of: PATO:0000001 intersection_of: inheres_in GO:0006611 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-06-15T05:11:00Z [Term] id: FYPO:0000346 name: small spores def: "A cell morphology phenotype in which spores have an abnormally low volume." [PomBase:mah] is_a: FYPO:0000023 ! small cells is_a: FYPO:0000348 ! abnormal spore morphology intersection_of: PATO:0000596 intersection_of: inheres_in CL:0000596 created_by: midori creation_date: 2011-07-07T03:26:17Z [Term] id: FYPO:0000347 name: swollen spores def: "A cell morphology phenotype in which a spore has a larger volume than normal." [PomBase:mah] is_a: FYPO:0000025 ! swollen cells is_a: FYPO:0000348 ! abnormal spore morphology intersection_of: PATO:0000595 intersection_of: inheres_in CL:0000596 created_by: midori creation_date: 2011-07-07T03:34:09Z [Term] id: FYPO:0000348 name: abnormal spore morphology def: "A cell phenotype characterized by altered spore morphology." [PomBase:mah] is_a: FYPO:0000005 ! abnormal cell morphology intersection_of: PATO:0000051 intersection_of: inheres_in CL:0000596 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-07-07T03:35:26Z [Term] id: FYPO:0000349 name: abnormal Golgi morphology def: "A cellular structure phenotype in which the morphology of the Golgi apparatus is abnormal." [PomBase:mah] synonym: "Golgi morphology: abnormal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000287 ! abnormal subcellular structure intersection_of: PATO:0001617 intersection_of: inheres_in GO:0005794 created_by: midori creation_date: 2011-07-14T05:04:23Z [Term] id: FYPO:0000350 name: abnormal actin cytoskeleton morphology def: "A cellular structure phenotype in which the morphology of the actin cytoskeleton is abnormal." [PomBase:mah] synonym: "actin cytoskeleton morphology: abnormal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000352 ! abnormal cytoskeleton morphology intersection_of: PATO:0001617 intersection_of: inheres_in GO:0015629 created_by: midori creation_date: 2011-07-14T05:04:23Z [Term] id: FYPO:0000351 name: abnormal cell wall morphology def: "A cellular structure phenotype in which the morphology of the fungal-type cell wall is abnormal." [PomBase:mah] synonym: "cell wall morphology: abnormal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000027 ! abnormal cell wall intersection_of: PATO:0001617 intersection_of: inheres_in GO:0009277 created_by: midori creation_date: 2011-07-14T05:04:23Z [Term] id: FYPO:0000352 name: abnormal cytoskeleton morphology def: "A cellular structure phenotype in which the morphology of the cytoskeleton is abnormal." [PomBase:mah] synonym: "cytoskeleton morphology: abnormal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000287 ! abnormal subcellular structure intersection_of: PATO:0001617 intersection_of: inheres_in GO:0005856 created_by: midori creation_date: 2011-07-14T05:04:23Z [Term] id: FYPO:0000353 name: abnormal endomembrane system morphology def: "A cellular structure phenotype in which the morphology of the endomembrane system is abnormal." [PomBase:mah] synonym: "endomembrane system morphology: abnormal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000287 ! abnormal subcellular structure intersection_of: PATO:0001617 intersection_of: inheres_in GO:0012505 created_by: midori creation_date: 2011-07-14T05:04:23Z [Term] id: FYPO:0000354 name: abnormal endoplasmic reticulum morphology def: "A cellular structure phenotype in which the morphology of the endoplasmic reticulum is abnormal." [PomBase:mah] synonym: "endoplasmic reticulum morphology: abnormal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000287 ! abnormal subcellular structure intersection_of: PATO:0001617 intersection_of: inheres_in GO:0005783 created_by: midori creation_date: 2011-07-14T05:04:23Z [Term] id: FYPO:0000355 name: normal endoplasmic reticulum morphology def: "A cellular structure phenotype in which the morphology of the endoplasmic reticulum is normal." [PomBase:mah] synonym: "endoplasmic reticulum morphology: normal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000136 ! cellular structure phenotype is_a: FYPO:0000257 ! normal phenotype intersection_of: PATO:0000001 intersection_of: inheres_in GO:0005783 intersection_of: qualifier PATO:0000461 created_by: midori creation_date: 2011-07-14T05:04:23Z [Term] id: FYPO:0000356 name: abnormal lipid particle morphology def: "A cellular structure phenotype in which the morphology of lipid particles is abnormal." [PomBase:mah] synonym: "lipid particle morphology: abnormal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000287 ! abnormal subcellular structure intersection_of: PATO:0001617 intersection_of: inheres_in GO:0005811 created_by: midori creation_date: 2011-07-14T05:04:23Z [Term] id: FYPO:0000357 name: abnormal shmoo morphology def: "A cellular structure phenotype in which the morphology of the mating projection is abnormal." [PomBase:mah] synonym: "abnormal mating projection morphology" EXACT [PomBase:mah] synonym: "mating projection morphology: abnormal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000287 ! abnormal subcellular structure intersection_of: PATO:0001617 intersection_of: inheres_in GO:0005937 created_by: midori creation_date: 2011-07-14T05:04:23Z [Term] id: FYPO:0000358 name: mating projection absent def: "A cellular structure phenotype in which cells do not form mating projections." [PomBase:mah] synonym: "absent mating projection morphology" EXACT [PomBase:mah] synonym: "mating projection morphology: absent" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000005 ! abnormal cell morphology intersection_of: PATO:0002000 intersection_of: inheres_in GO:0005937 created_by: midori creation_date: 2011-07-14T05:04:23Z [Term] id: FYPO:0000359 name: abnormal mitochondrial morphology def: "A cellular structure phenotype in which the morphology of the mitochondrion is abnormal." [PomBase:mah] synonym: "mitochondrial morphology: abnormal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000287 ! abnormal subcellular structure intersection_of: PATO:0001617 intersection_of: inheres_in GO:0005739 created_by: midori creation_date: 2011-07-14T05:04:23Z [Term] id: FYPO:0000360 name: abnormal RNA localization def: "A cellular process phenotype in which RNA localization is abnormal." [PomBase:mah] synonym: "abnormal RNA localisation" EXACT [PomBase:mah] synonym: "RNA localization: abnormal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000628 ! abnormal cellular process intersection_of: PATO:0000001 intersection_of: inheres_in GO:0006403 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-07-14T06:06:09Z [Term] id: FYPO:0000361 name: abnormal nucleolar morphology def: "A cellular structure phenotype in which the morphology of the nucleolus is abnormal." [PomBase:mah] synonym: "nucleolar morphology: abnormal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000287 ! abnormal subcellular structure intersection_of: PATO:0001617 intersection_of: inheres_in GO:0005730 created_by: midori creation_date: 2011-07-14T05:04:23Z [Term] id: FYPO:0000362 name: abnormal peroxisomal morphology def: "A cellular structure phenotype in which the morphology of the peroxisome is abnormal." [PomBase:mah] synonym: "peroxisomal morphology: abnormal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000287 ! abnormal subcellular structure intersection_of: PATO:0001617 intersection_of: inheres_in GO:0005777 created_by: midori creation_date: 2011-07-14T05:04:23Z [Term] id: FYPO:0000363 name: peroxisomes absent def: "A cellular structure phenotype in which cells do not contain peroxisomes." [PomBase:mah] synonym: "absent peroxisomal morphology" EXACT [PomBase:mah] synonym: "peroxisomal morphology: absent" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000287 ! abnormal subcellular structure intersection_of: PATO:0002000 intersection_of: inheres_in GO:0005777 created_by: midori creation_date: 2011-07-14T05:04:23Z [Term] id: FYPO:0000364 name: abnormal plasma membrane morphology def: "A cellular structure phenotype in which the morphology of the plasma membrane is abnormal." [PomBase:mah] synonym: "plasma membrane morphology: abnormal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000287 ! abnormal subcellular structure intersection_of: PATO:0001617 intersection_of: inheres_in GO:0005886 created_by: midori creation_date: 2011-07-14T05:04:23Z [Term] id: FYPO:0000365 name: small nucleus def: "A cellular structure phenotype in which the nucleus is smaller than normal." [PomBase:mah] synonym: "size of nucleus: decreased" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000062 ! abnormal nuclear morphology intersection_of: PATO:0000587 intersection_of: inheres_in GO:0005634 created_by: midori creation_date: 2011-07-14T05:04:23Z [Term] id: FYPO:0000366 name: decreased RNA localization def: "A cellular process phenotype in which the occurrence of RNA localization is decreased." [PomBase:mah] synonym: "decreased RNA localisation" EXACT [PomBase:mah] synonym: "RNA localization: decreased" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000360 ! abnormal RNA localization intersection_of: PATO:0002052 intersection_of: inheres_in GO:0006403 created_by: midori creation_date: 2011-07-14T06:06:09Z [Term] id: FYPO:0000368 name: abnormal vacuolar morphology def: "A cellular structure phenotype in which the morphology of the fungal-type vacuole is abnormal." [PomBase:mah] synonym: "vacuolar morphology: abnormal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000287 ! abnormal subcellular structure intersection_of: PATO:0001617 intersection_of: inheres_in GO:0000324 created_by: midori creation_date: 2011-07-14T05:04:23Z [Term] id: FYPO:0000369 name: vacuoles absent def: "A cellular structure phenotype in which cells do not contain vacuoles." [PomBase:mah] synonym: "absent vacuolar morphology" EXACT [PomBase:mah] synonym: "vacuolar morphology: absent" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000287 ! abnormal subcellular structure intersection_of: PATO:0002000 intersection_of: inheres_in GO:0000324 created_by: midori creation_date: 2011-07-14T05:04:23Z [Term] id: FYPO:0000370 name: abnormal RNA modification def: "A cellular process phenotype in which RNA modification is abnormal." [PomBase:mah] synonym: "RNA modification: abnormal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000294 ! RNA metabolism phenotype intersection_of: PATO:0000001 intersection_of: inheres_in GO:0009451 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-07-14T06:06:09Z [Term] id: FYPO:0000371 name: RNA modification abolished def: "A cellular process phenotype in which RNA modification is abolished." [PomBase:mah] synonym: "absent RNA modification" EXACT [PomBase:mah] synonym: "RNA modification: absent" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000370 ! abnormal RNA modification intersection_of: PATO:0001508 intersection_of: inheres_in GO:0009451 created_by: midori creation_date: 2011-07-14T06:06:09Z [Term] id: FYPO:0000372 name: decreased RNA modification def: "A cellular process phenotype in which the occurrence of RNA modification is decreased." [PomBase:mah] synonym: "RNA modification: decreased" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000370 ! abnormal RNA modification intersection_of: PATO:0002052 intersection_of: inheres_in GO:0009451 created_by: midori creation_date: 2011-07-14T06:06:09Z [Term] id: FYPO:0000373 name: decreased rate of RNA modification def: "A cellular process phenotype in which the rate of RNA modification is decreased." [PomBase:mah] synonym: "RNA modification: decreased rate" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000370 ! abnormal RNA modification intersection_of: PATO:0000911 intersection_of: inheres_in GO:0009451 created_by: midori creation_date: 2011-07-14T06:06:09Z [Term] id: FYPO:0000374 name: increased RNA modification def: "A cellular process phenotype in which the occurrence of RNA modification is increased." [PomBase:mah] synonym: "RNA modification: increased" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000370 ! abnormal RNA modification intersection_of: PATO:0002051 intersection_of: inheres_in GO:0009451 created_by: midori creation_date: 2011-07-14T06:06:09Z [Term] id: FYPO:0000375 name: apoptosis abolished def: "A cellular process phenotype in which apoptosis is abolished." [PomBase:mah] synonym: "absent apoptosis" EXACT [PomBase:mah] synonym: "apoptosis: absent" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000629 ! abnormal apoptosis intersection_of: PATO:0001508 intersection_of: inheres_in GO:0006915 created_by: midori creation_date: 2011-07-14T06:06:09Z [Term] id: FYPO:0000376 name: decreased apoptosis def: "A cellular process phenotype in which the occurrence of apoptosis is decreased." [PomBase:mah] synonym: "apoptosis: decreased" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000629 ! abnormal apoptosis intersection_of: PATO:0002052 intersection_of: inheres_in GO:0006915 created_by: midori creation_date: 2011-07-14T06:06:09Z [Term] id: FYPO:0000377 name: increased apoptosis def: "A cellular process phenotype in which the occurrence of apoptosis is increased." [PomBase:mah] synonym: "apoptosis: increased" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000629 ! abnormal apoptosis intersection_of: PATO:0002051 intersection_of: inheres_in GO:0006915 created_by: midori creation_date: 2011-07-14T06:06:09Z [Term] id: FYPO:0000378 name: normal apoptosis def: "A cellular process phenotype in which apoptosis is normal." [PomBase:mah] synonym: "apoptosis: normal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000627 ! normal cellular process intersection_of: PATO:0000001 intersection_of: inheres_in GO:0006915 intersection_of: qualifier PATO:0000461 created_by: midori creation_date: 2011-07-14T06:06:09Z [Term] id: FYPO:0000380 name: autophagy abolished def: "A cellular process phenotype in which autophagy is abolished." [PomBase:mah] synonym: "absent autophagy" EXACT [PomBase:mah] synonym: "autophagy: absent" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000163 ! abnormal autophagy intersection_of: PATO:0001508 intersection_of: inheres_in GO:0006914 created_by: midori creation_date: 2011-07-14T06:06:09Z [Term] id: FYPO:0000381 name: decreased autophagy def: "A cellular process phenotype in which the occurrence of autophagy is decreased." [PomBase:mah] synonym: "autophagy: decreased" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000163 ! abnormal autophagy intersection_of: PATO:0002052 intersection_of: inheres_in GO:0006914 created_by: midori creation_date: 2011-07-14T06:06:09Z [Term] id: FYPO:0000382 name: decreased rate of autophagy def: "A cellular process phenotype in which the rate of autophagy is decreased." [PomBase:mah] synonym: "autophagy: decreased rate" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000163 ! abnormal autophagy intersection_of: PATO:0000911 intersection_of: inheres_in GO:0006914 created_by: midori creation_date: 2011-07-14T06:06:09Z [Term] id: FYPO:0000383 name: delayed autophagy def: "A cellular process phenotype in which autophagy is delayed." [PomBase:mah] synonym: "autophagy: delayed" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000163 ! abnormal autophagy intersection_of: PATO:0000502 intersection_of: inheres_in GO:0006914 created_by: midori creation_date: 2011-07-14T06:06:09Z [Term] id: FYPO:0000384 name: increased autophagy def: "A cellular process phenotype in which the occurrence of autophagy is increased." [PomBase:mah] synonym: "autophagy: increased" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000163 ! abnormal autophagy intersection_of: PATO:0002051 intersection_of: inheres_in GO:0006914 created_by: midori creation_date: 2011-07-14T06:06:09Z [Term] id: FYPO:0000385 name: normal autophagy def: "A cellular process phenotype in which autophagy is normal." [PomBase:mah] synonym: "autophagy: normal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000627 ! normal cellular process intersection_of: PATO:0000001 intersection_of: inheres_in GO:0006914 intersection_of: qualifier PATO:0000461 created_by: midori creation_date: 2011-07-14T06:06:09Z [Term] id: FYPO:0000386 name: biofilm formation abolished def: "A cellular process phenotype in which biofilm formation is abolished." [PomBase:mah] synonym: "absent biofilm formation" EXACT [PomBase:mah] synonym: "biofilm formation: absent" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000630 ! abnormal biofilm formation intersection_of: PATO:0001508 intersection_of: inheres_in GO:0042710 created_by: midori creation_date: 2011-07-14T06:06:09Z [Term] id: FYPO:0000387 name: decreased biofilm formation def: "A cellular process phenotype in which the occurrence of biofilm formation is decreased." [PomBase:mah] synonym: "biofilm formation: decreased" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000630 ! abnormal biofilm formation intersection_of: PATO:0002052 intersection_of: inheres_in GO:0042710 created_by: midori creation_date: 2011-07-14T06:06:09Z [Term] id: FYPO:0000388 name: increased biofilm formation def: "A cellular process phenotype in which the occurrence of biofilm formation is increased." [PomBase:mah] synonym: "biofilm formation: increased" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000628 ! abnormal cellular process intersection_of: PATO:0002051 intersection_of: inheres_in GO:0042710 created_by: midori creation_date: 2011-07-14T06:06:09Z [Term] id: FYPO:0000389 name: mitotic cell cycle arrest at START def: "A cellular process phenotype in which traversing the start control point of the mitotic cell cycle is arrested." [PomBase:mah] synonym: "cell cycle passage through START: arrested" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000148 ! abnormal regulation of mitotic cell cycle is_a: FYPO:0000407 ! cell cycle arrest intersection_of: PATO:0000297 intersection_of: inheres_in GO:0007089 created_by: midori creation_date: 2011-07-14T06:06:09Z [Term] id: FYPO:0000390 name: increased rate of passage through START of mitotic cell cycle def: "A cellular process phenotype in which the rate of traversing the start control point of the mitotic cell cycle is increased." [PomBase:mah] synonym: "cell cycle passage through START: increased rate" EXACT [SGD:phenotype_annotation] synonym: "increased rate of mitotic cell cycle passage through START" EXACT [PomBase:mah] is_a: FYPO:0000148 ! abnormal regulation of mitotic cell cycle is_a: FYPO:0000410 ! increased rate of cell cycle progression intersection_of: PATO:0000912 intersection_of: inheres_in GO:0007089 created_by: midori creation_date: 2011-07-14T06:06:09Z [Term] id: FYPO:0000391 name: normal passage through START of mitotic cell cycle def: "A cellular process phenotype in which traversing the start control point of the mitotic cell cycle is normal." [PomBase:mah] synonym: "cell cycle passage through START: normal" EXACT [SGD:phenotype_annotation] synonym: "normal mitotic cell cycle passage through START" EXACT [PomBase:mah] is_a: FYPO:0000411 ! normal cell cycle progression intersection_of: PATO:0000001 intersection_of: inheres_in GO:0007089 intersection_of: qualifier PATO:0000461 created_by: midori creation_date: 2011-07-14T06:06:09Z [Term] id: FYPO:0000392 name: cell cycle arrest at mitotic metaphase/anaphase transition def: "A cellular process phenotype in which progression through the mitotic cell cycle is arrested at the metaphase/anaphase transition." [PomBase:mah] synonym: "cell cycle passage through the metaphase-anaphase transition: arrested" EXACT [SGD:phenotype_annotation] synonym: "mitotic metaphase/anaphase arrest" EXACT [PomBase:mah] is_a: FYPO:0000407 ! cell cycle arrest is_a: FYPO:0000502 ! arrested mitotic cell cycle intersection_of: PATO:0000297 intersection_of: inheres_in GO:0007091 created_by: midori creation_date: 2011-07-14T06:06:09Z [Term] id: FYPO:0000394 name: abnormal cell cycle progression through mitotic G1/S phase transition def: "A cellular process phenotype in which the G1/S transition of the mitotic cell cycle is abnormal." [PomBase:mah] synonym: "cell cycle progression through the G1/S phase transition: abnormal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000059 ! abnormal mitotic cell cycle progression intersection_of: PATO:0000001 intersection_of: inheres_in GO:0000082 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-07-14T06:06:09Z [Term] id: FYPO:0000395 name: mitotic cell cycle arrest at G1/S phase transition def: "A cellular process phenotype in which progression through the mitotic cell cycle is arrested at the G1/S transition." [PomBase:mah] synonym: "cell cycle progression through the G1/S phase transition: arrested" EXACT [SGD:phenotype_annotation] synonym: "mitotic G1/S phase arrest" EXACT [PomBase:mah] is_a: FYPO:0000394 ! abnormal cell cycle progression through mitotic G1/S phase transition is_a: FYPO:0000407 ! cell cycle arrest is_a: FYPO:0000502 ! arrested mitotic cell cycle intersection_of: PATO:0000297 intersection_of: inheres_in GO:0000082 created_by: midori creation_date: 2011-07-14T06:06:09Z [Term] id: FYPO:0000397 name: increased rate of cell cycle progression through mitotic G1/S phase transition def: "A cellular process phenotype in which the rate of progression through the G1/S transition of the mitotic cell cycle is increased." [PomBase:mah] synonym: "cell cycle progression through the G1/S phase transition: increased rate" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000394 ! abnormal cell cycle progression through mitotic G1/S phase transition is_a: FYPO:0000410 ! increased rate of cell cycle progression intersection_of: PATO:0000912 intersection_of: inheres_in GO:0000082 created_by: midori creation_date: 2011-07-14T06:06:09Z [Term] id: FYPO:0000398 name: premature cell cycle progression through mitotic G1/S phase transition def: "A cellular process phenotype in which progression through the G1/S transition of the mitotic cell cycle is premature." [PomBase:mah] synonym: "cell cycle progression through the G1/S phase transition: premature" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000394 ! abnormal cell cycle progression through mitotic G1/S phase transition intersection_of: PATO:0000694 intersection_of: inheres_in GO:0000082 created_by: midori creation_date: 2011-07-14T06:45:37Z [Term] id: FYPO:0000399 name: abnormal cell cycle progression through mitotic G2/M phase transition def: "A cellular process phenotype in which the G2/M transition of the mitotic cell cycle is abnormal." [PomBase:mah] synonym: "cell cycle progression through the G2/M phase transition: abnormal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000059 ! abnormal mitotic cell cycle progression intersection_of: PATO:0000001 intersection_of: inheres_in GO:0000086 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-07-14T06:45:37Z [Term] id: FYPO:0000400 name: cell cycle arrest at mitotic G2/M phase transition def: "A cellular process phenotype in which progression through the mitotic cell cycle is arrested at the G2/M transition." [PomBase:mah] synonym: "cell cycle progression through the G2/M phase transition: arrested" EXACT [SGD:phenotype_annotation] synonym: "mitotic G2/M phase arrest" EXACT [PomBase:mah] is_a: FYPO:0000399 ! abnormal cell cycle progression through mitotic G2/M phase transition is_a: FYPO:0000407 ! cell cycle arrest is_a: FYPO:0000502 ! arrested mitotic cell cycle intersection_of: PATO:0000297 intersection_of: inheres_in GO:0000086 created_by: midori creation_date: 2011-07-14T06:45:37Z [Term] id: FYPO:0000402 name: increased cell cycle progression through mitotic G2/M phase transition def: "A cellular process phenotype in which the occurrence of progression through the G2/M transition of the mitotic cell cycle is increased." [PomBase:mah] synonym: "cell cycle progression through the G2/M phase transition: increased" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000399 ! abnormal cell cycle progression through mitotic G2/M phase transition intersection_of: PATO:0002051 intersection_of: inheres_in GO:0000086 created_by: midori creation_date: 2011-07-14T06:45:37Z [Term] id: FYPO:0000403 name: increased duration of cell cycle progression through mitotic G2/M phase transition def: "A cellular process phenotype in which the duration of progression through the G2/M transition of the mitotic cell cycle is increased." [PomBase:mah] synonym: "cell cycle progression through the G2/M phase transition: increased duration" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000399 ! abnormal cell cycle progression through mitotic G2/M phase transition intersection_of: PATO:0000498 intersection_of: inheres_in GO:0000086 created_by: midori creation_date: 2011-07-14T06:45:37Z [Term] id: FYPO:0000404 name: increased rate of cell cycle progression through mitotic G2/M phase transition def: "A cellular process phenotype in which the rate of progression through the G2/M transition of the mitotic cell cycle is increased." [PomBase:mah] synonym: "cell cycle progression through the G2/M phase transition: increased rate" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000399 ! abnormal cell cycle progression through mitotic G2/M phase transition is_a: FYPO:0000410 ! increased rate of cell cycle progression intersection_of: PATO:0000912 intersection_of: inheres_in GO:0000086 created_by: midori creation_date: 2011-07-14T06:45:37Z [Term] id: FYPO:0000405 name: normal cell cycle progression through mitotic G2/M phase transition def: "A cellular process phenotype in which the G2/M transition of the mitotic cell cycle is normal." [PomBase:mah] synonym: "cell cycle progression through the G2/M phase transition: normal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000411 ! normal cell cycle progression intersection_of: PATO:0000001 intersection_of: inheres_in GO:0000086 intersection_of: qualifier PATO:0000461 created_by: midori creation_date: 2011-07-14T06:45:37Z [Term] id: FYPO:0000407 name: cell cycle arrest def: "A cellular process phenotype in which cell cycle progression is arrested." [PomBase:mah] comment: Note that this term should be used only for cell cycle arrest that occurs in mutants. For phenotypes affecting the G1 cell cycle that normally occurs in response to mating pheromone, see 'abnormal cell cycle arrest in response to pheromone' (FYPO:0000530) and its child terms. synonym: "arrested cell cycle progression" EXACT [PomBase:mah] synonym: "cell cycle progression: arrested" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000011 ! abnormal cell cycle progression intersection_of: PATO:0000297 intersection_of: inheres_in GO:0007049 created_by: midori creation_date: 2011-07-14T06:45:37Z [Term] id: FYPO:0000408 name: decreased rate of cell cycle progression def: "A cellular process phenotype in which the rate of cell cycle progression is decreased." [PomBase:mah] synonym: "cell cycle progression: decreased rate" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000011 ! abnormal cell cycle progression intersection_of: PATO:0000911 intersection_of: inheres_in GO:0007049 created_by: midori creation_date: 2011-07-14T06:45:37Z [Term] id: FYPO:0000409 name: delayed cell cycle progression def: "A cellular process phenotype in which cell cycle progression is delayed." [PomBase:mah] synonym: "cell cycle progression: delayed" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000011 ! abnormal cell cycle progression intersection_of: PATO:0000502 intersection_of: inheres_in GO:0007049 created_by: midori creation_date: 2011-07-14T06:45:37Z [Term] id: FYPO:0000410 name: increased rate of cell cycle progression def: "A cellular process phenotype in which the rate of cell cycle progression is increased." [PomBase:mah] synonym: "cell cycle progression: increased rate" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000011 ! abnormal cell cycle progression intersection_of: PATO:0000912 intersection_of: inheres_in GO:0007049 created_by: midori creation_date: 2011-07-14T06:45:37Z [Term] id: FYPO:0000411 name: normal cell cycle progression def: "A cellular process phenotype in which cell cycle progression is normal." [PomBase:mah] synonym: "cell cycle progression: normal" EXACT [SGD:phenotype_annotation] synonym: "normal cell-division cycle" EXACT [GO:0007049, PomBase:mah] is_a: FYPO:0000627 ! normal cellular process intersection_of: PATO:0000001 intersection_of: inheres_in GO:0007049 intersection_of: qualifier PATO:0000461 created_by: midori creation_date: 2011-07-14T06:45:37Z [Term] id: FYPO:0000412 name: abnormal cell fusion def: "A cellular process phenotype in which plasma membrane fusion is abnormal." [PomBase:mah] synonym: "cell fusion: abnormal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000628 ! abnormal cellular process intersection_of: PATO:0000001 intersection_of: inheres_in GO:0045026 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-07-14T06:45:37Z [Term] id: FYPO:0000413 name: cell fusion abolished def: "A cellular process phenotype in which plasma membrane fusion is abolished." [PomBase:mah] synonym: "absent cell fusion" EXACT [PomBase:mah] synonym: "cell fusion: absent" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000412 ! abnormal cell fusion intersection_of: PATO:0001508 intersection_of: inheres_in GO:0045026 created_by: midori creation_date: 2011-07-14T06:45:37Z [Term] id: FYPO:0000414 name: decreased cell fusion def: "A cellular process phenotype in which the occurrence of plasma membrane fusion is decreased." [PomBase:mah] synonym: "cell fusion: decreased" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000412 ! abnormal cell fusion intersection_of: PATO:0002052 intersection_of: inheres_in GO:0045026 created_by: midori creation_date: 2011-07-14T06:45:37Z [Term] id: FYPO:0000415 name: decreased chromosome segregation def: "A cellular process phenotype in which the occurrence of chromosome segregation is decreased." [PomBase:mah] synonym: "chromosome segregation: decreased" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000029 ! abnormal chromosome segregation intersection_of: PATO:0002052 intersection_of: inheres_in GO:0007059 created_by: midori creation_date: 2011-07-14T06:45:37Z [Term] id: FYPO:0000416 name: premature chromosome segregation def: "A cellular process phenotype in which chromosome segregation occurs prematurely." [PomBase:mah] synonym: "chromosome segregation: premature" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000029 ! abnormal chromosome segregation intersection_of: PATO:0000694 intersection_of: inheres_in GO:0007059 created_by: midori creation_date: 2011-07-14T06:45:37Z [Term] id: FYPO:0000417 name: cytokinesis abolished def: "A cellular process phenotype in which cell cycle cytokinesis is abolished." [PomBase:mah] synonym: "absent cytokinesis" EXACT [PomBase:mah] synonym: "cytokinesis: absent" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000032 ! abnormal cytokinesis intersection_of: PATO:0001508 intersection_of: inheres_in GO:0033205 created_by: midori creation_date: 2011-07-14T06:45:37Z [Term] id: FYPO:0000418 name: decreased cytokinesis def: "A cellular process phenotype in which the occurrence of cell cycle cytokinesis is decreased." [PomBase:mah] synonym: "cytokinesis: decreased" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000032 ! abnormal cytokinesis intersection_of: PATO:0002052 intersection_of: inheres_in GO:0033205 created_by: midori creation_date: 2011-07-14T06:45:37Z [Term] id: FYPO:0000419 name: decreased rate of cytokinesis def: "A cellular process phenotype in which the rate of cell cycle cytokinesis is decreased." [PomBase:mah] synonym: "cytokinesis: decreased rate" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000032 ! abnormal cytokinesis intersection_of: PATO:0000911 intersection_of: inheres_in GO:0033205 created_by: midori creation_date: 2011-07-14T06:45:37Z [Term] id: FYPO:0000420 name: delayed cytokinesis def: "A cellular process phenotype in which cell cycle cytokinesis is delayed." [PomBase:mah] synonym: "cytokinesis: delayed" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000032 ! abnormal cytokinesis intersection_of: PATO:0000502 intersection_of: inheres_in GO:0033205 created_by: midori creation_date: 2011-07-14T06:45:37Z [Term] id: FYPO:0000421 name: endocytosis abolished def: "A cellular process phenotype in which endocytosis is abolished." [PomBase:mah] synonym: "absent endocytosis" EXACT [PomBase:mah] synonym: "endocytosis: absent" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000034 ! abnormal endocytosis intersection_of: PATO:0001508 intersection_of: inheres_in GO:0006897 created_by: midori creation_date: 2011-07-14T06:45:37Z [Term] id: FYPO:0000422 name: decreased endocytosis def: "A cellular process phenotype in which the occurrence of endocytosis is decreased." [PomBase:mah] synonym: "endocytosis: decreased" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000034 ! abnormal endocytosis intersection_of: PATO:0002052 intersection_of: inheres_in GO:0006897 created_by: midori creation_date: 2011-07-14T06:45:37Z [Term] id: FYPO:0000423 name: decreased rate of endocytosis def: "A cellular process phenotype in which the rate of endocytosis is decreased." [PomBase:mah] synonym: "endocytosis: decreased rate" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000034 ! abnormal endocytosis intersection_of: PATO:0000911 intersection_of: inheres_in GO:0006897 created_by: midori creation_date: 2011-07-14T06:45:37Z [Term] id: FYPO:0000424 name: delayed endocytosis def: "A cellular process phenotype in which endocytosis is delayed." [PomBase:mah] synonym: "endocytosis: delayed" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000034 ! abnormal endocytosis intersection_of: PATO:0000502 intersection_of: inheres_in GO:0006897 created_by: midori creation_date: 2011-07-14T06:45:37Z [Term] id: FYPO:0000425 name: increased endocytosis def: "A cellular process phenotype in which the occurrence of endocytosis is increased." [PomBase:mah] synonym: "endocytosis: increased" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000034 ! abnormal endocytosis intersection_of: PATO:0002051 intersection_of: inheres_in GO:0006897 created_by: midori creation_date: 2011-07-14T06:45:37Z [Term] id: FYPO:0000426 name: normal endocytosis def: "A cellular process phenotype in which endocytosis is normal." [PomBase:mah] synonym: "endocytosis: normal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000627 ! normal cellular process intersection_of: PATO:0000001 intersection_of: inheres_in GO:0006897 intersection_of: qualifier PATO:0000461 created_by: midori creation_date: 2011-07-14T06:45:37Z [Term] id: FYPO:0000427 name: abnormal G1 to G0 transition def: "A cellular process phenotype in which the G1 to G0 transition is abnormal." [PomBase:mah] synonym: "abnormal cell cycle quiescence" RELATED [GO:0070314, PomBase:mah] synonym: "abnormal entry into G0 (stationary phase)" EXACT [PomBase:mah] synonym: "abnormal establishment of cell quiescence" EXACT [GO:0070314, PomBase:mah] synonym: "abnormal G1/G0 transition" EXACT [GO:0070314, PomBase:mah] synonym: "abnormal stationary phase" RELATED [GO:0070314, PomBase:mah] synonym: "entry into G0 (stationary phase): abnormal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000145 ! regulation phenotype intersection_of: PATO:0000001 intersection_of: inheres_in GO:0070314 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-07-14T06:45:37Z [Term] id: FYPO:0000428 name: entry into G0 abolished def: "A cellular process phenotype in which the G1 to G0 transition is abolished." [PomBase:mah] synonym: "absent entry into G0 (stationary phase)" EXACT [PomBase:mah] synonym: "cell cycle quiescence abolished" RELATED [GO:0070314, PomBase:mah] synonym: "entry into G0 (stationary phase): absent" EXACT [SGD:phenotype_annotation] synonym: "establishment of cell quiescence abolished" EXACT [GO:0070314, PomBase:mah] synonym: "G1/G0 transition abolished" EXACT [GO:0070314, PomBase:mah] synonym: "stationary phase abolished" RELATED [GO:0070314, PomBase:mah] is_a: FYPO:0000427 ! abnormal G1 to G0 transition intersection_of: PATO:0001508 intersection_of: inheres_in GO:0070314 created_by: midori creation_date: 2011-07-14T06:45:37Z [Term] id: FYPO:0000429 name: delayed G0 to G1 transition def: "A cellular process phenotype in which the G0 to G1 transition is abnormal." [PomBase:mah] synonym: "delayed cell cycle quiescence" RELATED [GO:0070314, PomBase:mah] synonym: "delayed establishment of cell quiescence" EXACT [GO:0070314, PomBase:mah] synonym: "delayed exit from G0 (stationary phase)" EXACT [PomBase:mah] synonym: "delayed G1/G0 transition" EXACT [GO:0070314, PomBase:mah] synonym: "delayed stationary phase" RELATED [GO:0070314, PomBase:mah] synonym: "exit from G0 (stationary phase): delayed" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000628 ! abnormal cellular process intersection_of: PATO:0000502 intersection_of: inheres_in GO:0045023 created_by: midori creation_date: 2011-07-14T06:45:37Z [Term] id: FYPO:0000430 name: abnormal fermentation def: "A cellular process phenotype in which fermentation is abnormal." [PomBase:mah] synonym: "abnormal fermentative metabolism" EXACT [PomBase:mah] synonym: "fermentative metabolism: abnormal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000140 ! cellular metabolism phenotype intersection_of: PATO:0000001 intersection_of: inheres_in GO:0006113 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-07-14T06:45:37Z [Term] id: FYPO:0000431 name: fermentation abolished def: "A cellular process phenotype in which fermentation is abolished." [PomBase:mah] synonym: "absent fermentative metabolism" EXACT [PomBase:mah] synonym: "fermentative metabolism abolished" EXACT [PomBase:mah] synonym: "fermentative metabolism: absent" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000430 ! abnormal fermentation intersection_of: PATO:0001508 intersection_of: inheres_in GO:0006113 created_by: midori creation_date: 2011-07-14T06:45:37Z [Term] id: FYPO:0000432 name: decreased fermentation def: "A cellular process phenotype in which the occurrence of fermentation is decreased." [PomBase:mah] synonym: "decreased fermentative metabolism" EXACT [PomBase:mah] synonym: "fermentative metabolism: decreased" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000430 ! abnormal fermentation intersection_of: PATO:0002052 intersection_of: inheres_in GO:0006113 created_by: midori creation_date: 2011-07-14T06:45:37Z [Term] id: FYPO:0000433 name: increased fermentation def: "A cellular process phenotype in which the occurrence of fermentation is increased." [PomBase:mah] synonym: "fermentative metabolism: increased" EXACT [SGD:phenotype_annotation] synonym: "increased fermentative metabolism" EXACT [PomBase:mah] is_a: FYPO:0000430 ! abnormal fermentation intersection_of: PATO:0002051 intersection_of: inheres_in GO:0006113 created_by: midori creation_date: 2011-07-14T06:45:37Z [Term] id: FYPO:0000434 name: normal fermentation def: "A cellular process phenotype in which fermentation is normal." [PomBase:mah] synonym: "fermentative metabolism: normal" EXACT [SGD:phenotype_annotation] synonym: "normal fermentative metabolism" EXACT [PomBase:mah] is_a: FYPO:0000627 ! normal cellular process intersection_of: PATO:0000001 intersection_of: inheres_in GO:0006113 intersection_of: qualifier PATO:0000461 created_by: midori creation_date: 2011-07-14T06:45:37Z [Term] id: FYPO:0000439 name: normal filamentous growth def: "A cellular process phenotype in which filamentous growth is normal." [PomBase:mah] synonym: "filamentous growth: normal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000047 ! normal cell growth intersection_of: PATO:0000001 intersection_of: inheres_in GO:0030447 intersection_of: qualifier PATO:0000461 created_by: midori creation_date: 2011-07-14T06:45:37Z [Term] id: FYPO:0000440 name: sensitive to antimycin A def: "A phenotype in which cells show increased sensitivity to antimycin A." [PomBase:mah] is_a: FYPO:0000127 ! increased sensitivity to chemical intersection_of: PATO:0001551 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:22584 created_by: midori creation_date: 2011-08-03T04:41:43Z [Term] id: FYPO:0000441 name: resistance to antimycin A def: "An increased chemical resistance phenotype in which cells grow in the presence of a higher concentration of antimycin than normal." [PomBase:mah] synonym: "resistant to antimycin A" EXACT [PomBase:mah] is_a: FYPO:0000126 ! increased resistance to chemical intersection_of: PATO:0001552 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:22584 created_by: midori creation_date: 2011-08-03T04:41:43Z [Term] id: FYPO:0000442 name: slow cell growth on glycerol/ethanol carbon source def: "A cell growth phenotype in which cells grow at a slower rate than normal in a medium containing glycerol and ethanol as the carbon sources." [PomBase:mah] synonym: "slow cell growth on glycerol plus ethanol" EXACT [PomBase:mah] is_a: FYPO:0000046 ! slow cell growth intersection_of: FYPO:0000046 ! slow cell growth intersection_of: inheres_in BTO:0000316 intersection_of: qualifier PATO:0000467 intersection_of: towards CHEBI:16236 intersection_of: towards CHEBI:17754 created_by: midori creation_date: 2011-08-03T05:18:32Z [Term] id: FYPO:0000443 name: abnormal protein localization def: "A cell phenotype that affects the localization of a protein in a cell." [PomBase:mah] synonym: "abnormal cellular protein localisation" EXACT [PomBase:mah] synonym: "abnormal cellular protein localization" EXACT [PomBase:mah] synonym: "abnormal protein localisation" EXACT [PomBase:mah] is_a: FYPO:0000138 ! localization phenotype intersection_of: PATO:0000001 intersection_of: inheres_in GO:0034613 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-08-04T04:19:46Z [Term] id: FYPO:0000444 name: cell cycle arrest with replicated DNA def: "A cellular process phenotype in which progression through the mitotic cell cycle is arrested when cells have replicated genomic DNA." [PomBase:mah] comment: Arrest with replicated DNA may occur between late S and G2/M; if only DNA content is measured, the arrest point cannot be determined with greater precision. synonym: "cell cycle arrest with 2C DNA content" NARROW [PomBase:mah] is_a: FYPO:0000407 ! cell cycle arrest intersection_of: FYPO:0000407 ! cell cycle arrest intersection_of: preceded_by GO:0006261 created_by: midori creation_date: 2011-08-12T02:03:05Z [Term] id: FYPO:0000445 name: cell cycle arrest in mitotic G1 phase def: "A cellular process phenotype in which progression through the mitotic cell cycle is arrested in G1 phase." [PomBase:mah] comment: Note that this term should be used only for cell cycle arrest that occurs in mutants. For phenotypes affecting the G1 cell cycle that normally occurs in response to mating pheromone, see 'abnormal cell cycle arrest in response to pheromone' (FYPO:0000530) and its child terms. synonym: "mitotic cell cycle progression in G1 phase: arrested" EXACT [SGD:phenotype_annotation] synonym: "mitotic G1 phase arrest" EXACT [PomBase:mah] is_a: FYPO:0000407 ! cell cycle arrest is_a: FYPO:0000602 ! abnormal mitotic G1 phase progression intersection_of: PATO:0000297 intersection_of: inheres_in GO:0000080 created_by: midori creation_date: 2011-08-12T02:07:59Z [Term] id: FYPO:0000446 name: cell cycle arrest in mitotic G2 phase def: "A cellular process phenotype in which progression through the mitotic cell cycle is arrested in G2 phase." [PomBase:mah] synonym: "mitotic cell cycle progression in G2 phase: arrested" EXACT [SGD:phenotype_annotation] synonym: "mitotic G2 phase arrest" EXACT [PomBase:mah] is_a: FYPO:0000407 ! cell cycle arrest is_a: FYPO:0000563 ! abnormal mitotic G2 phase progression intersection_of: PATO:0000297 intersection_of: inheres_in GO:0000085 created_by: midori creation_date: 2011-08-12T02:11:06Z [Term] id: FYPO:0000447 name: abnormal protein complex assembly def: "A cellular process phenotype in which any process of protein complex assembly at the cellular level is abnormal." [PomBase:mah] is_a: FYPO:0000336 ! abnormal cellular component assembly intersection_of: PATO:0000001 intersection_of: inheres_in GO:0043623 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-08-12T02:26:26Z [Term] id: FYPO:0000448 name: abnormal MCM complex assembly def: "A cellular process phenotype in which MCM complex assembly is abnormal." [PomBase:mah] is_a: FYPO:0000447 ! abnormal protein complex assembly intersection_of: PATO:0000001 intersection_of: inheres_in GO:0072689 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-08-12T02:27:22Z [Term] id: FYPO:0000449 name: abnormal protein localization to centromere def: "A cell phenotype in which the localization of a protein to the centromere of a chromosome is abnormal." [PomBase:mah] synonym: "abnormal protein localisation to centromere" EXACT [PomBase:mah] synonym: "abnormal protein localisation to chromosome, centromeric region" EXACT [GO:0071459, PomBase:mah] synonym: "abnormal protein localization to chromosome, centric region" EXACT [GO:0071459, PomBase:mah] synonym: "abnormal protein localization to chromosome, centromeric region" EXACT [GO:0071459, PomBase:mah] is_a: FYPO:0000443 ! abnormal protein localization intersection_of: PATO:0000001 intersection_of: inheres_in GO:0071459 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-08-12T02:29:38Z [Term] id: FYPO:0000450 name: decreased protein localization to centromere def: "A cell phenotype in which the localization of a protein to the centromere of a chromosome is decreased." [PomBase:mah] synonym: "decreased protein localisation to centromere" EXACT [PomBase:mah] synonym: "decreased protein localisation to chromosome, centromeric region" EXACT [GO:0071459, PomBase:mah] synonym: "decreased protein localization to chromosome, centric region" EXACT [GO:0071459, PomBase:mah] synonym: "decreased protein localization to chromosome, centromeric region" EXACT [GO:0071459, PomBase:mah] is_a: FYPO:0000449 ! abnormal protein localization to centromere intersection_of: PATO:0002052 intersection_of: inheres_in GO:0071459 created_by: midori creation_date: 2011-08-12T02:33:53Z [Term] id: FYPO:0000451 name: increased protein localization to centromere def: "A cell phenotype in which the localization of a protein to the centromere of a chromosome is increased." [PomBase:mah] synonym: "increased protein localisation to centromere" EXACT [PomBase:mah] synonym: "increased protein localisation to chromosome, centromeric region" EXACT [GO:0071459, PomBase:mah] synonym: "increased protein localization to chromosome, centric region" EXACT [GO:0071459, PomBase:mah] synonym: "increased protein localization to chromosome, centromeric region" EXACT [GO:0071459, PomBase:mah] is_a: FYPO:0000449 ! abnormal protein localization to centromere intersection_of: PATO:0002051 intersection_of: inheres_in GO:0071459 created_by: midori creation_date: 2011-08-12T02:34:10Z [Term] id: FYPO:0000452 name: abnormal protein localization to chromatin def: "A cell phenotype in which the localization of a protein to chromatin is abnormal." [PomBase:mah] synonym: "abnormal protein localisation to chromatin" EXACT [GO:0071168, PomBase:mah] is_a: FYPO:0000443 ! abnormal protein localization intersection_of: PATO:0000001 intersection_of: inheres_in GO:0071168 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-08-12T02:35:06Z [Term] id: FYPO:0000453 name: DNA content decreased def: "A cell phenotype in which a cell contains less DNA than normal." [PomBase:mah] is_a: FYPO:0000002 ! cell phenotype intersection_of: PATO:0001163 intersection_of: inheres_in CL:0000000 intersection_of: towards CHEBI:16991 created_by: midori creation_date: 2011-08-12T02:37:29Z [Term] id: FYPO:0000454 name: inviable mixed population including long and short cells def: "A mixed population phenotype in which a microcolony forms, all cells in the population are inviable, and some cells are longer and other cells smaller than normal." [PomBase:mah] is_a: FYPO:0000299 ! microcolony formation is_a: FYPO:0000317 ! mixed population relationship: includes_cells_with_phenotype FYPO:0000017 ! elongated cells relationship: includes_cells_with_phenotype FYPO:0000023 ! small cells created_by: midori creation_date: 2011-08-12T02:39:05Z [Term] id: FYPO:0000455 name: accumulation of double-strand break sites def: "A cell phenotype in which the number of sites of double-strand breaks in DNA is greater than normal." [PomBase:mah] synonym: "accumulation of DNA damage foci" EXACT [PomBase:mah] synonym: "increased number of DNA damage foci" EXACT [PomBase:mah] synonym: "increased number of double-strand break sites" EXACT [PomBase:mah] is_a: FYPO:0000136 ! cellular structure phenotype intersection_of: PATO:0000470 intersection_of: inheres_in GO:0035861 created_by: midori creation_date: 2011-08-12T02:44:35Z [Term] id: FYPO:0000456 name: abnormal histone acetylation def: "A cellular process phenotype in which histone acetylation is abnormal." [PomBase:mah] is_a: FYPO:0000330 ! abnormal histone modification intersection_of: PATO:0000001 intersection_of: inheres_in GO:0016573 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-08-12T02:55:54Z [Term] id: FYPO:0000457 name: abnormal histone methylation def: "A cellular process phenotype in which histone methylation is abnormal." [PomBase:mah] is_a: FYPO:0000330 ! abnormal histone modification intersection_of: PATO:0000001 intersection_of: inheres_in GO:0016571 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-08-12T02:56:38Z [Term] id: FYPO:0000458 name: abnormal histone H3-K9 methylation def: "A cellular process phenotype in which methylation of lysine at position 9 of histone H3 is abnormal." [PomBase:mah] synonym: "abnormal histone H3 K9 methylation" EXACT [GO:0051567, PomBase:mah] synonym: "abnormal histone H3K9me" EXACT [GO:0051567, PomBase:mah] synonym: "abnormal histone lysine H3 K9 methylation" EXACT [GO:0051567, PomBase:mah] is_a: FYPO:0000457 ! abnormal histone methylation intersection_of: PATO:0000001 intersection_of: inheres_in GO:0051567 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-08-12T02:57:59Z [Term] id: FYPO:0000459 name: abnormal centromeric sister chromatid cohesion def: "A cellular process phenotype in which cohesion between centromeres of sister chromatids is abnormal." [PomBase:mah] synonym: "abnormal sister chromatid cohesion at centromere" EXACT [GO:0070601, PomBase:mah] is_a: FYPO:0000029 ! abnormal chromosome segregation intersection_of: PATO:0000001 intersection_of: inheres_in GO:0070601 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-08-12T03:12:26Z [Term] id: FYPO:0000460 name: decreased centromeric sister chromatid cohesion def: "A cellular process phenotype in which cohesion between centromeres of sister chromatids is decreased." [PomBase:mah] synonym: "decreased sister chromatid cohesion at centromere" EXACT [GO:0070601, PomBase:mah] is_a: FYPO:0000459 ! abnormal centromeric sister chromatid cohesion intersection_of: PATO:0002052 intersection_of: inheres_in GO:0070601 created_by: midori creation_date: 2011-08-12T03:14:23Z [Term] id: FYPO:0000461 name: flocculation abolished def: "A cellular process phenotype in which flocculation is abolished." [PomBase:mah] synonym: "absent flocculation" EXACT [PomBase:mah] synonym: "flocculation: absent" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000003 ! cell population phenotype is_a: FYPO:0000300 ! biological process phenotype intersection_of: PATO:0001508 intersection_of: inheres_in GO:0000128 created_by: midori creation_date: 2011-08-12T04:05:34Z [Term] id: FYPO:0000463 name: normal flocculation def: "A cellular process phenotype in which flocculation is normal." [PomBase:mah] synonym: "flocculation: normal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000003 ! cell population phenotype is_a: FYPO:0000257 ! normal phenotype is_a: FYPO:0000300 ! biological process phenotype intersection_of: PATO:0000001 intersection_of: inheres_in GO:0000128 intersection_of: qualifier PATO:0000461 created_by: midori creation_date: 2011-08-12T04:05:34Z [Term] id: FYPO:0000464 name: decreased intracellular transport def: "A cellular process phenotype in which the occurrence of intracellular transport is decreased." [PomBase:mah] synonym: "intracellular transport: decreased" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000149 ! transport phenotype intersection_of: PATO:0002052 intersection_of: inheres_in GO:0046907 created_by: midori creation_date: 2011-08-12T04:05:34Z [Term] id: FYPO:0000466 name: decreased invasive growth def: "A cellular process phenotype in which the occurrence of invasive growth is decreased." [PomBase:mah] comment: This term was made obsolete because it is not required to describe fission yeast. synonym: "invasive growth: decreased" EXACT [SGD:phenotype_annotation] is_obsolete: true consider: FYPO:0000552 created_by: midori creation_date: 2011-08-12T04:05:34Z [Term] id: FYPO:0000467 name: increased invasive growth def: "A cellular process phenotype in which the occurrence of invasive growth is increased." [PomBase:mah] comment: This term was made obsolete because it is not required to describe fission yeast. synonym: "invasive growth: increased" EXACT [SGD:phenotype_annotation] is_obsolete: true consider: FYPO:0000553 created_by: midori creation_date: 2011-08-12T04:05:34Z [Term] id: FYPO:0000468 name: abnormal mating type switching def: "A cellular process phenotype in which mating type switching is abnormal." [PomBase:mah] synonym: "mating type switching: abnormal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000293 ! DNA metabolism phenotype intersection_of: PATO:0000001 intersection_of: inheres_in GO:0007533 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-08-12T04:05:34Z [Term] id: FYPO:0000469 name: mating type switching abolished def: "A cellular process phenotype in which mating type switching is abolished." [PomBase:mah] synonym: "absent mating type switching" EXACT [PomBase:mah] synonym: "mating type switching: absent" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000468 ! abnormal mating type switching intersection_of: PATO:0001508 intersection_of: inheres_in GO:0007533 created_by: midori creation_date: 2011-08-12T04:05:34Z [Term] id: FYPO:0000470 name: decreased mating type switching def: "A cellular process phenotype in which the occurrence of mating type switching is decreased." [PomBase:mah] synonym: "mating type switching: decreased" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000468 ! abnormal mating type switching intersection_of: PATO:0002052 intersection_of: inheres_in GO:0007533 created_by: midori creation_date: 2011-08-12T04:05:34Z [Term] id: FYPO:0000471 name: increased mating type switching def: "A cellular process phenotype in which the occurrence of mating type switching is increased." [PomBase:mah] synonym: "mating type switching: increased" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000468 ! abnormal mating type switching intersection_of: PATO:0002051 intersection_of: inheres_in GO:0007533 created_by: midori creation_date: 2011-08-12T04:05:34Z [Term] id: FYPO:0000472 name: normal mating type switching def: "A cellular process phenotype in which mating type switching is normal." [PomBase:mah] synonym: "mating type switching: normal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000627 ! normal cellular process intersection_of: PATO:0000001 intersection_of: inheres_in GO:0007533 intersection_of: qualifier PATO:0000461 created_by: midori creation_date: 2011-08-12T04:05:34Z [Term] id: FYPO:0000473 name: increased mitotic recombination def: "A cellular process phenotype in which the occurrence of mitotic recombination is increased." [PomBase:mah] synonym: "mitotic recombination: increased" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000481 ! abnormal mitotic recombination intersection_of: PATO:0002051 intersection_of: inheres_in GO:0006312 created_by: midori creation_date: 2011-08-15T10:19:32Z [Term] id: FYPO:0000474 name: meiosis abolished def: "A cellular process phenotype in which meiosis is abolished." [PomBase:mah] synonym: "absent meiosis" EXACT [PomBase:mah] synonym: "meiosis: absent" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000051 ! abnormal meiosis intersection_of: PATO:0001508 intersection_of: inheres_in GO:0007126 created_by: midori creation_date: 2011-08-15T10:19:32Z [Term] id: FYPO:0000475 name: arrested meiosis def: "A cellular process phenotype in which meiosis is arrested." [PomBase:mah] synonym: "meiosis: arrested" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000051 ! abnormal meiosis intersection_of: PATO:0000297 intersection_of: inheres_in GO:0007126 created_by: midori creation_date: 2011-08-15T10:19:32Z [Term] id: FYPO:0000476 name: decreased meiosis def: "A cellular process phenotype in which the occurrence of meiosis is decreased." [PomBase:mah] synonym: "meiosis: decreased" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000051 ! abnormal meiosis intersection_of: PATO:0002052 intersection_of: inheres_in GO:0007126 created_by: midori creation_date: 2011-08-15T10:19:32Z [Term] id: FYPO:0000477 name: delayed meiosis def: "A cellular process phenotype in which meiosis is delayed." [PomBase:mah] synonym: "meiosis: delayed" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000051 ! abnormal meiosis intersection_of: PATO:0000502 intersection_of: inheres_in GO:0007126 created_by: midori creation_date: 2011-08-15T10:19:32Z [Term] id: FYPO:0000478 name: normal meiosis def: "A cellular process phenotype in which meiosis is normal." [PomBase:mah] synonym: "meiosis: normal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000627 ! normal cellular process intersection_of: PATO:0000001 intersection_of: inheres_in GO:0007126 intersection_of: qualifier PATO:0000461 created_by: midori creation_date: 2011-08-15T10:19:32Z [Term] id: FYPO:0000479 name: premature meiosis def: "A cellular process phenotype in which meiosis occurs prematurely." [PomBase:mah] synonym: "meiosis: premature" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000051 ! abnormal meiosis intersection_of: PATO:0000694 intersection_of: inheres_in GO:0007126 created_by: midori creation_date: 2011-08-15T10:19:32Z [Term] id: FYPO:0000480 name: delayed mitotic G1 phase progression def: "A cellular process phenotype in which progression through the G1 phase of the mitotic cell cycle is delayed." [PomBase:mah] synonym: "mitotic cell cycle delay in G1" EXACT [PomBase:mah] synonym: "mitotic cell cycle progression in G1 phase: delayed" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000409 ! delayed cell cycle progression is_a: FYPO:0000602 ! abnormal mitotic G1 phase progression intersection_of: PATO:0000502 intersection_of: inheres_in GO:0000080 created_by: midori creation_date: 2011-08-16T10:03:01Z [Term] id: FYPO:0000481 name: abnormal mitotic recombination def: "A cellular process phenotype in which mitotic recombination is abnormal." [PomBase:mah] synonym: "mitotic recombination: abnormal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000063 ! abnormal DNA recombination intersection_of: PATO:0000001 intersection_of: inheres_in GO:0006312 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-08-15T10:19:32Z [Term] id: FYPO:0000482 name: decreased mitotic recombination def: "A cellular process phenotype in which the occurrence of mitotic recombination is decreased." [PomBase:mah] synonym: "mitotic recombination: decreased" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000481 ! abnormal mitotic recombination intersection_of: PATO:0002052 intersection_of: inheres_in GO:0006312 created_by: midori creation_date: 2011-08-15T10:19:32Z [Term] id: FYPO:0000483 name: increased rate of mitotic recombination def: "A cellular process phenotype in which the rate of mitotic recombination is increased." [PomBase:mah] synonym: "mitotic recombination: increased rate" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000481 ! abnormal mitotic recombination intersection_of: PATO:0000912 intersection_of: inheres_in GO:0006312 created_by: midori creation_date: 2011-08-15T10:19:32Z [Term] id: FYPO:0000484 name: meiotic recombination abolished def: "A cellular process phenotype in which reciprocal meiotic recombination is abolished." [PomBase:mah] synonym: "absent meiotic recombination" EXACT [PomBase:mah] synonym: "meiotic recombination: absent" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000008 ! abnormal meiotic recombination intersection_of: PATO:0000001 intersection_of: PATO:0001508 intersection_of: inheres_in GO:0007131 created_by: midori creation_date: 2011-08-15T10:19:32Z [Term] id: FYPO:0000485 name: decreased meiotic recombination def: "A cellular process phenotype in which the occurrence of reciprocal meiotic recombination is decreased." [PomBase:mah] synonym: "meiotic recombination: decreased" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000008 ! abnormal meiotic recombination intersection_of: PATO:0002052 intersection_of: inheres_in GO:0007131 created_by: midori creation_date: 2011-08-15T10:19:32Z [Term] id: FYPO:0000486 name: delayed meiotic recombination def: "A cellular process phenotype in which reciprocal meiotic recombination is delayed." [PomBase:mah] synonym: "meiotic recombination: delayed" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000008 ! abnormal meiotic recombination intersection_of: PATO:0000502 intersection_of: inheres_in GO:0007131 created_by: midori creation_date: 2011-08-15T10:19:32Z [Term] id: FYPO:0000487 name: increased meiotic recombination def: "A cellular process phenotype in which the occurrence of reciprocal meiotic recombination is increased." [PomBase:mah] synonym: "meiotic recombination: increased" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000008 ! abnormal meiotic recombination intersection_of: PATO:0002051 intersection_of: inheres_in GO:0007131 created_by: midori creation_date: 2011-08-15T10:19:32Z [Term] id: FYPO:0000488 name: normal meiotic recombination def: "A cellular process phenotype in which reciprocal meiotic recombination is normal." [PomBase:mah] synonym: "meiotic recombination: normal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000627 ! normal cellular process intersection_of: PATO:0000001 intersection_of: inheres_in GO:0007131 intersection_of: qualifier PATO:0000461 created_by: midori creation_date: 2011-08-15T10:19:32Z [Term] id: FYPO:0000489 name: abnormal mitochondrial distribution def: "A cellular process phenotype in which mitochondrion distribution is abnormal." [PomBase:mah] synonym: "mitochondrial distribution: abnormal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000138 ! localization phenotype intersection_of: PATO:0000001 intersection_of: inheres_in GO:0048311 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-08-15T10:19:32Z [Term] id: FYPO:0000490 name: abnormal mitochondrial genome maintenance def: "A cellular process phenotype in which mitochondrial genome maintenance is abnormal." [PomBase:mah] synonym: "mitochondrial genome maintenance: abnormal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000628 ! abnormal cellular process intersection_of: PATO:0000001 intersection_of: inheres_in GO:0000002 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-08-15T10:19:32Z [Term] id: FYPO:0000491 name: mitochondrial genome maintenance abolished def: "A cellular process phenotype in which mitochondrial genome maintenance is abolished." [PomBase:mah] synonym: "absent mitochondrial genome maintenance" EXACT [PomBase:mah] synonym: "mitochondrial genome maintenance: absent" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000490 ! abnormal mitochondrial genome maintenance intersection_of: PATO:0001508 intersection_of: inheres_in GO:0000002 created_by: midori creation_date: 2011-08-15T10:19:32Z [Term] id: FYPO:0000492 name: decreased mitochondrial genome maintenance def: "A cellular process phenotype in which the occurrence of mitochondrial genome maintenance is decreased." [PomBase:mah] synonym: "mitochondrial genome maintenance: decreased" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000490 ! abnormal mitochondrial genome maintenance intersection_of: PATO:0002052 intersection_of: inheres_in GO:0000002 created_by: midori creation_date: 2011-08-15T10:19:32Z [Term] id: FYPO:0000493 name: increased mitochondrial genome maintenance def: "A cellular process phenotype in which the occurrence of mitochondrial genome maintenance is increased." [PomBase:mah] synonym: "mitochondrial genome maintenance: increased" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000490 ! abnormal mitochondrial genome maintenance intersection_of: PATO:0002051 intersection_of: inheres_in GO:0000002 created_by: midori creation_date: 2011-08-15T10:19:32Z [Term] id: FYPO:0000494 name: normal mitochondrial genome maintenance def: "A cellular process phenotype in which mitochondrial genome maintenance is normal." [PomBase:mah] synonym: "mitochondrial genome maintenance: normal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000627 ! normal cellular process intersection_of: PATO:0000001 intersection_of: inheres_in GO:0000002 intersection_of: qualifier PATO:0000461 created_by: midori creation_date: 2011-08-15T10:19:32Z [Term] id: FYPO:0000495 name: abnormal mitochondrial transport def: "A cellular process phenotype in which mitochondrial transport is abnormal." [PomBase:mah] synonym: "mitochondrial transport: abnormal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000149 ! transport phenotype intersection_of: PATO:0000001 intersection_of: inheres_in GO:0006839 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-08-15T10:19:32Z [Term] id: FYPO:0000496 name: decreased mitochondrial transport def: "A cellular process phenotype in which the occurrence of mitochondrial transport is decreased." [PomBase:mah] synonym: "mitochondrial transport: decreased" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000464 ! decreased intracellular transport is_a: FYPO:0000495 ! abnormal mitochondrial transport intersection_of: PATO:0002052 intersection_of: inheres_in GO:0006839 created_by: midori creation_date: 2011-08-15T10:19:32Z [Term] id: FYPO:0000497 name: decreased rate of mitochondrial transport def: "A cellular process phenotype in which the rate of mitochondrial transport is decreased." [PomBase:mah] synonym: "mitochondrial transport: decreased rate" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000495 ! abnormal mitochondrial transport intersection_of: PATO:0000911 intersection_of: inheres_in GO:0006839 created_by: midori creation_date: 2011-08-15T10:19:32Z [Term] id: FYPO:0000498 name: normal mitochondrial transport def: "A cellular process phenotype in which mitochondrial transport is normal." [PomBase:mah] synonym: "mitochondrial transport: normal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000627 ! normal cellular process intersection_of: PATO:0000001 intersection_of: inheres_in GO:0006839 intersection_of: qualifier PATO:0000461 created_by: midori creation_date: 2011-08-15T10:19:32Z [Term] id: FYPO:0000499 name: mitophagy abolished def: "A cellular process phenotype in which mitophagy is abolished." [PomBase:mah] synonym: "absent mitophagy" EXACT [PomBase:mah] synonym: "mitophagy: absent" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000380 ! autophagy abolished intersection_of: PATO:0001508 intersection_of: inheres_in GO:0000422 created_by: midori creation_date: 2011-08-15T10:19:32Z [Term] id: FYPO:0000500 name: decreased mitophagy def: "A cellular process phenotype in which the occurrence of mitophagy is decreased." [PomBase:mah] synonym: "mitophagy: decreased" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000381 ! decreased autophagy intersection_of: PATO:0002052 intersection_of: inheres_in GO:0000422 created_by: midori creation_date: 2011-08-15T10:19:32Z [Term] id: FYPO:0000501 name: increased mitophagy def: "A cellular process phenotype in which the occurrence of mitophagy is increased." [PomBase:mah] synonym: "mitophagy: increased" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000384 ! increased autophagy intersection_of: PATO:0002051 intersection_of: inheres_in GO:0000422 created_by: midori creation_date: 2011-08-15T10:19:32Z [Term] id: FYPO:0000502 name: arrested mitotic cell cycle def: "A cellular process phenotype in which progression through the mitotic cell cycle is arrested." [PomBase:mah] synonym: "mitotic cell cycle arrest" RELATED [PomBase:mah] synonym: "mitotic cell cycle arrested" EXACT [PomBase:mah] synonym: "mitotic cell cycle: arrested" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000059 ! abnormal mitotic cell cycle progression intersection_of: PATO:0000297 intersection_of: inheres_in GO:0000278 created_by: midori creation_date: 2011-08-15T10:19:32Z [Term] id: FYPO:0000503 name: normal mitotic recombination def: "A cellular process phenotype in which mitotic recombination is normal." [PomBase:mah] synonym: "mitotic recombination: normal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000627 ! normal cellular process intersection_of: PATO:0000001 intersection_of: inheres_in GO:0006312 intersection_of: qualifier PATO:0000461 created_by: midori creation_date: 2011-08-15T11:08:30Z [Term] id: FYPO:0000504 name: decreased necrotic cell death def: "A cellular process phenotype in which the occurrence of necrotic cell death is decreased." [PomBase:mah] synonym: "necrotic cell death: decreased" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000628 ! abnormal cellular process intersection_of: PATO:0002052 intersection_of: inheres_in GO:0070265 created_by: midori creation_date: 2011-08-15T11:08:30Z [Term] id: FYPO:0000505 name: increased necrotic cell death def: "A cellular process phenotype in which the occurrence of necrotic cell death is increased." [PomBase:mah] synonym: "necrotic cell death: increased" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000628 ! abnormal cellular process intersection_of: PATO:0002051 intersection_of: inheres_in GO:0070265 created_by: midori creation_date: 2011-08-15T11:08:30Z [Term] id: FYPO:0000506 name: abnormal nuclear export def: "A cellular process phenotype in which nuclear export is abnormal." [PomBase:mah] synonym: "nuclear export: abnormal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000518 ! abnormal nuclear transport intersection_of: PATO:0000001 intersection_of: inheres_in GO:0051168 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-08-15T11:08:30Z [Term] id: FYPO:0000507 name: nuclear export abolished def: "A cellular process phenotype in which nuclear export is abolished." [PomBase:mah] synonym: "absent nuclear export" EXACT [PomBase:mah] synonym: "nuclear export: absent" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000506 ! abnormal nuclear export intersection_of: PATO:0001508 intersection_of: inheres_in GO:0051168 created_by: midori creation_date: 2011-08-15T11:08:30Z [Term] id: FYPO:0000508 name: decreased nuclear export def: "A cellular process phenotype in which the occurrence of nuclear export is decreased." [PomBase:mah] synonym: "nuclear export: decreased" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000464 ! decreased intracellular transport is_a: FYPO:0000506 ! abnormal nuclear export intersection_of: PATO:0002052 intersection_of: inheres_in GO:0051168 created_by: midori creation_date: 2011-08-15T11:08:30Z [Term] id: FYPO:0000509 name: normal nuclear export def: "A cellular process phenotype in which nuclear export is normal." [PomBase:mah] synonym: "nuclear export: normal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000627 ! normal cellular process intersection_of: PATO:0000001 intersection_of: inheres_in GO:0051168 intersection_of: qualifier PATO:0000461 created_by: midori creation_date: 2011-08-15T11:08:30Z [Term] id: FYPO:0000510 name: abnormal nuclear fusion during mating def: "A cellular process phenotype in which karyogamy involved in conjugation with cellular fusion is abnormal." [PomBase:mah] synonym: "abnormal karyogamy" EXACT [PomBase:mah] synonym: "abnormal karyogamy involved in conjugation with cellular fusion" EXACT [PomBase:mah] synonym: "nuclear fusion during mating: abnormal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000628 ! abnormal cellular process intersection_of: PATO:0000001 intersection_of: inheres_in GO:0000742 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-08-15T11:08:30Z [Term] id: FYPO:0000511 name: nuclear fusion during mating abolished def: "A cellular process phenotype in which karyogamy involved in conjugation with cellular fusion is abolished." [PomBase:mah] synonym: "absent nuclear fusion during mating" EXACT [PomBase:mah] synonym: "karyogamy abolished" EXACT [PomBase:mah] synonym: "karyogamy involved in conjugation with cellular fusion abolished" EXACT [PomBase:mah] synonym: "nuclear fusion during mating: absent" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000510 ! abnormal nuclear fusion during mating intersection_of: PATO:0001508 intersection_of: inheres_in GO:0000742 created_by: midori creation_date: 2011-08-15T11:08:30Z [Term] id: FYPO:0000512 name: decreased nuclear fusion during mating def: "A cellular process phenotype in which the occurrence of karyogamy involved in conjugation with cellular fusion is decreased." [PomBase:mah] synonym: "decreased karyogamy" EXACT [PomBase:mah] synonym: "decreased karyogamy involved in conjugation with cellular fusion" EXACT [PomBase:mah] synonym: "nuclear fusion during mating: decreased" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000510 ! abnormal nuclear fusion during mating intersection_of: PATO:0002052 intersection_of: inheres_in GO:0000742 created_by: midori creation_date: 2011-08-15T11:08:30Z [Term] id: FYPO:0000513 name: delayed nuclear fusion during mating def: "A cellular process phenotype in which karyogamy involved in conjugation with cellular fusion is delayed." [PomBase:mah] synonym: "delayed karyogamy" EXACT [PomBase:mah] synonym: "delayed karyogamy involved in conjugation with cellular fusion" EXACT [PomBase:mah] synonym: "nuclear fusion during mating: delayed" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000510 ! abnormal nuclear fusion during mating intersection_of: PATO:0000502 intersection_of: inheres_in GO:0000742 created_by: midori creation_date: 2011-08-15T11:08:30Z [Term] id: FYPO:0000514 name: nuclear import abolished def: "A cellular process phenotype in which nuclear import is abolished." [PomBase:mah] synonym: "absent nuclear import" EXACT [PomBase:mah] synonym: "nuclear import: absent" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000518 ! abnormal nuclear transport intersection_of: PATO:0001508 intersection_of: inheres_in GO:0051170 created_by: midori creation_date: 2011-08-15T11:08:30Z [Term] id: FYPO:0000515 name: decreased nuclear import def: "A cellular process phenotype in which the occurrence of nuclear import is decreased." [PomBase:mah] synonym: "nuclear import: decreased" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000464 ! decreased intracellular transport is_a: FYPO:0000518 ! abnormal nuclear transport intersection_of: PATO:0002052 intersection_of: inheres_in GO:0051170 created_by: midori creation_date: 2011-08-15T11:08:30Z [Term] id: FYPO:0000516 name: normal nuclear import def: "A cellular process phenotype in which nuclear import is normal." [PomBase:mah] synonym: "nuclear import: normal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000627 ! normal cellular process intersection_of: PATO:0000001 intersection_of: inheres_in GO:0051170 intersection_of: qualifier PATO:0000461 created_by: midori creation_date: 2011-08-15T11:08:30Z [Term] id: FYPO:0000517 name: abnormal nucleus localization def: "A cellular process phenotype in which nucleus localization is abnormal." [PomBase:mah] synonym: "abnormal nuclear localization" EXACT [PomBase:mah] synonym: "abnormal nuclear position" EXACT [PomBase:mah] synonym: "abnormal nucleus localisation" EXACT [PomBase:mah] synonym: "nuclear position: abnormal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000138 ! localization phenotype intersection_of: PATO:0000001 intersection_of: inheres_in GO:0051647 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-08-15T11:08:30Z [Term] id: FYPO:0000518 name: abnormal nuclear transport def: "A cellular process phenotype in which nuclear transport is abnormal." [PomBase:mah] synonym: "nuclear transport: abnormal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000149 ! transport phenotype intersection_of: PATO:0000001 intersection_of: inheres_in GO:0051169 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-08-15T11:08:30Z [Term] id: FYPO:0000519 name: decreased oxidative phosphorylation def: "A cellular process phenotype in which the occurrence of oxidative phosphorylation is decreased." [PomBase:mah] synonym: "oxidative phosphorylation: decreased" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000140 ! cellular metabolism phenotype intersection_of: PATO:0002052 intersection_of: inheres_in GO:0006119 created_by: midori creation_date: 2011-08-15T11:08:30Z [Term] id: FYPO:0000520 name: increased oxidative phosphorylation def: "A cellular process phenotype in which the occurrence of oxidative phosphorylation is increased." [PomBase:mah] synonym: "oxidative phosphorylation: increased" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000140 ! cellular metabolism phenotype intersection_of: PATO:0002051 intersection_of: inheres_in GO:0006119 created_by: midori creation_date: 2011-08-15T11:08:30Z [Term] id: FYPO:0000521 name: abnormal peroxisome localization def: "A cellular process phenotype in which peroxisome localization is abnormal." [PomBase:mah] synonym: "abnormal peroxisomal distribution" EXACT [PomBase:mah] synonym: "abnormal peroxisome localisation" EXACT [PomBase:mah] synonym: "peroxisomal distribution: abnormal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000138 ! localization phenotype intersection_of: PATO:0000001 intersection_of: inheres_in GO:0060151 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-08-15T11:08:30Z [Term] id: FYPO:0000522 name: abnormal peroxisomal transport def: "A cellular process phenotype in which peroxisomal transport is abnormal." [PomBase:mah] synonym: "peroxisomal transport: abnormal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000149 ! transport phenotype intersection_of: PATO:0000001 intersection_of: inheres_in GO:0043574 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-08-15T11:08:30Z [Term] id: FYPO:0000523 name: peroxisomal transport abolished def: "A cellular process phenotype in which peroxisomal transport is abolished." [PomBase:mah] synonym: "absent peroxisomal transport" EXACT [PomBase:mah] synonym: "peroxisomal transport: absent" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000522 ! abnormal peroxisomal transport intersection_of: PATO:0001508 intersection_of: inheres_in GO:0043574 created_by: midori creation_date: 2011-08-15T11:08:30Z [Term] id: FYPO:0000524 name: decreased peroxisomal transport def: "A cellular process phenotype in which the occurrence of peroxisomal transport is decreased." [PomBase:mah] synonym: "peroxisomal transport: decreased" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000464 ! decreased intracellular transport is_a: FYPO:0000522 ! abnormal peroxisomal transport intersection_of: PATO:0002052 intersection_of: inheres_in GO:0043574 created_by: midori creation_date: 2011-08-15T11:08:30Z [Term] id: FYPO:0000525 name: peroxisome degradation abolished def: "A cellular process phenotype in which pexophagy is abolished." [PomBase:mah] synonym: "absent pexophagy" EXACT [PomBase:mah] synonym: "pexophagy abolished" EXACT [PomBase:mah] synonym: "pexophagy: absent" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000380 ! autophagy abolished intersection_of: PATO:0001508 intersection_of: inheres_in GO:0030242 created_by: midori creation_date: 2011-08-15T11:08:30Z [Term] id: FYPO:0000526 name: decreased peroxisome degradation def: "A cellular process phenotype in which the occurrence of pexophagy is decreased." [PomBase:mah] synonym: "decreased pexophagy" EXACT [PomBase:mah] synonym: "pexophagy: decreased" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000381 ! decreased autophagy intersection_of: PATO:0002052 intersection_of: inheres_in GO:0030242 created_by: midori creation_date: 2011-08-15T11:08:30Z [Term] id: FYPO:0000527 name: decreased rate of peroxisome degradation def: "A cellular process phenotype in which the rate of pexophagy is decreased." [PomBase:mah] synonym: "decreased rate of pexophagy" EXACT [PomBase:mah] synonym: "pexophagy: decreased rate" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000382 ! decreased rate of autophagy intersection_of: PATO:0000911 intersection_of: inheres_in GO:0030242 created_by: midori creation_date: 2011-08-15T11:08:30Z [Term] id: FYPO:0000528 name: delayed peroxisome degradation def: "A cellular process phenotype in which pexophagy is delayed." [PomBase:mah] synonym: "delayed pexophagy" EXACT [PomBase:mah] synonym: "pexophagy: delayed" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000383 ! delayed autophagy intersection_of: PATO:0000502 intersection_of: inheres_in GO:0030242 created_by: midori creation_date: 2011-08-15T11:08:30Z [Term] id: FYPO:0000529 name: normal peroxisome degradation def: "A cellular process phenotype in which peroxisome degradation is normal." [PomBase:mah] synonym: "normal pexophagy" EXACT [PomBase:mah] synonym: "pexophagy: normal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000385 ! normal autophagy intersection_of: PATO:0000001 intersection_of: inheres_in GO:0030242 intersection_of: qualifier PATO:0000461 created_by: midori creation_date: 2011-08-15T11:08:30Z [Term] id: FYPO:0000530 name: abnormal cell cycle arrest in response to pheromone def: "A cellular process phenotype in which cell cycle arrest in response to pheromone is abnormal." [PomBase:mah] synonym: "abnormal pheromone-induced cell cycle arrest" EXACT [PomBase:mah] synonym: "pheromone-induced cell cycle arrest: abnormal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000145 ! regulation phenotype is_a: FYPO:0000302 ! abnormal response to pheromone is_a: FYPO:0000631 ! cell cycle phenotype intersection_of: PATO:0000001 intersection_of: inheres_in GO:0000751 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-08-15T11:08:30Z [Term] id: FYPO:0000531 name: cell cycle arrest in response to pheromone abolished def: "A cellular process phenotype in which cell cycle arrest in response to pheromone is abolished." [PomBase:mah] synonym: "absent pheromone-induced cell cycle arrest" EXACT [PomBase:mah] synonym: "pheromone-induced cell cycle arrest abolished" EXACT [PomBase:mah] synonym: "pheromone-induced cell cycle arrest: absent" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000530 ! abnormal cell cycle arrest in response to pheromone intersection_of: PATO:0001508 intersection_of: inheres_in GO:0000751 created_by: midori creation_date: 2011-08-15T11:08:30Z [Term] id: FYPO:0000532 name: decreased cell cycle arrest in response to pheromone def: "A cellular process phenotype in which the occurrence of cell cycle arrest in response to pheromone is decreased." [PomBase:mah] synonym: "decreased pheromone-induced cell cycle arrest" EXACT [PomBase:mah] synonym: "pheromone-induced cell cycle arrest: decreased" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000530 ! abnormal cell cycle arrest in response to pheromone intersection_of: PATO:0002052 intersection_of: inheres_in GO:0000751 created_by: midori creation_date: 2011-08-15T11:08:30Z [Term] id: FYPO:0000533 name: normal cell cycle arrest in response to pheromone def: "A cellular process phenotype in which cell cycle arrest in response to pheromone is normal." [PomBase:mah] synonym: "normal pheromone-induced cell cycle arrest" EXACT [PomBase:mah] synonym: "pheromone-induced cell cycle arrest: normal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000627 ! normal cellular process intersection_of: PATO:0000001 intersection_of: inheres_in GO:0000751 intersection_of: qualifier PATO:0000461 created_by: midori creation_date: 2011-08-15T11:08:30Z [Term] id: FYPO:0000534 name: abnormal spindle pole body localization def: "A cellular process phenotype in which spindle pole body localization is abnormal." [PomBase:mah] synonym: "abnormal position of spindle pole body" EXACT [PomBase:mah] synonym: "abnormal spindle pole body localisation" EXACT [PomBase:mah] synonym: "position of spindle pole body: abnormal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000138 ! localization phenotype intersection_of: PATO:0000001 intersection_of: inheres_in GO:0070631 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-08-15T11:08:30Z [Term] id: FYPO:0000535 name: normal spindle pole body localization def: "A cellular process phenotype in which spindle pole body localization is normal." [PomBase:mah] synonym: "normal position of spindle pole body" EXACT [PomBase:mah] synonym: "normal spindle pole body localisation" EXACT [PomBase:mah] synonym: "position of spindle pole body: normal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000627 ! normal cellular process intersection_of: PATO:0000001 intersection_of: inheres_in GO:0070631 intersection_of: qualifier PATO:0000461 created_by: midori creation_date: 2011-08-15T11:08:30Z [Term] id: FYPO:0000536 name: abnormal protein secretion def: "A cellular process phenotype in which protein secretion is abnormal." [PomBase:mah] synonym: "protein secretion: abnormal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000540 ! abnormal protein transport intersection_of: PATO:0000001 intersection_of: inheres_in GO:0009306 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-08-15T11:08:30Z [Term] id: FYPO:0000537 name: protein secretion abolished def: "A cellular process phenotype in which protein secretion is abolished." [PomBase:mah] synonym: "absent protein secretion" EXACT [PomBase:mah] synonym: "protein secretion: absent" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000536 ! abnormal protein secretion intersection_of: PATO:0001508 intersection_of: inheres_in GO:0009306 created_by: midori creation_date: 2011-08-15T11:08:30Z [Term] id: FYPO:0000538 name: decreased protein secretion def: "A cellular process phenotype in which the occurrence of protein secretion is decreased." [PomBase:mah] synonym: "protein secretion: decreased" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000536 ! abnormal protein secretion is_a: FYPO:0000541 ! decreased protein transport intersection_of: PATO:0002052 intersection_of: inheres_in GO:0009306 created_by: midori creation_date: 2011-08-15T11:08:30Z [Term] id: FYPO:0000539 name: increased protein secretion def: "A cellular process phenotype in which the occurrence of protein secretion is increased." [PomBase:mah] synonym: "protein secretion: increased" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000536 ! abnormal protein secretion intersection_of: PATO:0002051 intersection_of: inheres_in GO:0009306 created_by: midori creation_date: 2011-08-15T11:08:30Z [Term] id: FYPO:0000540 name: abnormal protein transport def: "A cellular process phenotype in which protein transport is abnormal." [PomBase:mah] synonym: "protein transport: abnormal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000149 ! transport phenotype is_a: FYPO:0000443 ! abnormal protein localization intersection_of: PATO:0000001 intersection_of: inheres_in GO:0015031 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-08-15T11:08:30Z [Term] id: FYPO:0000541 name: decreased protein transport def: "A cellular process phenotype in which the occurrence of protein transport is decreased." [PomBase:mah] synonym: "protein transport: decreased" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000540 ! abnormal protein transport intersection_of: PATO:0002052 intersection_of: inheres_in GO:0015031 created_by: midori creation_date: 2011-08-15T11:08:30Z [Term] id: FYPO:0000542 name: increased rate of protein transport def: "A cellular process phenotype in which the rate of protein transport is increased." [PomBase:mah] synonym: "protein transport: increased rate" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000540 ! abnormal protein transport intersection_of: PATO:0000912 intersection_of: inheres_in GO:0015031 created_by: midori creation_date: 2011-08-15T11:08:30Z [Term] id: FYPO:0000543 name: increased duration of mitotic G1 phase def: "A cellular process phenotype in which the duration of progression through the G1 phase of the mitotic cell cycle is longer than normal." [PomBase:mah] synonym: "mitotic cell cycle progression in G1 phase: increased duration" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000602 ! abnormal mitotic G1 phase progression intersection_of: PATO:0000498 intersection_of: inheres_in GO:0000080 created_by: midori creation_date: 2011-08-16T10:03:01Z [Term] id: FYPO:0000544 name: protein modification abolished def: "A cellular process phenotype in which protein modification is abolished." [PomBase:mah] synonym: "abolished protein/peptide modification" EXACT [PomBase:mah] synonym: "absent protein/peptide modification" EXACT [PomBase:mah] synonym: "protein/peptide modification: absent" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000329 ! abnormal protein modification intersection_of: PATO:0001508 intersection_of: inheres_in GO:0006464 created_by: midori creation_date: 2011-08-15T11:41:34Z [Term] id: FYPO:0000545 name: decreased protein modification def: "A cellular process phenotype in which the occurrence of protein modification is decreased." [PomBase:mah] synonym: "decreased protein/peptide modification" EXACT [PomBase:mah] synonym: "protein/peptide modification: decreased" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000329 ! abnormal protein modification intersection_of: PATO:0002052 intersection_of: inheres_in GO:0006464 created_by: midori creation_date: 2011-08-15T11:41:34Z [Term] id: FYPO:0000546 name: delayed protein modification def: "A cellular process phenotype in which protein modification is delayed." [PomBase:mah] synonym: "delayed protein/peptide modification" EXACT [PomBase:mah] synonym: "protein/peptide modification: delayed" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000329 ! abnormal protein modification intersection_of: PATO:0000502 intersection_of: inheres_in GO:0006464 created_by: midori creation_date: 2011-08-15T11:41:34Z [Term] id: FYPO:0000547 name: increased protein modification def: "A cellular process phenotype in which the occurrence of protein modification is increased." [PomBase:mah] synonym: "increased protein/peptide modification" EXACT [PomBase:mah] synonym: "protein/peptide modification: increased" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000329 ! abnormal protein modification intersection_of: PATO:0002051 intersection_of: inheres_in GO:0006464 created_by: midori creation_date: 2011-08-15T11:41:34Z [Term] id: FYPO:0000548 name: increased duration of protein modification def: "A cellular process phenotype in which the duration of protein modification processes is increased." [PomBase:mah] synonym: "increased duration protein/peptide modification" EXACT [PomBase:mah] synonym: "protein/peptide modification: increased duration" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000329 ! abnormal protein modification intersection_of: PATO:0000498 intersection_of: inheres_in GO:0006464 created_by: midori creation_date: 2011-08-15T11:41:34Z [Term] id: FYPO:0000549 name: normal protein modification def: "A cellular process phenotype in which protein modification is normal." [PomBase:mah] synonym: "normal protein/peptide modification" EXACT [PomBase:mah] synonym: "protein/peptide modification: normal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000627 ! normal cellular process intersection_of: PATO:0000001 intersection_of: inheres_in GO:0006464 intersection_of: qualifier PATO:0000461 created_by: midori creation_date: 2011-08-15T11:41:34Z [Term] id: FYPO:0000550 name: abnormal pseudohyphal growth alt_id: FYPO:0000435 def: "A cellular process phenotype in which pseudohyphal growth is abnormal." [PomBase:mah] synonym: "abnormal filamentous growth" BROAD [PomBase:mah] synonym: "filamentous growth: abnormal" BROAD [SGD:phenotype_annotation] synonym: "pseudohyphal growth: abnormal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000045 ! abnormal cell growth intersection_of: PATO:0000001 intersection_of: inheres_in GO:0007124 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-08-15T11:41:34Z [Term] id: FYPO:0000551 name: pseudohyphal growth abolished alt_id: FYPO:0000436 def: "A cellular process phenotype in which pseudohyphal growth is abolished." [PomBase:mah] synonym: "absent filamentous growth" BROAD [PomBase:mah] synonym: "absent pseudohyphal growth" EXACT [PomBase:mah] synonym: "filamentous growth abolished" BROAD [PomBase:mah] synonym: "filamentous growth: absent" BROAD [SGD:phenotype_annotation] synonym: "pseudohyphal growth: absent" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000550 ! abnormal pseudohyphal growth intersection_of: PATO:0001508 intersection_of: inheres_in GO:0007124 created_by: midori creation_date: 2011-08-15T11:41:34Z [Term] id: FYPO:0000552 name: decreased pseudohyphal growth alt_id: FYPO:0000437 def: "A cellular process phenotype in which the occurrence of pseudohyphal growth is decreased." [PomBase:mah] synonym: "decreased filamentous growth" BROAD [PomBase:mah] synonym: "filamentous growth: decreased" BROAD [SGD:phenotype_annotation] synonym: "pseudohyphal growth: decreased" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000550 ! abnormal pseudohyphal growth intersection_of: PATO:0002052 intersection_of: inheres_in GO:0007124 created_by: midori creation_date: 2011-08-15T11:41:34Z [Term] id: FYPO:0000553 name: increased pseudohyphal growth alt_id: FYPO:0000438 def: "A cellular process phenotype in which the occurrence of pseudohyphal growth is increased." [PomBase:mah] synonym: "filamentous growth: increased" BROAD [SGD:phenotype_annotation] synonym: "increased filamentous growth" BROAD [PomBase:mah] synonym: "pseudohyphal growth: increased" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000550 ! abnormal pseudohyphal growth intersection_of: PATO:0002051 intersection_of: inheres_in GO:0007124 created_by: midori creation_date: 2011-08-15T11:41:34Z [Term] id: FYPO:0000554 name: normal pseudohyphal growth def: "A cellular process phenotype in which pseudohyphal growth is normal." [PomBase:mah] synonym: "pseudohyphal growth: normal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000439 ! normal filamentous growth intersection_of: PATO:0000001 intersection_of: inheres_in GO:0007124 intersection_of: qualifier PATO:0000461 created_by: midori creation_date: 2011-08-15T11:41:34Z [Term] id: FYPO:0000555 name: abnormal re-entry into mitotic cell cycle after pheromone arrest def: "A cellular process phenotype in which re-entry into the mitotic cell cycle after pheromone arrest is abnormal." [PomBase:mah] synonym: "abnormal recovery from pheromone-induced cell cycle arrest" EXACT [PomBase:mah] synonym: "recovery from pheromone-induced cell cycle arrest: abnormal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000145 ! regulation phenotype is_a: FYPO:0000302 ! abnormal response to pheromone intersection_of: PATO:0000001 intersection_of: inheres_in GO:0000321 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-08-15T11:41:34Z [Term] id: FYPO:0000556 name: re-entry into mitotic cell cycle after pheromone arrest abolished def: "A cellular process phenotype in which re-entry into the mitotic cell cycle after pheromone arrest is abolished." [PomBase:mah] synonym: "absent recovery from pheromone-induced cell cycle arrest" EXACT [PomBase:mah] synonym: "recovery from pheromone-induced cell cycle arrest abolished" EXACT [PomBase:mah] synonym: "recovery from pheromone-induced cell cycle arrest: absent" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000555 ! abnormal re-entry into mitotic cell cycle after pheromone arrest intersection_of: PATO:0001508 intersection_of: inheres_in GO:0000321 created_by: midori creation_date: 2011-08-15T11:41:34Z [Term] id: FYPO:0000557 name: decreased re-entry into mitotic cell cycle after pheromone arrest def: "A cellular process phenotype in which the occurrence of re-entry into the mitotic cell cycle after pheromone arrest is decreased." [PomBase:mah] synonym: "decreased recovery from pheromone-induced cell cycle arrest" EXACT [PomBase:mah] synonym: "recovery from pheromone-induced cell cycle arrest: decreased" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000555 ! abnormal re-entry into mitotic cell cycle after pheromone arrest intersection_of: PATO:0002052 intersection_of: inheres_in GO:0000321 created_by: midori creation_date: 2011-08-15T11:41:34Z [Term] id: FYPO:0000558 name: increased re-entry into mitotic cell cycle after pheromone arrest def: "A cellular process phenotype in which the occurrence of re-entry into the mitotic cell cycle after pheromone arrest is increased." [PomBase:mah] synonym: "increased recovery from pheromone-induced cell cycle arrest" EXACT [PomBase:mah] synonym: "recovery from pheromone-induced cell cycle arrest: increased" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000555 ! abnormal re-entry into mitotic cell cycle after pheromone arrest intersection_of: PATO:0002051 intersection_of: inheres_in GO:0000321 created_by: midori creation_date: 2011-08-15T11:41:34Z [Term] id: FYPO:0000559 name: increased rate of re-entry into mitotic cell cycle after pheromone arrest def: "A cellular process phenotype in which the rate of re-entry into the mitotic cell cycle after pheromone arrest is increased." [PomBase:mah] synonym: "increased rate of recovery from pheromone-induced cell cycle arrest" EXACT [PomBase:mah] synonym: "recovery from pheromone-induced cell cycle arrest: increased rate" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000555 ! abnormal re-entry into mitotic cell cycle after pheromone arrest intersection_of: PATO:0000912 intersection_of: inheres_in GO:0000321 created_by: midori creation_date: 2011-08-15T11:41:34Z [Term] id: FYPO:0000560 name: normal re-entry into mitotic cell cycle after pheromone arrest def: "A cellular process phenotype in which re-entry into the mitotic cell cycle after pheromone arrest is normal." [PomBase:mah] synonym: "normal recovery from pheromone-induced cell cycle arrest" EXACT [PomBase:mah] synonym: "recovery from pheromone-induced cell cycle arrest: normal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000627 ! normal cellular process intersection_of: PATO:0000001 intersection_of: PATO:0000587 intersection_of: inheres_in GO:0000321 intersection_of: qualifier PATO:0000461 created_by: midori creation_date: 2011-08-15T11:41:34Z [Term] id: FYPO:0000561 name: normal mitotic G1 phase progression def: "A cellular process phenotype in which progression through the G1 phase of the mitotic cell cycle is normal." [PomBase:mah] synonym: "mitotic cell cycle progression in G1 phase: normal" EXACT [SGD:phenotype_annotation] synonym: "normal mitotic cell cycle progression in G1" EXACT [PomBase:mah] is_a: FYPO:0000627 ! normal cellular process intersection_of: PATO:0000001 intersection_of: inheres_in GO:0000080 intersection_of: qualifier PATO:0000461 created_by: midori creation_date: 2011-08-16T10:03:01Z [Term] id: FYPO:0000562 name: cellular respiration abolished def: "A cellular process phenotype in which cellular respiration is abolished." [PomBase:mah] synonym: "absent respiratory metabolism" EXACT [PomBase:mah] synonym: "respiration abolished" BROAD [PomBase:mah] synonym: "respiratory metabolism abolished" EXACT [PomBase:mah] synonym: "respiratory metabolism: absent" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000078 ! abnormal cellular respiration intersection_of: PATO:0001508 intersection_of: inheres_in GO:0045333 created_by: midori creation_date: 2011-08-15T11:41:34Z [Term] id: FYPO:0000563 name: abnormal mitotic G2 phase progression def: "A cellular process phenotype in which progression through the G2 phase of the mitotic cell cycle is abnormal." [PomBase:mah] synonym: "abnormal mitotic cell cycle progression in G2" EXACT [PomBase:mah] synonym: "mitotic cell cycle progression in G2 phase: abnormal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000059 ! abnormal mitotic cell cycle progression intersection_of: PATO:0000001 intersection_of: inheres_in GO:0000085 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-08-16T10:03:01Z [Term] id: FYPO:0000564 name: decreased rate of cellular respiration def: "A cellular process phenotype in which the rate of cellular respiration is decreased." [PomBase:mah] synonym: "decreased rate of respiration" BROAD [PomBase:mah] synonym: "decreased rate of respiratory metabolism" EXACT [PomBase:mah] synonym: "respiratory metabolism: decreased rate" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000078 ! abnormal cellular respiration is_a: FYPO:0000628 ! abnormal cellular process intersection_of: PATO:0000911 intersection_of: inheres_in GO:0045333 created_by: midori creation_date: 2011-08-15T11:41:34Z [Term] id: FYPO:0000565 name: increased cellular respiration def: "A cellular process phenotype in which the occurrence of cellular respiration is increased." [PomBase:mah] synonym: "increased respiration" BROAD [PomBase:mah] synonym: "increased respiratory metabolism" EXACT [PomBase:mah] synonym: "respiratory metabolism: increased" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000078 ! abnormal cellular respiration intersection_of: PATO:0002051 intersection_of: inheres_in GO:0045333 created_by: midori creation_date: 2011-08-15T11:41:34Z [Term] id: FYPO:0000566 name: normal cellular respiration def: "A cellular process phenotype in which cellular respiration is normal." [PomBase:mah] synonym: "normal respiration" BROAD [PomBase:mah] synonym: "normal respiratory metabolism" EXACT [PomBase:mah] synonym: "respiratory metabolism: normal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000627 ! normal cellular process intersection_of: PATO:0000001 intersection_of: inheres_in GO:0045333 intersection_of: qualifier PATO:0000461 created_by: midori creation_date: 2011-08-15T11:41:34Z [Term] id: FYPO:0000567 name: decreased septation def: "A cellular process phenotype in which the occurrence of septation is decreased." [PomBase:mah] synonym: "decreased barrier septum formation involved in cell cycle cytokinesis" EXACT [PomBase:mah] synonym: "decreased septum formation" BROAD [PomBase:mah] synonym: "septum formation: decreased" BROAD [SGD:phenotype_annotation] is_a: FYPO:0000117 ! abnormal septation intersection_of: PATO:0002052 intersection_of: inheres_in GO:0071937 created_by: midori creation_date: 2011-08-15T11:41:34Z [Term] id: FYPO:0000568 name: abnormal shmoo formation def: "A cellular process phenotype in which mating projection assembly is abnormal." [PomBase:mah] synonym: "abnormal mating projection assembly" EXACT [PomBase:mah] synonym: "abnormal mating projection formation" EXACT [PomBase:mah] synonym: "abnormal shmoo assembly" EXACT [PomBase:mah] synonym: "shmoo formation: abnormal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000336 ! abnormal cellular component assembly intersection_of: PATO:0000001 intersection_of: inheres_in GO:0031382 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-08-15T11:41:34Z [Term] id: FYPO:0000569 name: shmoo formation abolished def: "A cellular process phenotype in which mating projection assembly is abolished." [PomBase:mah] synonym: "absent shmoo formation" EXACT [PomBase:mah] synonym: "mating projection assembly abolished" EXACT [PomBase:mah] synonym: "mating projection formation abolished" EXACT [PomBase:mah] synonym: "shmoo assembly abolished" EXACT [PomBase:mah] synonym: "shmoo formation: absent" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000568 ! abnormal shmoo formation intersection_of: PATO:0001508 intersection_of: inheres_in GO:0031382 created_by: midori creation_date: 2011-08-15T11:41:34Z [Term] id: FYPO:0000570 name: decreased shmoo formation def: "A cellular process phenotype in which the occurrence of mating projection assembly is decreased." [PomBase:mah] synonym: "decreased mating projection assembly" EXACT [PomBase:mah] synonym: "decreased mating projection formation" EXACT [PomBase:mah] synonym: "decreased shmoo assembly" EXACT [PomBase:mah] synonym: "shmoo formation: decreased" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000568 ! abnormal shmoo formation intersection_of: PATO:0002052 intersection_of: inheres_in GO:0031382 created_by: midori creation_date: 2011-08-15T11:41:34Z [Term] id: FYPO:0000571 name: decreased rate of shmoo formation def: "A cellular process phenotype in which the rate of mating projection assembly is decreased." [PomBase:mah] synonym: "decreased rate of mating projection assembly" EXACT [PomBase:mah] synonym: "decreased rate of mating projection formation" EXACT [PomBase:mah] synonym: "decreased rate of shmoo assembly" EXACT [PomBase:mah] synonym: "shmoo formation: decreased rate" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000568 ! abnormal shmoo formation intersection_of: PATO:0000911 intersection_of: inheres_in GO:0031382 created_by: midori creation_date: 2011-08-15T11:41:34Z [Term] id: FYPO:0000572 name: increased rate of shmoo formation def: "A cellular process phenotype in which the rate of mating projection assembly is increased." [PomBase:mah] synonym: "increased rate of mating projection assembly" EXACT [PomBase:mah] synonym: "increased rate of mating projection formation" EXACT [PomBase:mah] synonym: "increased rate of shmoo assembly" EXACT [PomBase:mah] synonym: "shmoo formation: increased rate" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000568 ! abnormal shmoo formation intersection_of: PATO:0000912 intersection_of: inheres_in GO:0031382 created_by: midori creation_date: 2011-08-15T11:41:34Z [Term] id: FYPO:0000573 name: normal shmoo formation def: "A cellular process phenotype in which mating projection assembly is normal." [PomBase:mah] synonym: "normal mating projection assembly" EXACT [PomBase:mah] synonym: "normal mating projection formation" EXACT [PomBase:mah] synonym: "normal shmoo assembly" EXACT [PomBase:mah] synonym: "shmoo formation: normal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000627 ! normal cellular process intersection_of: PATO:0000001 intersection_of: inheres_in GO:0031382 intersection_of: qualifier PATO:0000461 created_by: midori creation_date: 2011-08-15T11:41:34Z [Term] id: FYPO:0000574 name: abnormal gene silencing def: "A cellular process phenotype in which gene silencing is abnormal." [PomBase:mah] synonym: "silencing: abnormal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000288 ! gene expression regulation phenotype intersection_of: PATO:0000001 intersection_of: inheres_in GO:0016458 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-08-15T11:41:34Z [Term] id: FYPO:0000575 name: gene silencing abolished def: "A cellular process phenotype in which gene silencing is abolished." [PomBase:mah] synonym: "absent silencing" EXACT [PomBase:mah] synonym: "silencing: absent" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000574 ! abnormal gene silencing intersection_of: PATO:0001508 intersection_of: inheres_in GO:0016458 created_by: midori creation_date: 2011-08-15T11:41:34Z [Term] id: FYPO:0000576 name: decreased gene silencing def: "A cellular process phenotype in which the occurrence of gene silencing is decreased." [PomBase:mah] synonym: "silencing: decreased" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000574 ! abnormal gene silencing intersection_of: PATO:0002052 intersection_of: inheres_in GO:0016458 created_by: midori creation_date: 2011-08-15T11:41:34Z [Term] id: FYPO:0000577 name: increased gene silencing def: "A cellular process phenotype in which the occurrence of gene silencing is increased." [PomBase:mah] synonym: "silencing: increased" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000574 ! abnormal gene silencing intersection_of: PATO:0002051 intersection_of: inheres_in GO:0016458 created_by: midori creation_date: 2011-08-15T11:41:34Z [Term] id: FYPO:0000578 name: normal gene silencing def: "A cellular process phenotype in which gene silencing is normal." [PomBase:mah] synonym: "silencing: normal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000627 ! normal cellular process intersection_of: PATO:0000001 intersection_of: inheres_in GO:0016458 intersection_of: qualifier PATO:0000461 created_by: midori creation_date: 2011-08-15T11:41:34Z [Term] id: FYPO:0000579 name: normal spore germination def: "A cellular process phenotype in which spore germination is normal." [PomBase:mah] synonym: "spore germination: normal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000627 ! normal cellular process intersection_of: PATO:0000001 intersection_of: inheres_in GO:0009847 intersection_of: qualifier PATO:0000461 created_by: midori creation_date: 2011-08-15T11:41:34Z [Term] id: FYPO:0000580 name: abnormal ascospore wall biogenesis def: "A cellular process phenotype in which ascospore wall biogenesis is abnormal." [PomBase:mah] synonym: "abnormal spore wall formation" RELATED [PomBase:mah] synonym: "spore wall formation: abnormal" RELATED [SGD:phenotype_annotation] is_a: FYPO:0000174 ! abnormal cell wall biogenesis intersection_of: PATO:0000001 intersection_of: inheres_in GO:0070591 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-08-15T11:41:34Z [Term] id: FYPO:0000581 name: decreased spore germination def: "A cellular process phenotype in which the occurrence of spore germination is decreased." [PomBase:mah] synonym: "spore germination: decreased" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000305 ! abnormal spore germination intersection_of: PATO:0002052 intersection_of: inheres_in GO:0009847 created_by: midori creation_date: 2011-08-15T11:41:34Z [Term] id: FYPO:0000582 name: decreased rate of spore germination def: "A cellular process phenotype in which the rate of spore germination is decreased." [PomBase:mah] synonym: "spore germination: decreased rate" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000305 ! abnormal spore germination intersection_of: PATO:0000911 intersection_of: inheres_in GO:0009847 created_by: midori creation_date: 2011-08-15T11:41:34Z [Term] id: FYPO:0000583 name: sporulation abolished def: "A cellular process phenotype in which ascospore formation is abolished." [PomBase:mah] synonym: "absent sporulation" EXACT [PomBase:mah] synonym: "ascospore formation abolished" EXACT [PomBase:mah] synonym: "sporulation: absent" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000121 ! abnormal sporulation intersection_of: PATO:0001508 intersection_of: inheres_in GO:0030437 created_by: midori creation_date: 2011-08-15T12:00:20Z [Term] id: FYPO:0000584 name: decreased sporulation def: "A cellular process phenotype in which the occurrence of ascospore formation is decreased." [PomBase:mah] synonym: "decreased ascospore formation" EXACT [PomBase:mah] synonym: "sporulation: decreased" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000121 ! abnormal sporulation intersection_of: PATO:0002052 intersection_of: inheres_in GO:0030437 created_by: midori creation_date: 2011-08-15T12:00:20Z [Term] id: FYPO:0000585 name: ascospore wall biogenesis abolished def: "A cellular process phenotype in which ascospore wall biogenesis is abolished." [PomBase:mah] synonym: "absent spore wall formation" RELATED [PomBase:mah] synonym: "spore wall formation abolished" RELATED [PomBase:mah] synonym: "spore wall formation: absent" RELATED [SGD:phenotype_annotation] is_a: FYPO:0000580 ! abnormal ascospore wall biogenesis intersection_of: PATO:0000001 intersection_of: PATO:0001508 intersection_of: inheres_in GO:0070591 created_by: midori creation_date: 2011-08-15T12:00:20Z [Term] id: FYPO:0000586 name: ascospore wall assembly abolished def: "A cellular process phenotype in which ascospore wall assembly is abolished." [PomBase:mah] synonym: "absent spore wall formation" RELATED [PomBase:mah] synonym: "spore wall formation abolished" RELATED [PomBase:mah] synonym: "spore wall formation: absent" RELATED [SGD:phenotype_annotation] is_a: FYPO:0000175 ! abnormal ascospore wall assembly intersection_of: PATO:0000001 intersection_of: PATO:0001508 intersection_of: inheres_in GO:0030476 created_by: midori creation_date: 2011-08-15T12:00:20Z [Term] id: FYPO:0000587 name: delayed sporulation def: "A cellular process phenotype in which ascospore formation is delayed." [PomBase:mah] synonym: "delayed ascospore formation" EXACT [PomBase:mah] synonym: "sporulation: delayed" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000121 ! abnormal sporulation intersection_of: PATO:0000502 intersection_of: inheres_in GO:0030437 created_by: midori creation_date: 2011-08-15T12:00:20Z [Term] id: FYPO:0000588 name: increased sporulation def: "A cellular process phenotype in which the occurrence of ascospore formation is increased." [PomBase:mah] synonym: "increased ascospore formation" EXACT [PomBase:mah] synonym: "sporulation: increased" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000121 ! abnormal sporulation intersection_of: PATO:0002051 intersection_of: inheres_in GO:0030437 created_by: midori creation_date: 2011-08-15T12:00:20Z [Term] id: FYPO:0000589 name: increased rate of sporulation def: "A cellular process phenotype in which the rate of ascospore formation is increased." [PomBase:mah] synonym: "increased rate of ascospore formation" EXACT [PomBase:mah] synonym: "sporulation: increased rate" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000121 ! abnormal sporulation intersection_of: PATO:0000912 intersection_of: inheres_in GO:0030437 created_by: midori creation_date: 2011-08-15T12:00:20Z [Term] id: FYPO:0000590 name: normal sporulation def: "A cellular process phenotype in which ascospore formation is normal." [PomBase:mah] synonym: "normal ascospore formation" EXACT [PomBase:mah] synonym: "sporulation: normal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000627 ! normal cellular process intersection_of: PATO:0000001 intersection_of: inheres_in GO:0030437 intersection_of: qualifier PATO:0000461 created_by: midori creation_date: 2011-08-15T12:00:20Z [Term] id: FYPO:0000591 name: abnormal transposition def: "A cellular process phenotype in which transposition is abnormal." [PomBase:mah] synonym: "abnormal transposable element transposition" EXACT [PomBase:mah] synonym: "transposable element transposition: abnormal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000628 ! abnormal cellular process intersection_of: PATO:0000001 intersection_of: inheres_in GO:0032196 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-08-15T12:00:20Z [Term] id: FYPO:0000592 name: transposition abolished def: "A cellular process phenotype in which transposition is abolished." [PomBase:mah] synonym: "absent transposable element transposition" EXACT [PomBase:mah] synonym: "transposable element transposition abolished" EXACT [PomBase:mah] synonym: "transposable element transposition: absent" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000591 ! abnormal transposition intersection_of: PATO:0000001 intersection_of: PATO:0001508 intersection_of: inheres_in GO:0032196 created_by: midori creation_date: 2011-08-15T12:00:20Z [Term] id: FYPO:0000593 name: decreased transposition def: "A cellular process phenotype in which the occurrence of transposition is decreased." [PomBase:mah] synonym: "decreased transposable element transposition" EXACT [PomBase:mah] synonym: "transposable element transposition: decreased" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000591 ! abnormal transposition intersection_of: PATO:0002052 intersection_of: inheres_in GO:0032196 created_by: midori creation_date: 2011-08-15T12:00:20Z [Term] id: FYPO:0000594 name: increased transposition def: "A cellular process phenotype in which the occurrence of transposition is increased." [PomBase:mah] synonym: "increased transposable element transposition" EXACT [PomBase:mah] synonym: "transposable element transposition: increased" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000591 ! abnormal transposition intersection_of: PATO:0002051 intersection_of: inheres_in GO:0032196 created_by: midori creation_date: 2011-08-15T12:00:20Z [Term] id: FYPO:0000595 name: increased rate of transposition def: "A cellular process phenotype in which the rate of transposition is increased." [PomBase:mah] synonym: "increased rate of transposable element transposition" EXACT [PomBase:mah] synonym: "transposable element transposition: increased rate" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000591 ! abnormal transposition intersection_of: PATO:0000912 intersection_of: inheres_in GO:0032196 created_by: midori creation_date: 2011-08-15T12:00:20Z [Term] id: FYPO:0000596 name: normal transposition def: "A cellular process phenotype in which transposition is normal." [PomBase:mah] synonym: "normal transposable element transposition" EXACT [PomBase:mah] synonym: "transposable element transposition: normal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000627 ! normal cellular process intersection_of: PATO:0000001 intersection_of: inheres_in GO:0032196 intersection_of: qualifier PATO:0000461 created_by: midori creation_date: 2011-08-15T12:00:20Z [Term] id: FYPO:0000597 name: abnormal vacuolar transport def: "A cellular process phenotype in which vacuolar transport is abnormal." [PomBase:mah] synonym: "vacuolar transport: abnormal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000149 ! transport phenotype intersection_of: PATO:0000001 intersection_of: inheres_in GO:0007034 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-08-15T12:00:20Z [Term] id: FYPO:0000598 name: decreased vacuolar transport def: "A cellular process phenotype in which the occurrence of vacuolar transport is decreased." [PomBase:mah] synonym: "vacuolar transport: decreased" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000464 ! decreased intracellular transport is_a: FYPO:0000597 ! abnormal vacuolar transport intersection_of: PATO:0002052 intersection_of: inheres_in GO:0007034 created_by: midori creation_date: 2011-08-15T12:00:20Z [Term] id: FYPO:0000599 name: decreased rate of vacuolar transport def: "A cellular process phenotype in which the rate of vacuolar transport is decreased." [PomBase:mah] synonym: "vacuolar transport: decreased rate" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000597 ! abnormal vacuolar transport intersection_of: PATO:0000911 intersection_of: inheres_in GO:0007034 created_by: midori creation_date: 2011-08-15T12:00:20Z [Term] id: FYPO:0000600 name: delayed vacuolar transport def: "A cellular process phenotype in which vacuolar transport is delayed." [PomBase:mah] synonym: "vacuolar transport: delayed" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000597 ! abnormal vacuolar transport intersection_of: PATO:0000502 intersection_of: inheres_in GO:0007034 created_by: midori creation_date: 2011-08-15T12:00:20Z [Term] id: FYPO:0000601 name: normal vacuolar transport def: "A cellular process phenotype in which vacuolar transport is normal." [PomBase:mah] synonym: "vacuolar transport: normal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000627 ! normal cellular process intersection_of: PATO:0000001 intersection_of: inheres_in GO:0007034 intersection_of: qualifier PATO:0000461 created_by: midori creation_date: 2011-08-15T12:00:20Z [Term] id: FYPO:0000602 name: abnormal mitotic G1 phase progression def: "A cellular process phenotype in which progression through the G1 phase of the mitotic cell cycle is abnormal." [PomBase:mah] synonym: "abnormal mitotic cell cycle progression in G1" EXACT [PomBase:mah] synonym: "mitotic cell cycle progression in G1 phase: abnormal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000059 ! abnormal mitotic cell cycle progression intersection_of: PATO:0000001 intersection_of: inheres_in GO:0000080 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-08-15T12:00:20Z [Term] id: FYPO:0000603 name: decreased duration of mitotic G1 phase def: "A cellular process phenotype in which the duration of G1 phase of a mitotic cell cycle is shorter than normal." [PomBase:mah] synonym: "mitotic cell cycle progression in G1 phase: decreased duration" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000602 ! abnormal mitotic G1 phase progression intersection_of: PATO:0000499 intersection_of: inheres_in GO:0000080 created_by: midori creation_date: 2011-08-15T12:00:20Z [Term] id: FYPO:0000604 name: decreased rate of mitotic G2 phase progression def: "A cellular process phenotype in which progression through the G2 phase of the mitotic cell cycle proceeds at a slower rate than normal." [PomBase:mah] synonym: "mitotic cell cycle progression in G2 phase: decreased rate" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000408 ! decreased rate of cell cycle progression is_a: FYPO:0000563 ! abnormal mitotic G2 phase progression intersection_of: PATO:0000911 intersection_of: inheres_in GO:0000085 created_by: midori creation_date: 2011-08-16T10:03:01Z [Term] id: FYPO:0000605 name: delayed mitotic G2 phase progression def: "A cellular process phenotype in which progression through the G2 phase of the mitotic cell cycle is delayed." [PomBase:mah] synonym: "mitotic cell cycle progression in G2 phase: delayed" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000409 ! delayed cell cycle progression is_a: FYPO:0000563 ! abnormal mitotic G2 phase progression intersection_of: PATO:0000502 intersection_of: inheres_in GO:0000085 created_by: midori creation_date: 2011-08-16T10:03:01Z [Term] id: FYPO:0000607 name: abnormal mitotic M phase progression def: "A cellular process phenotype in which progression through M phase of the mitotic cell cycle is abnormal." [PomBase:mah] synonym: "abnormal mitotic cell cycle progression in M" EXACT [PomBase:mah] synonym: "mitotic cell cycle progression in M phase: abnormal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000059 ! abnormal mitotic cell cycle progression intersection_of: PATO:0000001 intersection_of: inheres_in GO:0000087 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-08-16T10:03:01Z [Term] id: FYPO:0000608 name: mitotic cell cycle arrest in M phase def: "A cellular process phenotype in which progression through the mitotic cell cycle is arrested in M phase." [PomBase:mah] synonym: "mitotic cell cycle progression in M phase: arrested" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000502 ! arrested mitotic cell cycle is_a: FYPO:0000607 ! abnormal mitotic M phase progression intersection_of: PATO:0000297 intersection_of: inheres_in GO:0000087 created_by: midori creation_date: 2011-08-16T10:03:01Z [Term] id: FYPO:0000609 name: delayed mitotic M phase progression def: "A cellular process phenotype in which progression through M phase of the mitotic cell cycle is delayed." [PomBase:mah] synonym: "mitotic cell cycle progression in M phase: delayed" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000409 ! delayed cell cycle progression is_a: FYPO:0000607 ! abnormal mitotic M phase progression intersection_of: PATO:0000502 intersection_of: inheres_in GO:0000087 created_by: midori creation_date: 2011-08-16T10:03:01Z [Term] id: FYPO:0000610 name: abnormal mitotic S phase progression def: "A cellular process phenotype in which progression through S phase of the mitotic cell cycle is abnormal." [PomBase:mah] synonym: "abnormal mitotic cell cycle progression in S" EXACT [PomBase:mah] synonym: "mitotic cell cycle progression in S phase: abnormal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000059 ! abnormal mitotic cell cycle progression intersection_of: PATO:0000001 intersection_of: inheres_in GO:0000084 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-08-16T10:03:01Z [Term] id: FYPO:0000611 name: mitotic cell cycle arrest in S phase def: "A cellular process phenotype in which progression through the mitotic cell cycle is arrested in S phase." [PomBase:mah] synonym: "mitotic cell cycle progression in S phase: arrested" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000502 ! arrested mitotic cell cycle is_a: FYPO:0000610 ! abnormal mitotic S phase progression intersection_of: PATO:0000297 intersection_of: inheres_in GO:0000084 created_by: midori creation_date: 2011-08-16T10:03:01Z [Term] id: FYPO:0000612 name: decreased rate of mitotic S phase progression def: "A cellular process phenotype in which progression through S phase of the mitotic cell cycle proceeds at a slower rate than normal." [PomBase:mah] synonym: "mitotic cell cycle progression in S phase: decreased rate" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000408 ! decreased rate of cell cycle progression is_a: FYPO:0000610 ! abnormal mitotic S phase progression intersection_of: PATO:0000911 intersection_of: inheres_in GO:0000084 created_by: midori creation_date: 2011-08-16T10:03:01Z [Term] id: FYPO:0000613 name: delayed mitotic S phase progression def: "A cellular process phenotype in which progression through S phase of the mitotic cell cycle is delayed." [PomBase:mah] synonym: "mitotic cell cycle progression in S phase: delayed" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000409 ! delayed cell cycle progression is_a: FYPO:0000610 ! abnormal mitotic S phase progression intersection_of: PATO:0000502 intersection_of: inheres_in GO:0000084 created_by: midori creation_date: 2011-08-16T10:03:01Z [Term] id: FYPO:0000614 name: increased duration of mitotic S phase def: "A cellular process phenotype in which the duration of progression through S phase of the mitotic cell cycle is longer than normal." [PomBase:mah] synonym: "mitotic cell cycle progression in S phase: increased duration" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000610 ! abnormal mitotic S phase progression intersection_of: PATO:0000498 intersection_of: inheres_in GO:0000084 created_by: midori creation_date: 2011-08-16T10:03:01Z [Term] id: FYPO:0000615 name: increased rate of mitotic S phase progression def: "A cellular process phenotype in which progression through S phase of the mitotic cell cycle proceeds at a faster rate than normal." [PomBase:mah] synonym: "mitotic cell cycle progression in S phase: increased rate" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000610 ! abnormal mitotic S phase progression intersection_of: PATO:0000912 intersection_of: inheres_in GO:0000084 created_by: midori creation_date: 2011-08-16T10:03:01Z [Term] id: FYPO:0000616 name: abnormal mitotic anaphase progression def: "A cellular process phenotype in which progression through mitotic anaphase is abnormal." [PomBase:mah] synonym: "abnormal mitotic cell cycle progression in anaphase" EXACT [PomBase:mah] synonym: "mitotic cell cycle progression in anaphase: abnormal" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000607 ! abnormal mitotic M phase progression intersection_of: PATO:0000001 intersection_of: inheres_in GO:0000090 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-08-16T10:03:01Z [Term] id: FYPO:0000617 name: delayed mitotic anaphase progression def: "A cellular process phenotype in which progression through anaphase of mitosis is delayed." [PomBase:mah] synonym: "mitotic cell cycle progression in anaphase: delayed" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000609 ! delayed mitotic M phase progression is_a: FYPO:0000616 ! abnormal mitotic anaphase progression intersection_of: PATO:0000502 intersection_of: inheres_in GO:0000090 created_by: midori creation_date: 2011-08-16T10:03:01Z [Term] id: FYPO:0000618 name: increased duration of mitotic anaphase def: "A cellular process phenotype in which the duration of progression through the anaphase of mitosis is longer than normal." [PomBase:mah] synonym: "mitotic cell cycle progression in anaphase: increased duration" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000616 ! abnormal mitotic anaphase progression intersection_of: PATO:0000498 intersection_of: inheres_in GO:0000090 created_by: midori creation_date: 2011-08-16T10:03:01Z [Term] id: FYPO:0000619 name: mitotic cell cycle arrest in late anaphase def: "A cellular process phenotype in which progression through the mitotic cell cycle is arrested in late anaphase." [PomBase:mah] synonym: "mitotic cell cycle progression in late anaphase: arrested" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000502 ! arrested mitotic cell cycle intersection_of: PATO:0000297 intersection_of: inheres_in GO:0000090 created_by: midori creation_date: 2011-08-16T10:03:01Z [Term] id: FYPO:0000620 name: mitotic cell cycle arrest in metaphase def: "A cellular process phenotype in which progression through the mitotic cell cycle is arrested in metaphase." [PomBase:mah] synonym: "mitotic cell cycle progression in metaphase: arrested" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000502 ! arrested mitotic cell cycle intersection_of: PATO:0000297 intersection_of: inheres_in GO:0000089 created_by: midori creation_date: 2011-08-16T10:03:01Z [Term] id: FYPO:0000621 name: delayed mitotic metaphase def: "A cellular process phenotype in which progression through metaphase of mitosis is delayed." [PomBase:mah] synonym: "mitotic cell cycle progression in metaphase: delayed" EXACT [SGD:phenotype_annotation] synonym: "mitotic metaphase delay" EXACT [PomBase:mah] is_a: FYPO:0000609 ! delayed mitotic M phase progression intersection_of: PATO:0000502 intersection_of: inheres_in GO:0000089 created_by: midori creation_date: 2011-08-16T10:03:01Z [Term] id: FYPO:0000622 name: mitotic cell cycle arrest in telophase def: "A cellular process phenotype in which progression through the mitotic cell cycle is arrested in telophase." [PomBase:mah] synonym: "mitotic cell cycle progression in telophase: arrested" EXACT [SGD:phenotype_annotation] is_a: FYPO:0000502 ! arrested mitotic cell cycle intersection_of: PATO:0000297 intersection_of: inheres_in GO:0000093 created_by: midori creation_date: 2011-08-16T10:03:01Z [Term] id: FYPO:0000623 name: abnormal positive regulation of transcription def: "A transcription regulation phenotype in which any process of positive regulation of transcription is abnormal." [PomBase:mah] synonym: "abnormal activation of gene-specific transcription" RELATED [GO:0045893, PomBase:mah] synonym: "abnormal activation of transcription, DNA-dependent" NARROW [GO:0045893, PomBase:mah] synonym: "abnormal positive regulation of cellular transcription, DNA-dependent" EXACT [GO:0045893, PomBase:mah] synonym: "abnormal positive regulation of gene-specific transcription" RELATED [GO:0045893, PomBase:mah] synonym: "abnormal positive regulation of transcription, DNA-dependent" EXACT [GO:0045893, PomBase:mah] synonym: "abnormal stimulation of gene-specific transcription" NARROW [GO:0045893, PomBase:mah] synonym: "abnormal stimulation of transcription, DNA-dependent" NARROW [GO:0045893, PomBase:mah] synonym: "abnormal up regulation of gene-specific transcription" RELATED [GO:0045893, PomBase:mah] synonym: "abnormal up regulation of transcription, DNA-dependent" EXACT [GO:0045893, PomBase:mah] synonym: "abnormal up-regulation of gene-specific transcription" RELATED [GO:0045893, PomBase:mah] synonym: "abnormal up-regulation of transcription, DNA-dependent" EXACT [GO:0045893, PomBase:mah] synonym: "abnormal upregulation of gene-specific transcription" RELATED [GO:0045893, PomBase:mah] synonym: "abnormal upregulation of transcription, DNA-dependent" EXACT [GO:0045893, PomBase:mah] is_a: FYPO:0000143 ! transcription regulation phenotype intersection_of: PATO:0000001 intersection_of: inheres_in GO:0045893 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-08-19T03:38:05Z [Term] id: FYPO:0000624 name: abnormal negative regulation of transcription def: "A transcription regulation phenotype in which any process of negative regulation of transcription is abnormal." [PomBase:mah] synonym: "abnormal down regulation of gene-specific transcription" RELATED [GO:0045892, PomBase:mah] synonym: "abnormal down regulation of transcription, DNA-dependent" EXACT [GO:0045892, PomBase:mah] synonym: "abnormal down-regulation of gene-specific transcription" RELATED [GO:0045892, PomBase:mah] synonym: "abnormal down-regulation of transcription, DNA-dependent" EXACT [GO:0045892, PomBase:mah] synonym: "abnormal downregulation of gene-specific transcription" RELATED [GO:0045892, PomBase:mah] synonym: "abnormal downregulation of transcription, DNA-dependent" EXACT [GO:0045892, PomBase:mah] synonym: "abnormal inhibition of gene-specific transcription" RELATED [GO:0045892, PomBase:mah] synonym: "abnormal inhibition of transcription, DNA-dependent" NARROW [GO:0045892, PomBase:mah] synonym: "abnormal negative regulation of cellular transcription, DNA-dependent" EXACT [GO:0045892, PomBase:mah] synonym: "abnormal negative regulation of gene-specific transcription" RELATED [GO:0045892, PomBase:mah] synonym: "abnormal negative regulation of transcription, DNA-dependent" EXACT [GO:0045892, PomBase:mah] is_a: FYPO:0000143 ! transcription regulation phenotype intersection_of: PATO:0000001 intersection_of: inheres_in GO:0045892 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-08-19T03:40:47Z [Term] id: FYPO:0000625 name: abnormal premeiotic DNA replication def: "A cellular process phenotype in which premeiotic DNA replication is abnormal." [PomBase:mah] synonym: "abnormal meiotic DNA replication" RELATED [GO:0006279, GOC:mah] synonym: "abnormal meiotic DNA synthesis" RELATED [GO:0006279, GOC:mah] synonym: "abnormal premeiotic DNA synthesis" RELATED [GO:0006279, GOC:mah] is_a: FYPO:0000217 ! abnormal DNA replication intersection_of: PATO:0000001 intersection_of: inheres_in GO:0006279 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-08-19T03:48:13Z [Term] id: FYPO:0000626 name: abnormal initiation of premeiotic DNA replication def: "A cellular process phenotype in which the initiation of premeiotic DNA replication is abnormal." [PomBase:mah] synonym: "abnormal initiation of meiotic DNA synthesis" RELATED [GO:0072691, GOC:mah] synonym: "abnormal initiation of premeiotic DNA synthesis" RELATED [GO:0072691, GOC:mah] synonym: "abnormal meiotic DNA replication initiation" RELATED [GO:0072691, GOC:mah] synonym: "abnormal premeiotic DNA replication initiation" EXACT [GO:0072691, GOC:mah] is_a: FYPO:0000176 ! abnormal DNA replication initiation is_a: FYPO:0000625 ! abnormal premeiotic DNA replication intersection_of: PATO:0000001 intersection_of: inheres_in GO:0072691 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-08-19T03:49:02Z [Term] id: FYPO:0000627 name: normal cellular process def: "A phenotype in which a specific cellular process is normal." [PomBase:mah] is_a: FYPO:0000114 ! cellular process phenotype is_a: FYPO:0000257 ! normal phenotype intersection_of: PATO:0000001 intersection_of: inheres_in GO:0009987 intersection_of: qualifier PATO:0000461 created_by: midori creation_date: 2011-08-19T04:05:16Z [Term] id: FYPO:0000628 name: abnormal cellular process def: "A phenotype in which a specific cellular process is abnormal." [PomBase:mah] is_a: FYPO:0000114 ! cellular process phenotype intersection_of: PATO:0000001 intersection_of: inheres_in GO:0009987 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-08-19T04:06:34Z [Term] id: FYPO:0000629 name: abnormal apoptosis def: "A cellular process phenotype in which apoptosis is abnormal." [PomBase:mah] is_a: FYPO:0000628 ! abnormal cellular process intersection_of: PATO:0000001 intersection_of: inheres_in GO:0006915 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-08-19T04:10:09Z [Term] id: FYPO:0000630 name: abnormal biofilm formation def: "A cellular process phenotype in which biofilm formation is abnormal." [PomBase:mah] is_a: FYPO:0000628 ! abnormal cellular process intersection_of: PATO:0000001 intersection_of: inheres_in GO:0042710 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-08-19T04:12:58Z [Term] id: FYPO:0000631 name: cell cycle phenotype def: "A cellular process phenotype that affects progression of the mitotic or meiotic cell cycle, or regulation of cell cycle progression." [PomBase:mah] synonym: "cell-division cycle phenotype" EXACT [GO:0007049, PomBase:mah] is_a: FYPO:0000114 ! cellular process phenotype intersection_of: FYPO:0000001 ! phenotype intersection_of: inheres_in GO:0007049 created_by: midori creation_date: 2011-08-19T04:16:04Z [Term] id: FYPO:0000632 name: mitochondrial translation phenotype def: "A cellular process phenotype that affects mitochondrial translation." [PomBase:mah] is_a: FYPO:0000291 ! translation phenotype intersection_of: FYPO:0000002 ! cell phenotype intersection_of: inheres_in GO:0032543 created_by: midori creation_date: 2011-08-23T04:58:17Z [Term] id: FYPO:0000633 name: sensitive to G418 def: "A phenotype in which cells show increased sensitivity to G418." [PomBase:mah] synonym: "sensitive to Geneticin" EXACT [CHEBI:459363, PomBase:al] is_a: FYPO:0000127 ! increased sensitivity to chemical intersection_of: PATO:0001551 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:459363 created_by: midori creation_date: 2011-08-23T04:58:25Z [Term] id: FYPO:0000634 name: protein localization to centromere abolished def: "A cell phenotype in which the localization of a protein to the centromere of a chromosome is abolished." [PomBase:mah] synonym: "protein localisation to centromere abolished" EXACT [PomBase:mah] synonym: "protein localisation to chromosome, centromeric region, abolished" EXACT [GO:0071459, PomBase:mah] synonym: "protein localization to chromosome, centric region, abolished" EXACT [GO:0071459, PomBase:mah] synonym: "protein localization to chromosome, centromeric region, abolished" EXACT [GO:0071459, PomBase:mah] is_a: FYPO:0000443 ! abnormal protein localization intersection_of: inheres_in GO:0071459 intersection_of: qualifier PATO:0001508 created_by: midori creation_date: 2011-08-23T04:58:31Z [Term] id: FYPO:0000635 name: growth auxotrophic for leucine def: "Auxotrophy in which leucine is required for cell growth." [PomBase:mah] is_a: FYPO:0000128 ! auxotrophy intersection_of: PATO:0000422 intersection_of: towards CHEBI:15603 created_by: midori creation_date: 2011-08-23T05:17:07Z [Term] id: FYPO:0000636 name: increased cell growth rate def: "A cellular process phenotype in which cell growth is faster than normal." [PomBase:mah] synonym: "enhanced cell growth" RELATED [PomBase:mah] synonym: "fast cell growth" EXACT [PomBase:mah] is_a: FYPO:0000045 ! abnormal cell growth intersection_of: PATO:0000912 intersection_of: inheres_in GO:0016049 created_by: midori creation_date: 2011-08-31T01:30:12Z [Term] id: FYPO:0000637 name: increased cell growth rate on glucose carbon source def: "A cell growth phenotype in which cells grow at a faster rate than normal in a medium containing glucose as the carbon source." [PomBase:mah] synonym: "enhanced growth on glucose" RELATED [PomBase:mah] synonym: "fast cell growth on glucose carbon source" EXACT [PomBase:mah] is_a: FYPO:0000636 ! increased cell growth rate intersection_of: FYPO:0000046 ! slow cell growth intersection_of: inheres_in BTO:0000316 intersection_of: qualifier PATO:0000467 intersection_of: towards CHEBI:17634 created_by: midori creation_date: 2011-08-31T02:20:29Z [Term] id: FYPO:0000639 name: delayed septation def: "A cellular process phenotype in which septation takes place later than normal." [PomBase:al, PomBase:mah] synonym: "delayed barrier septum formation involved in cell cycle cytokinesis" EXACT [PomBase:mah] synonym: "delayed septum formation" BROAD [PomBase:mah] is_a: FYPO:0000117 ! abnormal septation intersection_of: PATO:0000502 intersection_of: inheres_in GO:0071937 created_by: midori creation_date: 2011-08-31T02:55:54Z [Term] id: FYPO:0000640 name: abnormal chromatin silencing at centromere central core def: "A transcription regulation phenotype in which chromatin silencing at the central core of the centromeric regions is abnormal." [PomBase:mah] comment: Note that the centromere central core corresponds to SO:0001796. synonym: "abnormal centromere central core chromatin silencing" EXACT [PomBase:mah] synonym: "abnormal chromatin silencing at centromeric central core" EXACT [PomBase:mah] synonym: "abnormal heterochromatic silencing at centromere central core" EXACT [PomBase:mah] is_a: FYPO:0000144 ! abnormal chromatin silencing intersection_of: PATO:0000001 intersection_of: inheres_in GO:0072692 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-09-12T03:33:40Z [Term] id: FYPO:0000641 name: abnormal chromosome organization def: "A cellular process phenotype in which any process of chromosome organization is abnormal." [PomBase:mah] synonym: "abnormal chromosome organisation" EXACT [PomBase:mah] is_a: FYPO:0000335 ! abnormal cellular component organization intersection_of: PATO:0000001 intersection_of: inheres_in GO:0051276 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-09-28T12:10:13Z [Term] id: FYPO:0000642 name: abnormal chromatin organization def: "A cellular process phenotype in which any process of chromatin organization is abnormal." [PomBase:mah] synonym: "abnormal chromatin organisation" EXACT [PomBase:mah] is_a: FYPO:0000641 ! abnormal chromosome organization intersection_of: PATO:0000001 intersection_of: inheres_in GO:0006324 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-09-28T12:16:57Z [Term] id: FYPO:0000643 name: abnormal DNA integrity checkpoint def: "A cell cycle checkpoint phenotype that affects any DNA integrity checkpoint." [PomBase:mah] is_a: FYPO:0000137 ! cell cycle checkpoint phenotype intersection_of: PATO:0000001 intersection_of: inheres_in GO:0031570 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-09-28T12:28:26Z [Term] id: FYPO:0000644 name: normal protein localization def: "A cellular process phenotype in which cellular protein localization is normal." [PomBase:mah] synonym: "normal cellular protein localization" EXACT [PomBase:mah] synonym: "normal protein localisation" EXACT [PomBase:mah] is_a: FYPO:0000138 ! localization phenotype is_a: FYPO:0000627 ! normal cellular process intersection_of: PATO:0000001 intersection_of: inheres_in GO:0034613 intersection_of: qualifier PATO:0000461 created_by: midori creation_date: 2011-10-05T04:52:48Z [Term] id: FYPO:0000645 name: small vegetative cells def: "A cell morphology phenotype in which vegetatively growing cells have an abnormally low volume." [PomBase:mah] is_a: FYPO:0000023 ! small cells intersection_of: PATO:0000596 intersection_of: during GO:0072690 intersection_of: inheres_in CL:0000596 created_by: midori creation_date: 2011-10-07T02:03:07Z [Term] id: FYPO:0000646 name: swollen vegetative cells def: "A cell morphology phenotype in which a vegetatively growing cell has a larger volume than normal." [PomBase:mah] is_a: FYPO:0000025 ! swollen cells created_by: midori creation_date: 2011-10-07T04:19:54Z [Term] id: FYPO:0000647 name: cell lysis def: "An inviable phenotype in which cells lyse, i.e. the plasma membrane ruptures and cytoplasm is lost. Note that in fission yeast cell lysis, the integrity of the cell wall is also compromised." [PomBase:mah] synonym: "cytolysis" EXACT [PomBase:mah] synonym: "inviable, lysed cells" EXACT [PomBase:mah] is_a: FYPO:0000049 ! inviable intersection_of: PATO:0002051 intersection_of: inheres_in GO:0019835 created_by: midori creation_date: 2011-10-10T03:28:02Z [Term] id: FYPO:0000648 name: small viable vegetative cells def: "A cell morphology phenotype in which vegetatively growing cells are viable but have an abnormally low volume. Note that small viable cells result from a cell cycle size regulation defect." [PomBase:mah] synonym: "wee" EXACT [PomBase:jh, PomBase:mah] is_a: FYPO:0000124 ! viable is_a: FYPO:0000645 ! small vegetative cells created_by: midori creation_date: 2011-10-13T12:06:45Z [Term] id: FYPO:0000649 name: increased septation def: "A cellular process phenotype in which the occurrence of septation is increased." [PomBase:mah] synonym: "increased barrier septum formation involved in cell cycle cytokinesis" EXACT [PomBase:mah] synonym: "increased septum formation" BROAD [PomBase:mah] is_a: FYPO:0000117 ! abnormal septation intersection_of: PATO:0002051 intersection_of: inheres_in GO:0071937 created_by: midori creation_date: 2011-10-13T12:33:47Z [Term] id: FYPO:0000650 name: increased septation index def: "A cell population phenotype in which the septation index is higher than normal. The septation index is the proportion of the population undergoing septation at any given time, and is usually around 10% (varying between 7-15%) for wild type." [PomBase:mah, PomBase:vw] is_a: FYPO:0000003 ! cell population phenotype relationship: includes_cells_with_phenotype FYPO:0000651 ! increased duration of septation created_by: midori creation_date: 2011-10-13T12:34:42Z [Term] id: FYPO:0000651 name: increased duration of septation def: "A cellular process phenotype in which the duration of septation is increased." [PomBase:mah] synonym: "increased duration of barrier septum formation involved in cell cycle cytokinesis" EXACT [PomBase:mah] synonym: "increased duration of septum formation" BROAD [PomBase:mah] is_a: FYPO:0000117 ! abnormal septation intersection_of: PATO:0000498 intersection_of: inheres_in GO:0071937 created_by: midori creation_date: 2011-10-13T03:07:53Z [Term] id: FYPO:0000652 name: molecular function phenotype def: "A phenotype that affects a molecular function such as binding or catalytic activity." [PomBase:mah] is_a: FYPO:0000001 ! phenotype intersection_of: FYPO:0000001 ! phenotype intersection_of: inheres_in GO:0003674 created_by: midori creation_date: 2011-11-11T10:42:36Z [Term] id: FYPO:0000653 name: DNA binding phenotype def: "A phenotype that affects DNA binding." [PomBase:mah] is_a: FYPO:0000652 ! molecular function phenotype intersection_of: FYPO:0000001 ! phenotype intersection_of: inheres_in GO:0003677 created_by: midori creation_date: 2011-11-11T10:43:39Z [Term] id: FYPO:0000654 name: catalytic activity phenotype def: "A phenotype that affects a catalytic activity." [PomBase:mah] synonym: "enzymatic activity phenotype" EXACT [PomBase:mah] is_a: FYPO:0000652 ! molecular function phenotype intersection_of: FYPO:0000001 ! phenotype intersection_of: inheres_in GO:0003824 created_by: midori creation_date: 2011-11-11T10:44:09Z [Term] id: FYPO:0000655 name: normal DNA binding def: "A molecular function phenotype in which occurrence of DNA binding by a mutated gene product is normal." [PomBase:mah] is_a: FYPO:0000653 ! DNA binding phenotype is_a: FYPO:0000706 ! normal molecular function intersection_of: PATO:0000001 intersection_of: inheres_in GO:0003677 intersection_of: qualifier PATO:0000461 created_by: midori creation_date: 2011-11-11T10:45:30Z [Term] id: FYPO:0000656 name: abnormal DNA binding def: "A molecular function phenotype in which occurrence of DNA binding by a mutated gene product is abnormal." [PomBase:mah] is_a: FYPO:0000653 ! DNA binding phenotype is_a: FYPO:0000707 ! abnormal molecular function intersection_of: PATO:0000001 intersection_of: inheres_in GO:0003677 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-11-11T10:45:30Z [Term] id: FYPO:0000657 name: increased DNA binding def: "A molecular function phenotype in which occurrence of DNA binding by a mutated gene product is increased." [PomBase:mah] is_a: FYPO:0000656 ! abnormal DNA binding intersection_of: PATO:0002051 intersection_of: inheres_in GO:0003677 created_by: midori creation_date: 2011-11-11T10:45:30Z [Term] id: FYPO:0000658 name: decreased DNA binding def: "A molecular function phenotype in which occurrence of DNA binding by a mutated gene product is decreased." [PomBase:mah] is_a: FYPO:0000656 ! abnormal DNA binding intersection_of: PATO:0002052 intersection_of: inheres_in GO:0003677 created_by: midori creation_date: 2011-11-11T10:45:30Z [Term] id: FYPO:0000659 name: abolished DNA binding def: "A molecular function phenotype in which occurrence of DNA binding by a mutated gene product is abolished." [PomBase:mah] is_a: FYPO:0000656 ! abnormal DNA binding intersection_of: PATO:0001508 intersection_of: inheres_in GO:0003677 created_by: midori creation_date: 2011-11-11T10:45:30Z [Term] id: FYPO:0000660 name: normal catalytic activity def: "A molecular function phenotype in which a the observed rate of a specified catalytic activity is normal." [PomBase:mah] is_a: FYPO:0000654 ! catalytic activity phenotype is_a: FYPO:0000706 ! normal molecular function intersection_of: PATO:0000001 intersection_of: inheres_in GO:0003824 intersection_of: qualifier PATO:0000461 created_by: midori creation_date: 2011-11-11T10:46:28Z [Term] id: FYPO:0000661 name: abnormal catalytic activity def: "A molecular function phenotype in which a the observed rate of a specified catalytic activity is abnormal." [PomBase:mah] is_a: FYPO:0000654 ! catalytic activity phenotype is_a: FYPO:0000707 ! abnormal molecular function intersection_of: PATO:0000001 intersection_of: inheres_in GO:0003824 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-11-11T10:46:28Z [Term] id: FYPO:0000662 name: increased catalytic activity def: "A molecular function phenotype in which a the observed rate of a specified catalytic activity is increased." [PomBase:mah] is_a: FYPO:0000661 ! abnormal catalytic activity intersection_of: PATO:0002051 intersection_of: inheres_in GO:0003824 created_by: midori creation_date: 2011-11-11T10:46:28Z [Term] id: FYPO:0000663 name: decreased catalytic activity def: "A molecular function phenotype in which a the observed rate of a specified catalytic activity is decreased." [PomBase:mah] is_a: FYPO:0000661 ! abnormal catalytic activity intersection_of: PATO:0002052 intersection_of: inheres_in GO:0003824 created_by: midori creation_date: 2011-11-11T10:46:28Z [Term] id: FYPO:0000664 name: abolished catalytic activity def: "A molecular function phenotype in which a specified catalytic activity is abolished." [PomBase:mah] is_a: FYPO:0000661 ! abnormal catalytic activity intersection_of: PATO:0001508 intersection_of: inheres_in GO:0003824 created_by: midori creation_date: 2011-11-11T10:46:28Z [Term] id: FYPO:0000665 name: normal peptidase activity def: "A molecular function phenotype in which the observed rate of a peptidase activity is normal." [PomBase:mah] is_a: FYPO:0000660 ! normal catalytic activity intersection_of: PATO:0000001 intersection_of: inheres_in GO:0008233 intersection_of: qualifier PATO:0000461 created_by: midori creation_date: 2011-11-11T10:46:47Z [Term] id: FYPO:0000666 name: abnormal peptidase activity def: "A molecular function phenotype in which the observed rate of a peptidase activity is abnormal." [PomBase:mah] synonym: "abnormal protease activity" EXACT [PomBase:mah] is_a: FYPO:0000661 ! abnormal catalytic activity intersection_of: PATO:0000001 intersection_of: inheres_in GO:0008233 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-11-11T10:46:47Z [Term] id: FYPO:0000667 name: increased peptidase activity def: "A molecular function phenotype in which the observed rate of a peptidase activity is increased." [PomBase:mah] synonym: "increased peptidase activity" EXACT [PomBase:mah] is_a: FYPO:0000662 ! increased catalytic activity is_a: FYPO:0000666 ! abnormal peptidase activity intersection_of: PATO:0002051 intersection_of: inheres_in GO:0008233 created_by: midori creation_date: 2011-11-11T10:46:47Z [Term] id: FYPO:0000668 name: decreased peptidase activity def: "A molecular function phenotype in which the observed rate of a peptidase activity is decreased." [PomBase:mah] synonym: "decreased peptidase activity" EXACT [PomBase:mah] is_a: FYPO:0000663 ! decreased catalytic activity is_a: FYPO:0000666 ! abnormal peptidase activity intersection_of: PATO:0002052 intersection_of: inheres_in GO:0008233 created_by: midori creation_date: 2011-11-11T10:46:47Z [Term] id: FYPO:0000669 name: abolished peptidase activity def: "A molecular function phenotype in which a peptidase activity is abolished." [PomBase:mah] synonym: "abolished protease activity" EXACT [PomBase:mah] is_a: FYPO:0000664 ! abolished catalytic activity is_a: FYPO:0000666 ! abnormal peptidase activity intersection_of: PATO:0001508 intersection_of: inheres_in GO:0008233 created_by: midori creation_date: 2011-11-11T10:46:47Z [Term] id: FYPO:0000670 name: abnormal chromosome separation def: "A cellular process phenotype in which chromosome separation is abnormal." [PomBase:mah] is_a: FYPO:0000029 ! abnormal chromosome segregation intersection_of: PATO:0000001 intersection_of: inheres_in GO:0051304 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-11-11T01:51:59Z [Term] id: FYPO:0000671 name: abnormal rDNA separation def: "A cellular process phenotype in which chromosome separation at the rDNA repeat regions is abnormal." [PomBase:mah] synonym: "abnormal segregation of nucleolar rDNA" RELATED [PomBase:mah] is_a: FYPO:0000670 ! abnormal chromosome separation intersection_of: PATO:0000001 intersection_of: inheres_in GO:0034500 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-11-11T01:59:59Z [Term] id: FYPO:0000672 name: normal cell morphology def: "A cell phenotype characterized by normal cell morphology." [PomBase:mah] is_a: FYPO:0000136 ! cellular structure phenotype is_a: FYPO:0000257 ! normal phenotype created_by: midori creation_date: 2011-11-11T02:51:12Z [Term] id: FYPO:0000673 name: normal septation def: "A cellular process phenotype in which septation is normal." [PomBase:mah] is_a: FYPO:0000627 ! normal cellular process intersection_of: PATO:0000001 intersection_of: inheres_in GO:0071937 intersection_of: qualifier PATO:0000461 created_by: midori creation_date: 2011-11-11T02:53:07Z [Term] id: FYPO:0000674 name: normal growth at high temperature def: "A cell growth phenotype in which cells grow at normal rate at a high temperature." [PomBase:mah] is_a: FYPO:0000047 ! normal cell growth intersection_of: FYPO:0000047 ! normal cell growth intersection_of: inheres_in BTO:0000316 intersection_of: qualifier PATO:0001305 created_by: midori creation_date: 2011-11-11T02:55:04Z [Term] id: FYPO:0000675 name: abnormal protein targeting def: "A transport phenotype in which protein targeting is abnormal." [PomBase:mah] is_a: FYPO:0000215 ! abnormal intracellular protein transport intersection_of: PATO:0000001 intersection_of: inheres_in GO:0006605 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-11-11T03:24:12Z [Term] id: FYPO:0000676 name: abnormal protein targeting to vacuole def: "A transport phenotype in which protein targeting to the vacuole is abnormal." [PomBase:mah] synonym: "abnormal vacuolar protein sorting" EXACT [PomBase:mah] is_a: FYPO:0000675 ! abnormal protein targeting intersection_of: PATO:0000001 intersection_of: inheres_in GO:0006623 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-11-11T03:25:01Z [Term] id: FYPO:0000677 name: abnormal protein targeting to prospore membrane def: "A transport phenotype in which protein targeting to the prospore membrane is abnormal." [PomBase:mah] is_a: FYPO:0000675 ! abnormal protein targeting intersection_of: PATO:0000001 intersection_of: inheres_in GO:0072693 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-11-29T05:16:27Z [Term] id: FYPO:0000678 name: chromosome nondisjunction at meiosis I def: "A cellular process phenotype in which homologous chromosomes fail to segregate properly, or disjoin, during meiosis I." [PomBase:mah] is_a: FYPO:0000151 ! abnormal meiotic chromosome segregation intersection_of: inheres_in GO:0045143 intersection_of: qualifier PATO:0001558 created_by: midori creation_date: 2011-11-29T05:44:25Z [Term] id: FYPO:0000679 name: developmental process phenotype def: "A phenotype that affects a developmental process." [PomBase:mah] is_a: FYPO:0000300 ! biological process phenotype intersection_of: FYPO:0000001 ! phenotype intersection_of: inheres_in GO:0032502 created_by: midori creation_date: 2011-11-29T06:02:16Z [Term] id: FYPO:0000680 name: abnormal ascus development def: "A developmental process phenotype in which ascus development is abnormal." [PomBase:mah] is_a: FYPO:0000679 ! developmental process phenotype intersection_of: PATO:0000001 intersection_of: inheres_in GO:0075317 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-11-29T06:03:31Z [Term] id: FYPO:0000681 name: abnormal ascus development resulting in formation of two-spore ascus def: "A developmental process phenotype in which ascus development results in the formation of an ascus that has abnormal morphology and contains two diploid spores." [PMID:11156975, PomBase:mah, PomBase:vw] is_a: FYPO:0000680 ! abnormal ascus development created_by: midori creation_date: 2011-12-01T01:29:02Z [Term] id: FYPO:0000682 name: abnormal regulation of molecular function def: "A regulation phenotype in which regulation of a molecular function is abnormal." [PomBase:mah] is_a: FYPO:0000145 ! regulation phenotype intersection_of: PATO:0000001 intersection_of: inheres_in GO:0065009 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-12-01T01:43:05Z [Term] id: FYPO:0000683 name: constitutive catalytic activity def: "A regulation phenotype in which the basal activity of an enzyme is increased relative to normal. Basal enzyme activity is the activity observed in the absence of a regulator. Abnormally elevated basal activity may or may not reach the levels observed in the normal activated state." [PomBase:al, PomBase:mah] synonym: "constitutive enzymatic activity" EXACT [PomBase:mah] synonym: "constitutively active enzyme" RELATED [PomBase:mah] is_a: FYPO:0000682 ! abnormal regulation of molecular function created_by: midori creation_date: 2011-12-01T01:51:53Z [Term] id: FYPO:0000684 name: slow cell growth on glycerol carbon source def: "A cell growth phenotype in which cells grow at a slower rate than normal in a medium containing glycerol as the carbon source." [PomBase:al, PomBase:mah] comment: Note that trace amounts of another carbon source are usually required for S. pombe growth on glycerol; yeast extract-based rich medium supplies the trace substance, but minimal medium must be supplemented. It is therefore important to annotate the growth medium as an experimental condition when using this term. is_a: FYPO:0000046 ! slow cell growth intersection_of: FYPO:0000046 ! slow cell growth intersection_of: inheres_in BTO:0000316 intersection_of: qualifier PATO:0000467 intersection_of: towards CHEBI:17754 created_by: midori creation_date: 2011-12-01T04:41:03Z [Term] id: FYPO:0000685 name: increased transcriptional response to pheromone def: "A cellular response phenotype in which pheromone-responsive positive regulation of transcription occurs at a lower level of pheromone than normal." [PomBase:mah] synonym: "increased sensitivity of positive regulation of transcription from RNA polymerase II promoter by pheromones to pheromone" EXACT [PomBase:mah] synonym: "sensitive to pheromone" RELATED [PomBase:al, PomBase:mah] is_a: FYPO:0000302 ! abnormal response to pheromone is_a: FYPO:0000623 ! abnormal positive regulation of transcription intersection_of: PATO:0001551 intersection_of: inheres_in GO:0007329 created_by: midori creation_date: 2011-12-01T04:46:17Z [Term] id: FYPO:0000686 name: normal peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity def: "A molecular function phenotype in which the observed rate of peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity is normal." [PomBase:mah] is_a: FYPO:0000660 ! normal catalytic activity intersection_of: PATO:0000001 intersection_of: inheres_in GO:0000224 intersection_of: qualifier PATO:0000461 created_by: midori creation_date: 2011-12-01T05:15:00Z [Term] id: FYPO:0000687 name: abnormal peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity def: "A molecular function phenotype in which the observed rate of peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity is abnormal." [PomBase:mah] is_a: FYPO:0000661 ! abnormal catalytic activity intersection_of: PATO:0000001 intersection_of: inheres_in GO:0000224 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-12-01T05:15:00Z [Term] id: FYPO:0000688 name: decreased peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity def: "A molecular function phenotype in which the observed rate of peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity is decreased." [PomBase:mah] is_a: FYPO:0000687 ! abnormal peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity intersection_of: PATO:0002052 intersection_of: inheres_in GO:0000224 created_by: midori creation_date: 2011-12-01T05:15:00Z [Term] id: FYPO:0000689 name: abnormal oxidoreductase activity def: "A molecular function phenotype in which the observed rate of an oxidoreductase activity is abnormal." [PomBase:mah] is_a: FYPO:0000661 ! abnormal catalytic activity intersection_of: PATO:0000001 intersection_of: inheres_in GO:0016491 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-12-01T05:15:00Z [Term] id: FYPO:0000690 name: decreased oxidoreductase activity def: "A molecular function phenotype in which the observed rate of an oxidoreductase activity is decreased." [PomBase:mah] is_a: FYPO:0000663 ! decreased catalytic activity is_a: FYPO:0000689 ! abnormal oxidoreductase activity intersection_of: PATO:0002052 intersection_of: inheres_in GO:0016491 created_by: midori creation_date: 2011-12-01T05:15:00Z [Term] id: FYPO:0000691 name: normal DNA-1,N6-ethenoadenine N-glycosylase activity def: "A molecular function phenotype in which the observed rate of DNA-1,N6-ethenoadenine N-glycosylase activity is normal." [PomBase:mah] is_a: FYPO:0000660 ! normal catalytic activity intersection_of: PATO:0000001 intersection_of: inheres_in GO:0052820 intersection_of: qualifier PATO:0000461 created_by: midori creation_date: 2011-12-01T05:15:00Z [Term] id: FYPO:0000692 name: abnormal DNA-1,N6-ethenoadenine N-glycosylase activity def: "A molecular function phenotype in which the observed rate of DNA-1,N6-ethenoadenine N-glycosylase activity is abnormal." [PomBase:mah] is_a: FYPO:0000661 ! abnormal catalytic activity intersection_of: PATO:0000001 intersection_of: inheres_in GO:0052820 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-12-01T05:15:00Z [Term] id: FYPO:0000693 name: decreased DNA-1,N6-ethenoadenine N-glycosylase activity def: "A molecular function phenotype in which the observed rate of DNA-1,N6-ethenoadenine N-glycosylase activity is decreased." [PomBase:mah] synonym: "reduced DNA-1,N6-ethenoadenine N-glycosylase activity" EXACT [PomBase:al] is_a: FYPO:0000663 ! decreased catalytic activity is_a: FYPO:0000692 ! abnormal DNA-1,N6-ethenoadenine N-glycosylase activity intersection_of: PATO:0002052 intersection_of: inheres_in GO:0052820 created_by: midori creation_date: 2011-12-01T05:15:00Z [Term] id: FYPO:0000694 name: abolished DNA-1,N6-ethenoadenine N-glycosylase activity def: "A molecular function phenotype in which DNA-1,N6-ethenoadenine N-glycosylase activity is abolished." [PomBase:mah] is_a: FYPO:0000664 ! abolished catalytic activity is_a: FYPO:0000692 ! abnormal DNA-1,N6-ethenoadenine N-glycosylase activity intersection_of: PATO:0001508 intersection_of: inheres_in GO:0052820 created_by: midori creation_date: 2011-12-01T05:15:00Z [Term] id: FYPO:0000695 name: increased DNA-1,N6-ethenoadenine N-glycosylase activity def: "A molecular function phenotype in which the observed rate of DNA-1,N6-ethenoadenine N-glycosylase activity is increased." [PomBase:mah] is_a: FYPO:0000662 ! increased catalytic activity is_a: FYPO:0000692 ! abnormal DNA-1,N6-ethenoadenine N-glycosylase activity intersection_of: PATO:0002051 intersection_of: inheres_in GO:0052820 created_by: midori creation_date: 2011-12-01T05:15:00Z [Term] id: FYPO:0000696 name: normal DNA-7-methylguanine glycosylase activity def: "A molecular function phenotype in which the observed rate of DNA-7-methylguanine glycosylase activity is normal." [PomBase:mah] is_a: FYPO:0000660 ! normal catalytic activity intersection_of: PATO:0000001 intersection_of: inheres_in GO:0043916 intersection_of: qualifier PATO:0000461 created_by: midori creation_date: 2011-12-01T05:15:00Z [Term] id: FYPO:0000697 name: abnormal DNA-7-methylguanine glycosylase activity def: "A molecular function phenotype in which the observed rate of DNA-7-methylguanine glycosylase activity is abnormal." [PomBase:mah] is_a: FYPO:0000661 ! abnormal catalytic activity intersection_of: PATO:0000001 intersection_of: inheres_in GO:0043916 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-12-01T05:15:00Z [Term] id: FYPO:0000698 name: decreased DNA-7-methylguanine glycosylase activity def: "A molecular function phenotype in which the observed rate of DNA-7-methylguanine glycosylase activity is decreased." [PomBase:mah] synonym: "reduced DNA-7-methylguanine glycosylase activity" EXACT [PomBase:al] is_a: FYPO:0000663 ! decreased catalytic activity is_a: FYPO:0000697 ! abnormal DNA-7-methylguanine glycosylase activity intersection_of: PATO:0002052 intersection_of: inheres_in GO:00043916 created_by: midori creation_date: 2011-12-01T05:15:00Z [Term] id: FYPO:0000699 name: abolished DNA-7-methylguanine glycosylase activity def: "A molecular function phenotype in which DNA-7-methylguanine glycosylase activity is abolished." [PomBase:mah] is_a: FYPO:0000664 ! abolished catalytic activity is_a: FYPO:0000697 ! abnormal DNA-7-methylguanine glycosylase activity intersection_of: PATO:0001508 intersection_of: inheres_in GO:00043916 created_by: midori creation_date: 2011-12-01T05:15:00Z [Term] id: FYPO:0000700 name: increased DNA-7-methylguanine glycosylase activity def: "A molecular function phenotype in which the observed rate of DNA-7-methylguanine glycosylase activity is increased." [PomBase:mah] is_a: FYPO:0000662 ! increased catalytic activity is_a: FYPO:0000697 ! abnormal DNA-7-methylguanine glycosylase activity intersection_of: PATO:0002051 intersection_of: inheres_in GO:00043916 created_by: midori creation_date: 2011-12-01T05:15:00Z [Term] id: FYPO:0000701 name: DNA damage checkpoint override in response to caffeine abolished def: "A cellular response phenotype in which caffeine does not override the DNA damage checkpoint (as it does in wild type cells), allowing cell cycle arrest to occur." [PMID:10224243, PomBase:mah] synonym: "caffeine-mediated DNA damage checkpoint override abolished" EXACT [GOC:mah, GOC:vw] is_a: FYPO:0000137 ! cell cycle checkpoint phenotype is_a: FYPO:0000207 ! abnormal cellular response to caffeine created_by: midori creation_date: 2011-12-05T01:59:12Z [Term] id: FYPO:0000702 name: protein binding phenotype def: "A phenotype that affects protein binding." [PomBase:mah] is_a: FYPO:0000652 ! molecular function phenotype intersection_of: FYPO:0000001 ! phenotype intersection_of: inheres_in GO:0005515 created_by: midori creation_date: 2011-12-05T02:24:49Z [Term] id: FYPO:0000703 name: normal protein binding def: "A molecular function phenotype in which occurrence of protein binding by a mutated gene product is normal." [PomBase:mah] is_a: FYPO:0000702 ! protein binding phenotype is_a: FYPO:0000706 ! normal molecular function intersection_of: PATO:0000001 intersection_of: inheres_in GO:0005515 intersection_of: qualifier PATO:0000461 created_by: midori creation_date: 2011-12-05T02:25:15Z [Term] id: FYPO:0000704 name: abnormal protein binding def: "A molecular function phenotype in which occurrence of protein binding by a mutated gene product is abnormal." [PomBase:mah] is_a: FYPO:0000702 ! protein binding phenotype is_a: FYPO:0000707 ! abnormal molecular function intersection_of: PATO:0000001 intersection_of: inheres_in GO:0005515 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-12-05T02:25:58Z [Term] id: FYPO:0000705 name: abolished protein binding def: "A molecular function phenotype in which occurrence of protein binding by a mutated gene product is abolished." [PomBase:mah] is_a: FYPO:0000704 ! abnormal protein binding intersection_of: PATO:0001508 intersection_of: inheres_in GO:0005515 created_by: midori creation_date: 2011-12-05T02:26:17Z [Term] id: FYPO:0000706 name: normal molecular function def: "A phenotype in which a specific molecular function is normal." [PomBase:mah] is_a: FYPO:0000257 ! normal phenotype is_a: FYPO:0000652 ! molecular function phenotype intersection_of: PATO:0000001 intersection_of: inheres_in GO:0003674 intersection_of: qualifier PATO:0000461 created_by: midori creation_date: 2011-12-05T03:06:23Z [Term] id: FYPO:0000707 name: abnormal molecular function def: "A phenotype in which a specific molecular function is abnormal." [PomBase:mah] is_a: FYPO:0000652 ! molecular function phenotype intersection_of: PATO:0000001 intersection_of: inheres_in GO:0003674 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-12-05T03:09:24Z [Term] id: FYPO:0000708 name: decreased mating efficiency def: "A biological process phenotype in which the observed mating efficiency is lower than normal." [PMID:15300681, PMID:16598689, PomBase:al, PomBase:mah] comment: Note that mating efficiency is often measured by counting zygotes plus asci, sometimes also including spores, so a change in measured mating efficiency may reflect a change in conjugation frequency (see FYPO:0000031 and its descendants), a change in sporulation (see FYPO:0000121 and its descendants), or both. For this reason, this term is not a child of 'mating phenotype' (FYPO:0000031). is_a: FYPO:0000300 ! biological process phenotype created_by: midori creation_date: 2011-12-05T04:26:20Z [Term] id: FYPO:0000709 name: slow cell growth upon nitrogen starvation def: "A cell growth phenotype in which cells grow more slowly than normal under nitrogen starvation conditions, such as in nitrogen-deficient minimal medium." [PomBase:mah] synonym: "slow cell growth in nitrogen-deficient minimal medium" RELATED [PomBase:al, PomBase:mah] synonym: "slow cell growth in response to nitrogen starvation" EXACT [PomBase:mah] is_a: FYPO:0000046 ! slow cell growth is_a: FYPO:0000152 ! abnormal cellular response to nitrogen starvation intersection_of: FYPO:0000046 ! slow cell growth intersection_of: during GO:0006995 created_by: midori creation_date: 2011-12-05T04:43:53Z [Term] id: FYPO:0000710 name: abnormal cell cycle arrest in response to nitrogen starvation def: "A cellular process phenotype in which cell cycle arrest in response to nitrogen starvation is abnormal." [PomBase:mah] is_a: FYPO:0000145 ! regulation phenotype is_a: FYPO:0000152 ! abnormal cellular response to nitrogen starvation is_a: FYPO:0000631 ! cell cycle phenotype intersection_of: PATO:0000001 intersection_of: inheres_in GO:0030996 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-12-06T12:15:03Z [Term] id: FYPO:0000711 name: decreased cell cycle arrest in response to nitrogen starvation def: "A cellular process phenotype in which the occurrence of cell cycle arrest in response to nitrogen starvation is decreased." [PomBase:mah] is_a: FYPO:0000710 ! abnormal cell cycle arrest in response to nitrogen starvation intersection_of: PATO:0002052 intersection_of: inheres_in GO:0030996 created_by: midori creation_date: 2011-12-06T12:15:32Z [Term] id: FYPO:0000712 name: delayed cell cycle arrest in response to nitrogen starvation def: "A cellular process phenotype in which the occurrence of cell cycle arrest in response to nitrogen starvation is delayed." [PomBase:mah] is_a: FYPO:0000710 ! abnormal cell cycle arrest in response to nitrogen starvation intersection_of: PATO:0000502 intersection_of: inheres_in GO:0030996 created_by: midori creation_date: 2011-12-06T12:16:53Z [Term] id: FYPO:0000713 name: abnormal cellular response to starvation is_a: FYPO:0000162 ! abnormal cellular response to stress intersection_of: PATO:0000001 intersection_of: inheres_in GO:0009267 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-12-06T12:25:40Z [Term] id: FYPO:0000714 name: sensitive to leptomycin B def: "A phenotype in which cells show increased sensitivity to leptomycin B." [PomBase:mah] is_a: FYPO:0000127 ! increased sensitivity to chemical intersection_of: PATO:0001551 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:52646 created_by: midori creation_date: 2011-12-06T12:31:38Z [Term] id: FYPO:0000715 name: sensitive to K-252a def: "A phenotype in which cells show increased sensitivity to K-252a." [PomBase:mah] is_a: FYPO:0000127 ! increased sensitivity to chemical intersection_of: PATO:0001551 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:135352 created_by: midori creation_date: 2011-12-06T12:31:38Z [Term] id: FYPO:0000716 name: sensitive to valinomycin def: "A phenotype in which cells show increased sensitivity to valinomycin." [PomBase:mah] is_a: FYPO:0000127 ! increased sensitivity to chemical intersection_of: PATO:0001551 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:469669 created_by: midori creation_date: 2011-12-06T12:31:38Z [Term] id: FYPO:0000717 name: sensitive to actinomycin D def: "A phenotype in which cells show increased sensitivity to actinomycin D." [PomBase:mah] is_a: FYPO:0000127 ! increased sensitivity to chemical intersection_of: PATO:0001551 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:27666 created_by: midori creation_date: 2011-12-06T12:31:38Z [Term] id: FYPO:0000718 name: sensitive to trisodium vanadate def: "A phenotype in which cells show increased sensitivity to trisodium vanadate (also known as sodium orthovanadate)." [PomBase:mah] synonym: "sensitive to sodium orthovanadate" EXACT [CHEBI:35607, PomBase:al] is_a: FYPO:0000127 ! increased sensitivity to chemical intersection_of: PATO:0001551 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:35607 created_by: midori creation_date: 2011-12-06T12:31:38Z [Term] id: FYPO:0000719 name: normal fatty acid synthase activity def: "A molecular function phenotype in which the observed rate of fatty acid synthase activity is normal." [PomBase:mah] synonym: "normal FAS activity" EXACT [PomBase:al, PomBase:mah] is_a: FYPO:0000660 ! normal catalytic activity intersection_of: PATO:0000001 intersection_of: inheres_in GO:0004312 intersection_of: qualifier PATO:0000461 created_by: midori creation_date: 2011-12-06T01:43:30Z [Term] id: FYPO:0000720 name: abnormal fatty acid synthase activity def: "A molecular function phenotype in which the observed rate of fatty acid synthase activity is abnormal." [PomBase:mah] synonym: "abnormal FAS activity" EXACT [PomBase:al, PomBase:mah] is_a: FYPO:0000661 ! abnormal catalytic activity intersection_of: PATO:0000001 intersection_of: inheres_in GO:0004312 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-12-06T01:57:58Z [Term] id: FYPO:0000721 name: abnormal cellular response to pH def: "A cellular response phenotype in which the cellular response to a pH stimulus is abnormal." [PomBase:mah] is_a: FYPO:0000298 ! cellular response phenotype intersection_of: PATO:0000001 intersection_of: inheres_in GO:0071467 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-12-06T02:45:18Z [Term] id: FYPO:0000722 name: sensitive to acidity def: "A cell phenotype in which cells show increased sensitivity to acidic pH (less than 7)." [PomBase:mah] is_a: FYPO:0000721 ! abnormal cellular response to pH intersection_of: PATO:0001551 intersection_of: inheres_in GO:0071468 created_by: midori creation_date: 2011-12-06T02:47:00Z [Term] id: FYPO:0000723 name: sensitive to alkalinity def: "A cell phenotype in which cells show increased sensitivity to alkaline pH (greater than 7)." [PomBase:mah] is_a: FYPO:0000721 ! abnormal cellular response to pH intersection_of: PATO:0001551 intersection_of: inheres_in GO:0071469 created_by: midori creation_date: 2011-12-06T02:48:18Z [Term] id: FYPO:0000724 name: resistance to N-methyl-N'-nitro-N-nitrosoguanidine def: "An increased chemical resistance phenotype in which cells grow in the presence of a higher concentration of N-methyl-N'-nitro-N-nitrosoguanidine than normal." [PomBase:mah] synonym: "resistance to methylnitronitrosoguanidine" EXACT [CHEBI:21759] synonym: "resistant to MNNG" EXACT [CHEBI:21759] synonym: "resistant to N-methyl-N'-nitro-N-nitrosoguanidine" EXACT [PomBase:mah] is_a: FYPO:0000126 ! increased resistance to chemical intersection_of: PATO:0001552 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:21759 created_by: midori creation_date: 2011-12-06T04:17:30Z [Term] id: FYPO:0000725 name: resistance to methyl methanesulfonate def: "An increased chemical resistance phenotype in which cells grow in the presence of a higher concentration of methyl methanesulfonate than normal." [PomBase:mah] synonym: "resistance to methyl methanesulphonate" EXACT [PomBase:mah] synonym: "resistance to MMS" EXACT [PomBase:mah] synonym: "resistant to methyl methanesulfonate" EXACT [PomBase:mah] is_a: FYPO:0000126 ! increased resistance to chemical intersection_of: PATO:0001552 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:25255 created_by: midori creation_date: 2011-12-07T11:28:32Z [Term] id: FYPO:0000726 name: sensitive to oxidative stress def: "A cell phenotype in which cells show increased sensitivity to oxidative stress." [PomBase:mah] is_a: FYPO:0000180 ! abnormal cellular response to oxidative stress is_a: FYPO:0000304 ! sensitive to stress intersection_of: PATO:0001551 intersection_of: inheres_in GO:0034599 created_by: midori creation_date: 2011-12-07T01:17:37Z [Term] id: FYPO:0000727 name: abnormal actin filament organization def: "A cytokinesis phenotype in which the assembly and distribution of cytoskeletal structures comprising actin filaments does not occur normally." [PomBase:mah] synonym: "abnormal actin filament organisation" EXACT [PomBase:mah] is_a: FYPO:0000296 ! actin cytoskeleton organization phenotype intersection_of: PATO:0000001 intersection_of: inheres_in GO:0007015 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-12-07T02:53:31Z [Term] id: FYPO:0000728 name: abnormal actin cortical patch assembly def: "A cellular process phenotype in which actin cortical patch assembly is abnormal." [PomBase:mah] is_a: FYPO:0000296 ! actin cytoskeleton organization phenotype is_a: FYPO:0000336 ! abnormal cellular component assembly intersection_of: PATO:0000001 intersection_of: inheres_in GO:0000147 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-12-07T03:02:33Z [Term] id: FYPO:0000729 name: delayed actomyosin contractile ring assembly def: "A cellular process phenotype in which contractile ring assembly is delayed." [PomBase:mah] synonym: "delayed contractile ring assembly" EXACT [PomBase:mah] is_a: FYPO:0000161 ! abnormal actomyosin contractile ring assembly intersection_of: PATO:0002052 intersection_of: inheres_in GO:0000915 created_by: midori creation_date: 2011-12-07T04:50:03Z [Term] id: FYPO:0000730 name: long spindle def: "A spindle phenotype in which the spindle is longer than normal." [PomBase:mah] synonym: "long spindles" EXACT [PomBase:mah] is_a: FYPO:0000120 ! abnormal spindle intersection_of: PATO:0000573 intersection_of: inheres_in GO:0005819 created_by: midori creation_date: 2011-12-07T04:51:57Z [Term] id: FYPO:0000731 name: abnormal protein localization to medial cortex def: "A cell phenotype in which the localization of a protein to the medial cortex is abnormal." [PomBase:mah] synonym: "abnormal protein localisation to medial cortex" EXACT [GO:0071168, PomBase:mah] is_a: FYPO:0000443 ! abnormal protein localization intersection_of: PATO:0000001 intersection_of: inheres_in GO:0071574 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2011-12-07T05:16:57Z [Term] id: FYPO:0000732 name: short mitotic spindle def: "A spindle phenotype in which the mitotic spindle is shorter than normal." [PomBase:mah] synonym: "short mitotic spindles" EXACT [PomBase:mah] is_a: FYPO:0000130 ! short spindle is_a: FYPO:0000338 ! abnormal mitotic spindle intersection_of: PATO:0000574 intersection_of: inheres_in GO:0072686 created_by: midori creation_date: 2012-01-11T11:30:01Z [Term] id: FYPO:0000733 name: long mitotic spindle def: "A spindle phenotype in which the mitotic spindle is longer than normal." [PomBase:mah] synonym: "long mitotic spindles" EXACT [PomBase:mah] is_a: FYPO:0000338 ! abnormal mitotic spindle is_a: FYPO:0000730 ! long spindle intersection_of: PATO:0000573 intersection_of: inheres_in GO:0072686 created_by: midori creation_date: 2012-01-11T11:30:01Z [Term] id: FYPO:0000734 name: abnormal meiotic spindle def: "A cellular structure phenotype in which the structure of the meiotic spindle is abnormal." [PomBase:mah] is_a: FYPO:0000120 ! abnormal spindle intersection_of: PATO:0000001 intersection_of: inheres_in GO:0072687 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2012-01-11T11:30:13Z [Term] id: FYPO:0000735 name: short meiotic spindle def: "A spindle phenotype in which the meiotic spindle is shorter than normal." [PomBase:mah] synonym: "short meiotic spindles" EXACT [PomBase:mah] is_a: FYPO:0000130 ! short spindle is_a: FYPO:0000734 ! abnormal meiotic spindle intersection_of: PATO:0000574 intersection_of: inheres_in GO:0072687 created_by: midori creation_date: 2012-01-11T11:30:48Z [Term] id: FYPO:0000736 name: long meiotic spindle def: "A spindle phenotype in which the meiotic spindle is longer than normal." [PomBase:mah] synonym: "long meiotic spindles" EXACT [PomBase:mah] is_a: FYPO:0000730 ! long spindle is_a: FYPO:0000734 ! abnormal meiotic spindle intersection_of: PATO:0000573 intersection_of: inheres_in GO:0072687 created_by: midori creation_date: 2012-01-11T11:30:48Z [Term] id: FYPO:0000737 name: abnormal meiotic spindle assembly def: "A cellular process phenotype in which assembly of the meiotic spindle is abnormal." [PomBase:mah] synonym: "abnormal spindle assembly involved in meiosis" EXACT [PomBase:mah] is_a: FYPO:0000051 ! abnormal meiosis is_a: FYPO:0000119 ! abnormal spindle assembly intersection_of: PATO:0000001 intersection_of: inheres_in GO:0090306 intersection_of: qualifier PATO:0000460 relationship: results_in_formation_of FYPO:0000734 ! abnormal meiotic spindle created_by: midori creation_date: 2012-01-11T11:42:55Z [Term] id: FYPO:0000739 name: cellular pigment accumulation phenotype def: "A cellular process phenotype that affects the occurrence of pigment accumulation in a cell." [PomBase:mah] comment: Note that this term refers to GO:0033059 'cellular pigmentation', rather than GO:0043482 'cellular pigment accumulation', because GO:0043482 has paths to 'response to stimulus' in GO. is_a: FYPO:0000114 ! cellular process phenotype intersection_of: FYPO:0000001 ! phenotype intersection_of: inheres_in GO:0033059 created_by: midori creation_date: 2012-01-11T12:21:14Z [Term] id: FYPO:0000740 name: normal cellular pigment accumulation def: "A cellular process phenotype in which the occurrence of cellular pigment accumulation is normal." [PomBase:mah] comment: Note that normal cells do not accumulate detectable levels of any pigment; also note that this term refers to GO:0033059 'cellular pigmentation', rather than GO:0043482 'cellular pigment accumulation', because GO:0043482 has paths to 'response to stimulus' in GO. is_a: FYPO:0000627 ! normal cellular process is_a: FYPO:0000739 ! cellular pigment accumulation phenotype intersection_of: PATO:0000001 intersection_of: inheres_in GO:0033059 intersection_of: qualifier PATO:0000461 created_by: midori creation_date: 2012-01-11T12:27:26Z [Term] id: FYPO:0000741 name: increased cellular pigment accumulation def: "A cellular process phenotype in which the occurrence of cellular pigment accumulation is increased." [PomBase:mah] comment: Note that normal cells do not accumulate detectable levels of any pigment; for this reason, FYPO does not include separate terms for 'increased' and 'abnormal' pigment accumulation. Also note that pigment accumulates in the vacuole. This term refers to GO:0033059 'cellular pigmentation', rather than GO:0043482 'cellular pigment accumulation', because GO:0043482 has paths to 'response to stimulus' in GO. synonym: "abnormal cellular pigment accumulation" EXACT [PomBase:mah] is_a: FYPO:0000628 ! abnormal cellular process is_a: FYPO:0000739 ! cellular pigment accumulation phenotype intersection_of: PATO:0002051 intersection_of: inheres_in GO:0033059 created_by: midori creation_date: 2012-01-11T12:29:34Z [Term] id: FYPO:0000742 name: abnormal protein localization to actin cortical patch def: "A cell phenotype in which the localization of a protein to actin cortical patches is abnormal." [PomBase:mah] synonym: "abnormal protein localisation to actin cortical patch" EXACT [PomBase:mah] is_a: FYPO:0000443 ! abnormal protein localization intersection_of: PATO:0000001 intersection_of: inheres_in GO:0044379 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2012-01-11T12:45:30Z [Term] id: FYPO:0000743 name: abnormal actin cortical patch internalization def: "A cellular process phenotype in which actin cortical patch internalization is abnormal." [PomBase:mah] synonym: "abnormal actin cortical patch internalisation" EXACT [PomBase:mah] is_a: FYPO:0000190 ! abnormal actin cortical patch localization intersection_of: PATO:0000001 intersection_of: inheres_in GO:0044397 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2012-01-11T12:50:31Z [Term] id: FYPO:0000744 name: normal protein localization to actin cortical patch def: "A cell phenotype in which the localization of a protein to actin cortical patches is normal." [PomBase:mah] is_a: FYPO:0000644 ! normal protein localization intersection_of: PATO:0000001 intersection_of: inheres_in GO:0044379 intersection_of: qualifier PATO:0000461 created_by: midori creation_date: 2012-01-11T01:47:11Z [Term] id: FYPO:0000745 name: delayed abnormal actin cortical patch internalization def: "A cellular process phenotype in which actin cortical patch internalization is delayed." [PomBase:mah] synonym: "delayed actin cortical patch internalisation" EXACT [PomBase:mah] is_a: FYPO:0000743 ! abnormal actin cortical patch internalization intersection_of: PATO:0002052 intersection_of: inheres_in GO:0044397 created_by: midori creation_date: 2012-01-11T01:57:25Z [Term] id: FYPO:0000746 name: abolished actin cortical patch internalization def: "A cellular process phenotype in which actin cortical patch internalization is abolished." [PomBase:mah] synonym: "abolished actin cortical patch internalisation" EXACT [PomBase:mah] is_a: FYPO:0000743 ! abnormal actin cortical patch internalization intersection_of: PATO:0001508 intersection_of: inheres_in GO:0044397 created_by: midori creation_date: 2012-01-11T01:57:40Z [Term] id: FYPO:0000747 name: growth auxotrophic for adenine def: "Auxotrophy in which adenine is required for cell growth." [PomBase:mah] is_a: FYPO:0000128 ! auxotrophy intersection_of: PATO:0000422 intersection_of: towards CHEBI:16708 created_by: midori creation_date: 2012-01-11T01:59:50Z [Term] id: FYPO:0000748 name: sensitive to mercury def: "A phenotype in which cells show increased sensitivity to mercury ions." [PomBase:mah] synonym: "sensitive to mercury ions" EXACT [PomBase:mah] is_a: FYPO:0000127 ! increased sensitivity to chemical intersection_of: PATO:0001551 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:25197 created_by: midori creation_date: 2012-01-11T02:03:34Z [Term] id: FYPO:0000749 name: sensitive to selenite ion def: "A phenotype in which cells show increased sensitivity to selenite ((SeO3)2-) ions." [PomBase:mah] synonym: "sensitive to selenite ions" EXACT [PomBase:mah] synonym: "sensitive to selenium" RELATED [PomBase:mah] is_a: FYPO:0000127 ! increased sensitivity to chemical intersection_of: PATO:0001551 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:18212 created_by: midori creation_date: 2012-01-11T02:09:20Z [Term] id: FYPO:0000750 name: sensitive to silver def: "A phenotype in which cells show increased sensitivity to silver ions." [PomBase:mah] synonym: "sensitive to silver ions" EXACT [PomBase:mah] is_a: FYPO:0000127 ! increased sensitivity to chemical intersection_of: PATO:0001551 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:60253 created_by: midori creation_date: 2012-01-11T02:23:17Z [Term] id: FYPO:0000751 name: sensitive to nickel def: "A phenotype in which cells show increased sensitivity to nickel ions." [PomBase:mah] synonym: "sensitive to nickel ions" EXACT [PomBase:mah] is_a: FYPO:0000127 ! increased sensitivity to chemical intersection_of: PATO:0001551 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:25516 created_by: midori creation_date: 2012-01-11T02:23:37Z [Term] id: FYPO:0000752 name: resistance to selenate def: "An increased chemical resistance phenotype in which cells grow in the presence of a higher concentration of selenate ions than normal." [PomBase:mah] synonym: "resistant to selenate" EXACT [PomBase:mah] is_a: FYPO:0000126 ! increased resistance to chemical intersection_of: PATO:0001552 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:15075 created_by: midori creation_date: 2012-01-11T02:24:43Z [Term] id: FYPO:0000753 name: normal glutathione gamma-glutamylcysteinyltransferase activity def: "A molecular function phenotype in which the observed rate of glutathione gamma-glutamylcysteinyltransferase activity is normal." [PomBase:mah] is_a: FYPO:0000660 ! normal catalytic activity intersection_of: PATO:0000001 intersection_of: inheres_in GO:0016756 intersection_of: qualifier PATO:0000461 created_by: midori creation_date: 2012-01-11T02:33:09Z [Term] id: FYPO:0000754 name: abnormal glutathione gamma-glutamylcysteinyltransferase activity def: "A molecular function phenotype in which the observed rate of glutathione gamma-glutamylcysteinyltransferase activity is abnormal." [PomBase:mah] is_a: FYPO:0000661 ! abnormal catalytic activity intersection_of: PATO:0000001 intersection_of: inheres_in GO:0016756 intersection_of: qualifier PATO:0000460 created_by: midori creation_date: 2012-01-11T02:34:18Z [Term] id: FYPO:0000755 name: decreased glutathione gamma-glutamylcysteinyltransferase activity def: "A molecular function phenotype in which the observed rate of glutathione gamma-glutamylcysteinyltransferase activity is decreased." [PomBase:mah] is_a: FYPO:0000663 ! decreased catalytic activity is_a: FYPO:0000754 ! abnormal glutathione gamma-glutamylcysteinyltransferase activity intersection_of: PATO:0002052 intersection_of: inheres_in GO:0016756 created_by: midori creation_date: 2012-01-11T02:34:31Z [Term] id: FYPO:0000756 name: sensitive to bafilomycin A1 def: "A phenotype in which cells show increased sensitivity to bafilomycin A1." [PomBase:mah] synonym: "sensitive to bafilomycin A" RELATED [PomBase:mah] is_a: FYPO:0000127 ! increased sensitivity to chemical intersection_of: PATO:0001551 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:22689 created_by: midori creation_date: 2012-01-12T11:24:11Z [Term] id: FYPO:0000757 name: sensitive to nigericin def: "A phenotype in which cells show increased sensitivity to nigericin." [PomBase:mah] is_a: FYPO:0000127 ! increased sensitivity to chemical intersection_of: PATO:0001551 intersection_of: inheres_in GO:0016049 intersection_of: towards CHEBI:7569 created_by: midori creation_date: 2012-01-12T11:25:08Z [Typedef] id: comprises_cells_with_phenotype name: comprises cells with phenotype def: "Relation between a phenotype that inheres in a population of cell and a phenotype that inheres in all of the individual cells in the population." [PomBase:mah] synonym: "includes only cells with phenotype" EXACT [PomBase:mah] is_a: includes_cells_with_phenotype ! includes cells with phenotype created_by: mah79 creation_date: 2011-04-26T02:12:03Z [Typedef] id: during name: during xref: OBO_REL:during [Typedef] id: exists_during name: exists_during xref: OBO_REL:exists_during [Typedef] id: has_part name: has_part xref: OBO_REL:has_part is_transitive: true created_by: midori creation_date: 2009-07-30T12:00:35Z [Typedef] id: includes_cells_with_phenotype name: includes cells with phenotype def: "Relation between a phenotype that inheres in a population of cell and a phenotype that inheres in some or all of the individual cells in the population." [PomBase:mah] is_a: has_part ! has_part created_by: mah79 creation_date: 2011-04-26T02:10:32Z [Typedef] id: inheres_in name: inheres_in xref: OBO_REL:inheres_in [Typedef] id: negatively_regulates name: negatively_regulates is_a: regulates ! regulates [Typedef] id: occurs_in name: occurs in xref: BFO:0000066 [Typedef] id: part_of name: part_of xref: OBO_REL:part_of is_transitive: true [Typedef] id: positively_regulates name: positively_regulates is_a: regulates ! regulates [Typedef] id: preceded_by name: preceded_by xref: OBO_REL:preceded_by [Typedef] id: qualifier name: qualifier comment: placeholder relation to indicate normality/abnormality. [Typedef] id: regulates name: regulates transitive_over: part_of ! part_of [Typedef] id: results_in_formation_of name: results_in_formation_of xref: OBO_REL:results_in_formation_of [Typedef] id: towards name: towards comment: relation binding a relational quality or disposition to the relevant type of entity xref: OBO_REL:towards