Class ID,Preferred Label,Synonyms,Definitions,Obsolete,CUI,Semantic Types,Parents,adjacent to,after,aligned with,alternative_term,backward compatible with,before,before or simultaneous with,causally downstream of,causally upstream of,characteristic of,comment,contains process,contributor,created_by,creation_date,creator,curator note,definition_source,denotes,deprecated,derives from,editor note,editor preferred term~editor preferred label,ends with,example of usage,has category label,has component,has curation status,has database cross reference,has denominator,has ID digit count,has ID policy for,has ID range allocated,has input,has measurement datum,has measurement unit label,has member,has numerator,has obsolescence reason,has output,has part,has participant,has quality,has quantity,has related synonym,has role,has specified input,has specified output,has specified value,has synonym,has value specification,has_alternative_id,has_broad_synonym,has_exact_synonym,has_narrow_synonym,hasCountryOfOrigin,http://data.bioontology.org/metadata/obo/part_of,http://data.bioontology.org/metadata/prefixIRI,http://data.bioontology.org/metadata/treeView,http://purl.obolibrary.org/obo/BFO_0000062,http://purl.obolibrary.org/obo/BFO_0000063,http://purl.obolibrary.org/obo/IAO_0000600,http://purl.obolibrary.org/obo/is_unit_of,http://purl.obolibrary.org/obo/ro/subsets#ro-eco,http://purl.obolibrary.org/obo/RO_0002259,http://purl.obolibrary.org/obo/valid_for_go_annotation_extension,http://purl.obolibrary.org/obo/valid_for_go_gp2term,http://purl.obolibrary.org/obo/valid_for_go_ontology,http://purl.obolibrary.org/obo/valid_for_gocam,http://purl.org/dc/elements/1.1/source,http://purl.org/dc/terms/contributor,http://purl.org/dc/terms/date,http://purl.org/dc/terms/description,http://purl.org/dc/terms/license,http://purl.org/dc/terms/source,http://purl.org/dc/terms/title,http://www.geneontology.org/formats/oboInOwl#default-namespace,http://www.geneontology.org/formats/oboInOwl#SubsetProperty,http://xmlns.com/foaf/0.1/mbox,immediately preceded by,immediately precedes,imported from,in_subset,incompatible with,is about,is defined by,is direct form of,is specified input of,is specified output of,is_manufactured_by,label,located_in (type level),location of,member of,mentions,metadata section,namespace,NIAID GSCID-BRC alternative term,obsolete has string specification of,obsolete: has categorical specification of,obsolete: has categorical value specification,obsolete: has primitive data type,obsolete: has string value specification,obsolete: user interface help,obsolete: user interface hidden,obsolete: user interface value specification,occurs in,output of,part of,prior version,produced by,realized in,see also,simultaneous with,specifies value of,starts with,temporal interpretation,term as in existing standard,term editor,term replaced by,term source,term tracker item,textual definition,transmitted by,user interface definition,user interface feature,user interface label,user interface regular epression normalize,user interface regular expression display format,user interface regular expression validate,versionInfo
http://purl.obolibrary.org/obo/GENEPIO_0002077,subject organism,,An investigative subject which is an organism.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A particular human patient, or a given animal or plant.",,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/OBI_0001169,,,,,,,,,,,,,,,GENEPIO:0002077,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,subject organism,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,An investigative subject which is an organism.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0040001,shrimp allergy,,A crustacean allergy that has_allergic_trigger shrimp.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0040001,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,shrimp allergy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A crustacean allergy that has_allergic_trigger shrimp.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001756,contact specification - phone,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001756,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,contact specification - phone,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"order:
NCIT:C40978 # phone
GENEPIO:0001896 # phone type",,,,,
http://purl.obolibrary.org/obo/NCIT_C17734,At-Risk Population,Population at Risk|At-Risk Population,"Population groups with an increased likelihood of a disease or other health issue, eg smoking, drug use, teen pregnancy.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Population at Risk|At-Risk Population,,,,NCIT:C17734,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,At-Risk Population,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Population groups with an increased likelihood of a disease or other health issue, eg smoking, drug use, teen pregnancy.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_38261,imidazolidines,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:38261,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,imidazolidines,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02021761,"pork roast (boneless, raw)",,A raw and boneless pork roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02021761,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"pork roast (boneless, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw and boneless pork roast.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0001930,categorical value specification,,A value specification that is specifies one category out of a fixed number of nominal categories,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,categorical value specification,,,,,http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0001930,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/STATO_0000252,,,,,,categorical value specification,,,,,,,,,,,,,,,,,,,,,,,,,,,,PERSON:Bjoern Peters,,,,A value specification that is specifies one category out of a fixed number of nominal categories,,,,categorical,,,,
http://purl.obolibrary.org/obo/FOODON_02000168,beef petite sirloin steak (raw),,A raw beef petite sirloin steak.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000168,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef petite sirloin steak (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef petite sirloin steak.,,,,,,,,
http://purl.obolibrary.org/obo/OGMS_0000073,diagnosis,,The representation of a conclusion of a diagnostic process.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OGMS:0000073,,,,,,,,,,,,,,2019-09-08T23:41:09Z,,,,,,,,,,,,,,,,,,,diagnosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://orcid.org/0000-0002-8844-9165,,,,The representation of a conclusion of a diagnostic process.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_17334,penicillin,,"Any member of the group of substituted penams containing two methyl substituents at position 2, a carboxylate substituent at position 3 and a carboxamido group at position 6.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:7961|CHEBI:25869|CHEBI:14742,,,,,,CHEBI:17334,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,penicillin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Any member of the group of substituted penams containing two methyl substituents at position 2, a carboxylate substituent at position 3 and a carboxamido group at position 6.",,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000972,take-out restaurant,take-away|take out restaurant,A restaurant which provides prepared meals or other food products that the purchaser must eat off its premises.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,take-away|take out restaurant,,,,ENVO:01000972,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,take-out restaurant,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A restaurant which provides prepared meals or other food products that the purchaser must eat off its premises.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_35571,mancude organic heterocyclic parent,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:35571,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,mancude organic heterocyclic parent,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03420164,animal material,,Material that derives from one or more animals,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=C0164,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03420164,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,animal material,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Material that derives from one or more animals,,,,,,,,
http://purl.obolibrary.org/obo/MMO_0000344,necropsy,,A postmortem examination of the body of an animal to determine the cause of death or the character and extent of changes produced by disease. [database_cross_reference: Merriam-Webster:Merriam-Websters_Online_Dictionary--11th_Ed],FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MMO:0000344,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,necropsy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A postmortem examination of the body of an animal to determine the cause of death or the character and extent of changes produced by disease. [database_cross_reference: Merriam-Webster:Merriam-Websters_Online_Dictionary--11th_Ed],,,,tissue collection (necropsy),,,,
http://purl.obolibrary.org/obo/GENEPIO_0001715,Kpnl,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001715,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Kpnl,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C20587,Age Related Group,Age-related Group|Age Related Group|Age Group,Subgroups of populations based on age.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Age-related Group|Age Related Group|Age Group,,,,NCIT:C20587,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Age Related Group,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Subgroups of populations based on age.,,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000134,true negative rate,,specificity is a measurement datum qualifying a binary classification test and is computed by substracting the false positive rate to the integral numeral 1,FALSE,,,,,,,specificity,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000134,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,true negative rate,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra|Alejandra Gonzalez-Beltran|Orlaith Burke,,,,specificity is a measurement datum qualifying a binary classification test and is computed by substracting the false positive rate to the integral numeral 1,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002111,antimicrobial resistance testing reference standard version,,The version of the antimicrobial reistance testing reference standard protocol used in assessing an isolate.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002111,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,antimicrobial resistance testing reference standard version,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,The version of the antimicrobial reistance testing reference standard protocol used in assessing an isolate.,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_379583,Feliformia,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,Feliformia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:379583,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Feliformia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_379584,Caniformia,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,Caniformia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:379584,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Caniformia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00001006,mammalian meat food product,,"A food product made of meat, the skeletal muscle and associated fat, and other edible tissues such as organs, livers, skin, brains, bone marrow, kidneys, or lungs, of mammals.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://bioregistry.io/reference/siren:F17332,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00001006,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,mammalian meat food product,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A food product made of meat, the skeletal muscle and associated fat, and other edible tissues such as organs, livers, skin, brains, bone marrow, kidneys, or lungs, of mammals.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02010001,animal substance,,Material which is produced by an animal.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02010001,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,animal substance,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Material which is produced by an animal.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000412,piece(s) of beef,,One or more pieces of beef.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000412,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece(s) of beef,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,One or more pieces of beef.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001847,comfortable health status,,,FALSE,,,,,http://purl.obolibrary.org/obo/GENEPIO_0002023,,,,http://purl.obolibrary.org/obo/GENEPIO_0001848,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001847,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,comfortable health status,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,NHS Terms: https://en.wikipedia.org/wiki/Medical_state,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0050061,erysipeloid,,"A primary bacterial infectious disease that results_in infection located_in skin, has_material_basis_in Erysipelothrix rhusiopathiae, which is transmitted_by contact with infected animals. The infection has_symptom redness of skin, has_symptom tenderness of skin and has_symptom warmth of skin.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0050061,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,erysipeloid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A primary bacterial infectious disease that results_in infection located_in skin, has_material_basis_in Erysipelothrix rhusiopathiae, which is transmitted_by contact with infected animals. The infection has_symptom redness of skin, has_symptom tenderness of skin and has_symptom warmth of skin.",,,,,,,,
http://purl.obolibrary.org/obo/OBA_2001013,age of onset of type 2 diabetes mellitus,age type 2 diabetes mellitus symptoms begin|age at onset of type 2 diabetes mellitus,The age at which type 2 diabetes mellitus manifestations first appear.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,age type 2 diabetes mellitus symptoms begin|age at onset of type 2 diabetes mellitus,,,,OBA:2001013,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age of onset of type 2 diabetes mellitus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The age at which type 2 diabetes mellitus manifestations first appear.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102071,experimental protocol url,,PCDS: Provide a url link to the protocol.,FALSE,,,,,,,PCDS:experimental_protocol_url,,,,,,,PCDS: Provide a url link to the protocol.,,,,,,,,,,,,,,PCDS: https://github.com/ww-protocol,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102071,,,,,,,,,,,,,,2026-04-13T17:16:47.336Z,,,,,,,,,,,,,,,,,,,experimental protocol url,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PCDS: A URL linking to documentation or a protocol that details the experimental methodology used in the study.,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000098,beef 7-bone chuck roast (raw),,A raw beef 7-bone chuck roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000098,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef 7-bone chuck roast (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef 7-bone chuck roast.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00004173,saku,,A Japanese term to describe a uniformly cut block of skinless and boneless seafood.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00004173,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,saku,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Japanese term to describe a uniformly cut block of skinless and boneless seafood.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100918,specimen collector project id,specimen collector project ID,A data field which describes the user-defined project name assigned to a sequencing project.,FALSE,,,,,,,PCDS:specimen_collector_project_id,,,,,,,"PCDS: If the sample was collected or analyzed under the umbrella of a specific project, include the name of that project here.",,,,,,,,,,,Drafted 2023-11-03,,,PCDS: Wastewater Surveillance Pilot 2023,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,specimen collector project ID,specimen collector project ID slot,,,,GENEPIO:0100918,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,specimen collector project id,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the user-defined project name assigned to a sequencing project.,,PCDS: The user-defined project name assigned to a sequencing project.,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490282,"glass container, coloured, covered/protected",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0282,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490282,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"glass container, coloured, covered/protected",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100778,populated area type field category,populated area type,An environmental data field which describes the type of area that is populated by humans and indicates how populated an area is.,FALSE,,,,,,,PCDS:populated_area_type_slot_group,,,,,,,PCDS: Provide the populated area type from the pick list.,,,,,,,,,,,,,,PCDS: Urban area,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,populated area type,populated area type slot,,,,GENEPIO:0100778,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2022-06-25T03:32:51.876Z,,,,,,,,,,,,,,,,,,,populated area type field category,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the type of area that is populated by humans and indicates how populated an area is.,,PCDS: A type of area that is populated by humans to different degrees.,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510093,no modified food starch added claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0093,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510093,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,no modified food starch added claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001649,food - liquid,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001649,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,food - liquid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001835,NCBI BioSample Pathogen.cl standard,,"A National Center for Biotechnology Information BioSample specification defines fields and terms that provide ""descriptions of biological source materials used in experimental assays"".",FALSE,,,,,,,,,,,,,,,,,,,,,http://www.ncbi.nlm.nih.gov/biosample/,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001835,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/OBI_0100051,,,,,,NCBI BioSample Pathogen.cl standard,,,,,,,,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/biosample/docs/packages/Pathogen.cl.1.0/,,,,,,Damion Dooley,,,,"A National Center for Biotechnology Information BioSample specification defines fields and terms that provide ""descriptions of biological source materials used in experimental assays"".",,,"order:
OBI:0001628 # investigation identifier
OBI:0001616 # specimen identifier
GENEPIO:0001808 # specimen title
GENEPIO:0000113 # specimen category
sep:00196 # specimen description
OBI:0001479 # specimen from organism
GENEPIO:0001640 # specimen organism taxonomy (species)
GENEPIO:0000027 # specimen source context
GENEPIO:0001722 # NCBI specimen voucher
GENEPIO:0001429 # strain identifier 
GENEPIO:0001798 # NCBI BioSample culture identifier
GENEPIO:0001717 # viral subtype
OMP:0000207 # serotype phenotype
SO:0001027 # genotype
GENEPIO:0001079 # serovar
GENEPIO:0001716 # subgroup
GENEPIO:0001055 # NCBI pathotype
GENEPIO:0001054 # isolate passage history
GENEPIO:0001656 # latitude and longitude coordinate
GENEPIO:0001657 # NCBI BioSample geo_loc_name model
GENEPIO:0001051 # NCBI BioSample isolate (human name or description)
GENEPIO:0001648 # NCBI Contributing organization / project
GENEPIO:0001797 # specimen collector
OBI:0001619 # specimen collection date
OBI:0001888 # sequencing facility contact person
GENEPIO:0001651 # INSDC institution code
GENEPIO:0001721 # NCBI culture collection
GENEPIO:0001567 # subject (host) taxonomic species
GENEPIO:0001724 # subject organism common name
GENEPIO:0001775 # subject age at time of specimen collection
GENEPIO:0000026 # subject health status at time of specimen extraction
GENEPIO:0000031 # subject sex
GENEPIO:0001614 # subject description
GENEPIO:0001617 # subject disease
GENEPIO:0001625 # subject disease stage
GENEPIO:0001212 # subject disease outcome",,,,,
http://purl.obolibrary.org/obo/ENVO_00000025,reservoir,covered reservoir,"An artificial body of water, often contained by a dam, constructed for the purpose of water storage.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Reservoir|TGN:51259|SWEETRealm:Reservoir|Geonames:H.RSV|FTT:882|FTT:588|FTT:587|EcoLexicon:reservoir,,,,,,,,,,,,,,,,,,,,,,,,lake,,covered reservoir,,,ENVO:00000025,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,reservoir,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An artificial body of water, often contained by a dam, constructed for the purpose of water storage.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002122,Whirlpak sampling bag,,A sterilized sampling bag that is puncture proof tabs for protection from damage due to wire-end protrusion and leak-proof closures.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Whirlpak sampling bag,,,,,,,,,,,,,,,,,,,,,,,,,,,,Emma Griffiths,,,,A sterilized sampling bag that is puncture proof tabs for protection from damage due to wire-end protrusion and leak-proof closures.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490427,stopper,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0427,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490427,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,stopper,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001884,n-dimensional entity,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001884,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,n-dimensional entity,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/IAO_0000594,software application,,A software application is software that can be directly executed by some processing unit.,FALSE,,,,,,,,,,,,,,,,,,,,,https://github.com/information-artifact-ontology/IAO/issues/80,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,IAO:0000594,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/iao.owl,,,,,,,,,software application,,,,,,,,,,,,,,,,,,,,,,,,,,,,PERSON: Michel Dumontier|PERSON: Melanie Courtot,,,,A software application is software that can be directly executed by some processing unit.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100530,AMR testing standard,antimicrobial resistance testing standard|AMR_testing_standard|AMR testing standard,An antimicrobial resistance (AMR) field which describes testing standard used for determination of resistance phenotype.,FALSE,,,,,,,PCDS:amr_testing_standard|PCDS:*_testing_standard,,,,,,,PCDS: Select a testing standard from the pick list provided.,,,,,,,,,,,,,,PCDS: Clinical Laboratory and Standards Institute (CLSI) [ARO:3004366],,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,antimicrobial resistance testing standard|AMR_testing_standard|AMR testing standard,antimicrobial resistance testing standard slot|antimicrobial resistance testing standard field|antimicrobial resistance testing standard|AMR testing standard slot,,,,GENEPIO:0100530,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-12-22T00:55:53.808Z,,,,,,,,,,,,,,,,,,,AMR testing standard,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An antimicrobial resistance (AMR) field which describes testing standard used for determination of resistance phenotype.,,PCDS: The testing standard used for determination of resistance phenotype,,,,,,
http://purl.obolibrary.org/obo/UBERON_0009854,digestive tract diverticulum,,Branch or outpocketing of the digestive tract.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FBbt:00100316,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0009854,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,digestive tract diverticulum,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Branch or outpocketing of the digestive tract.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0009856,sac,pouch,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:Diverticulum,,,,,,,,,,,,,,,,,,,,,,,,,pouch,,,,UBERON:0009856,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,sac,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0009855,echinoderm gastric caecum,,Non-contractile pouch that is connected to the anterior stomach through a slit-like opening. This pouch is also well-connected to the haemal system through numerous haemal ducts within its connective tissue layer.,FALSE,,,,,,,,,,,,,,"The digestive tract of many metazoan invertebrates is characterized by the presence of caeca or diverticula that serve secretory and/or absorptive functions. With the development of various feeding habits, distinctive digestive organs may be present in certain taxa. This also holds true for sea urchins (Echinodermata: Echinoidea), in which a highly specialized gastric caecum can be found in members of a derived subgroup, the Irregularia (cake urchins, sea biscuits, sand dollars, heart urchins, and related forms)... Homologous with the more or less pronounced dilation of the anterior stomach that is observed in most ""regular"" sea urchin taxa[PMID:20955602]",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0009855,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,echinoderm gastric caecum,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Non-contractile pouch that is connected to the anterior stomach through a slit-like opening. This pouch is also well-connected to the haemal system through numerous haemal ducts within its connective tissue layer.,,,,,,,,
http://www.ebi.ac.uk/efo/EFO_0009721,mother's age at death,,The age of a person's mother at which mother's death occurred.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,efo:EFO_0009721,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,mother's age at death,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The age of a person's mother at which mother's death occurred.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02021418,elk material,,Material that derives from some elk.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02021418,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,elk material,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Material that derives from some elk.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001829,draft IRIDA standard,,"A standard established for use by the Integrated Rapid Infectious Disease Analysis (IRIDA) project, which is a Canadian-led initiative to build an open source, end-to-end platform for infectious disease genomic epidemiology.",FALSE,,,,,,,,,,,,,,,,,,,,,http://www.irida.ca/,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001829,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,draft IRIDA standard,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"A standard established for use by the Integrated Rapid Infectious Disease Analysis (IRIDA) project, which is a Canadian-led initiative to build an open source, end-to-end platform for infectious disease genomic epidemiology.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510124,health-related claim,,"Health claim means any claim made on the label or in labeling of a food, including a dietary supplement, that expressly or by implication, including ""third party"" references, written statements (e.g., a brand name including a term such as ""heart""), symbols (e.g., a heart symbol), or vignettes, characterizes the relationship of any substance to a disease or health-related condition. See also 21 CFR 101.14  [http://www.accessdata.fda.gov/scripts/cdrh/cfdocs/cfcfr/CFRSearch.cfm?fr=101.14].

A claim is a health claim if in the naming of the substance or category of substances, there is a description or indication of a functionality or an implied effect on health; examples: ""contains antioxidants"" (the function is an antioxidant effect); ""containsprobiotics/prebiotics"" (the reference to probiotic/prebiotic implies a health benefit). Equally, claims which refer to an indication of a functionality in the description of a nutrient or a substance (for instance as an adjective to the substance) should also beclassified as a health claim; examples: ""with prebiotic fibres"" or ""contains prebiotic fibres"".

In Europe, a health claim is any statement about a relationship between food and health [http://ec.europa.eu/food/food/labellingnutrition/claims/health_claims_en.htm], and only authorized health claims are legal [see http://ec.europa.eu/food/food/labellingnutrition/claims/community_register/health_claims_en.htm].
COMMISSION REGULATION (EU) No 432/2012 of 16 May 2012 establishes a list of permitted health claims made on foods, other than those referring to the reduction of disease risk and to children""s development and health [http://eur-lex.europa.eu/LexUriServ/LexUriServ.do?uri=OJ:L:2012:136:0001:0040:en:PDF]",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0124,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510124,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,health-related claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Health claim means any claim made on the label or in labeling of a food, including a dietary supplement, that expressly or by implication, including ""third party"" references, written statements (e.g., a brand name including a term such as ""heart""), symbols (e.g., a heart symbol), or vignettes, characterizes the relationship of any substance to a disease or health-related condition. See also 21 CFR 101.14  [http://www.accessdata.fda.gov/scripts/cdrh/cfdocs/cfcfr/CFRSearch.cfm?fr=101.14].

A claim is a health claim if in the naming of the substance or category of substances, there is a description or indication of a functionality or an implied effect on health; examples: ""contains antioxidants"" (the function is an antioxidant effect); ""containsprobiotics/prebiotics"" (the reference to probiotic/prebiotic implies a health benefit). Equally, claims which refer to an indication of a functionality in the description of a nutrient or a substance (for instance as an adjective to the substance) should also beclassified as a health claim; examples: ""with prebiotic fibres"" or ""contains prebiotic fibres"".

In Europe, a health claim is any statement about a relationship between food and health [http://ec.europa.eu/food/food/labellingnutrition/claims/health_claims_en.htm], and only authorized health claims are legal [see http://ec.europa.eu/food/food/labellingnutrition/claims/community_register/health_claims_en.htm].
COMMISSION REGULATION (EU) No 432/2012 of 16 May 2012 establishes a list of permitted health claims made on foods, other than those referring to the reduction of disease risk and to children""s development and health [http://eur-lex.europa.eu/LexUriServ/LexUriServ.do?uri=OJ:L:2012:136:0001:0040:en:PDF]",,,,,,,,
http://purl.obolibrary.org/obo/DOID_9700,bacterial conjunctivitis,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:9700,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,bacterial conjunctivitis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03480039,packed in fruit juice,,"Unsweetened single strength juice, or juice prepared from concentrated fruit juice and water which are used as a packing medium for food material.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=K0039,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03480039,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,packed in fruit juice,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Unsweetened single strength juice, or juice prepared from concentrated fruit juice and water which are used as a packing medium for food material.",,,,,,,,
http://purl.obolibrary.org/obo/OBA_2020000,age of onset of disease,age disease symptoms begin|age at onset of disease,The age at which disease manifestations first appear.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,age disease symptoms begin|age at onset of disease,,,,OBA:2020000,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age of onset of disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The age at which disease manifestations first appear.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0101014,sample storage duration value,sample storage duration value,A data field which describes the numerical value of the time measurement during which a sample is in storage.,FALSE,,,,,,,PCDS:sample_storage_duration_value,,,,,,,PCDS: Provide the numerical value of time.,,,,,,,,,,,,,,PCDS: 5,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,sample storage duration value,sample storage duration value slot,,,,GENEPIO:0101014,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,sample storage duration value,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the numerical value of the time measurement during which a sample is in storage.,,PCDS: The numerical value of the time measurement during which a sample is in storage.,,,,,,
http://purl.obolibrary.org/obo/FOODON_00005383,lamb square-cut shoulder chop,,A lamb shoulder chop that is prepared in proportional quantities from both the arm and the blade bone portions of a single square-cut shoulder.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00005383,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lamb square-cut shoulder chop,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A lamb shoulder chop that is prepared in proportional quantities from both the arm and the blade bone portions of a single square-cut shoulder.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0025766,Abnormal affect,,"An anomaly in intensity, frequency, or duration of the verbal or behavioral expression of emotions, feelings, or thoughts.",FALSE,,,,,,,,,,,,,,"Affect includes a combination of emotion in terms of feelings and its expression either in the verbal or behavioral (action) level. Normal expressions are often relatively short lived and familiar to the person while pathological expressions may be intense and extended and considered out of character for the individual. Affect encompasses: 1) emotions, 2) volition, and 3) what is termed the intellect or cognitive elements expressing (communicating) emotion and volition. Affect includes an internal feeling (emotion), an internal drive (will), and a motor component expression (typically speech, but also reflected in thoughts).",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0025766,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal affect,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An anomaly in intensity, frequency, or duration of the verbal or behavioral expression of emotions, feelings, or thoughts.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490188,"plastic container, rigid or semirigid, aluminum lid",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0188,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490188,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"plastic container, rigid or semirigid, aluminum lid",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C2364,Adrenal Agent,Adrenal Drugs|Adrenal Agent,Pharmacological agents which affect the function of the adrenal glands.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Adrenal Drugs|Adrenal Agent,,,,NCIT:C2364,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Adrenal Agent,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Pharmacological agents which affect the function of the adrenal glands.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_8480045,subiliac lymph node,subiliac lymphocenter,A lymph node located inferior to the ilium.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:323407,,,,,,,,,,,,,,,,,,,,,,,,subiliac lymphocenter,,,,,UBERON:8480045,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,subiliac lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A lymph node located inferior to the ilium.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C60811,Pediatric Death,Pediatric Death|PEDIATRIC DEATH,"Death of a fetus, neonate, or patient 20 years or younger.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Pediatric Death|PEDIATRIC DEATH,,,,NCIT:C60811,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Pediatric Death,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Death of a fetus, neonate, or patient 20 years or younger.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0000057,urethra,,"The fibromuscular tubular canal through which urine is discharged from the bladder to the exterior via the external urinary meatus; in males, the urethra is joined by the ejaculatory ducts and serves as a passageway for semen during ejaculation, as well as a canal for urine during voiding; in females, the urethra is shorter and emerges above the vaginal opening.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:Urethra|XAO:0000153|Wikipedia:Urethra|VHOG:0001264|UMLS:C0041967|SCTID:302513006|NCIT:C12417|MIAA:0000121|MESH:D014521|MAT:0000121|MA:0000379|GAID:390|FMA:19667|EV:0100099|EMAPA:30901|EFO:0000931|CALOHA:TS-1132|BTO:0001426,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0000057,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,urethra,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The fibromuscular tubular canal through which urine is discharged from the bladder to the exterior via the external urinary meatus; in males, the urethra is joined by the ejaculatory ducts and serves as a passageway for semen during ejaculation, as well as a canal for urine during voiding; in females, the urethra is shorter and emerges above the vaginal opening.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0000059,large intestine,,A subdivision of the digestive tract that connects the small intestine to the cloaca or anus. Lacks or has few villi[Kardong].,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:LargeIntestine|XAO:0000131|Wikipedia:Large_intestine_(anatomy)|VHOG:0000054|UMLS:C0021851|SCTID:181254001|NCIT:C12379|MIAA:0000046|MESH:D007420|MA:0000333|GAID:306|FMA:7201|EV:0100077|EMAPA:19252|EFO:0000840|CALOHA:TS-1306|BTO:0000706|AAO:0010396,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0000059,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,large intestine,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A subdivision of the digestive tract that connects the small intestine to the cloaca or anus. Lacks or has few villi[Kardong].,,,,,,,,
http://purl.obolibrary.org/obo/ERO_0001183,ERO_0001183,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ERO:0001183,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_8839,Anas platyrhynchos,,,FALSE,,,,,,,mallard ducks|mallard duck|mallard|duck,,,,,,,,,,,,,,,,,,,Anas platyrhynchos,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:8839,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Anas platyrhynchos,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_35352,organonitrogen compound,,Any heteroorganic entity containing at least one carbon-nitrogen bond.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:35352,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,organonitrogen compound,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any heteroorganic entity containing at least one carbon-nitrogen bond.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_25367,molecule,,Any polyatomic entity that is an electrically neutral entity consisting of more than one atom.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:25367,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,molecule,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any polyatomic entity that is an electrically neutral entity consisting of more than one atom.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02010311,animal steak (raw),,A raw animal steak.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02010311,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,animal steak (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw animal steak.,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0100096,COVID-19,severe acute respiratory syndrome coronavirus 2 infectious disease|coronavirus disease 2019|2019-nCoV infection|2019 novel coronavirus infection,A disease caused by infection with severe acute respiratory syndrome coronavirus 2.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,icd11.foundation:1730556128|UMLS:C5203670|SCTID:840539006|MESH:D000086382|MESH:C000657245|MEDGEN:1699653|ICD10CM:U07.1|DOID:0080600,,,,,,,,,,,,,,,,,,,,,,,,,severe acute respiratory syndrome coronavirus 2 infectious disease|coronavirus disease 2019|2019-nCoV infection|2019 novel coronavirus infection,,,,MONDO:0100096,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,COVID-19,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A disease caused by infection with severe acute respiratory syndrome coronavirus 2.,,,,,,,,
http://purl.obolibrary.org/obo/MP_0000001,mammalian phenotype,,"the observable morphological, physiological, behavioral and other characteristics of mammalian organisms that are manifested through development and lifespan",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MP:0000001,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mp.owl,,,,,,,,,mammalian phenotype,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"the observable morphological, physiological, behavioral and other characteristics of mammalian organisms that are manifested through development and lifespan",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470148,ultra pasteurization (UP) by heat,,"When used to describe a dairy product, means that such product shall have been thermally processed at or above 138° C (280° C) for at least 2 seconds, either before or after packaging so as to produce a product that has extended shelf life under refrigerated conditions (21 CFR 131.3 (c)). Used to describe liquid egg products that also have been thermally processed, but at a different temperature than for milk products.  The egg product will have an extended shelf life under refrigerated conditions.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0148,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470148,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,ultra pasteurization (UP) by heat,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"When used to describe a dairy product, means that such product shall have been thermally processed at or above 138° C (280° C) for at least 2 seconds, either before or after packaging so as to produce a product that has extended shelf life under refrigerated conditions (21 CFR 131.3 (c)). Used to describe liquid egg products that also have been thermally processed, but at a different temperature than for milk products.  The egg product will have an extended shelf life under refrigerated conditions.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000252,lamb shoulder arm chop (raw),,A raw lamb shoulder arm chop.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000252,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lamb shoulder arm chop (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw lamb shoulder arm chop.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C92720,Pregnancy Finding,Pregnancy Finding,"Symptoms, signs, diagnostic examinations or a test results in a pregnant mother.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Pregnancy Finding,,,,NCIT:C92720,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Pregnancy Finding,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Symptoms, signs, diagnostic examinations or a test results in a pregnant mother.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102154,Ion Torrent Genexus,,"An Ion Torrent sequencing instrument model which utilises Ion semiconductor sequencing technology, automates the sequencing workflow, and is designed to run with GX5 chips and two Genexus couplers",FALSE,,,,,,,,,,,,,,,,,,,,,https://www.thermofisher.com/uk/en/home/life-science/sequencing/next-generation-sequencing/instruments/genexus-system.html,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102154,,,,,,,,,,,,,https://orcid.org/0000-0002-7654-6902|https://orcid.org/0000-0001-8008-8249,2025-03-21T01:14:47.111Z,,,,,,,,,,,,,,,,,,,Ion Torrent Genexus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An Ion Torrent sequencing instrument model which utilises Ion semiconductor sequencing technology, automates the sequencing workflow, and is designed to run with GX5 chips and two Genexus couplers",,,,,,,,
http://purl.obolibrary.org/obo/HP_0001574,Abnormality of the integument,,"An abnormality of the integument, which consists of the skin and the superficial fascia.",FALSE,,,,,,,,,,,,,,"Abnormality of skin, hair, or nails.",,,,,,,,,,,,,,,,,,UMLS:C4025761,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0001574,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormality of the integument,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An abnormality of the integument, which consists of the skin and the superficial fascia.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100690,available data types,available_data_types|available data types,A data field which describes the type of data that is available.,FALSE,,,,,,,PCDS:available_data_types,,,,,,,PCDS: This field provides information about additional data types that are available that may provide context for interpretation of the sequence data. Provide a term from the picklist for additional data types that are available. Additional data types may require special permission to access. Contact the data provider for more information.,,,,,,,,,,,The data may or may not require permission to access.,,,PCDS: Total coliform count [GENEPIO:0100729],,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,available_data_types|available data types,available data types slot,,,,GENEPIO:0100690,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-06-25T03:32:51.876Z,,,,,,,,,,,,,,,,,,,available data types,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the type of data that is available.,,"PCDS: The type of data that is available, that may or may not require permission to access.",,,,,,
http://purl.obolibrary.org/obo/DOID_12096,sodoku disease,,"A primary bacterial infectious disease that results_in infection, has_material_basis_in Spirillum minus, which is transmitted_by contact with urine or secretions from the mouth, eye, or nose of an infected animal or transmitted_by bite of an infected animal, especially rat. The infection has_symptom chills, has_symptom relapsing fever, has_symptom rash and has_symptom joint pain.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:12096,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,sodoku disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A primary bacterial infectious disease that results_in infection, has_material_basis_in Spirillum minus, which is transmitted_by contact with urine or secretions from the mouth, eye, or nose of an infected animal or transmitted_by bite of an infected animal, especially rat. The infection has_symptom chills, has_symptom relapsing fever, has_symptom rash and has_symptom joint pain.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530146,butchery cut of animal,,A piece of animal meat which has been cut according to butchery practice.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0146,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530146,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,butchery cut of animal,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A piece of animal meat which has been cut according to butchery practice.,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0003346,central nervous system vasculitis,vasculitis of central nervous system|central nervous system vasculitis,Vasculitis affecting the blood vessels of the brain and/or spinal cord.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0751878|NCIT:C84622|MESH:D020293|MEDGEN:148408|GARD:0023462|DOID:525,,,,,,,,,,,,,,,,,,,,,,,,,vasculitis of central nervous system|central nervous system vasculitis,,,,MONDO:0003346,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#rare|http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar|http://purl.oboInOwllibrary.org/oboInOwl/mondo#gard_rare,,,,,,,,central nervous system vasculitis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Vasculitis affecting the blood vessels of the brain and/or spinal cord.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000013,other capture type,,A data item that is a free text description provided to indicate a target capture specification not covered by the other types.,FALSE,,,,,,,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/books/NBK54364/,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000013,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,other capture type,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A data item that is a free text description provided to indicate a target capture specification not covered by the other types.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100522,AMR measurement,antimicrobial resistance measurement|AMR_measurement|AMR measurement,A data field which describes the measured value of antimicrobial resistance (AMR).,FALSE,,,,,,,PCDS:amr_measurement|PCDS:*_measurement,,,,,,,PCDS: This field should only contain a number (either an integer or a number with decimals).,,,,,,,,,,,Dependent on the value specified in the 'antimicrobial agent name field' [GENEPIO:0100521],,,PCDS: 4,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,antimicrobial resistance measurement|AMR_measurement|AMR measurement,antimicrobial resistance measurement slot|antimicrobial resistance measurement field|AMR measurement slot,,,,GENEPIO:0100522,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-12-22T00:55:53.808Z,,,,,,,,,,,,,,,,,,,AMR measurement,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the measured value of antimicrobial resistance (AMR).,,PCDS: The measured value of antimicrobial resistance.,,,,,,
http://purl.obolibrary.org/obo/CHEBI_22495,aminobenzoic acid,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:22495,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,aminobenzoic acid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://edamontology.org/data_1093,sequence accession,,"A persistent, unique identifier of a molecular sequence database entry.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,data_1093,,,,,,,,,,,,,,,,,,,,,,,,EDAM,,,,,,,,,sequence accession,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"A persistent, unique identifier of a molecular sequence database entry.",,,,,,,,
http://purl.obolibrary.org/obo/UO_0000186,dimensionless unit,,A unit which is a standard measure of physical quantity consisting of only a numerical number without any units.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:0000186,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,dimensionless unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A unit which is a standard measure of physical quantity consisting of only a numerical number without any units.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000185,degree,,A plane angle unit which is equal to 1/360 of a full rotation or 1.7453310^[-2] rad.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:0000185,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,degree,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A plane angle unit which is equal to 1/360 of a full rotation or 1.7453310^[-2] rad.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000182,density unit,,A unit which is a standard measure of the influence exerted by some mass.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:0000182,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,density unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A unit which is a standard measure of the influence exerted by some mass.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000189,count unit,count,A dimensionless unit which denotes a simple count of things.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,count,,,,UO:0000189,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,count unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A dimensionless unit which denotes a simple count of things.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000187,percent,%,A dimensionless ratio unit which denotes numbers as fractions of 100.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,%,,,,UO:0000187,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,percent,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A dimensionless ratio unit which denotes numbers as fractions of 100.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_14115,toxic shock syndrome,,"A commensal bacterial infectious disease that results_in infection, has_material_basis_in Streptococcus pyogenes or has_material_basis_in Staphylococcus aureus, which produce toxins that are absorbed systemically and produce the systemic manifestations. The infection has_symptom fever, has_symptom rash, has_symptom hypotension, has_symptom multiorgan failure, has_symptom desquamation, has_symptom vomiting, has_symptom diarrhea, has_symptom headache, and has_symptom nonfocal neurologic abnormalities.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:14115,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,toxic shock syndrome,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A commensal bacterial infectious disease that results_in infection, has_material_basis_in Streptococcus pyogenes or has_material_basis_in Staphylococcus aureus, which produce toxins that are absorbed systemically and produce the systemic manifestations. The infection has_symptom fever, has_symptom rash, has_symptom hypotension, has_symptom multiorgan failure, has_symptom desquamation, has_symptom vomiting, has_symptom diarrhea, has_symptom headache, and has_symptom nonfocal neurologic abnormalities.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000126,"beef strip roast (boneless, raw)",,A raw beef strip roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000126,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"beef strip roast (boneless, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef strip roast.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00002648,food scalding,,A method of precooking food where a liquid is heated to just below the boiling point. Often used to retard the spoiling of milk.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00002648,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food scalding,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A method of precooking food where a liquid is heated to just below the boiling point. Often used to retard the spoiling of milk.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_11729,Lyme disease,,"A primary bacterial infectious disease that results_in infection, has_material_basis_in Borrelia burgdorferi, which is transmitted_by blacklegged tick (Ixodes scapularis) or transmitted_by western blacklegged tick (Ixodes pacificus). The infection has_symptom fever, has_symptom headache, has_symptom fatigue, and has_symptom skin rash called erythema migrans. If left untreated, infection can spread to joints, the heart, and the nervous system.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:11729,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,Lyme disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A primary bacterial infectious disease that results_in infection, has_material_basis_in Borrelia burgdorferi, which is transmitted_by blacklegged tick (Ixodes scapularis) or transmitted_by western blacklegged tick (Ixodes pacificus). The infection has_symptom fever, has_symptom headache, has_symptom fatigue, and has_symptom skin rash called erythema migrans. If left untreated, infection can spread to joints, the heart, and the nervous system.",,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0002076,pneumothorax,pneumothorax (disease)|pneumothorax,Abnormal presence of air in the pleural cavity.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,icd11.foundation:1946559257|UMLS:C0032326|SCTID:36118008|NCIT:C38006|MESH:D011030|MEDGEN:19365|ICD9:512.8|ICD10WHO:J93|HP:0002107|DOID:1673,,,,,,,,,,,,,,,,,,,,,,,,,pneumothorax (disease)|pneumothorax,,,,MONDO:0002076,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,pneumothorax,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Abnormal presence of air in the pleural cavity.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100557,quality control method name,quality control method name,A data field which describes the name of the method used to assess whether a sequence passed a predetermined quality control threshold.,FALSE,,,,,,,PCDS:quality_control_method_name,,,,,,,PCDS: Providing the name of the method used for quality control is very important for interpreting the rest of the QC information. Method names can be provided as the name of a pipeline or a link to a GitHub repository. Multiple methods should be listed and separated by a semi-colon. Do not include QC tags in other fields if no method name is provided.,,,,,,,,,,,,,,PCDS: measeq,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,quality control method name,quality control method name slot|quality control method name field|qc method name slot|qc method name field,,,,GENEPIO:0100557,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-1107-9135,2023-01-23T00:42:19.315Z,,,,,,,,,,,,,,,,,,,quality control method name,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the name of the method used to assess whether a sequence passed a predetermined quality control threshold.,,PCDS: The name of the method used to assess whether a sequence passed a predetermined quality control threshold.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001679,contact specification - address,,The address component of a contact specification.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001679,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,contact specification - address,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The address component of a contact specification.,,,"order:
NCIT:C25464 # Country
ENVO:00000005 # major administrative subdivision aka state/province/territory/region (via GenEpiO -> GAZ )
NCIT:C80234  # Municipality (via GenEpiO -> GAZ cities)
NCIT:C25690 # Street Address
NCIT:C25621 # postal code",,,,,
http://purl.obolibrary.org/obo/CHEBI_26079,phosphoric acid derivative,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:26079,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,phosphoric acid derivative,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001018,obsolete: delicatessen,,A delicatessen or deli is a retail establishment that sells a selection of unusual or foreign prepared foods.,TRUE,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Delicatessen,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001018,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: delicatessen,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,http://purl.obolibrary.org/obo/ENVO_01000970,,,A delicatessen or deli is a retail establishment that sells a selection of unusual or foreign prepared foods.,,,,,,,,
http://purl.obolibrary.org/obo/HP_4000072,Abnormal language feature,,The presence of any atypical form of expressive language.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:4000072,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal language feature,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The presence of any atypical form of expressive language.,,,,,,,,
http://purl.obolibrary.org/obo/PATO_0000122,length,,A 1-D extent quality which is equal to the distance between two points.,FALSE,,,,,,,,,,,,,,"Length often refers to the longer or longest dimension of an object, however, this is not always true. See https://github.com/pato-ontology/pato/issues/337 for full discussion.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PATO:0000122,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/pato.owl,http://purl.oboInOwllibrary.org/oboInOwl/pato#scalar_slim|http://purl.oboInOwllibrary.org/oboInOwl/pato#mpath_slim|http://purl.oboInOwllibrary.org/oboInOwl/pato#attribute_slim,,,,,,,,length,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A 1-D extent quality which is equal to the distance between two points.,,,,,,,,
http://purl.obolibrary.org/obo/PATO_0000125,mass,,A physical quality that inheres in a bearer by virtue of the proportion of the bearer's amount of matter.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PATO:0000125,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/cob.owl,,,,,,,,,mass,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A physical quality that inheres in a bearer by virtue of the proportion of the bearer's amount of matter.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100973,MGI DNBSEQ-E25,,"A MGI DNBSEQ instrument model that functions as a portable, standalone DNA sequencer, integrating microfluidic chips and CMOS detection modules to enable high-throughput sequencing using DNA nanoball technology; designed for versatile use both inside the lab and in field-based genomic studies.",FALSE,,,,,,,DNBSEQ-E25,,,,,,,,,,,,,,https://mgi-tech.eu/sequencing-products/dnbseq-e25,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100973,,,,,,,,,,,,,https://orcid.org/0000-0002-7654-6902|https://orcid.org/0000-0001-8008-8249,2025-03-21T01:14:47.111Z,,,,,,,,,,,,,,,,,,,MGI DNBSEQ-E25,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A MGI DNBSEQ instrument model that functions as a portable, standalone DNA sequencer, integrating microfluidic chips and CMOS detection modules to enable high-throughput sequencing using DNA nanoball technology; designed for versatile use both inside the lab and in field-based genomic studies.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C91107,Young Adult,Young Adult,An age group comprised of individuals who have reached sexual maturity but whose character and personality are still developing. In psychology this generally covers the age range of 20-40.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Young Adult,,,,NCIT:C91107,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Young Adult,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An age group comprised of individuals who have reached sexual maturity but whose character and personality are still developing. In psychology this generally covers the age range of 20-40.,,,,,,,,
http://purl.obolibrary.org/obo/OMIT_0017096,Critical Illness,grave,Vital signs are unstable and not within normal limits. Patient may be unconscious. Indicators are unfavorable.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,grave,,,,,OMIT:0017096,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/omit.owl,,,,,,,,,Critical Illness,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,Vital signs are unstable and not within normal limits. Patient may be unconscious. Indicators are unfavorable.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0004363,Abnormal circulating calcium concentration,Abnormal circulating Ca2+ concentration|Abnormal circulating Ca concentration|Abnormal blood calcium levels|Abnormal blood calcium concentration,Any deviation from the normal concentration of calcium in the blood circulation.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0040077,,Abnormal circulating Ca2+ concentration|Abnormal circulating Ca concentration|Abnormal blood calcium levels|Abnormal blood calcium concentration,,,,HP:0004363,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal circulating calcium concentration,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any deviation from the normal concentration of calcium in the blood circulation.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100559,quality control determination,quality control determination,A data field which describes the determination of a quality control assessment.,FALSE,,,,,,,PCDS:quality_control_determination,,,,,,,"PCDS: Select a value from the pick list provided. If a desired value is missing, submit a new term request to the PHA4GE QC Tag GitHub issuetracker using the New Term Request form.",,,,,,,,,,,,,,PCDS: sequence failed quality control,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,quality control determination,quality control determination slot|quality control determination field|qc determination slot|qc determination field,,,,GENEPIO:0100559,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-1107-9135,2023-01-23T00:42:19.315Z,,,,,,,,,,,,,,,,,,,quality control determination,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the determination of a quality control assessment.,,PCDS: The determination of a quality control assessment.,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490246,metal screw cap/pilfer proof,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0246,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490246,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,metal screw cap/pilfer proof,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100230,travelled on a cruise ship exposure process,,A process occuring within or in the vicinity of a cruise ship that exposes the recipient organism to a material entity.,FALSE,,,,,,,Travelled on a Cruise Ship,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100230,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,travelled on a cruise ship exposure process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A process occuring within or in the vicinity of a cruise ship that exposes the recipient organism to a material entity.,,,,,,,,
http://purl.obolibrary.org/obo/OBA_2001030,age of onset of myopia,age myopia symptoms begin|age at onset of myopia,The age at which myopia manifestations first appear.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,age myopia symptoms begin|age at onset of myopia,,,,OBA:2001030,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age of onset of myopia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The age at which myopia manifestations first appear.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000207,beef ribeye roast,,A beef rib roast that has had the sixth through the twelfth rib bones removed leaving just the rib-eye muscle.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000207,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef ribeye roast,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A beef rib roast that has had the sixth through the twelfth rib bones removed leaving just the rib-eye muscle.,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0012727,Kawasaki disease,mucocutaneous lymph node syndrome|infantile polyarteritis nodosa|acute febrile mucocutaneous lymph node syndrome [MCLS]|acute febrile mucocutaneous lymph node syndrome|Kawasaki syndrome,"A rare inflammatory disease characterized by an acute febrile, systemic, self-limiting, medium-vessel vasculitis primarily affecting children. It often causes acute coronary arteritis which is associated with coronary arterial aneurysms (CAA) that may be life threatening when untreated.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,icd11.foundation:540285662|UMLS:C0026691|SCTID:75053002|Orphanet:2331|OMIM:611775|NCIT:C34825|MedDRA:10023320|MESH:D009080|MEDGEN:10118|ICD9:446.1|ICD10CM:M30.3|GARD:0006816|EFO:0004246|DOID:13378,,,,,,,,,,,,,,,,,,,,,,,,,mucocutaneous lymph node syndrome|infantile polyarteritis nodosa|acute febrile mucocutaneous lymph node syndrome [MCLS]|acute febrile mucocutaneous lymph node syndrome|Kawasaki syndrome,,,,MONDO:0012727,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#rare|http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar|http://purl.oboInOwllibrary.org/oboInOwl/mondo#orphanet_rare|http://purl.oboInOwllibrary.org/oboInOwl/mondo#ordo_disorder|http://purl.oboInOwllibrary.org/oboInOwl/mondo#nord_rare|http://purl.oboInOwllibrary.org/oboInOwl/mondo#gard_rare|http://purl.oboInOwllibrary.org/oboInOwl/mondo#doid_rare,,,,,,,,Kawasaki disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A rare inflammatory disease characterized by an acute febrile, systemic, self-limiting, medium-vessel vasculitis primarily affecting children. It often causes acute coronary arteritis which is associated with coronary arterial aneurysms (CAA) that may be life threatening when untreated.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002067,obsolete: National Committee on Clinical Laboratory Standards (NCCLS),,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCCLS,,,,,,GENEPIO:0002067,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: National Committee on Clinical Laboratory Standards (NCCLS),,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,http://purl.obolibrary.org/obo/ARO_3004366,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_33697,ribonucleic acid,,"High molecular weight, linear polymers, composed of nucleotides containing ribose and linked by phosphodiester bonds; RNA is central to the synthesis of proteins.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:33697,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,ribonucleic acid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"High molecular weight, linear polymers, composed of nucleotides containing ribose and linked by phosphodiester bonds; RNA is central to the synthesis of proteins.",,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0005550,infectious disease,clinical infection,"A disorder directly resulting from the presence and activity of a microbial, viral, or parasitic agent in humans. It can be transmitted by direct or indirect contact.",FALSE,,,,,,,,,,,,,,"Replaces 'infection' in disease hierarchy. OBI imported term infection is moved to pathologic process. This class is a container class for infectious diseases, not the process of infection itself.",,,,,,,,,,,,,,,,,,UMLS:C0009450|SCTID:40733004|NCIT:C26726|MESH:D003141|MEDGEN:1057|IDO:0000436|ICD9:136.9|ICD9:136.8|ICD9:079.0|ICD10CM:A00-B99|EFO:0005741|DOID:0050117,,,,,,,,,,,,,,,,,,,,,,,,,transmissible disease|infectious disorder|infectious diseases and manifestations|infectious disease|infectious|infection|communicable disease,clinical infection,,,MONDO:0005550,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#rare_grouping|http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar|http://purl.oboInOwllibrary.org/oboInOwl/mondo#harrisons_view,,,,,,,,infectious disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A disorder directly resulting from the presence and activity of a microbial, viral, or parasitic agent in humans. It can be transmitted by direct or indirect contact.",,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000416,precision,,"precision or positive predictive value is defined as the proportion of the true positives against all the positive results (both true positives and false positives)

A proportion in which the numerator represents the correctly detected items within the denominator that represents all items detected.",FALSE,,,,,,,positive predictive value,,,,,,,,,,,,,,"adapted from wikipedia:
https://en.wikipedia.org/wiki/Accuracy_and_precision#In_binary_classification

last accessed: May 2016",,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000416,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,precision,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra,,,,"precision or positive predictive value is defined as the proportion of the true positives against all the positive results (both true positives and false positives)

A proportion in which the numerator represents the correctly detected items within the denominator that represents all items detected.",,,,,,,,
http://www.ebi.ac.uk/efo/EFO_0000412,distant metastasis free survival,time to development of distant metastases|event distant metastases,"Is a temporal measure from a defined start point e.g. diagnosis, or treatment of the period to appearance of a distant metastasis. A distant metastasis refers to cancer that has spread from the original (primary) tumor to distant organs or distant lymph nodes. Also known as distant cancer.",FALSE,,,,,,,,,,,,,,,,,,,,,http://www.cancer.gov/dictionary?cdrid=415317,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,time to development of distant metastases|event distant metastases,,,,efo:EFO_0000412,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,distant metastasis free survival,,,,,,,,,,,,,,,,,,,,,,,,,,,,Helen Parkinson,,,,"Is a temporal measure from a defined start point e.g. diagnosis, or treatment of the period to appearance of a distant metastasis. A distant metastasis refers to cancer that has spread from the original (primary) tumor to distant organs or distant lymph nodes. Also known as distant cancer.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_0060345,bacillary angiomatosis,,"A bartonellosis that has_material_basis_in Bartonella henselae or has_material_basis_in Bartonella quintana. The disease is characterized by the proliferation of blood vessels, resulting in them forming tumour-like masses in the skin and other organs.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0060345,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,bacillary angiomatosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A bartonellosis that has_material_basis_in Bartonella henselae or has_material_basis_in Bartonella quintana. The disease is characterized by the proliferation of blood vessels, resulting in them forming tumour-like masses in the skin and other organs.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000032,specimen collection site land use,,Human use of land involving the management and modification of natural environment or wilderness into built environment.,FALSE,,,,,,,,,,,,,,,,,,,,,URI: http://en.wikipedia.org/wiki/Land_use,,,,,,,"descriptive; type of human use (park, farm, urban)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000032,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,,,,,,,specimen collection site land use,,,,,Environmental Isolate,,,,,,,,,,,,,,,,,,,,,,Land use where sample was taken,,,Environment Canada Metadata,,Human use of land involving the management and modification of natural environment or wilderness into built environment.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100459,irida isolate id,IRIDA_isolate_ID|IRIDA isolate identifier|IRIDA isolate ID,A data field which describes the identifier of the isolate in the Integrated Rapid Infectious Disease Analysis (IRIDA) platform.,FALSE,,,,,,,PCDS:irida_isolate_id,,,,,,,"PCDS: Provide the 'sample ID' used to track information linked to the isolate in IRIDA. IRIDA sample IDs should be unqiue to avoid ID clash. This is very important in large Projects, especially when samples are shared from different organizations. Download the IRIDA sample ID and add it to the sample data in your spreadsheet as part of good data management practices.",,,,,,,,,,,,,,PCDS: GRDI_LL_12345,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,IRIDA_isolate_ID|IRIDA isolate identifier|IRIDA isolate ID,Integrated Rapid Infectious Disease Analysis isolate identifier slot|Integrated Rapid Infectious Disease Analysis isolate identifier field|Integrated Rapid Infectious Disease Analysis isolate ID slot|Integrated Rapid Infectious Disease Analysis isolate ID field|IRIDA isolate identifier slot|IRIDA isolate identifier field|IRIDA isolate ID slot,,,,GENEPIO:0100459,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,irida isolate id,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the identifier of the isolate in the Integrated Rapid Infectious Disease Analysis (IRIDA) platform.,,PCDS: The identifier of the isolate in the IRIDA platform.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001966,genomic source,,Genomic DNA (includes PCR products from genomic DNA).,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI SRA: GENOMIC,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001966,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,genomic source,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,Genomic DNA (includes PCR products from genomic DNA).,,,,,,,,
http://purl.obolibrary.org/obo/GO_0022414,reproductive process,,A biological process that directly contributes to the process of producing new individuals by one or two organisms. The new individuals inherit some proportion of their genetic material from the parent or parents.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Reproduction,,,,,,,,,,,,,,,,,,,,,,,GO:0050876|GO:0044702|GO:0019952,,,,,,GO:0022414,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl|http://purl.obolibrary.org/obo/go.owl,http://purl.oboInOwllibrary.org/oboInOwl/go#goslim_plant_ribbon|http://purl.oboInOwllibrary.org/oboInOwl/go#goslim_plant|http://purl.oboInOwllibrary.org/oboInOwl/go#goslim_pir|http://purl.oboInOwllibrary.org/oboInOwl/go#goslim_generic|http://purl.oboInOwllibrary.org/oboInOwl/go#goslim_flybase_ribbon|http://purl.oboInOwllibrary.org/oboInOwl/go#goslim_chembl|http://purl.oboInOwllibrary.org/oboInOwl/go#goslim_agr|http://purl.oboInOwllibrary.org/oboInOwl/go#gocheck_do_not_annotate,,,,,,,,reproductive process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A biological process that directly contributes to the process of producing new individuals by one or two organisms. The new individuals inherit some proportion of their genetic material from the parent or parents.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0032148,Episodic pain,,"Intermittent pain, i.e., pain that occurs occasionally and at irregular intervals.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0032148,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Episodic pain,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Intermittent pain, i.e., pain that occurs occasionally and at irregular intervals.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002135,EBI ENA Webin environmental feature,,"Identifies sequences derived by direct molecular isolation from a bulk environmental DNA sample (by PCR with or without subsequent cloning of the product, DGGE, or other anonymous methods) with no reliable identification of the source organism. Environmental samples include clinical samples, gut contents, and other sequences from anonymous organisms that may be associated with a particular host. They do not include endosymbionts that can be reliably recovered from a particular host, organisms from a readily identifiable but uncultured field sample (e.g., many cyanobacteria), or phytoplasmas that can be reliably recovered from diseased plants (even though these cannot be grown in axenic culture).",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENA Webin:environmental_feature,,,,,,GENEPIO:0002135,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,EBI ENA Webin environmental feature,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Identifies sequences derived by direct molecular isolation from a bulk environmental DNA sample (by PCR with or without subsequent cloning of the product, DGGE, or other anonymous methods) with no reliable identification of the source organism. Environmental samples include clinical samples, gut contents, and other sequences from anonymous organisms that may be associated with a particular host. They do not include endosymbionts that can be reliably recovered from a particular host, organisms from a readily identifiable but uncultured field sample (e.g., many cyanobacteria), or phytoplasmas that can be reliably recovered from diseased plants (even though these cannot be grown in axenic culture).",,,help:used only with the source feature key; source feature keys containing the /environmental_sample qualifier should also contain the /isolation_source qualifier. entries including /environmental_sample must not include the /strain qualifier,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_32524,Amniota,,,FALSE,,,,,,,amniotes,,,,,,,,,,,,,,,,,,,Amniota,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:32524,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Amniota,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_25741,oxide,,An oxide is a chemical compound of oxygen with other chemical elements.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:25741,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,oxide,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An oxide is a chemical compound of oxygen with other chemical elements.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_25754,oxo carboxylic acid,,Any compound that has an aldehydic or ketonic group as well as a carboxylic acid group in the same molecule.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:25754,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,oxo carboxylic acid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any compound that has an aldehydic or ketonic group as well as a carboxylic acid group in the same molecule.,,,,,,,,
http://purl.obolibrary.org/obo/CL_0000000,cell,,A material entity of anatomical origin (part of or deriving from an organism) that has as its parts a maximally connected cell compartment surrounded by a plasma membrane.,FALSE,,,,,,,,,,,,,,"The definition of cell is intended to represent all cells, and thus a cell is defined as a material entity and not an anatomical structure, which implies that it is part of an organism (or the entirety of one).",,,,,,,,,,,,cell,,,,,,XAO:0003012|WBbt:0004017|VHOG:0001533|KUPO:0000002|GO:0005623|FMA:68646|CALOHA:TS-2035,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CL:0000000,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/cob.owl|http://purl.obolibrary.org/obo/clo.owl,http://purl.oboInOwlInOwllibrary.org/oboInOwlInOwl/ubprop#_upper_level,,,,,,,,cell type|cell,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A material entity of anatomical origin (part of or deriving from an organism) that has as its parts a maximally connected cell compartment surrounded by a plasma membrane.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001842,serious health status,,Serious - Vital signs may be unstable and not within normal limits. Patient is acutely ill. Indicators are questionable.,FALSE,,,,,http://purl.obolibrary.org/obo/GENEPIO_0001846,,,,http://purl.obolibrary.org/obo/GENEPIO_0001669,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000120,http://purl.obolibrary.org/obo/GENEPIO_0001837,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001842,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,serious health status,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,Serious - Vital signs may be unstable and not within normal limits. Patient is acutely ill. Indicators are questionable.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001063,airline travel,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001063,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,airline travel,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002068,obsolete: Société Française de Microbiologie (SFM),,"The French Society of Microbiology (SFM) is a non-profit association which aims to bring together microbiologists from French-speaking countries, working in the domains of bacteria, viruses, Fungi and parasites, and related medical, industrial and environmental microbiology, physiology, genetics, taxonomy, hygiene, and antimicrobial agents.|La SFM a vocation à rassembler les microbiologistes de France et des pays francophones, travaillant dans les différents domaines de la microbiologie médicale, industrielle, et environnementale, en physiologie, génétique, taxonomie, hygiène, agents antimicrobiens, ...concernant les bactéries, virus, champignons et parasites.",TRUE,,,,,,,,,,,,,,,,,,,,,http://www.sfm-microbiologie.org/,,true,,This isn't at moment considered a valid EBI antibiogram choice?,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SFM,,,,,,GENEPIO:0002068,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: Société Française de Microbiologie (SFM),,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,http://purl.obolibrary.org/obo/ARO_3004369,,,"The French Society of Microbiology (SFM) is a non-profit association which aims to bring together microbiologists from French-speaking countries, working in the domains of bacteria, viruses, Fungi and parasites, and related medical, industrial and environmental microbiology, physiology, genetics, taxonomy, hygiene, and antimicrobial agents.|La SFM a vocation à rassembler les microbiologistes de France et des pays francophones, travaillant dans les différents domaines de la microbiologie médicale, industrielle, et environnementale, en physiologie, génétique, taxonomie, hygiène, agents antimicrobiens, ...concernant les bactéries, virus, champignons et parasites.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001443,exposure group ill count,,The count of ill individuals or animals on a certain date/time from a group that was likely exposed to a pathogen,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001443,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,exposure group ill count,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,The count of ill individuals or animals on a certain date/time from a group that was likely exposed to a pathogen,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001025,treatment start date,,A treatment start date is a date/time datum which indicates the start of a particular medical treatment for a patient.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001025,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,treatment start date,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A treatment start date is a date/time datum which indicates the start of a particular medical treatment for a patient.,,,,,,,,
http://purl.obolibrary.org/obo/CLO_0000019,immortal cell line cell,,"A cell line cell that is expected to be capable of an unlimited number of divisions, and is thus able to support indefinite propagation in vitro as part of an immortal cell line.",FALSE,,,,,,,permanent cell line cell|continuous cell line cell,,,,,,,,,,,,,,,,,,,immortal cell line cell,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CLO:0000019,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/clo.owl,,,,,,,,,immortal cell line cell,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Yongqun He, Matthew Brush, Allen Xiang, Asiyah Yu Lin,  Sirarat Sarntivijai, James Malone, Jie Zheng, Tomasz Adamusiak",,,,"A cell line cell that is expected to be capable of an unlimited number of divisions, and is thus able to support indefinite propagation in vitro as part of an immortal cell line.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100196,correctional facility exposure process,,A process occuring within or in the vicinity of a correctional facility that exposes the recipient organism to a material entity.,FALSE,,,,,,,Correctional Facility,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100196,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,correctional facility exposure process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A process occuring within or in the vicinity of a correctional facility that exposes the recipient organism to a material entity.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000038,beef sirloin tip center steak (raw),,A raw beef sirloin tip center steak.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000038,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef sirloin tip center steak (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef sirloin tip center steak.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100032,bronchoalveolar lavage,BAL,The collection of bronchoalveolar lavage fluid (BAL) from the lungs.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,BAL,,,,GENEPIO:0100032,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,bronchoalveolar lavage,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The collection of bronchoalveolar lavage fluid (BAL) from the lungs.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000021,beef top round roast,,A roast cut from the beef top round.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000021,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef top round roast,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A roast cut from the beef top round.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0787,Brahui in Pakistan (SGDP),Brahui,A population made up of 2 samples from Brahui individuals recruited in Pakistan as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation South Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Brahui,,,,HANCESTRO:0787,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Brahui in Pakistan (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Brahui individuals recruited in Pakistan as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation South Asian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0788,Burusho in Pakistan (SGDP),Burusho,A population made up of 2 samples from Burusho individuals recruited in Pakistan as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation South Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Burusho,,,,HANCESTRO:0788,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Burusho in Pakistan (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Burusho individuals recruited in Pakistan as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation South Asian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0780,Hawaiian in USA (SGDP),Hawaiian,A population made up of 1 samples from Hawaiian individuals recruited in USA as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Oceanian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Hawaiian,,,,HANCESTRO:0780,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Hawaiian in USA (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 1 samples from Hawaiian individuals recruited in USA as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Oceanian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0789,Hazara in Pakistan (SGDP),Hazara,A population made up of 2 samples from Hazara individuals recruited in Pakistan as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation South Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Hazara,,,,HANCESTRO:0789,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Hazara in Pakistan (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Hazara individuals recruited in Pakistan as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation South Asian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0785,Bengali in Bangladesh (SGDP),Bengali,A population made up of 2 samples from Bengali individuals recruited in Bangladesh as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation South Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Bengali,,,,HANCESTRO:0785,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Bengali in Bangladesh (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Bengali individuals recruited in Bangladesh as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation South Asian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0786,Brahmin in India (SGDP),Brahmin,A population made up of 2 samples from Brahmin individuals recruited in India as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation South Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Brahmin,,,,HANCESTRO:0786,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Brahmin in India (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Brahmin individuals recruited in India as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation South Asian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0781,Igorot in Philippines (SGDP),Igorot,A population made up of 2 samples from Igorot individuals recruited in Philippines as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Oceanian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Igorot,,,,HANCESTRO:0781,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Igorot in Philippines (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Igorot individuals recruited in Philippines as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Oceanian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0784,Balochi in Pakistan (SGDP),Balochi,A population made up of 2 samples from Balochi individuals recruited in Pakistan as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation South Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Balochi,,,,HANCESTRO:0784,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Balochi in Pakistan (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Balochi individuals recruited in Pakistan as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation South Asian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0783,Papuan in Papua New Guinea (SGDP),Papuan,A population made up of 15 samples from Papuan individuals recruited in Papua New Guinea as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Oceanian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Papuan,,,,HANCESTRO:0783,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Papuan in Papua New Guinea (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 15 samples from Papuan individuals recruited in Papua New Guinea as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Oceanian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0782,Maori in New Zealand (SGDP),Maori,A population made up of 1 samples from Maori individuals recruited in New Zealand as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Oceanian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Maori,,,,HANCESTRO:0782,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Maori in New Zealand (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 1 samples from Maori individuals recruited in New Zealand as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Oceanian.,,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000410,negative likelihood ratio,,the likelihood ratio of negative results is a ratio which is formed  by dividing the difference between 1 and sensitivity of the test by the specificity value of a test. This can be expressed also as dividing the probability of a person who has the disease testing negative by the probability of a person who does not have the disease testing negative.,FALSE,,,,,,,likelihood ratio for negative results,,,,,,,,,,,,,,"adapted from Wikipedia:
https://en.wikipedia.org/wiki/Likelihood_ratios_in_diagnostic_testing

last accessed: May 2016",,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000410,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,negative likelihood ratio,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra,,,,the likelihood ratio of negative results is a ratio which is formed  by dividing the difference between 1 and sensitivity of the test by the specificity value of a test. This can be expressed also as dividing the probability of a person who has the disease testing negative by the probability of a person who does not have the disease testing negative.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_23232,chromenes,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:23232,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,chromenes,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03500030,enamel surface for corn (c-enamel),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=N0030,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03500030,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,enamel surface for corn (c-enamel),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470123,food sterilization by heating,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470123,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food sterilization by heating,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00005196,"populated place, Papua New Guinea",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00005196,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Papua New Guinea",http://purl.obolibrary.org/obo/GAZ_00003922,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000135,isolate sequence filename,,An isolate sequence filename is the file name (http://edamontology.org/data_1050) of the contig assembly file created by a bioinformatics assembly process.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000135,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,isolate sequence filename,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,An isolate sequence filename is the file name (http://edamontology.org/data_1050) of the contig assembly file created by a bioinformatics assembly process.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102204,colony forming units per grams total solids,,A unit of microbial density that describes the number of colony forming units within a gram of total solids in waste material.,FALSE,,,,,,,CFU/gTS,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102204,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2026-04-13T19:52:38.515Z,,,,,,,,,,,,,,,,,,,colony forming units per grams total solids,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A unit of microbial density that describes the number of colony forming units within a gram of total solids in waste material.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03450006,broiling or grilling,,Cooked without moisture under or over intense direct heat.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=G0006,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03450006,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,broiling or grilling,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Cooked without moisture under or over intense direct heat.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100289,host health complications at time of specimen collection,,A  personal health datum which specifies host health complications at time of specimen collection.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100289,,,,,,,,,,,,,,2022-01-31T23:52:14Z,,,,,,,,,,,,,http://purl.obolibrary.org/obo/OBI_0001619|http://purl.obolibrary.org/obo/NCIT_C2959,,,,,,host health complications at time of specimen collection,,,,,,,,,,,,,,,,,,,,,,,,,,,,0000-0002-9578-0788,,,,A  personal health datum which specifies host health complications at time of specimen collection.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001927,PacBio platform,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI SRA: PACBIO_SMRT,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001927,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PacBio platform,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001080,Salmonella serovar,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001080,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/NCBITaxon_590,,,,,,Salmonella serovar,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02021378,veal sub-primal cut (raw),,A raw veal sub-primal cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02021378,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,veal sub-primal cut (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw veal sub-primal cut.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001461,consensus sequence filename,consensus sequence filename|assembly filename,A data field which describes the user-defined filename of the FASTA file.,FALSE,,,,,,,PCDS:assembly_filename,,,,,,,,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,consensus sequence filename|assembly filename,consensus sequence filename slot,,,,GENEPIO:0001461,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,consensus sequence filename,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the user-defined filename of the FASTA file.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0004514,feces (environmental),,Feces which is deposited in the environment.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0004514,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-5275-8866,,,,,,,,,,,,,,,,,,,,feces (environmental),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Feces which is deposited in the environment.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001808,specimen title,,A specimen (or sample) title should be short and informative. Each specimen title must be unique in a submission.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"NCBI BioSample record documentation refers to a ""BioSample title"", stating that it is ""auto-generated if one is not supplied by the submitter.""  This is distinct from any assigned BioSession accession, or other ""external sample identifier"" that may have been issued by the source database or repository.",,,"1) Escherichia coli O104:H4 str. C227-11 clinical isolate 2010_333_NC-6
2) CD8+ T cells from female TSG6-knockout BALB/c mouse
3) Human metagenome isolated from urine of healthy female",,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001808,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,specimen title,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A specimen (or sample) title should be short and informative. Each specimen title must be unique in a submission.,,,,,,,,
http://www.ebi.ac.uk/efo/EFO_0004950,date of birth,,The point in time at which an individual was born.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SNOMEDCT:184099003,,,,,,,,,,,,,,,,,,,,,,,,,,,,,efo:EFO_0004950,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,date of birth,,,,,,,,,,,,,,,,,,,,,,,,,,,,Helen Parkinson,,,,The point in time at which an individual was born.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100601,breadth of coverage ratio,,A data item which is breadth of coverage datum as a ratio.,FALSE,,,,,,,,,,,,,,,,,,,,,Emma Griffiths,,,,,breadth of coverage ratio,,The breadth of coverage of the sequence of interest to the reference sequence was 3:4.,,,ready for release,http://purl.obolibrary.org/obo/OBI_0002881,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100601,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,breadth of coverage ratio,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-1107-9135,,,https://github.com/obi-ontology/obi/issues/1579,A data item which is breadth of coverage datum as a ratio.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470140,drum-drying,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0140,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470140,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,drum-drying,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001839,PulseNet submission standard,,"PulseNet, a national and international surveillance system used to identify and respond to foodborne disease outbreaks, has a standardized laboratory method and data submission standard for pathogen isolate typing test results and related isolate contextual data.  From this information clusters of disease can be identified that might represent unrecognized outbreaks.",FALSE,,,,,,,Pulse Net International BioSample Metadata,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000123,PulseNet,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001839,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PulseNet submission standard,,,,,,,,,,,,,,,,,,,,,,https://www.nml-lnm.gc.ca/Pulsenet/index-eng.htm|https://www.cdc.gov/pulsenet/pathogens/index.html,,,,,,,,http://www.pulsenetinternational.org/,,"PulseNet, a national and international surveillance system used to identify and respond to foodborne disease outbreaks, has a standardized laboratory method and data submission standard for pathogen isolate typing test results and related isolate contextual data.  From this information clusters of disease can be identified that might represent unrecognized outbreaks.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03480020,food packing medium,,"The medium in which the food is packed for preservation and handling or the medium surrounding homemade foods, e.g., peaches cooked in sugar syrup. The packing medium may provide a controlled environment for the food. It may also serve to improve palatability and consumer appeal.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=K0020,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03480020,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food packing medium,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The medium in which the food is packed for preservation and handling or the medium surrounding homemade foods, e.g., peaches cooked in sugar syrup. The packing medium may provide a controlled environment for the food. It may also serve to improve palatability and consumer appeal.",,,,food packing medium,,,,
http://purl.obolibrary.org/obo/CHEBI_25806,oxygen molecular entity,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:25806,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,oxygen molecular entity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00004285,meat strip,,"A cut of meat which is long, narrow and boneless.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00004285,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,meat strip,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A cut of meat which is long, narrow and boneless.",,,,,,,,
http://purl.obolibrary.org/obo/HP_0000271,Abnormality of the face,Abnormality of the visage|Abnormality of the physiognomy|Abnormality of the countenance,An abnormality of the face.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4025871|UMLS:C1290857|UMLS:C0266617|SNOMEDCT_US:398302004|SNOMEDCT_US:398206004|SNOMEDCT_US:32003007|SNOMEDCT_US:118930001,,,,,,,,,,,,,,,,,,,,,,,,Abnormality of the visage|Abnormality of the physiognomy|Abnormality of the countenance,Facial abnormality|Abnormality of the face|Abnormal face,,,,HP:0000271,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,http://purl.oboInOwllibrary.org/oboInOwl/hp#hposlim_core,,,,,,,,Abnormality of the face,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An abnormality of the face.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100229,travel exposure process,,A process occuring as a result of travel that exposes the recipient organism to a material entity.,FALSE,,,,,,,Travel Exposure,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100229,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,travel exposure process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A process occuring as a result of travel that exposes the recipient organism to a material entity.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0060508,orange allergy,,A fruit allergy triggered by Citrus sinensis plant fruit food product.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0060508,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,orange allergy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A fruit allergy triggered by Citrus sinensis plant fruit food product.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0060502,gastrointestinal allergy,,An allergic disease that is located_in the gastrointestinal tract.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0060502,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,gastrointestinal allergy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An allergic disease that is located_in the gastrointestinal tract.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0060503,fruit allergy,,A food allergy triggered by a plant fruit product.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0060503,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,fruit allergy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A food allergy triggered by a plant fruit product.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0060504,apple allergy,,A fruit allergy triggered by Malus domestica plant fruit food product.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0060504,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,apple allergy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A fruit allergy triggered by Malus domestica plant fruit food product.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0060506,cherry allergy,,A fruit allergy triggered by Prunus avium plant fruit food product.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0060506,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,cherry allergy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A fruit allergy triggered by Prunus avium plant fruit food product.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0060509,melon allergy,,A fruit allergy triggered by Cucumis melo plant fruit food product.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0060509,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,melon allergy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A fruit allergy triggered by Cucumis melo plant fruit food product.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0060507,Indian plum allergy,,A fruit allergy triggered by Ziziphus mauritiana plant fruit food product.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0060507,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,Indian plum allergy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A fruit allergy triggered by Ziziphus mauritiana plant fruit food product.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0060505,apricot allergy,,A fruit allergy triggered by Prunus armeniaca plant fruit food product.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0060505,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,apricot allergy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A fruit allergy triggered by Prunus armeniaca plant fruit food product.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001787,genus of pathogen,,This is the genus-level taxonomic name of an organism playing a pathogen role,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001787,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/NCBITaxon_genus,,,,,,genus of pathogen,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,This is the genus-level taxonomic name of an organism playing a pathogen role,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0050456,Buruli ulcer disease,,"A primary bacterial infectious disease that results_in infection located_in skin or located_in subcutaneous tissue, has_material_basis_in Mycobacterium ulcerans, which could be transmitted_by insects. The bacterium produces a toxin, named mycolactone, which causes subcutaneous fat necrosis and inhibits an immune response. The infection has_symptom nodule, which is a painless, mobile swelling in the skin.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0050456,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,Buruli ulcer disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A primary bacterial infectious disease that results_in infection located_in skin or located_in subcutaneous tissue, has_material_basis_in Mycobacterium ulcerans, which could be transmitted_by insects. The bacterium produces a toxin, named mycolactone, which causes subcutaneous fat necrosis and inhibits an immune response. The infection has_symptom nodule, which is a painless, mobile swelling in the skin.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C35743,Non-Neoplastic Thoracic Disorder,Non-Neoplastic Thoracic Disorder|Non-Neoplastic Thoracic Disease,"A non-neoplastic disorder that affects the thorax and/or the organs of the thoracic cavity.  Representative examples include pleural infection, mediastinitis, pneumonia, and chronic obstructive pulmonary disease.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Non-Neoplastic Thoracic Disorder|Non-Neoplastic Thoracic Disease,,,,NCIT:C35743,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Non-Neoplastic Thoracic Disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A non-neoplastic disorder that affects the thorax and/or the organs of the thoracic cavity.  Representative examples include pleural infection, mediastinitis, pneumonia, and chronic obstructive pulmonary disease.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490229,thermoplastic adhesive,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0229,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490229,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,thermoplastic adhesive,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000143,public health lab epidemiology contextual data standard,,This model contains data type specifications for whole genome sequencing and epidemiology investigation contextual data.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000143,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public health lab epidemiology contextual data standard,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,This model contains data type specifications for whole genome sequencing and epidemiology investigation contextual data.,,,,,,,,
http://purl.obolibrary.org/obo/OBA_2040165,age of onset of cognitive disorder,age cognitive disorder symptoms begin|age at onset of cognitive disorder,The age at which cognitive disorder manifestations first appear.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,age cognitive disorder symptoms begin|age at onset of cognitive disorder,,,,OBA:2040165,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age of onset of cognitive disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The age at which cognitive disorder manifestations first appear.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001107,phenotype or genotype project,,Phenotype or Genotype: project correlating phenotype and genotype,FALSE,,,,,,,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/books/NBK54364/,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001107,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,phenotype or genotype project,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,Phenotype or Genotype: project correlating phenotype and genotype,,,,,,,,
http://purl.obolibrary.org/obo/ARO_3004404,automated testing platform vendor,,Vendor of automated system of analysis for determining antimicrobial susceptibility.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ARO:3004404,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/aro.owl,,,,,,,,,automated testing platform vendor,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Vendor of automated system of analysis for determining antimicrobial susceptibility.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00010410,"populated place, Paraguay",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00010410,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Paraguay",http://purl.obolibrary.org/obo/GAZ_00002933,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0037522,ileal lymph node,ileal node|ileal mesentary lymph node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:16617,,,,,,,,,,,,,,,,,,,,,,,,,ileal node|ileal mesentary lymph node,,,,UBERON:0037522,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,ileal lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0037528,inferior pancreaticoduodenal lymph node,inferior pancreaticoduodenal node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:16625,,,,,,,,,,,,,,,,,,,,,,,,,inferior pancreaticoduodenal node,,,,UBERON:0037528,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,inferior pancreaticoduodenal lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0037521,preterminal colic lymph node,preterminal colic node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:16616,,,,,,,,,,,,,,,,,,,,,,,,,preterminal colic node,,,,UBERON:0037521,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,preterminal colic lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0037527,superior pancreaticoduodenal lymph node,superior pancreaticoduodenal node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:16624,,,,,,,,,,,,,,,,,,,,,,,,,superior pancreaticoduodenal node,,,,UBERON:0037527,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,superior pancreaticoduodenal lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000327,pork arm roast (raw),,A raw pork arm roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000327,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pork arm roast (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw pork arm roast.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00002454,food material by characteristic,,Food material which has been categorized by a characteristic such as granularity or temperature.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00002454,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food material by characteristic,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Food material which has been categorized by a characteristic such as granularity or temperature.,,,,,,,,
http://purl.obolibrary.org/obo/ARO_3007397,Swedish Reference Group for Antibiotics (SIR),,SIR is a revised system for antibiotic sensitivity testing in Sweden that was proposed in 1977. The SIR system included two main changes: three sensitivity groups instead of the previous four and new breakpoints for the sensitivity groups.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ARO:3007397,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/aro.owl,,,,,,,,,Swedish Reference Group for Antibiotics (SIR),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SIR is a revised system for antibiotic sensitivity testing in Sweden that was proposed in 1977. The SIR system included two main changes: three sensitivity groups instead of the previous four and new breakpoints for the sensitivity groups.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002136,EBI European Nucleotide Archive Webin,,"The European Nucleotide Archive (ENA) provides a comprehensive record of the world's nucleotide sequencing information, covering raw sequencing data, sequence assembly information and functional annotation. Webin is an ENA interface and standard for sequence submissions.",FALSE,,,,,,,,,,,,,,,,,,,,,https://www.ebi.ac.uk/ena,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002136,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,EBI European Nucleotide Archive Webin,,,,,,,,,,,,,,,,,,,,,,https://www.ebi.ac.uk/ena/WebFeat/,,,,,,,,,,"The European Nucleotide Archive (ENA) provides a comprehensive record of the world's nucleotide sequencing information, covering raw sequencing data, sequence assembly information and functional annotation. Webin is an ENA interface and standard for sequence submissions.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_23066,cephalosporin,,"A class of β-lactam antibiotics differing from the penicillins in having a 6-membered, rather than a 5-membered, side ring.  Although cephalosporins are among the most commonly used antibiotics in the treatment of routine infections, and their use is increasing over time, they can cause a range of hypersensitivity reactions, from mild, delayed-onset cutaneous reactions to life-threatening anaphylaxis in patients with immunoglobulin E (IgE)-mediated allergy.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:3538,,,,,,CHEBI:23066,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,cephalosporin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A class of β-lactam antibiotics differing from the penicillins in having a 6-membered, rather than a 5-membered, side ring.  Although cephalosporins are among the most commonly used antibiotics in the treatment of routine infections, and their use is increasing over time, they can cause a range of hypersensitivity reactions, from mild, delayed-onset cutaneous reactions to life-threatening anaphylaxis in patients with immunoglobulin E (IgE)-mediated allergy.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530123,caparacon,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530123,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,caparacon,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_46845,N-alkylpiperazine,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:46845,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,N-alkylpiperazine,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001258,symptom history item,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001258,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,symptom history item,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_29665,pikromycin,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:29665,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,pikromycin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490332,saturated (immersed) paper container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0332,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490332,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,saturated (immersed) paper container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0037536,promontory lymph node,promontory node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:16645,,,,,,,,,,,,,,,,,,,,,,,,,promontory node,,,,UBERON:0037536,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,promontory lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0037533,intermediate common iliac lymph node,intermediate common iliac node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:16642,,,,,,,,,,,,,,,,,,,,,,,,,intermediate common iliac node,,,,UBERON:0037533,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,intermediate common iliac lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0037530,inferior pancreatic lymph node,no. 18 pancreaticoduodenal lymph node|no. 18 pancreatic lymph node|jPS no. 18 node|jPS 18 node|inferior pancreatiosplenic lymph node|inferior pancreatic node,Pancreaticosplenioc lymph node located along the inferior margin of pancreas.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:16628,,,,,,,,,,,,,,,,,,,,,,,,,no. 18 pancreaticoduodenal lymph node|no. 18 pancreatic lymph node|jPS no. 18 node|jPS 18 node|inferior pancreatiosplenic lymph node|inferior pancreatic node,,,,UBERON:0037530,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,inferior pancreatic lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Pancreaticosplenioc lymph node located along the inferior margin of pancreas.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0037532,medial common iliac lymph node,medial common iliac node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:16641,,,,,,,,,,,,,,,,,,,,,,,,,medial common iliac node,,,,UBERON:0037532,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,medial common iliac lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0037534,lateral common iliac lymph node,lateral common iliac node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:16643,,,,,,,,,,,,,,,,,,,,,,,,,lateral common iliac node,,,,UBERON:0037534,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,lateral common iliac lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0037538,medial external iliac lymph node,medial external iliac node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:16647,,,,,,,,,,,,,,,,,,,,,,,,,medial external iliac node,,,,UBERON:0037538,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,medial external iliac lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0037531,intestinal lymph node,visceral lumbar lymph node|intestinal node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:16629,,,,,,,,,,,,,,,,,,,,,,,,,visceral lumbar lymph node|intestinal node,,,,UBERON:0037531,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,intestinal lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0037539,intermediate external iliac lymph node,intermediate external iliac node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:16648,,,,,,,,,,,,,,,,,,,,,,,,,intermediate external iliac node,,,,UBERON:0037539,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,intermediate external iliac lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0037535,subaortic common iliac lymph node,subaortic lymph node|subaortic common iliac node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:16644,,,,,,,,,,,,,,,,,,,,,,,,,subaortic lymph node|subaortic common iliac node,,,,UBERON:0037535,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,subaortic common iliac lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100427,alternative sample id,alternative_sample_ID|alternative sample identifier|alternative sample ID,An identifier field which describes an alternative sample identifier assigned to the sample by another organization.,FALSE,,,,,,,PCDS:alternative_sample_id,,,,,,,"PCDS: Alternative identifiers assigned to the sample should be tracked along with original IDs to establish chain of custody. Alternative sample IDs should be provided in the in a prescribed format which consists of the ID followed by square brackets (no space in between the ID and bracket) containing the short form of ID provider's agency name i.e. ID[short organization code]. Multiple identifiers can be provided and separated by semi-colons. If the information is unknown or cannot be provided, leave blank or provide a null value.",,,,,,,,,,,,,,PCDS: ABCD1234[PHAC]; 12345rev[CFIA],,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,alternative_sample_ID|alternative sample identifier|alternative sample ID,alternative sample identifier slot|alternative sample identifier field|alternative sample ID slot,,,,GENEPIO:0100427,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,alternative sample id,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An identifier field which describes an alternative sample identifier assigned to the sample by another organization.,,PCDS: An alternative sample_ID assigned to the sample by another organization.,,,,,,
http://purl.obolibrary.org/obo/NCIT_C97325,Manufactured Object,Manufactured Object,A physical object created by hand or machine.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Manufactured Object,,,,NCIT:C97325,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Manufactured Object,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A physical object created by hand or machine.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0003826,Stillbirth,Stillborn|Stillbirth|Late foetal death|Late fetal death,Death of the fetus in utero after at least 22 weeks of gestation.,FALSE,,,,,,,,,,,,,,The age at which fetal demise is legally classified asa a miscarriage varies between countries with the US being 20 gestational weeks and the UK being 24 gestational weeks. The HPO chooses the average of these age ranges.,,,,,,,,,,,,,,,,,,UMLS:C0595939|UMLS:C0015927|SNOMEDCT_US:276507005|SNOMEDCT_US:237364002,,,,,,,,,,,,,,,,,,,,,,,HP:0001625|HP:0001624,,Stillborn|Stillbirth|Late foetal death|Late fetal death,,,,HP:0003826,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,Stillbirth,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Death of the fetus in utero after at least 22 weeks of gestation.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490287,aluminum box,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0287,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490287,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,aluminum box,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_26912,oxolanes,,Any oxacycle having an oxolane (tetrahydrofuran) skeleton.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:26912,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,oxolanes,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any oxacycle having an oxolane (tetrahydrofuran) skeleton.,,,,,,,,
http://purl.obolibrary.org/obo/MPATH_105,circulatory disorder,,"Lesions leading to or consequent on failure of, or atypical movement of, blood throughout the body.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MPATH:105,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mpath.owl,,,,,,,,,circulatory disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Lesions leading to or consequent on failure of, or atypical movement of, blood throughout the body.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002152,genomic sequence length specification,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002152,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,genomic sequence length specification,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HP_0006561,Lipid accumulation in hepatocytes,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C1837257,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0006561,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Lipid accumulation in hepatocytes,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C19683,Personal Behavior,Personal Conduct|Personal Behavior,The observable response of a person.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Personal Conduct|Personal Behavior,,,,NCIT:C19683,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Personal Behavior,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The observable response of a person.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000173,beef sirloin bavette steak,,A steak cut from the beef sirloin bavette flap.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000173,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef sirloin bavette steak,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A steak cut from the beef sirloin bavette flap.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100742,physical characterization data tag,physical characterization data type|physical characterization attribute bundle,A dataset attribute bundle which indicates the presence of physical characterization data.,FALSE,,,,,,,physical characterization,,,,,,,Example Guidance: Use this tag to indicate additional data is available that provides characterization information from physical properties.,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,physical characterization data type|physical characterization attribute bundle,,,,GENEPIO:0100742,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-05-18T19:08:34.869Z,,,,,,,,,,,,,,,,,,,physical characterization data tag,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A dataset attribute bundle which indicates the presence of physical characterization data.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000034,beef sirloin tip side steak (raw),,A raw beef sirloin tip side steak.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000034,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef sirloin tip side steak (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef sirloin tip side steak.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0001087,pleural fluid,,Transudate contained in the pleural cavity.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ncithesaurus:Pleural_Fluid|Wikipedia:Pleural_fluid|MAT:0000500|MA:0002532|FMA:12273|BTO:0003080,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0001087,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,pleural fluid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Transudate contained in the pleural cavity.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0001088,urine,,Excretion that is the output of a kidney.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:Urine|Wikipedia:Urine|UMLS:C0042036|NCIT:C13283|MIAA:0000058|MESH:D014556|MAT:0000058|MA:0002545|GAID:1189|FMA:12274|ENVO:00002047|EMAPA:36554|EFO:0001939|CALOHA:TS-1092|BTO:0001419,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0001088,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,urine,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Excretion that is the output of a kidney.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0001089,sweat,,Secretion produced by a sweat gland.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Sweat|UMLS:C0038984|NCIT:C13280|MESH:D013542|MA:0002539|GAID:1172|FMA:12275|ENVO:02000025|BTO:0001254,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0001089,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,sweat,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Secretion produced by a sweat gland.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001473,exposure history item,,"An exposure can be narrowed down to a single date, or can be reasoned to exist with a lower and/or upper bound date.  A single date exposure has lower and upper bound dates set as the same value.",FALSE,,,,,,,,,,,,,,"An exposure can be narrowed down to a single date, or can be reasoned to exist with a lower and/or upper bound date.  A single date exposure has lower and upper bound dates set as the same value.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001473,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,exposure history item,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HP_0012735,Cough,Coughing|Cough,"A sudden, audible expulsion of air from the lungs through a partially closed glottis, preceded by inhalation.",FALSE,,,,,,,,,,,,,,"The European Respiratory Society Task Force recommended two possible definitions of cough: (1) A three-phase expulsive motor act characterized by an inspiratory effort (inspiratory phase) followed by a forced expiratory effort against a closed glottis (compressive phase) and then by opening of the glottis and rapid expiratory airflow (expulsive phase);and (2) A forced expiratory maneuver, usually against a closed glottis and associated with a characteristic sound. The term Cough or any of its more specific descendents can be modified by the terms Acute (HP:0011009), Subacute (HP:0011011), and Chronic (HP:0011010). In adults, an acute cough lasts less than 3 weeks, a subacute cough from 3 to 8 weeks, and a chronic cough longer than 8 weeks. In children aged less than 15 years a chronic cough is defined as a daily cough lasting for over 4 weeks.",,,,,,,,,,,,,,,,,,UMLS:C0010200|SNOMEDCT_US:49727002|SNOMEDCT_US:272039006|SNOMEDCT_US:263731006,,,,,,,,,,,,,,,,,,,,,,,,,Coughing|Cough,,,,HP:0012735,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Cough,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A sudden, audible expulsion of air from the lungs through a partially closed glottis, preceded by inhalation.",,,,,,,,
http://purl.obolibrary.org/obo/GO_0003674,molecular_function,molecular function,"A molecular process that can be carried out by the action of a single macromolecular machine, usually via direct physical interactions with other molecular entities. Function in this sense denotes an action, or activity, that a gene product (or a complex) performs.",FALSE,,,,,,,,,,,,,,"Note that, in addition to forming the root of the molecular function ontology, this term is recommended for the annotation of gene products whose molecular function is unknown. When this term is used for annotation, it indicates that no information was available about the molecular function of the gene product annotated as of the date the annotation was made; the evidence code 'no data' (ND), is used to indicate this. Despite its name, this is not a type of 'function' in the sense typically defined by upper ontologies such as Basic Formal Ontology (BFO). It is instead a BFO:process carried out by a single gene product or complex.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GO:0005554,,molecular function,,,,GO:0003674,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/go.owl,http://purl.oboInOwllibrary.org/oboInOwl/go#goslim_yeast|http://purl.oboInOwllibrary.org/oboInOwl/go#goslim_plant|http://purl.oboInOwllibrary.org/oboInOwl/go#goslim_pir|http://purl.oboInOwllibrary.org/oboInOwl/go#goslim_metagenomics|http://purl.oboInOwllibrary.org/oboInOwl/go#goslim_chembl|http://purl.oboInOwllibrary.org/oboInOwl/go#goslim_candida,,,,,,,,molecular_function,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A molecular process that can be carried out by the action of a single macromolecular machine, usually via direct physical interactions with other molecular entities. Function in this sense denotes an action, or activity, that a gene product (or a complex) performs.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00001176,invertebrate food product,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00001176,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,invertebrate food product,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100465,isolation date,isolation_date|isolation date|isolate collection date,A date field which describes the date on which the isolate was isolated from a sample.,FALSE,,,,,,,PCDS:isolation_date,,,,,,,"PCDS: Provide the date according to the ISO 8601 standard 'YYYY-MM-DD', 'YYYY-MM' or 'YYYY'.",,,,,,,,,,,,,,PCDS: 2020-10-30,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,isolation_date|isolation date|isolate collection date,isolation date slot|isolate collection date slot|isolate collection date field,,,,GENEPIO:0100465,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,isolation date,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A date field which describes the date on which the isolate was isolated from a sample.,,PCDS: The date on which the isolate was isolated from a sample.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100020,multi-jurisdictional outbreak investigation strategy,,An outbreak investigation sampling strategy in which individuals are chosen for investigation into a disease outbreak that has connections to two or more jurisdictions.,FALSE,,,,,,,Multi-jurisdictional outbreak investigation,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100020,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,multi-jurisdictional outbreak investigation strategy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An outbreak investigation sampling strategy in which individuals are chosen for investigation into a disease outbreak that has connections to two or more jurisdictions.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490321,casein resin,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0321,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490321,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,casein resin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000322,pork shoulder,,Upper foreleg of a pig that extends from elbow to blade bone.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000322,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pork shoulder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Upper foreleg of a pig that extends from elbow to blade bone.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510251,man as food consumer,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0251,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510251,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,man as food consumer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001111,transcriptome or gene expression,,"Transcriptome or Gene expression: large scale RNA sequencing or expression analysis. Includes cDNA, EST, RNA_seq, and microarray.",FALSE,,,,,,,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/books/NBK54364/,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001111,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,transcriptome or gene expression,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"Transcriptome or Gene expression: large scale RNA sequencing or expression analysis. Includes cDNA, EST, RNA_seq, and microarray.",,,,,,,,
http://purl.obolibrary.org/obo/OBI_0000789,survival rate,,A rate that represents the percentage of people or animals in a study or treatment group who are alive for a given period of time after diagnosis or initiation of monitoring.,FALSE,,,,,,,,,,,,,,,,,,,,,"adapted from wikipedia
http://en.wikipedia.org/wiki/Survival_rate",,,,,survival rate,,,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0000789,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,survival rate,,,,,,,,,,,,,,,,,,,,,,,,,,,,Oliver He,,,,A rate that represents the percentage of people or animals in a study or treatment group who are alive for a given period of time after diagnosis or initiation of monitoring.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0013474,middle part of esophagus,,The middle one third of the esophagus in which the muscle layer is composed of muscle cells of the striated and smooth types.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0227189|SCTID:276802008|NCIT:C12254,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0013474,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,middle part of esophagus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The middle one third of the esophagus in which the muscle layer is composed of muscle cells of the striated and smooth types.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0013473,lower esophagus,esophagus distal third,The lower one third of the esophagus in which the muscle layer is composed of muscle cells predominantly of the smooth type.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0227191|SCTID:362129001|NCIT:C12255,,,,,,,,,,,,,,,,,,,,,,,,,esophagus distal third,,,,UBERON:0013473,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,lower esophagus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The lower one third of the esophagus in which the muscle layer is composed of muscle cells predominantly of the smooth type.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0013472,upper esophagus,,The upper one third of esophagus in which the muscle layer is composed of muscle cells of the striated type.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0227187|SCTID:276801001|NCIT:C12253,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0013472,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,upper esophagus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The upper one third of esophagus in which the muscle layer is composed of muscle cells of the striated type.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000329,pork shoulder blade (raw),,A raw pork shoulder blade cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000329,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pork shoulder blade (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw pork shoulder blade cut.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0001250,Seizure,Seizures|Epileptic seizure,A seizure is an intermittent abnormality of nervous system physiology characterized by a transient occurrence of signs and/or symptoms due to abnormal excessive or synchronous neuronal activity in the brain.,FALSE,,,,,,,,,,,,,,"A type of electrographic seizure has been proposed in neonates which does not have a clinical correlate, it is electrographic only. The term epilepsy is not used to describe recurrent febrile seizures. Epilepsy presumably reflects an abnormally reduced seizure threshold.",,,,,,,,,,,,,,,,,,UMLS:C0036572|UMLS:C0014544|SNOMEDCT_US:91175000|SNOMEDCT_US:84757009|SNOMEDCT_US:313307000|SNOMEDCT_US:246545002|SNOMEDCT_US:128613002,,,,,,,,,,,,,,,,,,,,,,,HP:0010520|HP:0006997|HP:0002794|HP:0002479|HP:0002466|HP:0002437|HP:0002434|HP:0002432|HP:0002431|HP:0002430|HP:0002417|HP:0002391|HP:0002348|HP:0002306|HP:0002279|HP:0002182|HP:0002125|HP:0001303|HP:0001275,,Seizures|Epileptic seizure,,,,HP:0001250,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Seizure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A seizure is an intermittent abnormality of nervous system physiology characterized by a transient occurrence of signs and/or symptoms due to abnormal excessive or synchronous neuronal activity in the brain.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0001259,Coma,Unconsciousness|Stupor|Persistent vegetative state|Coma,"The complete absence of wakefulness and consciousness, which is evident through a lack of response to any form of external stimuli.",FALSE,,,,,,,,,,,,,,Coma is generally a result of diffuse or extensive involvement of both hemispheres of the brain or lesions in the brainstem.,,,,,,,,,,,,,,,,,,UMLS:C0009421|SNOMEDCT_US:371632003|ICD-10:R40.2,,,,,,,,,,,,,,,,,,,,,,,,,Unconsciousness|Stupor|Persistent vegetative state|Coma,,,,HP:0001259,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Coma,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The complete absence of wakefulness and consciousness, which is evident through a lack of response to any form of external stimuli.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03500033,polyester surface,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=N0033,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03500033,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,polyester surface,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000276,lamb foreshank (raw),,A raw lamb foreshank.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000276,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lamb foreshank (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw lamb foreshank.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020470,piece of turkey meat (with bone),,A piece of turkey meat that contains bone material.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020470,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of turkey meat (with bone),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A piece of turkey meat that contains bone material.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490129,paperboard tray with wrapper,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0129,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490129,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,paperboard tray with wrapper,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00013579,"populated place, Andorra",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00013579,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Andorra",http://purl.obolibrary.org/obo/GAZ_00002948,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C48531,Pound,pound (US and British)|pound|lb_av|lb|[lb_av]|Pounds|Pound|POUND|LB|Avoirdupois Pound,"The traditional unit of mass. By international agreement, one avoirdupois pound is equal to exactly 0.45359237 kilogram, 16 ounces, or 1.21528 troy pounds.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,pound (US and British)|pound|lb_av|lb|[lb_av]|Pounds|Pound|POUND|LB|Avoirdupois Pound,,,,NCIT:C48531,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Pound,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The traditional unit of mass. By international agreement, one avoirdupois pound is equal to exactly 0.45359237 kilogram, 16 ounces, or 1.21528 troy pounds.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0002530,gland,glandular organ,An organ that functions as a secretory or excretory organ.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:Gland|WikipediaCategory:Glands|Wikipedia:Gland|UMLS:C1285092|SCTID:134358001|NCIT:C13319|MIAA:0000021|MAT:0000021|MA:0003038|HAO:0000375|FMA:86294|FMA:7146|FBbt:00100317|EMAPA:18425|EHDAA:2161|EHDAA2:0003096|EFO:0000797|BTO:0000522|AEO:0000096|AAO:0000212,,,,,,,,,,,,,,,,,,,,,,,,,glandular organ,,,,UBERON:0002530,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,gland,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An organ that functions as a secretory or excretory organ.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03311865,piece of chicken (raw),,A raw piece of chicken.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://bioregistry.io/reference/siren:F11865,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03311865,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of chicken (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw piece of chicken.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100434,presampling activity details,presampling_activity_details|presampling activity details,A data field which describes the details of the activities or variables introduced upstream of sample collection that may affect the sample collected.,FALSE,,,,,,,PCDS:presampling_activity_details,,,,,,,PCDS: Briefly describe the presampling details using free text.,,,,,,,,,,,,,,PCDS: Patient was previously infected. Sample taken during convalescence.,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,presampling_activity_details|presampling activity details,presampling activity details slot,,,,GENEPIO:0100434,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,presampling activity details,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the details of the activities or variables introduced upstream of sample collection that may affect the sample collected.,,PCDS: The details of the activities or variables that affected the sample collected.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100815,fecal contamination value,fecal contamination value|faecal contamination value,An environmental data field which describes the numerical value of a measurement of fecal contamination.,FALSE,,,,,,,PCDS:fecal_contamination_value,,,,,,,PCDS: Provide the numerical value of the measured fecal contamination.,,,,,,,,,,,,,,PCDS: 10,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,fecal contamination value|faecal contamination value,fecal contamination value slot|faecal contamination value slot,,,,GENEPIO:0100815,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,fecal contamination value,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the numerical value of a measurement of fecal contamination.,,PCDS: The numerical value of a measurement of fecal contamination.,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_1385377,Mus musculus gansuensis,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,Mus musculus gansuensis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:1385377,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Mus musculus gansuensis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002150,MIC diffusion measurement specification,,A value specification for a MIC test measurement resulting from a laboratory diffusion method.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/UO_0000016,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002150,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ARO_3004391,,,,,,MIC diffusion measurement specification,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ARO_3004371,,,,Damion Dooley,,,,A value specification for a MIC test measurement resulting from a laboratory diffusion method.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100204,clinic exposure process,,A process occuring within or in the vicinity of a medical clinic that exposes the recipient organism to a material entity.,FALSE,,,,,,,Clinic,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100204,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,clinic exposure process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A process occuring within or in the vicinity of a medical clinic that exposes the recipient organism to a material entity.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001084,incarceration status,,"",FALSE,,,,,,,,,,,,,,,,,,,,,"",,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001084,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,incarceration status,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001226,lifespan history record,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001226,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,lifespan history record,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510010,laboratory animal as food consumer,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0010,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510010,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,laboratory animal as food consumer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102155,PacBio Onso,,A PacBio sequencing instrument model which utilizes sequencing by binding (SBB) chemistry to produce short-read sequencing and is designed for benchtop.,FALSE,,,,,,,,,,,,,,,,,,,,,https://www.pacb.com/onso/,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102155,,,,,,,,,,,,,https://orcid.org/0000-0002-7654-6902|https://orcid.org/0000-0001-8008-8249,2025-03-21T01:14:47.111Z,,,,,,,,,,,,,,,,,,,PacBio Onso,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A PacBio sequencing instrument model which utilizes sequencing by binding (SBB) chemistry to produce short-read sequencing and is designed for benchtop.,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_2759,Eukaryota,,,FALSE,,,,,,,eukaryotes,,,,,,,,,,,,,,,,,,,Eukaryota,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:2759,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Eukaryota,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_9159,gas gangrene,,"A commensal bacterial infectious disease that results in infection, located in muscle tissue, has_material_basis_in Clostridium perfringens, which produce gas that becomes trapped in the infected tissue. Gas gangrene usually develops after injuries or surgery. The infection has symptom large blisters, has symptom pain in the infected area, has symptom myonecrosis, has symptom gas production, and has symptom sepsis.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:9159,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,gas gangrene,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A commensal bacterial infectious disease that results in infection, located in muscle tissue, has_material_basis_in Clostridium perfringens, which produce gas that becomes trapped in the infected tissue. Gas gangrene usually develops after injuries or surgery. The infection has symptom large blisters, has symptom pain in the infected area, has symptom myonecrosis, has symptom gas production, and has symptom sepsis.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510080,salt free claim,,Food having less than 5 milligrams salt per amount customarily consumed (or for meals and main dishes less than 5 milligrams salt per labeled serving). Such food must contain no ingredient that is salt or generally understood to contain salt except where the ingredient listed is footnoted '*adds a trivial amount of salt'.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0080,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510080,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,salt free claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Food having less than 5 milligrams salt per amount customarily consumed (or for meals and main dishes less than 5 milligrams salt per labeled serving). Such food must contain no ingredient that is salt or generally understood to contain salt except where the ingredient listed is footnoted '*adds a trivial amount of salt'.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001060,train travel,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001060,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,train travel,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HP_0041051,Ageusia,Lost taste|Impaired taste sensation|Absent sense of taste,A rare condition that is characterized by a complete loss of taste function of the tongue.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Lost taste|Impaired taste sensation|Absent sense of taste,,,,HP:0041051,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Ageusia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A rare condition that is characterized by a complete loss of taste function of the tongue.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_6005380,insect pharynx,,Section of the insect foregut anterior to the esophagus.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FBbt:00005380,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:6005380,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,insect pharynx,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Section of the insect foregut anterior to the esophagus.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00002699,Kingdom of Norway,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00002699,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Kingdom of Norway,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002118,exudate collection,,The process of collecting bodily fluids that have been discharged from blood vessels usually arising from inflammation or injury.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002118,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,exudate collection,,,,,,,,,,,,,,,,,,,,,,,,,,,,Emma Griffiths,,,,The process of collecting bodily fluids that have been discharged from blood vessels usually arising from inflammation or injury.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490193,"plastic container, blow-molded",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0193,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490193,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"plastic container, blow-molded",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_24651,hydroxides,,Hydroxides are chemical compounds containing a hydroxy group or salts containing hydroxide (OH<small><sup>−</small></sup>).,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:24651,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,hydroxides,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Hydroxides are chemical compounds containing a hydroxy group or salts containing hydroxide (OH<small><sup>−</small></sup>).,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C25381,Maiden Name,Maiden Name|Maiden,A woman's surname before marriage.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Maiden Name|Maiden,,,,NCIT:C25381,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Maiden Name,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A woman's surname before marriage.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001871,geographic coordinate,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/OBI_0001621|http://purl.obolibrary.org/obo/OBI_0001620|http://purl.obolibrary.org/obo/GEO_000000788,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001871,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,geographic coordinate,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001158,sample collector contact address,sample collector contact address,A data field which describes the mailing address of the agency submitting the sample.,FALSE,,,,,,,PCDS:sample_collector_contact_address,,,,,,,"PCDS: The mailing address should be in the format: Street number and name, City, Province/Territory, Postal Code, Country",,,,,,,,,,,,,,"PCDS: 655 Lab St, Vancouver, British Columbia, V5N 2A2, Canada",,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,sample collector contact address,sample collector contact address slot,,,,GENEPIO:0001158,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,sample collector contact address,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the mailing address of the agency submitting the sample.,,PCDS: The mailing address of the agency submitting the sample.,,,,,,
http://purl.obolibrary.org/obo/OBA_2001009,age of onset of Parkinson disease,age at onset of Parkinson disease|age Parkinson disease symptoms begin,The age at which Parkinson disease manifestations first appear.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,age at onset of Parkinson disease|age Parkinson disease symptoms begin,,,,OBA:2001009,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age of onset of Parkinson disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The age at which Parkinson disease manifestations first appear.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000486,building floor,,A building floor is a surface layer which is part of a building and used for walking.,FALSE,,,,,,,,,,,,,,"To be more precise, a subfloor and a floor covering may be specified. Please request these classes and propose definitions if they are needed.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01000486,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,building floor,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A building floor is a surface layer which is part of a building and used for walking.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_38101,organonitrogen heterocyclic compound,,Any organonitrogen compound containing a cyclic component with nitrogen and at least one other element as ring member atoms.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:38101,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,organonitrogen heterocyclic compound,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any organonitrogen compound containing a cyclic component with nitrogen and at least one other element as ring member atoms.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000402,beef tenderloin (raw),,A raw beef tenderloin.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000402,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef tenderloin (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef tenderloin.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00008386,"populated place, Georgia",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00008386,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Georgia",http://purl.obolibrary.org/obo/GAZ_00004942,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001862,latitude specification (ISO 6709),,A decimal latitude measurement in degrees in conformance with the ISO 6709 standard.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"This is failing Hermit reasoner since it rejects totalDigits, and fractionDigits: 
'has primitive data type' exactly 1 xsd:decimal[>= -90.0 , <= 90.0 , totalDigits 8 , fractionDigits 6]'",,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,http://purl.obolibrary.org/obo/UO_0000185,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001862,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,latitude specification (ISO 6709),,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/OBI_0001620,,,,Damion Dooley,,,,A decimal latitude measurement in degrees in conformance with the ISO 6709 standard.,,,,,"/^[N+](:<lat>\d(\.\d+)?)$/, $lat
/^S(:<lat>\d(\.\d+)?)$/,  '-' + $lat","/^(\d(\.\d+)?)$/, '+\1'","/^(:<lat>[-S+N])?(:<degree>[1-8]?[0-9](:<decimal>\.\d{1,6})?)$/, $lat$degree.$decimal
/^(:<lat>[-S+N])?(:<degree>90(:<decimal>\.0{1,6})?))$/, $lat$degree.$decimal",
http://www.bioassayontology.org/bao#BAO_0000513,96 well plate,,A microplate having 96 wells.,FALSE,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Microplate,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,BAO_0000513,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,96 well plate,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A microplate having 96 wells.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001485,reference genome accession,reference genome accession,"A data field which describes the persistent, unique identifier of a genome database entry.",FALSE,,,,,,,PCDS:reference_genome_accession,,,,,,,PCDS: Provide the accession number of the reference genome.,,,,,,,,,,,,,,PCDS: NC_045512.2,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,reference genome accession,reference genome accession slot,,,,GENEPIO:0001485,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,reference genome accession,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A data field which describes the persistent, unique identifier of a genome database entry.",,"PCDS: A persistent, unique identifier of a genome database entry.",,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100925,extraction recovery efficiency measurement method,extraction recovery efficiency measurement method,A data field which describes the method by which recovery efficiency of an extraction was calculated.,FALSE,,,,,,,PCDS:extraction_recovery_efficiency_measurement_method,,,,,,,PCDS: Provide a brief description of how extraction recovery efficiency was measured or estimated.,,,,,,,,,,,Drafted 2023-07-27,,,,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,extraction recovery efficiency measurement method,extraction recovery efficiency measurement method slot,,,,GENEPIO:0100925,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,extraction recovery efficiency measurement method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the method by which recovery efficiency of an extraction was calculated.,,PCDS: The method by which recovery efficiency of an extraction was calculated.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100626,trimmed ribosomal gene sequence,,PCDS: Enter the sequence of the trimmed ribosomal gene sequence.,FALSE,,,,,,,PCDS:trimmed_ribosomal_gene_sequence,,,,,,,PCDS: Enter the sequence of the trimmed ribosomal gene sequence.,,,,,,,,,,,,,,PCDS:  ,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100626,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2026-04-13T17:16:47.336Z,,,,,,,,,,,,,,,,,,,trimmed ribosomal gene sequence,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PCDS: The results of a data transformation of sequence data in which read bases are removed to produce a trimmed ribosomal RNA sequence.,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_9005,Phasianidae,,,FALSE,,,,,,,turkeys,,,,,,,,,,,,,,,,,,,Phasianidae,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:9005,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Phasianidae,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000074,obsolete: sequencing assay,,the sequencing conditions and the analyte being measured,TRUE,,,,,,,,,,,,,,,,,,,,,GROUP: IRIDA Ontology (Emma),,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000074,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: sequencing assay,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/OBI_0600047,Derived from Illumina Sample Sheet,,the sequencing conditions and the analyte being measured,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00003347,slightly ripe,,A fruit ripeness characteristic in which a fruit has some ripe part(s) or is about to achieve full maturity.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00003347,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,slightly ripe,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A fruit ripeness characteristic in which a fruit has some ripe part(s) or is about to achieve full maturity.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100736,BOX-A1R-based repetitive extragenic palindromic (BOX) PCR fingerprint tag,BOX-A1R-based repetitive extragenic palindromic (BOX) PCR fingerprint data type|BOX PCR fingerprint tag,A PCR marker detection characterization data tag which indicates the presence of BOX-A1R-based repetitive extragenic palindromic (BOX) PCR fingerprint data.,FALSE,,,,,,,BOX PCR fingerprint,,,,,,,Example Guidance: Use this tag to indicate additional data is available that provides characterization information from BOX PCR fingerprint assay(s).,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,BOX-A1R-based repetitive extragenic palindromic (BOX) PCR fingerprint data type|BOX PCR fingerprint tag,,,,GENEPIO:0100736,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-05-18T19:08:34.869Z,,,,,,,,,,,,,,,,,,,BOX-A1R-based repetitive extragenic palindromic (BOX) PCR fingerprint tag,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A PCR marker detection characterization data tag which indicates the presence of BOX-A1R-based repetitive extragenic palindromic (BOX) PCR fingerprint data.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_87230,nitrofuran antibiotic,,A member of the class of furans in which the furan ring is substituted by a nitro group and which also has significant antibiotic properties.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:87230,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,nitrofuran antibiotic,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A member of the class of furans in which the furan ring is substituted by a nitro group and which also has significant antibiotic properties.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C17600,Adult,"Human, Adult|Adult Human (21+)|Adult|ADULT",An age group comprised of humans who have reached reproductive age.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Human, Adult|Adult Human (21+)|Adult|ADULT",,,,NCIT:C17600,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Adult,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An age group comprised of humans who have reached reproductive age.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490392,metallized polymer container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0392,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490392,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,metallized polymer container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100474,sequence submitted by contact name,sequence_submitted_by_contact_name|sequence submitted by contact name,A data field which describes the name or title of the contact responsible for follow-up regarding the submission of the sequence to a repository or database.,FALSE,,,,,,,PCDS:sequence_submitted_by_contact_name,,,,,,,"PCDS: Provide the name of an individual or their job title. As personnel turnover may render the contact's name obsolete, it is prefereable to provide a job title for ensuring accuracy of information and institutional memory. If the information is unknown or cannot be provided, leave blank or provide a null value.",,,,,,,,,,,Not to be confused with 'sequenced by contact name' http://purl.obolibrary.org/obo/GENEPIO_0100471,,,PCDS: Enterics Lab Manager,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,sequence_submitted_by_contact_name|sequence submitted by contact name,sequence submitted by contact name slot,,,,GENEPIO:0100474,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-12-22T00:55:53.808Z,,,,,,,,,,,,,,,,,,,sequence submitted by contact name,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the name or title of the contact responsible for follow-up regarding the submission of the sequence to a repository or database.,,PCDS: The name or title of the contact responsible for follow-up regarding the submission of the sequence to a repository or database.,,,,,,
http://purl.obolibrary.org/obo/IDO_0100629,livestock,,domestic animal that bears a food production role.,FALSE,,,,,,,,,,,,,,"Livestock refers to one or more domesticated animals raised in an agricultural setting to produce commodities such as food, fiber and labor. The term ""livestock"" as used in this article does not include poultry or farmed fish; however the inclusion of these, especially poultry, within the meaning of ""livestock"" is common. (http://en.wikipedia.org/wiki/Livestock)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,IDO:0100629,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ido/brucellosis.owl,,,,,,,,,livestock,,,,,,,,,,,,,,,,,,,,,,,,,,,,YL,,,,domestic animal that bears a food production role.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C43164,Package Type,Package Type|PACKTYP,"Kinds of packages that bulk drug substances and final drug dosage forms are contained in, including both the immediate (or primary) and secondary containers.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Package Type|PACKTYP,,,,NCIT:C43164,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Package Type,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Kinds of packages that bulk drug substances and final drug dosage forms are contained in, including both the immediate (or primary) and secondary containers.",,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000645,rate,,A ratio in which the numerator represents any quantity and the denominator represents an interval of time.,FALSE,,,,,,,,,,,,,,,,,,,,,COKA/SEVCO Group,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000645,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,rate,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Brian S. Alper, Harold Lehmann, Joanne Dehnbostel, Kenneth Wilkins, Muhammad Afzal",,,,A ratio in which the numerator represents any quantity and the denominator represents an interval of time.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001181,sampling location name country,geographical location country name|geo_loc name (country),A data field which describes the country of origin of the sample.,FALSE,,,,,,,PCDS:geo_loc_name_country,,,,,,,"PCDS: If known, select a value from the pick list.",,,,,,,,,,,,,,PCDS: Canada,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,geographical location country name|geo_loc name (country),sample collection name country,,,,GENEPIO:0001181,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,sampling location name country,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the country of origin of the sample.,,PCDS: The country of origin of the sample.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100149,MGI DNBSEQ-G400RS,,"A DNA sequencer manufactured by the MGI corporation with an outout capacity of 55GB~330GB per run, which enables faster sequencing than the DNBSEQ-G400.",FALSE,,,,,,,DNBSEQ-G400RS FAST,,,,,,,,,,,,,,https://www.completegenomics.com/media/css-00058-system-guide-dnbseq-g400rs-rev-c.pdf|https://global-mgitech.com/seqall/dnbseq-g400/,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100149,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,MGI DNBSEQ-G400RS,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A DNA sequencer manufactured by the MGI corporation with an outout capacity of 55GB~330GB per run, which enables faster sequencing than the DNBSEQ-G400.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00004472,elk roast,,A retail cut of meat from an elk that is of a size for slicing into more than one portion and is suitable for roasting.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00004472,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,elk roast,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A retail cut of meat from an elk that is of a size for slicing into more than one portion and is suitable for roasting.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490177,wood box,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0177,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490177,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,wood box,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/MPATH_0,pathological entity,,Pathological structure or process,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MPATH:0,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mpath.owl,,,,,,,,,pathological entity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Pathological structure or process,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0001508,sampling time measurement datum,,A time measurement datum when an observation is made or a sample is taken from a material as measured from some reference point.,FALSE,,,,,,,time point,,,,,,,,,,,,,,MO_738 timepoint,,,,,sampling time measurement datum,,,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0001508,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,sampling time measurement datum,,,,,,,,,,,,,,,,,,,,,,,,,,,,Person: Chris Stoeckert,,,,A time measurement datum when an observation is made or a sample is taken from a material as measured from some reference point.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001900,set,,A set does not have a direct distance metric between its members.,FALSE,,,,,,,,,,,,,,A set does not have a direct distance metric between its members.,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001900,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,set,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510221,food allergen labelling about nuts and products thereof,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0221,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510221,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food allergen labelling about nuts and products thereof,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03430152,divided into pieces,,"Divided into pieces whose shape bears little or no relation to the shape of the whole. If all dimensions are below 0.2 cm., use *DISINTEGRATED OR GROUND*. Examples are: bread slice, cubed beef, sliced carrot, cut green beans, apple ring, shredded cabbage or cheese.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=E0152,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03430152,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,divided into pieces,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Divided into pieces whose shape bears little or no relation to the shape of the whole. If all dimensions are below 0.2 cm., use *DISINTEGRATED OR GROUND*. Examples are: bread slice, cubed beef, sliced carrot, cut green beans, apple ring, shredded cabbage or cheese.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0000075,subdivision of skeletal system,skeletal system subdivision,Anatomical cluster consisting of the skeletal elements and articular elements that are part of an individual subdivision of the organism.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:ComplexSkeletalStructure|UMLS:C1519343|SCTID:118966000|NCIT:C34076|FMA:85544,,,,,,,,,,,,,,,,,,,,,,,UBERON:0010322,,skeletal system subdivision,,,,UBERON:0000075,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,subdivision of skeletal system,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Anatomical cluster consisting of the skeletal elements and articular elements that are part of an individual subdivision of the organism.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0000071,death stage,,End of the life of an organism.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,XtroDO:0000085|XAO:0000437,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0000071,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,death stage,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,End of the life of an organism.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0000072,proximo-distal subdivision of respiratory tract,,An section of a respiratory tract.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MA:0000434|FMA:45660,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0000072,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,proximo-distal subdivision of respiratory tract,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An section of a respiratory tract.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490192,paperboard container with foil or liner overwrap,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0192,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490192,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,paperboard container with foil or liner overwrap,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510091,no sugars added claim,,"A claim stating that sugars have not been added to a food, and any claim likely to have the same meaning for the consumer, may only be made where the product does not contain any added mono- or disaccharides or any other food used for its sweetening properties. If sugars are naturally present in the food, the following indication should also appear on the label: ""CONTAINS NATURALLY OCCURRING SUGARS"" [REGULATION (EC) No 1924/2006 Corrigendum].

No added sugars and 'without added sugars' are allowed if no sugar or sugar containing ingredient is added during processing. (28 Federal Register 2302, January 6, 1993)",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0091,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510091,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,no sugars added claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A claim stating that sugars have not been added to a food, and any claim likely to have the same meaning for the consumer, may only be made where the product does not contain any added mono- or disaccharides or any other food used for its sweetening properties. If sugars are naturally present in the food, the following indication should also appear on the label: ""CONTAINS NATURALLY OCCURRING SUGARS"" [REGULATION (EC) No 1924/2006 Corrigendum].

No added sugars and 'without added sugars' are allowed if no sugar or sugar containing ingredient is added during processing. (28 Federal Register 2302, January 6, 1993)",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100056,subject age at time of specimen collection bin (70 - 79),,An age group that stratifies the age of a case to be between 70 to 79 years old (inclusive).,FALSE,,,,,,,70 - 79,,,,,,,,,,,,,,,,,,,,,,,,ready for release,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100056,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,subject age at time of specimen collection bin (70 - 79),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An age group that stratifies the age of a case to be between 70 to 79 years old (inclusive).,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510106,artificial ingredient-related claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0106,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510106,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,artificial ingredient-related claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100563,sequence passed quality control datum,,A data item which is a statement confirming that quality control processes were carried out and that the sequence met the assessment criteria.,FALSE,,,,,,,sequence passed quality control,,,,,,,"Example: Use this statement to indicate that quality control processes were carried out and that the sequence met the assessment criteria. Note: quality control here refers to quality of the raw reads, consensus sequence or assembly, not the qaulity of analytical results e.g. lineage assignment.",,,,,,,,,,,,,,,,,ready for release,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100563,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-1107-9135,2023-01-23T00:42:19.315Z,,,,,,,,,,,,,,,,,,,sequence passed quality control datum,,,,,,,,,,,,,,,,,,,,,,The PHA4GE QC Contextual Data Tags Specification: https://github.com/pha4ge/contextual-data-qc-tags,,,,,,,,,,A data item which is a statement confirming that quality control processes were carried out and that the sequence met the assessment criteria.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_26822,sulfide,,Any sulfur molecular entity that involves either covalently bonded or anionic sulfur.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:26822,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,sulfide,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any sulfur molecular entity that involves either covalently bonded or anionic sulfur.,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_7770007,disease by developmental or physiological process,,"A grouping class for human diseases classified by the molecular, biochemical, cellular, anatomic, developmental or physiological process that is disrupted.",FALSE,,,,,,,,,,,,,,This term is intended solely for classification purposes and should not be used for direct data annotation.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MONDO:7770007,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,,,,,,,,,disease by developmental or physiological process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A grouping class for human diseases classified by the molecular, biochemical, cellular, anatomic, developmental or physiological process that is disrupted.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001849,discharged from hospital,,"Damion Dooley note: This term (weakly) implies that the patient is recovered enough to be released from hospital. Technically this isn't a health status though, it is a patient medical service state.",FALSE,,,,,,,,,,,,,,"Damion Dooley note: This term (weakly) implies that the patient is recovered enough to be released from hospital. Technically this isn't a health status though, it is a patient medical service state.",,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001849,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,discharged from hospital,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_24432,biological role,,A role played by the molecular entity or part thereof within a biological context.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:24432,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,biological role,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A role played by the molecular entity or part thereof within a biological context.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020694,piece of poultry,,A severed part of a poultry.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020694,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of poultry,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A severed part of a poultry.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_33674,s-block molecular entity,,An s-block molecular entity is a molecular entity containing one or more atoms of an s-block element.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:33674,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,s-block molecular entity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An s-block molecular entity is a molecular entity containing one or more atoms of an s-block element.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001033,obsolete: potluck,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001033,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: potluck,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/PCO_0000037,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_11574,streptococcal meningitis,,A bacterial meningitis that has_material_basis_in streptococcal bacteria.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:11574,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,streptococcal meningitis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A bacterial meningitis that has_material_basis_in streptococcal bacteria.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_11573,listeriosis,,"A primary bacterial infectious disease that results_in infection, has_material_basis_in Listeria monocytogenes, which is transmitted_by ingestion of contaminated food or raw milk or transmitted_by congenital method. Ingestion of Listeria by pregnant women has_symptom nausea, has_symptom vomiting, has_symptom diarrhea, has_symptom fever, has_symptom malaise, has_symptom back pain, and has_symptom headache. Maternal infection with Listeria can result in chorioamnionitis, premature labor, spontaneous abortion, or stillbirth.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:11573,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,listeriosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A primary bacterial infectious disease that results_in infection, has_material_basis_in Listeria monocytogenes, which is transmitted_by ingestion of contaminated food or raw milk or transmitted_by congenital method. Ingestion of Listeria by pregnant women has_symptom nausea, has_symptom vomiting, has_symptom diarrhea, has_symptom fever, has_symptom malaise, has_symptom back pain, and has_symptom headache. Maternal infection with Listeria can result in chorioamnionitis, premature labor, spontaneous abortion, or stillbirth.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_11572,Listeria meningitis,,A bacterial meningitis that has_material_basis_in Listeria monocytogenes infection.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:11572,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,Listeria meningitis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A bacterial meningitis that has_material_basis_in Listeria monocytogenes infection.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C35708,Stone,Stone|Calculus|Calculi|CALCULUS,"Accumulated material from the secretions of an organ. It is solid and representative examples include gallbladder stones, kidney stones, and salivary gland stones.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Stone|Calculus|Calculi|CALCULUS,,,,NCIT:C35708,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Stone,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Accumulated material from the secretions of an organ. It is solid and representative examples include gallbladder stones, kidney stones, and salivary gland stones.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510213,food allergen labelling,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0213,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510213,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food allergen labelling,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470166,drying by infrared heat radiation,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0166,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470166,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,drying by infrared heat radiation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0101116,genetic target name,,PCDS: Provide the full name of the gene used in the test. Standardized gene names can be found in the Gene Ontology using this look-up service: https://bit.ly/2Sq1LbI,FALSE,,,,,,,PCDS:genetic_target_name,,,,,,,PCDS: Provide the full name of the gene used in the test. Standardized gene names can be found in the Gene Ontology using this look-up service: https://bit.ly/2Sq1LbI,,,,,,,,,,,,,,PCDS: gyrase A,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0101116,,,,,,,,,,,,,,2026-04-13T17:18:02.461Z,,,,,,,,,,,,,,,,,,,genetic target name,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PCDS: The name of the genetic marker used for testing.,,,,,,
http://purl.obolibrary.org/obo/HP_0001289,Confusion,Mental disorientation|Easily confused|Disorientation|Confusion,"Lack of clarity and coherence of thought, perception, understanding, or action.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0009676|SNOMEDCT_US:286933003,,,,,,,,,,,,,,,,,,,,,,,HP:0000731,,Mental disorientation|Easily confused|Disorientation|Confusion,,,,HP:0001289,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Confusion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Lack of clarity and coherence of thought, perception, understanding, or action.",,,,,,,,
http://purl.obolibrary.org/obo/HP_0001287,Meningitis,,Inflammation of the meninges.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0025289|SNOMEDCT_US:7180009,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0001287,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Meningitis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Inflammation of the meninges.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00003987,Gibraltar,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00003987,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Gibraltar,http://purl.obolibrary.org/obo/GAZ_00002949,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00003981,British Overseas Territory,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00003981,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,British Overseas Territory,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00003988,Montserrat,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00003988,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Montserrat,http://purl.obolibrary.org/obo/GAZ_00003949,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00003985,British Indian Ocean Territory,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00003985,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,British Indian Ocean Territory,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00003986,Cayman Islands,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,INSDC:country:cayman islands,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00003986,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Cayman Islands,http://purl.obolibrary.org/obo/GAZ_00003772,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02010212,"piece of light animal meat (with skin, raw)",,A raw piece of light animal meat that contains skin.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02010212,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"piece of light animal meat (with skin, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw piece of light animal meat that contains skin.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000074,beef shoulder steak (raw),,A raw beef shoulder steak.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000074,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef shoulder steak (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef shoulder steak.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00002011,fresh water,freshwater,"Water which has a low concentration of dissolved solutes, particularly that of sodium chloride.",FALSE,,,,,,,,,,,,,,"The lower bound of solute concentration required for water to be considered freshwater is variable, but is always less than that of seawater, and often cited as less than 1 gram of solutes per 1 litre of water.",,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Fresh_water|SWEETRealm:FreshWater|LTER:216|EcoLexicon:fresh_water,,,,,,,,,,,,,,,,,,,,,,,,,freshwater,,,,ENVO:00002011,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,envoPolar|envoEmpo,,,,,,,,fresh water,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Water which has a low concentration of dissolved solutes, particularly that of sodium chloride.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03480036,"packed in gravy or sauce, meat",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=K0036,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03480036,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"packed in gravy or sauce, meat",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100445,food product properties,food_product|food product,"A data field which describes any characteristic of the food product pertaining to its state, processing, a label claim, or implications for consumers.",FALSE,,,,,,,PCDS:food_product_properties,,,,,,,"PCDS: Provide any characteristics of the food product including whether it has been cooked, processed, preserved, any known information about its state, any known information about its containment, and any information about a label claim.",,,,,,,,,,,,,,PCDS: Food (chopped) [FOODON:00002777],,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,food_product|food product,food product slot,,,,GENEPIO:0100445,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,food product properties,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A data field which describes any characteristic of the food product pertaining to its state, processing, a label claim, or implications for consumers.",,"PCDS: Any characteristic of the food product pertaining to its state, processing, or implications for consumers.",,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100948,passive sampling device,,"A composite sampler that passively collects target material from an environment without active pumping or manual collection, relying on natural processes such as diffusion, adsorption, or flow to accumulate analytes over time.",FALSE,,,,,,,trap sampler|passive sampler,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100948,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-11-20T16:24:25Z,,,,,,,,,,,,,,,,,,,passive sampling device,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A composite sampler that passively collects target material from an environment without active pumping or manual collection, relying on natural processes such as diffusion, adsorption, or flow to accumulate analytes over time.",,,,,,,,
http://purl.obolibrary.org/obo/APOLLO_SV_00000258,delay from symptoms to treatment,,The duration between the appearance of symptoms of a disease and the start of a treatment.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,APOLLO_SV:00000258,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/apollo_sv.owl,,,,,,,,,delay from symptoms to treatment,,,,,,,,,,,,,,,,,,,,,,,,,,,,Mathias Brochhausen,,,,The duration between the appearance of symptoms of a disease and the start of a treatment.,,,,,,,,
http://purl.obolibrary.org/obo/OBA_2001007,age of onset of hyperlipidemia,age hyperlipidemia symptoms begin|age at onset of hyperlipidemia,The age at which hyperlipidemia manifestations first appear.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,age hyperlipidemia symptoms begin|age at onset of hyperlipidemia,,,,OBA:2001007,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age of onset of hyperlipidemia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The age at which hyperlipidemia manifestations first appear.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000155,draft WGS lab assembly quality metrics record,,A data specification which records the assembly quality datum of a draft whole genome sequencing product.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000155,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,draft WGS lab assembly quality metrics record,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A data specification which records the assembly quality datum of a draft whole genome sequencing product.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C165131,Study Country Code,StudyCountry.countryCode|Study Country Code,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,StudyCountry.countryCode|Study Country Code,,,,NCIT:C165131,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Study Country Code,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03500039,food-grade paper product surface,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=N0039,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03500039,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food-grade paper product surface,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000203,beef rib,,A beef cut that is situated under the front section of the backbone and used primarily for support.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000203,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef rib,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A beef cut that is situated under the front section of the backbone and used primarily for support.,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0041656,ST-elevation myocardial infarction,acute-ST segment elevation myocardial infarction|STEMI|ST segment elevation myocardial infarction,A very serious type of heart attack during which one of the heart’s major arteries (one of the arteries that supplies oxygen and nutrient-rich blood to the heart muscle) is blocked. ST-segment elevation is an abnormality detected on the 12-lead ECG.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SCTID:401303003|MESH:D000072657,,,,,,,,,,,,,,,,,,,,,,,,,acute-ST segment elevation myocardial infarction|STEMI|ST segment elevation myocardial infarction,,,,MONDO:0041656,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,,,,,,,,,ST-elevation myocardial infarction,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A very serious type of heart attack during which one of the heart’s major arteries (one of the arteries that supplies oxygen and nutrient-rich blood to the heart muscle) is blocked. ST-segment elevation is an abnormality detected on the 12-lead ECG.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100259,police officer role,,A role inhering in a person that is realized when the bearer is a warranted law employee of a police force.,FALSE,,,,,,,Police Officer,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Police_officer,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100259,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,police officer role,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A role inhering in a person that is realized when the bearer is a warranted law employee of a police force.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03309012,tuna fillet (raw),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://bioregistry.io/reference/siren:F9012,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03309012,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,tuna fillet (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0307,Italian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0307,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Italian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0309,Sardinian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0309,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Sardinian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001893,generic range history record,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001893,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,generic range history record,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C3149,Kidney Disorder,"Renal Disorder, NOS|Renal Disorder|Renal Disease|Kidney disease|Kidney Disorder|Kidney Disease","A neoplastic or non-neoplastic condition affecting the kidney. Representative examples of non-neoplastic conditions include glomerulonephritis and nephrotic syndrome. Representative examples of neoplastic conditions include benign processes (e.g., renal lipoma and renal fibroma) and malignant processes (e.g., renal cell carcinoma and renal lymphoma).",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Renal Disorder, NOS|Renal Disorder|Renal Disease|Kidney disease|Kidney Disorder|Kidney Disease",,,,NCIT:C3149,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Kidney Disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A neoplastic or non-neoplastic condition affecting the kidney. Representative examples of non-neoplastic conditions include glomerulonephritis and nephrotic syndrome. Representative examples of neoplastic conditions include benign processes (e.g., renal lipoma and renal fibroma) and malignant processes (e.g., renal cell carcinoma and renal lymphoma).",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001642,curator organization name,,"The curator organization name is the name of an organization that manages a given repository of entities (samples, isolates, sequences ...)",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001642,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,curator organization name,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"The curator organization name is the name of an organization that manages a given repository of entities (samples, isolates, sequences ...)",,,help:This should be populated with a selection from INSDC.org controlled vocabulary for providers: ftp://ftp.ncbi.nlm.nih.gov/pub/taxonomy/coll_dump.txt,,,,,
http://purl.obolibrary.org/obo/STATO_0000039,statistic,,a statistic is a measurement datum to describe a dataset or a variable. It is generated by a calculation on set of observed data.,FALSE,,,,,,,,,,,,,,,,,,,,,"STATO, adapted from wikipedia (http://en.wikipedia.org/wiki/Statistic).",,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000039,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,statistic,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra|Alejandra Gonzalez-Beltran|Orlaith Burke,,,,a statistic is a measurement datum to describe a dataset or a variable. It is generated by a calculation on set of observed data.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C51953,Microbial Colony Count,Microbial Colony Count,A microbiology test that determines the amount of viable microbial cells under specific conditions.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Microbial Colony Count,,,,NCIT:C51953,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Microbial Colony Count,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A microbiology test that determines the amount of viable microbial cells under specific conditions.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001533,food specimen specification,,"A food specimen type is a categorization of a food specimen, by the organism it is or came from, or by a class of food products.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001533,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,food specimen specification,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"A food specimen type is a categorization of a food specimen, by the organism it is or came from, or by a class of food products.",,,"order:
FOODON:03411564 # food source
FOODON:00002381 # food product by organism
FOODON:03311737 # processed food product
NCIT:C71898 # brand name",,,,,
http://purl.obolibrary.org/obo/OBI_0001942,grant agency,,An organization that provides funding support for projects such as investigations.,FALSE,,,,,,,funding organization,,,,,,,,,,,,,,NIAID GSCID-BRC metadata working group,,,,,grant agency,,,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0001942,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,grant agency,,,,,,,,,,,,,,,,,,,,,,"'funding organization'
http://vivoweb.org/ontology/core#FundingOrganization",,,,,,"PERSON: Jie Zheng, Chris Stoeckert",,,,An organization that provides funding support for projects such as investigations.,,,,,,,,
http://purl.obolibrary.org/obo/OMRSE_00000013,physician role,,"A health care role borne by a human being and realized by promoting, maintaining or restoring human health through the study, diagnosis, and treatment of disease, injury and other physical and mental impairments.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OMRSE:00000013,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,physician role,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A health care role borne by a human being and realized by promoting, maintaining or restoring human health through the study, diagnosis, and treatment of disease, injury and other physical and mental impairments.",,,,,,,,
http://purl.obolibrary.org/obo/OMRSE_00000010,health care role,healthcare role,"A role in human social processes that is realized by health care processes such as seeking or providing treatment for disease and injury, diagnosing disease and injury, or undergoing diagnosis.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,healthcare role,,,,OMRSE:00000010,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/omrse.owl,,,,,,,,,health care role,,,,,,,,,,,,,,,,,,,,,,,,,,,,William R. Hogan|Mathias Brochhausen,,,,"A role in human social processes that is realized by health care processes such as seeking or providing treatment for disease and injury, diagnosing disease and injury, or undergoing diagnosis.",,,,,,,,
http://purl.obolibrary.org/obo/OMRSE_00000011,patient role,,A health care role borne by an organism and that is realized by presenting to a health care provider in a clinical encounter.,FALSE,,,,,,,patient,,,,,,,"In order to avoid the presumption of the formal structures and institutions of Western civilization, bearing a patient role does not entail that the organism presents at an official place of business, with an organization formally and legally registered with various gov't entities, with a person endowed by the gov't with certain certifications.",,,,,,,CAFE domain expert working group.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OMRSE:00000011,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/omrse.owl,,,,,,,,,patient role,,,,,,,,,,,,,,,,,,,,,,,,,,,,Mathias Brochhausen|Amanda Hicks,,,,A health care role borne by an organism and that is realized by presenting to a health care provider in a clinical encounter.,,,,,,,,
http://purl.obolibrary.org/obo/OMRSE_00000014,nurse role,,"A health care role borne by a human being and realized by the care of individuals, families, and communities so they may attain, maintain, or recover optimal health and quality of life.",FALSE,,,,,,,nurse,,,,,,,,,,,,,,based on: http://en.wikipedia.org/wiki/Nursing,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OMRSE:00000014,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/omrse.owl,,,,,,,,,nurse role,,,,,,,,,,,,,,,,,,,,,,,,,,,,Mathias Brochhausen,,,,"A health care role borne by a human being and realized by the care of individuals, families, and communities so they may attain, maintain, or recover optimal health and quality of life.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001901,ordered set,,"This data type is for items that have a unique order or rank with respect to each other in a set BUT NO meaningful DISTANCE metric exists between items aside from their position in the full set.  ""Favorite soft drinks"" or ""Favorite colours"" or ""Closest friends"" are examples.  

Letters of the alphabet cannot be interpreted as ordinal with respect to their use in words, since no uniform rules exist about their placement in words.  But they can be ordinal insofar as they are stated in a particular order in listing off the alphabet.

A distance metric becomes possible if the items have units, e.g. 5cm or 10degrees celcius.  The set's elements can then be mapped to one dimension.",FALSE,,,,,,,,,,,,,,"This data type is for items that have a unique order or rank with respect to each other in a set BUT NO meaningful DISTANCE metric exists between items aside from their position in the full set.  ""Favorite soft drinks"" or ""Favorite colours"" or ""Closest friends"" are examples.  

Letters of the alphabet cannot be interpreted as ordinal with respect to their use in words, since no uniform rules exist about their placement in words.  But they can be ordinal insofar as they are stated in a particular order in listing off the alphabet.

A distance metric becomes possible if the items have units, e.g. 5cm or 10degrees celcius.  The set's elements can then be mapped to one dimension.",,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001901,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ordered set,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001731,human clinical specimen,,,FALSE,,,,,,,patient sample,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001731,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,human clinical specimen,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HP_0033400,Acute abdomen,Acute abdominal pain,"A sudden onset of abdominal pain with associated nausea or vomiting. The acute abdomen may be caused by an infection, inflammation, vascular occlusion, or obstruction.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Acute abdominal pain,,,,HP:0033400,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Acute abdomen,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A sudden onset of abdominal pain with associated nausea or vomiting. The acute abdomen may be caused by an infection, inflammation, vascular occlusion, or obstruction.",,,,,,,,
http://purl.obolibrary.org/obo/HP_0033401,Tissue ischemia,,"Ischemia is defined as a restriction of arterial blood supply to a tissue associated with insufficient oxygenation to support the metabolis requirements of the tissue. Depending on the involved tissues, clinical manifestations may include pain, pallor, lack of pulse, coldness, paresthesia, and paralysis. Additional associated manifestations include hemodynamic parameters (reduced blood pressure distal to the site of restricted arterial supply) and angiographic evidence of arterial occclusion.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0033401,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Tissue ischemia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Ischemia is defined as a restriction of arterial blood supply to a tissue associated with insufficient oxygenation to support the metabolis requirements of the tissue. Depending on the involved tissues, clinical manifestations may include pain, pallor, lack of pulse, coldness, paresthesia, and paralysis. Additional associated manifestations include hemodynamic parameters (reduced blood pressure distal to the site of restricted arterial supply) and angiographic evidence of arterial occclusion.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02010165,piece of animal breast (raw),,A raw piece of an animal breast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02010165,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of animal breast (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw piece of an animal breast.,,,,,,,,
http://purl.obolibrary.org/obo/PATO_0002367,castrated male,,Male quality of being incapable to reproduce because of functional loss of the testicles from surgical removal or chemical means.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PATO:0002367,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/pato.owl,http://purl.oboInOwllibrary.org/oboInOwl/pato#value_slim,,,,,,,,castrated male,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Male quality of being incapable to reproduce because of functional loss of the testicles from surgical removal or chemical means.,,,,,,,,
http://purl.obolibrary.org/obo/PATO_0002366,intact male,,"Male quality of having complete, unaltered reproductive organs.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PATO:0002366,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/pato.owl,http://purl.oboInOwllibrary.org/oboInOwl/pato#value_slim,,,,,,,,intact male,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Male quality of having complete, unaltered reproductive organs.",,,,,,,,
http://purl.obolibrary.org/obo/PATO_0002365,intact female,,"Female quality of having complete, unaltered reproductive organs",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PATO:0002365,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/pato.owl,http://purl.oboInOwllibrary.org/oboInOwl/pato#value_slim,,,,,,,,intact female,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Female quality of having complete, unaltered reproductive organs",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000006,beef bottom round steak (boneless),,A boneless beef bottom round steak.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000006,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef bottom round steak (boneless),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A boneless beef bottom round steak.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001810,restricted access,,A categorical choice recorded when the data for a given measurable datum is available but not shared publicly because of information privacy concerns.,FALSE,,,,,,,,,,,,,,,,,,,,,https://ena-docs.readthedocs.io/en/latest/submit/samples/missing-values.html,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000120,http://purl.obolibrary.org/obo/GENEPIO_0001666,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001810,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,restricted access,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,INSDC term (lower level),,A categorical choice recorded when the data for a given measurable datum is available but not shared publicly because of information privacy concerns.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100740,molecular quantification data tag,molecular quantification data type|molecular quantification attribute bundle,A dataset attribute bundle which indicates the presence of molecular quantification data.,FALSE,,,,,,,molecular quantification,,,,,,,Example Guidance: Use this tag to indicate additional data is available that provides quantification information from molecular properties.,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,molecular quantification data type|molecular quantification attribute bundle,,,,GENEPIO:0100740,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-05-18T19:08:34.869Z,,,,,,,,,,,,,,,,,,,molecular quantification data tag,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A dataset attribute bundle which indicates the presence of molecular quantification data.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100205,community health centre exposure process,,A process occuring within or in the vicinity of a community health centre that exposes the recipient organism to a material entity.,FALSE,,,,,,,Community Health Centre,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100205,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,community health centre exposure process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A process occuring within or in the vicinity of a community health centre that exposes the recipient organism to a material entity.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020464,piece of turkey meat (raw),,A raw piece of turkey meat.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020464,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of turkey meat (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw piece of turkey meat.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00004028,"populated place, Burundi",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00004028,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Burundi",http://purl.obolibrary.org/obo/GAZ_00001090,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00004026,Province (Burundi),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00004026,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Province (Burundi),http://purl.obolibrary.org/obo/GAZ_00001090,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470172,food storage with refrigerating agent process,,The process of food storage involving an accompanying refrigerating agent.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0172,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470172,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food storage with refrigerating agent process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The process of food storage involving an accompanying refrigerating agent.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02010030,"piece of animal (with skin, raw)",,A piece of animal that contains the skin and is raw.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02010030,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"piece of animal (with skin, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A piece of animal that contains the skin and is raw.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_24531,heterocyclic antibiotic,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:24531,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,heterocyclic antibiotic,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100878,alkalinity measurement value,alkalinity measurement value,An environmental data field which describes the numerical value of a measurement of alkalinity.,FALSE,,,,,,,PCDS:alkalinity_measurement_value,,,,,,,PCDS: Provide the numerical value of the measured alkalinity.,,,,,,,,,,,,,,PCDS: 3,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,alkalinity measurement value,alkalinity measurement value slot,,,,GENEPIO:0100878,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,alkalinity measurement value,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the numerical value of a measurement of alkalinity.,,PCDS: The numerical value of a measurement of alkalinity.,,,,,,
http://purl.obolibrary.org/obo/GAZ_00007370,"populated place, Costa Rica",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00007370,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Costa Rica",http://purl.obolibrary.org/obo/GAZ_00002901,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_59477,Rhinolophus affinis,,,FALSE,,,,,,,intermediate horseshoe bat,,,,,,,,,,,,,,,,,,,Rhinolophus affinis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:59477,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Rhinolophus affinis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0101086,nucleic acid storage duration unit,,PCDS: Provide the units from the pick list.,FALSE,,,,,,,PCDS:nucleic_acid_storage_duration_unit,,,,,,,PCDS: Provide the units from the pick list.,,,,,,,,,,,,,,PCDS: Year [UO:0000036],,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0101086,,,,,,,,,,,,,,2026-04-13T17:18:02.461Z,,,,,,,,,,,,,,,,,,,nucleic acid storage duration unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PCDS: The units of a measured extracted nucleic acid storage duration.,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510260,bodybuilder as food consumer,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0260,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510260,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,bodybuilder as food consumer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001683,draft subject demographic specification,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001683,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,draft subject demographic specification,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000445,bison round,,"A bison cut that comes from the 'round', the rear leg of the bison.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000445,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,bison round,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A bison cut that comes from the 'round', the rear leg of the bison.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000147,beef top sirloin butt,,A beef cut that is located behind the beef short loin on the top back end of the animal.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000147,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef top sirloin butt,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A beef cut that is located behind the beef short loin on the top back end of the animal.,,,,,,,,
http://purl.obolibrary.org/obo/PCO_0000037,potluck,,"A human social gathering at which each participant is expected to bring food to share. A potluck also can be party, a social meal, or some other type of social gathering.",FALSE,,,,,,,,,,,,,,,,,,,,,GenEpio curators,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PCO:0000037,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/pco.owl,,,,,,,,,potluck,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A human social gathering at which each participant is expected to bring food to share. A potluck also can be party, a social meal, or some other type of social gathering.",,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_9922,Capra,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,Capra,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:9922,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Capra,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_9923,Capra aegagrus,,,FALSE,,,,,,,wild goat|bezoar ibex,,,,,,,,,,,,,,,,,,,Capra aegagrus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:9923,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Capra aegagrus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_9925,Capra hircus,,,FALSE,,,,,,,goats|goat|domestic goat,,,,,,,,,,,,,,,,,,,Capra hircus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:9925,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Capra hircus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100035,scraping,,A specimen collection process in which a sample is collected by scraping a surface with a sterile sampling device.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100035,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,scraping,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A specimen collection process in which a sample is collected by scraping a surface with a sterile sampling device.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470112,drying under reduced pressure,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0112,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470112,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,drying under reduced pressure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020862,bison primal cut (raw),,A raw bison primal cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020862,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,bison primal cut (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw bison primal cut.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530156,cut of poultry meat,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0156,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530156,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,cut of poultry meat,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HP_0001324,Muscle weakness,Muscular weakness|Muscle weakness,Reduced strength of muscles.,FALSE,,,,,,,,,,,,,,"It is important clinical to distinguish between muscle weakness, fatigue, and asthenia. Fatigue describes the inability to continue performing a task after multiple repetitions; in contrast, a patient with primary weakness is unable to perform the first repetition of the task. Asthenia is a sense of weariness or exhaustion in the absence of muscle weakness. Conditions that result in intrinsic muscle weakness can be divided into several main categories: infectious, neurologic, endocrine, inflammatory, rheumatologic, genetic, metabolic, electrolyte-induced, or drug-induced.",,,,,,,,,,,,,,,,,,UMLS:C0151786|SNOMEDCT_US:26544005,,,,,,,,,,,,,,,,,,,,,,,HP:0009061|HP:0009012|HP:0008979|HP:0002309,,Muscular weakness|Muscle weakness,,,,HP:0001324,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Muscle weakness,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Reduced strength of muscles.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_5098,flucloxacillin,,"A penicillin compound having a 6β-[3-(2-chloro-6-fluorophenyl)-5-methyl-1,2-oxazole-4-carboxamido] side-chain.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:5098,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,flucloxacillin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A penicillin compound having a 6β-[3-(2-chloro-6-fluorophenyl)-5-methyl-1,2-oxazole-4-carboxamido] side-chain.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510133,"\""more\""label claim",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0133,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510133,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"""more""label claim",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100521,AMR agent name,antimicrobial_agent_name|antimicrobial agent name,"A data field which describes the name of the agent that kills or slows the growth of microorganisms, including bacteria, viruses, fungi and protozoans.",FALSE,,,,,,,PCDS:amr_agent_name,,,,,,,"PCDS: The names of the drug have already been matched with measurement, breakpoint, and phenotype fields in the template. No need to add these unless the drug of interest is not present. Use the Term Request System to request the addition of other agents.",,,,,,,,,,,,,,PCDS: Amoxicillin-clavulanic [ARO:3003997],,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,antimicrobial_agent_name|antimicrobial agent name,antimicrobial agent name slot,,,,GENEPIO:0100521,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,AMR agent name,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A data field which describes the name of the agent that kills or slows the growth of microorganisms, including bacteria, viruses, fungi and protozoans.",,"PCDS: The name of the agent that kills or slows the growth of microorganisms, including bacteria, viruses, fungi and protozoans.",,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100589,GRDI AMR One Health specification,Genomics Research & Development Initiative Antimicrobial Resistance One Health specification,A data specification established for use by The Canadian Genomics Research & Development Initiative (GRDI) Antimicrobial Resistance (AMR) project for contextual data (metadata) harmonization and curation across data providers.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,Genomics Research & Development Initiative Antimicrobial Resistance One Health specification,,,,GENEPIO:0100589,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788,2022-12-09T20:18:38.91Z,,,,,,,,,,,,,,,,,,,GRDI AMR One Health specification,,,,,,,,,,,,,,,,,,,,,,https://github.com/cidgoh/GRDI_AMR_One_Health,,,,,,,,,,A data specification established for use by The Canadian Genomics Research & Development Initiative (GRDI) Antimicrobial Resistance (AMR) project for contextual data (metadata) harmonization and curation across data providers.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03480031,packed in nitrogen,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=K0031,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03480031,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,packed in nitrogen,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000227,beef rib steak (raw),,A raw beef rib steak.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000227,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef rib steak (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef rib steak.,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_39442,Mus musculus musculus,,,FALSE,,,,,,,eastern European house mouse,,,,,,,,,,,,,,,,,,,Mus musculus musculus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:39442,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Mus musculus musculus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon#_taxonomic_rank,obsolete taxonomic rank,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete taxonomic rank,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:_taxonomic_rank,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,obsolete taxonomic rank,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000032,bay,,An area of water bordered by land on three sides.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,TGN:21127|TGN:21123|TGN:21121|SWEETRealm:Bay|Geonames:H.BGHT|Geonames:H.BAYS|Geonames:H.BAY|FTT:235|FTT:232|FTT:190|EcoLexicon:bay,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00000032,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,bay,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An area of water bordered by land on three sides.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020843,piece of bison,,A severed part of a bison.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020843,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of bison,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A severed part of a bison.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000024,"beef top round roast (boneless, raw)",,A raw and boneless beef top round roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000024,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"beef top round roast (boneless, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw and boneless beef top round roast.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001987,MeDIP-Seq strategy,,Methylated DNA Immunoprecipitation Sequencing strategy.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI SRA: MeDIP-Seq,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001987,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MeDIP-Seq strategy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Methylated DNA Immunoprecipitation Sequencing strategy.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00005247,Province (Pakistan),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00005247,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Province (Pakistan),http://purl.obolibrary.org/obo/GAZ_00005246,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03305578,mahi mahi fillet (raw),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://bioregistry.io/reference/siren:F5578,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03305578,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,mahi mahi fillet (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002119,vacuuming for specimen collection,,The removal or collection of specimen material through the use of suction.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002119,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,vacuuming for specimen collection,,,,,,,,,,,,,,,,,,,,,,,,,,,,Emma Griffiths,,,,The removal or collection of specimen material through the use of suction.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_33302,pnictogen molecular entity,,A p-block molecular entity containing any pnictogen.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:33302,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,pnictogen molecular entity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A p-block molecular entity containing any pnictogen.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100765,sample collection time of day,,A data field which details the descriptive time of day during which the sample was collected.,FALSE,,,,,,,PCDS:sample_collection_time_of_day,,,,,,,"PCDS: If known, select a value from the pick list. The time of sample processing matters especially for grab samples, as fecal concentration in wastewater fluctuates over the course of the day.",,,,,,,,,,,,,,PCDS: Morning,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100765,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-21T01:14:47.111Z,,,,,,,,,,,,,,,,,,,sample collection time of day,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which details the descriptive time of day during which the sample was collected.,,PCDS: The descriptive time of day during which the sample was collected.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100974,Applied Biosystems sequencing instrument model,,A sequencing instrument model that is manufactured by Applied Biosystems and which performs Sanger sequencing and fragment analysis by capillary electrophoresis.,FALSE,,,,,,,,,,,,,,,,,,,,,https://www.thermofisher.com/ca/en/home/life-science/sequencing/sanger-sequencing/sanger-sequencing-technology-accessories.html,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100974,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2023-11-28T18:23:15.862Z,,,,,,,,,,,,,,,,,,,Applied Biosystems sequencing instrument model,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A sequencing instrument model that is manufactured by Applied Biosystems and which performs Sanger sequencing and fragment analysis by capillary electrophoresis.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03480019,packed in sweetened brine,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=K0019,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03480019,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,packed in sweetened brine,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HP_0003110,Abnormality of urine homeostasis,Urine issues|Pee issues,An abnormality of the composition of urine or the levels of its components.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4025655,,,,,,,,,,,,,,,,,,,,,,,HP:0011866|HP:0011865,,Urine issues|Pee issues,,,,HP:0003110,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormality of urine homeostasis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An abnormality of the composition of urine or the levels of its components.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0003111,Abnormal blood ion concentration,Electrolyte disturbance|Electrolyte disorders|Abnormality of ion homeostasis,Abnormality of the homeostasis (concentration) of a monoatomic ion.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4025654|UMLS:C1704431|SNOMEDCT_US:237840007,,,,,,,,,,,,,,,,,,,,,,,HP:0003253,,Electrolyte disturbance|Electrolyte disorders|Abnormality of ion homeostasis,,,,HP:0003111,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal blood ion concentration,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Abnormality of the homeostasis (concentration) of a monoatomic ion.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510100,no artificial flavors claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0100,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510100,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,no artificial flavors claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020173,piece of chicken (skinless),,A piece of chicken that is skinless.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020173,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of chicken (skinless),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A piece of chicken that is skinless.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_553473,ceftizoxime,,"A parenteral third-generation cephalosporin, bearing a 2-(2-amino-1,3-thiazol-4-yl)-2-(methoxyimino)acetyl]amino group at the 7β-position.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:3511|CHEBI:112105,,,,,,CHEBI:553473,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,ceftizoxime,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A parenteral third-generation cephalosporin, bearing a 2-(2-amino-1,3-thiazol-4-yl)-2-(methoxyimino)acetyl]amino group at the 7β-position.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0007592,ciliated columnar epithelium,,"Simple columnar epithelium in which the luminal side of the cells bears cilia. Examples: epithelium of trachea, epithelium of uterine tube.[FMA].",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:64798,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0007592,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,ciliated columnar epithelium,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Simple columnar epithelium in which the luminal side of the cells bears cilia. Examples: epithelium of trachea, epithelium of uterine tube.[FMA].",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470175,food blanching,,"Blanching is a cooking process wherein a food, usually a vegetable or fruit, is scalded in boiling water, removed after a brief, timed interval, and finally plunged into iced water or placed under cold running water (shocking or refreshing) to halt the cooking process. Blanching foods helps reduce quality loss over time. People often use blanching as a pre-treatment prior to freezing, drying, or canning—heating vegetables or fruits to inactivate enzymes, modify texture, remove the peel, and wilt tissue. Blanching is also utilized to preserve color, flavor, and nutritional value. The process has three stages: preheating, blanching, and cooling. The most common blanching methods for vegetables/fruits are hot water and steam, while cooling is either done using cold water or cool air.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0175,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470175,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food blanching,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Blanching is a cooking process wherein a food, usually a vegetable or fruit, is scalded in boiling water, removed after a brief, timed interval, and finally plunged into iced water or placed under cold running water (shocking or refreshing) to halt the cooking process. Blanching foods helps reduce quality loss over time. People often use blanching as a pre-treatment prior to freezing, drying, or canning—heating vegetables or fruits to inactivate enzymes, modify texture, remove the peel, and wilt tissue. Blanching is also utilized to preserve color, flavor, and nutritional value. The process has three stages: preheating, blanching, and cooling. The most common blanching methods for vegetables/fruits are hot water and steam, while cooling is either done using cold water or cool air.",,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000409,likelihood ratio,,the likelihood ratio is a ratio which is formed by dividing the post-test odds with the pre-test odds in the context of a Bayesian formulation,FALSE,,,,,,,,,,,,,,,,,,,,,"",,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000409,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,likelihood ratio,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra,,,,the likelihood ratio is a ratio which is formed by dividing the post-test odds with the pre-test odds in the context of a Bayesian formulation,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000092,read coverage,,Coverage (read depth or depth) is the average number of reads representing a given nucleotide in the reconstructed sequence.,FALSE,,,,,,,,,,,,,,"Damion Dooley's note: Wikipedia defines calculation with: ""the length of the original genome (G), the number of reads(N), and the average read length(L) as N * L/G""",,,,,,,URI: http://en.wikipedia.org/wiki/Shotgun_sequencing,,,,,,,30,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000092,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,,,,,,,read coverage,,,,,Assembly QC,,,,,,,,,,,,,,,,,,,,,,Coverage,,,"from within ""Finishing strategy"" in GROUP: MIxS",,Coverage (read depth or depth) is the average number of reads representing a given nucleotide in the reconstructed sequence.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100100,fully vaccinated,,A vaccination status in which an individual has completed a full series of an authorized vaccine according to the regional health institutional guidance.,FALSE,,,,,,,,,,,,,,PHA4GE Definition: A category used for indicating that a variant of the Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) containing genetic mutations demonstrated to increase binding affinity to human cells and linked to rapid spread in human populations is under surveillance.,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100100,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,fully vaccinated,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A vaccination status in which an individual has completed a full series of an authorized vaccine according to the regional health institutional guidance.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510037,reduced salt or sodium claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0037,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510037,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,reduced salt or sodium claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HP_0001903,Anemia,Low number of red blood cells or hemoglobin|Low number of red blood cells or haemoglobin|Anaemia,A reduction in erythrocytes volume or hemoglobin concentration.,FALSE,,,,,,,,,,,,,,"Anemia is not a specific entity but can result from many underlying pathologic processes. The three main causes of anemia are blood loss, decreased or faulty red blood cell production, and increased destruction of red blood cells. Various classifications are in clinical use including a classification according to the mean corpuscular volume (MCV) of the erythrocytes: microcytic, macrocytic, or normocytic. Anemias can also be classified according to variations in cell size and shape, as reflected by the red-cell distribution width (RDW). Additionally, anemias can be classified into those of inadequate production and hemolytic anemias.",,,,,,,,,,,,,,,,,,UMLS:C0162119|UMLS:C0002871|SNOMEDCT_US:271737000|SNOMEDCT_US:165397008,,,,,,,,,,,,,,,,,,,,,,,HP:0005509|HP:0003136|HP:0001926,,Low number of red blood cells or hemoglobin|Low number of red blood cells or haemoglobin|Anaemia,,,,HP:0001903,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Anemia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A reduction in erythrocytes volume or hemoglobin concentration.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000043,beef eye of round steak,,A steak cut from the beef eye of round.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000043,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef eye of round steak,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A steak cut from the beef eye of round.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00004135,"populated place, mainland Portugal",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00004135,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, mainland Portugal",http://purl.obolibrary.org/obo/GAZ_00004126,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C168498,Neonatal Complication,Neonatal Complications|Neonatal Complication,A difficulty or problem that occurs at or just after delivery of an infant that can jeopardize the health of the infant.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Neonatal Complications|Neonatal Complication,,,,NCIT:C168498,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Neonatal Complication,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A difficulty or problem that occurs at or just after delivery of an infant that can jeopardize the health of the infant.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_61689,amino cyclitol,,Any cyclitol having one or more alcoholic hydroxy groups replaced by substituted or unsubstituted amino groups.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:61689,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,amino cyclitol,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any cyclitol having one or more alcoholic hydroxy groups replaced by substituted or unsubstituted amino groups.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102150,MGI DNBSEQ-T1+,,An MGI DNBSEQ instrument model which utilises dual flow cell sequencing to produce single and paired end reads between 50 -300bp.,FALSE,,,,,,,DNBSEQ-T1+,,,,,,,,,,,,,,https://www.completegenomics.com/products/sequencing-platforms/dnbseq-t1-plus|https://en.mgitech.cn/Home/Products/instruments_info/id/73.html,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102150,,,,,,,,,,,,,https://orcid.org/0000-0002-7654-6902|https://orcid.org/0000-0001-8008-8249,2025-03-21T01:14:47.111Z,,,,,,,,,,,,,,,,,,,MGI DNBSEQ-T1+,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An MGI DNBSEQ instrument model which utilises dual flow cell sequencing to produce single and paired end reads between 50 -300bp.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0001888,sequencing facility contact person,,A person who is the contact representative at the sequencing facility|A person who is the contact representative at the sequencing facility,FALSE,,,,,,,,,,,,,,,,,,,,,NIAID GSCID-BRC metadata working group,,,,,sequencing facility contact person,,,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0001888,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/obi.owl,,,,,,,,,sequencing facility contact person,,,,,,,Sequencing Facility Contact Name,,,,,,,,,,,,,,,,,,,,,"PERSON: Chris Stoeckert, Jie Zheng",,,,A person who is the contact representative at the sequencing facility|A person who is the contact representative at the sequencing facility,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038857,inferior inguinal lymph node,subinguinal lymph node|inferior inguinal node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:44302,,,,,,,,,,,,,,,,,,,,,,,,,subinguinal lymph node|inferior inguinal node,,,,UBERON:0038857,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,inferior inguinal lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038854,deep popliteal lymph node,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:44232,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0038854,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,deep popliteal lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038853,superficial popliteal lymph node,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:44231,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0038853,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,superficial popliteal lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038859,intermediate deep inguinal lymph node,nodus lymphoideus inguinales profundi intermedius|nodus inguinales profundi intermedius|middle inguinal node|intermediate inguinal lymph node|intermediate deep inguinal node|cloquet's node|cloquet's gland,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:44304,,,,,,,,,,,,,,,,,,,,,,,,,nodus lymphoideus inguinales profundi intermedius|nodus inguinales profundi intermedius|middle inguinal node|intermediate inguinal lymph node|intermediate deep inguinal node|cloquet's node|cloquet's gland,,,,UBERON:0038859,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,intermediate deep inguinal lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038856,superior lateral inguinal lymph node,superolateral node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:44301,,,,,,,,,,,,,,,,,,,,,,,,,superolateral node,,,,UBERON:0038856,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,superior lateral inguinal lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038855,superior medial inguinal lymph node,superomedial node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:44297,,,,,,,,,,,,,,,,,,,,,,,,,superomedial node,,,,UBERON:0038855,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,superior medial inguinal lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530217,tenderloin,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0217,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530217,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,tenderloin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001941,5-methylcytidine antibody method,,Selection of methylated DNA fragments using an antibody raised against 5-methylcytosine or 5-methylcytidine (m5C).,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI SRA: 5-methylcytidine antibody,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001941,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,5-methylcytidine antibody method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Selection of methylated DNA fragments using an antibody raised against 5-methylcytosine or 5-methylcytidine (m5C).,,,,,,,,
http://purl.obolibrary.org/obo/IDO_0000514,susceptible population,,An organism population whose members are not infected with an infectious agent and who lack immunity to the infectious agent.,FALSE,,,,,,,at-risk population,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,IDO:0000514,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ido.owl,,,,,,,,,susceptible population,,,,,,,,,,,,,,,,,,,,,,,,,,,,Lindsay Cowell|Alexander Diehl|Albert Goldfain,,,,An organism population whose members are not infected with an infectious agent and who lack immunity to the infectious agent.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0018707,bladder organ,bladder,A membranous sac in animals that serves as the receptacle of a liquid or contains gas.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,BTO:0000123,,,,,,,,,,,,,,,,,,,,,,,,,,bladder,,,UBERON:0018707,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,bladder organ,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A membranous sac in animals that serves as the receptacle of a liquid or contains gas.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_38032,carbotricyclic compound,,A carbopolyclic compound comprising of three carbocyclic rings.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:38032,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,carbotricyclic compound,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A carbopolyclic compound comprising of three carbocyclic rings.,,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000251,continuous variable,,"A continuous variable is one for which, within the limits the variable ranges, any value is possible.",FALSE,,,,,,,,,,,,,,,,,,,,,http://udel.edu/~mcdonald/statvartypes.html|http://davidmlane.com/hyperstat/A97418.html,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000251,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,continuous variable,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra|Alejandra Gonzalez-Beltran|Orlaith Burke,,,,"A continuous variable is one for which, within the limits the variable ranges, any value is possible.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C82508,Life Threatening,SLIFE|Life Threatening,A situation that imperils the existence of an entity.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SLIFE|Life Threatening,,,,NCIT:C82508,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Life Threatening,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A situation that imperils the existence of an entity.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03311007,pork shoulder (raw),,A raw pork shoulder.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://bioregistry.io/reference/siren:F11007,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03311007,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pork shoulder (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw pork shoulder.,,,,,,,,
http://purl.obolibrary.org/obo/FLU_0000976,symptom onset date,,A symptom onset date is a date-time entity that marks the start of one or more reported symptoms pertaining to an episode of human or animal illness,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FLU:0000976,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,symptom onset date,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A symptom onset date is a date-time entity that marks the start of one or more reported symptoms pertaining to an episode of human or animal illness,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_73539,naphthyridine derivative,,Any organonitrogen heterocyclic compound that is a derivative of a naphthyridine.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:73539,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,naphthyridine derivative,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any organonitrogen heterocyclic compound that is a derivative of a naphthyridine.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_46633,carbapenems,,"The class of β-lactam antibiotics that whose members have a carbapenem skeleton which is variously substituted at positions 3, 4, and 6.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:46633,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,carbapenems,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The class of β-lactam antibiotics that whose members have a carbapenem skeleton which is variously substituted at positions 3, 4, and 6.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038943,superior diaphragmatic lymph node,superior diaphragmatic node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:66167,,,,,,,,,,,,,,,,,,,,,,,,,superior diaphragmatic node,,,,UBERON:0038943,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,superior diaphragmatic lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0005109,HIV infectious disease,Human immunodeficiency virus infectious disease|Human immunodeficiency virus disease or disorder|Human immunodeficiency virus caused disease or disorder|HIV infection,An infection caused by the human immunodeficiency virus.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0019693|SCTID:86406008|NCIT:C3108|NANDO:2200810|MESH:D015658|MEDGEN:5583|ICD9:042-042|ICD9:042|ICD10CM:B20-B20|EFO:0000764|DOID:526,,,,,,,,,,,,,,,,,,,,,,,,,Human immunodeficiency virus infectious disease|Human immunodeficiency virus disease or disorder|Human immunodeficiency virus caused disease or disorder|HIV infection,,,,MONDO:0005109,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,HIV infectious disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An infection caused by the human immunodeficiency virus.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510070,no fat added claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0070,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510070,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,no fat added claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100270,father role,,A role inhering in a person that is realized when the bearer is the male parent of a child.,FALSE,,,,,,,Father of case,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Father,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100270,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,father role,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A role inhering in a person that is realized when the bearer is the male parent of a child.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510061,sugars special claim,,"All narrower term definitions extracted from 58 Federal Register 2302, January 6, 1993, part 101.60(c).",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0061,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510061,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,sugars special claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"All narrower term definitions extracted from 58 Federal Register 2302, January 6, 1993, part 101.60(c).",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100786,oxygen reduction potential (ORP) measurement unit,oxygen reduction potential (ORP) measurement unit,An environmental data field which describes the units of a measurement of oxygen reduction potential (ORP).,FALSE,,,,,,,PCDS:oxygen_reduction_potential_orp_measurement_unit,,,,,,,PCDS: Provide the units of the measured oxygen reduction potential by selecting a value from the pick list.,,,,,,,,,,,,,,PCDS: milliVolt (mV),,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,oxygen reduction potential (ORP) measurement unit,oxygen reduction potential (ORP) measurement unit slot,,,,GENEPIO:0100786,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,oxygen reduction potential (ORP) measurement unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the units of a measurement of oxygen reduction potential (ORP).,,PCDS: The units of a measurement of oxygen reduction potential (ORP).,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000270,leg of lamb center cut,,A leg of lamb that has the shank and sirloin removed leaving only the “center” section of the leg thus the name “center cut.”,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000270,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,leg of lamb center cut,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A leg of lamb that has the shank and sirloin removed leaving only the “center” section of the leg thus the name “center cut.”,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_3479,cefadroxil,,"A cephalosporin bearing methyl and  (2<i>R</i>)-2-amino-2-(4-hydroxyphenyl)acetamido groups at positions 3 and 7, respectively, of the cephem skeleton.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:3479,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,cefadroxil,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A cephalosporin bearing methyl and  (2<i>R</i>)-2-amino-2-(4-hydroxyphenyl)acetamido groups at positions 3 and 7, respectively, of the cephem skeleton.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_3478,cefaclor,,"A cephalosporin bearing chloro and (<i>R</i>)-2-amino-2-phenylacetamido groups at positions 3 and 7, respectively, of the cephem skeleton.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:472656,,,,,,CHEBI:3478,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,cefaclor,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A cephalosporin bearing chloro and (<i>R</i>)-2-amino-2-phenylacetamido groups at positions 3 and 7, respectively, of the cephem skeleton.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000334,pork sirloin tip roast,,A pork roast that is derived from the leg tip.The Sirloin Tip also known as the Knuckle is the muscle group that runs parallel with the (Femur) Leg bone that extends upward from the (Patella) Kneecap to the Ball of the Femur.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000334,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pork sirloin tip roast,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A pork roast that is derived from the leg tip.The Sirloin Tip also known as the Knuckle is the muscle group that runs parallel with the (Femur) Leg bone that extends upward from the (Patella) Kneecap to the Ball of the Femur.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000618,lotic water body,,"A lotic water body is a water body in which the accumulated water, in its totality, is flowing.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01000618,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,lotic water body,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A lotic water body is a water body in which the accumulated water, in its totality, is flowing.",,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0741,Lahu in China (SGDP),Lahu,A population made up of 2 samples from Lahu individuals recruited in China as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Lahu,,,,HANCESTRO:0741,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Lahu in China (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Lahu individuals recruited in China as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0747,Tu in China (SGDP),Tu,A population made up of 2 samples from Tu individuals recruited in China as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Tu,,,,HANCESTRO:0747,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Tu in China (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Tu individuals recruited in China as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0746,Thai in Thailand (SGDP),Thai,A population made up of 2 samples from Thai individuals recruited in Thailand as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Thai,,,,HANCESTRO:0746,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Thai in Thailand (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Thai individuals recruited in Thailand as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0742,Miao in China (SGDP),Miao,A population made up of 2 samples from Miao individuals recruited in China as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Miao,,,,HANCESTRO:0742,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Miao in China (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Miao individuals recruited in China as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0743,Naxi in China (SGDP),Naxi,A population made up of 3 samples from Naxi individuals recruited in China as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Naxi,,,,HANCESTRO:0743,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Naxi in China (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 3 samples from Naxi individuals recruited in China as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0745,She in China (SGDP),She,A population made up of 2 samples from She individuals recruited in China as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,She,,,,HANCESTRO:0745,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,She in China (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from She individuals recruited in China as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0748,Tujia in China (SGDP),Tujia,A population made up of 2 samples from Tujia individuals recruited in China as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Tujia,,,,HANCESTRO:0748,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Tujia in China (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Tujia individuals recruited in China as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0740,Korean in Korea (SGDP),Korean,A population made up of 2 samples from Korean individuals recruited in Korea as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Korean,,,,HANCESTRO:0740,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Korean in Korea (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Korean individuals recruited in Korea as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0744,Oroqen in China (SGDP),Oroqen,A population made up of 2 samples from Oroqen individuals recruited in China as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Oroqen,,,,HANCESTRO:0744,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Oroqen in China (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Oroqen individuals recruited in China as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0749,Uygur in China (SGDP),Uygur,A population made up of 2 samples from Uygur individuals recruited in China as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Uygur,,,,HANCESTRO:0749,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Uygur in China (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Uygur individuals recruited in China as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C89811,Territory,Territory,A geographical area under the jurisdiction of a sovereign state and marked off for administrative or other purposes.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,Territory,,,,NCIT:C89811,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Territory,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A geographical area under the jurisdiction of a sovereign state and marked off for administrative or other purposes.,,,lookup:http://purl.obolibrary.org/obo/GAZ_00000448,,,,,
http://purl.obolibrary.org/obo/UO_1000027,degree Celsius based unit,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:1000027,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,degree Celsius based unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490211,"wrapper, material unspecified",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0211,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490211,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"wrapper, material unspecified",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HP_0001952,Glucose intolerance,Abnormal glucose tolerance,Glucose intolerance (GI) can be defined as dysglycemia that comprises both prediabetes and diabetes. It includes the conditions of impaired fasting glucose (IFG) and impaired glucose tolerance (IGT) and diabetes mellitus (DM).,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0235401,,,,,,,,,,,,,,,,,,,,,,,HP:0000833,Abnormal glucose tolerance,Glucose intolerance,,,,HP:0001952,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Glucose intolerance,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Glucose intolerance (GI) can be defined as dysglycemia that comprises both prediabetes and diabetes. It includes the conditions of impaired fasting glucose (IFG) and impaired glucose tolerance (IGT) and diabetes mellitus (DM).,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C156660,Genitourinary System Disorder,Urogenital Disease|Genitourinary System Disorder|Genitourinary Disorder,A non-neoplastic or neoplastic disorder that affects the genitourinary system.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Urogenital Disease|Genitourinary System Disorder|Genitourinary Disorder,,,,NCIT:C156660,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Genitourinary System Disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A non-neoplastic or neoplastic disorder that affects the genitourinary system.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_04000000,Province (Vanuatu),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:04000000,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Province (Vanuatu),http://purl.obolibrary.org/obo/GAZ_00006918,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000114,subject age - unit,,Age unit of the age measurement of a subject (individual organism).,FALSE,,,,,,,,,,,,,,,,,,,,,NIAID GSCID-BRC metadata working group,,,,"Damion Dooley Feb 20, 2017: GSCID-BRC calls for an explicit field here whereas NCBI Biosample and MIxS don't.",,,"day, week, month, year",,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000114,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,subject age - unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,Age unit of the age measurement of a subject (individual organism).,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020980,beef chop (raw),,A raw beef chop.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020980,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef chop (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef chop.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490116,ceramic or earthenware container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0116,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490116,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,ceramic or earthenware container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001145,genbank ena ddbj accession,GenBank_accession|GenBank accession,An identifier field which describes the GenBank/ENA/DDBJ identifier assigned to the sequence in the International Nucleotide Sequence Database Collaboration (INSDC) archives.,FALSE,,,,,,,PCDS:genbank_ena_ddbj_accession,,,,,,,PCDS: Store the accession returned from a GenBank/ENA/DDBJ submission.,,,,,,,,,,,,,,PCDS: MN908947.3,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,National Genetic Sequence Data Base accession|INSDC_accession|INSDC accession|GenBank_ENA_DDBJ_accession|GenBank/ENA/DDBJ accession,GenBank_accession|GenBank accession,,,GENEPIO:0001145,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,genbank ena ddbj accession,,,,,,,,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/genbank/,,,,,,,,,https://github.com/cidgoh/pathogen-genomics-package/issues/36,An identifier field which describes the GenBank/ENA/DDBJ identifier assigned to the sequence in the International Nucleotide Sequence Database Collaboration (INSDC) archives.,,PCDS: The GenBank identifier assigned to the sequence in the INSDC archives.,,,,,,
http://purl.obolibrary.org/obo/DOID_9801,tuberculous peritonitis,,"A gastrointestinal tuberculosis that results_in inflammation located_in peritoneum, which results in formation of tubercles. The infection has_symptom abdominal discomfort, has_symptom pain, has_symptom distention from gas or fluid, has_symptom digestive disturbances and has_symptom emaciation.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:9801,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,tuberculous peritonitis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A gastrointestinal tuberculosis that results_in inflammation located_in peritoneum, which results in formation of tubercles. The infection has_symptom abdominal discomfort, has_symptom pain, has_symptom distention from gas or fluid, has_symptom digestive disturbances and has_symptom emaciation.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03500038,food-grade ceramic surface,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=N0038,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03500038,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food-grade ceramic surface,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/IDO_0000615,colony,,An organism population persisting in a site it has colonized.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,IDO:0000615,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ido.owl,,,,,,,,,colony,,,,,,,,,,,,,,,,,,,,,,,,,,,,Lindsay Cowell|Alexander Diehl|Albert Goldfain,,,,An organism population persisting in a site it has colonized.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001015,obsolete: hot tub,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001015,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: hot tub,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ENVO_01000938,,,,,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000055,chromosome coordinate system,,chromosome coordinate system is a genomic coordinate which uses chromosome of a particular assembly build process to define start and end positions. This coordinate system is unstable and will change with each new genome sequence assembly build.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000125,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000055,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,chromosome coordinate system,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra|Alejandra Gonzalez-Beltran|Orlaith Burke,,,,chromosome coordinate system is a genomic coordinate which uses chromosome of a particular assembly build process to define start and end positions. This coordinate system is unstable and will change with each new genome sequence assembly build.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0002217,synovial joint,diarthrosis joint|diarthrosis|diarthroses|articulatio synoviale,"Joint in which the articulating bones or cartilages are connected by an articular capsule which encloses a synovial membrane and a synovial cavity. Examples: Temporomandibular joint, knee joint.[FMA].",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:SynovialJoint|ZFA:0005153|Wikipedia:Synovial_joint|TAO:0005153|SCTID:113234001|NCIT:C32461|MA:0000322|FMA:7501|EHDAA2:0003183|CALOHA:TS-2138|AEO:0000183,,,,,,,,,,,,,,,,,,,,,,,,,diarthrosis joint|diarthrosis|diarthroses|articulatio synoviale,,,,UBERON:0002217,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,synovial joint,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Joint in which the articulating bones or cartilages are connected by an articular capsule which encloses a synovial membrane and a synovial cavity. Examples: Temporomandibular joint, knee joint.[FMA].",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0004912,biliary bud,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,VHOG:0001351|EMAPA_RETIRED:16565|EMAPA:16561|EHDAA2:0000171,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0004912,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,biliary bud,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100792,carbonaceous biochemical oxygen demand (CBOD) measurement unit,carbonaceous biochemical oxygen demand (CBOD) measurement unit,An environmental data field which describes the units of a measurement of carbonaceous biochemical oxygen demand (CBOD).,FALSE,,,,,,,PCDS:carbonaceous_biochemical_oxygen_demand_cbod_measurement_unit,,,,,,,PCDS: Provide the name of the procedure or technology used to measure CBOD.,,,,,,,,,,,,,,PCDS: CBOD measurement by optical probe,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,carbonaceous biochemical oxygen demand (CBOD) measurement unit,carbonaceous biochemical oxygen demand (CBOD) measurement unit slot,,,,GENEPIO:0100792,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,carbonaceous biochemical oxygen demand (CBOD) measurement unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the units of a measurement of carbonaceous biochemical oxygen demand (CBOD).,,PCDS: The method used to measure carbonaceous biochemical oxygen demand (CBOD).,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002059,obsolete: Becton Dickinson,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002059,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: Becton Dickinson,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ARO_3004405,,,,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0044347,erythrocyte disorder,red blood cell disorder|red blood cell disease|erythrocyte disease or disorder|erythrocyte disease|disorder of erythrocyte|disease or disorder of erythrocyte|disease of erythrocyte,A disease or disorder that involves the erythrocyte.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0221016|SCTID:38292009|MEDGEN:526127|ICD9:289.9,,,,,,,,,,,,,,,,,,,,,,,,,red blood cell disorder|red blood cell disease|erythrocyte disease or disorder|erythrocyte disease|disorder of erythrocyte|disease or disorder of erythrocyte|disease of erythrocyte,,,,MONDO:0044347,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,erythrocyte disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A disease or disorder that involves the erythrocyte.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_26069,phosphonic acids,,HP(=O)(OH)<small><sub>2</sub></small>  (phosphonic acid) and its P-substituted derivatives.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:26069,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,phosphonic acids,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP(=O)(OH)<small><sub>2</sub></small>  (phosphonic acid) and its P-substituted derivatives.,,,,,,,,
http://purl.obolibrary.org/obo/ARO_3004366,Clinical and Laboratory Standards Institute (CLSI),National Committee on Clinical Laboratory Standards (NCCLS)|NCCLS|National Committee for Clinical Laboratory Standards (NCCLS),The Clinical and Laboratory Standards Institute develops and implements clinical laboratory testing standards.,FALSE,,,,,,,,,,,,,,"On January 1, 2005 the National Committee on Clinical Laboratory Standards (NCCLS) changed its name to CLSI",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CLSI,,National Committee on Clinical Laboratory Standards (NCCLS)|NCCLS|National Committee for Clinical Laboratory Standards (NCCLS),,,,ARO:3004366,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/aro.owl,,,,,,,,,Clinical and Laboratory Standards Institute (CLSI),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The Clinical and Laboratory Standards Institute develops and implements clinical laboratory testing standards.,,,,,,,,
http://purl.obolibrary.org/obo/BTO_0000578,hepatoma cell line,,"Hepatoma is a cancer originating in the liver, in liver cells. More often called hepatocarcinoma or hepatocellular carcinoma.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,BTO:0000578,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/bto.owl,,,,,,,,,hepatoma cell line,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Hepatoma is a cancer originating in the liver, in liver cells. More often called hepatocarcinoma or hepatocellular carcinoma.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000370,veal shoulder arm,,A veal meat cut in which shoulder arm consists of the muscle groups that extend from the elbow joint to the shoulder joint and includes the first three ribs.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000370,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,veal shoulder arm,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A veal meat cut in which shoulder arm consists of the muscle groups that extend from the elbow joint to the shoulder joint and includes the first three ribs.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100123,Illumina NovaSeq 6000,,"A DNA sequencer which is manufactured by the Illumina corporation, with two flow cells and an output of up to 6000 Gb (32-40 B reads per run). The sequencer utilizes synthesis technology and patterned flow cells to optimize throughput and even spacing of sequencing clusters.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100123,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,Illumina NovaSeq 6000,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A DNA sequencer which is manufactured by the Illumina corporation, with two flow cells and an output of up to 6000 Gb (32-40 B reads per run). The sequencer utilizes synthesis technology and patterned flow cells to optimize throughput and even spacing of sequencing clusters.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_16541,protein polypeptide chain,,A naturally occurring polypeptide synthesized at the ribosome.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:8526,,,,,,CHEBI:16541,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,protein polypeptide chain,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A naturally occurring polypeptide synthesized at the ribosome.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0012614,Abnormal urine cytology,,An anomalous finding in the examination of the urine for cells.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0587955|SNOMEDCT_US:310439007,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0012614,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal urine cytology,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An anomalous finding in the examination of the urine for cells.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510259,athlete as food consumer,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0259,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510259,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,athlete as food consumer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002139,raw sequence data processing datum,,"The procedures used to remove adapters from raw sequence reads, trim low quality bases and where applicable, merge paired-end reads.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002139,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,raw sequence data processing datum,,,,,,,,,,,,,,,,,,,,,,,,,,,,Emma Griffiths,,,,"The procedures used to remove adapters from raw sequence reads, trim low quality bases and where applicable, merge paired-end reads.",,,"order:
GENEPIO:0000084 # read adapter trimming (y/n)
GENEPIO:0002096 # read adapter trimming software
GENEPIO:0002095 # read paired-end merging software
GENEPIO:0000150 # read trimming and filtering software",,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100715,microbiological identification data tag,microbiological identification data type|microbiological characterization attribute bundle,A microbiological characterization data tag which indicates the presence of microbiological identification data.,FALSE,,,,,,,microbiological identification,,,,,,,Example Guidance: Use this tag to indicate additional data is available that provides identification information from microbiological properties.,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,microbiological identification data type|microbiological characterization attribute bundle,,,,GENEPIO:0100715,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-05-18T19:08:34.869Z,,,,,,,,,,,,,,,,,,,microbiological identification data tag,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A microbiological characterization data tag which indicates the presence of microbiological identification data.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530204,semidomestic or semiwild food production,,"An agricultural production process involving wild plants, insects or other organisms that are tended and protected.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0204,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530204,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,semidomestic or semiwild food production,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An agricultural production process involving wild plants, insects or other organisms that are tended and protected.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_9880,cardiovascular syphilis,,"A tertiary syphilis that is manifested as aneurysm formation in the ascending aorta, caused by chronic inflammatory destruction of the vasa vasorum, insufficiency of the aortic valve, or narrowing of the coronary arteries.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:9880,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,cardiovascular syphilis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A tertiary syphilis that is manifested as aneurysm formation in the ascending aorta, caused by chronic inflammatory destruction of the vasa vasorum, insufficiency of the aortic valve, or narrowing of the coronary arteries.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490299,aluminum combined with regenerated cellulose,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0299,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490299,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,aluminum combined with regenerated cellulose,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_35850,sulfone,,An organosulfur compound having the structure RS(=O)<small><sub>2</sub></small>R (R ≠ H).,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:35850,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,sulfone,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An organosulfur compound having the structure RS(=O)<small><sub>2</sub></small>R (R ≠ H).,,,,,,,,
http://purl.obolibrary.org/obo/DOID_3978,extrinsic cardiomyopathy,,A cardiomyopathy that is characterized by the pathology occurring outside of the myocardium.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:3978,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,extrinsic cardiomyopathy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A cardiomyopathy that is characterized by the pathology occurring outside of the myocardium.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_78616,carbohydrates and carbohydrate derivatives,,"Any organooxygen compound that is a polyhydroxy-aldehyde or -ketone, or a compound derived from one. Carbohydrates contain only carbon, hydrogen and oxygen and usually have an empirical formula C<small><sub><em>m</em></sub></small>(H<small><sub>2</sub></small>O)<small><sub><em>n</em></sub></small>; carbohydrate derivatives may contain other elements by substitution or condensation.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:78616,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,carbohydrates and carbohydrate derivatives,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Any organooxygen compound that is a polyhydroxy-aldehyde or -ketone, or a compound derived from one. Carbohydrates contain only carbon, hydrogen and oxygen and usually have an empirical formula C<small><sub><em>m</em></sub></small>(H<small><sub>2</sub></small>O)<small><sub><em>n</em></sub></small>; carbohydrate derivatives may contain other elements by substitution or condensation.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000143,beef tenderloin steak,,A boneless steak cut from the tenderloin.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000143,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef tenderloin steak,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A boneless steak cut from the tenderloin.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100698,water temperature,water_temperature|water temperature,A data field which describes the temperature of some water.,FALSE,,,,,,,PCDS:water_temperature,,,,,,,PCDS: Provide the numerical value for the temperature of the water (without units).,,,,,,,,,,,,,,PCDS: 4,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,water_temperature|water temperature,water temperature slot,,,,GENEPIO:0100698,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-1107-9135,2023-05-18T05:09:29.167Z,,,,,,,,,,,,,,,,,,,water temperature,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the temperature of some water.,,PCDS: The temperature of some water.,,,,,,
http://purl.obolibrary.org/obo/HP_0004420,Arterial thrombosis,Blood clot in artery,The formation of a blood clot inside an artery.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0151942|SNOMEDCT_US:65198009,,,,,,,,,,,,,,,,,,,,,,,,,Blood clot in artery,,,,HP:0004420,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Arterial thrombosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The formation of a blood clot inside an artery.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03311091,lamb chop (raw),,A raw lamb chop.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://bioregistry.io/reference/siren:F11091,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03311091,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lamb chop (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw lamb chop.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001020,obsolete: grocery store,,A grocery store is a retail store that primarily sells food.,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001020,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: grocery store,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,http://purl.obolibrary.org/obo/ENVO_01000984,,,A grocery store is a retail store that primarily sells food.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_24129,furans,,Compounds containing at least one furan ring.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:24129,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,furans,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Compounds containing at least one furan ring.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C16731,Newborn,Newborn|Neonate|Neonatal|NEONATE,An age group comprised of infants during the first month after birth.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Newborn|Neonate|Neonatal|NEONATE,,,,NCIT:C16731,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Newborn,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An age group comprised of infants during the first month after birth.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0031246,Nonproductive cough,Dry coughing|Dry cough,A cough that does not produce phlegm or mucus.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Dry coughing|Dry cough,,,,HP:0031246,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Nonproductive cough,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A cough that does not produce phlegm or mucus.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0031249,Parageusia,Metallic taste in mouth|Metallic taste|Dysgeusia|Altered sense of taste,"A distortion of the sense of taste, often characterized by the sensation of a metallic taste.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Metallic taste in mouth|Metallic taste|Dysgeusia|Altered sense of taste,,,,HP:0031249,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Parageusia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A distortion of the sense of taste, often characterized by the sensation of a metallic taste.",,,,,,,,
http://purl.obolibrary.org/obo/HP_0031245,Productive cough,Wet cough|Cough with mucus production,A cough that produces phlegm or mucus.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wet cough|Cough with mucus production,,,,HP:0031245,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Productive cough,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A cough that produces phlegm or mucus.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000070,beef shoulder clod (raw),,A raw beef shoulder clod.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000070,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef shoulder clod (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef shoulder clod.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000305,pork sirloin roast (raw),,A raw pork sirloin roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000305,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pork sirloin roast (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw pork sirloin roast.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000355,veal rib (raw),,A raw veal rib.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000355,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,veal rib (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw veal rib.,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0002977,autoimmune disorder of the nervous system,"neurologic autoimmune diseases|neurologic autoimmune disease|nervous system immune disorders|nervous system immune diseases|nervous system hypersensitivity reaction type II disease|nervous system autoimmune diseases|nervous system autoimmune disease|immune disorders, nervous system|immune diseases, nervous system|diseases, neurologic autoimmune|disease, neurologic autoimmune|autoimmune nervous system disorder|autoimmune nervous system diseases|autoimmune disorders, nervous system|autoimmune disorders of the nervous system|autoimmune diseases, neurologic|autoimmune diseases, nervous system|autoimmune disease, neurologic|autoimmune disease of nervous system","A disorder characterized by the degeneration of the nervous system due to autoimmunity. Representative examples include multiple sclerosis, Guillain-Barre syndrome, and myasthenia gravis.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0751871|NCIT:C99383|MESH:D020274|MEDGEN:155946|DOID:438,,,,,,,,,,,,,,,,,,,,,,,,,"neurologic autoimmune diseases|neurologic autoimmune disease|nervous system immune disorders|nervous system immune diseases|nervous system hypersensitivity reaction type II disease|nervous system autoimmune diseases|nervous system autoimmune disease|immune disorders, nervous system|immune diseases, nervous system|diseases, neurologic autoimmune|disease, neurologic autoimmune|autoimmune nervous system disorder|autoimmune nervous system diseases|autoimmune disorders, nervous system|autoimmune disorders of the nervous system|autoimmune diseases, neurologic|autoimmune diseases, nervous system|autoimmune disease, neurologic|autoimmune disease of nervous system",,,,MONDO:0002977,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,autoimmune disorder of the nervous system,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A disorder characterized by the degeneration of the nervous system due to autoimmunity. Representative examples include multiple sclerosis, Guillain-Barre syndrome, and myasthenia gravis.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510011,food fish as consumer,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0011,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510011,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food fish as consumer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0101205,proximal environmental site,,"PCDS: Provide a descriptor of the environmental site close to the sampling site. Use the picklist provided in the template. If not applicable, choose a null value.",FALSE,,,,,,,PCDS:proximal_environmental_site,,,,,,,"PCDS: Provide a descriptor of the environmental site close to the sampling site. Use the picklist provided in the template. If not applicable, choose a null value.",,,,,,,,,,,,,,PCDS: Farm,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0101205,,,,,,,,,,,,,,2026-04-13T17:18:02.461Z,,,,,,,,,,,,,,,,,,,proximal environmental site,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"PCDS: An environmental location in the natural or built environment, that is proximal to a sampling location and which can impact a sample.",,,,,,
http://purl.obolibrary.org/obo/FOODON_02000120,beef T-bone steak (raw),,A raw beef T-bone steak.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000120,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef T-bone steak (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef T-bone steak.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001628,de-novo assembly,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001628,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,de-novo assembly,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0007914,bone of craniocervical region,head or neck bone,A bone that is part of a craniocervical region.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MA:0000569|EMAPA:37245,,,,,,,,,,,,,,,,,,,,,,,,,head or neck bone,,,,UBERON:0007914,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,bone of craniocervical region,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A bone that is part of a craniocervical region.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100619,isolate storage location,,PCDS: Enter the freezer storage location of the isolate as the 'freezer number-shelf number-box number-unit number'.,FALSE,,,,,,,PCDS:isolate_storage_location,,,,,,,PCDS: Enter the freezer storage location of the isolate as the 'freezer number-shelf number-box number-unit number'.,,,,,,,,,,,,,,PCDS: FR1-R3-B1-S01,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100619,,,,,,,,,,,,,,2026-04-13T17:16:47.336Z,,,,,,,,,,,,,,,,,,,isolate storage location,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"PCDS: An isolate datum specifying the location of where an isolate is stored e.g. in a particular freezer, on a particular shelf",,,,,,
http://purl.obolibrary.org/obo/GAZ_00003204,Province (Costa Rica),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00003204,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Province (Costa Rica),http://purl.obolibrary.org/obo/GAZ_00002901,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00003209,Puntarenas Province,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00003209,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Puntarenas Province,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00003201,Special Adminstrative Region (China),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00003201,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Special Adminstrative Region (China),http://purl.obolibrary.org/obo/GAZ_00002845,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00003203,Hong Kong,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,INSDC:country:hong kong,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00003203,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Hong Kong,http://purl.obolibrary.org/obo/GAZ_00008989,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00003202,Macau,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,INSDC:country:macau,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00003202,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Macau,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_52898,azamacrocycle,,A cyclic macromolecule containing one or more nitrogen atoms in place of carbon either as the divalent group NH for the group CH2 or a single trivalent nitrogen atom for the group CH.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:52898,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,azamacrocycle,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A cyclic macromolecule containing one or more nitrogen atoms in place of carbon either as the divalent group NH for the group CH2 or a single trivalent nitrogen atom for the group CH.,,,,,,,,
http://www.ebi.ac.uk/efo/EFO_0021785,age at initiation of cannabis use,age at initiation of cannabis consumption,Age of initiation of the consumption of the drug cannabis.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,age at initiation of cannabis consumption,,,,efo:EFO_0021785,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age at initiation of cannabis use,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Age of initiation of the consumption of the drug cannabis.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100590,Canadian Monkeypox specification,,A data specification established for Monkeypox pathogen genomics contextual data (metadata) harmonization and curation across Canadian data providers.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100590,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788,2022-12-09T20:18:38.91Z,,,,,,,,,,,,,,,,,,,Canadian Monkeypox specification,,,,,,,,,,,,,,,,,,,,,,https://github.com/cidgoh/pathogen-genomics-package,,,,,,,,,,A data specification established for Monkeypox pathogen genomics contextual data (metadata) harmonization and curation across Canadian data providers.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001804,collection identifier,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001804,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,collection identifier,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_1023,borderline leprosy,,A leprosy that results in small numerous red irregularly shaped plaques.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:1023,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,borderline leprosy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A leprosy that results in small numerous red irregularly shaped plaques.,,,,,,,,
http://purl.obolibrary.org/obo/ExO_0000038,subject health status,medical state|medical condition|condition,"The condition of an organism in all aspects (e.g., functional or metabolic efficiency).",FALSE,,,,,,,,,,,,,,Damion Dooley note: GenEpiO includes various health status descriptors here; many are annotated as included in the American AHA HIPPA or United Kingdom NHS terminologies.  The challenge is to map them or order them in such a way that merged data can be analyzed.,,,cmattin,,,,https://en.wikipedia.org/wiki/Medical_state,,,,"See technical discussion about logic of assigning health status: 
https://www.w3.org/2001/sw/BestPractices/OEP/Lists-of-values-20040625/",,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,medical state|medical condition|condition,,,,ExO:0000038,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,subject health status,,,http://purl.obolibrary.org/obo/GENEPIO_0001845|http://purl.obolibrary.org/obo/GENEPIO_0001837,,,,,,,,,,,,,,,,,,,http://semanticscience.org/resource/SIO_010057,,,,,,,,,,"The condition of an organism in all aspects (e.g., functional or metabolic efficiency).",,,depth:1,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100464,isolated by contact email,isolated_by_contact_email|isolated by contact email,A data field which describes the email address of the contact responsible for follow-up regarding the isolate.,FALSE,,,,,,,PCDS:isolated_by_contact_email,,,,,,,"PCDS: Provide the email associated with the listed contact. As personnel turnover may render an individual's email obsolete, it is more prefereable to provide an address for a position or lab, to ensure accuracy of information and institutional memory. If the information is unknown or cannot be provided, leave blank or provide a null value.",,,,,,,,,,,,,,PCDS: enterics@lab.ca,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,isolated_by_contact_email|isolated by contact email,isolated by contact email slot,,,,GENEPIO:0100464,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,isolated by contact email,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the email address of the contact responsible for follow-up regarding the isolate.,,PCDS: The email address of the contact responsible for follow-up regarding the isolate.,,,,,,
http://purl.obolibrary.org/obo/ARO_3004406,bioMérieux,,Specific vendor of automated system of analysis for determining antimicrobial susceptibility headquartered in France. bioMérieux is the developer of the Vitek automated testing platform.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ARO:3004406,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/aro.owl,,,,,,,,,bioMérieux,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Specific vendor of automated system of analysis for determining antimicrobial susceptibility headquartered in France. bioMérieux is the developer of the Vitek automated testing platform.,,,,,,,,
http://purl.obolibrary.org/obo/ARO_3004440,CLSI antimicrobial phenotype,,Qualitative description of a microbial response to antimicrobial agents as described by CLSI using breakpoints that take into consideration tissue specificity of infection.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ARO:3004440,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/aro.owl,,,,,,,,,CLSI antimicrobial phenotype,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Qualitative description of a microbial response to antimicrobial agents as described by CLSI using breakpoints that take into consideration tissue specificity of infection.,,,"order:
ARO:3004303 # nonsensitive
ARO:3004300 # intermediate
ARO:3004302 # sensitive
ARO:3004304 # sensitive - dose dependant
ARO:3004301 # resistant",,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0345,Andorran,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0345,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Andorran,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0342,Kazakhstani,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0342,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Kazakhstani,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0348,Belarusian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0348,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Belarusian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0341,Afghan,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0341,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Afghan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0340,Uzbekistani,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0340,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Uzbekistani,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0349,Belgian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0349,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Belgian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0344,Albanian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0344,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Albanian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0346,Australian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0346,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Australian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0343,Kyrgyzstani,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0343,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Kyrgyzstani,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0347,Austrian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0347,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Austrian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0006538,respiratory system fluid/secretion,,A portion of organism substance that secreted_by a respiratory system.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C1514899|NCIT:C13722|MA:0002533|EMAPA:36550,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0006538,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,respiratory system fluid/secretion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A portion of organism substance that secreted_by a respiratory system.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0006530,seminal fluid,milt,A substance formed from the secretion of one or more glands of the male genital tract in which sperm cells are suspended.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MIAA:0000057|MAT:0000057|MA:0002523|FMA:62967|EMAPA:36543|CALOHA:TS-0918|BTO:0001232,,,,,,,,,,,,,,,,,,,,,,,,,seminal plasma,milt,,,UBERON:0006530,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,seminal fluid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A substance formed from the secretion of one or more glands of the male genital tract in which sperm cells are suspended.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0006539,mammary gland fluid/secretion,,"A substance that is secreted by a mammary gland. The substance may differ depending on phase, with colostrum produced during pregancy/early lactation, and milk produced afterwards.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MA:0002505|EMAPA:36538,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0006539,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,mammary gland fluid/secretion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A substance that is secreted by a mammary gland. The substance may differ depending on phase, with colostrum produced during pregancy/early lactation, and milk produced afterwards.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0006536,male reproductive gland secretion,male reproductive system fluid/secretion,A portion of organism substance that is secreted by a male reproductive gland.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MA:0002521|EMAPA:36541,,,,,,,,,,,,,,,,,,,,,,,,,male reproductive system fluid/secretion,,,,UBERON:0006536,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,male reproductive gland secretion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A portion of organism substance that is secreted by a male reproductive gland.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C199218,Death without Remission,Death without Remission,An indication that a subject died during treatment but had not achieved remission.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Death without Remission,,,,NCIT:C199218,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Death without Remission,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An indication that a subject died during treatment but had not achieved remission.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001257,exposure group statistics record,,An exposure group statistics record is a sumary of disease outbreak statistics on a certain date of a group of humans or animals potentially exposed to a pathogen.,FALSE,,,,,,,,,,,,,,An exposure group statistics record is a sumary of disease outbreak statistics on a certain date of a group of humans or animals potentially exposed to a pathogen.,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001257,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,exposure group statistics record,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000218,beef ribeye cap steak (raw),,A raw beef ribeye cap steak.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000218,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef ribeye cap steak (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef ribeye cap steak.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0020,Taiwanese,non-aboriginal Taiwanese,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,non-aboriginal Taiwanese,,,,HANCESTRO:0020,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Taiwanese,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0021,Chinese,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0021,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Chinese,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0023,Mongolian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0023,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Mongolian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0027,Han Chinese,Chinese Han,"Individuals who self-identify or are reported by authors as belonging to the Han people, an East Asian ethnic group native to Greater China.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Chinese Han,,,,HANCESTRO:0027,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Han Chinese,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Individuals who self-identify or are reported by authors as belonging to the Han people, an East Asian ethnic group native to Greater China.",,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0024,Macanese,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0024,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Macanese,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0025,Singaporean Chinese,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0025,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Singaporean Chinese,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0022,Korean,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0022,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Korean,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0026,Hong Kong Chinese,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0026,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Hong Kong Chinese,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03309104,"herring fillet (smoked, and vegetables)",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://bioregistry.io/reference/siren:F9104,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03309104,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"herring fillet (smoked, and vegetables)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_8410050,anorectum,anorectal canal,"A subdivision of the digestive tract in humans that includes the rectum, the anal canal and the anus.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,anorectal canal,,,UBERON:8410050,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,anorectum,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A subdivision of the digestive tract in humans that includes the rectum, the anal canal and the anus.",,,,,,,,
http://purl.obolibrary.org/obo/OBI_0001620,latitude coordinate measurement datum,,A measurement datum that is the measure of the latitude coordinate of a site.,FALSE,,,,,,,latitude,,,,,,,"See http://www.csgnetwork.com/gpscoordconv.html

See http://www.geomidpoint.com/latlon.html
See http://www.ontobee.org/browser/rdf.php?o=OBI&iri=http://purl.obolibrary.org/obo/OBI_0001621
See http://www.w3.org/2003/01/geo/wgs84_pos",,,,,,,NIAID GSCID-BRC metadata working group,,,,"Damion Dooley's note: IAO lat/long can't be made a subclass of ""angular coordinate"" or disjoint contradiction arises.",latitude coordinate measurement datum,,,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0001620,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,latitude coordinate measurement datum,,,,,,,Specimen Collection Location - Latitude,,,,,,,,,,,,,,,,,,,,,"Person: Chris Stoeckert, Jie Zheng",,,,A measurement datum that is the measure of the latitude coordinate of a site.,,,"help:Latitude should not be abstracted to the centre of a city, province/state or country as this may falsely implicate an existing location.",,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100217,hiking trail exposure process,,A process that exposes the recipient organism to a material entity as a consequence of hiking.,FALSE,,,,,,,Hiking Trail,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100217,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,hiking trail exposure process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A process that exposes the recipient organism to a material entity as a consequence of hiking.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100280,sampling location name county region,geographical location county or region name|geo_loc name (county/region)|geo_loc name (county),A data field which describes the county or region of origin of the sample.,FALSE,,,,,,,PCDS:geo_loc_name_county_region,,,,,,,PCDS: Provide the county/region name from the GAZ geography ontology. Search for geography terms here: https://www.ebi.ac.uk/ols/ontologies/gaz,,,,,,,,,,,,,,PCDS: Derbyshire,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,geographical location county or region name|geo_loc name (county/region)|geo_loc name (county),sample collection name county region,,,,GENEPIO:0100280,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,sampling location name county region,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the county or region of origin of the sample.,,PCDS: The county/region of origin of the sample.,,,,,,
http://purl.obolibrary.org/obo/CHEBI_36364,alkaline earth salt,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:36364,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,alkaline earth salt,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0002823,pre-moistened swab stick,,A specimen collection swab stick that is pre-moistened with liquid prior to sampling.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,pre-moistened swab stick,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0002823,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,pre-moistened swab stick,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://orcid.org/0000-0002-8844-9165,,,,A specimen collection swab stick that is pre-moistened with liquid prior to sampling.,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0021682,viral sexually transmitted disease,viral sexually transmitted disease,Viral diseases which are potentially transmitted or propagated by sexual conduct.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0036918|MESH:D015229|MEDGEN:48646,,,,,,,,,,,,,,,,,,,,,,,,,viral sexually transmitted disease,,,,MONDO:0021682,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,,,,,,,,,viral sexually transmitted disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Viral diseases which are potentially transmitted or propagated by sexual conduct.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03440011,extent of food heat treatment,,Used to broadly characterize a food product based on the extent of heat applied. Heat treatment affects the flavor and textural characteristics of a food and thus consumer preparation time. Heat treatment causes chemical changes and/or reduction of enzyme and of microbial activity and thus affects food safety and shelflife. Specifics of preparation are covered by *G. COOKING METHOD* and *H. TREATMENT APPLIED*. [FDA CFSAN 1995],FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=F0011,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03440011,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,extent of food heat treatment,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Used to broadly characterize a food product based on the extent of heat applied. Heat treatment affects the flavor and textural characteristics of a food and thus consumer preparation time. Heat treatment causes chemical changes and/or reduction of enzyme and of microbial activity and thus affects food safety and shelflife. Specifics of preparation are covered by *G. COOKING METHOD* and *H. TREATMENT APPLIED*. [FDA CFSAN 1995],,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000016,polar coordinate system,,"In mathematics, the polar coordinate system is a two-dimensional coordinate system in which each point on a plane is determined by a distance from a fixed point and an angle from a fixed direction.",FALSE,,,,,,,,,,,,,,,,,,,,,http://en.wikipedia.org/wiki/Polar_coordinate_system,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000125,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000016,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,polar coordinate system,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra|Orlaith Burke|Alejandra Gonzalez-Beltran,,,,"In mathematics, the polar coordinate system is a two-dimensional coordinate system in which each point on a plane is determined by a distance from a fixed point and an angle from a fixed direction.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000095,beef 7-bone chuck steak,,A beef steak cut that is identified by its 7-shaped bone. The 7-bone is made by cutting steaks across the scapula or blade bone.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000095,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef 7-bone chuck steak,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A beef steak cut that is identified by its 7-shaped bone. The 7-bone is made by cutting steaks across the scapula or blade bone.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0600012,environmental material collection process,,"environmental_material_collection is an acquisition where an object is taken from an environment and put into a storage container. Roles include, environment, thing collected, container, acquirer.",FALSE,,,,,,,,,,,,,,,,,,,,the researcher is very interested in the location,IEDB,,,,"relabel the term and add axiom connecting to EnVO:'environmental material'
discussed on obi-dev call 9/28/2015, details see: https://sourceforge.net/p/obi/obi-terms/779/",environmental material collection,,Taking 1 liter of surface ocean water from the San Diego Mission Bay Jetty. Capturing mice living in rural Arkansas,,,http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0600012,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,environmental material collection process,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Bjoern Peters, Alan Ruttenberg",,,,"environmental_material_collection is an acquisition where an object is taken from an environment and put into a storage container. Roles include, environment, thing collected, container, acquirer.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000313,pork loin country-style ribs (boneless),,Boneless pork loin country-style ribs.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000313,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pork loin country-style ribs (boneless),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Boneless pork loin country-style ribs.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510240,modified ethnic food claim,,"Modified ethnic food: a commercially-available version of a food that has been modified to suit the taste and preference of the host country. [Ethnic Groups and Foods in Europe, EuroFIR Synthesis report No 3, 2005]",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0240,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510240,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,modified ethnic food claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Modified ethnic food: a commercially-available version of a food that has been modified to suit the taste and preference of the host country. [Ethnic Groups and Foods in Europe, EuroFIR Synthesis report No 3, 2005]",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02021252,sheep material,,Material that derives from some sheep.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02021252,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,sheep material,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Material that derives from some sheep.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C49642,Preterm Infant,Preterm Infant|Premature Infant,"An age group comprised of infants less than 37 weeks, 0 days gestational age.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Preterm Infant|Premature Infant,,,,NCIT:C49642,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Preterm Infant,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An age group comprised of infants less than 37 weeks, 0 days gestational age.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490103,"plastic squeeze bottle or tube, top lined with laminate",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0103,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490103,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"plastic squeeze bottle or tube, top lined with laminate",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000082,sequencing kit version,,A string datum which is the version/configuration of the reagent cartidge.,FALSE,,,,,,,,,,,,,,,,,,,,,GROUP: IRIDA Ontology (Emma),,,,,,,"v2, v3",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000082,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,,,,,,,sequencing kit version,,,,,Sequencing,,,,,,,,,,,,,,,,,,,,,,Sequencing Kit version,,,Derived from Illumina Sample Sheet,,A string datum which is the version/configuration of the reagent cartidge.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510107,no artificial ingredients claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0107,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510107,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,no artificial ingredients claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001740,line list row record,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001740,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,line list row record,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://semanticscience.org/resource/SIO_001027,medical health record,,A medical health record is a record of a single patient's medical history.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,resource:SIO_001027,,,,,,,,,,,,,,,,,,,,,,,,http://semanticscience.org/ontology/sio.owl,,,,,,,,,medical health record (history / timeline)|medical health record,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A medical health record is a record of a single patient's medical history.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01001789,freshwater ecosystem,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01001789,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,freshwater ecosystem,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100110,Illumina HiSeq,,"A DNA sequencer manufactured by the Illumina corporation using sequence-by-synthesis chemistry, enabling deep sequencing and high yield.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100110,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,Illumina HiSeq,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A DNA sequencer manufactured by the Illumina corporation using sequence-by-synthesis chemistry, enabling deep sequencing and high yield.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000064,beef sierra steak (raw),,A raw beef sierra steak.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000064,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef sierra steak (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef sierra steak.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_5280,gatifloxacin,,"A monocarboxylic acid that is 4-oxo-1,4-dihydroquinoline-3-carboxylic acid which is substituted on the nitrogen by a cyclopropyl group and at positions 6, 7, and 8 by fluoro, 3-methylpiperazin-1-yl, and methoxy groups, respectively. Gatifloxacin is an antibiotic of the fourth-generation fluoroquinolone family, that like other members of that family, inhibits the bacterial topoisomerase type-II enzymes.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:101712,,,,,,CHEBI:5280,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,gatifloxacin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A monocarboxylic acid that is 4-oxo-1,4-dihydroquinoline-3-carboxylic acid which is substituted on the nitrogen by a cyclopropyl group and at positions 6, 7, and 8 by fluoro, 3-methylpiperazin-1-yl, and methoxy groups, respectively. Gatifloxacin is an antibiotic of the fourth-generation fluoroquinolone family, that like other members of that family, inhibits the bacterial topoisomerase type-II enzymes.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C33556,Sinus,sinus|Sinus|SINUS,"A recess, cavity, or channel.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,sinus|Sinus|SINUS,,,,NCIT:C33556,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Sinus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A recess, cavity, or channel.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102294,Illumina MiSeq i100,,A DNA sequencer which is manufactured by the Illumina corporation and that is a benchtop model and is designated as part of the MiSeq i100 product series.,FALSE,,,,,,,,,,,,,,,,,,,,,https://www.illumina.com/content/dam/illumina/gcs/assembled-assets/marketing-literature/miseq-i100-specification-sheet-m-gl-02244/miseq-i100-specification-sheet-m-gl-02244.pdf,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102294,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2026-04-09T20:09:50.637Z,,,,,,,,,,,,,,,,,,,Illumina MiSeq i100,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://github.com/GenEpiO/genepio/issues/90,A DNA sequencer which is manufactured by the Illumina corporation and that is a benchtop model and is designated as part of the MiSeq i100 product series.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00000460,Eurasia,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00000460,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Eurasia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00000462,Antarctica,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,INSDC:country:antarctica,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00000462,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Antarctica,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00000468,Oceania,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00000468,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Oceania,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001786,obsolete: sample city,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000227,,,,,,,,,,,,,,,,,,,GENEPIO:0001786,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: sample city,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,http://purl.obolibrary.org/obo/GENEPIO_0001785,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002105,specimen processing organization type,,"An organization related to the collection, isolate production, sequencing or storage of specimen material or data.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002105,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,specimen processing organization type,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"An organization related to the collection, isolate production, sequencing or storage of specimen material or data.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001705,obsolete: draft GenEpiO BioProject standard,,This is an organizational category for grouping parameters relevant to biomedical research projects.,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000103,,,,,,,,,,,,,,,,,,,GENEPIO:0001705,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: draft GenEpiO BioProject standard,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,This is an organizational category for grouping parameters relevant to biomedical research projects.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03450019,cooking by braising,,Browned initially in fat and then tightly covered and cooked over low heat in a small amount of water.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=G0019,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03450019,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,cooking by braising,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Browned initially in fat and then tightly covered and cooked over low heat in a small amount of water.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530155,tail,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0155,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530155,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,tail,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000087,polychotomous variable,,a polychotomous variable  is a categorical variable  which is defined to have minimally 2 categories or possible values,FALSE,,,,,,,,,,,,,,,,,,,,,http://udel.edu/~mcdonald/statvartypes.html|STATO,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000087,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,polychotomous variable,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra|Alejandra Gonzalez-Beltran|Orlaith Burke,,,,a polychotomous variable  is a categorical variable  which is defined to have minimally 2 categories or possible values,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001224,pregnancy history item,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001224,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,pregnancy history item,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0002513,endochondral bone,ossified chondrogenic bone,Replacement bone that forms within cartilage.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ZFA:0001591|XAO:0004018|VSAO:0000145|TAO:0001591|FMA:24321|EHDAA2:0003083|BTO:0002157|AEO:0000083|AAO:0010776,,,,,,,,,,,,,,,,,,,,,,,,,ossified chondrogenic bone,,,,UBERON:0002513,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,endochondral bone,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Replacement bone that forms within cartilage.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0101073,sample collection end time,sample collection end time,A data field which describes the time at which sample collection ended.,FALSE,,,,,,,PCDS:sample_collection_end_time,,,,,,,"PCDS: Provide this time in ISO 8601 24hr format, in your local time.",,,,,,,,,,,,,,PCDS: 19:15 PST,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,sample collection end time,sample collection end time slot,,,,GENEPIO:0101073,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,sample collection end time,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the time at which sample collection ended.,,PCDS: The time at which sample collection ended.,,,,,,
http://purl.obolibrary.org/obo/CHEBI_17792,organohalogen compound,,A compound containing at least one carbon-halogen bond (where X is a halogen atom).,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:8767|CHEBI:36684|CHEBI:13444,,,,,,CHEBI:17792,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,organohalogen compound,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A compound containing at least one carbon-halogen bond (where X is a halogen atom).,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000011,garden,,An enclosure for displaying selected plant or animal life.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Garden|TGN:53010|Geonames:S.GDN|FTT:743|FTT:31,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00000011,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,garden,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An enclosure for displaying selected plant or animal life.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100025,personal protective gown,,A personal protective clothing item which is a gown worn in order to provide a barrier between a person and the external environment.,FALSE,,,,,,,protective gown | personal protective equipment gown | PPE gown,,,,,,,,,,,,,,Rhiannon Cameron,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",personal protective gown,,,,,requires discussion,http://purl.obolibrary.org/obo/OBI_0003453,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100025,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,personal protective gown,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788,,,,A personal protective clothing item which is a gown worn in order to provide a barrier between a person and the external environment.,,,,,,,,
http://purl.obolibrary.org/obo/OMIT_0027578,Urine Specimen Collection,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OMIT:0027578,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/omit.owl,,,,,,,,,Urine Specimen Collection,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/OBA_2055785,age of onset of obesity disorder,age obesity disorder symptoms begin|age at onset of obesity disorder,The age at which obesity disorder manifestations first appear.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,age obesity disorder symptoms begin|age at onset of obesity disorder,,,,OBA:2055785,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age of onset of obesity disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The age at which obesity disorder manifestations first appear.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000028,millisecond,ms,A time unit which is equal to one thousandth of a second or 10^[-3] s.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ms,,,,UO:0000028,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,millisecond,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A time unit which is equal to one thousandth of a second or 10^[-3] s.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000020,picometer,pm|picometre,A length unit which is equal to 10^[-12] m.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,pm|picometre,,,,UO:0000020,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,picometer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A length unit which is equal to 10^[-12] m.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000029,microsecond,us,A time unit which is equal to one millionth of a second or 10^[-6] s.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,us,,,,UO:0000029,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,microsecond,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A time unit which is equal to one millionth of a second or 10^[-6] s.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000027,degree Celsius,C,"A temperature unit which is equal to one kelvin degree. However, they have their zeros at different points. The centigrade scale has its zero at 273.15 K.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,C,,,,UO:0000027,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,degree Celsius,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A temperature unit which is equal to one kelvin degree. However, they have their zeros at different points. The centigrade scale has its zero at 273.15 K.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03430146,"whole, shape achieved by forming, thickness bigger than 7 cm.",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=E0146,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03430146,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"whole, shape achieved by forming, thickness bigger than 7 cm.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000247,millivolt,mV,An electric potential difference unit which is equal to one thousandth of a volt or 10^[-3] V.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,mV,,,,UO:0000247,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,millivolt,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An electric potential difference unit which is equal to one thousandth of a volt or 10^[-3] V.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000244,base pair,bp|basepair,A count unit which contains one nucleotide.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,bp|basepair,,,,UO:0000244,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,base pair,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A count unit which contains one nucleotide.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002011,"TB lineage 4 - Euro-American, includes Haarlem, LAM3, X, T, F11, H37Rv",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002011,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"TB lineage 4 - Euro-American, includes Haarlem, LAM3, X, T, F11, H37Rv",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_35406,oxoanion,,An oxoanion is an anion derived from an oxoacid by loss of hydron(s) bound to oxygen.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:33436|CHEBI:33274,,,,,,CHEBI:35406,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,oxoanion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An oxoanion is an anion derived from an oxoacid by loss of hydron(s) bound to oxygen.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100850,artic-v4 strategy,,An amplicon strategy which was developed by the ARTIC consortium for SARS-CoV-2 with the attributes of version 4.0.0.,FALSE,,,,,,,artic-v4|artic v4,,,,,,,,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100850,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2026-04-13T19:52:38.515Z,,,,,,,,,,,,,,,,,,,artic-v4 strategy,,,,,,,,,,,,,,,,,,,,,,https://community.artic.network/t/sars-cov-2-version-4-scheme-release/312,,,,,,,,,,An amplicon strategy which was developed by the ARTIC consortium for SARS-CoV-2 with the attributes of version 4.0.0.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490114,ceramic or earthenware bottle,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0114,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490114,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,ceramic or earthenware bottle,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_8480057,right supraclavicular lymph node,,"Supraclavicular lymph node located on the right side of a entire appendicular skeleton. The right supraclavicular lymph node drains the breast, lung and upper esophagus into the right lymphatic duct.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:8480057,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,right supraclavicular lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Supraclavicular lymph node located on the right side of a entire appendicular skeleton. The right supraclavicular lymph node drains the breast, lung and upper esophagus into the right lymphatic duct.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_8480058,Virchow's lymph node,Virchow's node,"Lymph node that is the most proximal of the left supraclavicular lymph nodes. It receives afferent lymphatic drainage from the left head, neck, chest, abdomen, pelvis, and bilateral lower extremities, and drains into the jugulo-subclavian venous junction via the thoracic duct.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Virchow's node,,,,UBERON:8480058,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,Virchow's lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Lymph node that is the most proximal of the left supraclavicular lymph nodes. It receives afferent lymphatic drainage from the left head, neck, chest, abdomen, pelvis, and bilateral lower extremities, and drains into the jugulo-subclavian venous junction via the thoracic duct.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_8480056,left supraclavicular lymph node,,"Supraclavicular lymph node located on the left side of a entire appendicular skeleton. The left supraclavicular lymph node drains the kidney, cervix, testis, and pancreas into the thoracic duct.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:8480056,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,left supraclavicular lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Supraclavicular lymph node located on the left side of a entire appendicular skeleton. The left supraclavicular lymph node drains the kidney, cervix, testis, and pancreas into the thoracic duct.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_8480054,ileocecal lymph node,ileocaecal lymph node,Mesenteric lymph node embedded in the ileocecal fold at both sides of the concavity of the cecum. It drains the terminal ileum.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ileocaecal lymph node,,,,UBERON:8480054,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,ileocecal lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Mesenteric lymph node embedded in the ileocecal fold at both sides of the concavity of the cecum. It drains the terminal ileum.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_8480055,subcarinal lymph node,left subcarinal lymph node,"Superior mediastinal lymph node located in the thoracic cavity between the lungs. It is bordered by the carina of the trachea, the lower lobe bronchus on the left and the intermediate bronchus on the right.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,subcarinal node,left subcarinal lymph node,,,UBERON:8480055,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,subcarinal lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Superior mediastinal lymph node located in the thoracic cavity between the lungs. It is bordered by the carina of the trachea, the lower lobe bronchus on the left and the intermediate bronchus on the right.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_8480059,perigastric lymph node,perigastric node|peri-gastric node|peri-gastric lymph node,Lymph node located in the perigastric region.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,perigastric node|peri-gastric node|peri-gastric lymph node,,,,UBERON:8480059,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,perigastric lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Lymph node located in the perigastric region.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0002038,Protein avoidance,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C1839531,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0002038,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Protein avoidance,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HP_0002037,Inflammation of the large intestine,Inflammation of the large intestine,"Inflammation, or an inflammatory state in the large intestine.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0578878|UMLS:C0021390|SNOMEDCT_US:302168000|SNOMEDCT_US:24526004,,,,,,,,,,,,,,,,,,,,,,,,,Inflammation of the large intestine,,,,HP:0002037,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Inflammation of the large intestine,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Inflammation, or an inflammatory state in the large intestine.",,,,,,,,
http://purl.obolibrary.org/obo/HP_0002033,Poor suck,Sucking weakness|Poor sucking|Poor suck,"An inadequate sucking reflex, resulting in the difficult of newborns to be breast-fed.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C1837142,,,,,,,,,,,,,,,,,,,,,,,,,Sucking weakness|Poor sucking|Poor suck,,,,HP:0002033,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Poor suck,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An inadequate sucking reflex, resulting in the difficult of newborns to be breast-fed.",,,,,,,,
http://purl.obolibrary.org/obo/HP_0002039,Anorexia,Refusing to eat|Obsessive dieting|Deliberately not eating|Anorexia,Lack of desire to eat (loss of appetite).,FALSE,,,,,,,,,,,,,,"Please note that this term does not refer to the condition of anorexia nervosa, which is a disorder characterized by an obsessive desire to lose weight by refusing to eat. The term is considered more severe than ""Poor appetite"".",,,,,,,,,,,,,,,,,,UMLS:C0003123|SNOMEDCT_US:79890006,,,,,,,,,,,,,,,,,,,,,,,,,Refusing to eat|Obsessive dieting|Deliberately not eating|Anorexia,,,,HP:0002039,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Anorexia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Lack of desire to eat (loss of appetite).,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00004545,buffalo steak,,A buffalo meat cut that has a flat-cut appearance.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00004545,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,buffalo steak,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A buffalo meat cut that has a flat-cut appearance.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100864,midnight-v2 strategy,,An amplicon strategy which targets SARS-CoV-2 and was developed by Oxford Nanopore Technologies with the attributes of version 2.0.0 which produces amplicons approximately 1200bp in length.,FALSE,,,,,,,midnight-v2|midnight v2,,,,,,,,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100864,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2026-04-13T19:52:38.515Z,,,,,,,,,,,,,,,,,,,midnight-v2 strategy,,,,,,,,,,,,,,,,,,,,,,https://www.protocols.io/view/ncov-2019-sequencing-protocol-rapid-barcoding-1200-rm7vz8q64vx1/v2,,,,,,,,,,An amplicon strategy which targets SARS-CoV-2 and was developed by Oxford Nanopore Technologies with the attributes of version 2.0.0 which produces amplicons approximately 1200bp in length.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530020,brisket,,A cut of meat from the breast or lower chest of beef or veal.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0020,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530020,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,brisket,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A cut of meat from the breast or lower chest of beef or veal.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001928,SOLiD 4hq System,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI SRA: AB SOLiD 4hq,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001928,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SOLiD 4hq System,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0001762,turbinate bone,turbinate bone|turbinal bone|ossified turbinate|ossified nasal turbinate|ossified nasal turbinal,The small curved bones that extends horizontally along the lateral wall of the nasal passage.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Nasal_concha|UMLS:C1266928|SCTID:361931007|NCIT:C49594|MESH:D014420|MA:0000286|GAID:224|EMAPA:25093|EHDAA2:0004101,,,,,,,,,,,,,,,,,,,,,,,,,turbinate bone|turbinal bone|ossified turbinate|ossified nasal turbinate|ossified nasal turbinal,,,,UBERON:0001762,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,turbinate bone,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The small curved bones that extends horizontally along the lateral wall of the nasal passage.,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_1879032,Mus musculus isatissus,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,Mus musculus isatissus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:1879032,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Mus musculus isatissus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102196,liter per minute,,A volumetric flow rate unit which is the measure of the volume of one liter of matter crosses a given surface during the period of time equal to one minute.,FALSE,,,,,,,L/min,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102196,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2026-04-13T19:52:38.515Z,,,,,,,,,,,,,,,,,,,liter per minute,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A volumetric flow rate unit which is the measure of the volume of one liter of matter crosses a given surface during the period of time equal to one minute.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03450040,food reheating by boil-in-bag,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=G0040,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03450040,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food reheating by boil-in-bag,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000259,lamb sirloin half (raw),,A raw lamb sirloin half cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000259,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lamb sirloin half (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw lamb sirloin half cut.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000146,draft WGS lab sequencing record,,A data specification which records the sequencing datum of a draft whole genome sequencing product.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000146,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,draft WGS lab sequencing record,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A data specification which records the sequencing datum of a draft whole genome sequencing product.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000298,ribeye roast,,A roast that is derived from the center cut rib section of the loin.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000298,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,ribeye roast,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A roast that is derived from the center cut rib section of the loin.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_32215,thiamphenicol,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:32215,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,thiamphenicol,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00005409,pork center cut-chop,,"A pork chop that is derived from any pork loin item, after the removal of the blade, and sirloin portions of the loin  and will include both T-bone and Ribeye chop.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00005409,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pork center cut-chop,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A pork chop that is derived from any pork loin item, after the removal of the blade, and sirloin portions of the loin  and will include both T-bone and Ribeye chop.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_22723,benzoic acids,,Any aromatic carboxylic acid that consists of benzene in which at least a single hydrogen has been substituted by a carboxy group.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:22723,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,benzoic acids,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any aromatic carboxylic acid that consists of benzene in which at least a single hydrogen has been substituted by a carboxy group.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100586,data field,data column,A data item which is a location for a predetermined type of data.,FALSE,,,,,,,,,,,,,,,,,,,,,https://analystanswers.com/what-is-a-data-field-definition-types-examples/,,,,Value specification axioms will be applied to fields when true in all instances of a field. They have not yet been applied since they are undergoing a community review as of December 2022.,,,"The ""specimen collector sample ID"" is where one can store sample identifiers given by the specimen collector.",,,to be replace with external ontology term|http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,data column,data slot,,,,GENEPIO:0100586,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|http://orcid.org/0000-0002-9578-0788,2022-11-23T00:33:27.896Z,,,,,,,,,,,,,,,,,,,data field,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data item which is a location for a predetermined type of data.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000220,beef ribeye cap roll (raw),,A beef ribeye cap roll cut that is raw.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000220,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef ribeye cap roll (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A beef ribeye cap roll cut that is raw.,,,,,,,,
http://purl.obolibrary.org/obo/OMIT_0023669,Enzymes and Coenzymes,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OMIT:0023669,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/omit.owl,,,,,,,,,Enzymes and Coenzymes,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0002021,Illumina NextSeq 500,,"A DNA sequencer which is a desktop sequencer ideal for smaller-scale studies manufactured by the Illumina corporation. It supports sequencing of single, long or short insert paired end clone libraries relying on sequencing by synthesis technology.",FALSE,,,,,,,NextSeq 500,,,,,,,,,,,,,,http://systems.illumina.com/systems/nextseq-sequencer.html,,,,,Illumina NextSeq 500,,,,,http://purl.obolibrary.org/obo/IAO_0000120,NCBI SRA: Illumina NextSeq,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0002021,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Illumina NextSeq 500,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Person: Venkat Malladi, Chris Stoeckert, Jie Zheng",,,,"A DNA sequencer which is a desktop sequencer ideal for smaller-scale studies manufactured by the Illumina corporation. It supports sequencing of single, long or short insert paired end clone libraries relying on sequencing by synthesis technology.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0101071,sample collection end date,sample collection end date,A data field which describes the date on which sample collection ended.,FALSE,,,,,,,PCDS:sample_collection_end_date,,,,,,,PCDS: Provide the date that sample collection ended in ISO 8601 format i.e. YYYY-MM-DD,,,,,,,,,,,,,,PCDS: 2020-03-18,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,sample collection end date,sample collection end date slot,,,,GENEPIO:0101071,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,sample collection end date,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the date on which sample collection ended.,,PCDS: The date on which sample collection ended for a continuous sample.,,,,,,
http://purl.obolibrary.org/obo/CHEBI_7508,framycetin,,"A tetracyclic antibacterial agent derived from neomycin, being a glycoside ester of neamine and neobiosamine B.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:44577,,,,,,CHEBI:7508,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,framycetin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A tetracyclic antibacterial agent derived from neomycin, being a glycoside ester of neamine and neobiosamine B.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001518,dataharmonizer provenance,DataHarmonizer provenance,A data field which describes the DataHarmonizer software and template version provenance.,FALSE,,,,,,,PCDS:dataharmonizer_provenance,,,,,,,PCDS: The current software and template version information will be automatically generated in this field after the user utilizes the 'validate' function. This information will be generated regardless as to whether the row is valid of not.,,,,,,,,,,,,,,"PCDS: DataHarmonizer v1.4.3, AMBR v1.0.0",,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,DataHarmonizer provenance,DataHarmonizer provenance slot,,,,GENEPIO:0001518,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-12-22T00:55:53.808Z,,,,,,,,,,,,,,,,,,,dataharmonizer provenance,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the DataHarmonizer software and template version provenance.,,PCDS: The DataHarmonizer software and template version provenance.,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000086,plain,,"A region of general uniform slope, comparatively level, and of considerable extent.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Plain|TGN:21461|SWEETRealm:Plain|Geonames:T.PLN|FTT:926|FTT:874|FTT:707|EcoLexicon:plain,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00000086,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,plain,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A region of general uniform slope, comparatively level, and of considerable extent.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0001836,saliva,salivary gland secretion,"A fluid produced in the oral cavity by salivary glands, typically used in predigestion, but also in other functions.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:Saliva|Wikipedia:Saliva|UMLS:C0036087|NCIT:C13275|MESH:D012463|MAT:0000444|MA:0002507|GAID:1167|FMA:59862|ENVO:02000036|EMAPA:36536|CALOHA:TS-0891|BTO:0001202,,,,,,,,,,,,,,,,,,,,,,,,,salivary gland secretion,,,,UBERON:0001836,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,saliva,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A fluid produced in the oral cavity by salivary glands, typically used in predigestion, but also in other functions.",,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0005071,nervous system disorder,neurological disorder|neurological disease|neurologic disorder|neurologic disease|nervous system disorder|nervous system disease or disorder|nervous system disease|disorder of nervous system|disease or disorder of nervous system|disease of nervous system,"A non-neoplastic or neoplastic disorder that affects the brain, spinal cord, or peripheral nerves.",FALSE,,,,,,,,,,,,,,"'psychiatric disorder' is not classified as a 'nervous system disorder' in Mondo (though it is often as such): the hallmarks of psychiatric disorders are based in behavior and emotional state, and the relation with nervous system malfunction or damage is not always clearly determined.",,,,,,,,,,,,,,,,,,Wikipedia:Nervous_system_disease|UMLS:C0027765|SCTID:118940003|NCIT:C26835|MESH:D009422|MEDGEN:14336|ICD9:349.9|ICD9:349.89|ICD10CM:G00-G99|EFO:0000618|DOID:863,,,,,,,,,,,,,,,,,,,,,,,,,neurological disorder|neurological disease|neurologic disorder|neurologic disease|nervous system disorder|nervous system disease or disorder|nervous system disease|disorder of nervous system|disease or disorder of nervous system|disease of nervous system,,,,MONDO:0005071,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#rare_grouping|http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar|http://purl.oboInOwllibrary.org/oboInOwl/mondo#harrisons_view,,,,,,,,nervous system disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A non-neoplastic or neoplastic disorder that affects the brain, spinal cord, or peripheral nerves.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02010031,"piece of animal (skinless, raw)",,A raw skinless piece of animal.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02010031,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"piece of animal (skinless, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw skinless piece of animal.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000324,planetary surface,,A planetary surface is a surface layer where the solid or liquid material of a planet comes into contact with an atmosphere or outer space.,FALSE,,,,,,,,,,,,,,a useful class: this can be used to define sub-terrestrial and sub-marine entities,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01000324,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,planetary surface,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A planetary surface is a surface layer where the solid or liquid material of a planet comes into contact with an atmosphere or outer space.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001402,complications,complications,A data field which describes medical complications that are believed to have occurred as a result of host disease.,FALSE,,,,,,,PCDS:complications,,,,,,,PCDS: Select all of the complications experienced by the host from the pick list.,,,,,,,,,,,,,,PCDS: Delayed wound healing (lesion healing),,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,complications,complications slot,,,,GENEPIO:0001402,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,complications,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes medical complications that are believed to have occurred as a result of host disease.,,PCDS: Patient medical complications that are believed to have occurred as a result of host disease.,,,,,,
http://purl.obolibrary.org/obo/FOODON_03307811,"tuna fillet (light meat, raw)",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://bioregistry.io/reference/siren:F7811,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03307811,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"tuna fillet (light meat, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510239,authentic ethnic food claim,,"Authentic ethnic food is food from countries other than the home market contributing to a different food culture than the traditional cuisine of the host country. Food may be adapted by combining local and imported ingredients. [Ethnic Groups and Foods in Europe, EuroFIR Synthesis report No 3, 2005]",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0239,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510239,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,authentic ethnic food claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Authentic ethnic food is food from countries other than the home market contributing to a different food culture than the traditional cuisine of the host country. Food may be adapted by combining local and imported ingredients. [Ethnic Groups and Foods in Europe, EuroFIR Synthesis report No 3, 2005]",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_33671,heteropolycyclic compound,,A polycyclic compound in which at least one of the rings contains at least one non-carbon atom.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:33671,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,heteropolycyclic compound,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A polycyclic compound in which at least one of the rings contains at least one non-carbon atom.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000377,artificial lake,,A lake purposefully constructed.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Artificial_lake,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00000377,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,artificial lake,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A lake purposefully constructed.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000127,food brought back from travel,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000127,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,food brought back from travel,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0001905,secondary cultured cell population,,A cultured cell population that is derived through one or more passages in culture.,FALSE,,,,,,,secondary cell culture sample,,,,,,,"The concept of a 'secondary cultured cell population' covers cell lines as well as cultured cell populations more immediately derived from a primary culture which have yet to achieve adequate genetic stability and compositional homogeneity to be considered a cell line. The extent of the collection of cells in a 'secondary cultured cell population' is restricted only in that all cell members must share a propagation history (ie be derived through a common lineage of passages from an initial culture).  Secondary cultured cell populations can be under active culture, stored in a quiescent state for future use, or applied experimentally.",,,,,,,PERSON:Matthew Brush,,,,,secondary cultured cell population,,,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0001905,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/clo.owl,,,,,,,,,secondary cultured cell population,,,,,,,,,,,,,,,,,,,,,,,,,,,,PERSON:Matthew Brush,,,,A cultured cell population that is derived through one or more passages in culture.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102070,lineage clade analysis date,,"PCDS: Providing the date that an analyis was performed can help provide context for tool and reference database versions. Provide the date that the analysis was performed in ISO 8601 format, i.e. 'YYYY-MM-DD'.",FALSE,,,,,,,PCDS:lineage_clade_analysis_date,,,,,,,"PCDS: Providing the date that an analyis was performed can help provide context for tool and reference database versions. Provide the date that the analysis was performed in ISO 8601 format, i.e. 'YYYY-MM-DD'.",,,,,,,,,,,,,,PCDS: 2024-02-01,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102070,,,,,,,,,,,,,,2026-04-13T17:16:47.336Z,,,,,,,,,,,,,,,,,,,lineage clade analysis date,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PCDS: The date of the lineage/clade analysis was performed.,,,,,,
http://purl.obolibrary.org/obo/GAZ_00003717,Province (Rwanda),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00003717,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Province (Rwanda),http://purl.obolibrary.org/obo/GAZ_00001087,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100202,ambulance exposure process,,A process occuring within or in the vicinity of an ambulance that exposes the recipient organism to a material entity.,FALSE,,,,,,,Ambulance,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100202,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,ambulance exposure process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A process occuring within or in the vicinity of an ambulance that exposes the recipient organism to a material entity.,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0004670,lupus erythematosus,lupus erythematosus|lupus,"An autoimmune, connective tissue chronic inflammatory disorder affecting the skin, joints, kidneys, lungs, heart, and the peripheral blood cells. It is more commonly seen in women than men. Variants include discoid and systemic lupus erythematosus.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,icd11.foundation:1443317238|UMLS:C0409974|SCTID:200936003|NCIT:C27153|MEDGEN:98043|ICD9:695.4|ICD10WHO:L93|ICD10CM:L93|DOID:8857,,,,,,,,,,,,,,,,,,,,,,,,,lupus erythematosus|lupus,,,,MONDO:0004670,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,lupus erythematosus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An autoimmune, connective tissue chronic inflammatory disorder affecting the skin, joints, kidneys, lungs, heart, and the peripheral blood cells. It is more commonly seen in women than men. Variants include discoid and systemic lupus erythematosus.",,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000015,ocean,,A marine water body which is constitutes the majority of an astronomical body's hydrosphere.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Ocean|TGN:21102|SWEETRealm:Ocean|LTER:695|Geonames:H.OCN|FTT:943|FTT:1019|EcoLexicon:ocean,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00000015,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,envoPolar|envoMarine,,,,,,,,ocean,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A marine water body which is constitutes the majority of an astronomical body's hydrosphere.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000064,riboprinting,,"This method is based on restriction endonuclease digestion of bacterial chromosomal DNA, followed by Southern hybridization to probes for sequences in the regions of bacterial DNA coding for the 5S-16S-23S (the Escherichia coli rrnB rRNA operon) rRNA operon. The probes have been developed that are directed to highly conserved regions of the rRNA operon present in all eubacteria and can therefore be used for ribotyping most bacteria",FALSE,,,,,,,,,,,,,,,,,,,,,http://www.ncbi.nlm.nih.gov/pmc/articles/PMC92620/,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000064,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,,,,,,,riboprinting,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"This method is based on restriction endonuclease digestion of bacterial chromosomal DNA, followed by Southern hybridization to probes for sequences in the regions of bacterial DNA coding for the 5S-16S-23S (the Escherichia coli rrnB rRNA operon) rRNA operon. The probes have been developed that are directed to highly conserved regions of the rRNA operon present in all eubacteria and can therefore be used for ribotyping most bacteria",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100711,nitrite measurement characterization tag,nitrite measurement characterization data tag,A chemical characterization data tag which indicates the presence of data that descibes a measurement of nitrite.,FALSE,,,,,,,nitrite measurement,,,,,,,Example Guidance: Use this tag to indicate additional data is available that provides characterization information from the quantitative measurement of the amount of nitrite present in a sample.,,,,,,,,,,,"http://purl.obolibrary.org/obo/NCIT:C64810 used as a partial source for the ""Example Guidance"".",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,nitrite measurement characterization data tag,,,,GENEPIO:0100711,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-5275-8866,2023-05-18T19:08:34.869Z,,,,,,,,,,,,,,,,,,,nitrite measurement characterization tag,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A chemical characterization data tag which indicates the presence of data that descibes a measurement of nitrite.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_47880,steroid ester,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:26762,,,,,,CHEBI:47880,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,steroid ester,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510175,egg free claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0175,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510175,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,egg free claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530021,chuck,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0021,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530021,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,chuck,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100235,other exposure setting exposure process,,A process occuring that exposes the recipient organism to a material entity.,FALSE,,,,,,,Other Exposure Setting,,,,,,,,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100235,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,other exposure setting exposure process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A process occuring that exposes the recipient organism to a material entity.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490394,metallized polyester container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0394,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490394,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,metallized polyester container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0003387,Illumina NextSeq 550,,"A DNA sequencer manufactured by the Illumina corporation, which provides the increased flexibility of microarray scanning in addition to sequencing.",FALSE,,,,,,,,,,,,,,,,,,,,,https://www.illumina.com/systems/sequencing-platforms/nextseq.html,,,,,NextSeq 550,,,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0003387,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Illumina NextSeq 550,,,,,,,,,,,,,,,,,,,,,,,,,,,,Suvarna Nadendla|Michelle Giglio|Jain Aluvathingal,,,https://github.com/obi-ontology/obi/issues/1546,"A DNA sequencer manufactured by the Illumina corporation, which provides the increased flexibility of microarray scanning in addition to sequencing.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020979,beef chop,,"A retail cut of meat from a beef that is perpendicular to the spine, and usually containing a rib or riblet part of a vertebra.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020979,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef chop,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A retail cut of meat from a beef that is perpendicular to the spine, and usually containing a rib or riblet part of a vertebra.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_0081006,dill allergy,,A food allergy triggered by dill (Anethum graveolens).,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0081006,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,dill allergy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A food allergy triggered by dill (Anethum graveolens).,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0081005,parsley allergy,,A vegetable allergy triggered by parsley (Petroselinum).,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0081005,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,parsley allergy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A vegetable allergy triggered by parsley (Petroselinum).,,,,,,,,
http://purl.obolibrary.org/obo/HP_6000319,Meteorism,,An increase in the gas content inside the bowel associated with distension of the abdomen and hydroaeric noises. The most common symptom of meteorism is a bloated sensation. It may be associated with abdominal discomfort. Some individuals may also complain of a distended stomach and excessive belching and/or passage of flatus.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:6000319,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Meteorism,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An increase in the gas content inside the bowel associated with distension of the abdomen and hydroaeric noises. The most common symptom of meteorism is a bloated sensation. It may be associated with abdominal discomfort. Some individuals may also complain of a distended stomach and excessive belching and/or passage of flatus.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020868,bison roast (boneless),,A boneless bison roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020868,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,bison roast (boneless),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A boneless bison roast.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001921,sequencing instrument model,,A product name and model number of a manufacturer's genomic (dna) sequencer.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001921,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,sequencing instrument model,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A product name and model number of a manufacturer's genomic (dna) sequencer.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530046,side (meat cut),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0046,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530046,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,side (meat cut),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002006,draft isolate whole genome sequencing model,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002006,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,draft isolate whole genome sequencing model,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00002886,synbiotic claim,,Synbiotic claim refers to food ingredients or dietary supplements combining probiotics and prebiotics in a form of synergism that beneficially affect the host.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00002886,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,synbiotic claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Synbiotic claim refers to food ingredients or dietary supplements combining probiotics and prebiotics in a form of synergism that beneficially affect the host.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_157175,enoxacin,,"A 1,8-naphthyridine derivative that is 1,4-dihydro-1,8-naphthyridine with an ethyl group at the 1 position, a carboxy group at the 3-position, an oxo sustituent at the 4-position, a fluoro substituent at the 5-position and a piperazin-1-yl group at the 7 position. An antibacterial, it is used in the treatment of urinary-tract infections and gonorrhoea.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:4796,,,,,,CHEBI:157175,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,enoxacin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A 1,8-naphthyridine derivative that is 1,4-dihydro-1,8-naphthyridine with an ethyl group at the 1 position, a carboxy group at the 3-position, an oxo sustituent at the 4-position, a fluoro substituent at the 5-position and a piperazin-1-yl group at the 7 position. An antibacterial, it is used in the treatment of urinary-tract infections and gonorrhoea.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000400,elk eye of round roast (raw),,A raw elk eye of round roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000400,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,elk eye of round roast (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw elk eye of round roast.,,,,,,,,
http://purl.obolibrary.org/obo/IDO_0000415,pathogen host role,,A host role borne by an organism in virtue of the fact that its extended organism contains a pathogen.,FALSE,,,,,,,,,,,,,,"Bearing the infectious agent host role implies bearing the pathogen host role, but the reverse is not true.  See comment for infectious agent host role.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,IDO:0000415,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ido.owl,,,,,,,,,pathogen host role,,,,,,,,,,,,,,,,,,,,,,,,,,,,Lindsay Cowell|Alexander Diehl|Albert Goldfain,,,,A host role borne by an organism in virtue of the fact that its extended organism contains a pathogen.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C74723,Turbidity Measurement,Turbidity Measurement|Turbidity|TURB,The determination of the opacity of a sample.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Turbidity Measurement|Turbidity|TURB,,,,NCIT:C74723,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Turbidity Measurement,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The determination of the opacity of a sample.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02010312,animal roast,,A retail cut of meat from an animal that is of a size for slicing into more than one portion and is suitable for roasting.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02010312,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,animal roast,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A retail cut of meat from an animal that is of a size for slicing into more than one portion and is suitable for roasting.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C114551,Organization Role,Organization Role,"A title that describes the function of a designated group, governing body, or institution.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Organization Role,,,,NCIT:C114551,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Organization Role,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A title that describes the function of a designated group, governing body, or institution.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0034923,disconnected anatomical group,,Material anatomical entity consisting of multiple anatomical structures that are not connected to each other.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0034923,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,disconnected anatomical group,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Material anatomical entity consisting of multiple anatomical structures that are not connected to each other.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0034920,infant stage,,Nursing stage that follows the neonate stage in mammals and ends at weaning.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SscrDv:0000085|RnorDv:0000057|MmusDv:0000177|MmulDv:0000053|MdomDv:0000033|HsapDv:0000261|ChirDv:0000022,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0034920,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,infant stage,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Nursing stage that follows the neonate stage in mammals and ends at weaning.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0034921,multi organ part structure,,An multicellular anatomical structure that has subparts of multiple organs as a part.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CARO:0020001,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0034921,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,multi organ part structure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An multicellular anatomical structure that has subparts of multiple organs as a part.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0034925,anatomical collection,,A collection of anatomical structures that are alike in terms of their morphology or developmental origin.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0034925,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,anatomical collection,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A collection of anatomical structures that are alike in terms of their morphology or developmental origin.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0034929,external soft tissue zone,,"A region or zone on the surface of an organism that encompasses skin and any adnexa, down through muscles and bounded by underlying skeletal support structures.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0034929,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,external soft tissue zone,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A region or zone on the surface of an organism that encompasses skin and any adnexa, down through muscles and bounded by underlying skeletal support structures.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_0050152,aspiration pneumonia,,A bacterial pneumonia which is an acute pulmonary inflammatory response that develops after the inhalation of colonized oropharyngeal material containing bacteria. It is seen in individuals with dysphagia and gastric dysmotility. The disease has_symptom tachypnea and has_symptom cough.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0050152,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,aspiration pneumonia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A bacterial pneumonia which is an acute pulmonary inflammatory response that develops after the inhalation of colonized oropharyngeal material containing bacteria. It is seen in individuals with dysphagia and gastric dysmotility. The disease has_symptom tachypnea and has_symptom cough.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0050150,Pontiac fever,,"A legionellosis that involves a milder respiratory illness without pneumonia. Symptoms include fever, headache and muscle aches which last for 2 to 5 days.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0050150,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,Pontiac fever,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A legionellosis that involves a milder respiratory illness without pneumonia. Symptoms include fever, headache and muscle aches which last for 2 to 5 days.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_0050155,sensory system disease,,"A nervous system disease which is located in a part of the nervous system responsible for processing sensory information that consists of sensory receptors, neural pathways, and parts of the brain involved in sensory perception. Commonly recognized sensory systems are those for vision, hearing, somatic sensation (touch), taste and olfaction (smell).",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0050155,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,sensory system disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A nervous system disease which is located in a part of the nervous system responsible for processing sensory information that consists of sensory receptors, neural pathways, and parts of the brain involved in sensory perception. Commonly recognized sensory systems are those for vision, hearing, somatic sensation (touch), taste and olfaction (smell).",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000071,beef shoulder clod arm roast,,The largest section of the shoulder clod that consist of the large muscle system of the thick end of the shoulder.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000071,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef shoulder clod arm roast,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The largest section of the shoulder clod that consist of the large muscle system of the thick end of the shoulder.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490179,"wood barrel, cask or wheel",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0179,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490179,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"wood barrel, cask or wheel",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001769,5 - non-contiguous finished,,Non-contiguous finished: which includes sequences that have been reviewed by both people and machines and would be considered complete except for “recalcitrant regions” that are proving problematic for genome closure.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001769,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,5 - non-contiguous finished,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,Non-contiguous finished: which includes sequences that have been reviewed by both people and machines and would be considered complete except for “recalcitrant regions” that are proving problematic for genome closure.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020257,piece of chicken breast (raw),,A raw piece of a chicken breast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020257,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of chicken breast (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw piece of a chicken breast.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100633,host vaccination field,host vaccination slot,A data field which describes the vaccination information of a host organism.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,(2026-02-28) Under review for deprecation.,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,host vaccination slot,,,,GENEPIO:0100633,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788,2022-12-22T00:55:53.808Z,,,,,,,,,,,,,,,,,,,host vaccination field,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the vaccination information of a host organism.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100830,percent ns across total genome length,percent Ns across total genome length,A data field which describes the percentage of the assembly that consists of ambiguous bases (Ns).,FALSE,,,,,,,PCDS:percent_ns_across_total_genome_length,,,,,,,PCDS: Provide a numerical value (no need to include units).,,,,,,,,,,,,,,PCDS: 2,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,percent Ns across total genome length,percent Ns across total genome length slot,,,,GENEPIO:0100830,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,percent ns across total genome length,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the percentage of the assembly that consists of ambiguous bases (Ns).,,PCDS: The percentage of the assembly that consists of ambiguous bases (Ns).,,,,,,
http://purl.obolibrary.org/obo/UBERON_0002050,embryonic structure,embryonic anatomical structure|developing embryonic structure,Anatomical structure that is part of an embryo.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ZFA:0001105|XAO:0003042|VSAO:0000178|UMLS:C0013948|TAO:0001105|SCTID:667009|RETIRED_EHDAA2:0003169|NCIT:C13229|MESH:D004628|GAID:407|FMA:69067|FBbt:00004208|EFO:0000461|CALOHA:TS-2110|BTO:0000174|BILA:0000034|AAO:0000138,,,,,,,,,,,,,,,,,,,,,,,,,embryonic anatomical structure|developing embryonic structure,,,,UBERON:0002050,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,embryonic structure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Anatomical structure that is part of an embryo.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100026,collection cup,,A device which is used to collect liquid samples.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100026,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,collection cup,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A device which is used to collect liquid samples.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001639,antigenic formula,,"An antigenic formula is a string composed of codes representing categorized results of tests performed on various viral, bacterial or immune cell surface antigens.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001639,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/NCIT_C53471|http://purl.obolibrary.org/obo/CHEBI_59132,,,,,,antigenic formula,,,,,,,,,,,,,,,,,,,,,,http://medical-dictionary.thefreedictionary.com/antigen,,,,,,Damion Dooley,,,,"An antigenic formula is a string composed of codes representing categorized results of tests performed on various viral, bacterial or immune cell surface antigens.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_29630,methymycin,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:29630,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,methymycin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001091,methadone use status,,"",FALSE,,,,,,,,,,,,,,,,,,,,,"",,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001091,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,methadone use status,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001734,avian - domesticated,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001734,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,avian - domesticated,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C25193,Occupation,occupation_type|occupation type|Type of Work|Occupation Type|Occupation|OCCUPATION|Job|Employment Category|Employee Job|EMPJOB,The principal activity that a person does to earn money.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,occupation_type|occupation type|Type of Work|Occupation Type|Occupation|OCCUPATION|Job|Employment Category|Employee Job|EMPJOB,,,,NCIT:C25193,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Occupation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The principal activity that a person does to earn money.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002228,critical health status,grave,"An organism datum about subject health status in which vital signs are unstable and not within normal limits, patient may be unconscious and indicators are unfavorable.",FALSE,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0001846,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,grave,,,,,GENEPIO:0002228,,,,,,,,,,,,,,2019-11-19T22:17:43Z,,,,,,,,,,,,,,,,,,,critical health status,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://orcid.org/0000-0002-8844-9165,,,,"An organism datum about subject health status in which vital signs are unstable and not within normal limits, patient may be unconscious and indicators are unfavorable.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03460230,single component food fermentation,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=H0230,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03460230,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,single component food fermentation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://www.ebi.ac.uk/efo/EFO_0002090,technical replicate,technical_replicate,A technical replicate is a replicate role where the same BioSample is use e.g. the same pool of RNA used to assess technical (as opposed to biological) variation within an experiment.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MO:641,,,,,,,,,,,,,,,,,,,,,,,,,technical_replicate,,,,efo:EFO_0002090,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,technical replicate,,,,,,,,,,,,,,,,,,,,,,,,,,,,James Malone,,,,A technical replicate is a replicate role where the same BioSample is use e.g. the same pool of RNA used to assess technical (as opposed to biological) variation within an experiment.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510244,omega-3 fatty acids claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0244,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510244,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,omega-3 fatty acids claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0001474,bone element,bone organ,Skeletal element that is composed of bone tissue.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:Bone|ZFA:0001514|XAO:0000169|Wikipedia:Bone|VSAO:0000057|VHOG:0001190|UMLS:C0262950|TAO:0001514|SCTID:90780006|NCIT:C12366|MIAA:0000299|MAT:0000299|MA:0001459|GAID:92|FMA:5018|FMA:30317|EV:0100140|ENVO:00002039|EMAPA:32782|EHDAA2:0003082|EFO:0000298|CALOHA:TS-0088|BTO:0000140|AEO:0000082|AAO:0000047,,,,,,,,,,,,,,,,,,,,,,,,,bone organ,,,,UBERON:0001474,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,bone element,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Skeletal element that is composed of bone tissue.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000307,New York chop (boneless),,A boneless pork chop that is derived from the center-cut top loin.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000307,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,New York chop (boneless),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A boneless pork chop that is derived from the center-cut top loin.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100222,mosque exposure process,,A process occuring within or in the vicinity of a mosque that exposes the recipient organism to a material entity.,FALSE,,,,,,,Mosque,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100222,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,mosque exposure process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A process occuring within or in the vicinity of a mosque that exposes the recipient organism to a material entity.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_14559,anaerobic meningitis,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:14559,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,anaerobic meningitis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000361,"veal breast (boneless, raw)",,A raw and boneless veal breast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000361,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"veal breast (boneless, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw and boneless veal breast.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00001264,Bermuda,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,INSDC:country:bermuda,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00001264,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Bermuda,http://purl.obolibrary.org/obo/GAZ_00146414,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_22727,benzopyran,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:22727,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,benzopyran,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530137,gite arriere,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0137,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530137,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,gite arriere,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_35701,ester,,"A compound formally derived from an oxoacid R<small><sub><em>k</em></sub></small>E(=O)<small><sub><em>l</em></sub></small>(OH)<small><sub><em>m</em></sub></small> (<em>l</em> > 0) and an alcohol, phenol, heteroarenol, or enol by linking with formal loss of water from an acidic hydroxy group of the former and a hydroxy group of the latter.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:4859|CHEBI:23960,,,,,,CHEBI:35701,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,ester,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A compound formally derived from an oxoacid R<small><sub><em>k</em></sub></small>E(=O)<small><sub><em>l</em></sub></small>(OH)<small><sub><em>m</em></sub></small> (<em>l</em> > 0) and an alcohol, phenol, heteroarenol, or enol by linking with formal loss of water from an acidic hydroxy group of the former and a hydroxy group of the latter.",,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0508,Liberian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0508,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Liberian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0502,Vietnamese,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0502,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Vietnamese,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0500,Thai,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0500,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Thai,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0507,Kenyan,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0507,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Kenyan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0506,Ethiopian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0506,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Ethiopian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0503,Cameroonian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0503,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Cameroonian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0504,Cape Verdean,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0504,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Cape Verdean,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0501,Timorese,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0501,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Timorese,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0505,Chadian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0505,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Chadian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002043,obsolete: sensitive - dose dependent,,Susceptible - dose dependent indicates that an isolate is observed to offer resistance to a given antibiotic when a sufficient dose is given.,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002043,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: sensitive - dose dependent,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,http://purl.obolibrary.org/obo/NCIT_C85559,,,Susceptible - dose dependent indicates that an isolate is observed to offer resistance to a given antibiotic when a sufficient dose is given.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002172,URL specification,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002172,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,URL specification,,,,,,,,,,,,,,,,,,,,,,,,http://semanticscience.org/resource/SIO_000811,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C28293,Outpatient,outpatient|Outpatient,A patient who comes to a healthcare facility for diagnosis or treatment but is not admitted for an overnight stay.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,outpatient|Outpatient,,,,NCIT:C28293,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Outpatient,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A patient who comes to a healthcare facility for diagnosis or treatment but is not admitted for an overnight stay.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510254,senior as food consumer,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0254,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510254,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,senior as food consumer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/OBA_2001001,age of onset of asthma,age at onset of asthma|age asthma symptoms begin,The age at which asthma manifestations first appear.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,age at onset of asthma|age asthma symptoms begin,,,,OBA:2001001,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age of onset of asthma,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The age at which asthma manifestations first appear.,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_2697049,Severe acute respiratory syndrome coronavirus 2,,,FALSE,,,,,,,SARS2|SARS-CoV2|SARS-2|Human coronavirus 2019|HCoV-19|COVID-19 virus|2019-nCoV,,,,,,,,,,,,,,,,,,,Severe acute respiratory syndrome coronavirus 2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:2697049,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Severe acute respiratory syndrome coronavirus 2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000139,food cultural origin,,A food cultural origin datum indicates the cultural origin of a food product.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000139,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,food cultural origin,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A food cultural origin datum indicates the cultural origin of a food product.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490298,aluminum combined with paper and plastic,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0298,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490298,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,aluminum combined with paper and plastic,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490227,"one component adhesive, organic solvent",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0227,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490227,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"one component adhesive, organic solvent",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0004185,endodermal part of digestive tract,gut endoderm|endodermal gut,A portions of the gut that is derived from endoderm.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,EMAPA:32930,,,,,,,,,,,,,,,,,,,,,,,,,gut endoderm|endodermal gut,,,,UBERON:0004185,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,endodermal part of digestive tract,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A portions of the gut that is derived from endoderm.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C202048,Patient Dead,Patient Died|Patient Dead,An indication that a patient has died.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Patient Died|Patient Dead,,,,NCIT:C202048,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Patient Dead,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An indication that a patient has died.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00000448,geographic location,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00000448,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,geographic location,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01001406,laboratory facility,research laboratory,"A research facility in which systems of manufactured products control internal conditions and in which scientific or technological research, experiments, and measurement may be performed.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,research laboratory,,,,ENVO:01001406,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,laboratory facility,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A research facility in which systems of manufactured products control internal conditions and in which scientific or technological research, experiments, and measurement may be performed.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102209,Digital real time polymerase chain reaction (dPCR),,"A polymerase chain reaction assay in which a sample is partitioned into many individual reactions, such that target nucleic acid molecules are distributed across partitions and amplified independently, enabling absolute quantification of target sequences based on the proportion of positive reactions, with optional real-time fluorescence monitoring.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102209,,,,,,,,,,,,,,2026-04-13T19:52:38.515Z,,,,,,,,,,,,,,,,,,,Digital real time polymerase chain reaction (dPCR),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A polymerase chain reaction assay in which a sample is partitioned into many individual reactions, such that target nucleic acid molecules are distributed across partitions and amplified independently, enabling absolute quantification of target sequences based on the proportion of positive reactions, with optional real-time fluorescence monitoring.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000134,specimen source substance,,A specimen source substance is an organism substance or food product or environmental substance from which the specimen was extracted.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000134,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,specimen source substance,http://purl.obolibrary.org/obo/GENEPIO_0002167,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A specimen source substance is an organism substance or food product or environmental substance from which the specimen was extracted.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001590,"environmental, food or other pathogen",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI:Pathogen.env|GSCID-BRC:environmental/food/other,,,,,,GENEPIO:0001590,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"environmental, food or other pathogen",,,http://purl.obolibrary.org/obo/GENEPIO_0001835|http://purl.obolibrary.org/obo/GENEPIO_0000002,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0002371,bone marrow,medulla ossium|medulla ossea,The soft tissue that fills the cavities of bones.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:BoneMarrow|XAO:0000123|Wikipedia:Bone_marrow|VHOG:0001218|UMLS:C0005953|SCTID:421320006|NCIT:C12431|MIAA:0000084|MESH:D001853|MAT:0000084|MA:0000134|GAID:1287|FMA:9608|EV:0100046|EMAPA:32760|EFO:0000868|CALOHA:TS-0087|BTO:0000829|BTO:0000141|AAO:0011007,,,,,,,,,,,,,,,,,,,,,,,,,medulla ossium|medulla ossea,,,,UBERON:0002371,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,bone marrow,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The soft tissue that fills the cavities of bones.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100449,sample storage medium,sample_storage_method|sample storage method,A data field which describes the material or matrix in which a sample is stored.,FALSE,,,,,,,PCDS:sample_storage_medium,,,,,,,PCDS: Provide a description of the medium in which the sample was stored.,,,,,,,,,,,,,,PCDS: PBS + 20% glycerol,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,sample_storage_method|sample storage method,sample storage method slot,,,,GENEPIO:0100449,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,sample storage medium,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the material or matrix in which a sample is stored.,,PCDS: The medium in which a sample is stored.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0004513,feces (fresh),,Feces that was recently excreted.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0004513,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-5275-8866,2023-11-28T14:28:34Z,,,,,,,,,,,,,,,,,,,feces (fresh),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Feces that was recently excreted.,,,,,,,,
http://purl.obolibrary.org/obo/PECO_0007027,seasonal environment exposure,seasonal environment treatment (narrow),A plant exposure (PECO:0001001) involving growth during conditions of regional seasons.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PECO_GIT:83,,,,,,,,,,,,,,,,,,,,,,,EO:0007027,,,seasonal environment treatment (narrow),,,PECO:0007027,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/peco.owl,,,,,,,,,seasonal environment exposure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A plant exposure (PECO:0001001) involving growth during conditions of regional seasons.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001584,multispecies sample scope,,A multi-species sample scope involves a sample representing multiple species.,FALSE,,,,,,,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/books/NBK54364/,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001584,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,multispecies sample scope,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A multi-species sample scope involves a sample representing multiple species.,,,,multispecies,,,,
http://purl.obolibrary.org/obo/UO_0000101,microliter,ul|microlitre,A volume unit which is equal to one millionth of a liter or 10^[-6] L.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ul|microlitre,,,,UO:0000101,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,microliter,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A volume unit which is equal to one millionth of a liter or 10^[-6] L.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000103,picoliter,pl|picolitre,A volume unit which is equal to 10^[-12] L.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,pl|picolitre,,,,UO:0000103,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,picoliter,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A volume unit which is equal to 10^[-12] L.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000102,nanoliter,nl|nanolitre,A volume unit which is equal to one thousandth of one millionth of a liter or 10^[-9] L.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,nl|nanolitre,,,,UO:0000102,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,nanoliter,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A volume unit which is equal to one thousandth of one millionth of a liter or 10^[-9] L.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000100,cubic decimeter,dm^[3]|cubic decimetre,"A volume unit which is equal to one thousand of a cubic meter or 10^[-3] m^[3], or to 1 L.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,dm^[3]|cubic decimetre,,,,UO:0000100,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,cubic decimeter,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A volume unit which is equal to one thousand of a cubic meter or 10^[-3] m^[3], or to 1 L.",,,,,,,,
http://purl.obolibrary.org/obo/UO_0000104,femtoliter,fl|femtolitre,A volume unit which is equal to 10^[-15] L.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,fl|femtolitre,,,,UO:0000104,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,femtoliter,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A volume unit which is equal to 10^[-15] L.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510088,naturally sodium-free food,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0088,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510088,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,naturally sodium-free food,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020468,"piece of turkey meat (with skin, raw)",,A raw piece of turkey meat that contains skin.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020468,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"piece of turkey meat (with skin, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw piece of turkey meat that contains skin.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_11101,trench fever,,"A primary bacterial infectious disease that results in systemic infection, has_material_basis_in Bartonella quintana, which is transmitted by body lice (Pediculus humanus corporis). The infection has symptom relapsing fever, has symptom headache, has symptom shin pain, and has symptom soreness of the muscles of the legs and back.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:11101,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,trench fever,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A primary bacterial infectious disease that results in systemic infection, has_material_basis_in Bartonella quintana, which is transmitted by body lice (Pediculus humanus corporis). The infection has symptom relapsing fever, has symptom headache, has symptom shin pain, and has symptom soreness of the muscles of the legs and back.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_11103,rickettsialpox,,"A spotted fever that has_material_basis_in Rickettsia akari, which is transmitted_by house mouse mite (Liponyssoides sanguineus) found on mice and other rodents. The infection has_symptom fever, has_symptom chills, has_symptom headache, has_symptom myalgia, and has_symptom papulovesicular rash.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:11103,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,rickettsialpox,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A spotted fever that has_material_basis_in Rickettsia akari, which is transmitted_by house mouse mite (Liponyssoides sanguineus) found on mice and other rodents. The infection has_symptom fever, has_symptom chills, has_symptom headache, has_symptom myalgia, and has_symptom papulovesicular rash.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_11100,Q fever,,"A primary bacterial infectious disease that is a zoonotic infectious disease affecting multiple organs, has_material_basis_in Coxiella burnetii, which is transmitted_by inhalation of air contaminated by barnyard dust containing dried placental material, birth fluids, or excreta of infected herd animals, transmitted_by ingestion of contaminated milk, transmitted_by tick bites and transmitted_by contact with infected person. The infection has_symptom fever, has_symptom headache, has_symptom cough, has_symptom pleuritic chest pain, has_symptom myalgia and has_symptom arthralgia.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:11100,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,Q fever,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A primary bacterial infectious disease that is a zoonotic infectious disease affecting multiple organs, has_material_basis_in Coxiella burnetii, which is transmitted_by inhalation of air contaminated by barnyard dust containing dried placental material, birth fluids, or excreta of infected herd animals, transmitted_by ingestion of contaminated milk, transmitted_by tick bites and transmitted_by contact with infected person. The infection has_symptom fever, has_symptom headache, has_symptom cough, has_symptom pleuritic chest pain, has_symptom myalgia and has_symptom arthralgia.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_11102,bartonellosis,,A primary bacterial infectious disease that is caused by the bacteria of the genus Bartonella.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:11102,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,bartonellosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A primary bacterial infectious disease that is caused by the bacteria of the genus Bartonella.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_11104,spotted fever,,"A primary bacterial infectious disease that results in infection, located in endothelial cell of artery or located in endothelial cell of vein, has_material_basis_in Rickettsia, which is transmitted by ticks and mites. The infection has symptom fever, has symptom headache, has symptom fatigue, has symptom muscle aches, and has symptom maculopapular or petechial rash. A distinctive eschar (blackened or crusted skin) may develop at the site of a tick bite.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:11104,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,spotted fever,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A primary bacterial infectious disease that results in infection, located in endothelial cell of artery or located in endothelial cell of vein, has_material_basis_in Rickettsia, which is transmitted by ticks and mites. The infection has symptom fever, has symptom headache, has symptom fatigue, has symptom muscle aches, and has symptom maculopapular or petechial rash. A distinctive eschar (blackened or crusted skin) may develop at the site of a tick bite.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001668,not provided,,A categorical choice indicating that information of an expected format was not given a value may be given at the later stage.,FALSE,,,,,,,,,,,,,,,,,,,,,https://ena-docs.readthedocs.io/en/latest/submit/samples/missing-values.html,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0001666,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001668,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,not provided,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,INSDC term (lower level),,A categorical choice indicating that information of an expected format was not given a value may be given at the later stage.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C191465,Death due to Other Cardiovascular Cause Related to COVID-19,Death due to other cardiovascular causes|Death due to Other Cardiovascular Cause Related to COVID-19,"Death from a cardiovascular cause not otherwise noted but with a specific, known cause in a patient with probable or confirmed acute COVID-19.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Death due to other cardiovascular causes|Death due to Other Cardiovascular Cause Related to COVID-19,,,,NCIT:C191465,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Death due to Other Cardiovascular Cause Related to COVID-19,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Death from a cardiovascular cause not otherwise noted but with a specific, known cause in a patient with probable or confirmed acute COVID-19.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C191463,Death due to Cardiovascular Hemorrhage Related to COVID-19,Death due to cardiovascular hemorrhage|Death due to Cardiovascular Hemorrhage Related to COVID-19,"Death related to hemorrhage such as a non-stroke intracranial hemorrhage, non-procedural or non-traumatic vascular rupture, or hemorrhage causing cardiac tamponade in a patient with probable or confirmed acute COVID-19.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Death due to cardiovascular hemorrhage|Death due to Cardiovascular Hemorrhage Related to COVID-19,,,,NCIT:C191463,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Death due to Cardiovascular Hemorrhage Related to COVID-19,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Death related to hemorrhage such as a non-stroke intracranial hemorrhage, non-procedural or non-traumatic vascular rupture, or hemorrhage causing cardiac tamponade in a patient with probable or confirmed acute COVID-19.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C191464,Death due to Cardiovascular Procedure Related to COVID-19,Death due to cardiovascular procedure|Death due to Cardiovascular Procedure Related to COVID-19,Death caused by complications of a cardiovascular procedure in a patient with probable or confirmed acute COVID-19.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Death due to cardiovascular procedure|Death due to Cardiovascular Procedure Related to COVID-19,,,,NCIT:C191464,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Death due to Cardiovascular Procedure Related to COVID-19,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Death caused by complications of a cardiovascular procedure in a patient with probable or confirmed acute COVID-19.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_1022,pinta disease,,"A primary bacterial infectious disease that results_in infection located_in skin, has_material_basis_in Treponema carateum, which is transmitted_by contact with skin and mucous membrane of an infected person. The infection has_symptom pruritic plaque, which slowly enlarges and becomes pigmented and hyperkeratotic.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:1022,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,pinta disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A primary bacterial infectious disease that results_in infection located_in skin, has_material_basis_in Treponema carateum, which is transmitted_by contact with skin and mucous membrane of an infected person. The infection has_symptom pruritic plaque, which slowly enlarges and becomes pigmented and hyperkeratotic.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100770,environmental material properties field,environmental material properties,"A data field which describes the properties, characteristics and qualities of a substance obtained from an environment.",FALSE,,,,,,,PCDS:environmental_material_properties,,,,,,,PCDS: Provide the environmental material properties by selecting descriptors from the pick list.,,,,,,,,,,,,,,PCDS: Stagnant,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,environmental material properties,environmental_material_properties,,,,GENEPIO:0100770,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-21T01:14:47.111Z,,,,,,,,,,,,,,,,,,,environmental material properties field,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A data field which describes the properties, characteristics and qualities of a substance obtained from an environment.",,"PCDS: The properties, characteristics and qualities of a substance obtained from the natural or man-made environment.",,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001059,boat / cruise travel,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001059,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,boat / cruise travel,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100855,artic-v5.2.0_400 strategy,,An amplicon strategy which was developed by the ARTIC consortium for SARS-CoV-2 with the attributes of version 5.2.0 which produces amplicons approximately 400bp in length.,FALSE,,,,,,,artic-v5.2.0_400|artic v5.2.0_400,,,,,,,,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100855,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2026-04-13T19:52:38.515Z,,,,,,,,,,,,,,,,,,,artic-v5.2.0_400 strategy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An amplicon strategy which was developed by the ARTIC consortium for SARS-CoV-2 with the attributes of version 5.2.0 which produces amplicons approximately 400bp in length.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_70718,ceftaroline fosamil,,"A cephalosporin having [4-(1-methylpyridinium-4-yl)-1,3-thiazol-2-yl]sulfanyl and {(2<i>Z</i>)-2-(ethoxyimino)-2-[5-(phosphonoamino)-1,2,4-thiadiazol-3-yl]acetyl}amino side groups located at positions 3 and 7 respectively. The <em>N</em>-phospho prodrug of ceftaroline, a broad-spectrum antibiotic active against methicillin-resistant <em>Staphylococcus aureus</em> (MRSA). It is used for the treatment of adults with acute bacterial skin and skin structure infections.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:70718,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,ceftaroline fosamil,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A cephalosporin having [4-(1-methylpyridinium-4-yl)-1,3-thiazol-2-yl]sulfanyl and {(2<i>Z</i>)-2-(ethoxyimino)-2-[5-(phosphonoamino)-1,2,4-thiadiazol-3-yl]acetyl}amino side groups located at positions 3 and 7 respectively. The <em>N</em>-phospho prodrug of ceftaroline, a broad-spectrum antibiotic active against methicillin-resistant <em>Staphylococcus aureus</em> (MRSA). It is used for the treatment of adults with acute bacterial skin and skin structure infections.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100223,temple exposure process,,A process occuring within or in the vicinity of a temple that exposes the recipient organism to a material entity.,FALSE,,,,,,,Temple,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100223,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,temple exposure process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A process occuring within or in the vicinity of a temple that exposes the recipient organism to a material entity.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000122,"beef strip loin (bone-in, raw)",,A raw beef strip loin that contains bone.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000122,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"beef strip loin (bone-in, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef strip loin that contains bone.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100252,visitor role,,A role inhering in a person that is realized when the bearer pays a visit to a specific place or event.,FALSE,,,,,,,Visitor,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Resident,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100252,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,visitor role,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A role inhering in a person that is realized when the bearer pays a visit to a specific place or event.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00007698,"populated place, Iceland",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00007698,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Iceland",http://purl.obolibrary.org/obo/GAZ_00000843,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001245,patient specimen,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001245,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,patient specimen,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490397,polyethylene (high density) - polyester container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0397,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490397,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,polyethylene (high density) - polyester container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_33856,aromatic amino acid,,An amino acid whose structure includes an aromatic ring.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:2835|CHEBI:22623|CHEBI:13820,,,,,,CHEBI:33856,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,aromatic amino acid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An amino acid whose structure includes an aromatic ring.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C48519,Ounce,oz avdp|oz|ounce (US and British)|ounce|[oz_av]|[oz_ap]|Ounce|OZ|OUNCE|International Ounce|Avoirdupois Ounce,"The traditional unit of mass. The avoirdupois ounce is equal to 1/16 pound, or 28.3495 grams, or 0.911457 troy ounce.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,oz avdp|oz|ounce (US and British)|ounce|[oz_av]|[oz_ap]|Ounce|OZ|OUNCE|International Ounce|Avoirdupois Ounce,,,,NCIT:C48519,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Ounce,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The traditional unit of mass. The avoirdupois ounce is equal to 1/16 pound, or 28.3495 grams, or 0.911457 troy ounce.",,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000447,marine biome,,An aquatic biome which is determined by a marine water body.,FALSE,,,,,,,,,,,,,,"This biome includes open-ocean and unprotected coastal ecosystems, characterized by exposure to wave action, tidal fluctuation, and ocean currents as well as systems that largely resemble these. Water in the marine biome is generally within the salinity range of seawater: 30 to 38 ppt.",,,,,,,,,,,,,,,,,,SPIRE:Marine,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00000447,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,envoPolar,,,,,,,,marine biome,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An aquatic biome which is determined by a marine water body.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00010625,zoological garden,zoological park|zoo,"A facility in which animals are confined within enclosures and displayed to the public, and in which they may also be bred.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,zoological park|zoo,,,,ENVO:00010625,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,zoological garden,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A facility in which animals are confined within enclosures and displayed to the public, and in which they may also be bred.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02010213,piece of light animal meat (skinless),,A piece of skinless light animal meat.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02010213,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of light animal meat (skinless),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A piece of skinless light animal meat.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00013955,"populated place, Botswana",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00013955,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Botswana",http://purl.obolibrary.org/obo/GAZ_00001097,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470149,preservation by adding acid,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0149,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470149,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,preservation by adding acid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100950,automatic composite sampling device,,A composite sampler which is automated to collect multiple discrete samples over a defined period or condition and combine them into a single composite sample without manual intervention.,FALSE,,,,,,,automatic composite sampler,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100950,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-11-20T16:24:25Z,,,,,,,,,,,,,,,,,,,automatic composite sampling device,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A composite sampler which is automated to collect multiple discrete samples over a defined period or condition and combine them into a single composite sample without manual intervention.,,,,,,,,
http://purl.obolibrary.org/obo/COB_0000083,failed planned process,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,COB:0000083,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/cob.owl,,,,,,,,,failed planned process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002130,virulence factor name,,"The name of the virulence factor molecule produced by a pathogen that specifically causes disease, or that influences the host's function to allow the pathogen to thrive.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002130,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IDO_0000547,,,,,,virulence factor name,,,,,,,,,,,,,,,,,,,,,,,,,,,,Emma Griffiths,,,,"The name of the virulence factor molecule produced by a pathogen that specifically causes disease, or that influences the host's function to allow the pathogen to thrive.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100125,obsolete: Illumina MiSeq,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,Rehomed in OBI,,,,,,,,,,,,,,,,,,,GENEPIO:0100125,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: Illumina MiSeq,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/OBI_0002003,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00004495,"populated place, Iraq",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00004495,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Iraq",http://purl.obolibrary.org/obo/GAZ_00004483,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_35156,calcium salt,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:35156,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,calcium salt,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510027,pig as consumer,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0027,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510027,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pig as consumer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000300,Ovimbundu,,A Bantu Central population with a population size of 4.6 milions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000300,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Ovimbundu,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Bantu Central population with a population size of 4.6 milions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000307,Toubou,Umbararo|Tudaga|Tuda|Tubu|Todga|Todaga|Toda|Tibu|Tibbu|Tebu|Tebou|Tabu,"A Nilotic Eastern, Nilotic Western, Northern African, Nilotic Central population with a population size of 2.25 millions",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Umbararo|Tudaga|Tuda|Tubu|Todga|Todaga|Toda|Tibu|Tibbu|Tebu|Tebou|Tabu,,,,AfPO:0000307,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Toubou,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A Nilotic Eastern, Nilotic Western, Northern African, Nilotic Central population with a population size of 2.25 millions",,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000301,Mbunda,,A Kongo population with a population size of 0.5 million,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000301,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Mbunda,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Kongo population with a population size of 0.5 million,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000305,Baggara,,"A Semite Central, Semitic Eastern population with a population size of 6 million",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000305,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Baggara,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A Semite Central, Semitic Eastern population with a population size of 6 million",,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000302,Gbaya,,A Ubangi Central population with a population size of 1.5 million,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000302,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Gbaya,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Ubangi Central population with a population size of 1.5 million,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000303,Ngbandi,,A Ubangi Central population with a population size of 0.122 million,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000303,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Ngbandi,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Ubangi Central population with a population size of 0.122 million,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000304,Zande,,"A Ubangi Central, Eastern African population with a population size of 1-4 millions",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000304,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Zande,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A Ubangi Central, Eastern African population with a population size of 1-4 millions",,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000306,Sara,,"A Western African, Nilotic Central population with a population size of 3.5 millions",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000306,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Sara,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A Western African, Nilotic Central population with a population size of 3.5 millions",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020231,chicken breast (skinless),,A skinless chicken breast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020231,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,chicken breast (skinless),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A skinless chicken breast.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000275,lamb foreshank,,A minor lamb primal cut that is meat lower shank from front leg with no hock bones.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000275,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lamb foreshank,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A minor lamb primal cut that is meat lower shank from front leg with no hock bones.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102276,prior pathogen infection date,,A prior infection data field which describes the date of diagnosis of a prior pathogen infection.,FALSE,,,,,,,PCDS:prior_infection_date,,,,,,,PCDS: Provide the date that the most recent prior infection was diagnosed. Provide the date in ISO 8601 standard format 'YYYY-MM-DD'.,,,,,,,,,,,,,,PCDS: 2021-01-23,,,uncurated,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102276,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2026-04-09T18:02:29.914Z,,,,,,,,,,,,,,,,,,,prior pathogen infection date,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A prior infection data field which describes the date of diagnosis of a prior pathogen infection.,,PCDS: The date of diagnosis of the prior pathogen infection.,,,,,,
http://purl.obolibrary.org/obo/HP_0001397,Hepatic steatosis,Steatosis|Liver steatosis|Fatty liver|Fatty infiltration of liver,Steatosis is a term used to denote lipid accumulation within hepatocytes.,FALSE,,,,,,,,,,,,,,"Although steatosis is the hallmark of the fatty liver disease, it is not a specific feature because it can be seen as part of other disease processes, such as drug injury, Wilson disease, or hepatitis C virus infection (especially genotype-3). Involvement of less than 5% of the hepatocytes by steatosis is considered clinically insignificant and within reference range. Based on the morphologic appearance and the size of the lipid droplets within the cytoplasm of the hepatocytes, steatosis is characterized as macrovesicular or microvesicular. Macrovesicular steatosis is characterized by large lipid droplets occupying the cytoplasm, displacing the nucleus to the periphery (large droplet macrovesicular steatosis) or multiple small lipid droplets of variable size occupying the cytoplasm with the nucleus maintaining its central location (small droplet macrovesicular steatosis). Microvesicular steatosis is characterized by innumerable tiny, relatively uniform lipid vacuoles that result in a bubbly appearance of the hepatocytes.",,,,,,,,,,,,,,,,,,UMLS:C2711227|SNOMEDCT_US:442191002|SNOMEDCT_US:197321007,,,,,,,,,,,,,,,,,,,,,,,HP:0200121|HP:0002252,,Steatosis|Liver steatosis|Fatty liver|Fatty infiltration of liver,,,,HP:0001397,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Hepatic steatosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Steatosis is a term used to denote lipid accumulation within hepatocytes.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0001392,Abnormality of the liver,Liver abnormality|Abnormality of the liver|Abnormal liver,An abnormality of the liver.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4021780|UMLS:C0023895|SNOMEDCT_US:235856003,,,,,,,,,,,,,,,,,,,,,,,,,Liver abnormality|Abnormality of the liver|Abnormal liver,,,,HP:0001392,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormality of the liver,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An abnormality of the liver.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000310,"New York roast (boneless, raw)",,A raw New York roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000310,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"New York roast (boneless, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw New York roast.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001915,thousands,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001915,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0001914,,,,,,,,,,,thousands,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0101104,diagnostic testing threshold value,,,FALSE,,,,,,,PCDS:diagnostic_testing_threshold_value,,,,,,,,,,,,,,,,,,,,,,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0101104,,,,,,,,,,,,,,2026-04-13T17:18:02.461Z,,,,,,,,,,,,,,,,,,,diagnostic testing threshold value,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PCDS: The numerical value which represents the threshold above/below which interpretation can be drawn on the diagnostic test,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100849,artic-v3 strategy,,An amplicon strategy which was developed by the ARTIC consortium for SARS-CoV-2 with the attributes of version 3.0.0.,FALSE,,,,,,,artic-v3|artic v3,,,,,,,,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100849,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2026-04-13T19:52:38.515Z,,,,,,,,,,,,,,,,,,,artic-v3 strategy,,,,,,,,,,,,,,,,,,,,,,https://www.protocols.io/view/ncov-2019-sequencing-protocol-v3-locost-bp2l6n26rgqe/v3,,,,,,,,,,An amplicon strategy which was developed by the ARTIC consortium for SARS-CoV-2 with the attributes of version 3.0.0.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001053,agricultural fair,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001053,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,agricultural fair,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100722,phage type identification tag,phage type data type,A microbiological characterization data tag which indicates the presence of microbiological identification data derived using phage type identification.,FALSE,,,,,,,phage type,,,,,,,Example Guidance: Use this tag to indicate additional data is available that provides identification information from phage typing.,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,phage type data type,,,,GENEPIO:0100722,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-05-18T19:08:34.869Z,,,,,,,,,,,,,,,,,,,phage type identification tag,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A microbiological characterization data tag which indicates the presence of microbiological identification data derived using phage type identification.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00005453,"populated place, Malaysia",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00005453,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Malaysia",http://purl.obolibrary.org/obo/GAZ_00003902,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00005458,"populated place, Mali",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00005458,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Mali",http://purl.obolibrary.org/obo/GAZ_00000584,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0001255,urinary bladder,bladder,Distensible musculomembranous organ situated in the anterior part of the pelvic cavity in which urine collects before excretion[MP].,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:UrinaryBladder|XAO:0000154|Wikipedia:Urinary_bladder|VHOG:0000740|UMLS:C0005682|SCTID:302512001|NCIT:C12414|MIAA:0000122|MESH:D001743|MAT:0000122|MA:0000380|GAID:0000004|FMA:15900|EV:0100098|EMAPA:18321|EHDAA:9328|EHDAA2:0000174|EFO:0000290|CALOHA:TS-1090|BTO:0001418|AAO:0000623,,,,,,,,,,,,,,,,,,,,,,,,bladder,vesica urinaria,,,,UBERON:0001255,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,urinary bladder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Distensible musculomembranous organ situated in the anterior part of the pelvic cavity in which urine collects before excretion[MP].,,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000254,allele frequency,,"The allele frequency is a data item which denotes the incidence of a gene variant in a population. It is calculated as a ratio, by dividing the number of copies of a particular allele by the number of copies of all alleles at the genetic place (locus) in a population.",FALSE,,,,,,,,,,,,,,,,,,,,,http://www.nature.com/scitable/definition/allele-frequency-298,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000254,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,allele frequency,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra|Orlaith Burke|Alejandra Gonzalez-Beltran,,,,"The allele frequency is a data item which denotes the incidence of a gene variant in a population. It is calculated as a ratio, by dividing the number of copies of a particular allele by the number of copies of all alleles at the genetic place (locus) in a population.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100825,sequence assembly software name,assembly software name,A data field which describes the name of the software used to assemble a sequence.,FALSE,,,,,,,PCDS:sequence_assembly_software_name,,,,,,,PCDS: Provide the name of the software used to assemble the sequence.,,,,,,,,,,,,,,"PCDS: SPAdes Genome Assembler, Canu, wtdbg2, velvet",,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,assembly software name,,,,GENEPIO:0100825,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,sequence assembly software name,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the name of the software used to assemble a sequence.,,PCDS: The name of the software used to assemble a sequence.,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020175,"piece of chicken (skinless, raw)",,A raw skinless piece of chicken.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020175,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"piece of chicken (skinless, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw skinless piece of chicken.,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0021223,digestive system neoplasm,tumour of the gastrointestinal system|tumour of the digestive system|tumour of the GI system|tumour of gastrointestinal system|tumour of digestive system|tumour of GI system|tumor of the gastrointestinal system|tumor of the digestive system|tumor of the GI system|tumor of gastrointestinal system|tumor of digestive system|tumor of GI system|neoplasm of the gastrointestinal system|neoplasm of the digestive system|neoplasm of the GI system|neoplasm of gastrointestinal system|neoplasm of digestive system|neoplasm of GI system|gastrointestinal tumour|gastrointestinal tumor|gastrointestinal system tumour|gastrointestinal system tumor|gastrointestinal system neoplasm|gastrointestinal neoplasm|digestive tumour|digestive tumor|digestive system tumour|digestive system tumor|digestive system neoplasm (disease)|digestive neoplasm|GI tumour|GI tumor|GI system tumour|GI system tumor|GI system neoplasm|GI neoplasm,A neoplasm (disease) that involves the digestive system.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0012243|NCIT:C3052|MESH:D005770|MEDGEN:8398|EFO:0008549,,,,,,,,,,,,,,,,,,,,,,,,,tumour of the gastrointestinal system|tumour of the digestive system|tumour of the GI system|tumour of gastrointestinal system|tumour of digestive system|tumour of GI system|tumor of the gastrointestinal system|tumor of the digestive system|tumor of the GI system|tumor of gastrointestinal system|tumor of digestive system|tumor of GI system|neoplasm of the gastrointestinal system|neoplasm of the digestive system|neoplasm of the GI system|neoplasm of gastrointestinal system|neoplasm of digestive system|neoplasm of GI system|gastrointestinal tumour|gastrointestinal tumor|gastrointestinal system tumour|gastrointestinal system tumor|gastrointestinal system neoplasm|gastrointestinal neoplasm|digestive tumour|digestive tumor|digestive system tumour|digestive system tumor|digestive system neoplasm (disease)|digestive neoplasm|GI tumour|GI tumor|GI system tumour|GI system tumor|GI system neoplasm|GI neoplasm,,,,MONDO:0021223,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,digestive system neoplasm,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A neoplasm (disease) that involves the digestive system.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_35790,oxazole,,An azole based on a five-membered heterocyclic aromatic skeleton containing one N and one O atom.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:35790,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,oxazole,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An azole based on a five-membered heterocyclic aromatic skeleton containing one N and one O atom.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C14139,Immunocompromised,immunocompromised|Immunosuppressed Patient|Immunosuppressed Host|Immunosuppressed|Immunocompromised Patient|Immunocompromised Host|Immunocompromised,"A loss of any arm of immune functions, resulting in potential or actual increase in infections. This state may be reached secondary to specific genetic lesions, syndromes with unidentified or polygenic causes, acquired deficits from other disease states, or as result of therapy for other diseases or conditions.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,immunocompromised|Immunosuppressed Patient|Immunosuppressed Host|Immunosuppressed|Immunocompromised Patient|Immunocompromised Host|Immunocompromised,,,,NCIT:C14139,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Immunocompromised,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A loss of any arm of immune functions, resulting in potential or actual increase in infections. This state may be reached secondary to specific genetic lesions, syndromes with unidentified or polygenic causes, acquired deficits from other disease states, or as result of therapy for other diseases or conditions.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C25269,Symptomatic,symptomatic|Symptomatic|SYMPTOMS|Is_Symptomatic|Currently has symptoms,Exhibiting the symptoms of a particular disease.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,symptomatic|Symptomatic|SYMPTOMS|Is_Symptomatic|Currently has symptoms,,,,NCIT:C25269,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Symptomatic,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Exhibiting the symptoms of a particular disease.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03450047,pressure frying process,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=G0047,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03450047,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pressure frying process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03500048,leaf food contact surface,,A plant leaf used as a food contact surface.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=N0048,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03500048,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,leaf food contact surface,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A plant leaf used as a food contact surface.,,,,,,,,
http://www.ebi.ac.uk/efo/EFO_0000689,sampling time,sampling_time_point,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MO:866,,,,,,,,,,,,,,,,,,,,,,,,,sampling_time_point,,,,efo:EFO_0000689,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,sampling time,,,,,,,,,,,,,,,,,,,,,,,,,,,,Tomasz Adamusiak|Jie Zheng|James Malone,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02010158,piece of animal breast,,A piece of an animal breast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02010158,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of animal breast,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A piece of an animal breast.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100745,mollusc shell length tag,mollusc shell length data type,A physical characterization data tag which indicates the presence of data that describes the length of a mollusc shell.,FALSE,,,,,,,mollusc shell length,,,,,,,"Example Guidance: Use this tag to indicate additional data is available that provides the length of the mollusc shell, including the units of measurement.",,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,mollusc shell length data type,,,,GENEPIO:0100745,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-05-18T19:08:34.869Z,,,,,,,,,,,,,,,,,,,mollusc shell length tag,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A physical characterization data tag which indicates the presence of data that describes the length of a mollusc shell.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C19254,Medical Occupation,Medical Occupation|Health Care Occupation,Occupations within the field of medicine.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Medical Occupation|Health Care Occupation,,,,NCIT:C19254,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Medical Occupation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Occupations within the field of medicine.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001766,2 - high quality draft,,High quality draft: describing sequences with little to no manual review.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001766,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,2 - high quality draft,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,High quality draft: describing sequences with little to no manual review.,,,,,,,,
http://purl.phyloviz.net/ontology/typon#MLVA,Multilocus Variable Number of Tandem Repeats Analysis typing,,"MLVA stands for Multilocus Variable Number of Tandem Repeats Analysis. This method can be performed by three distinct methodologies: by running the amplified locus in a gel , using a capilary electrophoresis apparatus or sequencing the resulting amplified fragment. The first two infer the number of repeats on each locus indirectly by the fragment size.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MLVA,,,,,,,,,,,,,,,,,,,,,,,,http://purl.phyloviz.net/ontology/typon,,,,,,,,,Multilocus Variable Number of Tandem Repeats Analysis typing,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"MLVA stands for Multilocus Variable Number of Tandem Repeats Analysis. This method can be performed by three distinct methodologies: by running the amplified locus in a gel , using a capilary electrophoresis apparatus or sequencing the resulting amplified fragment. The first two infer the number of repeats on each locus indirectly by the fragment size.",,,,MLVA typing,,,,
http://purl.obolibrary.org/obo/FOODON_03510015,food animal as consumer,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0015,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510015,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food animal as consumer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03500019,milk enamel surface for milk,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=N0019,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03500019,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,milk enamel surface for milk,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100206,emergency department exposure process,,A process occuring within or in the vicinity of an emergency department that exposes the recipient organism to a material entity.,FALSE,,,,,,,Emergency Department,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100206,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,emergency department exposure process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A process occuring within or in the vicinity of an emergency department that exposes the recipient organism to a material entity.,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_9397,Chiroptera,,,FALSE,,,,,,,bats,,,,,,,,,,,,,,,,,,,Chiroptera,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:9397,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Chiroptera,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000294,fish farm,,"A facility in which fish are raised commercially in tanks or enclosures, usually for food.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Fish_farm|FTT:694|FTT:123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00000294,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,fish farm,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A facility in which fish are raised commercially in tanks or enclosures, usually for food.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03460329,mold food-curing process,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=H0329,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03460329,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,mold food-curing process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0005267,heart disorder,heart/pericardial trouble|heart/pericardial disorder|heart/pericardial disease or disorder|heart/pericardial disease|heart trouble|heart disorder|heart disease or disorder|heart disease|disorder of heart/pericardium|disorder of heart|disease or disorder of heart|disease of heart|cardiac disease,A disease involving the heart and/or pericardium.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,icd11.foundation:1512587470|UMLS:C0018799|SCTID:56265001|NCIT:C3079|MESH:D006331|MEDGEN:5458|ICD9:V47.2|ICD9:429.9|ICD9:429.89|EFO:0003777|DOID:114,,,,,,,,,,,,,,,,,,,,,,,,,heart/pericardial trouble|heart/pericardial disorder|heart/pericardial disease or disorder|heart/pericardial disease|heart trouble|heart disorder|heart disease or disorder|heart disease|disorder of heart/pericardium|disorder of heart|disease or disorder of heart|disease of heart|cardiac disease,,,,MONDO:0005267,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#rare_grouping|http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,heart disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A disease involving the heart and/or pericardium.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100666,education worker role,,A role inhering in a person that is realized when the bearer is engaged in education work.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100666,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788,2023-01-23T00:42:19.315Z,,,,,,,,,,,,,,,,,,,education worker role,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A role inhering in a person that is realized when the bearer is engaged in education work.,,,,,,,,
http://purl.obolibrary.org/obo/OMIT_0001642,Acute Disease,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OMIT:0001642,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/omit.owl,,,,,,,,,Acute Disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0101085,nucleic acid storage duration value,,PCDS: Provide the numerical value of time.,FALSE,,,,,,,PCDS:nucleic_acid_storage_duration_value,,,,,,,PCDS: Provide the numerical value of time.,,,,,,,,,,,,,,PCDS: 5,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0101085,,,,,,,,,,,,,,2026-04-13T17:18:02.461Z,,,,,,,,,,,,,,,,,,,nucleic acid storage duration value,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PCDS: The numerical value of the time measurement during which the extracted nucleic acid is in storage.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100001,cluster/outbreak investigation sampling,,A sampling strategy in which individuals are chosen for investigation into a disease cluster or outbreak.,FALSE,,,,,,,Cluster/Outbreak investigation,,,,,,,"The terms cluster and outbreak both describe the occurrence of new disease cases within a particular location and time period. The number of cases within a cluster are not necessarily greater than what is expected, however in an outbreak the number of cases does exceed the usual norm. In an outbreak the cases are confirmed to be epidemiologically linked while in a cluster an epidemiological connection is only suspected. Not all clusters are outbreaks, however each cluster needs to be investigated. [Source: https://covid19evidencereviews.saskhealthauthority.ca/en/permalink/coviddoc153]",,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100001,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,cluster/outbreak investigation sampling,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A sampling strategy in which individuals are chosen for investigation into a disease cluster or outbreak.,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0005240,kidney disorder,renal disorder|renal disease|kidney disorder|kidney disease or disorder|kidney disease|disorder of kidney|disease or disorder of kidney|disease of kidney,A disease involving the kidney.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0022658|SCTID:90708001|NCIT:C3149|MESH:D007674|MEDGEN:9635|ICD9:583.81|EFO:0003086|DOID:557,,,,,,,,,,,,,,,,,,,,,,,,,renal disorder|renal disease|kidney disorder|kidney disease or disorder|kidney disease|disorder of kidney|disease or disorder of kidney|disease of kidney,,,,MONDO:0005240,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar|http://purl.oboInOwllibrary.org/oboInOwl/mondo#clingen,,,,,,,,kidney disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A disease involving the kidney.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001457,bioinformatics and QC metrics field category,PCDS:bioinformatics and QC metrics,A data field category which refers to bioinformatics and quality control (QC) metrics fields.,FALSE,,,,,,,PCDS:raw_sequence_data_processing_method_slot_group,,,,,,,PCDS: Provide the name and version numbers of the software used to process the raw data.,,,,,,,,,,,,,,PCDS: measeq 1.2.3,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,PCDS:bioinformatics and QC metrics,bioinformatics and Quality Control metrics slot category|bioinformatics and Quality Control metrics field category|bioinformatics and QC metrics slot category,,,,GENEPIO:0001457,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,bioinformatics and QC metrics field category,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field category which refers to bioinformatics and quality control (QC) metrics fields.,,"PCDS: The method used for raw data processing such as removing barcodes, adapter trimming, filtering etc.",,,,,,
http://purl.obolibrary.org/obo/DOID_13371,scrub typhus,,"A typhus that has_material_basis_in Orientia tsutsugamushi, which is transmitted by trombiculid mites (Leptotrombidium deliense). The infection has symptom fever, has symptom headache, has symptom muscle pain, has symptom cough, has symptom maculopapular rash, has symptom eschar, has symptom splenomegaly and has symptom lymphadenopathy.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:13371,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,scrub typhus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A typhus that has_material_basis_in Orientia tsutsugamushi, which is transmitted by trombiculid mites (Leptotrombidium deliense). The infection has symptom fever, has symptom headache, has symptom muscle pain, has symptom cough, has symptom maculopapular rash, has symptom eschar, has symptom splenomegaly and has symptom lymphadenopathy.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100795,total suspended solids (TSS) measurement unit,total suspended solids (TSS) measurement unit,An environmental data field which describes the units associated with a value from a total suspended solids (TSS) test.,FALSE,,,,,,,PCDS:total_suspended_solids_tss_measurement_unit,,,,,,,PCDS: Provide the units of the measured TSS.,,,,,,,,,,,,,,PCDS: percent (%),,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,total suspended solids (TSS) measurement unit,total suspended solids (TSS) measurement unit slot,,,,GENEPIO:0100795,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,total suspended solids (TSS) measurement unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the units associated with a value from a total suspended solids (TSS) test.,,PCDS: The units associated with a value from a total suspended solids (TSS) test.,,,,,,
http://purl.obolibrary.org/obo/ENVO_0010001,anthropogenic environmental material,,Anthropogenic material in or on which organisms may live.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:0010001,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,anthropogenic environmental material,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Anthropogenic material in or on which organisms may live.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_37945,dibekacin,,"A kanamycin that is kanamycin B lacking the 3- and 4-hydroxy groups on the 2,6-diaminosugar ring.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:37945,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,dibekacin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A kanamycin that is kanamycin B lacking the 3- and 4-hydroxy groups on the 2,6-diaminosugar ring.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0007601,ciliated epithelium,,Epithelium bearing vibratile cilia on the free surface.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0007601,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,ciliated epithelium,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Epithelium bearing vibratile cilia on the free surface.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01001829,human settlement,,An anthropised ecosystem which is determined by the presence of humans and their constructions.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01001829,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,human settlement,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An anthropised ecosystem which is determined by the presence of humans and their constructions.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0002315,Headache,Headaches|Headache,"Cephalgia, or pain sensed in various parts of the head, not confined to the area of distribution of any nerve.",FALSE,,,,,,,,,,,,,,"Headache is one of the most common types of recurrent pain as well as one of the most frequent symptoms in neurology. In addition to occasional headaches, there are well-defined headache disorders that vary in incidence, prevalence and duration and can be divided into two broad categories. In secondary headache disorders, headaches are attributed to another condition, such as brain tumor or head injury; for the primary disorders the headache is not due to another condition.",,,,,,,,,,,,,,,,,,UMLS:C0018681|SNOMEDCT_US:25064002,,,,,,,,,,,,,,,,,,,,,,,HP:0001354|HP:0000266,,Headaches|Headache,,,,HP:0002315,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Headache,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Cephalgia, or pain sensed in various parts of the head, not confined to the area of distribution of any nerve.",,,,,,,,
http://purl.obolibrary.org/obo/GO_0046903,secretion,,The controlled release of a substance by a cell or a tissue.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GO:0046903,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/go.owl,http://purl.oboInOwllibrary.org/oboInOwl/go#goslim_pir,,,,,,,,secretion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The controlled release of a substance by a cell or a tissue.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510250,"human as food consumer, four years and above",,US FDA Approved user group.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0250,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510250,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"human as food consumer, four years and above",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,US FDA Approved user group.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100970,SOLiD 5500xl-W Genetic Analyzer,,A DNA sequencer which is manufactured by the Applied Biosystems corporation. Built upon SOLiD sequencing technology and with a higher throughput than SOLiD 5500xl Genetic Analyzer.,FALSE,,,,,,,SOLiD 5500xl-W,,,,,,,,,,,,,,https://tools.thermofisher.com/content/sfs/brochures/cms_088660.pdf,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100970,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2023-11-28T18:23:15.862Z,,,,,,,,,,,,,,,,,,,SOLiD 5500xl-W Genetic Analyzer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A DNA sequencer which is manufactured by the Applied Biosystems corporation. Built upon SOLiD sequencing technology and with a higher throughput than SOLiD 5500xl Genetic Analyzer.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100920,watershed shapefile filename,watershed shapefile filename,A data field which describes the name of the watershed shapefile.,FALSE,,,,,,,PCDS:watershed_shapefile_filename,,,,,,,"PCDS: Provide the shapefile filename corresponding to the watershed from which the sample was taken. If there are multiple files associated with the watershed, provide all names separated by commas.",,,,,,,,,,,Drafted 2023-07-27,,,"PCDS: siteAD17.shp, siteAD17.kml",,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,watershed shapefile filename,watershed shapefile filename slot,,,,GENEPIO:0100920,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,watershed shapefile filename,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the name of the watershed shapefile.,,PCDS: The name of the watershed shapefile.,,,,,,
http://purl.obolibrary.org/obo/CHEBI_26455,pyrroles,,An azole that includes only one N atom and no other heteroatom as a part of the aromatic skeleton.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:26455,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,pyrroles,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An azole that includes only one N atom and no other heteroatom as a part of the aromatic skeleton.,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_9895,Bovidae,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,Bovidae,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:9895,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Bovidae,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_9733,renal tuberculosis,,An urogenital tuberculosis that results_in formation of granulomas located_in kidney.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:9733,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,renal tuberculosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An urogenital tuberculosis that results_in formation of granulomas located_in kidney.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_35358,sulfonamide,,An amide of a sulfonic acid RS(=O)<small><sub>2</sub></small>NR'<small><sub>2</sub></small>.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:35358,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,sulfonamide,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An amide of a sulfonic acid RS(=O)<small><sub>2</sub></small>NR'<small><sub>2</sub></small>.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001721,NCBI culture collection,,An NCBI culture collection is a composite identifier containing “institution code:collection code”.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,ATCC:26370,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001721,,,,"Annotation with a culture_collection qualifier implies that the sequence was obtained from a sample retrieved (by the submitter or a collaborator) from the indicated culture collection, or that the sequence was obtained from a sample that was deposited (by the submitter or a collaborator) in the indicated culture collection. See the description for the proper format and list of allowed institutes, http://www.insdc.org/controlled-vocabulary-culturecollection-qualifier.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI culture collection,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An NCBI culture collection is a composite identifier containing “institution code:collection code”.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001072,unsure of travel reason,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001072,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,unsure of travel reason,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02021380,veal retail cut (raw),,A raw veal retail cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02021380,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,veal retail cut (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw veal retail cut.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C17471,Youth,Youth 10-21|Youth,The time of life between childhood and maturity.  This period overlaps with adolescence.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Youth 10-21|Youth,,,,NCIT:C17471,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Youth,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The time of life between childhood and maturity.  This period overlaps with adolescence.,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_9103,Meleagris gallopavo,,,FALSE,,,,,,,wild turkey|turkey|common turkey,,,,,,,,,,,,,,,,,,,Meleagris gallopavo,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:9103,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Meleagris gallopavo,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490256,wooden cork,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0256,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490256,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,wooden cork,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000331,pork butt steak (raw),,A raw pork butt steak.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000331,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pork butt steak (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw pork butt steak.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490261,rubber gasket,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0261,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490261,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,rubber gasket,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_63161,glycosyl compound,,"A carbohydrate derivative arising formally from the elimination of water from a glycosidic hydroxy group and an H atom bound to an oxygen, carbon, nitrogen or sulfur atom of a separate entity.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:63161,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,glycosyl compound,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A carbohydrate derivative arising formally from the elimination of water from a glycosidic hydroxy group and an H atom bound to an oxygen, carbon, nitrogen or sulfur atom of a separate entity.",,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00004529,"populated place, Philippines",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00004529,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Philippines",http://purl.obolibrary.org/obo/GAZ_00004525,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HP_0032676,Chronic cutaneous wound,Chronic nonhealing cutaneous wound,"A cutaneous wound that has failed to proceed through the orderly and timely process to produce an atomic and functional integrity, or proceeded through the repair process without establishing a sustained anatomic and functional result.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Chronic nonhealing cutaneous wound,,,,HP:0032676,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Chronic cutaneous wound,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A cutaneous wound that has failed to proceed through the orderly and timely process to produce an atomic and functional integrity, or proceeded through the repair process without establishing a sustained anatomic and functional result.",,,,,,,,
http://purl.obolibrary.org/obo/HP_0032674,Cutaneous wound,Skin wound,"A cutaneous wound is a defined as a disruption of normal anatomic structure and function of the skin that occurs owing to an injury of the skin. Wound healing is a dynamic, interactive process involving soluble mediators, blood cells, extracellularmatrix, and parenchymal cells. Wound healing has three phases: inflammation, tissue formation, and tissue remodeling, that overlap in time.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Skin wound,,,,HP:0032674,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Cutaneous wound,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A cutaneous wound is a defined as a disruption of normal anatomic structure and function of the skin that occurs owing to an injury of the skin. Wound healing is a dynamic, interactive process involving soluble mediators, blood cells, extracellularmatrix, and parenchymal cells. Wound healing has three phases: inflammation, tissue formation, and tissue remodeling, that overlap in time.",,,,,,,,
http://purl.obolibrary.org/obo/HP_0032675,Acute cutaneous wound,,A cutaneous wound that is proceeding through an orderly and timely reparative process that results in sustained restoration of the anatomic and functional integrity of the skin.,FALSE,,,,,,,,,,,,,,"Wound healing accors in multiple overlapping stages, with re=-eipthelialization normally beginning on day one or two. In most clinical settings, closure of acute and chronic wounds is considered the wound healing end point, but wounds can continue to undergo remodeling or tissue maturation for several months or even years.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0032675,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Acute cutaneous wound,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A cutaneous wound that is proceeding through an orderly and timely reparative process that results in sustained restoration of the anatomic and functional integrity of the skin.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_28915,fosfomycin,,"A phosphonic acid having an (<i>R</i>,<i>S</i>)-1,2-epoxypropyl group attached to phosphorus.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:8159|CHEBI:42503|CHEBI:24100,,,,,,CHEBI:28915,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,fosfomycin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A phosphonic acid having an (<i>R</i>,<i>S</i>)-1,2-epoxypropyl group attached to phosphorus.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000063,beef sierra steak,,A thin muscle that lays in the seam between the chuck eye roll and under blade.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000063,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef sierra steak,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A thin muscle that lays in the seam between the chuck eye roll and under blade.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001586,synthetic sample scope,,A synthetic sample scope involves a sample synthesized in a laboratory.,FALSE,,,,,,,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/books/NBK54364/,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001586,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,synthetic sample scope,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A synthetic sample scope involves a sample synthesized in a laboratory.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510104,no artificial sweeteners claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0104,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510104,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,no artificial sweeteners claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100087,obsolete: cardiac injury,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,"Redundant with ""term replaced by"" entity.",,,,,,,,,,,,,,,,,,,GENEPIO:0100087,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: cardiac injury,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0100074,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000319,"pork leg center slice (cured, raw)",,A raw and cured pork leg center slice.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000319,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"pork leg center slice (cured, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw and cured pork leg center slice.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100821,sample temperature value at collection,sample temperature value (at collection),An environmental data field which describes the numerical value of a measurement of temperature of a sample at collection.,FALSE,,,,,,,PCDS:sample_temperature_value_at_collection,,,,,,,PCDS: Provide the numerical value of the measured temperature.,,,,,,,,,,,,,,PCDS: 20,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,sample temperature value (at collection),sample temperature at collection value slot,,,,GENEPIO:0100821,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,sample temperature value at collection,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the numerical value of a measurement of temperature of a sample at collection.,,PCDS: The numerical value of a measurement of temperature of a sample at collection.,,,,,,
http://purl.obolibrary.org/obo/CHEBI_26273,proline derivative,,"An amino acid derivative resulting from reaction of proline at the amino group or the carboxy group, or from the replacement of any hydrogen of proline by a heteroatom. The definition normally excludes peptides containing proline residues.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:26273,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,proline derivative,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An amino acid derivative resulting from reaction of proline at the amino group or the carboxy group, or from the replacement of any hydrogen of proline by a heteroatom. The definition normally excludes peptides containing proline residues.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000107,obsolete: HIPPA PHI data item,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000103,,,,,,,,,,,,,,,,,,,GENEPIO:0000107,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: HIPPA PHI data item,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0000017,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490105,"plastic squeeze bottle or tube, top lined with cork",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0105,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490105,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"plastic squeeze bottle or tube, top lined with cork",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/PECO_0007359,plant experimental condition,,"A plant exposure (PECO:0001001) and/or study condition (PECO:0007231) applied to a whole plant (PO:0000003), a plant structure (PO:00090119), and/or a plant population.",FALSE,,,,,,,,,,,,,,"The Plant Experimental Condition Ontology describes the treatments and/or study conditions used in plant biology experiments. The subjects of the studies may also include in vitro plant structures (PO:0000004). The broadest classes are the plant study conditions (PECO:0007231), where the terms describe the type of growth facility used in an experiment. Each study type such as field study (PECO:0007256), growth chamber study (PECO:0007269), greenhouse study (PECO:0007248), or laboratory study (PECO:0007255) will also involve different growing conditions, and may also include specific biotic (PECO:0007357) and/or abiotic (PECO:0007191) plant treatments. A plant exposure (PECO:0001001) may be a component of a plant experimental condition (PECO:0007359), and the plant study condition (PECO:0007231).",,,,,,,,,,,,,,,,,,PECO_GIT:4,,,,,,,,,,,,,,,,,,,,,,,EO:0007359,,,,,,PECO:0007359,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/peco.owl,,,,,,,,,plant experimental condition,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A plant exposure (PECO:0001001) and/or study condition (PECO:0007231) applied to a whole plant (PO:0000003), a plant structure (PO:00090119), and/or a plant population.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_16991,deoxyribonucleic acid,,"High molecular weight, linear polymers, composed of nucleotides containing deoxyribose and linked by phosphodiester bonds; DNA contain the genetic information of organisms.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:4291|CHEBI:33698|CHEBI:21123|CHEBI:13302,,,,,,CHEBI:16991,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,deoxyribonucleic acid|deoxyribonucleic acid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"High molecular weight, linear polymers, composed of nucleotides containing deoxyribose and linked by phosphodiester bonds; DNA contain the genetic information of organisms.",,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00004187,Union Territory (India),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00004187,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Union Territory (India),http://purl.obolibrary.org/obo/GAZ_00002839,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_52429,propicillin,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:52429,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,propicillin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ECTO_6000030,exposure to hunting,hunting behavior exposure,An exposure event involving hunting behavior,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,hunting behavior exposure,,,,ECTO:6000030,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ecto.owl,,,,,,,,,exposure to hunting,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An exposure event involving hunting behavior,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100228,veterinary care clinic exposure process,,A process occuring within or in the vicinity of a veterinary facility that exposes the recipient organism to a material entity.,FALSE,,,,,,,Veterinary Care Clinic,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100228,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,veterinary care clinic exposure process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A process occuring within or in the vicinity of a veterinary facility that exposes the recipient organism to a material entity.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001089,injection drug use status,,"",FALSE,,,,,,,,,,,,,,,,,,,,,"",,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001089,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,injection drug use status,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102277,prior antiviral treatment agent,,A data field which describes the name of the antiviral treatment agent administered during a prior pathogen infection.,FALSE,,,,,,,PCDS:prior_antiviral_treatment_agent,,,,,,,"PCDS: Provide the name of the antiviral treatment agent administered during the most recent prior infection. If no treatment was administered, put 'No treatment'. If multiple antiviral agents were administered, list them all separated by commas.",,,,,,,,,,,,,,PCDS: Remdesivir,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102277,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2026-04-09T18:02:29.914Z,,,,,,,,,,,,,,,,,,,prior antiviral treatment agent,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the name of the antiviral treatment agent administered during a prior pathogen infection.,,PCDS: The name of the antiviral treatment agent administered during the prior pathogen infection.,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490185,"plastic container, rigid or semirigid, tinless steel lid",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0185,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490185,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"plastic container, rigid or semirigid, tinless steel lid",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://semanticscience.org/resource/SIO_000964,standard operating procedure,,A standard operating procedure is a specification approved for use in specific environments.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,resource:SIO_000964,,,,,,,,,,,,,,,,,,,,,,,,http://semanticscience.org/ontology/sio.owl,,,,,,,,,standard operating procedure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A standard operating procedure is a specification approved for use in specific environments.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_73772,K antigen,,Any capsular polysaccharide derivative which is carried on the surface of a bacterial capsule or formed on the outer portion of a cell wall and masks somatic O antigens.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley's note: 'K antigen' can't be a subclass of antigen as chemical entity is disjoint from role.,,,,,,,Snomed: Concept 260824002,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/CHEBI_59132,,,,,,,,,,,,CHEBI:73772,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,K antigen,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/CHEBI_59132,,,,,,,,,,Any capsular polysaccharide derivative which is carried on the surface of a bacterial capsule or formed on the outer portion of a cell wall and masks somatic O antigens.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490152,"paperboard container, waxed",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0152,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490152,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"paperboard container, waxed",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0724,She in China (HGDP),She,A population made up of 8 samples from She individuals recruited in China as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,She,,,,HANCESTRO:0724,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,She in China (HGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 8 samples from She individuals recruited in China as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0726,Tujia in China (HGDP),Tujia,A population made up of 8 samples from Tujia individuals recruited in China as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Tujia,,,,HANCESTRO:0726,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Tujia in China (HGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 8 samples from Tujia individuals recruited in China as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0723,Oroqen in China (HGDP),Oroqen,A population made up of 7 samples from Oroqen individuals recruited in China as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Oroqen,,,,HANCESTRO:0723,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Oroqen in China (HGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 7 samples from Oroqen individuals recruited in China as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0720,Mongolian in China (HGDP),Mongolian,A population made up of 8 samples from Mongolian individuals recruited in China as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Mongolian,,,,HANCESTRO:0720,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Mongolian in China (HGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 8 samples from Mongolian individuals recruited in China as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0721,Naxi in China (HGDP),Naxi,A population made up of 6 samples from Naxi individuals recruited in China as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Naxi,,,,HANCESTRO:0721,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Naxi in China (HGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 6 samples from Naxi individuals recruited in China as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0728,Yakut in Siberia (HGDP),Yakut,A population made up of 23 samples from Yakut individuals recruited in Siberia as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Yakut,,,,HANCESTRO:0728,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Yakut in Siberia (HGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 23 samples from Yakut individuals recruited in Siberia as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0722,Northern Han in China (HGDP),Northern Han,A population made up of 10 samples from Northern Han individuals recruited in China as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Northern Han,,,,HANCESTRO:0722,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Northern Han in China (HGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 10 samples from Northern Han individuals recruited in China as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0729,Yi in China (HGDP),Yi,A population made up of 8 samples from Yi individuals recruited in China as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Yi,,,,HANCESTRO:0729,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Yi in China (HGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 8 samples from Yi individuals recruited in China as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0725,Tu in China (HGDP),Tu,A population made up of 8 samples from Tu individuals recruited in China as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Tu,,,,HANCESTRO:0725,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Tu in China (HGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 8 samples from Tu individuals recruited in China as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0727,Xibo in China (HGDP),Xibo,A population made up of 7 samples from Xibo individuals recruited in China as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Xibo,,,,HANCESTRO:0727,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Xibo in China (HGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 7 samples from Xibo individuals recruited in China as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0011122,Abnormality of skin physiology,Abnormality of skin physiology,Any abnormality of the physiological function of the skin.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4023527,,,,,,,,,,,,,,,,,,,,,,,,,Abnormality of skin physiology,,,,HP:0011122,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormality of skin physiology,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any abnormality of the physiological function of the skin.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0011121,Abnormal skin morphology,Abnormality of skin morphology|Abnormal skin structure|Abnormal skin morphology,Any morphological abnormality of the skin.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4023528|Fyler:4133,,,,,,,,,,,,,,,,,,,,,,,,,Abnormality of skin morphology|Abnormal skin structure|Abnormal skin morphology,,,,HP:0011121,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal skin morphology,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any morphological abnormality of the skin.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0011123,Inflammatory abnormality of the skin,Skin inflammation|Inflammatory abnormality of the skin|Abnormal tendency to infections of the skin,"The presence of inflammation of the skin. That is, an abnormality of the skin resulting from the local accumulation of fluid, plasma proteins, and leukocytes.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C3875321|UMLS:C0011603|SNOMEDCT_US:703938007|MP:0004947,,,,,,,,,,,,,,,,,,,,,,,HP:0007423|HP:0002727,,Skin inflammation|Inflammatory abnormality of the skin|Abnormal tendency to infections of the skin,,,,HP:0011123,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Inflammatory abnormality of the skin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The presence of inflammation of the skin. That is, an abnormality of the skin resulting from the local accumulation of fluid, plasma proteins, and leukocytes.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0003457,head bone,head bone organ|bone organ of head|bone organ of adult head|bone of head|bone of adult head|adult head bone organ|adult head bone,A bone that is part of a head [Automatically generated definition].,FALSE,,,,,,,,,,,,,,Different sources vary regarding which bones are craniofacial; e.g. hyoid bone,,,,,,,,,,,,,,,,,,SCTID:118646007|MA:0000576|EMAPA:35996,,,,,,,,,,,,,,,,,,,,,,,,,head bone organ|bone organ of head|bone organ of adult head|bone of head|bone of adult head|adult head bone organ|adult head bone,,,,UBERON:0003457,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,head bone,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A bone that is part of a head [Automatically generated definition].,,,,,,,,
http://purl.obolibrary.org/obo/UO_0010004,micromole per kilogram,,A specific concentration unit which is equal to 1 micromole of a given substance per kilogram of solvent.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:0010004,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,micromole per kilogram,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A specific concentration unit which is equal to 1 micromole of a given substance per kilogram of solvent.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0010002,millisiemens,,An electrical conduction unit which is equal to one thousandth of a siemen or 10^[-3] siemens.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:0010002,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,millisiemens,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An electrical conduction unit which is equal to one thousandth of a siemen or 10^[-3] siemens.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0010003,micromole per litre,,A specific concentration unit which is equal to 1 micromole in a given volume of one thousandth of a cubic meter.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:0010003,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,micromole per litre,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A specific concentration unit which is equal to 1 micromole in a given volume of one thousandth of a cubic meter.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000131,beef strip petite roast,,A smaller roasting option than Strip Roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000131,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef strip petite roast,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A smaller roasting option than Strip Roast.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510204,natural source of vitamins and or minerals claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0204,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510204,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,natural source of vitamins and or minerals claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_51959,organic tricyclic compound,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:51959,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,organic tricyclic compound,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490262,steel solder,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0262,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490262,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,steel solder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002181,obsolete: antimicrobial resistance phenotype - epidemiological cut-off values,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002181,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: antimicrobial resistance phenotype - epidemiological cut-off values,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,http://purl.obolibrary.org/obo/ARO_3004431,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_33458,nitrogen oxoanion,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:33458,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,nitrogen oxoanion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0003914,epithelial tube,epithelial or endothelial tube,"Epithelial tubes transport gases, liquids and cells from one site to another and form the basic structure of many organs and tissues, with tube shape and organization varying from the single-celled excretory organ in Caenorhabditis elegans to the branching trees of the mammalian kidney and insect tracheal system.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FBbt:00007474|EHDAA2:0003114|AEO:0000114,,,,,,,,,,,,,,,,,,,,,,,,,epithelial or endothelial tube,,,,UBERON:0003914,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,epithelial tube,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Epithelial tubes transport gases, liquids and cells from one site to another and form the basic structure of many organs and tissues, with tube shape and organization varying from the single-celled excretory organ in Caenorhabditis elegans to the branching trees of the mammalian kidney and insect tracheal system.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100502,contact with probable Monkeypox case exposure process,contact with probable Monkeypox case,A process occuring within or in the vicinity of a human with a probable case of COVID-19 that exposes the recipient organism to Monkeypox.,FALSE,,,,,,,Contact with Probable Monkeypox Case,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,contact with probable Monkeypox case,,,,GENEPIO:0100502,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-01-23T00:42:19.315Z,,,,,,,,,,,,,,,,,,,contact with probable Monkeypox case exposure process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A process occuring within or in the vicinity of a human with a probable case of COVID-19 that exposes the recipient organism to Monkeypox.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002153,MIC dilution measurement specification,,A value specification for a MIC test measurement resulting from a laboratory dilution method.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002153,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ARO_3004397,,,,,,MIC dilution measurement specification,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ARO_3004371,,,,Damion Dooley,,,,A value specification for a MIC test measurement resulting from a laboratory dilution method.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C64979,Diagnostic Surgical Procedure,Diagnostic Surgical Procedure,Surgery results used to facilitate arriving at a diagnosis.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Diagnostic Surgical Procedure,,,,NCIT:C64979,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Diagnostic Surgical Procedure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Surgery results used to facilitate arriving at a diagnosis.,,,,,,,,
http://purl.obolibrary.org/obo/IAO_0000033,directive information entity,,An information content entity whose concretizations indicate to their bearer how to realize them in a process.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Werner pushed back on calling it realizable information entity as it isn't realizable. However this name isn't right either. An example would be a recipe. The realizable entity would be a plan, but the information entity isn't about the plan, it, once concretized, *is* the plan. -Alan|8/6/2009 Alan Ruttenberg: Changed label from ""information entity about a realizable"" after discussions at ICBO|2013-05-30 Alan Ruttenberg: What differentiates a directive information entity from an information concretization is that it can have concretizations that are either qualities or realizable entities. The concretizations that are realizable entities are created when an individual chooses to take up the direction, i.e. has the intention to (try to) realize it.|2009-03-16: provenance: a term realizable information entity was proposed for OBI (OBI_0000337) , edited by the PlanAndPlannedProcess branch. Original definition was  ""is the specification of a process that can be concretized and realized by an actor"" with alternative term  ""instruction"".It has been subsequently moved to IAO where the objective for which the original term was defined was satisfied with the definitionof this, different, term.",,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,IAO:0000033,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/iao.owl|http://purl.obolibrary.org/obo/hso.owl|http://purl.obolibrary.org/obo/cob.owl,,,,,,,,,directive information entity,,,,,,,,,,,,,,,,,,,,,,,,,,,,PERSON: Bjoern Peters|PERSON: Alan Ruttenberg,,,,An information content entity whose concretizations indicate to their bearer how to realize them in a process.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490260,plastic gasket,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0260,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490260,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,plastic gasket,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0020010,infectious disorder of the nervous system,nervous system infectious disorder|nervous system infectious disease,A infectious disease that involves the nervous system.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0597039|SCTID:128116006|Orphanet:98010|NCIT:C27590|MEDGEN:108926|ICD9:349.89,,,,,,,,,,,,,,,,,,,,,,,,,nervous system infectious disorder|nervous system infectious disease,,,,MONDO:0020010,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar|http://purl.oboInOwllibrary.org/oboInOwl/mondo#ordo_group_of_disorders|http://purl.oboInOwllibrary.org/oboInOwl/mondo#disease_grouping,,,,,,,,infectious disorder of the nervous system,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A infectious disease that involves the nervous system.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001609,draft isolate details model,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001609,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,draft isolate details model,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100719,microbiological identification tag (Fatty acid methyl esters (FAME)),microbiological identification data type (Fatty acid methyl esters),A microbiological characterization data tag which indicates the presence of microbiological identification data derived using the Fatty acid methyl esters (FAME) identification system.,FALSE,,,,,,,microbiological identification (FAME),,,,,,,Example Guidance: Use this tag to indicate additional data is available that provides identification information from microbiology properties generated using FAME.,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,microbiological identification data type (Fatty acid methyl esters),,,,GENEPIO:0100719,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-05-18T19:08:34.869Z,,,,,,,,,,,,,,,,,,,microbiological identification tag (Fatty acid methyl esters (FAME)),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A microbiological characterization data tag which indicates the presence of microbiological identification data derived using the Fatty acid methyl esters (FAME) identification system.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0050052,Rocky Mountain spotted fever,,"A spotted fever that has_material_basis_in Rickettsia rickettsii, which is transmitted_by ticks (Dermacentor variabilis and Dermacentor andersoni). The infection has_symptom fever, has_symptom headache, has_symptom abdominal pain, and has_symptom maculopapular rash progressing into papular or petechial rash.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0050052,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,Rocky Mountain spotted fever,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A spotted fever that has_material_basis_in Rickettsia rickettsii, which is transmitted_by ticks (Dermacentor variabilis and Dermacentor andersoni). The infection has_symptom fever, has_symptom headache, has_symptom abdominal pain, and has_symptom maculopapular rash progressing into papular or petechial rash.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_0050059,oropharyngeal anthrax,,"A gastrointestinal anthrax that results in infection located in mucosa of oropharynx, has_material_basis_in Bacillus anthracis, which is transmitted by ingestion of anthrax-infected meat. The infection has symptom lesions, has symptom vomiting of blood, has symptom severe diarrhea, has symptom loss of appetite.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0050059,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,oropharyngeal anthrax,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A gastrointestinal anthrax that results in infection located in mucosa of oropharynx, has_material_basis_in Bacillus anthracis, which is transmitted by ingestion of anthrax-infected meat. The infection has symptom lesions, has symptom vomiting of blood, has symptom severe diarrhea, has symptom loss of appetite.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_0050050,Japanese spotted fever,,"A spotted fever that has_material_basis_in Rickettsia japonica, which is transmitted_by ticks (Dermacentor taiwanensis and Haemaphysalis flava). The infection has_symptom fever, has_symptom eschars, has_symptom regional adenopathy, and has_symptom rash on extremities.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0050050,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,Japanese spotted fever,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A spotted fever that has_material_basis_in Rickettsia japonica, which is transmitted_by ticks (Dermacentor taiwanensis and Haemaphysalis flava). The infection has_symptom fever, has_symptom eschars, has_symptom regional adenopathy, and has_symptom rash on extremities.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_0050051,Rickettsia parkeri spotted fever,,"A spotted fever that has_material_basis_in Rickettsia parkeri, which is transmitted_by Gulf Coast tick (Amblyomma maculatum). The infection has_symptom fever, has_symptom headache, has_symptom eschar, and has_symptom rash.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0050051,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,Rickettsia parkeri spotted fever,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A spotted fever that has_material_basis_in Rickettsia parkeri, which is transmitted_by Gulf Coast tick (Amblyomma maculatum). The infection has_symptom fever, has_symptom headache, has_symptom eschar, and has_symptom rash.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_37,skin disease,,An integumentary system disease that is located_in skin.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:37,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,skin disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An integumentary system disease that is located_in skin.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C35552,Cardiovascular System Finding,Cardiovascular System Finding|Cardiovascular Finding|CARDIOVASCULAR SYSTEM,"Symptoms, physical examination results, and/or laboratory test results related to the cardiovascular system.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Cardiovascular System Finding|Cardiovascular Finding|CARDIOVASCULAR SYSTEM,,,,NCIT:C35552,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Cardiovascular System Finding,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Symptoms, physical examination results, and/or laboratory test results related to the cardiovascular system.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001048,infectious disease exposure event,,An event where one or more hosts are exposed to an infectious pathogen,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001048,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,infectious disease exposure event,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,An event where one or more hosts are exposed to an infectious pathogen,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020162,chicken fillet (raw),,A raw chicken fillet cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020162,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,chicken fillet (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw chicken fillet cut.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_51751,enamide,,"An α,β-unsaturated carboxylic acid amide of general formula R<small><sup>1</small></sup>R<small><sup>2</small></sup>C=CR<small><sup>3</small></sup>‒C(=O)NR<small><sup>4</small></sup>R<small><sup>5</small></sup> in which the amide C=O function is conjugated to a C=C double bond at the α,β position.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:51751,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,enamide,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An α,β-unsaturated carboxylic acid amide of general formula R<small><sup>1</small></sup>R<small><sup>2</small></sup>C=CR<small><sup>3</small></sup>‒C(=O)NR<small><sup>4</small></sup>R<small><sup>5</small></sup> in which the amide C=O function is conjugated to a C=C double bond at the α,β position.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000264,lamb sirloin chop,,A lamb chop that derives from the sirloin portion of the leg. The cut location extends from the anterior end of the Pelvic bone to the hip socket.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000264,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lamb sirloin chop,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A lamb chop that derives from the sirloin portion of the leg. The cut location extends from the anterior end of the Pelvic bone to the hip socket.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000293,pork loin blade roast (raw),,A raw pork loin blade roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000293,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pork loin blade roast (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw pork loin blade roast.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C53471,Isolate,Microbial Isolate|Isolate|ISOLATE,A specific individual microbe and its genetically identical progeny separated on a single occasion from a sample taken from a host or culture system.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Microbial Isolate|Isolate|ISOLATE,,,,NCIT:C53471,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Isolate,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A specific individual microbe and its genetically identical progeny separated on a single occasion from a sample taken from a host or culture system.,,,,,,,,
http://purl.obolibrary.org/obo/OBA_2001031,age of onset of refractive error,age refractive error symptoms begin|age at onset of refractive error,The age at which refractive error manifestations first appear.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,age refractive error symptoms begin|age at onset of refractive error,,,,OBA:2001031,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age of onset of refractive error,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The age at which refractive error manifestations first appear.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03450033,heating container in double boiler,,Heating a container that is placed in another container filled with boiling water.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=G0033,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03450033,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,heating container in double boiler,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Heating a container that is placed in another container filled with boiling water.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002234,microbial 16S RNA typing,,A method for typing The RNA component of the small (30S) subunit of prokaryotic ribosomes.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002234,,,,,,,,,,,,,,2020-04-24T19:06:05Z,,,,,,,,,,,,,,,,,,,microbial 16S RNA typing,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://orcid.org/0000-0002-8844-9165,,,,A method for typing The RNA component of the small (30S) subunit of prokaryotic ribosomes.,,,,,,,,
http://purl.obolibrary.org/obo/PCO_0000033,human social gathering activity,,A type of social behavior in which a collection of humans intentionally gathers together on a temporary basis to engage socially.,FALSE,,,,,,,,,,,,,,,,,,,,,GenEpiO curators,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PCO:0000033,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/pco.owl,,,,,,,,,human social gathering activity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A type of social behavior in which a collection of humans intentionally gathers together on a temporary basis to engage socially.,,,,social gathering,,,,
http://purl.obolibrary.org/obo/ENVO_00000062,populated place,place,Place or area with clustered or scattered buildings and a permanent human population.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Populated_place|TGN:83002|TGN:22201|Geonames:P.PPLS|Geonames:P.PPL|FTT:33|FTT:1097,,,,,,,,,,,,,,,,,,,,,,,,place,settlement|populated places,,,,ENVO:00000062,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,populated place,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Place or area with clustered or scattered buildings and a permanent human population.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100321,vaccination history,,A host data field which describes the description of the vaccines received and the administration dates of a series of vaccinations against a specific disease or a set of diseases.,FALSE,,,,,,,PCDS:vaccination_history,,,,,,,"PCDS: Free text description of the dates and vaccines administered against a particular disease/set of diseases. It is also acceptable to concatenate the individual dose information (vaccine name, vaccination date) separated by semicolons.",,,,,,,,,,,,,,PCDS: IMVAMUNE (Bavarian Nordic); 2022-06-01,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100321,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,vaccination history,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A host data field which describes the description of the vaccines received and the administration dates of a series of vaccinations against a specific disease or a set of diseases.,,PCDS: A description of the vaccines received and the administration dates of a series of vaccinations against a specific disease or a set of diseases.,,,,,,
http://www.w3.org/2006/vcard/ns#Acquaintance,acquaintance,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Acquaintance,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/arg/isf-dev.owl,,,,,,,,,acquaintance,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01001311,solid surface layer,,A surface layer which is composed primarily of solid environmental material.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01001311,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,solid surface layer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A surface layer which is composed primarily of solid environmental material.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002025,subject health status (AHA),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002025,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,subject health status (AHA),,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0002019,,,,,,,,,,,,,depth:1,,,,,
http://purl.obolibrary.org/obo/FOODON_02000072,beef shoulder clod arm roast (raw),,A raw beef shoulder clod arm roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000072,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef shoulder clod arm roast (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef shoulder clod arm roast.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510263,"infant as food consumer, 0 - 6 months",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0263,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510263,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"infant as food consumer, 0 - 6 months",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000297,ribeye chop (raw),,A raw ribeye chop.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000297,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,ribeye chop (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw ribeye chop.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510059,general label claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0059,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510059,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,general label claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490292,"aluminium can, drum or barrel, varnished",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0292,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490292,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"aluminium can, drum or barrel, varnished",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_25529,pyridinecarboxamide,,A member of the class of pyridines that is a substituted pyridine in which at least one of the substituents is a carboxamide or <em>N</em>-substituted caraboxamide group.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:25529,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,pyridinecarboxamide,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A member of the class of pyridines that is a substituted pyridine in which at least one of the substituents is a carboxamide or <em>N</em>-substituted caraboxamide group.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0549,Zambian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0549,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Zambian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0547,Togolese,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0547,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Togolese,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0543,Nigerien,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0543,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Nigerien,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0542,Mozambican,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0542,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Mozambican,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0548,Tanzanian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0548,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Tanzanian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0545,Rwandan,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0545,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Rwandan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0540,Malawian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0540,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Malawian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0541,Malian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0541,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Malian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0544,Nigerian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0544,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Nigerian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490140,"glass container, plastic lid, aluminum foil lining",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0140,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490140,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"glass container, plastic lid, aluminum foil lining",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0015880,external iliac lymph node,external iliac node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0229815|SCTID:245358008|NCIT:C88143|FMA:16646,,,,,,,,,,,,,,,,,,,,,,,,,external iliac node,,,,UBERON:0015880,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,external iliac lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0015884,presymphysial lymph node,presymphysial node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SCTID:279448009|FMA:16667,,,,,,,,,,,,,,,,,,,,,,,,,presymphysial node,,,,UBERON:0015884,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,presymphysial lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0015883,gluteal lymph node,gluteal node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SCTID:276154000|FMA:16657,,,,,,,,,,,,,,,,,,,,,,,,,gluteal node,,,,UBERON:0015883,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,gluteal lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0015881,internal iliac lymph node,internal iliac node,"The internal iliac lymph nodes (or hypogastric) surround the internal iliac artery and its branches (the hypogastric vessels), and receive the lymphatics corresponding to the distribution of the branches of it, i. e. , they receive lymphatics from all the pelvic viscera, from the deeper parts of the perineum, including the membranous and cavernous portions of the urethra, and from the buttock and back of the thigh. It does not receive lymph from the ovary, testis, or superior half of the rectum; the gonads drain to the paraaortic lymph nodes, while the superior half of the rectum drains to the pararectal lymph nodes.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Internal_iliac_lymph_nodes|UMLS:C0447192|SCTID:245357003|NCIT:C88142|FMA:16654,,,,,,,,,,,,,,,,,,,,,,,,,internal iliac node,,,,UBERON:0015881,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,internal iliac lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The internal iliac lymph nodes (or hypogastric) surround the internal iliac artery and its branches (the hypogastric vessels), and receive the lymphatics corresponding to the distribution of the branches of it, i. e. , they receive lymphatics from all the pelvic viscera, from the deeper parts of the perineum, including the membranous and cavernous portions of the urethra, and from the buttock and back of the thigh. It does not receive lymph from the ovary, testis, or superior half of the rectum; the gonads drain to the paraaortic lymph nodes, while the superior half of the rectum drains to the pararectal lymph nodes.",,,,,,,,
http://purl.obolibrary.org/obo/HP_0004936,Venous thrombosis,Blood clot in vein,"Formation of a blood clot (thrombus) inside a vein, causing the obstruction of blood flow.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0042487|SNOMEDCT_US:111293003,,,,,,,,,,,,,,,,,,,,,,,,,Blood clot in vein,,,,HP:0004936,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Venous thrombosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Formation of a blood clot (thrombus) inside a vein, causing the obstruction of blood flow.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100329,NCBI SRA filename,filename4|filename3|filename2,"A filename that denotes a data file associated with a sequencing library submission to the National Center for Biotechnology Information (NCBI) Sequence Read Archive (SRA), where the file corresponds to the library described by the row in which the filename is specified.",FALSE,,,,,,,PCDS:ncbi_sra_filename,,,,,,,"PCDS: Provide the appropriate filename recorded in the Bioinformatics and QC metrics section. If sequence data is 'paired', provide the second filename under 'Filename 2'.",,,,,,,,,,,"These metadata fields are defined specifically for use with the NCBI SRA submission template. They are organizational constructs intended to support a particular template and underlying database and should not be reused to model metadata outside the intended context. Where possible, more general, template‑independent terms should be used instead.",,,PCDS: SARSCoV2_NP_Sample123_R1.fastq.gz,,,requires discussion,,,,,,,,,,,,,,,,,filename4|filename3|filename2,,,,,,,,filename,NCBI SRA filename,,,,GENEPIO:0100329,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788,2026-01-28T20:28:47.344Z,,,,,,,,,,,,,,,,,,,NCBI SRA filename,,,,,,,,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/core/assets/sra/files/SRA_metadata_acc_example.xlsx,,,,,,,,,,"A filename that denotes a data file associated with a sequencing library submission to the National Center for Biotechnology Information (NCBI) Sequence Read Archive (SRA), where the file corresponds to the library described by the row in which the filename is specified.",,PCDS: See NCBI SRA template for details.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100532,prior mpox infection status,prior Monkeypox infection,A data field which describes the absence or presence of a prior Monkeypox infection.,FALSE,,,,,,,PCDS:prior_mpox_infection,,,,,,,"PCDS: If known, provide information about whether the individual had a previous Mpox infection. Select a value from the pick list.",,,,,,,,,,,,,,PCDS: Prior infection,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,prior Monkeypox infection,prior Monkeypox infection,,,,GENEPIO:0100532,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,prior mpox infection status,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the absence or presence of a prior Monkeypox infection.,,PCDS: The absence or presence of a prior Mpox infection.,,,,,,
http://purl.obolibrary.org/obo/HP_0032158,Unusual infection by anatomical site,,An unusual infection classified by the affected body part.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0032158,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Unusual infection by anatomical site,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An unusual infection classified by the affected body part.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0032155,Abdominal cramps,,A type of abdominal pain characterized by a feeling of contractions and typically fluctuating in intensity.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0032155,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abdominal cramps,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A type of abdominal pain characterized by a feeling of contractions and typically fluctuating in intensity.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510262,weight-reducer as food consumer,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0262,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510262,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,weight-reducer as food consumer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000247,lamb shoulder arm,,A whole cut from the shoulder. The shoulder arm consists of the muscle groups that extend from the elbow joint to the shoulder joint and includes the first three ribs.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000247,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lamb shoulder arm,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A whole cut from the shoulder. The shoulder arm consists of the muscle groups that extend from the elbow joint to the shoulder joint and includes the first three ribs.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_11077,brucellosis,,"A primary bacterial infectious disease that is caused by the bacteria of the genus Brucella, when humans come in contact with contaminated animals or animal products or ingestion of infected food products. The disease has_symptom fever, has_symptom sweat, has_symptom headache, has_symptom back pain, has_symptom physical weakness, has_symptom joint pain and has_symptom fatigue.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:11077,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,brucellosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A primary bacterial infectious disease that is caused by the bacteria of the genus Brucella, when humans come in contact with contaminated animals or animal products or ingestion of infected food products. The disease has_symptom fever, has_symptom sweat, has_symptom headache, has_symptom back pain, has_symptom physical weakness, has_symptom joint pain and has_symptom fatigue.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_11076,Brucella suis brucellosis,,"A brucellosis that involves an infection caused by Brucella suis in swine and humans. The disease has_symptom fever, has_symptom chills, has_symptom malaise, has_symptom diaphoresis, has_symptom arthralgia, has_symptom myalgia, has_symptom headache, has_symptom anorexia, and has_symptom fatigue.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:11076,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,Brucella suis brucellosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A brucellosis that involves an infection caused by Brucella suis in swine and humans. The disease has_symptom fever, has_symptom chills, has_symptom malaise, has_symptom diaphoresis, has_symptom arthralgia, has_symptom myalgia, has_symptom headache, has_symptom anorexia, and has_symptom fatigue.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490181,laminate container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0181,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490181,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,laminate container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_471744,imipenem,,"A broad-spectrum, intravenous β-lactam antibiotic of the carbapenem subgroup.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:5879,,,,,,CHEBI:471744,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,imipenem,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A broad-spectrum, intravenous β-lactam antibiotic of the carbapenem subgroup.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020250,piece of chicken breast,,A piece of a chicken breast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020250,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of chicken breast,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A piece of a chicken breast.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C25254,Progressive,Progressive,Advancing in extent or severity.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Progressive,,,,NCIT:C25254,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Progressive,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Advancing in extent or severity.,,,,,,,,
http://purl.obolibrary.org/obo/BFO_0000015,process,,"p is a process = Def. p is an occurrent that has temporal proper parts and for some time t, p s-depends_on some material entity at t. (axiom label in BFO2 Reference: [083-003])|An occurrent that has temporal proper parts and for some time t, p s-depends_on some material entity at t.|p is a process = Def. p is an occurrent that has temporal proper parts and for some time t, p s-depends_on some material entity at t. (axiom label in BFO2 Reference: [083-003])|An occurrent that has temporal proper parts and for some time t, p s-depends_on some material entity at t.",FALSE,,,,,,,,,,,,,,"An occurrent that has temporal proper parts and for some time t, p s-depends_on some material entity at t.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,BFO:0000015,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl|http://purl.obolibrary.org/obo/pco.owl|http://purl.obolibrary.org/obo/pato.owl|http://purl.obolibrary.org/obo/ogms.owl|http://purl.obolibrary.org/obo/nbo.owl|http://purl.obolibrary.org/obo/mondo.owl|http://purl.obolibrary.org/obo/ido.owl|http://purl.obolibrary.org/obo/foodon.owl|http://purl.obolibrary.org/obo/envo.owl|http://purl.obolibrary.org/obo/ecto.owl|http://purl.obolibrary.org/obo/cob.owl|http://purl.obolibrary.org/obo/apollo_sv.owl,,,,,,,,,process|process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"p is a process = Def. p is an occurrent that has temporal proper parts and for some time t, p s-depends_on some material entity at t. (axiom label in BFO2 Reference: [083-003])|An occurrent that has temporal proper parts and for some time t, p s-depends_on some material entity at t.|p is a process = Def. p is an occurrent that has temporal proper parts and for some time t, p s-depends_on some material entity at t. (axiom label in BFO2 Reference: [083-003])|An occurrent that has temporal proper parts and for some time t, p s-depends_on some material entity at t.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001640,specimen organism taxonomy (species),,This is the taxonomic species descriptor of a specimen isolate (an organism found within a specimen.),FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001640,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,specimen organism taxonomy (species),,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,This is the taxonomic species descriptor of a specimen isolate (an organism found within a specimen.),,,lookup,,,,,
http://purl.obolibrary.org/obo/GAZ_00067145,Reunion Region,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00067145,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Reunion Region,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00067142,Guadeloupe Region,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00067142,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Guadeloupe Region,http://purl.obolibrary.org/obo/GAZ_00003949,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00067144,French Guiana Region,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00067144,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,French Guiana Region,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00067143,Martinique Region,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00067143,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Martinique Region,http://purl.obolibrary.org/obo/GAZ_00003951,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00001999,marine water body,marine waterbody|body of marine water,A lentic water body which is composed primarily of marine water.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,marine waterbody|body of marine water,,,,ENVO:00001999,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,marine water body,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A lentic water body which is composed primarily of marine water.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0371,Latvian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0371,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Latvian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0378,New Zealander,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0378,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,New Zealander,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0374,Luxembourgish,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0374,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Luxembourgish,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0372,Liechtensteiner,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0372,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Liechtensteiner,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0370,Manx,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0370,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Manx,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0373,Lithuanian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0373,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Lithuanian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0379,Norfolk Islander,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0379,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Norfolk Islander,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0375,Maltese,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0375,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Maltese,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0377,Montenegrin,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0377,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Montenegrin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0376,Monegasque,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0376,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Monegasque,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102079,data steward contact name,,"PCDS: Enter the name of the individual responsible for managing and overseeing the data. As names can change when there is staff turnover, the position of the responsible individual can be provided instead.",FALSE,,,,,,,PCDS:data_steward_contact_name,,,,,,,"PCDS: Enter the name of the individual responsible for managing and overseeing the data. As names can change when there is staff turnover, the position of the responsible individual can be provided instead.",,,,,,,,,,,,,,PCDS: John Bloggs,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102079,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788,2026-04-13T17:18:02.461Z,,,,,,,,,,,,,,,,,,,data steward contact name,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://github.com/cidgoh/pathogen-genomics-package/issues/39,,,PCDS: The name of the data steward.,,,,,,
http://purl.obolibrary.org/obo/DOID_319,spinal cord disease,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:319,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,spinal cord disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102191,Poly(A) selection,,"A library selection process in which polyadenylated RNA molecules are selectively captured from a sample, typically using oligo(dT) probes, to enrich for messenger RNA.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102191,,,,,,,,,,,,,,2026-04-13T19:52:38.515Z,,,,,,,,,,,,,,,,,,,Poly(A) selection,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A library selection process in which polyadenylated RNA molecules are selectively captured from a sample, typically using oligo(dT) probes, to enrich for messenger RNA.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_26649,serine derivative,,"An amino acid derivative resulting from reaction of serine at the amino group or the carboxy group, or from the replacement of any hydrogen of serine by a heteroatom. The definition normally excludes peptides containing serine residues.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:26649,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,serine derivative,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An amino acid derivative resulting from reaction of serine at the amino group or the carboxy group, or from the replacement of any hydrogen of serine by a heteroatom. The definition normally excludes peptides containing serine residues.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001422,obsolete: laboratory sequencing datum,,A laboratory sequencing datum is a datum related to the sequencing assay process applied to an isolate.,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001422,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: laboratory sequencing datum,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,http://purl.obolibrary.org/obo/GENEPIO_0001681,,,A laboratory sequencing datum is a datum related to the sequencing assay process applied to an isolate.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000209,deciliter,dl|decilitre,A volume unit which is equal to one tenth of a liter or 10^[-1] L.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,dl|decilitre,,,,UO:0000209,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,deciliter,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A volume unit which is equal to one tenth of a liter or 10^[-1] L.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000208,gram per deciliter,gram per decilitre|g/dl,A mass density unit which is equal to mass of an object in grams divided by the volume in deciliters.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,gram per decilitre|g/dl,,,,UO:0000208,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,gram per deciliter,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A mass density unit which is equal to mass of an object in grams divided by the volume in deciliters.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000205,volume per unit volume,,A dimensionless concentration unit which denotes the given volume of the solute in the total volume of the resulting solution.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:0000205,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,volume per unit volume,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A dimensionless concentration unit which denotes the given volume of the solute in the total volume of the resulting solution.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002162,specimen collection site specification,,A specification for a geographic location that a specimen was collected at.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002162,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,specimen collection site specification,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/NCIT_C16632,,,,,,,,A specification for a geographic location that a specimen was collected at.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000026,beef sirloin tip (raw),,A raw beef sirloin tip cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000026,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef sirloin tip (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef sirloin tip cut.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0001166,pylorus,stomach pyloric region|pyloric region|pyloric part of stomach|pars pylorica gastricae|pars pylorica,"The stomach tissue region surrounding and controlling the distal outlet of the stomach, which opens into the duodenum.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:Pylorus|Wikipedia:Pylorus|VHOG:0000420|UMLS:C0034196|SCTID:362143006|NCIT:C12260|MESH:D011708|MA:0002560|GAID:333|FMA:14581|EMAPA:17631|EHDAA:4860|EHDAA2:0001580|BTO:0001146,,,,,,,,,,,,,,,,,,,,,,,,,stomach pyloric region|pyloric region|pyloric part of stomach|pars pylorica gastricae|pars pylorica,,,,UBERON:0001166,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,pylorus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The stomach tissue region surrounding and controlling the distal outlet of the stomach, which opens into the duodenum.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0001161,body of stomach,stomach body|gastric body|corpus gastricum (ventriculare),The body of stomach is the part of the stomach that lies between the fundus above and the pyloric antrum below; its boundaries are poorly defined[GO].,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:GastricCorpus|Wikipedia:Body_of_stomach|UMLS:C0227230|SCTID:362140009|NCIT:C12258|MA:0002559|FMA:14560|EMAPA:35810|BTO:0000505,,,,,,,,,,,,,,,,,,,,,,,,,stomach body|gastric body|corpus gastricum (ventriculare),,,,UBERON:0001161,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,body of stomach,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The body of stomach is the part of the stomach that lies between the fundus above and the pyloric antrum below; its boundaries are poorly defined[GO].,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0001163,lesser curvature of stomach,stomach lesser curvature,"The lesser curvature of the stomach, extending between the cardiac and pyloric orifices, forms the right or posterior border of the stomach. It descends as a continuation of the right margin of the esophagus in front of the fibers of the right crus of the diaphragm, and then, turning to the right, it crosses the first lumbar vertebra and ends at the pylorus. Nearer its pyloric than its cardiac end is a well-marked notch, the incisura angularis, which varies somewhat in position with the state of distension of the viscus; it serves to separate the stomach into a right and a left portion. The lesser curvature gives attachment to the two layers of the hepatogastric ligament, and between these two layers are the left gastric artery and the right gastric branch of the hepatic artery. [WP,unvetted].",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:LesserCurvatureOfStomach|Wikipedia:Lesser_curvature_of_stomach|UMLS:C0227221|SCTID:362133008|NCIT:C12261|MA:0001616|FMA:14572|EMAPA:37754,,,,,,,,,,,,,,,,,,,,,,,,,stomach lesser curvature,,,,UBERON:0001163,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,lesser curvature of stomach,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The lesser curvature of the stomach, extending between the cardiac and pyloric orifices, forms the right or posterior border of the stomach. It descends as a continuation of the right margin of the esophagus in front of the fibers of the right crus of the diaphragm, and then, turning to the right, it crosses the first lumbar vertebra and ends at the pylorus. Nearer its pyloric than its cardiac end is a well-marked notch, the incisura angularis, which varies somewhat in position with the state of distension of the viscus; it serves to separate the stomach into a right and a left portion. The lesser curvature gives attachment to the two layers of the hepatogastric ligament, and between these two layers are the left gastric artery and the right gastric branch of the hepatic artery. [WP,unvetted].",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0001160,fundus of stomach,stomach fundus|gastric fundus|fundus gastricus (ventricularis),"The fundus is the portion of the stomach that lies above the cardiac notch, and contains the fundic glands[GO, Kardong].",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:GastricFundus|Wikipedia:Fundus_(stomach)|VHOG:0000421|UMLS:C0017129|SCTID:362139007|NCIT:C12257|MESH:D005748|MA:0001612|GAID:320|FMA:14559|EMAPA:17886|EHDAA:4844|EHDAA2:0001919|EFO:0002554|BTO:0000502,,,,,,,,,,,,,,,,,,,,,,,,,stomach fundus|gastric fundus|fundus gastricus (ventricularis),,,,UBERON:0001160,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,fundus of stomach,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The fundus is the portion of the stomach that lies above the cardiac notch, and contains the fundic glands[GO, Kardong].",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0001164,greater curvature of stomach,stomach greater curvature,"The greater curvature of the stomach is directed mainly forward, and is four or five times as long as the lesser curvature. [WP,unvetted].",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:GreaterCurvatureOfStomach|Wikipedia:Greater_curvature_of_stomach|UMLS:C0227223|SCTID:362134002|NCIT:C12262|MA:0001615|FMA:14574|EMAPA:37753,,,,,,,,,,,,,,,,,,,,,,,,,stomach greater curvature,,,,UBERON:0001164,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,greater curvature of stomach,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The greater curvature of the stomach is directed mainly forward, and is four or five times as long as the lesser curvature. [WP,unvetted].",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0001165,pyloric antrum,antrum,"The area at the bottom of the stomach on the caudal side of the pyloric canal that contains gastrin-producing G cells, which stimulate acid production, and the luminal pH-sensitive population of somatostatin-producing D cells.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:PyloricAntrum|Wikipedia:Pyloric_antrum|UMLS:C0034193|SCTID:362142001|NCIT:C12259|MESH:D011706|MA:0001624|GAID:332|FMA:14579|EMAPA:17891|EFO:0002555|BTO:0001732,,,,,,,,,,,,,,,,,,,,,,,,antrum,stomach pyloric antrum|antrum of stomach,,,,UBERON:0001165,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,pyloric antrum,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The area at the bottom of the stomach on the caudal side of the pyloric canal that contains gastrin-producing G cells, which stimulate acid production, and the luminal pH-sensitive population of somatostatin-producing D cells.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0001162,cardia of stomach,stomach cardiac region|pars cardiaca gastricae|pars cardiaca (gaster)|gastric cardia|cardial part of stomach,"The part of the stomach attached to the esophagus. The cardia begins immediately distal to the z-line of the gastroeosphageal junction, where the squamous epithelium of the esophagus gives way to the columnar epithelium of the gastrointestinal tract[WP].",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Cardia|UMLS:C0007144|SCTID:362138004|NCIT:C12256|MESH:D002299|MA:0001609|GAID:319|FMA:14561|EMAPA:35811|BTO:0000198,,,,,,,,,,,,,,,,,,,,,,,UBERON:0004712,,stomach cardiac region|pars cardiaca gastricae|pars cardiaca (gaster)|gastric cardia|cardial part of stomach,,,,UBERON:0001162,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,cardia of stomach,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The part of the stomach attached to the esophagus. The cardia begins immediately distal to the z-line of the gastroeosphageal junction, where the squamous epithelium of the esophagus gives way to the columnar epithelium of the gastrointestinal tract[WP].",,,,,,,,
http://purl.obolibrary.org/obo/OMIT_0009882,Microbiological Techniques,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OMIT:0009882,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/omit.owl,,,,,,,,,Microbiological Techniques,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490158,textile or fabric bag,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0158,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490158,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,textile or fabric bag,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100437,food product origin geo loc name country,food_product_origin geo_loc_name (country)|food product origin geographical location country name|food product origin geo loc name (country),A data field which describes the country of origin of a food product.,FALSE,,,,,,,PCDS:food_product_origin_geo_loc_name_country,,,,,,,"PCDS: If a food product was sampled and the food product was manufactured outside of Canada, provide the name of the country where the food product originated by selecting a value from the template pick list. If the information is unknown or cannot be provided, leave blank or provide a null value.",,,,,,,,,,,,,,PCDS: United States of America [GAZ:00002459],,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,food_product_origin geo_loc_name (country)|food product origin geographical location country name|food product origin geo loc name (country),food product origin geographical location country name slot|food product origin geographical location country name field|food product origin geo loc name (country) slot,,,,GENEPIO:0100437,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,food product origin geo loc name country,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the country of origin of a food product.,,PCDS: The country of origin of a food product.,,,,,,
http://purl.obolibrary.org/obo/FOODON_00001248,fish food product,,A fish food product includes products made from any fish species (aquatic vertebrate with gills and fins).,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00001248,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,fish food product,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A fish food product includes products made from any fish species (aquatic vertebrate with gills and fins).,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001990,RNA-Seq strategy,,Random sequencing of whole transcriptome.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI SRA: RNA-Seq,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001990,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,RNA-Seq strategy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Random sequencing of whole transcriptome.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0000029,lymph node,,"Any of the rounded masses of lymphoid tissue that are surrounded by a capsule of connective tissue, are distributed along the lymphatic vessels, and contain numerous lymphocytes which filter the flow of lymph.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:Lymphnode|ZFA_RETIRED:0005318|Wikipedia:Lymph_node|VHOG:0001273|UMLS:C0024204|TAO_RETIRED:0005318|SCTID:181756000|NCIT:C33027|NCIT:C12745|MESH:D008198|MAT:0000442|MA:0000139|GAID:947|FMA:5034|EV:0100050|EMAPA:35523|EFO:0000872|CALOHA:TS-0579|BTO:0000784,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0000029,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Any of the rounded masses of lymphoid tissue that are surrounded by a capsule of connective tissue, are distributed along the lymphatic vessels, and contain numerous lymphocytes which filter the flow of lymph.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0000022,feather,,"One of the epidermal growths that form the distinctive outer covering, or plumage, on birds. Feathers are formed in tiny follicles in the epidermis, or outer skin layer, that produce keratin proteins.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Feather|SCTID:410027006|MESH:D005241|MAT:0000156|GAID:1214|EFO:0000955|BTO:0000447,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0000022,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,feather,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"One of the epidermal growths that form the distinctive outer covering, or plumage, on birds. Feathers are formed in tiny follicles in the epidermis, or outer skin layer, that produce keratin proteins.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0000020,sense organ,sensillum,An organ that is capable of transducing sensory stimulus to the nervous system.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WBbt:0006929|VHOG:0001407|UMLS:C0935626|SCTID:244485009|NCIT:C33224|MESH:D012679|MA:0000017|HAO:0000930|GAID:63|FBbt:00005155|EMAPA:35955|EHDAA:500|EHDAA2:0001824|CALOHA:TS-2043|BTO:0000202|BSA:0000121|AEO:0000094,,,,,,,,,,,,,,,,,,,,,,,,,sensory system organ|sensory organ system organ|sensory organ|sense organ system organ|organ of sensory system|organ of sensory organ system|organ of sense organ system,sensillum,,,UBERON:0000020,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,sense organ,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An organ that is capable of transducing sensory stimulus to the nervous system.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0000021,cutaneous appendage,epidermal appendage,"Anatomical projection that protrudes from the skin. Examples: hair, nail, feather, claw, hoof, horn, wattle, spur, beak, antler, bristle and some scales.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SCTID:276160000|FMA:71012|CALOHA:TS-0051,,,,,,,,,,,,,,,,,,,,,,,,,skin appendage,epidermal appendage,,,UBERON:0000021,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,cutaneous appendage,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Anatomical projection that protrudes from the skin. Examples: hair, nail, feather, claw, hoof, horn, wattle, spur, beak, antler, bristle and some scales.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0000025,tube,duct,Any hollow cylindrical anatomical structure containing a lumen through which substances are transported.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:Tube,,,,,,,,,,,,,,,,,,,,,,,,,anatomical tube,duct,,,UBERON:0000025,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,tube,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any hollow cylindrical anatomical structure containing a lumen through which substances are transported.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C28102,Disease Clinical Qualifier,Disease Clinical Qualifier,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Disease Clinical Qualifier,,,,NCIT:C28102,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Disease Clinical Qualifier,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_59999,chemical substance,,"A chemical substance is a portion of matter of constant composition, composed of molecular entities of the same type or of different types.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:59999,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,chemical substance,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A chemical substance is a portion of matter of constant composition, composed of molecular entities of the same type or of different types.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001105,metagenome assembly project,,Metagenome assembly: a genome assembly generated from sequenced environmental samples,FALSE,,,,,,,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/books/NBK54364/,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001105,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,metagenome assembly project,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,Metagenome assembly: a genome assembly generated from sequenced environmental samples,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0002128,Illumina Genome Analyzer,,"A DNA sequencer manufactured by Solexa as one of its first sequencer lines, launched in 2006, and capable of sequencing 1 gigabase (Gb) of data in a single run.",FALSE,,,,,,,Illumina Genome Analyzer I,,,,,,,,,,,,,,http://www.illumina.com/technology/next-generation-sequencing/solexa-technology.html,,,,,Illumina Genome Analyzer,,,,,http://purl.obolibrary.org/obo/IAO_0000125,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0002128,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Illumina Genome Analyzer,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Person: Chris Stoeckert, Jason Hilton",,,,"A DNA sequencer manufactured by Solexa as one of its first sequencer lines, launched in 2006, and capable of sequencing 1 gigabase (Gb) of data in a single run.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_36785,carbobicyclic compound,,A bicyclic compound in which all the ring atoms are carbon.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:36785,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,carbobicyclic compound,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A bicyclic compound in which all the ring atoms are carbon.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001866,3D coordinate system,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0001864,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001866,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,3D coordinate system,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490391,"plastic container, combined material",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0391,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490391,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"plastic container, combined material",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001588,other project objective,,Other project objective: specify an objective not listed above,FALSE,,,,,,,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/books/NBK54364/,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001588,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,other project objective,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,Other project objective: specify an objective not listed above,,,,other,,,,
http://purl.obolibrary.org/obo/UBERON_0006956,buccal mucosa,,The inner lining of the cheeks and lips.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C1578559|SCTID:16811007|NCIT:C12505|FMA:59785|CALOHA:TS-2349|BTO:0003833,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0006956,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,buccal mucosa,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The inner lining of the cheeks and lips.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_84186,L-proline derivative,,"A proteinogenic amino acid derivative resulting from reaction of <small>L</small>-proline at the amino group or the carboxy group, or from the replacement of any hydrogen of <small>L</small>-proline  by a heteroatom.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:84186,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,L-proline derivative,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A proteinogenic amino acid derivative resulting from reaction of <small>L</small>-proline at the amino group or the carboxy group, or from the replacement of any hydrogen of <small>L</small>-proline  by a heteroatom.",,,,,,,,
http://www.ebi.ac.uk/efo/EFO_0021781,age at initiation of corrective lens use,,"Age at initiation of the use of corrective lenses, such as glasses or contact lenses, to treat an abnormality of the eye.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,efo:EFO_0021781,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age at initiation of corrective lens use,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Age at initiation of the use of corrective lenses, such as glasses or contact lenses, to treat an abnormality of the eye.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510157,game as consumer,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0157,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510157,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,game as consumer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_51721,"alpha,beta-unsaturated ketone",,"A ketone of general formula R<small><sup>1</small></sup>R<small><sup>2</small></sup>C=CR<small><sup>3</small></sup>‒C(=O)R<small><sup>4</small></sup> (R<small><sup>4</small></sup> ≠ H) or R<small><sup>1</small></sup>C≡C‒C(=O)R<small><sup>2</small></sup> (R<small><sup>2</small></sup> ≠ H) in which the ketonic C=O function is conjugated to an unsaturated C-C bond at the α,β position.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:51721,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,"alpha,beta-unsaturated ketone",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A ketone of general formula R<small><sup>1</small></sup>R<small><sup>2</small></sup>C=CR<small><sup>3</small></sup>‒C(=O)R<small><sup>4</small></sup> (R<small><sup>4</small></sup> ≠ H) or R<small><sup>1</small></sup>C≡C‒C(=O)R<small><sup>2</small></sup> (R<small><sup>2</small></sup> ≠ H) in which the ketonic C=O function is conjugated to an unsaturated C-C bond at the α,β position.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000277,lamb loin,,A lamb cut that comes from the anatomical body location on either side of the spine that is located posterior to the Rack and anterior to the Sirloin or hip.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000277,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lamb loin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A lamb cut that comes from the anatomical body location on either side of the spine that is located posterior to the Rack and anterior to the Sirloin or hip.,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0015796,acute lung injury,,"A condition of lung damage that is characterized by bilateral pulmonary infiltrates (pulmonary edema) rich in neutrophils, and in the absence of clinical heart failure. This can represent a spectrum of pulmonary lesions, endothelial and epithelial, due to numerous factors (physical, chemical, or biological).",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SCTID:315345002|Orphanet:178320|NCIT:C155766|MedDRA:10069351|MESH:D055371|EFO:0004610,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MONDO:0015796,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#rare|http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar|http://purl.oboInOwllibrary.org/oboInOwl/mondo#orphanet_rare|http://purl.oboInOwllibrary.org/oboInOwl/mondo#ordo_disorder|http://purl.oboInOwllibrary.org/oboInOwl/mondo#ordo_clinical_situation,,,,,,,,acute lung injury,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A condition of lung damage that is characterized by bilateral pulmonary infiltrates (pulmonary edema) rich in neutrophils, and in the absence of clinical heart failure. This can represent a spectrum of pulmonary lesions, endothelial and epithelial, due to numerous factors (physical, chemical, or biological).",,,,,,,,
http://purl.obolibrary.org/obo/BFO_0000001,entity,,An entity is anything that exists or has existed or will exist.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://www.wikidata.org/wiki/Q35120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,BFO:0000001,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gsso.owl,,,,,,,,,entity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An entity is anything that exists or has existed or will exist.,,,,,,,,
http://purl.obolibrary.org/obo/OGMS_0000090,treatment,,"A planned process whose completion is hypothesized by a health care provider to eliminate, prevent, or alleviate a disorder, the signs and symptoms of a disorder, or a pathological process",FALSE,,,,,,,,,,,,,,,,,,,,,http://code.google.com/p/ogms/issues/detail?id=35,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OGMS:0000090,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ogms.owl,,,,,,,,,treatment,,,,,,,,,,,,,,,,,,,,,,,,,,,,Albert Goldfain,,,,"A planned process whose completion is hypothesized by a health care provider to eliminate, prevent, or alleviate a disorder, the signs and symptoms of a disorder, or a pathological process",,,,,,,,
http://purl.obolibrary.org/obo/OGMS_0000096,health care process,,"A planned process with the objective to improve the health status of a patient that directly involves the treatment, diagnosis, or prevention of disease or injury of a patient",FALSE,,,,,,,,,,,,,,,,,,,,,http://groups.google.com/group/ogms-discuss/browse_thread/thread/a2dbc2ed1dff99d6,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OGMS:0000096,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ogms.owl,,,,,,,,,health care process,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Albert Goldfain
Sagar Jain",,,,"A planned process with the objective to improve the health status of a patient that directly involves the treatment, diagnosis, or prevention of disease or injury of a patient",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_38770,cinnolines,,"Any  organic heteropolycyclic compound based on the 1,2-diaza analogue of naphthalene and its substituted derivatives.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:38770,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,cinnolines,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Any  organic heteropolycyclic compound based on the 1,2-diaza analogue of naphthalene and its substituted derivatives.",,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00002170,compost,,Manure which has been derived from the aerobically decomposed remnants of organic materials.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Compost,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00002170,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,compost,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Manure which has been derived from the aerobically decomposed remnants of organic materials.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00001132,swine food product,,"Suidae is a family of artiodactyl mammals which are commonly called pigs, hogs or boars. In addition to numerous fossil species, 17 extant species are currently recognized (or 18 counting domestic pigs and wild boars separately), classified into between four and eight genera. The family includes the domestic pig, Sus scrofa domesticus or Sus domesticus, in addition to numerous species of wild pig, such as babirusas and warthogs. All suids, or swine, are native to the Old World, ranging from Asia to Europe and Africa.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00001132,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,swine food product,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Suidae is a family of artiodactyl mammals which are commonly called pigs, hogs or boars. In addition to numerous fossil species, 17 extant species are currently recognized (or 18 counting domestic pigs and wild boars separately), classified into between four and eight genera. The family includes the domestic pig, Sus scrofa domesticus or Sus domesticus, in addition to numerous species of wild pig, such as babirusas and warthogs. All suids, or swine, are native to the Old World, ranging from Asia to Europe and Africa.",,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0564,Vis founder,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0564,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Vis founder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0561,Romanian founder,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0561,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Romanian founder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0560,Northern Finnish founder,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0560,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Northern Finnish founder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0568,African American,Black|Afro-American,Individuals who self-identify or are reported by authors as African American. Term used by some communities to describe themselves and some US government and other institutions on official forms used to collect demographic information.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Black|Afro-American,,,,HANCESTRO:0568,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,African American,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Individuals who self-identify or are reported by authors as African American. Term used by some communities to describe themselves and some US government and other institutions on official forms used to collect demographic information.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0567,Afro-Caribbean,negro|West Indian|Preto|Black Caribbean|Black|African Caribbean,Individuals who self-identify or are reported by authors as Afro-Caribbean. Term used by some communities to describe themselves and some US and UK government and other institutions on official forms used to collect demographic information.,FALSE,,,,,,,,,,,,,,It should be noted that the synonyms for this term represent the commonly used Spanish and Portugese translations of the primary label.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,negro|West Indian|Preto|Black Caribbean|Black|African Caribbean,,,,HANCESTRO:0567,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Afro-Caribbean,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Individuals who self-identify or are reported by authors as Afro-Caribbean. Term used by some communities to describe themselves and some US and UK government and other institutions on official forms used to collect demographic information.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0566,undefined ancestry population,,"Population for which insufficient information is available to allocate it to a specific ancestral group or which contain individuals from a range of known ancestry categories, eg American",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0566,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,undefined ancestry population,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Population for which insufficient information is available to allocate it to a specific ancestral group or which contain individuals from a range of known ancestry categories, eg American",,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0569,Talana,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0569,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Talana,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0563,South Tyrolean,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0563,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,South Tyrolean,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0565,Split founder,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0565,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Split founder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100933,sediment sampling,,A specimen collection process that is used to collect a sediment sample.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100933,,,,,,,,,,,,,https://orcid.org/0000-0001-5275-8866,2023-11-29T11:40:32Z,,,,,,,,,,,,,,,,,,,sediment sampling,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A specimen collection process that is used to collect a sediment sample.,,,,,,,,
http://purl.obolibrary.org/obo/OBA_2001029,age of onset of multiple sclerosis,age multiple sclerosis symptoms begin|age at onset of multiple sclerosis,The age at which multiple sclerosis manifestations first appear.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,age multiple sclerosis symptoms begin|age at onset of multiple sclerosis,,,,OBA:2001029,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age of onset of multiple sclerosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The age at which multiple sclerosis manifestations first appear.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490245,metal screw cap or lid,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0245,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490245,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,metal screw cap or lid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C168830,Mortality related to Stem Cell Treatment,Mortality related to Stem Cell Treatment,An indication that the mortality of the individual was related to the stem cell treatment.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Mortality related to Stem Cell Treatment,,,,NCIT:C168830,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Mortality related to Stem Cell Treatment,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An indication that the mortality of the individual was related to the stem cell treatment.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001497,test history item,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001497,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,test history item,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000248,lamb shoulder arm (raw),,A raw lamb shoulder arm cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000248,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lamb shoulder arm (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw lamb shoulder arm cut.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100634,State or Province or Territory,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"This ""or"" class is just to represent an equivalency with a commonly used classification, it should not have subclasses under it. (2022-12-22)",,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100634,,,,,,,,,,,,,http://orcid.org/0000-0002-9578-0788,2022-12-22T22:56:03.687Z,,,,,,,,,,,,,,,,,,,State or Province or Territory,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C106515,Dialysis Fluid,Dialysis Fluid|Dialysate|DIALYSIS FLUID,"The fluid which runs through a dialysis machine and captures, for discard or analysis, the excess water and waste from the blood stream through diffusion and ultrafiltration.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Dialysis Fluid|Dialysate|DIALYSIS FLUID,,,,NCIT:C106515,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Dialysis Fluid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The fluid which runs through a dialysis machine and captures, for discard or analysis, the excess water and waste from the blood stream through diffusion and ultrafiltration.",,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0002494,substance-related disorder,substance-related disorder|substance induced mood disorders,"A category of psychiatric disorders which include disorders related to the taking of a drug of abuse (including alcohol, prescribed medications and recreational drugs).",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0236969|NCIT:C92203|MESH:D019966|MEDGEN:66746|ICD10CM:F10-F19|DOID:303,,,,,,,,,,,,,,,,,,,,,,,,,substance-related disorder|substance induced mood disorders,,,,MONDO:0002494,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,substance-related disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A category of psychiatric disorders which include disorders related to the taking of a drug of abuse (including alcohol, prescribed medications and recreational drugs).",,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000626,drylot,,A drylot is an enclosure of limited size usually bare of vegetation and used for fattening livestock.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01000626,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,drylot,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A drylot is an enclosure of limited size usually bare of vegetation and used for fattening livestock.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510043,low in cholesterol claim,,"Food having 20 miligrams or less cholesterol per amount customarily consumed (and per 50 grams of food if the amount customarily consumed is small). Meals and main dishes contain 20 milligrams or less cholesterol per 100 grams of food. If the food qualifies by special processing and total fat exceeds 13 grams per amount and labeled serving, the amount of cholesterol must be 'substantially less' (25%) than in a comparable food with significant market share (5% of market).",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0043,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510043,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,low in cholesterol claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Food having 20 miligrams or less cholesterol per amount customarily consumed (and per 50 grams of food if the amount customarily consumed is small). Meals and main dishes contain 20 milligrams or less cholesterol per 100 grams of food. If the food qualifies by special processing and total fat exceeds 13 grams per amount and labeled serving, the amount of cholesterol must be 'substantially less' (25%) than in a comparable food with significant market share (5% of market).",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_33636,bicyclic compound,,A molecule that features two fused rings.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:33636,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,bicyclic compound,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A molecule that features two fused rings.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0000696,AB SOLiD System,,is a DNA sequencer which is manufactured by Applied Biosystems and which enable DNA sequencing by ligation,FALSE,,,,,,,,,,,,,,,,,,,,,Applied Biosystems,,,,,AB SOLiD System,,"PMID: 19336255. RNA-Seq-quantitative measurement of expression through massively parallel RNA-sequencing. Wilhelm BT, Landry JR. Methods. 2009 Jul;48(3):249-57.",,,http://purl.obolibrary.org/obo/IAO_0000120,NCBI SRA: AB SOLiD System,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0000696,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AB SOLiD System,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra,,,,is a DNA sequencer which is manufactured by Applied Biosystems and which enable DNA sequencing by ligation,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C27551,Disorder by Site,Disorder by Site|Disease by Site,A term that refers to the classification of a disorder according to the anatomic site that is involved in the pathologic process.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Disorder by Site|Disease by Site,,,,NCIT:C27551,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Disorder by Site,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A term that refers to the classification of a disorder according to the anatomic site that is involved in the pathologic process.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001050,animal related exposure event,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001050,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,animal related exposure event,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001890,obsolete: US postal code,,"A ""USA zip code"" is a five digit (Zone Improvement Plan) or 9 digit postal code pertaining to a region of the United States of America. The optional trailing 4 digits of a 9 digit zip code provide greater granularity of delivery target.",TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001890,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: US postal code,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,http://purl.obolibrary.org/obo/NCIT_C25720,,,"A ""USA zip code"" is a five digit (Zone Improvement Plan) or 9 digit postal code pertaining to a region of the United States of America. The optional trailing 4 digits of a 9 digit zip code provide greater granularity of delivery target.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100839,urinary contamination unit,urinary contamination unit,An environmental data field which describes the units of a measurement of urinary contamination.,FALSE,,,,,,,PCDS:urinary_contamination_unit,,,,,,,PCDS: Provide the units of the measured urinary contamination.,,,,,,,,,,,,,,PCDS: nanograms per liter,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,urinary contamination unit,urinary contamination unit slot,,,,GENEPIO:0100839,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,urinary contamination unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the units of a measurement of urinary contamination.,,PCDS: The units of a measurement of urinary contamination.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100930,soil sample probe,,A specimen collection device designed to penetrate soil with a hollow tube to collect soil sample cores.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100930,,,,,,,,,,,,,https://orcid.org/0000-0001-5275-8866,2023-11-29T12:15:31Z,,,,,,,,,,,,,,,,,,,soil sample probe,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A specimen collection device designed to penetrate soil with a hollow tube to collect soil sample cores.,,,,,,,,
http://purl.obolibrary.org/obo/BTO_0000353,lung cell line,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,BTO:0000353,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/bto.owl,,,,,,,,,lung cell line,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001016,obsolete: cafeteria,,"A cafeteria is a type of food service location in which there is little or no waiting staff table service, whether a restaurant or within an institution such as a large office building or school.",TRUE,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Cafeteria,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001016,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: cafeteria,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,http://purl.obolibrary.org/obo/ENVO_01000969,,,"A cafeteria is a type of food service location in which there is little or no waiting staff table service, whether a restaurant or within an institution such as a large office building or school.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0015757,heterogeneous tissue,portion of heterogeneous tissue,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:62798,,,,,,,,,,,,,,,,,,,,,,,,,portion of heterogeneous tissue,,,,UBERON:0015757,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,heterogeneous tissue,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000112,GSCID-BRC Core Project standard,,A Core Project item is a field in the GSCID/BRC Project and Sample Application Core Project Standard.,FALSE,,,,,,,,,,,,,,,,,,,,,https://www.niaid.nih.gov/research/dmid-metadata-standards-core-project,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000112,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GSCID-BRC Core Project standard,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A Core Project item is a field in the GSCID/BRC Project and Sample Application Core Project Standard.,,,,,,,,
http://www.ebi.ac.uk/efo/EFO_0000246,age,,"A temporal measurement of the time period elapsed since an identifiable point in the life cycle of an organism. If a developmental stage is specified, the identifiable point would be the beginning of that stage. Otherwise the identifiable point must be specified such as planting (e.g. 3 days post planting).",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/PATO_0000011|SNOMEDCT:397669002|NCIt:C25150|MO:467,,,,,,,,,,,,,,,,,,,,,,,,,,,,,efo:EFO_0000246,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age,,,,,,,,,,,,,,,,,,,,,,,,,,,,Tomasz Adamusiak|Jie Zheng|James Malone,,,,"A temporal measurement of the time period elapsed since an identifiable point in the life cycle of an organism. If a developmental stage is specified, the identifiable point would be the beginning of that stage. Otherwise the identifiable point must be specified such as planting (e.g. 3 days post planting).",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001851,recorded,,A categorical choice indicating that a datum is available for retrieval.,FALSE,,,,,,,,,,,,,,In theory any datum that has a recorded value has 'recorded' for its datum status.,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001851,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,recorded,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A categorical choice indicating that a datum is available for retrieval.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001293,sequence record,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001293,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,sequence record,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_1025,tuberculoid leprosy,,A leprosy that results in one erythematous large plaque with well-defined borders that are elevated and that slope down into an atrophic center.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:1025,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,tuberculoid leprosy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A leprosy that results in one erythematous large plaque with well-defined borders that are elevated and that slope down into an atrophic center.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100330,NCBI SRA filename2,filename4|filename3,"A filename that denotes an additional data file associated with the same sequencing library submission to the National Center for Biotechnology Information (NCBI) Sequence Read Archive (SRA) as filename, used when multiple files correspond to an identical combination of sample, library, sequencing strategy, layout, and instrument model.",FALSE,,,,,,,PCDS:ncbi_sra_filename2,,,,,,,PCDS: Provide the appropriate filename recorded in the Bioinformatics and QC metrics section.,,,,,,,,,,,"These metadata fields are defined specifically for use with the NCBI SRA submission template. They are organizational constructs intended to support a particular template and underlying database and should not be reused to model metadata outside the intended context. Where possible, more general, template‑independent terms should be used instead.",,,PCDS: SARSCoV2_NP_Sample123_R2.fastq.gz,,,requires discussion,,,,,,,,,,,,,,,,,filename4|filename3,,,,,,,,filename,filename2|NCBI SRA filename2,,,,GENEPIO:0100330,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788,2026-01-28T20:28:47.344Z,,,,,,,,,,,,,,,,,,,NCBI SRA filename2,,,,,,,,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/core/assets/sra/files/SRA_metadata_acc_example.xlsx,,,,,,,,,,"A filename that denotes an additional data file associated with the same sequencing library submission to the National Center for Biotechnology Information (NCBI) Sequence Read Archive (SRA) as filename, used when multiple files correspond to an identical combination of sample, library, sequencing strategy, layout, and instrument model.",,PCDS: See NCBI SRA template for details.,,,,,,
http://purl.obolibrary.org/obo/HP_0033771,Pleuritic chest pain,,"Pleuritic chest pain is characterized by sudden and intense sharp, stabbing, or burning pain in the chest when inhaling and exhaling.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0033771,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Pleuritic chest pain,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Pleuritic chest pain is characterized by sudden and intense sharp, stabbing, or burning pain in the chest when inhaling and exhaling.",,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_33554,Carnivora,,,FALSE,,,,,,,carnivores,,,,,,,,,,,,,,,,,,,Carnivora,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:33554,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Carnivora,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_23443,cyclic amide,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:3990,,,,,,CHEBI:23443,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,cyclic amide,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_1116,pertussis,,"A commensal bacterial infectious disease that results_in inflammation located_in respiratory tract, has_material_basis_in Bordetella pertussis, or has_material_basis_in Bordetella parapertussis, which produce toxins that paralyze the cilia of the respiratory epithelial cells. The infection is characterized by a prolonged, high-pitched, deeply indrawn breath (whoop).",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:1116,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,pertussis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A commensal bacterial infectious disease that results_in inflammation located_in respiratory tract, has_material_basis_in Bordetella pertussis, or has_material_basis_in Bordetella parapertussis, which produce toxins that paralyze the cilia of the respiratory epithelial cells. The infection is characterized by a prolonged, high-pitched, deeply indrawn breath (whoop).",,,,,,,,
http://purl.obolibrary.org/obo/DOID_11162,respiratory failure,,A lung disease characterized by inadequate gas exchange by the respiratory system.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:11162,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,respiratory failure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A lung disease characterized by inadequate gas exchange by the respiratory system.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02021135,piece of lamb (raw),,A raw piece of lamb.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02021135,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of lamb (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw piece of lamb.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100946,horizontal grab sampling device,,"A grab sampler in which the container for the sample is mounted on the end of a rod, which is suitable for collecting discharge from a pipe or truck.",FALSE,,,,,,,horizontal grab sampler,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100946,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-11-20T16:24:25Z,,,,,,,,,,,,,,,,,,,horizontal grab sampling device,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A grab sampler in which the container for the sample is mounted on the end of a rod, which is suitable for collecting discharge from a pipe or truck.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0008836,liver bud,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,BTO:0001642,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0008836,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,liver bud,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0008835,hepatic diverticulum,liver diverticulum,"An out-pocket of thickened ventral foregut epithelium adjacent to the developing heart. Constitutes the first morphological sign of the embryonic liver. The anterior portion of the hepatic diverticulum gives rise to the liver and intrahepatic biliary tree, while the posterior portion forms the gall bladder and extrahepatic bile ducts.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,XAO:0000101|Wikipedia:Hepatic_diverticulum|UMLS:C1512407|NCIT:C34187|EHDAA:1530|EHDAA2:0000740|AAO:0011057,,,,,,,,,,,,,,,,,,,,,,,,,liver diverticulum,,,,UBERON:0008835,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,hepatic diverticulum,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An out-pocket of thickened ventral foregut epithelium adjacent to the developing heart. Constitutes the first morphological sign of the embryonic liver. The anterior portion of the hepatic diverticulum gives rise to the liver and intrahepatic biliary tree, while the posterior portion forms the gall bladder and extrahepatic bile ducts.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000104,obsolete: INSDC MDM standard,,"The INDISC consortium ""Minimum data for Matching"" standard aims to define a format to capture reads and minimum metadata.  It is developed by the ""Repository and storage of sequence and meta-data"" workgroup 2.  It is used in the Global Microbial Identifier platform.",TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000104,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: INSDC MDM standard,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,http://purl.obolibrary.org/obo/GENEPIO_0000036,,,"The INDISC consortium ""Minimum data for Matching"" standard aims to define a format to capture reads and minimum metadata.  It is developed by the ""Repository and storage of sequence and meta-data"" workgroup 2.  It is used in the Global Microbial Identifier platform.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100311,specimen processing details,specimen processing details,A data field which describes detailed information regarding the processing applied to a sample during or after receiving the sample.,FALSE,,,,,,,PCDS:specimen_processing_details,,,,,,,PCDS: Briefly describe the processes applied to the sample.,,,,,,,,,,,,,,PCDS: Multiple amplicons generated for isolate SA32 using different primer sets,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,specimen processing details,specimen processing details slot,,,,GENEPIO:0100311,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,specimen processing details,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes detailed information regarding the processing applied to a sample during or after receiving the sample.,,PCDS: The details of the processing applied to the sample during or after receiving the sample.,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000813,astronomical body part,,A material part of an astronomical body.,FALSE,,,,,,,,,,,,,,"Material parts of astronomical bodies generally have boundaries formed by discontinuities in qualities, composition, or other physical characterisitcs. These boundaries are sometimes sharp, and sometimes diffuse, with different classification systems and communities declaring varying thresholds (e.g. for where a shoreline, forest, or other entity begins and ends). However, some boundaries are declared by fiat - that is, by arbitrary human convention or decree - particularly by regulatory or other authorities and communities of practice. The classes in this hierarchy attempt to offer generalisable definitions that allow multiple classfiication systems to map to and interoperate through. If desired, we can create classes that declare thresholds used by a given authority or community under the more generic ones, annotated with source information.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01000813,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl|http://purl.obolibrary.org/obo/cob.owl,envoPolar|envoAstro,,,,,,,,geophysical entity|astronomical body part,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A material part of an astronomical body.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0004325,MGI platform,,A sequencing platform provided by the MGI company.,FALSE,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/MGI_(company),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0004325,,,,,,,,,,,,,https://orcid.org/0000-0001-5275-8866,2022-09-23T11:43:21Z,,,,,,,,,,,,,,,,,,,MGI platform,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A sequencing platform provided by the MGI company.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0015453,subcutaneous lymph node,,A lymph node that is part of a hypodermis.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MA:0003028,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0015453,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,subcutaneous lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A lymph node that is part of a hypodermis.,,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000228,ordinal variable,,ordinal variable is a categorical variable where  the discrete possible values are ordered or  correspond to an implicit ranking,FALSE,,,,,,,ranked variable,,,,,,,,,,,,,,http://udel.edu/~mcdonald/statvartypes.html,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000228,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,ordinal variable,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra|Alejandra Gonzalez-Beltan|Orlaith Burke|Alejandra Gonzalez-Beltran,,,,ordinal variable is a categorical variable where  the discrete possible values are ordered or  correspond to an implicit ranking,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_35568,mancude ring,,Any molecular entity that consists of a ring having (formally) the maximum number of noncumulative double bonds.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:35568,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,mancude ring,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any molecular entity that consists of a ring having (formally) the maximum number of noncumulative double bonds.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_35295,homopolycyclic compound,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:35295,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,homopolycyclic compound,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0020590,mycobacterial infectious disease,mycobacterium infection|mycobacteriosis|mycobacterial infection,Infection due to organisms from the genus Mycobacteria.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0026918|SCTID:88415009|NCIT:C26831|MESH:D009164|MEDGEN:6479,,,,,,,,,,,,,,,,,,,,,,,,,mycobacterium infection|mycobacteriosis|mycobacterial infection,,,,MONDO:0020590,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,mycobacterial infectious disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Infection due to organisms from the genus Mycobacteria.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0101080,AMR analysis report filename,AMR analysis report filename,A data field which describes the filename of the report containing the results of an in silico antimicrobial resistance identification or analysis.,FALSE,,,,,,,PCDS:amr_analysis_report_filename,,,,,,,PCDS: Provide the filename of the report containing the results of the AMR analysis.,,,,,,,,,,,,,,PCDS: WWAMR_report_Feb1_2024.doc,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,AMR analysis report filename,AMR analysis report filename slot,,,,GENEPIO:0101080,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,AMR analysis report filename,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the filename of the report containing the results of an in silico antimicrobial resistance identification or analysis.,,PCDS: The filename of the report containing the results of an in silico antimicrobial resistance analysis.,,,,,,
http://purl.obolibrary.org/obo/ENVO_01001886,landform,,A solid astronomical body part which has been formed from and is composed primarily of the matter of that astronomical body.,FALSE,,,,,,,,,,,,,,"Landforms may be natural or anthropogenic. This term has often has loose usage when referencing entities which are either subterranean or submerged below water bodies. In some cases, oceans themselves are considered landforms. Here, we have provided subclasses to resolve this ambiguity, but place oceans and other water bodies elsewhere.In later revisions, this hiearchy is likely to be reordered based on the formation processes of the entities within it.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01001886,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,landform,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A solid astronomical body part which has been formed from and is composed primarily of the matter of that astronomical body.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C26324,Non-Neoplastic Hematopoietic and Lymphoid Cell Disorder,nonmalignant hematologic disorder|Non-Neoplastic Hematopoietic and Lymphoid Cell Disorder|Non-Neoplastic Hematologic and Lymphoid Cell Disorder|Non-Neoplastic Hematologic and Lymphocytic Disorder|Non-Malignant Hematologic and Lymphocytic Disorder,A non-neoplastic disorder that arises from hematopoietic and lymphoid cells. It is characterized by the absence of a clonal cellular component. It rarely progresses to a malignant neoplasm.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,nonmalignant hematologic disorder|Non-Neoplastic Hematopoietic and Lymphoid Cell Disorder|Non-Neoplastic Hematologic and Lymphoid Cell Disorder|Non-Neoplastic Hematologic and Lymphocytic Disorder|Non-Malignant Hematologic and Lymphocytic Disorder,,,,NCIT:C26324,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Non-Neoplastic Hematopoietic and Lymphoid Cell Disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A non-neoplastic disorder that arises from hematopoietic and lymphoid cells. It is characterized by the absence of a clonal cellular component. It rarely progresses to a malignant neoplasm.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100265,veterinarian role,,A role inhering in a person that is realized when the bearer is a professional who practices veterinary medicine.,FALSE,,,,,,,Veterinarian,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Veterinarian,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100265,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,veterinarian role,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A role inhering in a person that is realized when the bearer is a professional who practices veterinary medicine.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510056,sugars free food,,"A claim that a food is sugars-free, and any claim likely to have the same meaning for the consumer, may only be made where the product contains no more than 0,5 g of sugars per 100 g or 100 ml [REGULATION (EC) No 1924/2006 Corrigendum 2007-01-18].

Food having less than 0.5 grams sugars per amount customarily consumed (or for meals and main dishes, less than 0.5 grams sugars per labeled serving). Such foods nust contain no ingredient that is a sugar or generally understood to contain sugars except where the ingredient listed is footnoted '*adds a trivial amount of sugars' [US FDA]",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0056,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510056,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,sugars free food,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A claim that a food is sugars-free, and any claim likely to have the same meaning for the consumer, may only be made where the product contains no more than 0,5 g of sugars per 100 g or 100 ml [REGULATION (EC) No 1924/2006 Corrigendum 2007-01-18].

Food having less than 0.5 grams sugars per amount customarily consumed (or for meals and main dishes, less than 0.5 grams sugars per labeled serving). Such foods nust contain no ingredient that is a sugar or generally understood to contain sugars except where the ingredient listed is footnoted '*adds a trivial amount of sugars' [US FDA]",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001813,ITIS,,"The Integrated Taxonomic Information System (ITIS) contains authoritative taxonomic information on plants, animals, fungi, and microbes of North America and the world.",FALSE,,,,,,,Integrated Taxonomic Information System,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,ITIS,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001813,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ITIS,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,http://www.itis.gov,,"The Integrated Taxonomic Information System (ITIS) contains authoritative taxonomic information on plants, animals, fungi, and microbes of North America and the world.",,,,,,,,
http://purl.obolibrary.org/obo/OMIT_0009969,Investigative Techniques,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OMIT:0009969,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/omit.owl,,,,,,,,,Investigative Techniques,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C25191,Person Name,Person.name|Person Name|Name of Person|Name|Individual's Name|Human Name|Contact Name,A word or group of words indicating the identity of a person usually consisting of a first (personal) name and a last (family) name with an optional middle name. In some cultural traditions the family name comes first.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Person.name|Person Name|Name of Person|Name|Individual's Name|Human Name|Contact Name,,,,NCIT:C25191,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Person Name,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A word or group of words indicating the identity of a person usually consisting of a first (personal) name and a last (family) name with an optional middle name. In some cultural traditions the family name comes first.,,,,,,,,
http://purl.obolibrary.org/obo/CHMO_0000993,portion of material,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHMO:0000993,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,portion of material,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C21514,Temporal Qualifier,Temporal Qualifier,Terms used to indicate units of time or other terms associated with time.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Temporal Qualifier,,,,NCIT:C21514,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Temporal Qualifier,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Terms used to indicate units of time or other terms associated with time.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00003176,"populated place, Uruguay",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00003176,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Uruguay",http://purl.obolibrary.org/obo/GAZ_00002930,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_33252,atomic nucleus,,"A nucleus is the positively charged central portion of an atom, excluding the orbital electrons.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:33252,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/cob.owl,,,,,,,,,atomic nucleus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A nucleus is the positively charged central portion of an atom, excluding the orbital electrons.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03500026,mylar surface,,Trade name of polyester used in the usa.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=N0026,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03500026,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,mylar surface,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Trade name of polyester used in the usa.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03430116,divided into halves,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=E0116,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03430116,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,divided into halves,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/COB_0000011,atom,,A material entity consisting of exactly one atomic nucleus and the electron(s) orbiting it.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,COB:0000011,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/cob.owl,,,,,,,,,atom,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A material entity consisting of exactly one atomic nucleus and the electron(s) orbiting it.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0009880,carpal skeleton,skeleton of carpus|skeletal parts of fore mesopodium|ossa carpi|fore mesopodium skeleton|fore mesopodial skeleton|carpal bones set|carpal bones,Subdivision of skeleton that consists of the endochondral elements distal to the anterior limb/fin zeugopodial skeletal elements which constitute the proximal region of the anterior autopod skeleton[PHENOSCAPE:ad].,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://palaeos.com/vertebrates/glossary/images/382x366xUnciform1.jpg.pagespeed.ic.NirdxtwNVu.jpg|XAO:0003207|Wikipedia:Carpus|VSAO:0005023|VHOG:0001161|MA:0000040|FMA:71335|AAO:0000201,,,,,,,,,,,,,,,,,,,,,,,,,skeleton of carpus|skeletal parts of fore mesopodium|ossa carpi|fore mesopodium skeleton|fore mesopodial skeleton|carpal bones set|carpal bones,,,,UBERON:0009880,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,carpal skeleton,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Subdivision of skeleton that consists of the endochondral elements distal to the anterior limb/fin zeugopodial skeletal elements which constitute the proximal region of the anterior autopod skeleton[PHENOSCAPE:ad].,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000141,beef tenderloin roast,,A roast cut from the larger tenderloin.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000141,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef tenderloin roast,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A roast cut from the larger tenderloin.,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0005108,viral infectious disease,"viral infection|viral disorder|viral disease|infection, viral|Viruses infectious disease|Viruses infection|Viruses disease or disorder|Viruses caused disease or disorder",Any disease caused by a virus.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SCTID:34014006|NCIT:C3439|MESH:D014777|ICD9:079.99|ICD9:078.89|ICD9:066.9|ICD9:060-066|EFO:0000763|DOID:934,,,,,,,,,,,,,,,,,,,,,,,,,"viral infection|viral disorder|viral disease|infection, viral|Viruses infectious disease|Viruses infection|Viruses disease or disorder|Viruses caused disease or disorder",,,,MONDO:0005108,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,viral infectious disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any disease caused by a virus.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530208,outdoor/open-air plant cultivation,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0208,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530208,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,outdoor/open-air plant cultivation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470177,food micro-filtration,,"Microfiltration is used to remove undesirable micro-organisms and molecules. The membranes have pore diameters from 10 to 10000 nm. Micro-filtration is often used instead of pateurisation, e.g. in the brewing industry.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0177,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470177,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food micro-filtration,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Microfiltration is used to remove undesirable micro-organisms and molecules. The membranes have pore diameters from 10 to 10000 nm. Micro-filtration is often used instead of pateurisation, e.g. in the brewing industry.",,,,,,,,
http://purl.obolibrary.org/obo/COB_0000502,characteristic,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,COB:0000502,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/cob.owl,,,,,,,,,characteristic,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02010314,animal roast (boneless),,A boneless animal roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02010314,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,animal roast (boneless),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A boneless animal roast.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0302884,extraction,,A material separation in which a desired component of an input material is separated from the remainder,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Current the output of material processing defined as the molecular entity, main component in the output material entity, rather than the material entity that have grain molecular entity. 
'nucleic acid extract' is the output of 'nucleic acid extraction' and has grain 'nucleic acid'. However, the output of 'nucleic acid extraction' is 'nucleic acid' rather than 'nucleic acid extract'. We are aware of this issue and will work it out in the future.",extraction,,nucleic acid extraction using phenol chloroform,,,http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0302884,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,extraction,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra|Person:Bjoern Peters,,,,A material separation in which a desired component of an input material is separated from the remainder,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00007859,"populated place, Sudan",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00007859,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Sudan",http://purl.obolibrary.org/obo/GAZ_00000560,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530027,sirloin,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0027,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530027,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,sirloin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000405,piece of beef (boneless),,A piece of boneless beef.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000405,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of beef (boneless),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A piece of boneless beef.,,,,,,,,
http://semanticscience.org/resource/SIO_000505,polygon,,"In elementary geometry, a polygon is a plane figure that is bounded by a finite chain of straight line segments closing in a loop to form a closed chain or circuit.",FALSE,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Polygon,,,,,,,,,http://semanticscience.org/resource/SIO_000501,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,resource:SIO_000505,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,polygon,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"In elementary geometry, a polygon is a plane figure that is bounded by a finite chain of straight line segments closing in a loop to form a closed chain or circuit.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000191,beef brisket flat half,,A beef cut that is the leaner half of the whole brisket.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000191,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef brisket flat half,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A beef cut that is the leaner half of the whole brisket.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0010363,endochondral element,endochondral replacement element,"A skeletal element that has the potential to participate in endochondral ossification, and may participate in intramembranous ossification.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ZFA:0005620|XAO:0004017|VSAO:0000139,,,,,,,,,,,,,,,,,,,,,,,,,endochondral replacement element,,,,UBERON:0010363,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,endochondral element,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A skeletal element that has the potential to participate in endochondral ossification, and may participate in intramembranous ossification.",,,,,,,,
http://purl.obolibrary.org/obo/GO_0008150,biological process,physiological process|biological process,"Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.|A process that emerges from two or more causally-connected macromolecular activities and has evolved to achieve a biological objective.|A biological process represents a specific objective that the organism is genetically programmed to achieve. Biological processes are often described by their outcome or ending state, e.g., the biological process of cell division results in the creation of two daughter cells (a divided cell) from a single parent cell. A biological process is accomplished by a particular set of molecular functions carried out by specific gene products (or macromolecular complexes), often in a highly regulated manner and in a particular temporal sequence.|A biological process is the execution of a genetically-encoded biological module or program. It consists of all the steps required to achieve the specific biological objective of the module. A biological process is accomplished by a particular set of molecular functions carried out by specific gene products (or macromolecular complexes), often in a highly regulated manner and in a particular temporal sequence.",FALSE,,,,,,,,,,,,,,"Note that, in addition to forming the root of the biological process ontology, this term is recommended for use for the annotation of gene products whose biological process is unknown. When this term is used for annotation, it indicates that no information was available about the biological process of the gene product annotated as of the date the annotation was made; the evidence code 'no data' (ND), is used to indicate this.|Note that, in addition to forming the root of the biological process ontology, this term is recommended for the annotation of gene products whose biological process is unknown. When this term is used for annotation, it indicates that no information was available about the biological process of the gene product annotated as of the date the annotation was made; the evidence code 'no data' (ND), is used to indicate this.|A biological process is an evolved process",,,,,,,,,,,,,,,,,,Wikipedia:Biological_process|NCIt:C17828|MESH:D055705|GO:0008150,,,,,,,,,,,,,,,,,,,,,,,GO:0044699|GO:0007582|GO:0000004,,physiological process|biological process,,,,GO:0008150,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl|http://purl.obolibrary.org/obo/pco.owl|http://purl.obolibrary.org/obo/nbo.owl|http://purl.obolibrary.org/obo/go.owl|http://purl.obolibrary.org/obo/apollo_sv.owl,http://purl.oboInOwllibrary.org/oboInOwl/go#goslim_yeast|http://purl.oboInOwllibrary.org/oboInOwl/go#goslim_pombe|http://purl.oboInOwllibrary.org/oboInOwl/go#goslim_plant|http://purl.oboInOwllibrary.org/oboInOwl/go#goslim_pir|http://purl.oboInOwllibrary.org/oboInOwl/go#goslim_metagenomics|http://purl.oboInOwllibrary.org/oboInOwl/go#goslim_generic|http://purl.oboInOwllibrary.org/oboInOwl/go#goslim_chembl|http://purl.oboInOwllibrary.org/oboInOwl/go#goslim_candida|http://purl.oboInOwllibrary.org/oboInOwl/go#goslim_aspergillus,,,,,,,,biological_process|biological process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.|A process that emerges from two or more causally-connected macromolecular activities and has evolved to achieve a biological objective.|A biological process represents a specific objective that the organism is genetically programmed to achieve. Biological processes are often described by their outcome or ending state, e.g., the biological process of cell division results in the creation of two daughter cells (a divided cell) from a single parent cell. A biological process is accomplished by a particular set of molecular functions carried out by specific gene products (or macromolecular complexes), often in a highly regulated manner and in a particular temporal sequence.|A biological process is the execution of a genetically-encoded biological module or program. It consists of all the steps required to achieve the specific biological objective of the module. A biological process is accomplished by a particular set of molecular functions carried out by specific gene products (or macromolecular complexes), often in a highly regulated manner and in a particular temporal sequence.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100766,sample collection time duration value,,A data field which describes the amount of time over which the sample was collected.,FALSE,,,,,,,PCDS:sample_collection_time_duration_value,,,,,,,PCDS: Provide the numerical value of time.,,,,,,,,,,,,,,PCDS: 4,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100766,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-21T01:14:47.111Z,,,,,,,,,,,,,,,,,,,sample collection time duration value,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the amount of time over which the sample was collected.,,PCDS: The amount of time over which the sample was collected.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000156,project data type,,A general label indicating the primary study goal. These are only relevant for Primary submission projects (not Umbrella projects).,FALSE,,,,,,,,,,,,,,"Damion Dooley's note: According to http://trace.ddbj.nig.ac.jp/news/2014-11-12_e.html, ""A BioProject record can have multiple project data types""",,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000156,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,project data type,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A general label indicating the primary study goal. These are only relevant for Primary submission projects (not Umbrella projects).,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002131,virulence testing protocol name,,The laboratory protocol used to determine virulence phenotypes and markers.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002131,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IDO_0000547,,,,,,virulence testing protocol name,,,,,,,,,,,,,,,,,,,,,,,,,,,,Emma Griffiths,,,,The laboratory protocol used to determine virulence phenotypes and markers.,,,"help:The protocol for determining virulence should include, when applicable, inoculum preparation, platforms and instrumentation, conditions, cell lines and animal models.",,,,,
http://purl.obolibrary.org/obo/CHEBI_36416,mancude organic heterotricyclic parent,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:36416,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,mancude organic heterotricyclic parent,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000932,nursing home,skilled nursing facility|long-term care facility|intermediate care facility|old people's home,A building in which nursing aides and skilled nurses provide care and treatment to residents who have significant difficulty coping with the required activities of daily living.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,skilled nursing facility|long-term care facility|intermediate care facility|old people's home,rest home|convalescent home|care home,,,,ENVO:01000932,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,nursing home,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A building in which nursing aides and skilled nurses provide care and treatment to residents who have significant difficulty coping with the required activities of daily living.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0001707,nasal cavity,olfactory chamber cavity|nasal fossa|nasal conduit space|nasal canal|cavity of olfactory apparatus|cavity of nose,"An anatomical cavity that is part of the olfactory apparatus. This includes the space bounded anteriorly by the nares and posteriorly by the choanae, when these structures are present.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ZFA:0000130|Wikipedia:Nasal_cavity|VHOG:0000271|UMLS:C0027423|TAO:0000130|SCTID:263481003|NCIT:C12424|MESH:D009296|MA:0000284|GAID:350|FMA:54378|EMAPA:17604|EHDAA:6801|EHDAA2:0001226|BTO:0002096|AAO:0000314,,,,,,,,,,,,,,,,,,,,,,,,,olfactory chamber cavity|nasal fossa|nasal conduit space|nasal canal|cavity of olfactory apparatus|cavity of nose,,,,UBERON:0001707,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,nasal cavity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An anatomical cavity that is part of the olfactory apparatus. This includes the space bounded anteriorly by the nares and posteriorly by the choanae, when these structures are present.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C126054,Non-Pathological,Non-Pathological|NON-PATHOLOGICAL,The absence of disease or pathology.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Non-Pathological|NON-PATHOLOGICAL,,,,NCIT:C126054,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Non-Pathological,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The absence of disease or pathology.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_33833,heteroarene,,"A heterocyclic compound formally derived from an arene by replacement of one or more methine (‒C=) and/or vinylene (‒CH=CH‒) groups by trivalent or divalent heteroatoms, respectively, in such a way as to maintain the continuous π-electron system characteristic of aromatic systems and a number of out-of-plane π-electrons corresponding to the Hückel rule (4<em>n</em>+2).",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:33833,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,heteroarene,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A heterocyclic compound formally derived from an arene by replacement of one or more methine (‒C=) and/or vinylene (‒CH=CH‒) groups by trivalent or divalent heteroatoms, respectively, in such a way as to maintain the continuous π-electron system characteristic of aromatic systems and a number of out-of-plane π-electrons corresponding to the Hückel rule (4<em>n</em>+2).",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000369,veal shoulder blade (raw),,A raw veal shoulder arm cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000369,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,veal shoulder blade (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw veal shoulder arm cut.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_28908,bambermycin,,A glycophospholipid antibiotic compound with the lipid portion conjugated to a pentasaccharide fraction via a phosphate linkage.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:5075|CHEBI:25360,,,,,,CHEBI:28908,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,bambermycin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A glycophospholipid antibiotic compound with the lipid portion conjugated to a pentasaccharide fraction via a phosphate linkage.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0001034,environmental control device,,"An environmental control device is a device which has the function to control some aspect of the environment such as temperature, or humidity.",FALSE,,,,,,,,,,,,,,,,,,,,,OBI,,,,,environmental control device,,A growth chamber is an environmental control device.,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0001034,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,environmental control device,,,,,,,,,,,,,,,,,,,,,,,,,,,,Helen Parkinson,,,,"An environmental control device is a device which has the function to control some aspect of the environment such as temperature, or humidity.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001635,obsolete: specimen from subject datum,,An organism isolate datum is any datum pertaining to an isolate organism,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001635,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: specimen from subject datum,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,An organism isolate datum is any datum pertaining to an isolate organism,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000301,pork sirloin chop (raw),,A raw pork sirloin chop.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000301,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pork sirloin chop (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw pork sirloin chop.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000991,bathtub fixture,bathtub,A plumbing fixture which may serve as a container for water in which humans or other animals may bathe.,FALSE,,,,,,,,,,,,,,"Of course, there are other uses for bathtubs.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,bathtub,,,,ENVO:01000991,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,bathtub fixture,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A plumbing fixture which may serve as a container for water in which humans or other animals may bathe.,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0011382,sickle cell disease,sickling disorder due to Hemoglobin S|sickling disorder due to Haemoglobin S|sickle-cell/Hb-C disease without crisis|sickle cell disease|sickle cell anemia|Sickle Cell Disease|Hb-S/Hb-C disease|Haemoglobin S disease without crisis,"Sickle cell anemias are chronic hemolytic diseases that may induce three types of acute accidents: severe anemia, severe bacterial infections, and ischemic vasoocclusive accidents (VOA) caused by sickle-shaped red blood cells obstructing small blood vessels and capillaries. Many diverse complications can occur.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0002895|Orphanet:232|OMIM:603903|NORD:1714|NCIT:C34383|NANDO:2200624|MedDRA:10040641|MESH:D000755|MEDGEN:287|ICD9:282.63|ICD9:282.60|ICD9:282.6|ICD10CM:D57.2|GARD:0008614|DOID:10923|DOID:0081445,,,,,,,,,,,,,,,,,,,,,,,,,sickling disorder due to Hemoglobin S|sickling disorder due to Haemoglobin S|sickle-cell/Hb-C disease without crisis|sickle cell disease|sickle cell anemia|Sickle Cell Disease|Hb-S/Hb-C disease|Haemoglobin S disease without crisis,,,,MONDO:0011382,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#rare|http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar|http://purl.oboInOwllibrary.org/oboInOwl/mondo#orphanet_rare|http://purl.oboInOwllibrary.org/oboInOwl/mondo#ordo_disorder|http://purl.oboInOwllibrary.org/oboInOwl/mondo#nord_rare|http://purl.oboInOwllibrary.org/oboInOwl/mondo#gard_rare|http://purl.oboInOwllibrary.org/oboInOwl/mondo#doid_rare,,,,,,,,sickle cell disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Sickle cell anemias are chronic hemolytic diseases that may induce three types of acute accidents: severe anemia, severe bacterial infections, and ischemic vasoocclusive accidents (VOA) caused by sickle-shaped red blood cells obstructing small blood vessels and capillaries. Many diverse complications can occur.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_47622,acetate ester,,Any carboxylic ester where the carboxylic acid component is acetic acid.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:2406|CHEBI:22189|CHEBI:13799|CHEBI:13244,,,,,,CHEBI:47622,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,acetate ester,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any carboxylic ester where the carboxylic acid component is acetic acid.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00002844,"populated place, Canada",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00002844,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Canada",http://purl.obolibrary.org/obo/GAZ_00002560,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00002840,State (India),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00002840,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,State (India),http://purl.obolibrary.org/obo/GAZ_00002839,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00002848,Autonomous Region (China),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00002848,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Autonomous Region (China),http://purl.obolibrary.org/obo/GAZ_00002845,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002168,drug MIC unit specification,,The unit provided for an antibiotic drug test dosage.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002168,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ARO_3004372,,,,,,drug MIC unit specification,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,The unit provided for an antibiotic drug test dosage.,,,,,,,,
http://purl.obolibrary.org/obo/CLO_0000031,cell line,,"A cultured cell population that represents a genetically stable and homogenous population of cultured cells that shares a common propagation history (i.e. has been successively passaged together in culture).  
|A cultured cell population that represents a genetically stable and homogenous population of cultured cells that shares a common propagation history (i.e. has been successively passaged together in culture). ",FALSE,,,,,,,,,,,,,,"The term 'line' is used when a culture has undergone an intentional experimental process to establish a more uniform and stable population of cells (see 'establishing cell line'). This will require one or more passages, but may involve additional selection processes. Through such passaging and/or selection processes, the resulting 'line' attains some level of genetic stability and compositional homogeneity which is typically absent in primary cultures. Because of their relative homogeneity, ‘lines’ are capable of being characterized and stably propagated over a period of time.  A new *type* of cell line can be established not only through the passaging/selection of a primary culture, but also through experimental modifications of existing lines (e.g. immortalization, stable genetic modifications, drug selection for a resistant subset, etc.).  
	
The definition provided here establishes the 'scale' of cell populations that qualify as cell lines - specifically those with a shared propagation history in culture. In this way,  the 'cell line' class demarcates populations that represent what researchers actually use in the practice of science - e.g. as inputs to culturing, experimentation, and sharing. The definition is such that cell lines will exhibit important attributes. For example, they will have a relatively homogenous cell type composition as they have experienced similar selective pressures due to their continuous co-propagation. In addition, these populations can also be characterized by a passage number, again owing to their common passaging history.  As defined here,  'cell line' can refer to a population of cells in active culture, applied experimentally, or stored in a quiescent state for future use. 
",,,,,,,,,,,,cell line,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CLO:0000031,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/clo.owl,,,,,,,,,cell line,,,,,,,,,,,,,,,,,,,,,,,,,,,,"MB, SS, JZ, MAH, BP, CS, YH",,,,"A cultured cell population that represents a genetically stable and homogenous population of cultured cells that shares a common propagation history (i.e. has been successively passaged together in culture).  
|A cultured cell population that represents a genetically stable and homogenous population of cultured cells that shares a common propagation history (i.e. has been successively passaged together in culture). ",,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0002037,pleural disorder,non-neoplastic pleural disease,"A non-neoplastic or neoplastic disorder that affects the pleura. Representative examples include pleural infection, pleural mesothelioma, and pleural solitary fibrous tumor.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0032226|SCTID:88075009|NCIT:C26859|MESH:D010995|MEDGEN:10804|ICD9:518.89|DOID:1532,,,,,,,,,,,,,,,,,,,,,,,,,pleural disorders|pleural disorder|pleura disease or disorder|pleura disease|disorder of pleura|disease or disorder of pleura|disease of pleura,non-neoplastic pleural disease,,,MONDO:0002037,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,pleural disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A non-neoplastic or neoplastic disorder that affects the pleura. Representative examples include pleural infection, pleural mesothelioma, and pleural solitary fibrous tumor.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001042,food avoidance,,This will take on a sub-herarchy of food types.,FALSE,,,,,,,,,,,,,,This will take on a sub-herarchy of food types.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001042,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,food avoidance,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0002630,Illumina NovaSeq 6000,,"A DNA sequencer which is manufactured by the Illumina corporation, with two flow cells and an output of up to 6000 Gb (32-40 B reads per run). The sequencer utilizes synthesis technology and patterned flow cells to optimize throughput and even spacing of sequencing clusters.",FALSE,,,,,,,NovaSeq 6000,,,,,,,,,,,,,,http://www.illumina.com/systems/sequencing-platforms/novaseq.html,,,,,Illumina NovaSeq 6000,,Genomic DNA of Xenophilus sp. E41 was extracted and sequenced using an Illumina NovaSeq 6000 system.,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0002630,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Illumina NovaSeq 6000,,,,,,,,,,,,,,,,,,,,,,,,,,,,Dan Berrios,,,,"A DNA sequencer which is manufactured by the Illumina corporation, with two flow cells and an output of up to 6000 Gb (32-40 B reads per run). The sequencer utilizes synthesis technology and patterned flow cells to optimize throughput and even spacing of sequencing clusters.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001873,datetime range intermediate,,"A datetime range intermediate datum is a datetime item grouped under a process, and occuring  after some process start and before some process end.",FALSE,,,,,http://purl.obolibrary.org/obo/GENEPIO_0001878,,,,http://purl.obolibrary.org/obo/GENEPIO_0001877,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001873,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,datetime range intermediate,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"A datetime range intermediate datum is a datetime item grouped under a process, and occuring  after some process start and before some process end.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C173641,Rectal Swab Specimen,Rectal Swab Specimen|Rectal Swab,A biospecimen collected from the rectum by swabbing.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Rectal Swab Specimen|Rectal Swab,,,,NCIT:C173641,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Rectal Swab Specimen,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A biospecimen collected from the rectum by swabbing.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03430104,whole and pieces,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=E0104,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03430104,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,whole and pieces,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470147,food sterilization at ultra high temperature (UHT),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0147,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470147,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food sterilization at ultra high temperature (UHT),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100807,salinity measurement method,salinity measurement method,An environmental data field which describes the method used to measure salinity.,FALSE,,,,,,,PCDS:salinity_measurement_method,,,,,,,PCDS: Provide the name of the procedure or technology used to measure salinity.,,,,,,,,,,,,,,PCDS: conductivity meter,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,salinity measurement method,salinity measurement method slot,,,,GENEPIO:0100807,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,salinity measurement method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the method used to measure salinity.,,PCDS: The method used to measure salinity.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002095,read paired-end merging software,,The name and version of the software used to merge paired-end reads before assembly.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002095,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,read paired-end merging software,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The name and version of the software used to merge paired-end reads before assembly.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_26580,rifamycins,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:26580,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,rifamycins,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_03000010,material transport process,,A process during which material is displaced from its original location and transported either to a new location or back to the original location.,FALSE,,,,,,,,,,,,,,Experimental class for structural purposes not recommended for annotation.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:03000010,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,envoPolar,,,,,,,,material transport process,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://orcid.org/0000-0002-3410-4655|https://orcid.org/0000-0002-4366-3088,,,,A process during which material is displaced from its original location and transported either to a new location or back to the original location.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000097,beef 7-bone chuck roast,,A beef roast cut that is identified by its 7-shaped bone. The 7-bone is made by cutting roasts across the scapula or blade bone.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000097,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef 7-bone chuck roast,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A beef roast cut that is identified by its 7-shaped bone. The 7-bone is made by cutting roasts across the scapula or blade bone.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_73537,"1,8-naphthyridine derivative",,"Any naphthyridine derivative that is a derivative of 1,8-naphthyridine.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:73537,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,"1,8-naphthyridine derivative",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Any naphthyridine derivative that is a derivative of 1,8-naphthyridine.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0015833,foregut epithelium,,An epithelium that is part of a foregut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MA:0003204|EMAPA:32922,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0015833,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,foregut epithelium,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An epithelium that is part of a foregut.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000039,nitrite concentration,,An environmental datum which describes the concentration of nitrite of a sample.,FALSE,,,,,,,,,,,,,,,,,,,,,GROUP: MIxS enviro package,,,,,,,micromole per liter,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000039,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,,,,,,,nitrite concentration,,,,,Environmental Isolate,,,,,,,,,,,,,,,,,,,,,,Nitrite,,,GROUP: MIxS,,An environmental datum which describes the concentration of nitrite of a sample.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510235,ethnic food claim,,"Ethnic food is food from countries other than the home market contributing to a different food culture than the traditional cuisine of the host country. [Ethnic Groups and Foods in Europe, EuroFIR Synthesis report No 3, 2005]

""Ethnic food""has been used colloquially for a wide variety of foodstuffs, virtually any that can be identified in the public mind with a foreign source or an ethnic minority group. In the narrower ethnographic meaning, it pertains only to food prepared or consumed by members of an ethnic group as a manifestation of its ethnicity. In the end ethnic food is food that members of an ethnic group consider their own and that others attribute to them. [http://www.answers.com/topic/ethnic-cuisines]",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0235,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510235,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,ethnic food claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Ethnic food is food from countries other than the home market contributing to a different food culture than the traditional cuisine of the host country. [Ethnic Groups and Foods in Europe, EuroFIR Synthesis report No 3, 2005]

""Ethnic food""has been used colloquially for a wide variety of foodstuffs, virtually any that can be identified in the public mind with a foreign source or an ethnic minority group. In the narrower ethnographic meaning, it pertains only to food prepared or consumed by members of an ethnic group as a manifestation of its ethnicity. In the end ethnic food is food that members of an ethnic group consider their own and that others attribute to them. [http://www.answers.com/topic/ethnic-cuisines]",,,,,,,,
http://purl.obolibrary.org/obo/OBI_0001879,reagent,,"A biological or chemical entity that bears a reagent role in virtue of it being intended for application in a scientific technique  to participate in (or have molecular parts that participate in) a chemical reaction that facilitates the generation of data about some distinct entity, or the generation of some distinct material specified output.",FALSE,,,,,,,,,,,,,,"(copied from ReO)
Reagents are distinguished from devices/instruments that also serve as facilitators in scientific techniques by the fact that reagents are chemical or biological in nature and necessarily participate in or have parts that participate in some chemical interaction or reaction during their intended participation in some technique.  By contrast, devices do not participate in a chemical reaction/interaction during the technique.

Reagents are distinguished from study subjects/evaluants in that study subjects and evaluants are that about which conclusions are drawn and knowledge is sought in an investigation - while reagents, by definition, are not.  It should be noted, however, that reagent and study subject/evaluant roles can be borne by instances of the same type of material entity - but a given instance can only realize one of these roles in the execution of a given  assay. For example, taq polymerase can bear a reagent role or an evaluant role.  In a DNA sequencing assay aimed at generating sequence data about some plasmid, the reagent role of the taq polymerase is realized. In an assay to evaluate the quality of the taq polymerase itself, the evaluant/study subject role of the taq is realized, but not the reagent role since the taq is the subject about which data is generated.

In regard to the statement that reagents are 'distinct' from the specified outputs of a technique:  note that a reagent may be incorporated into a material output of a technique, as long as the IDENTITY of this output is distinct from that of the bearer of the reagent role.  For example, dNTPs input into a PCR are reagents that become part of the material output of this technique, but this output has a new identity (ie that of a 'nucleic acid molecule') that is distinct from the identity of the dNTPs that comprise it.  Similarly, a biotin molecule input into a cell labeling technique are reagents that become part of the specified output, but the identity of the output is that of some modified cell specimen which shares identity with the input unmodified cell specimen, and not with the biotin label. Thus, we see that an important criteria of 'reagent-ness' is that it is a facilitator, and not the primary focus of an investigation or material processing technique (ie not the specified subject/evaluant about which knowledge is sought, or the specified output material of the technique).",,,,,,,PERSON:Matthew Brush,,,,"2013-6-5 MHB: Clarifications regarding the distinction between reagetns and devices were made at the May 2013 Philly Workshop. Reagents are distinguished from devices that also participate in scientific techniques by the fact that reagents are chemical or biological in nature and necessarily participate in some chemical interaction or reaction during the realization of their experimental role. By contrast, devices do not participate in such chemical reactions/interactions.  Note that there are cases where devices use reagent components during their operation, where the reagent-device distinction is less clear.  For examples, see editor note on OBI:device.",reagent,,,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0001879,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/COB_0000110,,reagent,,,,,,,,,,,,,,,,,,,,,,,,,,,,PERSON:Matthew Brush,,,,"A biological or chemical entity that bears a reagent role in virtue of it being intended for application in a scientific technique  to participate in (or have molecular parts that participate in) a chemical reaction that facilitates the generation of data about some distinct entity, or the generation of some distinct material specified output.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_16247,phospholipid,,A lipid containing phosphoric acid as a mono- or di-ester. The term encompasses phosphatidic acids and phosphoglycerides.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:8150|CHEBI:26063|CHEBI:14816,,,,,,CHEBI:16247,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,phospholipid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A lipid containing phosphoric acid as a mono- or di-ester. The term encompasses phosphatidic acids and phosphoglycerides.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C43214,Plastic Vial,"VIAL, PLASTIC|Plastic Vial",A plastic container designed for use with parenteral drug products.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"VIAL, PLASTIC|Plastic Vial",,,,NCIT:C43214,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Plastic Vial,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A plastic container designed for use with parenteral drug products.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001749,proteome data derived from specimen,,Proteome material is protein or peptide sequences.,FALSE,,,,,,,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/books/NBK54364/,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001749,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,proteome data derived from specimen,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,Proteome material is protein or peptide sequences.,,,,proteome,,,,
http://purl.obolibrary.org/obo/GAZ_00002855,"populated place, Mexico",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00002855,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Mexico",http://purl.obolibrary.org/obo/GAZ_00002852,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00002857,State (United States of Mexico),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00002857,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,State (United States of Mexico),http://purl.obolibrary.org/obo/GAZ_00002852,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490275,"glass container, uncoloured, normal weight",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0275,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490275,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"glass container, uncoloured, normal weight",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470153,preservation by adding spices or extracts,,"Preservation by adding spices or extracts (e.g. garlic, onion, horseradish, paprika) to suppress or inhibit undesirable micro-organisms, enzyme activity, or oxidative changes.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0153,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470153,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,preservation by adding spices or extracts,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Preservation by adding spices or extracts (e.g. garlic, onion, horseradish, paprika) to suppress or inhibit undesirable micro-organisms, enzyme activity, or oxidative changes.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_33695,information biomacromolecule,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:33695,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,information biomacromolecule,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100242,mass exposure datum,,A human eucharistic liturgical gathering in which humans perform public worship.,FALSE,,,,,,,Mass,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Mass_(liturgy),,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100242,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,mass exposure datum,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A human eucharistic liturgical gathering in which humans perform public worship.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100062,cyanotic face,bluish face,Persistent blue discoloration of the lips.,FALSE,,,,,,,Cyanotic face (bluish face),,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,bluish face,,,,GENEPIO:0100062,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,cyanotic face,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Persistent blue discoloration of the lips.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00011335,"populated place, Montenegro",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00011335,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Montenegro",http://purl.obolibrary.org/obo/GAZ_00006898,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000213,colony forming unit per milliliter,colony forming unit per millilitre|cfu/ml,A colony forming unit which a measure of viable bacterial numbers in one milliliter.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,colony forming unit per millilitre|cfu/ml,,,,UO:0000213,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,colony forming unit per milliliter,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A colony forming unit which a measure of viable bacterial numbers in one milliliter.,,,,cfu/mL,,,,
http://purl.obolibrary.org/obo/UO_0000212,colony forming unit per volume,,A concentration unit which a measure of viable bacterial numbers in a given volume.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:0000212,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,colony forming unit per volume,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A concentration unit which a measure of viable bacterial numbers in a given volume.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000217,electric potential difference unit,,A unit which is a standard measure of the work done per unit charge as a charge is moved between two points in an electric field.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:0000217,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,electric potential difference unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A unit which is a standard measure of the work done per unit charge as a charge is moved between two points in an electric field.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000210,colony forming unit,cfu,A dimensionless count unit which a measure of viable bacterial numbers.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,cfu,,,,UO:0000210,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,colony forming unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A dimensionless count unit which a measure of viable bacterial numbers.,,,,,,,,
http://www.ebi.ac.uk/efo/EFO_0020044,eicosanoids measurement,,"The determination of the amount of eicosanoids present in a sample, typically blood ",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PMID:34503513,,,,,,,,,,,,,,,,,,,,,,,,,,,,,efo:EFO_0020044,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,eicosanoids measurement,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The determination of the amount of eicosanoids present in a sample, typically blood ",,,,,,,,
http://purl.obolibrary.org/obo/OBI_0002627,ribosomal RNA-depleted RNA extract,,An extract of RNA which is produced through rRNA (ribosomal RNA) depletion (the removal of highly abundant rRNA species).,FALSE,,,,,,,,,,,,,,,,,,,,,https://bmcgenomics.biomedcentral.com/articles/10.1186/s12864-018-4585-1,,,,,ribosomal RNA-depleted RNA extract,,"Looking at the reads for each ribosomal RNA-depleted RNA extract, the vast majority align to protein coding genes based on the ENSEMBL annotation.",,,http://purl.obolibrary.org/obo/IAO_0000125,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0002627,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ribosomal RNA-depleted RNA extract,,,,,,,,,,,,,,,,,,,,,,,,,,,,Dan Berrios,,,,An extract of RNA which is produced through rRNA (ribosomal RNA) depletion (the removal of highly abundant rRNA species).,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100028,suprapubic aspiration,,An aspiration process which involves putting a needle through the skin just above the pubic bone into the bladder to take a urine sample.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100028,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,suprapubic aspiration,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An aspiration process which involves putting a needle through the skin just above the pubic bone into the bladder to take a urine sample.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_7,disease of anatomical entity,,A disease that manifests in a defined anatomical structure.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:7,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,disease of anatomical entity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A disease that manifests in a defined anatomical structure.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_4,disease,,A disease is a disposition (i) to undergo pathological processes that (ii) exists in an organism because of one or more disorders in that organism.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/OGMS_0000031,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:4,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A disease is a disposition (i) to undergo pathological processes that (ii) exists in an organism because of one or more disorders in that organism.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100448,sample storage method,food_packaging|food packaging,A data field which describes the way that a specimen is or was stored.,FALSE,,,,,,,PCDS:sample_storage_method,,,,,,,PCDS: Provide a description of how the sample was stored.,,,,,,,,,,,,,,PCDS: packed on ice during transport,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,food_packaging|food packaging,food packaging slot,,,,GENEPIO:0100448,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,sample storage method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the way that a specimen is or was stored.,,PCDS: The process used to store the sample.,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510170,lactose reduced food,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0170,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510170,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lactose reduced food,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_22907,bleomycin,,"A glycopeptide produced by the bacterium <em>Streptomyces verticillus</em>. The term, 'bleomycin' refers to a family of structurally related compounds. When used as an anti-cancer agent, the chemotherapeutical forms are primarily bleomycin A<small><sub>2</sub></small> and B<small><sub>2</sub></small>.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:584977,,,,,,CHEBI:22907,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,bleomycin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A glycopeptide produced by the bacterium <em>Streptomyces verticillus</em>. The term, 'bleomycin' refers to a family of structurally related compounds. When used as an anti-cancer agent, the chemotherapeutical forms are primarily bleomycin A<small><sub>2</sub></small> and B<small><sub>2</sub></small>.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001208,obsolete: mother,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001208,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: mother,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/NCIT_C25189,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02022267,"animal breast (bone-in, raw)",,A raw bone-in animal breast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02022267,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"animal breast (bone-in, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw bone-in animal breast.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0002597,Abnormality of the vasculature,Vascular abnormalities|Abnormality of the vasculature|Abnormality of blood vessels,An abnormality of the vasculature.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0241657,,,,,,,,,,,,,,,,,,,,,,,,,Vascular abnormalities|Abnormality of the vasculature|Abnormality of blood vessels,,,,HP:0002597,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormality of the vasculature,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An abnormality of the vasculature.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001672,obsolete: gestation duration (weeks),,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001672,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: gestation duration (weeks),,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,http://purl.obolibrary.org/obo/VT_0002292,,,,,,,,,,,
http://purl.obolibrary.org/obo/HP_0200039,Pustule,Skin pustules|Skin pustule|Pustules|Pustular lesion|Pustula|Pimple,A small elevation of the skin containing cloudy or purulent material usually consisting of necrotic inflammatory cells.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0542346|UMLS:C0241157|SNOMEDCT_US:47002008|SNOMEDCT_US:285305004|SNOMEDCT_US:271760008|SNOMEDCT_US:103605005|MEDDRA:10037578,,,,,,,,,,,,,,,,,,,,,,,,,Skin pustules|Skin pustule|Pustules|Pustular lesion|Pustula|Pimple,,,,HP:0200039,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,http://purl.oboInOwllibrary.org/oboInOwl/hp#hposlim_core,,,,,,,,Pustule,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A small elevation of the skin containing cloudy or purulent material usually consisting of necrotic inflammatory cells.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_36963,organooxygen compound,,An organochalcogen compound containing at least one carbon-oxygen bond.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:36963,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,organooxygen compound,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An organochalcogen compound containing at least one carbon-oxygen bond.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001594,analysis objective,,"An ""analysis project objective"" indicates there was an other analysis not otherwise indicated, includes submission of BAM files.",FALSE,,,,,,,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/books/NBK54364/,,,,"This defn. could be a negation of the ""not otherwise indicated"".",,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001594,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,analysis objective,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"An ""analysis project objective"" indicates there was an other analysis not otherwise indicated, includes submission of BAM files.",,,,analysis,,,,
http://purl.obolibrary.org/obo/DOID_863,nervous system disease,,A disease of anatomical entity that is located_in the central nervous system or located_in the peripheral nervous system.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:863,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,nervous system disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A disease of anatomical entity that is located_in the central nervous system or located_in the peripheral nervous system.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C42568,Unit by Category,Unit by Category,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Unit by Category,,,,NCIT:C42568,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Unit by Category,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_3481,septicemic plague,,"A plague that results_in infection located_in vasculature where bacterial endotoxins cause coagulation, which leads to formation of tiny clots throughout the body. The infection has_symptom fever, has_symptom chills, has_symptom prostration, has_symptom abdominal pain, has_symptom shock and has_symptom bleeding into skin and other organs.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:3481,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,septicemic plague,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A plague that results_in infection located_in vasculature where bacterial endotoxins cause coagulation, which leads to formation of tiny clots throughout the body. The infection has_symptom fever, has_symptom chills, has_symptom prostration, has_symptom abdominal pain, has_symptom shock and has_symptom bleeding into skin and other organs.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_33595,cyclic compound,,Any molecule that consists of a series of atoms joined together to form a ring.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:33595,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,cyclic compound,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any molecule that consists of a series of atoms joined together to form a ring.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C80519,Biological Model,Systems Model|Biological Models|Biological Model System|Biological Model,"Systems designed to elucidate facts about complex biological phenomena, usually in a less complex or theoretical test environment.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Systems Model|Biological Models|Biological Model System|Biological Model,,,,NCIT:C80519,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Biological Model,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Systems designed to elucidate facts about complex biological phenomena, usually in a less complex or theoretical test environment.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0101020,rRNA depletion method,,A library selection process in which background rRNA is removed for the purposes of enriching the genomic target.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0101020,,,,,,,,,,,,,,2026-04-13T19:52:38.515Z,,,,,,,,,,,,,,,,,,,rRNA depletion method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A library selection process in which background rRNA is removed for the purposes of enriching the genomic target.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100271,mother role,,A role inhering in a person that is realized when the bearer is the female parent of a child.,FALSE,,,,,,,Mother of case,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Mother,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100271,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,mother role,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A role inhering in a person that is realized when the bearer is the female parent of a child.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00005867,"Pitcairn, Henderson, Ducie and Oeno Islands",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00005867,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,"Pitcairn, Henderson, Ducie and Oeno Islands",http://purl.obolibrary.org/obo/GAZ_00051089,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002074,RefSeq accession identifier,,"A RefSeq accession identifier is an accession identifier for selected NCBI-curated genomic, transcript and protein sequences.  These identifiers are distinct from DDBJ/EMBL/GenBank identifiers.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002074,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,RefSeq accession identifier,,,,,,,,,,,,,,,,,,,,,,http://www.ncbi.nlm.nih.gov/refseq/about/,,,,,,Damion Dooley,,,,"A RefSeq accession identifier is an accession identifier for selected NCBI-curated genomic, transcript and protein sequences.  These identifiers are distinct from DDBJ/EMBL/GenBank identifiers.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100625,tophit taxon determination,,PCDS: Enter the EZBioCloud taxon best-hit.,FALSE,,,,,,,PCDS:tophit_taxon_determination,,,,,,,PCDS: Enter the EZBioCloud taxon best-hit.,,,,,,,,,,,,,,PCDS: Staphylococcus argenteus,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100625,,,,,,,,,,,,,,2026-04-13T17:16:47.336Z,,,,,,,,,,,,,,,,,,,tophit taxon determination,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PCDS: The taxon derived from the top hit in search results produced from a sequence similarity comparison.,,,,,,
http://purl.obolibrary.org/obo/NCIT_C26871,Respiratory System Disorder,Unspecified Respiratory Problem|Respiratory System Disorder|Respiratory Disorder|Disorder of Respiratory System,"A non-neoplastic or neoplastic disorder that affects the respiratory system. Representative examples include pneumonia, chronic obstructive pulmonary disease, pulmonary failure, lung adenoma, lung carcinoma, and tracheal carcinoma.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Unspecified Respiratory Problem|Respiratory System Disorder|Respiratory Disorder|Disorder of Respiratory System,,,,NCIT:C26871,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Respiratory System Disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A non-neoplastic or neoplastic disorder that affects the respiratory system. Representative examples include pneumonia, chronic obstructive pulmonary disease, pulmonary failure, lung adenoma, lung carcinoma, and tracheal carcinoma.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000204,beef rib (raw),,A raw beef rib cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000204,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef rib (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef rib cut.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000057,beef chuck eye roast (raw),,A raw beef chuck eye roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000057,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef chuck eye roast (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef chuck eye roast.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000353,veal loin (raw),,A raw veal loin cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000353,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,veal loin (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw veal loin cut.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00005684,deer family material,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00005684,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,deer family material,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_7934,paromomycin,,"An amino cyclitol glycoside that is the 1-<em>O</em>-(2-amino-2-deoxy-α-<small>D</small>-glucopyranoside) and the 3-<em>O</em>-(2,6-diamino-2,6-dideoxy-β-<small>L</small>-idopyranosyl)-β-<small>D</small>-ribofuranoside of 4,6-diamino-2,3-dihydroxycyclohexane (the 1<i>R</i>,2<i>R</i>,3<i>S</i>,4<i>R</i>,6<i>S</i> diastereoisomer). It is obtained from various <em>Streptomyces</em> species. A broad-spectrum antibiotic, it is used (generally as the sulfate salt) for the treatment of acute and chronic intestinal protozoal infections, but is not effective for extraintestinal protozoal infections. It is also used as a therapeutic against visceral leishmaniasis.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:44703,,,,,,CHEBI:7934,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,paromomycin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An amino cyclitol glycoside that is the 1-<em>O</em>-(2-amino-2-deoxy-α-<small>D</small>-glucopyranoside) and the 3-<em>O</em>-(2,6-diamino-2,6-dideoxy-β-<small>L</small>-idopyranosyl)-β-<small>D</small>-ribofuranoside of 4,6-diamino-2,3-dihydroxycyclohexane (the 1<i>R</i>,2<i>R</i>,3<i>S</i>,4<i>R</i>,6<i>S</i> diastereoisomer). It is obtained from various <em>Streptomyces</em> species. A broad-spectrum antibiotic, it is used (generally as the sulfate salt) for the treatment of acute and chronic intestinal protozoal infections, but is not effective for extraintestinal protozoal infections. It is also used as a therapeutic against visceral leishmaniasis.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100808,total nitrogen tn measurement value,total nitrogen (TN) measurement value,An environmental data field which describes the numerical value of a measurement of total nitrogen (TN).,FALSE,,,,,,,PCDS:total_nitrogen_tn_measurement_value,,,,,,,PCDS: Provide the numerical value of the measured TN.,,,,,,,,,,,,,,PCDS: 120,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,total nitrogen (TN) measurement value,total nitrogen (TN) measurement value slot,,,,GENEPIO:0100808,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,total nitrogen tn measurement value,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the numerical value of a measurement of total nitrogen (TN).,,PCDS: The numerical value of a measurement of total nitrogen (TN).,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020172,piece of chicken (with skin),,A piece of chicken that contains skin.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020172,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of chicken (with skin),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A piece of chicken that contains skin.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01001782,landmass,,"A large continuous area of land, either surrounded by sea or contiguous with another landmass.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01001782,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,landmass,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A large continuous area of land, either surrounded by sea or contiguous with another landmass.",,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000191,solid astronomical body part,,A part of an astronomical body which is primarily composed of solid material.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,TGN:21401|TGN:21400|SWEETRealm:Landform|FTT:96|FTT:754|EcoLexicon:landforms|EcoLexicon:landform,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00000191,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,solid astronomical body part,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A part of an astronomical body which is primarily composed of solid material.,,,,,,,,
http://purl.obolibrary.org/obo/IDO_0000512,diseased population,,An organism population in whose members an infectious disease is being realized.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,IDO:0000512,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ido.owl,,,,,,,,,diseased population,,,,,,,,,,,,,,,,,,,,,,,,,,,,Lindsay Cowell|Alexander Diehl|Albert Goldfain,,,,An organism population in whose members an infectious disease is being realized.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_9063,Ritter's disease,,"A commensal bacterial infectious disease that is characterized by widespread erythema, peeling, and necrosis of the skin, that is caused by a toxin produced by a bacterium of the genus Staphylococcus (S. aureus). The infection has_symptom redness of skin, has_symptom fluid-filled blister formation, has_symptom fever and has_symptom irritability.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:9063,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,Ritter's disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A commensal bacterial infectious disease that is characterized by widespread erythema, peeling, and necrosis of the skin, that is caused by a toxin produced by a bacterium of the genus Staphylococcus (S. aureus). The infection has_symptom redness of skin, has_symptom fluid-filled blister formation, has_symptom fever and has_symptom irritability.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0007379,shelled egg,,The hard-shelled reproductive body produced by a bird (especially by the common domestic chicken) or a reptile; also: its contents used as food.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Egg_(biology)|BTO:0000369|BSA:0000081,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0007379,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,shelled egg,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The hard-shelled reproductive body produced by a bird (especially by the common domestic chicken) or a reptile; also: its contents used as food.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0007378,egg yolk,,The yellow spheroidal mass of stored food that forms the inner portion of the egg of a bird or reptile and is surrounded by the white.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ncithesaurus:Egg_Yolk|Wikipedia:Yolk|VHOG:0001742|MESH:D004530|BTO:0000371|AAO:0010579,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0007378,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,egg yolk,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The yellow spheroidal mass of stored food that forms the inner portion of the egg of a bird or reptile and is surrounded by the white.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0007376,outer epithelium,outer epithelial layer|outer epidermal layer|epidermis (sensu Metazoa)|epidermis,"The epidermis is the entire outer epithelial layer of an animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species[GO].",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Epidermis_(zoology)|WBbt:0005733|TADS:0000109|HAO:0000298|FBbt:00004993|BTO:0000313|BSA:0000073,,,,,,,,,,,,,,,,,,,,,,,,,outer epithelial layer|outer epidermal layer|epidermis (sensu Metazoa)|epidermis,,,,UBERON:0007376,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,outer epithelium,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The epidermis is the entire outer epithelial layer of an animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species[GO].",,,,,,,,
http://purl.obolibrary.org/obo/DOID_3482,plague,,"A primary bacterial infectious disease that results_in infection, located_in lymph node, located_in vasculature or located_in lungs, has_material_basis_in Yersinia pestis, which is transmitted_by oriental rat flea (Xenopsylla cheopis) infected by feeding on rodents and other mammals, transmitted_by air, transmitted_by direct contact or transmitted_by ingestion of contaminated undercooked food.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:3482,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,plague,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A primary bacterial infectious disease that results_in infection, located_in lymph node, located_in vasculature or located_in lungs, has_material_basis_in Yersinia pestis, which is transmitted_by oriental rat flea (Xenopsylla cheopis) infected by feeding on rodents and other mammals, transmitted_by air, transmitted_by direct contact or transmitted_by ingestion of contaminated undercooked food.",,,,,,,,
http://purl.obolibrary.org/obo/BTO_0000797,colonic cancer cell line,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,BTO:0000797,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/bto.owl,,,,,,,,,colonic cancer cell line,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C25677,Shape,Shape|SHAPE,The spatial arrangement of something as distinct from its substance.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Shape|SHAPE,,,,NCIT:C25677,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Shape,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The spatial arrangement of something as distinct from its substance.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102080,data steward contact email,,"PCDS: Enter the name of the individual responsible for managing and overseeing the data. As the applicable address can change when there is staff turnover, a general contact email or the email tied to the responsible individual's position, can be provided instead.",FALSE,,,,,,,PCDS:data_steward_contact_email,,,,,,,"PCDS: Enter the name of the individual responsible for managing and overseeing the data. As the applicable address can change when there is staff turnover, a general contact email or the email tied to the responsible individual's position, can be provided instead.",,,,,,,,,,,,,,PCDS: data_steward@lab.ca,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102080,,,,,,,,,,,,,,2026-04-13T17:16:47.336Z,,,,,,,,,,,,,,,,,,,data steward contact email,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PCDS: The email address of the data steward.,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000856,city,urban area,Incorporated populated place.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/City|TGN:83043|TGN:83040|TGN:83020|SWEETRealm:City|FTT:485|FTT:484|FTT:483|FTT:430|EcoLexicon:city,,,,,,,,,,,,,,,,,,,,,,,,urban area,http://purl.obolibrary.org/obo/NCIT_C80234,,,,ENVO:00000856,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl|http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,city,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Incorporated populated place.,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000519,Damara,,A Khoisan South population with a population size of 146000,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000519,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Damara|Damara,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Khoisan South population with a population size of 146000,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000511,Kunama,,A Nilotic Eastern population with a population size of 260000,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000511,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Kunama|Kunama,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Nilotic Eastern population with a population size of 260000,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000510,Pokot,,A Kalenjin population with a population size of 969000,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000510,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Pokot|Pokot,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Kalenjin population with a population size of 969000,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000514,Teso,,"A Nilotic Eastern population with a population size of 2,873 Millions",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000514,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Teso|Teso,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A Nilotic Eastern population with a population size of 2,873 Millions",,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000513,Nara,,A Nilotic Eastern population with a population size of 108000,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000513,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Nara|Nara,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Nilotic Eastern population with a population size of 108000,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000516,Aushi,,A Bemba population with a population size of 433000,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000516,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Aushi|Aushi,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Bemba population with a population size of 433000,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000517,Okavango,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000517,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Okavango|Okavango,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000515,Jeberti,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000515,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Jeberti|Jeberti,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000518,Lozi,,"A Sotho population with a population size of 3,575 Millions",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000518,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Lozi|Lozi,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A Sotho population with a population size of 3,575 Millions",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102181,surface water quality surveillance sampling,,"A sampling strategy in which surface waters are systematically sampled to assess overall water quality, detect contaminants, and identify emerging risks. Surveillance is broad and ongoing, aiming to establish baseline conditions and detect changes over time.",FALSE,,,,,,,Surface water quality surveillance,,,,,,,,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102181,,,,,,,,,,,,,https://orcid.org/0000-0001-8008-8249,2026-04-13T19:52:38.515Z,,,,,,,,,,,,,,,,,,,surface water quality surveillance sampling,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A sampling strategy in which surface waters are systematically sampled to assess overall water quality, detect contaminants, and identify emerging risks. Surveillance is broad and ongoing, aiming to establish baseline conditions and detect changes over time.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100729,total coliform count microbiological quantification tag,total coliform count data type,A colony count microbiological quantification data tag which indicates the presence of data that describes total colony count of coliforms.,FALSE,,,,,,,total coliform count,,,,,,,Example Guidance: Use this tag to indicate additional data is available that provides quantification information from microbial total coliform counts.,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,total coliform count data type,,,,GENEPIO:0100729,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-05-18T19:08:34.869Z,,,,,,,,,,,,,,,,,,,total coliform count microbiological quantification tag,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A colony count microbiological quantification data tag which indicates the presence of data that describes total colony count of coliforms.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03480024,packed in extra heavily sweetened liquid,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=K0024,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03480024,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,packed in extra heavily sweetened liquid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/OBA_2040153,age of onset of cancer,age cancer symptoms begin|age at onset of cancer,The age at which cancer manifestations first appear.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,age cancer symptoms begin|age at onset of cancer,,,,OBA:2040153,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age of onset of cancer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The age at which cancer manifestations first appear.,,,,,,,,
http://purl.obolibrary.org/obo/ARO_3004396,mechanism-specific test,,Test that directly detect the presence of a particular resistance mechanism.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ARO:3004396,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/aro.owl,,,,,,,,,mechanism-specific test,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Test that directly detect the presence of a particular resistance mechanism.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0001410,Decreased liver function,Liver dysfunction|Decreased liver function,Reduced ability of the liver to perform its functions.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C3279149|UMLS:C0232744|UMLS:C0086565|SNOMEDCT_US:77981007|SNOMEDCT_US:75183008,,,,,,,,,,,,,,,,,,,,,,,HP:0006570|HP:0005228|HP:0004393,,Liver dysfunction|Decreased liver function,,,,HP:0001410,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Decreased liver function,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Reduced ability of the liver to perform its functions.,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0100319,COVID-19–associated multisystem inflammatory syndrome in adults,MIS-A,"A inflammatory syndrome in adults infected by the SARS-CoV-2 with severe illness requiring hospitalization in a person aged ≥21 years; a positive test result for current or previous SARS-CoV-2 infection (nucleic acid, antigen, or antibody) during admission or in the previous 12 weeks; severe dysfunction of one or more extrapulmonary organ systems (e.g., hypotension or shock, cardiac dysfunction, arterial or venous thrombosis or thromboembolism, or acute liver injury); laboratory evidence of severe inflammation (e.g., elevated CRP, ferritin, D-dimer, or interleukin-6); and absence of severe respiratory illness (to exclude patients in which inflammation and organ dysfunction might be attributable simply to tissue hypoxia).",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GARD:0026142,,,,,,,,,,,,,,,,,,,,,,,,,MIS-A,,,,MONDO:0100319,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#rare|http://purl.oboInOwllibrary.org/oboInOwl/mondo#gard_rare,,,,,,,,COVID-19–associated multisystem inflammatory syndrome in adults,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A inflammatory syndrome in adults infected by the SARS-CoV-2 with severe illness requiring hospitalization in a person aged ≥21 years; a positive test result for current or previous SARS-CoV-2 infection (nucleic acid, antigen, or antibody) during admission or in the previous 12 weeks; severe dysfunction of one or more extrapulmonary organ systems (e.g., hypotension or shock, cardiac dysfunction, arterial or venous thrombosis or thromboembolism, or acute liver injury); laboratory evidence of severe inflammation (e.g., elevated CRP, ferritin, D-dimer, or interleukin-6); and absence of severe respiratory illness (to exclude patients in which inflammation and organ dysfunction might be attributable simply to tissue hypoxia).",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001446,purpose of sequencing details,purpose of sequencing details,A data field which describes the description of why the sample was sequenced providing specific details.,FALSE,,,,,,,PCDS:purpose_of_sequencing_details,,,,,,,PCDS: Provide an expanded description of why the sample was sequenced using free text. This information can provide details about why the sample source might contain antibiotic potentiators.,,,,,,,,,,,,,,PCDS: Hospital outbreak,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,purpose of sequencing details,purpose of sequencing details slot,,,,GENEPIO:0001446,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,purpose of sequencing details,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the description of why the sample was sequenced providing specific details.,,PCDS: The description of why the sample was sequenced providing specific details.,,,,,,
http://purl.obolibrary.org/obo/NCIT_C191434,Mechanical Support,Mechanical Support,Ventilatory or circulatory support given to patients to assist with pulmonary or cardiac function.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Mechanical Support,,,,NCIT:C191434,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Mechanical Support,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Ventilatory or circulatory support given to patients to assist with pulmonary or cardiac function.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_59780,cyclic hemiketal,,"A hemiacetal  having the structure R<small><sub>2</sub></small>C(OH)OR (R ≠ H), derived from a ketone by formal addition of an alcohol to the carbonyl group. The term 'cyclic hemiketals', once abandoned by IUPAC, has been reinstated as a subclass of hemiacetals.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:59780,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,cyclic hemiketal,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A hemiacetal  having the structure R<small><sub>2</sub></small>C(OH)OR (R ≠ H), derived from a ketone by formal addition of an alcohol to the carbonyl group. The term 'cyclic hemiketals', once abandoned by IUPAC, has been reinstated as a subclass of hemiacetals.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001754,random survey data capture,,Sequences generated from a random sampling of the collected sample; not intended to be comprehensive sampling of the material,FALSE,,,,,,,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/books/NBK54364/,,,,Is this with respect to an isolate or a specimen derived culture?,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001754,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,random survey data capture,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,Sequences generated from a random sampling of the collected sample; not intended to be comprehensive sampling of the material,,,,random survey,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001680,obsolete: draft IRIDA model,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001680,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: draft IRIDA model,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO_0001829,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002017,geospatial name,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002017,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0001886,,,,,,geospatial name,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/APOLLO_SV_00000211,transmission probability,,The probability of the occurence of an infection acquisition from one infected organism to another when in contact.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,APOLLO_SV:00000211,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/apollo_sv.owl,,,,,,,,,transmission probability,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The probability of the occurence of an infection acquisition from one infected organism to another when in contact.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_4309,dalfopristin,,A macrolide that is pristinamycin IIA in which the double bond between positions 26 and 26a of the pyrroline ring has been reduced and position 26<i>R</i> carries a [2-(diethylamino)ethyl]sulfonyl group. It is a semi-synthetic streptogramin antibiotic and often used as a mixture with quinupristin for the treatment of vancomycin-resistant <em>Enterococcus faecium</em>.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:42127,,,,,,CHEBI:4309,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,dalfopristin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A macrolide that is pristinamycin IIA in which the double bond between positions 26 and 26a of the pyrroline ring has been reduced and position 26<i>R</i> carries a [2-(diethylamino)ethyl]sulfonyl group. It is a semi-synthetic streptogramin antibiotic and often used as a mixture with quinupristin for the treatment of vancomycin-resistant <em>Enterococcus faecium</em>.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_1564,fungal infectious disease,,"A disease by infectious agent that results_in infection, has_material_basis_in Fungi, which pass the resistance barriers of the human or animal body.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:1564,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,fungal infectious disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A disease by infectious agent that results_in infection, has_material_basis_in Fungi, which pass the resistance barriers of the human or animal body.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_48924,erythromycin derivative,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:48924,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,erythromycin derivative,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020544,"piece of turkey breast (skinless, boneless, raw)",,A raw piece of skinless and boneless turkey breast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020544,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"piece of turkey breast (skinless, boneless, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw piece of skinless and boneless turkey breast.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00051448,"populated place, Cameroon",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00051448,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Cameroon",http://purl.obolibrary.org/obo/GAZ_00001093,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510246,high polyunsaturated fat,,"A claim that a food is high in polyunsaturated fat, and any claim likely to have the same meaning for the consumer, may only be made where at least 45 % of the fatty acids present in the product derive from polyunsaturated fat under the condition that polyunsaturated fat provides more than 20 % of energy of the product [COMMISSION REGULATION (EU) No 116/2010 of 9 February 2010 amending Regulation (EC) No 1924/2006 of the European Parliament and of the Council with regard to the list of nutrition claims].",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0246,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510246,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,high polyunsaturated fat,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A claim that a food is high in polyunsaturated fat, and any claim likely to have the same meaning for the consumer, may only be made where at least 45 % of the fatty acids present in the product derive from polyunsaturated fat under the condition that polyunsaturated fat provides more than 20 % of energy of the product [COMMISSION REGULATION (EU) No 116/2010 of 9 February 2010 amending Regulation (EC) No 1924/2006 of the European Parliament and of the Council with regard to the list of nutrition claims].",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001506,pathogen diagnostic testing field category,data slot category,,FALSE,,,,,,,PCDS:pathogen_diagnostic_testing_slot_group,,,,,,,,,,,,,,,,,,,,,,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,data slot category,,,,GENEPIO:0001506,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788,2022-11-23T00:33:27.896Z,,,,,,,,,,,,,,,,,,,pathogen diagnostic testing field category,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490104,"plastic squeeze bottle or tube, unlined top",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0104,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490104,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"plastic squeeze bottle or tube, unlined top",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HP_0012450,Chronic constipation,Infrequent bowel movements|Chronic constipation,"Constipation for longer than three months with fewer than 3 bowel movements per week, straining, lumpy or hard stools, and a sensation of anorectal obstruction or incomplete defecation.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0401149|SNOMEDCT_US:236069009,,,,,,,,,,,,,,,,,,,,,,,,,Infrequent bowel movements|Chronic constipation,,,,HP:0012450,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Chronic constipation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Constipation for longer than three months with fewer than 3 bowel movements per week, straining, lumpy or hard stools, and a sensation of anorectal obstruction or incomplete defecation.",,,,,,,,
http://purl.obolibrary.org/obo/HP_0012451,Acute constipation,,Constipation of sudden onset and lasting for less than three months.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0401148|SNOMEDCT_US:197119006,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0012451,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Acute constipation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Constipation of sudden onset and lasting for less than three months.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001120,CanCOGeN SARS-CoV-2 specification,The Canadian coronavirus 2019 Genomics Network severe acute respiratory syndrome coronavirus 2 specification|The Canadian COVID-19 Genomics Network severe acute respiratory syndrome coronavirus 2 specification|The Canadian COVID-19 Genomics Network SARS-CoV-2 specification,A data specification established for use by The Canadian COVID-19 Genomics Network (CanCOGeN) project for SARS-CoV-2 contextual data (metadata) harmonization and curation across data providers.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,The Canadian coronavirus 2019 Genomics Network severe acute respiratory syndrome coronavirus 2 specification|The Canadian COVID-19 Genomics Network severe acute respiratory syndrome coronavirus 2 specification|The Canadian COVID-19 Genomics Network SARS-CoV-2 specification,,,,GENEPIO:0001120,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788,2021-04-24T00:18:57Z,,,,,,,,,,,,,,,,,,,CanCOGeN SARS-CoV-2 specification,,,,,,,,,,,,,,,,,,,,,,https://github.com/cidgoh/pathogen-genomics-package,,,,,,,,,,A data specification established for use by The Canadian COVID-19 Genomics Network (CanCOGeN) project for SARS-CoV-2 contextual data (metadata) harmonization and curation across data providers.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0011443,Abnormality of coordination,Coordination issue|Abnormality of coordination,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4023353,,,,,,,,,,,,,,,,,,,,,,,,,Coordination issue|Abnormality of coordination,,,,HP:0011443,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormality of coordination,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HP_0011442,Abnormal central motor function,Abnormality of central motor function,An anomaly of the control or production of movement in the central nervous system.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4023354,,,,,,,,,,,,,,,,,,,,,,,,,Abnormality of central motor function,,,,HP:0011442,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal central motor function,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An anomaly of the control or production of movement in the central nervous system.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0011446,Abnormality of mental function,Abnormality of higher mental function,"Cognitive, psychiatric, or memory anomaly.",FALSE,,,,,,,,,,,,,,"This includes abnormalities in speech, mood, emotions, behavior, and cognition.",,,,,,,,,,,,,,,,,,UMLS:C4023352,,,,,,,,,,,,,,,,,,,,,,,,,Abnormality of higher mental function,,,,HP:0011446,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormality of mental function,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Cognitive, psychiatric, or memory anomaly.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03430136,disintegrated or ground,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=E0136,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03430136,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,disintegrated or ground,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001909,quantity unit,,Issue: this implicitly affects 'significant digits' datum.,FALSE,,,,,,,,,,,,,,Issue: this implicitly affects 'significant digits' datum.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001909,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,quantity unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_28963,amino sugar,,Any sugar having one or more alcoholic hydroxy groups replaced by substituted or unsubstituted amino groups.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:2662|CHEBI:22530|CHEBI:22481,,,,,,CHEBI:28963,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,amino sugar,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any sugar having one or more alcoholic hydroxy groups replaced by substituted or unsubstituted amino groups.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C50911,Sudden Cardiac Death,Sudden Cardiac Death|SCD,An unexpected natural death from a cardiac cause within a short time period from the onset of symptoms.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Sudden Cardiac Death|SCD,,,,NCIT:C50911,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Sudden Cardiac Death,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An unexpected natural death from a cardiac cause within a short time period from the onset of symptoms.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001795,de-identified data,,A 'de-identified data' role between a user and given data entails that the user is authorized to see only those fields (including those that are encrypted) which do not contain information that could be use to identify particular individuals (whether patients or medical practitioners) or potentially organizations in the case where an investigation may implicate them.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Damion Dooley's note: There is a case in the ""draft tuberculosis contextual data standard"" that has this be a boolean selection.  If a categorical field is linked directly, and it has no underlings, this indicates that it is being treated as a boolean feature.",,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001795,,,,Generally de-identified data should include HIPAA patient privacy fields as indicated in https://www.hipaa.com/hipaa-protected-health-information-what-does-phi-include/,,,,,,,,,,,,,,,,,,,,,,,,,,,,,de-identified data,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A 'de-identified data' role between a user and given data entails that the user is authorized to see only those fields (including those that are encrypted) which do not contain information that could be use to identify particular individuals (whether patients or medical practitioners) or potentially organizations in the case where an investigation may implicate them.,,,"help:In this dataset, selected data have been de-identified (anonymized) for access by dataset users.",,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100965,diagnostic measurement method,diagnostic measurement method 3|diagnostic measurement method 2|diagnostic measurement method 1,A data field which describes the method by which a diagnostic result was received.,FALSE,,,,,,,PCDS:diagnostic_measurement_method_*,,,,,,,PCDS: Select a value from the pick list provided to describe the method used for a given diagnostic test.,,,,,,,,,,,,,,PCDS: qPCR,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,diagnostic measurement method 3|diagnostic measurement method 2|diagnostic measurement method 1,,,,GENEPIO:0100965,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,diagnostic measurement method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the method by which a diagnostic result was received.,,PCDS: The method by which a diagnostic result was determined.,,,,,,
http://purl.obolibrary.org/obo/CHEBI_17087,ketone,,A compound in which a carbonyl group is bonded to two carbon atoms: R<small><sub>2</sub></small>C=O (neither R may be H).,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:8742|CHEBI:6127|CHEBI:24974|CHEBI:13646|CHEBI:13427,,,,,,CHEBI:17087,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,ketone,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A compound in which a carbonyl group is bonded to two carbon atoms: R<small><sub>2</sub></small>C=O (neither R may be H).,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000068,RiboPrinter DUP similarity,,Similarity of pattern to one of the patterns of the DuPont Identification library of the RiboPrinter,FALSE,,,,,,,,,,,,,,,,,,,,,http://www.tandfonline.com/doi/pdf/10.1080/09603120903254041,,,,,,,"The identification of an isolate was determined when the corresponding patterns matched one of the patterns of the DuPont Identification library of the RiboPrinter1 with a similarity of >0.85. The similarity threshold for an isolate joining a ribogroup is an adaptive value between 0.90 and 0.96, depending on the size of the ribogroup.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000068,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,,,,,,,RiboPrinter DUP similarity,,,,,Lab Analytic,,,,,,,,,,,,,,,,,,,,,,Riboprinter DUP similarity,,,NML Labware LIMS,,Similarity of pattern to one of the patterns of the DuPont Identification library of the RiboPrinter,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490295,"aluminium foil wrapper, coated for heat sealing",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0295,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490295,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"aluminium foil wrapper, coated for heat sealing",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002038,obsolete: antibiotic intermediate resistance (I),,Intermediate resistance indicates that an isolate is observed to offer an intermediate level of resistance to a given antibiotic.,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002038,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: antibiotic intermediate resistance (I),,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,http://purl.obolibrary.org/obo/NCIT_C85560,,,Intermediate resistance indicates that an isolate is observed to offer an intermediate level of resistance to a given antibiotic.,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0013792,intracerebral hemorrhage,"stroke, hemorrhagic",A cerebrovascular disorder characterized by bleeding into one or both cerebral hemispheres including the basal ganglia and the cerebral cortex. It is often associated with hypertension and craniocerebral trauma.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,icd11.foundation:873092535|UMLS:C2937358|SCTID:274100004|MESH:D002543|MEDGEN:423648|ICD9:431|EFO:0005669,,,,,,,,,,,,,,,,,,,,,,,,,"stroke, hemorrhagic",,,,MONDO:0013792,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,intracerebral hemorrhage,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A cerebrovascular disorder characterized by bleeding into one or both cerebral hemispheres including the basal ganglia and the cerebral cortex. It is often associated with hypertension and craniocerebral trauma.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0025323,Abnormal arterial physiology,,An anomaly of arterial function.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0025323,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal arterial physiology,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An anomaly of arterial function.,,,,,,,,
http://purl.obolibrary.org/obo/MPATH_108,disseminated intravascular coagulation,,"A syndrome consequent to uncontrolled activation of blood clotting factors leading to disseminated platelet lysis, and fibrin deposition, ultimately leading to bleeding and necrosis as a consequence of inhibition of fibrin polymerisation by degradation products.",FALSE,,,,,,,,,,,,,,Diagnosed by microthrombi in many organs.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MPATH:108,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mpath.owl,,,,,,,,,disseminated intravascular coagulation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A syndrome consequent to uncontrolled activation of blood clotting factors leading to disseminated platelet lysis, and fibrin deposition, ultimately leading to bleeding and necrosis as a consequence of inhibition of fibrin polymerisation by degradation products.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001102,predicted exposure end,,"A date-time datum that marks the predicted end of possible human or animal exposure to a pathogen agent, directly or indirectly, based on a suspected pathogen and first symptom date-time.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001102,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,predicted exposure end,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"A date-time datum that marks the predicted end of possible human or animal exposure to a pathogen agent, directly or indirectly, based on a suspected pathogen and first symptom date-time.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03301193,fish meat (raw),,"Fish meat that has not been cooked or preserved other than perhaps by freezing.  If previously frozen, it has subsequently been thawed.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://bioregistry.io/reference/siren:F1193,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03301193,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,fish meat (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Fish meat that has not been cooked or preserved other than perhaps by freezing.  If previously frozen, it has subsequently been thawed.",,,,,,,,
http://purl.obolibrary.org/obo/HP_0033454,Tube feeding,,Feeding problem necessitating food and nutrient delivery via a tube.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0033454,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Tube feeding,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Feeding problem necessitating food and nutrient delivery via a tube.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00002616,"populated place, Argentina",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00002616,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Argentina",http://purl.obolibrary.org/obo/GAZ_00002928,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HP_0000083,Renal insufficiency,Renal failure in adulthood|Renal failure,"A reduction in the level of performance of the kidneys in areas of function comprising the concentration of urine, removal of wastes, the maintenance of electrolyte balance, homeostasis of blood pressure, and calcium metabolism.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C1839604|UMLS:C1565489|UMLS:C0035078|SNOMEDCT_US:42399005|SNOMEDCT_US:236423003,,,,,,,,,,,,,,,,,,,,,,,HP:0004723|HP:0000084,,Renal failure in adulthood|Renal failure,,,,HP:0000083,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Renal insufficiency,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A reduction in the level of performance of the kidneys in areas of function comprising the concentration of urine, removal of wastes, the maintenance of electrolyte balance, homeostasis of blood pressure, and calcium metabolism.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000114,beef chuck neck roast (raw),,A raw beef chuck neck roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000114,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef chuck neck roast (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef chuck neck roast.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_63944,macrocyclic lactone,,Any lactone in which the cyclic carboxylic ester group forms a part of a cyclic macromolecule.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:50333,,,,,,CHEBI:63944,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,macrocyclic lactone,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any lactone in which the cyclic carboxylic ester group forms a part of a cyclic macromolecule.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0000938,categorical measurement datum,,A measurement datum that is reported on a categorical scale.,FALSE,,,,,,,nominal mesurement datum,,,,,,,,,,,,,,Bjoern Peters,,,,,categorical measurement datum,,,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/OBI_0001930,,,,,,,OBI:0000938,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,categorical measurement datum,,,,,,,,,,,,,,,,,,,,,,,,,,,,Bjoern Peters,,,,A measurement datum that is reported on a categorical scale.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510129,"\""free\""label claim",,"Considerations include amounts that are 'nutritionally trivial' and amounts that can be declared as zero on the nutrition label. An additional criterion based on amount per weight (e.g., per 100 grams) is not considered necessary because the amount of nutrient in a 'free' food is so low that even frequent and repeated consumption is unlikely to have physiological consequences. (U.S. proposed)",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0129,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510129,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"""free""label claim",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Considerations include amounts that are 'nutritionally trivial' and amounts that can be declared as zero on the nutrition label. An additional criterion based on amount per weight (e.g., per 100 grams) is not considered necessary because the amount of nutrient in a 'free' food is so low that even frequent and repeated consumption is unlikely to have physiological consequences. (U.S. proposed)",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_7025,mupirocin,,"An α,β-unsaturated ester resulting from the formal condensation of the alcoholic hydroxy group of 9-hydroxynonanoic acid with the carboxy group of (2<i>E</i>)-4-[(2<i>S</i>)-tetrahydro-2<em>H</em>-pyran-2-yl]-3-methylbut-2-enoic acid in which the tetrahydropyranyl ring is substituted at positions 3 and 4 by hydroxy groups and at position 5 by a {(2<i>S</i>,3<i>S</i>)-3-[(2<i>S</i>,3<i>S</i>)-3-hydroxybutan-2-yl]oxiran-2-yl}methyl group. Originally isolated from the Gram-negative bacterium <em>Pseudomonas fluorescens</em>, it is used as a topical antibiotic for the treatment of Gram-positive bacterial infections.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:44038,,,,,,CHEBI:7025,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,mupirocin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An α,β-unsaturated ester resulting from the formal condensation of the alcoholic hydroxy group of 9-hydroxynonanoic acid with the carboxy group of (2<i>E</i>)-4-[(2<i>S</i>)-tetrahydro-2<em>H</em>-pyran-2-yl]-3-methylbut-2-enoic acid in which the tetrahydropyranyl ring is substituted at positions 3 and 4 by hydroxy groups and at position 5 by a {(2<i>S</i>,3<i>S</i>)-3-[(2<i>S</i>,3<i>S</i>)-3-hydroxybutan-2-yl]oxiran-2-yl}methyl group. Originally isolated from the Gram-negative bacterium <em>Pseudomonas fluorescens</em>, it is used as a topical antibiotic for the treatment of Gram-positive bacterial infections.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000066,DuPont identification pattern library,,A dataset which is a library of RiboPrinter recognised patterns.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000066,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,,,,,,,DuPont identification pattern library,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A dataset which is a library of RiboPrinter recognised patterns.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490345,paper combined material,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0345,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490345,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,paper combined material,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0001268,peritoneal fluid,,Transudate contained in the peritoneal cavity.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ncithesaurus:Peritoneal_Fluid|Wikipedia:Peritoneal_fluid|MESH:D001202|MA:0002531|FMA:16515|EMAPA:35683|BTO:0001031,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0001268,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,peritoneal fluid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Transudate contained in the peritoneal cavity.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0101111,who oie fao h5 clade,,,FALSE,,,,,,,PCDS:who_oie_fao_h5_clade,,,,,,,,,,,,,,,,,,,,,,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0101111,,,,,,,,,,,,,,2026-04-13T17:16:47.336Z,,,,,,,,,,,,,,,,,,,who oie fao h5 clade,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GO_0051703,biological process involved in intraspecies interaction between organisms,intraspecies interaction with other organisms|intraspecies interaction between organisms,Any process in which an organism has an effect on an organism of the same species.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,intraspecies interaction with other organisms|intraspecies interaction between organisms,,,,GO:0051703,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/pco.owl,http://purl.oboInOwllibrary.org/oboInOwl/go#goslim_pir|http://purl.oboInOwllibrary.org/oboInOwl/go#gocheck_do_not_annotate,,,,,,,,biological process involved in intraspecies interaction between organisms,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any process in which an organism has an effect on an organism of the same species.,,,,,,,,
http://purl.obolibrary.org/obo/GO_0051701,biological process involved in interaction with host,growth of symbiont in host vacuole|growth of symbiont in host organelle|growth of symbiont in host cell|growth of symbiont in host,"An interaction between two organisms living together in more or less intimate association. The term host is used for the larger (macro) of the two members of a symbiosis; the various forms of symbiosis include parasitism, commensalism and mutualism.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Reactome:R-HSA-9658195|Reactome:R-HSA-9635486,,,,,,,,,,,,,,,,,,,,,,,GO:0044125|GO:0044123|GO:0044121|GO:0044119|GO:0044117|GO:0044116|GO:0044112,,interaction with host,growth of symbiont in host vacuole|growth of symbiont in host organelle|growth of symbiont in host cell|growth of symbiont in host,,,GO:0051701,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/apollo_sv.owl,,,,,,,,,biological process involved in interaction with host,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An interaction between two organisms living together in more or less intimate association. The term host is used for the larger (macro) of the two members of a symbiosis; the various forms of symbiosis include parasitism, commensalism and mutualism.",,,,,,,,
http://purl.obolibrary.org/obo/GO_0051704,multi-organism process,,A biological process which involves another organism of the same or different species.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GO:0051704,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/apollo_sv.owl,,,,,,,,,multi-organism process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A biological process which involves another organism of the same or different species.,,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000619,negative predictive value,,A proportion in which the numerator represents the correctly non-detected items within the denominator that represents all items not detected.,FALSE,,,,,,,,,,,,,,,,,,,,,COKA/SEVCO,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000619,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,negative predictive value,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Harold Lehmann, Ken Wilkins, Philippe Rocca-Serra, Joanne Dehnbostel",,,,A proportion in which the numerator represents the correctly non-detected items within the denominator that represents all items not detected.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C156428,Non-Cancer Related Death,Not Cancer Related|Non-Cancer Related Death|Non-Cancer Related|Non-Cancer Death,A death attributed to any cause other than the progression of a cancer-related pathologic condition.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Not Cancer Related|Non-Cancer Related Death|Non-Cancer Related|Non-Cancer Death,,,,NCIT:C156428,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Non-Cancer Related Death,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A death attributed to any cause other than the progression of a cancer-related pathologic condition.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C156427,Cancer-Related Death,Cancer-Related Death|Cancer Related Death|Cancer Related|Cancer Death,A death attributed to the progression of a cancer-related pathologic condition.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Cancer-Related Death|Cancer Related Death|Cancer Related|Cancer Death,,,,NCIT:C156427,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Cancer-Related Death,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A death attributed to the progression of a cancer-related pathologic condition.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_25703,organic phosphate,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:25703,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,organic phosphate,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0011953,stomach glandular region,,A region of the stomach that is lined with glandular epithelium.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0227197|SCTID:27633001|NCIT:C77661|MA:0001613|EMAPA:17623,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0011953,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,stomach glandular region,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A region of the stomach that is lined with glandular epithelium.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0011954,stomach non-glandular region,,A region of the stomach is lined with non-glandular epithelium. Examples of a stomach non-glandular region are found in rodents.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCIT:C77662|MA:0001625,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0011954,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,stomach non-glandular region,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A region of the stomach is lined with non-glandular epithelium. Examples of a stomach non-glandular region are found in rodents.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530108,food preperation,,"A food production process which involves post-harvest processes such as cleaning, sorting, cutting, mixing, shaping, cooking and packaging.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0108,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530108,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food preperation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A food production process which involves post-harvest processes such as cleaning, sorting, cutting, mixing, shaping, cooking and packaging.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102152,Ion GeneStudio S5 Plus,,"An Ion GeneStudio sequencing instrument model that utilises Ion semiconductor sequencing technology to deliver rapid, targeted sequencing with minimal input and scalable throughput; designed to run with 2 S5 chips.",FALSE,,,,,,,,,,,,,,,,,,,,,https://www.thermofisher.com/ca/en/home/life-science/sequencing/next-generation-sequencing/instruments/ion-genestudio-system/models.html,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102152,,,,,,,,,,,,,https://orcid.org/0000-0002-7654-6902|https://orcid.org/0000-0001-8008-8249,2025-03-21T01:14:47.111Z,,,,,,,,,,,,,,,,,,,Ion GeneStudio S5 Plus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An Ion GeneStudio sequencing instrument model that utilises Ion semiconductor sequencing technology to deliver rapid, targeted sequencing with minimal input and scalable throughput; designed to run with 2 S5 chips.",,,,,,,,
http://purl.obolibrary.org/obo/OBI_0002811,protective sleeve,,A personal protective clothing item which is a protective cover worn over the arm.,FALSE,,,,,,,,,,,,,,,,,,,,,https://www.safeopedia.com/definition/974/protective-sleeves,,,,,protective sleeve,,"A protective sleeve can be designed to provide protection from heat, welding spatter or hot metal, chemicals, sharp objects, paint or other liquids.",,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0002811,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,protective sleeve,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://orcid.org/0000-0002-8844-9165,,,https://github.com/obi-ontology/obi/issues/1193,A personal protective clothing item which is a protective cover worn over the arm.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530041,foot (meat cut),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0041,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530041,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,foot (meat cut),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000083,adapter sequence,,Adapters provide priming sequences for both amplification and sequencing of the sample-library fragments. Both adapters should be reported; in uppercase letters,FALSE,,,,,,,,,,,,,,,,,,,,,GROUP: MIxS,,,,,,,adapter A and B sequence,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000083,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,,,,,,,adapter sequence,,,,,Sequencing,,,,,,,,,,,,,,,,,,,,,,Adapters,,,Derived from Illumina Sample Sheet,,Adapters provide priming sequences for both amplification and sequencing of the sample-library fragments. Both adapters should be reported; in uppercase letters,,,,,,,,
http://purl.obolibrary.org/obo/HP_0001700,Myocardial necrosis,,Irreversible damage to heart tissue (myocardium) due to lack of oxygen after a heart attack (myocardial infarction).,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C1442837|SNOMEDCT_US:251061000,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0001700,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Myocardial necrosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Irreversible damage to heart tissue (myocardium) due to lack of oxygen after a heart attack (myocardial infarction).,,,,,,,,
http://purl.obolibrary.org/obo/IDO_0000590,chronic infectious disease course,,An infectious disease course that unfolds over a long period of time.,FALSE,,,,,,,persistent infectious disease course,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,IDO:0000590,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ido.owl,,,,,,,,,chronic infectious disease course,,,,,,,,,,,,,,,,,,,,,,,,,,,,Lindsay Cowell|Alexander Diehl|Albert Goldfain,,,,An infectious disease course that unfolds over a long period of time.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020705,poultry breast (raw),,A whole raw poultry breast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020705,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,poultry breast (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A whole raw poultry breast.,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000088,Kikuyu,,A Bantu Eastern population with a population size of 5.3 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000088,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Kikuyu,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Bantu Eastern population with a population size of 5.3 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000080,Masalit,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000080,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Masalit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000084,Bulu,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000084,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Bulu,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000087,Igbo,,A Western African population with a population size of >34 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000087,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Igbo,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Western African population with a population size of >34 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000085,Taita,,A Bantu Eastern population with a population size of 0.34 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000085,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Taita,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Bantu Eastern population with a population size of 0.34 millions,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C49493,Clinical Course Adverse Event,Clinical Course Adverse Event,A finding that refers to the nature and/or clinical outcome of an adverse event.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Clinical Course Adverse Event,,,,NCIT:C49493,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Clinical Course Adverse Event,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A finding that refers to the nature and/or clinical outcome of an adverse event.,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0004995,cardiovascular disorder,disorder of cardiovascular system|disease or disorder of cardiovascular system|disease of cardiovascular system|cardiovascular system disease or disorder|cardiovascular system disease|cardiovascular disorder|cardiovascular disease (CVD)|cardiovascular disease,A disease involving the cardiovascular system.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,icd11.foundation:426429380|icd11.foundation:424293435|UMLS:C0007222|SCTID:49601007|NCIT:C2931|NANDO:1100005|MESH:D002318|MEDGEN:2848|ICD9:459.9|ICD9:459.89|ICD9:429.89|ICD9:429.81|ICD9:429.8|ICD9:429.7|ICD9:429.2|ICD9:429|ICD9:424|ICD9:423.8|ICD9:423|ICD9:420-429|ICD9:390-459|ICD10CM:I00-I99|EFO:0000319|DOID:1287,,,,,,,,,,,,,,,,,,,,,,,,,disorder of cardiovascular system|disease or disorder of cardiovascular system|disease of cardiovascular system|cardiovascular system disease or disorder|cardiovascular system disease|cardiovascular disorder|cardiovascular disease (CVD)|cardiovascular disease,,,,MONDO:0004995,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#rare_grouping|http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar|http://purl.oboInOwllibrary.org/oboInOwl/mondo#harrisons_view,,,,,,,,cardiovascular disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A disease involving the cardiovascular system.,,,,,,,,
http://purl.obolibrary.org/obo/BTO_0000167,adenocarcinoma cell line,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,BTO:0000167,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/bto.owl,,,,,,,,,adenocarcinoma cell line,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_22315,alkaloid,,"Any of the naturally occurring, basic nitrogen compounds (mostly heterocyclic) occurring mostly in the plant kingdom, but also found in bacteria, fungi, and animals. By extension, certain neutral compounds biogenetically related to basic alkaloids are also classed as alkaloids. Amino acids, peptides, proteins, nucleotides, nucleic acids, amino sugars and antibiotics are not normally regarded as alkaloids. Compounds in which the nitrogen is  exocyclic (dopamine, mescaline, serotonin, etc.) are usually classed as amines rather than alkaloids.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:22315,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,alkaloid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Any of the naturally occurring, basic nitrogen compounds (mostly heterocyclic) occurring mostly in the plant kingdom, but also found in bacteria, fungi, and animals. By extension, certain neutral compounds biogenetically related to basic alkaloids are also classed as alkaloids. Amino acids, peptides, proteins, nucleotides, nucleic acids, amino sugars and antibiotics are not normally regarded as alkaloids. Compounds in which the nitrogen is  exocyclic (dopamine, mescaline, serotonin, etc.) are usually classed as amines rather than alkaloids.",,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000104,undersea feature,undersea valley|undersea tongue|undersea terrace|undersea spur|undersea slope|undersea sill|undersea shelf valley|undersea shelf edge|undersea shelf|undersea saddle|undersea rise|undersea ramp|undersea platform|undersea plain|undersea pinnacle|undersea peak|undersea moat|undersea median valley|undersea levee|undersea ledge|undersea hole|undersea gap|undersea furrow|undersea fracture zone|undersea fork|undersea fan|undersea cliff|undersea bench|undersea basin|undersea bank|shelf edge|saddle|rise (seafloor)|rise|ridges|ridge|ravine|ramp (seafloor)|ramp|province|platform|plateau|plain|pinnacle|moat (seafloor)|median valley|levee|ledge|hole (seafloor)|hole|gully|gap|furrow|forks|fork|flat|fan|escarpment|basin,A hydrographic feature which is located below the surface of a marine water body.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,TGN:23550|TGN:23467|TGN:23463|TGN:23461|TGN:23453|TGN:23431|TGN:23424|TGN:23423|TGN:23421|TGN:23415|TGN:23413|TGN:23412|TGN:23411|TGN:23301|TGN:23212|TGN:23211|TGN:23196|TGN:23195|TGN:23194|TGN:23193|TGN:23192|TGN:23188|TGN:23184|TGN:23183|TGN:23182|TGN:23181|TGN:23162|TGN:23135|TGN:23118|TGN:23117|TGN:23116|TGN:23001|Geonames:U.VLSU|Geonames:U.VALU|Geonames:U.TERU|Geonames:U.SPRU|Geonames:U.SILU|Geonames:U.SHVU|Geonames:U.SDLU|Geonames:U.RISU|Geonames:U.RDSU|Geonames:U.RDGU|Geonames:U.PRVU|Geonames:U.PNLU|Geonames:U.PLTU|Geonames:U.PLNU|Geonames:U.LEVU|Geonames:U.LDGU|Geonames:U.HOLU|Geonames:U.GLYU|Geonames:U.GAPU|Geonames:U.FURU|Geonames:U.FLTU|Geonames:U.FANU|Geonames:U.ESCU|Geonames:U.EDGU|Geonames:U.BSNU|Geonames:RMPU|Geonames:RAVU|Geonames:PLFU|Geonames:MDVU|Geonames:FRSU|Geonames:FRKU|FTT:984|FTT:810|FTT:5|FTT:1196|FTT:1195|FTT:1194|FTT:1193|FTT:1176|FTT:1137|FTT:1020|EcoLexicon:ravine|EcoLexicon:platform|EcoLexicon:fan,,,,,,,,,,,,,,,,,,,,,,,,,,undersea valley|undersea tongue|undersea terrace|undersea spur|undersea slope|undersea sill|undersea shelf valley|undersea shelf edge|undersea shelf|undersea saddle|undersea rise|undersea ramp|undersea platform|undersea plain|undersea pinnacle|undersea peak|undersea moat|undersea median valley|undersea levee|undersea ledge|undersea hole|undersea gap|undersea furrow|undersea fracture zone|undersea fork|undersea fan|undersea cliff|undersea bench|undersea basin|undersea bank|shelf edge|saddle|rise (seafloor)|rise|ridges|ridge|ravine|ramp (seafloor)|ramp|province|platform|plateau|plain|pinnacle|moat (seafloor)|median valley|levee|ledge|hole (seafloor)|hole|gully|gap|furrow|forks|fork|flat|fan|escarpment|basin,,,ENVO:00000104,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,undersea feature,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A hydrographic feature which is located below the surface of a marine water body.,,,,,,,,
http://purl.obolibrary.org/obo/OMIT_0026433,Biological Processes,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OMIT:0026433,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/omit.owl,,,,,,,,,Biological Processes,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510020,infant or toddler as food consumer,,"Food produced and marketed to supply the particular dietary needs of normal infants (21 CFR 105.65) or normal toddlers (age 1 to 2 years). Junior foods are included with the strained foods for infants up to one year. Foods fall in this category only if the label bears a statement such as 'baby food', 'strained food', 'junior food' or 'toddler food'.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0020,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510020,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,infant or toddler as food consumer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Food produced and marketed to supply the particular dietary needs of normal infants (21 CFR 105.65) or normal toddlers (age 1 to 2 years). Junior foods are included with the strained foods for infants up to one year. Foods fall in this category only if the label bears a statement such as 'baby food', 'strained food', 'junior food' or 'toddler food'.",,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0008903,lung cancer,"nonsmall cell lung cancer, susceptibility to, autosomal dominant, somatic mutation|nonsmall cell lung cancer, somatic|nonsmall cell lung cancer, response to tyrosine kinase inhibitor in, autosomal dominant, somatic mutation|malignant tumour of the lung|malignant tumour of lung|malignant tumor of the lung|malignant tumor of lung|malignant neoplasm of the lung|malignant neoplasm of lung|malignant lung tumour|malignant lung tumor|malignant lung neoplasm|lung cancer, susceptibility to, autosomal dominant, somatic mutation|lung cancer, somatic|lung cancer, resistance to, autosomal dominant, somatic mutation|lung cancer, protection against, autosomal dominant, somatic mutation|lung cancer|cancer of lung|adenocarcinoma of lung, somatic|adenocarcinoma of lung, response to tyrosine kinase inhibitor in, autosomal dominant, somatic mutation",A malignant neoplasm involving the lung.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0242379|SCTID:363358000|OMIM:211980|NCIT:C7377|MEDGEN:66885|ICD9:162.9|ICD9:162.8|ICD9:162.5|ICD9:162.4|ICD9:162.3|DOID:1324,,,,,,,,,,,,,,,,,,,,,,,,,"nonsmall cell lung cancer, susceptibility to, autosomal dominant, somatic mutation|nonsmall cell lung cancer, somatic|nonsmall cell lung cancer, response to tyrosine kinase inhibitor in, autosomal dominant, somatic mutation|malignant tumour of the lung|malignant tumour of lung|malignant tumor of the lung|malignant tumor of lung|malignant neoplasm of the lung|malignant neoplasm of lung|malignant lung tumour|malignant lung tumor|malignant lung neoplasm|lung cancer, susceptibility to, autosomal dominant, somatic mutation|lung cancer, somatic|lung cancer, resistance to, autosomal dominant, somatic mutation|lung cancer, protection against, autosomal dominant, somatic mutation|lung cancer|cancer of lung|adenocarcinoma of lung, somatic|adenocarcinoma of lung, response to tyrosine kinase inhibitor in, autosomal dominant, somatic mutation",,,,MONDO:0008903,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar|http://purl.oboInOwllibrary.org/oboInOwl/mondo#omim_susceptibility,,,,,,,,lung cancer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A malignant neoplasm involving the lung.,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_00003674,Gumuz,,A Nilotic Eastern population with a population size of 0.2 million,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:00003674,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Gumuz,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Nilotic Eastern population with a population size of 0.2 million,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C54642,Alpha-3 Country Code,ISO 3166-1 Alpha-3 Country Code|Alpha-3 Country Code,The three-letter country codes specified by the ISO 3166-1 country code standard.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ISO 3166-1 Alpha-3 Country Code|Alpha-3 Country Code,,,,NCIT:C54642,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Alpha-3 Country Code,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The three-letter country codes specified by the ISO 3166-1 country code standard.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00003343,filet mignon (North America),,"A steak cut of beef taken from the smaller end of the tenderloin, or psoas major of the cow carcass, usually a steer or heifer.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00003343,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,filet mignon (North America),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A steak cut of beef taken from the smaller end of the tenderloin, or psoas major of the cow carcass, usually a steer or heifer.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C25198,Record,record|Record,"Anything (e.g., a document) providing permanent evidence of or information about past events.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,record|Record,,,,NCIT:C25198,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Record,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Anything (e.g., a document) providing permanent evidence of or information about past events.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001865,2D coordinate system,,A 2D coordinate system is a coordinate system in 2 dimensional space.  Each coordinate is composed of an offset from the origin of each dimension,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0001864,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001865,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,2D coordinate system,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A 2D coordinate system is a coordinate system in 2 dimensional space.  Each coordinate is composed of an offset from the origin of each dimension,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_26394,purine nucleoside,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:26394,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,purine nucleoside,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0060514,Atlantic cod allergy,,A fish allergy triggered by Gadus morhua.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0060514,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,Atlantic cod allergy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A fish allergy triggered by Gadus morhua.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0060510,peach allergy,,A fruit allergy triggered by Prunus persica plant fruit food product.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0060510,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,peach allergy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A fruit allergy triggered by Prunus persica plant fruit food product.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0060515,Atlantic salmon allergy,,A fish allergy triggered by Salmo salar.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0060515,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,Atlantic salmon allergy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A fish allergy triggered by Salmo salar.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0060518,rainbow trout allergy,,A fish allergy triggered by Oncorhynchus mykiss.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0060518,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,rainbow trout allergy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A fish allergy triggered by Oncorhynchus mykiss.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0060512,tomato allergy,,A fruit allergy triggered by Solanum lycopersicum plant fruit food product.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0060512,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,tomato allergy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A fruit allergy triggered by Solanum lycopersicum plant fruit food product.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0060516,carp allergy,,A fish allergy triggered by Cyprinus carpio.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0060516,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,carp allergy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A fish allergy triggered by Cyprinus carpio.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0060517,zebrafish allergy,,A fish allergy triggered by Danio rerio.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0060517,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,zebrafish allergy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A fish allergy triggered by Danio rerio.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0060511,plum allergy,,A fruit allergy triggered by Prunus domestica plant fruit food product.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0060511,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,plum allergy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A fruit allergy triggered by Prunus domestica plant fruit food product.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0060513,fish allergy,,A food allergy triggered by fish.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0060513,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,fish allergy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A food allergy triggered by fish.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0001560,neck of organ,organ neck,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:45733,,,,,,,,,,,,,,,,,,,,,,,,,organ neck,,,,UBERON:0001560,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,neck of organ,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_29673,rifamycin SV,,A member of the class of rifamycins that exhibits antibiotic and antitubercular properties.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:29673,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,rifamycin SV,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A member of the class of rifamycins that exhibits antibiotic and antitubercular properties.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102293,prior pathogen infection isolate ID,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,uncurated,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102293,,,,,,,,,,,,,,2026-04-09T18:02:29.914Z,,,,,,,,,,,,,,,,,,,prior pathogen infection isolate ID,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/COB_0001000,exposure of organism,,A process during which an organism comes into contact with another entity.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,COB:0001000,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/cob.owl,,,,,,,,,exposure of organism,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A process during which an organism comes into contact with another entity.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100354,rotational worker role,,A role inhering in a person that is realized when the bearer is an employee that performs labor which rotates according to a schedule.,FALSE,,,,,,,Rotational Worker,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100354,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,rotational worker role,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A role inhering in a person that is realized when the bearer is an employee that performs labor which rotates according to a schedule.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510078,no salt added claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0078,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510078,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,no salt added claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_4376,milk allergy,,"A food allergy that results in adverse immune reaction to one or more of the proteins in cow's milk and/or the milk of other animals, which are normally harmless to the non-allergic individual.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:4376,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,milk allergy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A food allergy that results in adverse immune reaction to one or more of the proteins in cow's milk and/or the milk of other animals, which are normally harmless to the non-allergic individual.",,,,,,,,
http://purl.obolibrary.org/obo/MP_0002133,abnormal respiratory system physiology,respiratory system: respiratory distress/failure/functional anomalies|respiratory system physiology abnormalities|respiratory system dysfunction,any functional anomaly of the pulmonary system; inability or reduced ability to intake and exchange oxygen and carbon dioxide with the environment,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MGI:2173593,,,,,,,,,,,,,,,,,,,,,,,,,respiratory system: respiratory distress/failure/functional anomalies|respiratory system physiology abnormalities|respiratory system dysfunction,,,,MP:0002133,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mp.owl,,,,,,,,,abnormal respiratory system physiology,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,any functional anomaly of the pulmonary system; inability or reduced ability to intake and exchange oxygen and carbon dioxide with the environment,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00004166,"cut of beef, mexican",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00004166,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"cut of beef, mexican",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C100128,Partner,Partner,A person that is associated with another person in some manner or action.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Partner,,,,NCIT:C100128,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Partner,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A person that is associated with another person in some manner or action.,,,,,,,,
http://purl.obolibrary.org/obo/IAO_0000009,datum label,,A label is a symbol that is part of some other datum and is used to either partially define  the denotation of that datum or to provide a means for identifying the datum as a member of the set of data with the same label,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,http://www.golovchenko.org/cgi-bin/wnsearch?q=label#4n,datum label,,,,,http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,IAO:0000009,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/iao.owl,,,,,,,,,datum label,,,,,,,,,,,,,,,,,,,,,,,,,,,,GROUP: IAO,,,,A label is a symbol that is part of some other datum and is used to either partially define  the denotation of that datum or to provide a means for identifying the datum as a member of the set of data with the same label,,,,,,,,
http://purl.obolibrary.org/obo/DOID_1100,ovarian disease,,A female reproductive system disease that is located_in the ovary.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:1100,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,ovarian disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A female reproductive system disease that is located_in the ovary.,,,,,,,,
http://purl.obolibrary.org/obo/IDO_0000540,infectious agent vector,,An organism bearing an infectious agent vector role.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,IDO:0000540,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ido.owl,,,,,,,,,infectious agent vector,,,,,,,,,,,,,,,,,,,,,,,,,,,,Lindsay Cowell|Alexander Diehl|Albert Goldfain,,,,An organism bearing an infectious agent vector role.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C80082,Neonatal Death,Neonatal Death|Death neonatal,Death of a live newborn during the first 28 days of life.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Neonatal Death|Death neonatal,,,,NCIT:C80082,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Neonatal Death,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Death of a live newborn during the first 28 days of life.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00003730,Province (Indonesia),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00003730,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Province (Indonesia),http://purl.obolibrary.org/obo/GAZ_00003727,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00003731,Bali Province,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00003731,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Bali Province,http://purl.obolibrary.org/obo/GAZ_00003734,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C42694,Login Name,Username|User Name|User ID|Login Name|Account Name,The account name used by a person to access a computer system.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Username|User Name|User ID|Login Name|Account Name,,,,NCIT:C42694,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Login Name,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The account name used by a person to access a computer system.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510014,sheep or goat as consumer,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0014,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510014,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,sheep or goat as consumer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00001018,State (Nigeria),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00001018,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,State (Nigeria),http://purl.obolibrary.org/obo/GAZ_00000912,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00001016,Capital Territory (Nigeria),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00001016,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Capital Territory (Nigeria),http://purl.obolibrary.org/obo/GAZ_00000912,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02010319,animal chop (boneless),,A boneless animal chop.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02010319,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,animal chop (boneless),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A boneless animal chop.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_11247,disseminated intravascular coagulation,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:11247,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,disseminated intravascular coagulation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000130,"beef strip steak (bone-in, raw)",,A raw beef strip steak that contains bone material.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000130,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"beef strip steak (bone-in, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef strip steak that contains bone material.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000077,obsolete: GSCID-BRC data item,,A GSCID/BRC data item is a field in one of the GSCID/BRC Project and Sample Application Standard subsets.,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000103,,,,,,,,,,,,,,,,,,,GENEPIO:0000077,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: GSCID-BRC data item,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A GSCID/BRC data item is a field in one of the GSCID/BRC Project and Sample Application Standard subsets.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000044,primary enzyme (LMAAI),,Restriction enzyme for first characterization,FALSE,,,,,,,,,,,,,,,,,,,,,GROUP: IRIDA Ontology (Emma),,,,,,,"pick list (XbaI, BlnI)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000044,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,primary enzyme (LMAAI),,,,,Lab Analytic,,,,,,,,,,,,,,,,,,,,,,Host Primary Enzyme,,,PulseNet Data Capture,,Restriction enzyme for first characterization,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100076,chronic gastrointestinal disease,,A persistent disease that affects the gastrointestinal tract.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100076,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,chronic gastrointestinal disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A persistent disease that affects the gastrointestinal tract.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510191,"infant as food consumer, 6 - 12 months",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0191,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510191,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"infant as food consumer, 6 - 12 months",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100274,sample has epidemiological link to Omicron variant strategy,,A variant surveillance strategy in which a sample is sequenced because the individual from which the sample is derived has a known epidemiological link to an Omicron variant case.,FALSE,,,,,,,Sample has epidemiological link to Omicron Variant,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100274,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,sample has epidemiological link to Omicron variant strategy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A variant surveillance strategy in which a sample is sequenced because the individual from which the sample is derived has a known epidemiological link to an Omicron variant case.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470178,high temperature short time (HTST) pasteurization,,"High Temperature Short Time (HTST) pasteurization is one of the most common methods of pasteurization , which uses metal plates and hot water to raise milk temperatures to at least 72° C (161° F) for not less than 15 seconds, followed by rapid cooling.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0178,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470178,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,high temperature short time (HTST) pasteurization,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"High Temperature Short Time (HTST) pasteurization is one of the most common methods of pasteurization , which uses metal plates and hot water to raise milk temperatures to at least 72° C (161° F) for not less than 15 seconds, followed by rapid cooling.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000055,Stx toxin subtype datum,,A shiga toxin variant.,FALSE,,,,,,,,,,,,,,,,,,,,,GROUP: IRIDA Ontology (Emma),,,,,,,"stx1a, stx1c",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000055,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,http://purl.obolibrary.org/obo/NCIT_C1225,,,,,,Stx toxin subtype datum,,,,,Lab Analytic,,,,,,,,,,,,,,,,,,,,,,Stx toxin subtype,,,metadata feedback,,A shiga toxin variant.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001500,lineage/clade name,lineage/clade name,A data field which describes the name of the lineage or clade.,FALSE,,,,,,,PCDS:lineage_clade_name,,,,,,,PCDS: Provide the lineage/clade name.,,,,,,,,,,,,,,PCDS: F.4,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,lineage/clade name,lineage/clade name slot|lineage or clade name slot|lineage or clade name field,,,,GENEPIO:0001500,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,lineage/clade name,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the name of the lineage or clade.,,PCDS: The name of the lineage or clade.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002174,specimen source substance specification,,"A data specification for a specimen source substance, which is an organism substance or food product or environmental substance from which the specimen was extracted.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002174,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0000134,,,,,,specimen source substance specification,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"A data specification for a specimen source substance, which is an organism substance or food product or environmental substance from which the specimen was extracted.",,,,,,,,
http://www.ebi.ac.uk/efo/EFO_0000714,survival time,time of survival|survival,"Time of survival is an information entity which is about the length of time a material entity has survived after some adverse event, such as infection from a disease.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SNOMEDCT:445320007|PERSON: James Malone|NCIt:C17177|MESH:D013534,,,,,,,,,,,,,,,,,,,,,,,,,time of survival|survival,,,,efo:EFO_0000714,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,survival time,,,,,,,,,,,,,,,,,,,,,,,,,,,,James Malone,,,,"Time of survival is an information entity which is about the length of time a material entity has survived after some adverse event, such as infection from a disease.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0101117,genetic target region,,,FALSE,,,,,,,PCDS:genetic_target_region,,,,,,,,,,,,,,,,,,,,,,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0101117,,,,,,,,,,,,,,2026-04-13T17:18:02.461Z,,,,,,,,,,,,,,,,,,,genetic target region,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PCDS: The specific region or segment of a genetic sequence used for testing or analysis.,,,,,,
http://purl.obolibrary.org/obo/ARO_3004369,Société Française de Microbiologie (SFM),,"The French Society of Microbiology (SFM) is a non-profit association which aims to bring together microbiologists from French-speaking countries, working in the domains of bacteria, viruses, Fungi and parasites, and related medical, industrial and environmental microbiology, physiology, genetics, taxonomy, hygiene, and antimicrobial agents. Baquero F. found that the SFM system recommends higher breakpoints than the consensus standard of all systems for antimicrobial susceptibility testing used in Europe (BSAC, DIN, SFM, SIR, NCCLS and WRG).",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SFM,,,,,,ARO:3004369,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/aro.owl,,,,,,,,,Société Française de Microbiologie (SFM),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The French Society of Microbiology (SFM) is a non-profit association which aims to bring together microbiologists from French-speaking countries, working in the domains of bacteria, viruses, Fungi and parasites, and related medical, industrial and environmental microbiology, physiology, genetics, taxonomy, hygiene, and antimicrobial agents. Baquero F. found that the SFM system recommends higher breakpoints than the consensus standard of all systems for antimicrobial susceptibility testing used in Europe (BSAC, DIN, SFM, SIR, NCCLS and WRG).",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02021249,lamb chop (boneless),,A boneless lamb chop.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02021249,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lamb chop (boneless),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A boneless lamb chop.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000074,dam,,A barrier constructed across a watercourse to control the flow or raise the level of water.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Dam|TGN:51253|SWEETRealm:Dam|Geonames:S.DAM|FTT:600|FTT:599|EcoLexicon:dam,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00000074,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,dam,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A barrier constructed across a watercourse to control the flow or raise the level of water.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000974,food kiosk,,A kiosk from which food products are sold.,FALSE,,,,,,,,,,,,,,This definition of kiosk is characteristic of the Western hemisphere and used in English-speaking countries.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01000974,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,food kiosk,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A kiosk from which food products are sold.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_03000033,marine sediment,marine sediments,"Sediment which has been transported through the marine water column, settling on the seafloor.",FALSE,,,,,,,,,,,,,,"Particles of marine sediment are primarily generated by 1) processes in terrestrial systems and transported to the marine realm by the action of rivers or aeolian processes (amongst other routes) , 2) marine organisms, 3) chemical processes in seawater, or 4) cosmogeneous input.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,marine sediments,,,,ENVO:03000033,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,envoPolar,,,,,,,,marine sediment,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://orcid.org/0000-0002-3410-4655|https://orcid.org/0000-0002-4366-3088,,,,"Sediment which has been transported through the marine water column, settling on the seafloor.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_9305,splenic tuberculosis,,An abdominal tuberculosis that results_in formation of granulomas or abscesses located_in spleen.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:9305,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,splenic tuberculosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An abdominal tuberculosis that results_in formation of granulomas or abscesses located_in spleen.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0050598,extrapulmonary tuberculosis,,A tuberculosis that occurs at body sites other than the lung.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0050598,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,extrapulmonary tuberculosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A tuberculosis that occurs at body sites other than the lung.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0050599,abdominal tuberculosis,,"An extrapulmonary tuberculosis that is located_in gastrointestinal tract, located_in peritoneum, located_in omentum, located_in mesentery, located_in liver, located_in spleen or located_in pancreas.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0050599,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,abdominal tuberculosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An extrapulmonary tuberculosis that is located_in gastrointestinal tract, located_in peritoneum, located_in omentum, located_in mesentery, located_in liver, located_in spleen or located_in pancreas.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000291,pork loin blade chop (raw),,A raw pork loin blade chop.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000291,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pork loin blade chop (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw pork loin blade chop.,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_590,Salmonella,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,Salmonella,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:590,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Salmonella,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C17598,Prosthesis,prosthesis|Prosthesis|Prostheses,"A device which is an artificial substitute for a missing body part or function; used for functional or cosmetic reasons, or both.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,prosthesis|Prosthesis|Prostheses,,,,NCIT:C17598,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Prosthesis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A device which is an artificial substitute for a missing body part or function; used for functional or cosmetic reasons, or both.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100664,quality control issues enumeration,,A data enumeration which references a set of named quality control issues entities.,FALSE,,,,,,,quality control issues,,,,,,,,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100664,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788,2023-01-23T00:42:19.315Z,,,,,,,,,,,,,,,,,,,quality control issues enumeration,,,,http://purl.obolibrary.org/obo/GENEPIO_0100575|http://purl.obolibrary.org/obo/GENEPIO_0100574|http://purl.obolibrary.org/obo/GENEPIO_0100573|http://purl.obolibrary.org/obo/GENEPIO_0100572|http://purl.obolibrary.org/obo/GENEPIO_0100571|http://purl.obolibrary.org/obo/GENEPIO_0100570|http://purl.obolibrary.org/obo/GENEPIO_0100569|http://purl.obolibrary.org/obo/GENEPIO_0100568,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data enumeration which references a set of named quality control issues entities.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_03501212,handrail,"rail, railing",A pole which provides stability or support when grasped by the hand.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"rail, railing",hand rail,,,,ENVO:03501212,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,handrail,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A pole which provides stability or support when grasped by the hand.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020498,"turkey breast (with skin, raw)",,A raw turkey breast that contains skin.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020498,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"turkey breast (with skin, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw turkey breast that contains skin.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03450014,boiling in container,,A cooking in water or water-based liquid process in which the liquid is boiling.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=G0014,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03450014,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,boiling in container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A cooking in water or water-based liquid process in which the liquid is boiling.,,,,,,,,
http://purl.obolibrary.org/obo/ARO_3004395,flow cytofluorometric method,,"Microbes exposed to antimicrobial agents are then stained with the intercalating agent propidium iodide. Damaged cells emit a positive signal that is detected by flow cytometry analysis. Flow cytometry can also be used to discriminate between dead, damaged and live cells.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ARO:3004395,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/aro.owl,,,,,,,,,flow cytofluorometric method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Microbes exposed to antimicrobial agents are then stained with the intercalating agent propidium iodide. Damaged cells emit a positive signal that is detected by flow cytometry analysis. Flow cytometry can also be used to discriminate between dead, damaged and live cells.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510264,qualified health claim,,"In the United States, these claims, usually referred to as ""qualified health claims"", are regulated by the Food and Drug Administration in the public interest, see 21 Code of Federal Regulations § 101.14 [http://www.accessdata.fda.gov/scripts/cdrh/cfdocs/cfcfr/CFRSearch.cfm?fr=101.14]",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0264,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510264,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,qualified health claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"In the United States, these claims, usually referred to as ""qualified health claims"", are regulated by the Food and Drug Administration in the public interest, see 21 Code of Federal Regulations § 101.14 [http://www.accessdata.fda.gov/scripts/cdrh/cfdocs/cfcfr/CFRSearch.cfm?fr=101.14]",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530129,collier,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0129,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530129,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,collier,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0035279,supraclavicular lymph node,supraclavicular node|nodus lymphaticus supraclavicularis axillae,A lymph node which is located above the clavicle.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Supraclavicular_lymph_nodes|UMLS:C0229730|SCTID:245325004|NCIT:C12903|FMA:14192,,,,,,,,,,,,,,,,,,,,,,,,,supraclavicular node|nodus lymphaticus supraclavicularis axillae,,,,UBERON:0035279,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,supraclavicular lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A lymph node which is located above the clavicle.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_18203,penicillin N,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:7964|CHEBI:25867|CHEBI:14744,,,,,,CHEBI:18203,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,penicillin N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/OBA_2040159,age of onset of hypertensive disorder,age hypertensive disorder symptoms begin|age at onset of hypertensive disorder,The age at which hypertensive disorder manifestations first appear.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,age hypertensive disorder symptoms begin|age at onset of hypertensive disorder,,,,OBA:2040159,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age of onset of hypertensive disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The age at which hypertensive disorder manifestations first appear.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510226,food allergen labelling about cocoa and products thereof,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0226,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510226,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food allergen labelling about cocoa and products thereof,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C18850,"Infant Mortality, Non-AIDS","Infant Mortality, Non-AIDS",infant death due to causes other than AIDS,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Infant Mortality, Non-AIDS",,,,NCIT:C18850,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,"Infant Mortality, Non-AIDS",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,infant death due to causes other than AIDS,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_595,Salmonella enterica subsp. enterica serovar Infantis,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,Salmonella enterica subsp. enterica serovar Infantis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:595,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Salmonella enterica subsp. enterica serovar Infantis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100611,input sequence length measurement datum,,A sequence length measurement datum about a input sequence being analyzed.,FALSE,,,,,,,,,,,,,,,,,,,,,Emma Griffiths,,,,,input sequence length measurement datum,,701bp,,,ready for release,http://purl.obolibrary.org/obo/OBI_0002890,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100611,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,input sequence length measurement datum,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-1107-9135,,,https://github.com/obi-ontology/obi/issues/1579,A sequence length measurement datum about a input sequence being analyzed.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000326,pork arm roast,,A pork roast that is derived from the picnic sub-primal of the shoulder primal.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000326,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pork arm roast,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A pork roast that is derived from the picnic sub-primal of the shoulder primal.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002117,swabbing for specimen collection,,The process of collecting specimen material using a swab collection device.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002117,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,swabbing for specimen collection,,,,,,,,,,,,,,,,,,,,,,,,,,,,Emma Griffiths,,,,The process of collecting specimen material using a swab collection device.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_2122,pneumonic tularemia,,"A tularemia that is located_in lungs. The bacteria are transmitted_by breathing dusts or aerosols containing the organisms. The infection has_symptom cough, has_symptom chest has_symptom pain, and has_symptom difficulty breathing.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:2122,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,pneumonic tularemia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A tularemia that is located_in lungs. The bacteria are transmitted_by breathing dusts or aerosols containing the organisms. The infection has_symptom cough, has_symptom chest has_symptom pain, and has_symptom difficulty breathing.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001940,library selection,,"Whether any method was used to select for or against, enrich, or screen the material being sequenced.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI SRA: LIBRARY_SELECTION,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001940,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,library selection,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,https://www.ncbi.nlm.nih.gov/books/NBK54984/table/SRA_Glossary_BK.T._library_descriptor_te/?report=objectonly,,"Whether any method was used to select for or against, enrich, or screen the material being sequenced.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_75606,hydroxamic acid ester,,A carboxamide that is a hydroxamic acid in which the hydrogen of the hydroxy group is replaced by an organyl group.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:75606,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,hydroxamic acid ester,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A carboxamide that is a hydroxamic acid in which the hydrogen of the hydroxy group is replaced by an organyl group.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C15843,Preventive Intervention,prophylaxis|prevention|Prophylaxis|Prophylactic|Preventive Intervention|Prevention Measures|Prevention|PRYLX|PREVENTATIVE,"Therapeutic, nutritional, environmental, social and/or behavioral interventions at the societal, community, organizational or individual levels to reduce, modify or stop the course of a disease.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,prophylaxis|prevention|Prophylaxis|Prophylactic|Preventive Intervention|Prevention Measures|Prevention|PRYLX|PREVENTATIVE,,,,NCIT:C15843,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Preventive Intervention,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Therapeutic, nutritional, environmental, social and/or behavioral interventions at the societal, community, organizational or individual levels to reduce, modify or stop the course of a disease.",,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0841,Tajik in Tajikistan (SGDP),Tajik,A population made up of 2 samples from Tajik individuals recruited in Tajikistan as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Tajik,,,,HANCESTRO:0841,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Tajik in Tajikistan (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Tajik individuals recruited in Tajikistan as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0844,Yemenite Jew in Yemen (SGDP),Yemenite Jew,A population made up of 2 samples from Yemenite Jew individuals recruited in Yemen as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Yemenite Jew,,,,HANCESTRO:0844,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Yemenite Jew in Yemen (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Yemenite Jew individuals recruited in Yemen as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0842,Turkish in Turkey (SGDP),Turkish,A population made up of 2 samples from Turkish individuals recruited in Turkey as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Turkish,,,,HANCESTRO:0842,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Turkish in Turkey (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Turkish individuals recruited in Turkey as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0843,Tuscan in Italy(Tuscany) (SGDP),Tuscan,A population made up of 2 samples from Tuscan individuals recruited in Italy(Tuscany) as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Tuscan,,,,HANCESTRO:0843,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Tuscan in Italy(Tuscany) (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Tuscan individuals recruited in Italy(Tuscany) as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0840,Spanish in Spain (SGDP),Spanish,A population made up of 2 samples from Spanish individuals recruited in Spain as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Spanish,,,,HANCESTRO:0840,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Spanish in Spain (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Spanish individuals recruited in Spain as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0845,Indigenous Siberian ancestry,Indigenous peoples of Siberia|Indigenous Siberian,"Includes individuals who either self-report or have been described by authors as Indigenous Siberan. This covers any indigenous groups from the northern part of the Asian contient that is commonly referred to as Siberia and which reaches from the Ural Mountains in the west to the Pacific Ocean in the east, and from the Arctic Ocean in the north to the northern borders of Kazakhstan, Mongolia and China in the south. We note that there does not appear to be a suitable reference population for this population and efforts are required to fill this gap, although smaller reference populations were defined by the SGDP. Principal-component analysis of samples from this population suggest a close genetic relatedness with some Indigenous North American populations, such as the Chipewyan.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Indigenous peoples of Siberia|Indigenous Siberian,,,,HANCESTRO:0845,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Indigenous Siberian ancestry,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Includes individuals who either self-report or have been described by authors as Indigenous Siberan. This covers any indigenous groups from the northern part of the Asian contient that is commonly referred to as Siberia and which reaches from the Ural Mountains in the west to the Pacific Ocean in the east, and from the Arctic Ocean in the north to the northern borders of Kazakhstan, Mongolia and China in the south. We note that there does not appear to be a suitable reference population for this population and efforts are required to fill this gap, although smaller reference populations were defined by the SGDP. Principal-component analysis of samples from this population suggest a close genetic relatedness with some Indigenous North American populations, such as the Chipewyan.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_13238,Haverhill fever,,"A primary bacterial infectious disease that results_in infection, has_material_basis_in Streptobacillus moniliformis, which is transmitted_by contact with urine or secretions from the mouth, eye, or nose of an infected animal or transmitted_by bite of an infected animal, especially rat. The infection has_symptom chills, has_symptom fever, has_symptom rash and has_symptom joint pain.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:13238,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,Haverhill fever,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A primary bacterial infectious disease that results_in infection, has_material_basis_in Streptobacillus moniliformis, which is transmitted_by contact with urine or secretions from the mouth, eye, or nose of an infected animal or transmitted_by bite of an infected animal, especially rat. The infection has_symptom chills, has_symptom fever, has_symptom rash and has_symptom joint pain.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510212,reduced {name of nutrient} nutrition claim,,"A claim stating that the content in one or more nutrients has been reduced, and any claim likely to have the same meaning for the consumer, may only be made where the reduction in content is at least 30 % compared to a similar product, except for micronutrients, where a 10 % difference in the reference values as set in Directive 90/496/EEC shall be acceptable, and for sodium, or the equivalent value for salt, where a 25 % difference shall be acceptable. [REGULATION (EC) No 1924/2006 Corrigendum 2007-01-18].",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0212,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510212,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,reduced {name of nutrient} nutrition claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A claim stating that the content in one or more nutrients has been reduced, and any claim likely to have the same meaning for the consumer, may only be made where the reduction in content is at least 30 % compared to a similar product, except for micronutrients, where a 10 % difference in the reference values as set in Directive 90/496/EEC shall be acceptable, and for sodium, or the equivalent value for salt, where a 25 % difference shall be acceptable. [REGULATION (EC) No 1924/2006 Corrigendum 2007-01-18].",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001711,Ascl,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001711,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Ascl,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490169,"aluminum tube, top lined with laminate",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0169,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490169,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"aluminum tube, top lined with laminate",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/T4FS_0000372,data stewardship technical concept,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,T4FS:0000372,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/t4fs.owl,,,,,,,,,data stewardship technical concept,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://orcid.org/0000-0003-2687-1982|https://orcid.org/0000-0002-7702-4495,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100738,plasmid type characterization data tag,plasmid type data type,A molecular characterization data tag which indicates the presence of plasmid type characterization data.,FALSE,,,,,,,plasmid type,,,,,,,Example Guidance: Use this tag to indicate additional data is available that provides characterization information from typing plasmids.,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,plasmid type data type,,,,GENEPIO:0100738,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-05-18T19:08:34.869Z,,,,,,,,,,,,,,,,,,,plasmid type characterization data tag,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A molecular characterization data tag which indicates the presence of plasmid type characterization data.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C19067,Title,title|Title,An identifying designation.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,title|Title,,,,NCIT:C19067,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Title,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An identifying designation.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02021757,pork steak,,A pork meat cut that has a flat-cut appearance.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02021757,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pork steak,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A pork meat cut that has a flat-cut appearance.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100816,fecal contamination unit,fecal contamination unit|faecal contamination unit,An environmental data field which describes the units of a measurement of fecal contamination.,FALSE,,,,,,,PCDS:fecal_contamination_unit,,,,,,,PCDS: Provide the units of the measured fecal contamination.,,,,,,,,,,,,,,PCDS: cycle threshold (Ct) / quantification cycle (Cq),,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,fecal contamination unit|faecal contamination unit,fecal contamination unit slot|faecal contamination unit slot,,,,GENEPIO:0100816,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,fecal contamination unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the units of a measurement of fecal contamination.,,PCDS: The units of a measurement of fecal contamination.,,,,,,
http://purl.obolibrary.org/obo/UBERON_0015228,circulatory organ,circulatory vessel,"A hollow, muscular organ, which, by contracting rhythmically, contributes to the circulation of lymph, blood or analogs. Examples: a chambered vertebrate heart; the tubular peristaltic heart of ascidians; the dorsal vessel of an insect; the lymoh heart of a reptile.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,heart,heart or heart like organ|cardiac pump,circulatory vessel,,,UBERON:0015228,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,circulatory organ,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A hollow, muscular organ, which, by contracting rhythmically, contributes to the circulation of lymph, blood or analogs. Examples: a chambered vertebrate heart; the tubular peristaltic heart of ascidians; the dorsal vessel of an insect; the lymoh heart of a reptile.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530135,quartier arriere,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0135,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530135,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,quartier arriere,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038587,paracardiac lymph node,paracardiac node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:265350,,,,,,,,,,,,,,,,,,,,,,,,,paracardiac node,,,,UBERON:0038587,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,paracardiac lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0011122,obesity disorder,obesity disease|obesity,A disorder involving an excessive amount of body fat.,FALSE,,,,,,,,,,,,,,Obesity is a complex disease that may involve multiple environmental and genetic causes. See the subclass monogenic disease for genetic subtypes,,,,,,,,,,,,,,,,,,UMLS:C0028754|SCTID:414916001|Orphanet:521399|NCIT:C3283|MEDGEN:18127|ICD9:278.00|ICD9:278.0|HP:0001513|EFO:0001073|DOID:9970,,,,,,,,,,,,,,,,,,,,,,,,,obesity disease|obesity,,,,MONDO:0011122,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,obesity disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A disorder involving an excessive amount of body fat.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C15392,Thoracentesis,thoracentesis|Thoracic Paracentesis|Thoracentesis|THORACENTESIS|Puncture of Pleural Cavity for Aspiration|Pleurocentesis|Pleural Tap|Pleural Cavity Tap|Chest Aspiration,The removal of excess fluid via needle puncture from the thoracic cavity.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,thoracentesis|Thoracic Paracentesis|Thoracentesis|THORACENTESIS|Puncture of Pleural Cavity for Aspiration|Pleurocentesis|Pleural Tap|Pleural Cavity Tap|Chest Aspiration,,,,NCIT:C15392,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Thoracentesis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The removal of excess fluid via needle puncture from the thoracic cavity.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03450034,heating container by water bath,,Heating a container that is placed in another container filled with water kept near the boiling point.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=G0034,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03450034,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,heating container by water bath,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Heating a container that is placed in another container filled with water kept near the boiling point.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0010040,teaspoon,tsp|metric teaspoon,A metric teaspoon is a unit of measurement of volume widely used in cooking recipes and pharmaceutic prescriptions. It equals a 5mL volume.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,tsp|metric teaspoon,,,,UO:0010040,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,teaspoon,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A metric teaspoon is a unit of measurement of volume widely used in cooking recipes and pharmaceutic prescriptions. It equals a 5mL volume.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0010047,united states fda cup,us fda cup,A United States FDA cup is a unit of measurement of volume used by the US Federal Department of Agriculture as a nutritional serving measure. It equals a 240 mL volume.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,us fda cup,,,,UO:0010047,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,united states fda cup,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A United States FDA cup is a unit of measurement of volume used by the US Federal Department of Agriculture as a nutritional serving measure. It equals a 240 mL volume.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0010044,united states customary tablespoon,us customary tablespoon,A United States customary units tablespoon is a unit of measurement of volume widely used in cooking recipes and pharmaceutic prescriptions in America. It equals a 14.79 mL volume.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,us customary tablespoon,,,,UO:0010044,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,united states customary tablespoon,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A United States customary units tablespoon is a unit of measurement of volume widely used in cooking recipes and pharmaceutic prescriptions in America. It equals a 14.79 mL volume.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0010045,metric cup,C,A metric cup is a unit of measurement of volume widely used in cooking recipes and pharmaceutic prescriptions. It equals a 250mL volume.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,C,,,,UO:0010045,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,metric cup,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A metric cup is a unit of measurement of volume widely used in cooking recipes and pharmaceutic prescriptions. It equals a 250mL volume.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0010043,australian metric tablespoon,,An Australian metric tablespoon is a unit of measurement of volume used in Australia for cooking recipes and pharmaceutic prescriptions. It equals a 20mL volume.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:0010043,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,australian metric tablespoon,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An Australian metric tablespoon is a unit of measurement of volume used in Australia for cooking recipes and pharmaceutic prescriptions. It equals a 20mL volume.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0010042,tablespoon,tbsp|metric tablespoon,A metric tablespoon is a unit of measurement of volume widely used in cooking recipes and pharmaceutic prescriptions. It equals a 15mL volume.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,tbsp|metric tablespoon,,,,UO:0010042,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,tablespoon,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A metric tablespoon is a unit of measurement of volume widely used in cooking recipes and pharmaceutic prescriptions. It equals a 15mL volume.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0010041,united states customary teaspoon,us customary teaspoon,A United States customary units teaspoon is a unit of measurement of volume widely used in cooking recipes and pharmaceutic prescriptions in America. It equals a 4.93 mL volume.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,us customary teaspoon,,,,UO:0010041,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,united states customary teaspoon,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A United States customary units teaspoon is a unit of measurement of volume widely used in cooking recipes and pharmaceutic prescriptions in America. It equals a 4.93 mL volume.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0010046,united states customary cup,us customary cup,A United States customary units cup is a unit of measurement of volume widely used in cooking recipes and pharmaceutic prescriptions in America. It equals a 236.59 mL volume.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,us customary cup,,,,UO:0010046,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,united states customary cup,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A United States customary units cup is a unit of measurement of volume widely used in cooking recipes and pharmaceutic prescriptions in America. It equals a 236.59 mL volume.,,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000013,two dimensional cartesian coordinate system,,a 2 dimensional cartesian coordinate system is a cartesian coordinate system which defines 2 orthogonal one dimensional axes and which may be used to describe a 2 dimensional spatial region.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000013,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,two dimensional cartesian coordinate system,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra|Orlaith Burke|Alejandra Gonzalez-Beltran,,,,a 2 dimensional cartesian coordinate system is a cartesian coordinate system which defines 2 orthogonal one dimensional axes and which may be used to describe a 2 dimensional spatial region.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00003287,"populated place, Denmark",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00003287,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Denmark",http://purl.obolibrary.org/obo/GAZ_00005852,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0001167,age measurement datum,,A time measurement datum that is the result of measurement of age of an organism,FALSE,,,,,,,,,,,,,,,,,,,,"discussed on Nov 15, dev call
All subtype will be defined by textual definition now.|In MageTab file, we use
initialTimePoint (a process) + age (a number expected) + TimeUnit (definied in UO, such as year, hour, day, etc.)
Now we use the term label indicating the start time point of measuring the age, (number + TimeUnit) are expected instances of the class",MO_178 Age,,,,"note that we are currently defining subtypes of age measurement datum that specify when the age is relative to, e.g. planting, as we don't have adequate temporal predicates yet.
life of bearer doesn't imply organism
this assay measures time not developmental stage. we recognize that development can take different time periods under different conditions such as media / temperature
age as a quality is dubious; we plan to revisit
stages in development are currently handled with controlled vocabulary, such as 2-somite stage.",age measurement datum,,,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0001167,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,age measurement datum,,,,,,,,,,,,,,,,,,,,,,,,,,,,"PERSON: Alan Ruttenberg, Chris Stoeckert, Jie Zheng",,,,A time measurement datum that is the result of measurement of age of an organism,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001217,treated water - warm/hot,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001217,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,treated water - warm/hot,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0000648,clustered data set,,A data set that is produced as the output of a class discovery data transformation and consists of a data set with assigned discovered class labels.,FALSE,,,,,,,data set with assigned discovered class labels,,,,,,,,,,,,,,,,,,,clustered data set,,,,,http://purl.obolibrary.org/obo/IAO_0000125,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0000648,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,clustered data set,,,,,,,,,,,,,,,,,,,,,,,,,,,,PERSON: Monnie McGee|PERSON: James Malone,,,,A data set that is produced as the output of a class discovery data transformation and consists of a data set with assigned discovered class labels.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000323,pork shoulder (boneless),,A boneless pork shoulder.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000323,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pork shoulder (boneless),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A boneless pork shoulder.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_18,urinary system disease,,"A disease of anatomical entity that is located_in kidney, ureter, bladder and urethra.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:18,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,urinary system disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A disease of anatomical entity that is located_in kidney, ureter, bladder and urethra.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_4379,nut allergy,,"A food allergy that develops_from exposure to and particularly consumption of nuts, and has_symptom asthma, skin rashes, throat and eye irritation, and anaphylaxis.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:4379,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,nut allergy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A food allergy that develops_from exposure to and particularly consumption of nuts, and has_symptom asthma, skin rashes, throat and eye irritation, and anaphylaxis.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0001153,caecum,ceca|caeca,"A pouch in the digestive tract that connects the ileum with the ascending colon of the large intestine. It is separated from the ileum by the ileocecal valve, and is the beginning of the large intestine. It is also separated from the colon by the cecocolic junction.",FALSE,,,,,,,,,,,,,,"Taxon notes: in some herbivorous lizards, a cecum is present between small and large intestines[Kardong]",,,,,,,,,,,,,,,,,,galen:Cecum|Wikipedia:Cecum|VHOG:0001559|UMLS:C0007531|SCTID:181256004|NCIT:C12381|MIAA:0000288|MESH:D002432|MA:0000334|GAID:307|FMA:14541|EV:0100397|EMAPA:35197|EHDAA:3913|EHDAA2:0000206|EFO:0000850|CALOHA:TS-0122|BTO:0000166,,,,,,,,,,,,,,,,,,,,,,,,,intestinum crassum caecum|cecum|caecum,ceca|caeca,,,UBERON:0001153,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,caecum,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A pouch in the digestive tract that connects the ileum with the ascending colon of the large intestine. It is separated from the ileum by the ileocecal valve, and is the beginning of the large intestine. It is also separated from the colon by the cecocolic junction.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0001159,sigmoid colon,,"The part of the large intestine that is closest to the rectum and anus. It forms a loop that averages about 40 cm. in length, and normally lies within the pelvis, but on account of its freedom of movement it is liable to be displaced into the abdominal cavity.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:SigmoidColon|Wikipedia:Sigmoid_colon|UMLS:C0682612|UMLS:C0227391|SCTID:362166007|NCIT:C33550|NCIT:C12384|MIAA:0000314|MESH:D012809|MAT:0000314|FMA:14548|EMAPA:36391|EFO:0000846|CALOHA:TS-2044|BTO:0000645,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0001159,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,sigmoid colon,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The part of the large intestine that is closest to the rectum and anus. It forms a loop that averages about 40 cm. in length, and normally lies within the pelvis, but on account of its freedom of movement it is liable to be displaced into the abdominal cavity.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0001157,transverse colon,colon transversum,"The proximal-distal subdivision of colon that runs transversely across the upper part of the abdomen, from the right to the left colic flexure. Continuous with the descending colon[BTO,modified].",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:TransverseColon|Wikipedia:Transverse_colon|UMLS:C0227386|SCTID:362163004|NCIT:C12385|MIAA:0000312|MESH:D044684|MAT:0000312|MA:0001543|FMA:14546|EMAPA:35880|EFO:0000844|CALOHA:TS-2052|BTO:0000272,,,,,,,,,,,,,,,,,,,,,,,,,colon transversum,,,,UBERON:0001157,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,transverse colon,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The proximal-distal subdivision of colon that runs transversely across the upper part of the abdomen, from the right to the left colic flexure. Continuous with the descending colon[BTO,modified].",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0001156,ascending colon,colon ascendens,"Section of colon which is distal to the cecum and proximal to the transversecolon.[FMA,modified].",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:AscendingColon|Wikipedia:Ascending_colon|UMLS:C0227375|SCTID:362162009|NCIT:C12265|MIAA:0000311|MESH:D044682|MAT:0000311|MA:0001541|FMA:14545|EMAPA:35151|EFO:0000843|CALOHA:TS-0057|BTO:0000270,,,,,,,,,,,,,,,,,,,,,,,,,colon ascendens,,,,UBERON:0001156,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,ascending colon,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Section of colon which is distal to the cecum and proximal to the transversecolon.[FMA,modified].",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0001155,colon,posterior intestine,"A portion of the large intestine before it becomes the rectum. In mammals, the colon is the most part of the large intestine, excluding the vermiform appendix, the rectum and the anal canal.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:Colon|ZFA:0000706|XAO:0000243|Wikipedia:Colon_(anatomy)|VHOG:0000648|UMLS:C0009368|TAO:0000706|SCTID:302508007|NCIT:C12382|MESH:D003106|MAT:0000526|MAP:0000001|MA:0000335|GAID:309|FMA:14543|EV:0100079|EMAPA:18939|EFO:0000361|CALOHA:TS-0158|BTO:0000269|AAO:0010400,,,,,,,,,,,,,,,,,,,,,,,,,large bowel,posterior intestine,,,UBERON:0001155,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,colon,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A portion of the large intestine before it becomes the rectum. In mammals, the colon is the most part of the large intestine, excluding the vermiform appendix, the rectum and the anal canal.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0001158,descending colon,colon descendens,The portion of the colon between the left colic flexure and the sigmoid colon at the pelvic brim; the portion of the descending colon lying in the left iliac fossa is sometimes called the iliac colon.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:DescendingColon|Wikipedia:Descending_colon|UMLS:C0227389|SCTID:362165006|NCIT:C12268|MIAA:0000313|MESH:D044683|MAT:0000313|MA:0001542|FMA:14547|EMAPA:35285|EFO:0000845|CALOHA:TS-2010|BTO:0000641,,,,,,,,,,,,,,,,,,,,,,,,,colon descendens,,,,UBERON:0001158,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,descending colon,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The portion of the colon between the left colic flexure and the sigmoid colon at the pelvic brim; the portion of the descending colon lying in the left iliac fossa is sometimes called the iliac colon.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100747,dry matter composition tag,dry matter composition data type,A matter composition characterization data tag which indicates the presence of data that describes dry matter composition.,FALSE,,,,,,,dry matter composition,,,,,,,Example Guidance: Use this tag to indicate additional data is available that provides the composition of the mass of something when water is completely removed.,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,dry matter composition data type,,,,GENEPIO:0100747,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-05-18T19:08:34.869Z,,,,,,,,,,,,,,,,,,,dry matter composition tag,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A matter composition characterization data tag which indicates the presence of data that describes dry matter composition.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510194,probiotic claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0194,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510194,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,probiotic claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_2452,thrombophilia,,A blood coagulation disease that is characterized by an increased tendency to form clots.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:2452,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,thrombophilia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A blood coagulation disease that is characterized by an increased tendency to form clots.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100135,Ion Torrent sequencing instrument model,,A DNA sequencer manufactured by the Ion Torrent corporation.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100135,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,Ion Torrent sequencing instrument model,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A DNA sequencer manufactured by the Ion Torrent corporation.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03450013,cooking in water or water-based liquid,,A process of cooking by moist heat which is effected by hot water or water-based liquid in a container.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=G0013,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03450013,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,cooking in water or water-based liquid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A process of cooking by moist heat which is effected by hot water or water-based liquid in a container.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00003628,"populated place, The Netherlands",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00003628,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, The Netherlands",http://purl.obolibrary.org/obo/GAZ_00002946,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00003626,Province (The Netherlands),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00003626,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Province (The Netherlands),http://purl.obolibrary.org/obo/GAZ_00002946,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0005554,rheumatic disorder,rheumatologic disorder|rheumatic disease,"Inflammatory and degenerative diseases of connective tissue structures, such as arthritis.",FALSE,,,,,,,,,,,,,,"This is an umbrella term encompassing conditions causing chronic, often intermittent pain affecting the joints and/or connective tissue",,,,,,,,,,,,,,,,,,Wikipedia:Rheumatism|UMLS:C0009326|SCTID:396332003|NCIT:C27204|NANDO:2100152|NANDO:2100151|MESH:D012216|MEDGEN:3157|ICD9:729.0|EFO:0005755|DOID:1575,,,,,,,,,,,,,,,,,,,,,,,,,rheumatologic disorder|rheumatic disease,,,,MONDO:0005554,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,rheumatic disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Inflammatory and degenerative diseases of connective tissue structures, such as arthritis.",,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0008,Asian ancestry,Asian unspecified|Asian,"Includes individuals that either self-report or have been described as Asian but there was not sufficient information to allow classification as East Asian, Central Asian, South Asian or South-East Asian.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Asian unspecified|Asian,,,,HANCESTRO:0008,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Asian ancestry,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Includes individuals that either self-report or have been described as Asian but there was not sufficient information to allow classification as East Asian, Central Asian, South Asian or South-East Asian.",,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0009,East Asian ancestry,East Asian,"Includes individuals who either self-report or have been described by authors as East Asian or one of the sub-populations from this region (e.g Chinese). This category also includes individuals who genetically cluster with reference populations from this region, for example 1000 Genomes and/or HapMap CDX, CHB, CHS and JPT populations.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,East Asian,,,,HANCESTRO:0009,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,East Asian ancestry,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Includes individuals who either self-report or have been described by authors as East Asian or one of the sub-populations from this region (e.g Chinese). This category also includes individuals who genetically cluster with reference populations from this region, for example 1000 Genomes and/or HapMap CDX, CHB, CHS and JPT populations.",,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0005,European ancestry,white|European|Caucasian,"Includes individuals who either self-report or have been described by authors as
European, Caucasian, White or one of the sub-populations from this region (e.g Dutch). This category also includes individuals who genetically cluster with reference populations from this region, for example 1000 Genomes and/or HapMap CEU, FIN, GBR, IBS and TSI populations.",FALSE,,,,,,,,,,,,,,"It should be noted that the synonym ""Caucasian"", while widely used in some part of the world, has strong associations with notions of white supremancy and should be avoided whenever possible.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,white|European|Caucasian,,,,HANCESTRO:0005,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,European ancestry,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Includes individuals who either self-report or have been described by authors as
European, Caucasian, White or one of the sub-populations from this region (e.g Dutch). This category also includes individuals who genetically cluster with reference populations from this region, for example 1000 Genomes and/or HapMap CEU, FIN, GBR, IBS and TSI populations.",,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0006,South Asian ancestry,South Asian,"Includes individuals who either self-report or have been described by authors as South Asian or one of the sub-populations from this region (e.g Asian Indian). This category also includes individuals who genetically cluster with reference populations from this region, for example 1000 Genomes and/or HapMap
BEB, GIH, ITU, PJL and STU populations.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,South Asian,,,,HANCESTRO:0006,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,South Asian ancestry,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Includes individuals who either self-report or have been described by authors as South Asian or one of the sub-populations from this region (e.g Asian Indian). This category also includes individuals who genetically cluster with reference populations from this region, for example 1000 Genomes and/or HapMap
BEB, GIH, ITU, PJL and STU populations.",,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0007,South East Asian ancestry,Southeast Asian|South East Asian,"Includes individuals who either self-report or have been described by authors as South East Asian or one of the sub-populations from this region (e.g Vietnamese). This category also includes includes individuals who genetically cluster with reference populations from this region, for example 1000 Genomes KHV population. We note that East Asian and South East Asian populations are often conflated. However, recent studies indicate a unique genetic background for South East Asian populations.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Southeast Asian|South East Asian,,,,HANCESTRO:0007,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,South East Asian ancestry,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Includes individuals who either self-report or have been described by authors as South East Asian or one of the sub-populations from this region (e.g Vietnamese). This category also includes includes individuals who genetically cluster with reference populations from this region, for example 1000 Genomes KHV population. We note that East Asian and South East Asian populations are often conflated. However, recent studies indicate a unique genetic background for South East Asian populations.",,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0004,ancestry category,ancestral group,Population category defined using ancestry informative markers (AIMs) based on genetic/genomic data,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ancestral group,,,,HANCESTRO:0004,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,ancestry category,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Population category defined using ancestry informative markers (AIMs) based on genetic/genomic data,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100440,water depth,water_depth|water depth,A data field which describes the depth of some water.,FALSE,,,,,,,PCDS:water_depth,,,,,,,PCDS: Provide the numerical depth only of water only (without units).,,,,,,,,,,,,,,PCDS: 5,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,water_depth|water depth,water depth slot,,,,GENEPIO:0100440,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,water depth,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the depth of some water.,,PCDS: The depth of some water.,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490176,tin plate container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0176,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490176,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,tin plate container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_34994,teicoplanin A2,,Any of the glycopeptides whose structure consists of teicoplanin A<small><sub>3</sub></small>-1 in which the hydroxy group of the di(aryloxy)-substituted phenol moiety has been converted to the corresponding 2-acylamino-2-deoxy-β-<small>D</small>-glucoside. Members of the class differ only in the nature of the acyl group.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:34994,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,teicoplanin A2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any of the glycopeptides whose structure consists of teicoplanin A<small><sub>3</sub></small>-1 in which the hydroxy group of the di(aryloxy)-substituted phenol moiety has been converted to the corresponding 2-acylamino-2-deoxy-β-<small>D</small>-glucoside. Members of the class differ only in the nature of the acyl group.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C40975,Last Name,pi_last_name|pi last name|Surname|Person Surname|Person Family Name|Last Name|Family Name,A word or group of words indicating a person's last (family) name.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,pi_last_name|pi last name|Surname|Person Surname|Person Family Name|Last Name|Family Name,,,,NCIT:C40975,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Last Name,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A word or group of words indicating a person's last (family) name.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C49683,Children 2-11 Years Old,Children 2-11 Years Old|Children (2-11),An age group comprised of individuals between 2 to 11 years of age.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Children 2-11 Years Old|Children (2-11),,,,NCIT:C49683,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Children 2-11 Years Old,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An age group comprised of individuals between 2 to 11 years of age.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00005397,lamb loin saddle,,A cut of lamb that includes both loins (the tender meat along the backbone) and the backbone itself.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00005397,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lamb loin saddle,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A cut of lamb that includes both loins (the tender meat along the backbone) and the backbone itself.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_33598,carbocyclic compound,,A homocyclic compound in which all of the ring members are carbon atoms.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:33598,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,carbocyclic compound,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A homocyclic compound in which all of the ring members are carbon atoms.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002121,tube containing antimicrobial,,A tube that contains antimicrobials,FALSE,,,,,,,,,,,,,,NOTE: there are different types of tubes with coloured caps indicating different preservatives etc.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002121,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,tube containing antimicrobial,,,,,,,,,,,,,,,,,,,,,,,,,,,,Emma Griffiths,,,,A tube that contains antimicrobials,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C71384,Biological Relative,consanguinity|Natural Relative|Consanguinity|Consanguineous Relative|Blood Relative|Blood Relation|Biological Relative|BIOLOGICALLY RELATED,A person related by descent rather than by marriage or law.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,consanguinity|Natural Relative|Consanguinity|Consanguineous Relative|Blood Relative|Blood Relation|Biological Relative|BIOLOGICALLY RELATED,,,,NCIT:C71384,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Biological Relative,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A person related by descent rather than by marriage or law.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0025669,Abnormal neck physiology,,Any functional anomaly of the neck region.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0025669,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal neck physiology,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any functional anomaly of the neck region.,,,,,,,,
http://purl.obolibrary.org/obo/OMIT_0002803,Bacterial Toxins,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OMIT:0002803,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/omit.owl,,,,,,,,,Bacterial Toxins,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/OMIT_0002807,Bacteriological Techniques,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OMIT:0002807,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/omit.owl,,,,,,,,,Bacteriological Techniques,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/OMIT_0002802,Bacterial Proteins,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OMIT:0002802,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/omit.owl,,,,,,,,,Bacterial Proteins,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100272,spouse role,,"A role inhering in a person that is realized when the bearer is a significant other in a marriage, civil union, or common-law marriage.",FALSE,,,,,,,Spouse of case,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Spouse,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100272,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,spouse role,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A role inhering in a person that is realized when the bearer is a significant other in a marriage, civil union, or common-law marriage.",,,,,,,,
http://purl.obolibrary.org/obo/OBI_0000947,service provider role,,"is a role which inheres in a person or organization and is realized in in a planned process which provides access to training, materials or execution of protocols for an organization or person",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,service provider role,,"Jackson Lab provides experimental animals, EBI provides training on databases, a core facility provides access to a DNA sequencer.",,,http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0000947,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,service provider role,,,,,,,,,,,,,,,,,,,,,,,,,,,,PERSON:Helen Parkinson,,,,"is a role which inheres in a person or organization and is realized in in a planned process which provides access to training, materials or execution of protocols for an organization or person",,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0002075,spontaneous tension pneumothorax,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,icd11.foundation:304972724|UMLS:C0155907|SCTID:196102003|MEDGEN:510132|ICD9:512.0|ICD10CM:J93.0|DOID:1672,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MONDO:0002075,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,,,,,,,,,spontaneous tension pneumothorax,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_4156,primary syphilis,,"A syphilis that is the first stage of syphilis, marked by the development of a chancre, which is characterized by mononuclear leukocytic infiltration, macrophages, and lymphocytes.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:4156,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,primary syphilis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A syphilis that is the first stage of syphilis, marked by the development of a chancre, which is characterized by mononuclear leukocytic infiltration, macrophages, and lymphocytes.",,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00005151,"populated place, Greece",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00005151,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Greece",http://purl.obolibrary.org/obo/GAZ_00002945,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00005153,"populated place, Guatemala",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00005153,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Guatemala",http://purl.obolibrary.org/obo/GAZ_00002936,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0080784,urinary tract infection,,"An urinary system disease that is characterized by an infection in any part of the urinary system, including the kidneys, ureters, bladder or urethra.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0080784,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,urinary tract infection,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An urinary system disease that is characterized by an infection in any part of the urinary system, including the kidneys, ureters, bladder or urethra.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C34433,Bone Marrow Disorder,Bone Marrow Disorder|Bone Marrow Disease,A non-neoplastic or neoplastic disorder that affects the bone marrow.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Bone Marrow Disorder|Bone Marrow Disease,,,,NCIT:C34433,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Bone Marrow Disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A non-neoplastic or neoplastic disorder that affects the bone marrow.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C13717,Anatomic Site,Topographic Site|Topographic (Anatomic) Site|Site|Location|LOC|Anatomical_Location|Anatomical Location|Anatomic Sites|Anatomic Site|Anatomic Location,Named locations of or within the body.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Topographic Site|Topographic (Anatomic) Site|Site|Location|LOC|Anatomical_Location|Anatomical Location|Anatomic Sites|Anatomic Site|Anatomic Location,,,,NCIT:C13717,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Anatomic Site,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Named locations of or within the body.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001490,hospitalization history item,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001490,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,hospitalization history item,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000467,constructed barrier,barrier,"A constructed barrier is a freestanding wall, berm, or fence built to limit movement of entities across a boundary.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,barrier,,,,,ENVO:01000467,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,constructed barrier,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A constructed barrier is a freestanding wall, berm, or fence built to limit movement of entities across a boundary.",,,,,,,,
http://purl.obolibrary.org/obo/PATO_0000011,age,,A time quality inhering in a bearer by virtue of how long the bearer has existed.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PATO:0000011,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/vo.owl,http://purl.oboInOwlInOwllibrary.org/oboInOwlInOwl/pato#scalar_slim|http://purl.oboInOwlInOwllibrary.org/oboInOwlInOwl/pato#attribute_slim,,,,,,,,age,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A time quality inhering in a bearer by virtue of how long the bearer has existed.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000337,pork leg cap steak (raw),,A raw pork leg cap steak.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000337,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pork leg cap steak (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw pork leg cap steak.,,,,,,,,
http://purl.obolibrary.org/obo/IDO_0000414,infectious agent host role,,A pathogen host role borne by an organism in virtue of the fact that its extended organism contains an infectious agent.,FALSE,,,,,,,,,,,,,,"By this definition, vectors and other organisms that may not be infected are bearers of the infectious agent host role.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,IDO:0000414,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ido.owl,,,,,,,,,infectious agent host role,,,,,,,,,,,,,,,,,,,,,,,,,,,,Lindsay Cowell|Alexander Diehl|Albert Goldfain,,,,A pathogen host role borne by an organism in virtue of the fact that its extended organism contains an infectious agent.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_33406,organoarsenic compound,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:33406,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,organoarsenic compound,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100355,seasonal worker role,,A role inhering in a person that is realized when the bearer is an employee that performs labor according to a seasonal schedule.,FALSE,,,,,,,Seasonal Worker,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100355,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,seasonal worker role,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A role inhering in a person that is realized when the bearer is an employee that performs labor according to a seasonal schedule.,,,,,,,,
http://purl.obolibrary.org/obo/IAO_0000416,time measurement datum,,A scalar measurement datum that is the result of measuring a temporal interval,FALSE,,,,,,,,,,,,,,Damion Dooley's note: See https://www.w3.org/TR/NOTE-datetime for ISO 8601 time standards,,,,,,,,,,,2009/09/28 Alan Ruttenberg. Fucoidan-use-case,,,,,,http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,IAO:0000416,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/iao.owl|http://purl.obolibrary.org/obo/apollo_sv.owl,,,,,,,,,time measurement datum,,,,,,,,,,,,,,,,,,,,,,,,,,,,Person:Alan Ruttenberg,,,,A scalar measurement datum that is the result of measuring a temporal interval,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000070,sequencing location,,A laboratory sequencing datum which describes the location the sequencing run was performed.,FALSE,,,,,,,,,,,,,,,,,,,,,GROUP: IRIDA Ontology (Emma),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000070,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,,,,,,,sequencing location,,,,,Sequencing,,,,,,,,,,,,,,,,,,,,,,Sequencing Location,,,inferred from BCCDC interviews,,A laboratory sequencing datum which describes the location the sequencing run was performed.,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0005265,inflammatory bowel disease,inflammatory bowel disease|autoimmune bowel disorder|IBD,"A spectrum of small and large bowel inflammatory diseases of unknown etiology. It includes Crohn's disease, ulcerative colitis, and colitis of indeterminate type.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0021390|SCTID:24526004|OMIMPS:266600|NCIT:C3138|NANDO:2100259|MESH:D015212|MEDGEN:43877|ICD9:558.9|EFO:0003767|DOID:0050589,,,,,,,,,,,,,,,,,,,,,,,,,inflammatory bowel disease|autoimmune bowel disorder|IBD,,,,MONDO:0005265,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,inflammatory bowel disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A spectrum of small and large bowel inflammatory diseases of unknown etiology. It includes Crohn's disease, ulcerative colitis, and colitis of indeterminate type.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000157,beef culotte steak,,A beef steak cut from the triangle-shaped muscle that caps or covers the top sirloin.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000157,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef culotte steak,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A beef steak cut from the triangle-shaped muscle that caps or covers the top sirloin.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_3371,capreomycin,,,FALSE,,,,,,,Cm|CAP,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:3371,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,capreomycin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_7426,cutaneous anthrax,,"An anthrax disease that results_in infection located_in skin, has_material_basis_in Bacillus anthracis, which is transmitted_by contact with infected animals or animal products. The infection has_symptom skin lesion that eventually forms an ulcer with a black center.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:7426,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,cutaneous anthrax,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An anthrax disease that results_in infection located_in skin, has_material_basis_in Bacillus anthracis, which is transmitted_by contact with infected animals or animal products. The infection has_symptom skin lesion that eventually forms an ulcer with a black center.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C211,Therapeutic Corticosteroid,corticosteroid|Therapeutic Corticosteroid|Corticosteroids,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,corticosteroid|Therapeutic Corticosteroid|Corticosteroids,,,,NCIT:C211,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Therapeutic Corticosteroid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000968,water intake,,"A hydraulic-engineering installation which transports water - in specified amounts, of a specified quality, and in accordance with a water-consumption plan - from a source of supply into a conduit.",FALSE,,,,,,,,,,,,,,"Sources of water include rivers, lakes, reservoirs, and other water bodies. Conduits include canals, pipelines, and tunnels. Water intakes typically transport water for purposes of hydroelectric power engineering, water supply, or irrigation.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01000968,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,water intake,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A hydraulic-engineering installation which transports water - in specified amounts, of a specified quality, and in accordance with a water-consumption plan - from a source of supply into a conduit.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0011698,midgut loop,,Portion of midgut after it bends around the superior mesenteric artery.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,VHOG:0000673|UMLS:C1513298|NCIT:C34211|EMAPA:17036,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0011698,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,midgut loop,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Portion of midgut after it bends around the superior mesenteric artery.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0050383,typhoidal tularemia,,"A tularemia that results_in bacteremia and has_symptom fever, has_symptom chills, has_symptom myalgia, has_symptom malaise, and has_symptom weight loss.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0050383,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,typhoidal tularemia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A tularemia that results_in bacteremia and has_symptom fever, has_symptom chills, has_symptom myalgia, has_symptom malaise, and has_symptom weight loss.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_0050382,glandular tularemia,,A tularemia that results_in swelling of regional lymph glands.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0050382,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,glandular tularemia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A tularemia that results_in swelling of regional lymph glands.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_2297,leptospirosis,,"A primary bacterial infectious disease that involves systemic infection, has_material_basis_in Leptospira, which is transmitted by contact with water, food, or soil containing urine from the infected animals. The infection has symptom jaundice, has symptom chills, has symptom fever, has symptom muscle pain, and has symptom hepatomegaly.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:2297,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,leptospirosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A primary bacterial infectious disease that involves systemic infection, has_material_basis_in Leptospira, which is transmitted by contact with water, food, or soil containing urine from the infected animals. The infection has symptom jaundice, has symptom chills, has symptom fever, has symptom muscle pain, and has symptom hepatomegaly.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00005401,lamb chump,,"A cut taken from the hindquarter of the lamb, located near the hip and tail.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00005401,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lamb chump,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A cut taken from the hindquarter of the lamb, located near the hip and tail.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00005400,lamb loin roast (raw),,A raw lamb loin roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00005400,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lamb loin roast (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw lamb loin roast.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100935,ambient temperature measurement value,ambient temperature measurement unit,An environmental data field which describes the numerical value for a measurement of the ambient temperature.,FALSE,,,,,,,PCDS:ambient_temperature_measurement_value,,,,,,,PCDS: Provide the numerical value of the measured temperature.,,,,,,,,,,,,,,PCDS: 70,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,ambient temperature measurement unit,ambient temperature measurement unit slot,,,,GENEPIO:0100935,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,ambient temperature measurement value,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the numerical value for a measurement of the ambient temperature.,,PCDS: The numerical value of a measurement of the ambient temperature.,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510214,food allergen labelling about cereals containing gluten and products thereof,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0214,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510214,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food allergen labelling about cereals containing gluten and products thereof,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C53268,Recipient,recipient|Recipient,A person who gets something.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,recipient|Recipient,,,,NCIT:C53268,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Recipient,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A person who gets something.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0001969,blood plasma,portion of plasma|plasma,"The liquid component of blood, in which erythrocytes are suspended.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Blood_plasma|UMLS:C0032105|NCIT:C13356|MIAA:0000052|MESH:D010949|MAT:0000052|MA:0002501|GAID:1178|FMA:62970|EMAPA:35690|EFO:0001905|CALOHA:TS-0800|BTO:0000131,,,,,,,,,,,,,,,,,,,,,,,,portion of plasma|plasma,portion of blood plasma|blood plasm,,,,UBERON:0001969,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,blood plasma,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The liquid component of blood, in which erythrocytes are suspended.",,,,,,,,
https://w3id.org/linkml/SchemaDefinition,SchemaDefinition,,"A collection of subset, type, slot and class definitions.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,linkml:SchemaDefinition,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A collection of subset, type, slot and class definitions.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000127,beef strip steak (boneless),,A cut that comes from the top loin or strip loin into uniform steak.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000127,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef strip steak (boneless),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A cut that comes from the top loin or strip loin into uniform steak.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000348,veal top round,,A cut that comes from the inside of the rear leg of a calf.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000348,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,veal top round,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A cut that comes from the inside of the rear leg of a calf.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001000,draft ReSeq Tuberculosis data platform standard,,"The Relational Sequencing TB Data Platform (ReSeqTB) catalogs a vast amount of genotypic, phenotypic and related metadata from Mycobacterium tuberculosis (Mtb) strains to enable the development of clinically useful, WHO-endorsed in vitro diagnostic assays for rapid drug susceptibility testing of Mtb.",FALSE,,,,,,,,,,,,,,,,,,,,,https://platform.reseqtb.org/,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001000,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,draft ReSeq Tuberculosis data platform standard,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"The Relational Sequencing TB Data Platform (ReSeqTB) catalogs a vast amount of genotypic, phenotypic and related metadata from Mycobacterium tuberculosis (Mtb) strains to enable the development of clinically useful, WHO-endorsed in vitro diagnostic assays for rapid drug susceptibility testing of Mtb.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C216187,Adolescent and Young Adult,Adolescent and Young Adult|AYA,An age group comprising individuals from 15-39 years old.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Adolescent and Young Adult|AYA,,,,NCIT:C216187,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Adolescent and Young Adult,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An age group comprising individuals from 15-39 years old.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0100051,specimen,sample,A material entity that is collected for potential use as an input upon which measurements or observations are performed.,FALSE,,,,,,,,,,,,,,,,,,,,,GROUP: OBI Biomaterial Branch,,,http://purl.obolibrary.org/obo/GENEPIO_0000134,,specimen,,Biobanking of blood taken and stored in a freezer for potential future investigations stores specimen; collecting a stone from a site.,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,sample,,,,OBI:0100051,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,specimen,,,,,,,,,,,,,,,,,,,,,,,,,,,,PERSON: Philippe Rocca-Serra|PERSON: James Malone,,,https://github.com/obi-ontology/obi/issues/1013,A material entity that is collected for potential use as an input upon which measurements or observations are performed.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000448,bison top round (raw),,A raw bison top round cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000448,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,bison top round (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw bison top round cut.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102052,assay target name,assay target name 3|assay target name 2|assay target name 1|GENEPIO:0102039|GENEPIO:0102038,"PCDS: The specific genomic region, sequence, or variant targeted by the assay in a diagnostic test. This may include parts of a gene, non-coding regions, or other genetic elements that serve as a marker for detecting the presence of a pathogen or other relevant entities.",FALSE,,,,,,,PCDS:assay_target_name_*,,,,,,,"PCDS: The specific genomic region, sequence, or variant targeted by the assay in a diagnostic test. This may include parts of a gene, non-coding regions, or other genetic elements that serve as a marker for detecting the presence of a pathogen or other relevant entities.",,,,,,,,,,,,,,PCDS: MeV-F,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,assay target name 3|assay target name 2|assay target name 1|GENEPIO:0102039|GENEPIO:0102038,,,,GENEPIO:0102052,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2026-04-13T17:18:02.461Z,,,,,,,,,,,,,,,,,,,assay target name,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PCDS: The name of the assay target used in the diagnostic RT-PCR test.,,,,,,
http://purl.obolibrary.org/obo/OBA_2040166,age of onset of depressive disorder,age depressive disorder symptoms begin|age at onset of depressive disorder,The age at which depressive disorder manifestations first appear.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,age depressive disorder symptoms begin|age at onset of depressive disorder,,,,OBA:2040166,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age of onset of depressive disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The age at which depressive disorder manifestations first appear.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_10400,gonococcal seminal vesiculitis,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:10400,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,gonococcal seminal vesiculitis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001068,religious missionairy activity,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001068,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,religious missionairy activity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C41075,Implant,implant|Implanted|Implantable|Implant,A prosthesis placed permanently in tissue.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,implant|Implanted|Implantable|Implant,,,,NCIT:C41075,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Implant,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A prosthesis placed permanently in tissue.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000164,beef tri-tip roast (raw),,A raw beef tri-tip roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000164,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef tri-tip roast (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef tri-tip roast.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510030,pet bird as consumer,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0030,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510030,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pet bird as consumer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_149385,Salmonella enterica subsp. enterica serovar Hadar,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,Salmonella enterica subsp. enterica serovar Hadar,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:149385,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Salmonella enterica subsp. enterica serovar Hadar,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102151,MGI DNBSEQ-T20x2,,An MGI DNBSEQ instrument model which utilizes integrated robotics and whole-wafer-sized slides to process six slides per run and producing paired end reads between 100-150bp.,FALSE,,,,,,,DNBSEQ-T20x2,,,,,,,,,,,,,,https://www.completegenomics.com/products/sequencing-platforms/dnbseq-t20x2/|https://en.mgi-tech.com/products/instruments_info/33/,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102151,,,,,,,,,,,,,https://orcid.org/0000-0002-7654-6902|https://orcid.org/0000-0001-8008-8249,2025-03-21T01:14:47.111Z,,,,,,,,,,,,,,,,,,,MGI DNBSEQ-T20x2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An MGI DNBSEQ instrument model which utilizes integrated robotics and whole-wafer-sized slides to process six slides per run and producing paired end reads between 100-150bp.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490401,polyethylene (low density) - polyester container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0401,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490401,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,polyethylene (low density) - polyester container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_179238,Mus musculus homourus,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,Mus musculus homourus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:179238,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Mus musculus homourus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_36358,polyatomic ion,,An ion consisting of more than one atom.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:36358,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,polyatomic ion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An ion consisting of more than one atom.,,,,,,,,
http://purl.obolibrary.org/obo/APOLLO_SV_00000153,population census,,A census that is the outcome of a population survey.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,APOLLO_SV:00000153,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/apollo_sv.owl,,,http://purl.obolibrary.org/obo/OBI_0000181|http://purl.obolibrary.org/obo/GENEPIO_0001925,,,,,,population census,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A census that is the outcome of a population survey.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100791,carbonaceous biochemical oxygen demand measurement,carbonaceous biochemical oxygen demand (CBOD) measurement value,An environmental data field which describes the numerical value of a measurement of carbonaceous biochemical oxygen demand (CBOD).,FALSE,,,,,,,PCDS:carbonaceous_biochemical_oxygen_demand_cbod_measurement_value,,,,,,,PCDS: Provide the numerical value of the measured CBOD.,,,,,,,,,,,,,,PCDS: 20,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,carbonaceous biochemical oxygen demand (CBOD) measurement value,carbonaceous biochemical oxygen demand (CBOD) measurement value slot,,,,GENEPIO:0100791,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-21T01:14:47.111Z,,,,,,,,,,,,,,,,,,,carbonaceous biochemical oxygen demand measurement,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the numerical value of a measurement of carbonaceous biochemical oxygen demand (CBOD).,,PCDS: The numerical value of a measurement of carbonaceous biochemical oxygen demand (CBOD).,,,,,,
http://purl.obolibrary.org/obo/HP_0100547,Abnormal forebrain morphology,Abnormality of the forebrain|Abnormality of forebrain morphology|Abnormal shape of forebrain,"An abnormality of the forebrain, which has as its parts the telencephalon, diencephalon, lateral ventricles and third ventricle.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4020967,,,,,,,,,,,,,,,,,,,,,,,,,Abnormality of the forebrain|Abnormality of forebrain morphology|Abnormal shape of forebrain,,,,HP:0100547,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal forebrain morphology,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An abnormality of the forebrain, which has as its parts the telencephalon, diencephalon, lateral ventricles and third ventricle.",,,,,,,,
http://purl.obolibrary.org/obo/HP_0100543,Cognitive impairment,Intellectual impairment|Cognitive impairment|Cognitive deficits|Cognitive defects|Cognitive abnormality|Abnormality of cognition,"Abnormal cognition is characterized by deficits in thinking, reasoning, or remembering.",FALSE,,,,,,,,,,,,,,"An individual with cognitive impairment may experience difficulties in remembering, learning new things, concentrating, or making decisions.",,,,,,,,,,,,,,,,,,UMLS:C0683322|UMLS:C0338656|SNOMEDCT_US:386806002,,,,,,,,,,,,,,,,,,,,,,,HP:0007211|HP:0006998|HP:0006972|HP:0002441|HP:0002337|HP:0002302|HP:0002129|HP:0002128,,Intellectual impairment|Cognitive impairment|Cognitive deficits|Cognitive defects|Cognitive abnormality|Abnormality of cognition,,,,HP:0100543,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Cognitive impairment,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Abnormal cognition is characterized by deficits in thinking, reasoning, or remembering.",,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000592,Rand index,,"the Rand index is a ratio, related to the notion of accuracy (STATO_0000415), which is used to compare the similarity of two clustering outcomes.",FALSE,,,,,,,RI,,,,,,,,,,,,,,"Rand, W.M. 1971. Objective criteria for the evaluation of clustering methods. Journal of the American Statistical Association 66: 846--850. Hubert, L. and Arabie, P. 1985. Comparing partitions. Journal of Classification. 2: 193--218.",,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000592,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,Rand index,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra,,,,"the Rand index is a ratio, related to the notion of accuracy (STATO_0000415), which is used to compare the similarity of two clustering outcomes.",,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000024,three dimensional cartesian coordinate system,,a three dimensional cartesian coordinate system is a cartesian coordinate system which defines 3 orthogonal one dimensional axes and which may be used to describe a 3 dimensional spatial region.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000024,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,three dimensional cartesian coordinate system,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra|Orlaith Burke|Alejandra Gonzalez-Beltran,,,,a three dimensional cartesian coordinate system is a cartesian coordinate system which defines 3 orthogonal one dimensional axes and which may be used to describe a 3 dimensional spatial region.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001574,medical knowledge relevance,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001574,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,medical knowledge relevance,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GO_0035176,social behavior,social behaviour,"Behavior directed towards society, or taking place between members of the same species. Occurs predominantly, or only, in individuals that are part of a group.",FALSE,,,,,,,,,,,,,,Behavior such as predation which involves members of different species is not social. Communication between members of different species is also not social behavior.,,,,,,,,,,,,,,,,,,Wikipedia:Social_behavior,,,,,,,,,,,,,,,,,,,,,,,,,social behaviour,,,,GO:0035176,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/pco.owl,,,,,,,,,social behavior,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Behavior directed towards society, or taking place between members of the same species. Occurs predominantly, or only, in individuals that are part of a group.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100836,read mapping criteria,read mapping criteria,A data field which describes the criteria used to map reads to a reference sequence.,FALSE,,,,,,,PCDS:read_mapping_criteria,,,,,,,PCDS: Provide a description of the read mapping criteria.,,,,,,,,,,,,,,PCDS: Phred score >20,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,read mapping criteria,read mapping criteria slot,,,,GENEPIO:0100836,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,read mapping criteria,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the criteria used to map reads to a reference sequence.,,PCDS: A description of the criteria used to map reads to a reference sequence.,,,,,,
http://purl.obolibrary.org/obo/NCIT_C191421,Cardiovascular Mortality During Acute COVID-19,Cardiovascular Mortality During Acute SARS-CoV-2 Infection|Cardiovascular Mortality During Acute COVID-19,Death attributable to heart disease during acute SARS-CoV-2 infection.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Cardiovascular Mortality During Acute SARS-CoV-2 Infection|Cardiovascular Mortality During Acute COVID-19,,,,NCIT:C191421,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Cardiovascular Mortality During Acute COVID-19,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Death attributable to heart disease during acute SARS-CoV-2 infection.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_10784,Queensland tick typhus,,"A spotted fever that has_material_basis_in Rickettsia australis, which is transmitted_by ticks (Ixodes holocyclus). The infection has_symptom fever, has_symptom headache, has_symptom myalgia, has_symptom maculopapular rash, and has_symptom lymphadenopathy.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:10784,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,Queensland tick typhus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A spotted fever that has_material_basis_in Rickettsia australis, which is transmitted_by ticks (Ixodes holocyclus). The infection has_symptom fever, has_symptom headache, has_symptom myalgia, has_symptom maculopapular rash, and has_symptom lymphadenopathy.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100858,midnight-bccdc-v1 strategy,,"An amplicon strategy which is for SARS-CoV-2 and based on the original Midnight scheme developed by Oxford Nanopore Technologies, and adapted by the BCCDC Public Health Lab with the attributes of version 1.0.0 which produces amplicons approximately 1200bp in length.",FALSE,,,,,,,midnight-bccdc-v1|midnight bccdc v1,,,,,,,,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100858,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2026-04-13T19:52:38.515Z,,,,,,,,,,,,,,,,,,,midnight-bccdc-v1 strategy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An amplicon strategy which is for SARS-CoV-2 and based on the original Midnight scheme developed by Oxford Nanopore Technologies, and adapted by the BCCDC Public Health Lab with the attributes of version 1.0.0 which produces amplicons approximately 1200bp in length.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020276,"piece of chicken breast (skinless, raw)",,A raw piece of skinless chicken breast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020276,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"piece of chicken breast (skinless, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw piece of skinless chicken breast.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001078,homeless status,,"",FALSE,,,,,,,,,,,,,,,,,,,,,"",,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001078,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,homeless status,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"",,,,,,,,
http://purl.obolibrary.org/obo/DOID_1962,fallopian tube disease,,A female reproductive system disease that is located_in the fallopian tube.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:1962,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,fallopian tube disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A female reproductive system disease that is located_in the fallopian tube.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03420194,egg or egg component,,"Poultry, game bird or turtle eggs.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=C0194,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03420194,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,egg or egg component,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Poultry, game bird or turtle eggs.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_38329,oxazolidines,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:38329,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,oxazolidines,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00002734,"populated place, Bahamas",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00002734,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Bahamas",http://purl.obolibrary.org/obo/GAZ_00002733,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03460327,food surface bacterial curing,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=H0327,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03460327,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food surface bacterial curing,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490431,polyolefin container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0431,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490431,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,polyolefin container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0021674,post-viral disorder,sequela of viral disease,A post-infectious disorder that follows viral infection but is distinct from the viral infection itself and its usual manifestations.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C1264605|SCTID:123948009|MEDGEN:688821|ICD9:139.8,,,,,,,,,,,,,,,,,,,,,,,,,sequela of viral disease,,,,MONDO:0021674,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,,,,,,,,,post-viral disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A post-infectious disorder that follows viral infection but is distinct from the viral infection itself and its usual manifestations.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C18908,Older Population,Older Populations|Older Population,"The population of retired people, generally over 62",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Older Populations|Older Population,,,,NCIT:C18908,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Older Population,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The population of retired people, generally over 62",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0101110,virus identifier,,,FALSE,,,,,,,PCDS:virus_identifier,,,,,,,,,,,,,,,,,,,,,,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0101110,,,,,,,,,,,,,,2026-04-09T18:02:29.914Z,,,,,,,,,,,,,,,,,,,virus identifier,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C16205,Healthcare Activity,Healthcare Activity|Healthcare|Health Care Activity|Health Care,"The actions of prevention, treatment, and management of illness and the preservation of mental and physical well-being through the services offered by the medical and allied health professions.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Healthcare Activity|Healthcare|Health Care Activity|Health Care,,,,NCIT:C16205,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Healthcare Activity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The actions of prevention, treatment, and management of illness and the preservation of mental and physical well-being through the services offered by the medical and allied health professions.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_33860,aromatic amine,,An amino compound in which the amino group is linked directly to an aromatic system.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:2863|CHEBI:2834|CHEBI:22646|CHEBI:22622|CHEBI:13827,,,,,,CHEBI:33860,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,aromatic amine,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An amino compound in which the amino group is linked directly to an aromatic system.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02021415,piece of deer (raw),,A raw piece of deer.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02021415,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of deer (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw piece of deer.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002129,draft Enterobase contextual data standard,,This is a draft (under development) collection of fields for capturing the contextual data for Enterobase (https://enterobase.warwick.ac.uk/) records.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002129,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,draft Enterobase contextual data standard,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,This is a draft (under development) collection of fields for capturing the contextual data for Enterobase (https://enterobase.warwick.ac.uk/) records.,,,"order:
GENEPIO:0001640 # taxonomy
GENEPIO:0002086 # geographic location
GENEPIO:0002076 # geographic feature
GENEPIO:0002106 # food
FOODON:03510136 # food consumer
GENEPIO:0002094 # specimen collection device
GENEPIO:0000025 # anatomical site
GENEPIO:0000028 # body product
GENEPIO:0001724 # host organism common name
GENEPIO:0001567 # host taxonomy
UBERON:0000105 # life cycle
GENEPIO:0001639 # antigenic formula
GENEPIO:0001718 # serotype specification
GENEPIO:0000045 # PFGE test specification",,,,,
http://purl.obolibrary.org/obo/HP_0025015,Abnormal vascular morphology,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0025015,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal vascular morphology,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490367,polyethylene container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0367,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490367,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,polyethylene container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00002147,food material by consumer group,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00002147,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food material by consumer group,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100730,total fecal coliform count microbiological quantification tag,total fecal coliform count data type,A colony count microbiological quantification data tag that indicates the presence of data which describes total colony count of fecal coliforms.,FALSE,,,,,,,total fecal coliform count,,,,,,,Example Guidance: Use this tag to indicate additional data is available that provides quantification information from microbial total colony count of coliforms that generally originate in the intestines of warm-blooded animals.,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,total fecal coliform count data type,,,,GENEPIO:0100730,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-05-18T19:08:34.869Z,,,,,,,,,,,,,,,,,,,total fecal coliform count microbiological quantification tag,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A colony count microbiological quantification data tag that indicates the presence of data which describes total colony count of fecal coliforms.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001572,project relevance,,"Indicates how the knowledge derived from the project can be applied, and to what field(s).",FALSE,,,,,,,,,,,,,,,,,,,,,https://www.niaid.nih.gov/research/dmid-metadata-standards-core-project,,,,Damion Dooley's note: NAIAD GRCID-BRC has Project Relevance map to OBO Foundry   Study Design (http://purl.obolibrary.org/obo/OBI_0500000) but this is a bit of a stretch.,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001572,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,project relevance,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"Indicates how the knowledge derived from the project can be applied, and to what field(s).",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000138,contact specification - lab test requester,,A lab test requestor is the individual or agency requesting that one or more tests be performed on a specimen.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000138,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,contact specification - lab test requester,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A lab test requestor is the individual or agency requesting that one or more tests be performed on a specimen.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_1205,allergic disease,,"An immune system disease that is an exaggerated immune response to allergens, such as insect venom, dust mites, pollen, pet dander, drugs or some foods.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:1205,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,allergic disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An immune system disease that is an exaggerated immune response to allergens, such as insect venom, dust mites, pollen, pet dander, drugs or some foods.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_33424,sulfur oxoacid derivative,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:33424,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,sulfur oxoacid derivative,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00005206,New Caledonia,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,INSDC:country:new caledonia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00005206,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,New Caledonia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001827,Geonames,,The GeoNames geographical database covers all countries and contains over eleven million placenames that are available for download free of charge.,FALSE,,,,,,,,,,,,,,,,,,,,,http://www.geonames.org/,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001827,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Geonames,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,The GeoNames geographical database covers all countries and contains over eleven million placenames that are available for download free of charge.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510031,pet dog as consumer,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0031,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510031,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pet dog as consumer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490325,propyonate cellulose film,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0325,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490325,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,propyonate cellulose film,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100567,quality control not performed datum,,A data item which is a statement confirming that quality control processes have not been carried out.,FALSE,,,,,,,quality control not performed,,,,,,,"Example: Use this statement to indicate that quality control processes have not been performed. Note: quality control here refers to quality of the raw reads, consensus sequence or assembly, not the qaulity of analytical results e.g. lineage assignment.",,,,,,,,,,,,,,,,,ready for release,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100567,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-1107-9135,2023-01-23T00:42:19.315Z,,,,,,,,,,,,,,,,,,,quality control not performed datum,,,,,,,,,,,,,,,,,,,,,,The PHA4GE QC Contextual Data Tags Specification: https://github.com/pha4ge/contextual-data-qc-tags,,,,,,,,,,A data item which is a statement confirming that quality control processes have not been carried out.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000248,dense settlement biome,,"A dense settlement biome is an anthropogenic terrestrial biome which is primarily used for human habitation, recreation, and industry within built structures with little other land use.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01000248,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,dense settlement biome,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A dense settlement biome is an anthropogenic terrestrial biome which is primarily used for human habitation, recreation, and industry within built structures with little other land use.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_176839,vitamin B3,,"Any member of a group of vitamers that belong to the chemical structural class called pyridines that exhibit biological activity against vitamin B<small><sub>3</sub></small> deficiency. Vitamin B<small><sub>3</sub></small> deficiency causes a condition known as <a href=""https://en.wikipedia.org/wiki/Pellagra"" target=""_blank"">pellagra</a> whose symptoms include depression, dermatitis and diarrhea. The vitamers include nicotinic acid and nicotinamide (and their ionized and salt forms).",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:176839,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,vitamin B3,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Any member of a group of vitamers that belong to the chemical structural class called pyridines that exhibit biological activity against vitamin B<small><sub>3</sub></small> deficiency. Vitamin B<small><sub>3</sub></small> deficiency causes a condition known as <a href=""https://en.wikipedia.org/wiki/Pellagra"" target=""_blank"">pellagra</a> whose symptoms include depression, dermatitis and diarrhea. The vitamers include nicotinic acid and nicotinamide (and their ionized and salt forms).",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000315,pork loin back ribs,,Back Ribs that are derived from the pork loin.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000315,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pork loin back ribs,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Back Ribs that are derived from the pork loin.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00005680,bovid material,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00005680,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,bovid material,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000458,buffalo round (raw),,A raw buffalo round cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000458,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,buffalo round (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw buffalo round cut.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100244,family reunion exposure datum,,A human social event in which many human members of an extended family congregate.,FALSE,,,,,,,Family Reunion,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Family_reunion,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100244,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,family reunion exposure datum,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A human social event in which many human members of an extended family congregate.,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000478,Mbum,,A Central African population with a population size of 165000,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000478,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Mbum|Mbum,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Central African population with a population size of 165000,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000471,Punu,,A Bantu Central population with a population size of 317000,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000471,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Punu|Punu,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Bantu Central population with a population size of 317000,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000470,Pende,,A Bantu Central population with a population size of 250000,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000470,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Pende|Pende,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Bantu Central population with a population size of 250000,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000476,Manja,,A Central African population with a population size of 346000,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000476,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Manja|Manja,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Central African population with a population size of 346000,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000473,Vili,,A Bantu Central population with a population size of 100000,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000473,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Vili|Vili,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Bantu Central population with a population size of 100000,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000477,Marba,,A Central African population with a population size of 228000,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000477,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Marba|Marba,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Central African population with a population size of 228000,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000472,Teke,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000472,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Teke|Teke,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000474,Mandar,,A Central African population with a population size of 90500,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000474,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Mandar|Mandar,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Central African population with a population size of 90500,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000479,Nzebi,,A Central African population with a population size of 347614,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000479,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Nzebi|Nzebi,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Central African population with a population size of 347614,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000475,Mangbetu,,A Central African population with a population size of 1.8 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000475,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Mangbetu|Mangbetu,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Central African population with a population size of 1.8 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000484,Wuzlam,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000484,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Wuzlam|Wuzlam,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000483,Tupuri,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000483,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Tupuri|Tupuri,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000488,Kiga,,"A Bantu Eastern population with a population size of 3,420 Millions",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000488,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Kiga|Kiga,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A Bantu Eastern population with a population size of 3,420 Millions",,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000487,Mbeere,,A Embu population with a population size of 195250,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000487,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Mbeere|Mbeere,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Embu population with a population size of 195250,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000489,Lambya,,A Bantu Eastern population with a population size of 89900,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000489,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Lambya|Lambya,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Bantu Eastern population with a population size of 89900,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000482,Yaka,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000482,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Yaka|Yaka,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000486,Chopi,,A Bantu Eastern population with a population size of 760000,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000486,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Chopi|Chopi,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Bantu Eastern population with a population size of 760000,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000481,Gyele,,A Pygmy Central population with a population size of 5500,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000481,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Gyele|Gyele,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Pygmy Central population with a population size of 5500,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000480,Podoko,,A Central African population with a population size of 65000,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000480,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Podoko|Podoko,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Central African population with a population size of 65000,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000485,Yakoma,,A Central African population with a population size of 177000,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000485,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Yakoma|Yakoma,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Central African population with a population size of 177000,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000320,marine environment,,A marine environment and enviroment which is determined by a marine water body.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01000320,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,envoPolar,,,,,,,,marine environment,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A marine environment and enviroment which is determined by a marine water body.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100045,hospitalized (non-ICU) datum,Hospitalized (non-intensive care units),The condition of being treated as a patient in a hospital without admission to an intensive care unit (ICU).,FALSE,,,,,,,Hospitalized (Non-ICU),,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,Hospitalized (non-intensive care units),,,,GENEPIO:0100045,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,hospitalized (non-ICU) datum,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The condition of being treated as a patient in a hospital without admission to an intensive care unit (ICU).,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C82465,Death by Natural Cause,Death by Natural Cause|DIED - NATURALLY,"Death that is attributed to the progression of a disease or pre-existing condition, and which is not attributable to any outside action or force.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Death by Natural Cause|DIED - NATURALLY,,,,NCIT:C82465,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Death by Natural Cause,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Death that is attributed to the progression of a disease or pre-existing condition, and which is not attributable to any outside action or force.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_21731,N-glycosyl compound,,"A glycosyl compound arising formally from the elimination of water from a glycosidic hydroxy group and an H atom bound to a nitrogen atom, thus creating a C-N bond.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:21731,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,N-glycosyl compound,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A glycosyl compound arising formally from the elimination of water from a glycosidic hydroxy group and an H atom bound to a nitrogen atom, thus creating a C-N bond.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_143084,organometalloidal compound,,A compound having bonds between one or more metalloid atoms and one or more carbon atoms of an organyl group.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:143084,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,organometalloidal compound,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A compound having bonds between one or more metalloid atoms and one or more carbon atoms of an organyl group.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00001092,vertebrate food product,,A food product which is derived from or produced by an animal that has a vertibrae.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00001092,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,vertebrate food product,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A food product which is derived from or produced by an animal that has a vertibrae.,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_1045010,Escherichia coli O157,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,Escherichia coli O157,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:1045010,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Escherichia coli O157,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/MP_0001846,increased inflammatory response,,"greater than expected response to injury, infection, or insult",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MP:0001846,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mp.owl,,,,,,,,,increased inflammatory response,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"greater than expected response to injury, infection, or insult",,,,,,,,
http://purl.obolibrary.org/obo/MP_0001845,abnormal inflammatory response,inflammatory response|inflammation,aberrant reaction of the microcirculation characterized by movement of fluid and leukocytes from the blood into extravascular tissues,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,inflammatory response|inflammation,,,,MP:0001845,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mp.owl,,,,,,,,,abnormal inflammatory response,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,aberrant reaction of the microcirculation characterized by movement of fluid and leukocytes from the blood into extravascular tissues,,,,,,,,
http://purl.obolibrary.org/obo/PATO_0001894,phenotypic sex,,"Phenotypic sex refers to an individual's sex as determined by their internal and external genitalia, expression of secondary sex characteristics, and behavior.|An organismal quality inhering in a bearer by virtue of the bearer's physical expression of sexual characteristics.",FALSE,,,,,,,,,,,,,,,,,,,,,NCBI: http://www.ncbi.nlm.nih.gov/books/NBK10943/,,,,"Note that NCBI Biosample has these values allowed:
male | female | pooled male and female | neuter | hermaphrodite | intersex | not determined | missing | not applicable | not collected",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PATO:0001894,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/pato.owl,http://purl.oboInOwllibrary.org/oboInOwl/pato#attribute_slim,,,,,,,,phenotypic sex,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Phenotypic sex refers to an individual's sex as determined by their internal and external genitalia, expression of secondary sex characteristics, and behavior.|An organismal quality inhering in a bearer by virtue of the bearer's physical expression of sexual characteristics.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001074,behavioural risk factor,,"",FALSE,,,,,,,,,,,,,,,,,,,,,"",,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001074,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,behavioural risk factor,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"",,,,,,,,
http://purl.obolibrary.org/obo/UO_0010013,foot,ft,"A length unit which is equal to 0.3048 metres, or 12 inches.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ft,,,,UO:0010013,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,foot,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A length unit which is equal to 0.3048 metres, or 12 inches.",,,,,,,,
http://purl.obolibrary.org/obo/UO_0010016,furlong,fur,"A length unit which is equal to 20,116.8 metres, 660 feet, or 10 chains.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,fur,,,,UO:0010016,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,furlong,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A length unit which is equal to 20,116.8 metres, 660 feet, or 10 chains.",,,,,,,,
http://purl.obolibrary.org/obo/UO_0010014,yard,yd,"A length unit which is equal to 0.9144 metres, or 3 feet.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,yd,,,,UO:0010014,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,yard,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A length unit which is equal to 0.9144 metres, or 3 feet.",,,,,,,,
http://purl.obolibrary.org/obo/UO_0010011,inch,in,A length unit which is equal to 0.0254 metres.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,in,,,,UO:0010011,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,inch,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A length unit which is equal to 0.0254 metres.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0010018,league,lea,"A length unit which is equal to 3 miles, or 4,828.032 metres",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,lea,,,,UO:0010018,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,league,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A length unit which is equal to 3 miles, or 4,828.032 metres",,,,,,,,
http://purl.obolibrary.org/obo/UO_0010012,thou,th|mil,A length unit which is equal to 0.0254 millimetres.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,th|mil,,,,UO:0010012,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,thou,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A length unit which is equal to 0.0254 millimetres.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0010019,maritime length unit,,A maritime length unit is one used primarily at sea.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:0010019,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,maritime length unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A maritime length unit is one used primarily at sea.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0010015,chain,ch,"A length unit which is equal to 20.1168 metres, 66 feet, or 22 yards.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ch,,,,UO:0010015,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,chain,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A length unit which is equal to 20.1168 metres, 66 feet, or 22 yards.",,,,,,,,
http://purl.obolibrary.org/obo/UO_0010017,mile,mi,"A length unit which is equal to 1,609.344 metres, or 8 furlongs.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,mi,,,,UO:0010017,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,mile,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A length unit which is equal to 1,609.344 metres, or 8 furlongs.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_35618,aromatic ether,,Any ether in which the oxygen is attached to at least one aryl substituent.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:35618,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,aromatic ether,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any ether in which the oxygen is attached to at least one aryl substituent.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0500164,Abnormal blood carbon dioxide level,Abnormal blood carbon dioxide level|Abnormal CO2 levels in blood,An abnormality of carbon dioxide (CO2) in the arterial blood.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Abnormal blood carbon dioxide level|Abnormal CO2 levels in blood,,,,HP:0500164,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal blood carbon dioxide level,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An abnormality of carbon dioxide (CO2) in the arterial blood.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0500165,Abnormal blood oxygen level,Abnormal blood oxygen levels|Abnormal blood O2 level|Abnormal O2 blood concentration,An abnormality of the partial pressure of oxygen in the arterial blood.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Abnormal blood oxygen levels|Abnormal blood O2 level|Abnormal O2 blood concentration,,,,HP:0500165,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal blood oxygen level,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An abnormality of the partial pressure of oxygen in the arterial blood.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001960,Reduced Representation method,,"Reproducible genomic subsets, often generated by restriction fragment size selection, containing a manageable number of loci to facilitate re-sampling.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI SRA: Reduced Representation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001960,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Reduced Representation method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Reproducible genomic subsets, often generated by restriction fragment size selection, containing a manageable number of loci to facilitate re-sampling.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00001049,pork chop food product,,"A cut of meat (a meat chop) cut perpendicularly to the spine of the pig and usually containing a rib or part of a vertebra, served as an individual portion.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00001049,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pork chop food product,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A cut of meat (a meat chop) cut perpendicularly to the spine of the pig and usually containing a rib or part of a vertebra, served as an individual portion.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038001,sternal lymph node,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:234388,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0038001,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,sternal lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038003,lower intercostal lymph node,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:234392,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0038003,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,lower intercostal lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038002,upper intercostal lymph node,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:234390,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0038002,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,upper intercostal lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000351,veal hindshank (raw),,A raw veal hindshank cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000351,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,veal hindshank (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw veal hindshank cut.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_22582,obsolete: antibiotic,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:22582,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,obsolete: antibiotic,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/CHEBI_33281,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C15511,Infection Prophylaxis and Management,"management, infection prophylaxis|infectious diseases treatment|Treatment of Infectious Disease|Infectious Diseases / Treatment, General|Infection Prophylaxis and Management","Treat infections with antibacterial, antifungal, antiparasite or antiviral drugs",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"management, infection prophylaxis|infectious diseases treatment|Treatment of Infectious Disease|Infectious Diseases / Treatment, General|Infection Prophylaxis and Management",,,,NCIT:C15511,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Infection Prophylaxis and Management,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Treat infections with antibacterial, antifungal, antiparasite or antiviral drugs",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001878,datetime range start,,The starting date of a process,FALSE,,,,,,,,,,,,,,The starting date of a process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001878,,,http://purl.obolibrary.org/obo/GENEPIO_0001877,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,datetime range start,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102183,algal bloom monitoring,,A monitoring strategy in which samples are collected due to a monitor or assess an algal bloom event.,FALSE,,,,,,,Algal bloom monitoring,,,,,,,,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102183,,,,,,,,,,,,,https://orcid.org/0000-0001-8008-8249,2026-04-13T19:52:38.515Z,,,,,,,,,,,,,,,,,,,algal bloom monitoring,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A monitoring strategy in which samples are collected due to a monitor or assess an algal bloom event.,,,,,,,,
http://purl.obolibrary.org/obo/NBO_0001845,consumption behavior,ingest,Behavior related to the intake of substances.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ingest,,,,,NBO:0001845,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/nbo.owl,,,,,,,,,consumption behavior,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Behavior related to the intake of substances.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03309997,food material for animals,,Food product for animal covers foods intended for consumption by domesticated animals.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03309997,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food material for animals,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Food product for animal covers foods intended for consumption by domesticated animals.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510268,Alaskan Native food claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0268,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510268,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,Alaskan Native food claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_2312,nocardiosis,,"An opportunistic bacterial infectious disease that results_in disseminated infection in immunocompromised hosts, has_material_basis_in Nocardia asteroides. The infection has_symptom pneumonia, has_symptom cellulitis, has_symptom lesions in the brain or meninges, and has_symptom ascending regional lymphadenopathy.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:2312,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,nocardiosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An opportunistic bacterial infectious disease that results_in disseminated infection in immunocompromised hosts, has_material_basis_in Nocardia asteroides. The infection has_symptom pneumonia, has_symptom cellulitis, has_symptom lesions in the brain or meninges, and has_symptom ascending regional lymphadenopathy.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C53550,Non-Neoplastic Liver and Intrahepatic Bile Duct Disorder,Non-Neoplastic Liver and Intrahepatic Bile Duct Disorder|Non-Neoplastic Hepatic Disorder|Non-Neoplastic Hepatic Disease,"A non-neoplastic disorder that affects the liver parenchyma and the intrahepatic bile ducts. Representative examples include hepatitis, cirrhosis, and cholangitis.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Non-Neoplastic Liver and Intrahepatic Bile Duct Disorder|Non-Neoplastic Hepatic Disorder|Non-Neoplastic Hepatic Disease,,,,NCIT:C53550,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Non-Neoplastic Liver and Intrahepatic Bile Duct Disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A non-neoplastic disorder that affects the liver parenchyma and the intrahepatic bile ducts. Representative examples include hepatitis, cirrhosis, and cholangitis.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490353,laminated paper-aluminium-plastic wrapper,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0353,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490353,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,laminated paper-aluminium-plastic wrapper,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001904,phone number (North America),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001904,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,phone number (North America),,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,($area) $central-$station,"/^(:<area>(\([0-9]{3})\)|[0-9]{3})(:<sep>[- ])?(:<central>\d{3})\2(:<station>\d{4})$/, $area $central $station",
http://purl.obolibrary.org/obo/GENEPIO_0001507,diagnostic gene name field,gene name 5|gene name 4|gene name 3|gene name 2|gene name 1|GENEPIO:0100578|GENEPIO:0100576|GENEPIO:0001513|GENEPIO:0001510,A data field which describes the name and version number of the protocol used for diagnostic marker amplification.,FALSE,,,,,,,PCDS:gene_name_*,,,,,,,PCDS: Select the name of the gene used for the diagnostic PCR from the standardized pick list.,,,,,,,,,,,,,,PCDS: E gene (orf4),,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,gene name 5|gene name 4|gene name 3|gene name 2|gene name 1|GENEPIO:0100578|GENEPIO:0100576|GENEPIO:0001513|GENEPIO:0001510,,,,GENEPIO:0001507,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,diagnostic gene name field,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the name and version number of the protocol used for diagnostic marker amplification.,,PCDS: The name of the gene used in the diagnostic RT-PCR test.,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490132,"glass container, aluminum lid",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0132,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490132,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"glass container, aluminum lid",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0101107,sample collection data steward contact email,,"PCDS: Provide the email address of the sample collection data steward. This may or may not be the same individual/organization that collected the sample. If the contact is the same, provide the same address as the 'sample collector contact email'.",FALSE,,,,,,,PCDS:sample_collection_data_steward_contact_email,,,,,,,"PCDS: Provide the email address of the sample collection data steward. This may or may not be the same individual/organization that collected the sample. If the contact is the same, provide the same address as the 'sample collector contact email'.",,,,,,,,,,,,,,PCDS: bloggsj@aglab.ca,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0101107,,,,,,,,,,,,,,2026-04-13T17:16:47.336Z,,,,,,,,,,,,,,,,,,,sample collection data steward contact email,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"PCDS: The email address of the individual responsible for the data governance, (meta)data usage and distribution of the sample.",,,,,,
http://purl.obolibrary.org/obo/CHEBI_29649,narbomycin,,"A macrolide antibiotic that is narbonolide having a 3,4,6-trideoxy-3-(dimethylamino)-β-<small>D</small>-<i>xylo</i>-hexopyranosyl residue attached at position 6. It is biosynthesised by <em>Streptomyces venezuelae</em>.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:44624,,,,,,CHEBI:29649,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,narbomycin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A macrolide antibiotic that is narbonolide having a 3,4,6-trideoxy-3-(dimethylamino)-β-<small>D</small>-<i>xylo</i>-hexopyranosyl residue attached at position 6. It is biosynthesised by <em>Streptomyces venezuelae</em>.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100712,phosphorous measurement characterization tag,phosphorous measurement characterization data tag,A chemical characterization data tag which indicates the presence of data that describes a measurement of phosphorus.,FALSE,,,,,,,phosphorous measurement,,,,,,,Example Guidance: Use this tag to indicate additional data is available that provides characterization information from the quantitative measurement of the amount of phosphorus present in a sample.,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,phosphorous measurement characterization data tag,,,,GENEPIO:0100712,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-05-18T19:08:34.869Z,,,,,,,,,,,,,,,,,,,phosphorous measurement characterization tag,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A chemical characterization data tag which indicates the presence of data that describes a measurement of phosphorus.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000335,pork sirloin tip roast (raw),,A raw pork sirloin tip roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000335,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pork sirloin tip roast (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw pork sirloin tip roast.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_1110040,infectious disease,,is a disease caused by an infectious agent,FALSE,,,,,,,,,,,,,,,,,,,,,IEDB,,,,,infectious disease,,,,,http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:1110040,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,infectious disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,IEDB,,,,is a disease caused by an infectious agent,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03460396,marinading,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=H0396,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03460396,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,marinading,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000139,beef tenderloin (boneless),,"A cut that is a long, narrow, and lean muscle located within the loin, and is the most tender cut of beef.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000139,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef tenderloin (boneless),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A cut that is a long, narrow, and lean muscle located within the loin, and is the most tender cut of beef.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100661,quality control field,quality control slot|qc slot|qc field,A data field which describes quality control information.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,(2026-02-28) Under review for deprecation.,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,quality control slot|qc slot|qc field,,,,GENEPIO:0100661,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788,2023-01-23T00:42:19.315Z,,,,,,,,,,,,,,,,,,,quality control field,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes quality control information.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0000708,Atypical behavior,Psychiatric disturbances|Psychiatric disorders|Behavioural/Psychiatric abnormality|Behavioural symptoms|Behavioural problems|Behavioural disturbances|Behavioural disorders|Behavioural changes|Behavioural abnormality|Behavioral/psychiatric abnormalities|Behavioral symptoms|Behavioral problems|Behavioral disturbances|Behavioral disorders|Behavioral changes|Behavioral abnormality,"Atypical behavior is an abnormality in a person's actions that can be controlled or modulated by the will of the individual. While abnormal behaviors can be difficult to control, they are distinct from other abnormal actions that cannot be affected by the individual's will.",FALSE,,,,,,,,,,,,,,"Atypical behaviors should include or directly affect observable actions. While behavioral disorders often encompass abnormal thoughts, feelings, perceptions, or other cognitions, these alone would not be considered atypical behavioral features.",,,,,,,,,,,,,,,,,,UMLS:C0233514|UMLS:C0004941|SNOMEDCT_US:277843001|SNOMEDCT_US:25786006,,,,,,,,,,,,,,,,,,,,,,,HP:0002456|HP:0002368|HP:0000715,,Psychiatric disturbances|Psychiatric disorders|Behavioural/Psychiatric abnormality|Behavioural symptoms|Behavioural problems|Behavioural disturbances|Behavioural disorders|Behavioural changes|Behavioural abnormality|Behavioral/psychiatric abnormalities|Behavioral symptoms|Behavioral problems|Behavioral disturbances|Behavioral disorders|Behavioral changes|Behavioral abnormality,,,,HP:0000708,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Atypical behavior,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Atypical behavior is an abnormality in a person's actions that can be controlled or modulated by the will of the individual. While abnormal behaviors can be difficult to control, they are distinct from other abnormal actions that cannot be affected by the individual's will.",,,,,,,,
http://purl.obolibrary.org/obo/HP_0000707,Abnormality of the nervous system,Brain and/or spinal cord issue,An abnormality of the nervous system.,FALSE,,,,,,,,,,,,,,"The nervous system comprises the neuraxis (brain, spinal cord, and ventricles), the autonomic nervous system, the enteric nervous system, and the peripheral nervous system.",,,,,,,,,,,,,,,,,,UMLS:C0497552|SNOMEDCT_US:88425004,,,,,,,,,,,,,,,,,,,,,,,HP:0006987|HP:0001333,Brain and/or spinal cord issue,Neurological abnormality|Neurologic abnormalities|Abnormality of the nervous system,,,,HP:0000707,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormality of the nervous system,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An abnormality of the nervous system.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02021012,piece of buffalo (raw),,A raw piece of buffalo.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02021012,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of buffalo (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw piece of buffalo.,,,,,,,,
https://w3id.org/linkml/Definition,Definition,,Base class for definitions.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,linkml:Definition,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Base class for definitions.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0001892,specification of data to be generated in an investigation,NCBI BioProject: Objective,An objective specification which indicates the type of data that will be generated and submitted to a database.,FALSE,,,,,,,,,,,,,,,,,,,,,NIAID GSCID-BRC metadata working group,,,,,specification of data to be generated in an investigation,,"Some examples of Project Objectives are Raw sequence reads, Sequence, Analysis, Assembly, Annotation, Variation, Epigenetic markers, expression, maps, phenotype",,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI BioProject: Objective,,,,OBI:0001892,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,specification of data to be generated in an investigation,,,,,,,Project Objectives,,,,,,,,,,,,,,,,,,,,,"PERSON: Chris Stoeckert, Jie Zheng",,,,An objective specification which indicates the type of data that will be generated and submitted to a database.,,,,project objective,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100911,precipitation measurement value,precipitation measurement value,An environmental data field which describes the amount of water which has fallen during a precipitation process.,FALSE,,,,,,,PCDS:precipitation_measurement_value,,,,,,,PCDS: Provide the quantity of precipitation in the area leading up to the time of sample collection.,,,,,,,,,,,,,,PCDS: 12,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,precipitation measurement value,precipitation measurement value slot,,,,GENEPIO:0100911,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,precipitation measurement value,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the amount of water which has fallen during a precipitation process.,,PCDS: The amount of water which has fallen during a precipitation process.,,,,,,
http://purl.obolibrary.org/obo/CHEBI_18254,ribonucleoside,,Any nucleoside where the sugar component is <small>D</small>-ribose.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:8844|CHEBI:4240|CHEBI:26560|CHEBI:21085|CHEBI:13685|CHEBI:13015|CHEBI:13014,,,,,,CHEBI:18254,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,ribonucleoside,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any nucleoside where the sugar component is <small>D</small>-ribose.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_14089,root caries,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:14089,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,root caries,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000089,phred quality score,,"An assembly quality control datum that describes the quality of the identification of nucleobases generated in sequencing, where the score is logarithimically related to the probability of an error in base calling.",FALSE,,,,,,,,,,,,,,,,,,,,,URI: http://en.wikipedia.org/wiki/Phred_quality_score,,,,,,,>75%,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000089,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,,,,,,,phred quality score,,,,,Run QC,,,,,,,,,,,,,,,,,,,,,,above 30 Qscore,,,Output from MiSeq,,"An assembly quality control datum that describes the quality of the identification of nucleobases generated in sequencing, where the score is logarithimically related to the probability of an error in base calling.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_2148,tuberculous oophoritis,,An urogenital tuberculosis that results_in inflammtion located_in ovary.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:2148,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,tuberculous oophoritis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An urogenital tuberculosis that results_in inflammtion located_in ovary.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C28554,Dead,deceased|dead|Patient Deceased|Loss of Life|EXPIRED/DEATH|EXPIRED|Died|Deceased|Death NOS|Death (event)|Death|Dead|DIED|DEATH|DEAD,The cessation of life.,FALSE,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0002228,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,deceased|dead|Patient Deceased|Loss of Life|EXPIRED/DEATH|EXPIRED|Died|Deceased|Death NOS|Death (event)|Death|Dead|DIED|DEATH|DEAD,,,,NCIT:C28554,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Dead,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The cessation of life.,,,,deceased,,,,
http://purl.obolibrary.org/obo/CHEBI_33459,pnictogen oxoanion,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:33459,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,pnictogen oxoanion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C92743,Birthing Labor,Labor|Birthing Labor,Uterine contractions resulting in cervical change (dilation and/or effacement). (reVITALize),FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Labor|Birthing Labor,,,,NCIT:C92743,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Birthing Labor,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Uterine contractions resulting in cervical change (dilation and/or effacement). (reVITALize),,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03500047,food-grade ash,,Ash which is incorporated into the surface of a food such as cheese.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=N0047,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03500047,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food-grade ash,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Ash which is incorporated into the surface of a food such as cheese.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03460238,food component separation process,,A component separation process at the very least removes one component from an initial entity.  The removed component may be captured as a process output for reuse if not destroyed in the process of removal.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=H0238,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03460238,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food component separation process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A component separation process at the very least removes one component from an initial entity.  The removed component may be captured as a process output for reuse if not destroyed in the process of removal.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_50995,secondary amino compound,,A compound formally derived from ammonia by replacing two hydrogen atoms by organyl groups.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:50995,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,secondary amino compound,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A compound formally derived from ammonia by replacing two hydrogen atoms by organyl groups.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002133,disease cluster,,A disease cluster is an unusually high incidence of a particular disease or disorder occurring in close proximity in terms of both time and geography.,FALSE,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Disease_cluster,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002133,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,disease cluster,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A disease cluster is an unusually high incidence of a particular disease or disorder occurring in close proximity in terms of both time and geography.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00002404,meat roasting,,Roasting is a baking process when the food being baked is meats,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00002404,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,meat roasting,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Roasting is a baking process when the food being baked is meats,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C118677,Very Preterm Infant,Very Preterm Infant,"An age group comprised of infants greater than 28 weeks, 0 days and less than 34 weeks, 0 days.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Very Preterm Infant,,,,NCIT:C118677,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Very Preterm Infant,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An age group comprised of infants greater than 28 weeks, 0 days and less than 34 weeks, 0 days.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C118676,Perinatal Mortality,Perinatal Mortality|Perinatal Death,"Fetal or infant death during the period of time that includes the antepartum, intrapartum, and neonatal stages.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Perinatal Mortality|Perinatal Death,,,,NCIT:C118676,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Perinatal Mortality,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Fetal or infant death during the period of time that includes the antepartum, intrapartum, and neonatal stages.",,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000680,incidence rate ratio,,A measure of association that is the ratio of two incidence rates.,FALSE,,,,,,,IRR,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000680,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,incidence rate ratio,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Philippe Rocca-Serra|Brian S. Alper, Kenneth Wilkins, Joanne Dehnbostel, Muhammad Afzal",,,,A measure of association that is the ratio of two incidence rates.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_2277,gonadal disease,,An endocrine system disease that is located_in the gonads.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:2277,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,gonadal disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An endocrine system disease that is located_in the gonads.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490393,metallized polyamide container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0393,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490393,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,metallized polyamide container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000446,bison round (raw),,A raw bison round cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000446,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,bison round (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw bison round cut.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530291,organic food production,,"An agricultural production process that aims to produce food using natural substances and processes that have a limited negative environmental and human health impact as they encourage the responsible use of energy and natural resources like water, the maintenance of biodiversity, the preservation of regional ecological balances, enhancement of soil fertility, and animal welfare.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0291,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530291,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,organic food production,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An agricultural production process that aims to produce food using natural substances and processes that have a limited negative environmental and human health impact as they encourage the responsible use of energy and natural resources like water, the maintenance of biodiversity, the preservation of regional ecological balances, enhancement of soil fertility, and animal welfare.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03450026,cooking in small amount of fat or oil,,"Cooked with sufficient fat or oil to coat and moisten the food being prepared, but not cooked in enough fat or oil to immerse the food.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=G0026,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03450026,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,cooking in small amount of fat or oil,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Cooked with sufficient fat or oil to coat and moisten the food being prepared, but not cooked in enough fat or oil to immerse the food.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001874,updated date,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001874,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,updated date,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00004480,"populated place, Iran",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00004480,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Iran",http://purl.obolibrary.org/obo/GAZ_00004474,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100562,no quality control issues identified datum,,A data item which is a statement confirming that quality control processes were carried out and no quality issues were detected.,FALSE,,,,,,,no quality control issues identified,,,,,,,"Example: This statement may be used in conjunction with the quality control determination statement ""sequence passed quality control"" to confirm that no issues were identified. It is possible that a sequence may pass QC but still have some issues worthy of noting e.g. novel indel detected. Note: quality control here refers to quality of the raw reads, consensus sequence or assembly, not the qaulity of analytical results e.g. lineage assignment.",,,,,,,,,,,,,,,,,ready for release,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100562,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-1107-9135,2023-01-23T00:42:19.315Z,,,,,,,,,,,,,,,,,,,no quality control issues identified datum,,,,,,,,,,,,,,,,,,,,,,The PHA4GE QC Contextual Data Tags Specification: https://github.com/pha4ge/contextual-data-qc-tags,,,,,,,,,,A data item which is a statement confirming that quality control processes were carried out and no quality issues were detected.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0010070,picogram per milliliter,pg/mL,A gram per milliliter unit which is equal to one picogram per one milliliter.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,pg/mL,,,,UO:0010070,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,picogram per milliliter,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A gram per milliliter unit which is equal to one picogram per one milliliter.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0010077,PCR quantification cycle,Ct,A count unit of how many Polymerase Chain Reaction (PCR) cycles it took to detect a real signal from a sample. Equivalent to the PCR cycle number at which a sample's reaction curve intersects the threshold line.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Ct,,,,UO:0010077,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,PCR quantification cycle,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A count unit of how many Polymerase Chain Reaction (PCR) cycles it took to detect a real signal from a sample. Equivalent to the PCR cycle number at which a sample's reaction curve intersects the threshold line.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0010072,microgram per microliter,µg/µL|ug/uL|mcg/mcL,A mass unit density which is equal to mass of an object in nanograms divided by the volume in microliters.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,µg/µL|ug/uL|mcg/mcL,,,,UO:0010072,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,microgram per microliter,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A mass unit density which is equal to mass of an object in nanograms divided by the volume in microliters.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_8419,pristinamycin IC,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:8419,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,pristinamycin IC,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_8418,Pristinamycin IB,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:8418,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,Pristinamycin IB,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000321,pork spareribs (raw),,Raw pork spareribs.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000321,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pork spareribs (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Raw pork spareribs.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02021410,deer material,,Material that derives from some deer.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02021410,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,deer material,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Material that derives from some deer.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001424,lab test record,,ISSUE: lab test results are appropriate to lab test types.  Logic around that?,FALSE,,,,,,,,,,,,,,ISSUE: lab test results are appropriate to lab test types.  Logic around that?,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001424,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,lab test record,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C16268,Elderly,Senior Citizen|Elderly (Over 65)|Elderly|ELDERLY|Aged 65 and Over,An age group comprised of individuals 65 years of age and older.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Senior Citizen|Elderly (Over 65)|Elderly|ELDERLY|Aged 65 and Over,,,,NCIT:C16268,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Elderly,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An age group comprised of individuals 65 years of age and older.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100441,air temperature,air_temperature|air temperature,A data field which describes the temperature of some air.,FALSE,,,,,,,PCDS:air_temperature,,,,,,,PCDS: Provide the numerical value for the temperature of the air (without units).,,,,,,,,,,,,,,PCDS: 25,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,air_temperature|air temperature,air temperature slot,,,,GENEPIO:0100441,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,air temperature,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the temperature of some air.,,PCDS: The temperature of some air.,,,,,,
http://purl.obolibrary.org/obo/OMIT_0026010,"Ribosome Inactivating Proteins, Type 2",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OMIT:0026010,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/omit.owl,,,,,,,,,"Ribosome Inactivating Proteins, Type 2",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100615,food quality date,food_quality_date|food quality date,"A data field which describes the date recommended for the use of a product while at peak quality, this date is not a reflection of safety unless used on infant formula.",FALSE,,,,,,,PCDS:food_quality_date,,,,,,,"PCDS: This date is typically labeled on a food product as 'best if used by', best by', 'use by', or 'freeze by'. If the date is known, leave blank or provide a null value. Provide the date in ISO 8601 format, i.e. 'YYYY-MM-DD'.",,,,,,,,,,,,,,PCDS: 2020-05-25,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,food_quality_date|food quality date,food quality date slot,,,,GENEPIO:0100615,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,food quality date,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A data field which describes the date recommended for the use of a product while at peak quality, this date is not a reflection of safety unless used on infant formula.",,"PCDS: A date recommended for the use of a product while at peak quality, this date is not a reflection of safety unless used on infant formula.",,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100501,contact with known Monkeypox case exposure process,contact with known Monkeypox case,A process occuring within or in the vicinity of a human with a confirmed case of COVID-19 that exposes the recipient organism to Monkeypox.,FALSE,,,,,,,Contact with Known Monkeypox Case,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,contact with known Monkeypox case,,,,GENEPIO:0100501,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-01-23T00:42:19.315Z,,,,,,,,,,,,,,,,,,,contact with known Monkeypox case exposure process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A process occuring within or in the vicinity of a human with a confirmed case of COVID-19 that exposes the recipient organism to Monkeypox.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000148,isolate raw read filename,,An isolate raw read filename is the file name (http://edamontology.org/data_1050) of the raw read file created by a genomic sequencing assay.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000148,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,isolate raw read filename,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An isolate raw read filename is the file name (http://edamontology.org/data_1050) of the raw read file created by a genomic sequencing assay.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490320,natural polymer container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0320,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490320,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,natural polymer container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_194,Campylobacter,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,Campylobacter,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:194,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Campylobacter,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00010090,Directly Governed City,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00010090,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Directly Governed City,http://purl.obolibrary.org/obo/GAZ_00002801,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,directly governed city (North Korea),,,,
http://purl.obolibrary.org/obo/GENEPIO_0100281,epidemiology case ID,case identifier|case ID,An identifier field which describes the identifier used to specify an epidemiologically detected case of disease.,FALSE,,,,,,,PCDS:case_id,,,,,,,PCDS: Provide the case identifer. The case ID greatly facilitates linkage between laboratory and epidemiological data. The case ID may be considered identifiable information. Consult the data steward before sharing.,,,,,,,,,,,,,,PCDS: ABCD1234,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,case identifier|case ID,epidemiology case identifier,,,,GENEPIO:0100281,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,epidemiology case ID,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An identifier field which describes the identifier used to specify an epidemiologically detected case of disease.,,PCDS: The identifier used to specify an epidemiologically detected case of disease.,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000333,pork sirloin tip (raw),,A raw pork sirloin tip cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000333,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pork sirloin tip (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw pork sirloin tip cut.,,,,,,,,
http://purl.obolibrary.org/obo/OMP_0000207,serotype phenotype,serovar,A microbial phenotype that is distinguished by the presence a specific surface antigen.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,serovar,,,,OMP:0000207,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/NCIT_C53471,,,,,,serotype phenotype,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A microbial phenotype that is distinguished by the presence a specific surface antigen.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0004175,internal genitalia,internal genitals|internal genitalia,"The internal genitalia are the internal sex organs such as the uterine tube, the uterus and the vagina in female mammals, and the testis, seminal vesicle, ejaculatory duct and prostate in male mammals.",FALSE,,,,,,,,,,,,,,TODO: make a subdivision of reproductive system. Relabel. See https://github.com/obophenotype/uberon/issues/547,,,,,,,,,,,,,,,,,,FMA:45652,,,,,,,,,,,,,,,,,,,,,,,,,internal genitals|internal genitalia,,,,UBERON:0004175,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,internal genitalia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The internal genitalia are the internal sex organs such as the uterine tube, the uterus and the vagina in female mammals, and the testis, seminal vesicle, ejaculatory duct and prostate in male mammals.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0004176,external genitalia,external genitalia,"The external genitalia are the outer sex organs, such as the penis or vulva in mammals.",FALSE,,,,,,,,,,,,,,TODO: make a subdivision of reproductive system. Relabel. See https://github.com/obophenotype/uberon/issues/547,,,,,,,,,,,,,,,,,,SCTID:362207005|FMA:45643,,,,,,,,,,,,,,,,,,,,,,,,,external genitalia,,,,UBERON:0004176,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,external genitalia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The external genitalia are the outer sex organs, such as the penis or vulva in mammals.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0004177,hemopoietic organ,lymphoid organ|lymph organ|hematopoeitic or lymphoid organ,Organ that is part of the hematopoietic system.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SCTID:361338006|MA:0000747|FMA:7143|EMAPA:37665|BTO:0004605,,,,,,,,,,,,,,,,,,,,,,,,,organa haemopoietica organ|organ of organa haemopoietica|organ of hematopoietic system|organ of haemopoietic system|organ of haematological system|hematopoietic system organ|hematopoeitic organ|haemopoietic system organ|haematological system organ,lymphoid organ|lymph organ|hematopoeitic or lymphoid organ,,,UBERON:0004177,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,hemopoietic organ,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Organ that is part of the hematopoietic system.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00002954,beef prime rib roast,,"A cut of beef from the primal rib, one of the nine primal cuts of beef. While the entire rib section comprises ribs six through 12, a standing rib roast may contain anywhere from two to seven ribs.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00002954,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef prime rib roast,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A cut of beef from the primal rib, one of the nine primal cuts of beef. While the entire rib section comprises ribs six through 12, a standing rib roast may contain anywhere from two to seven ribs.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100571,low percent genome captured datum,,A data item that describes sequence data in which the entire length of the genome is not sufficiently sequenced (low breadth of coverage).,FALSE,,,,,,,low percent genome captured,,,,,,,,,,,,,,,,,,,,,,,,ready for release,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100571,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-1107-9135,2023-01-23T00:42:19.315Z,,,,,,,,,,,,,,,,,,,low percent genome captured datum,,,,,,,,,,,,,,,,,,,,,,The PHA4GE QC Contextual Data Tags Specification: https://github.com/pha4ge/contextual-data-qc-tags,,,,,,,,,,A data item that describes sequence data in which the entire length of the genome is not sufficiently sequenced (low breadth of coverage).,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03311663,beef steak (raw),,A raw beef steak.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://bioregistry.io/reference/siren:F11663,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03311663,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef steak (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef steak.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001024,obsolete: take out restaurant,,A restaurant providing prepared meals or other food items that the purchaser intends to eat elsewhere,TRUE,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Take-out,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001024,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: take out restaurant,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,http://purl.obolibrary.org/obo/ENVO_01000972,,,A restaurant providing prepared meals or other food items that the purchaser intends to eat elsewhere,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_36709,aminoquinoline,,Any member of the class of quinolines in which the quinoline skeleton is substituted by one or more amino or substituted-amino groups.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:36709,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,aminoquinoline,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any member of the class of quinolines in which the quinoline skeleton is substituted by one or more amino or substituted-amino groups.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001206,patient type,,A person which has a patient care role.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001206,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,patient type,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A person which has a patient care role.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0081239,injection anthrax,,An anthrax disease that is characterized by infection at the injection site or deep under the skin or in the muscle where the drug was injected and is caused by heroin contaminated with anthrax spores.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0081239,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,injection anthrax,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An anthrax disease that is characterized by infection at the injection site or deep under the skin or in the muscle where the drug was injected and is caused by heroin contaminated with anthrax spores.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_13226,oculoglandular tularemia,,A tularemia that results_in inflammation of eye and swelling of lymph glands in front of the ear.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:13226,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,oculoglandular tularemia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A tularemia that results_in inflammation of eye and swelling of lymph glands in front of the ear.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00005901,Territory of Ashmore and Cartier Islands,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,INSDC:country:ashmore and cartier islands,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00005901,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Territory of Ashmore and Cartier Islands,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00005908,Territory of Norfolk Island,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00005908,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Territory of Norfolk Island,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00005909,Australian Antarctic Territory,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00005909,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Australian Antarctic Territory,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C17005,Population Group,population_group|population group|population|Subpopulation|Population Group|Population|Group,"A group of individuals united by a common factor (e.g., geographic location, ethnicity, disease, age, sex).",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,population_group|population group|population|Subpopulation|Population Group|Population|Group,,,,NCIT:C17005,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Population Group,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A group of individuals united by a common factor (e.g., geographic location, ethnicity, disease, age, sex).",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000036,beef sirloin tip center roast (raw),,A raw beef sirloin tip center roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000036,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef sirloin tip center roast (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef sirloin tip center roast.,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_7770009,disease of genetic or genomic mechanism,,"A grouping class for human diseases caused by genetic or genomic alterations, including chromosomal abnormalities and heritable mutations.",FALSE,,,,,,,,,,,,,,This term is intended solely for classification purposes and should not be used for direct data annotation.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MONDO:7770009,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,,,,,,,,,disease of genetic or genomic mechanism,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A grouping class for human diseases caused by genetic or genomic alterations, including chromosomal abnormalities and heritable mutations.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102282,GenapSys GS111,,"A DNA sequencer manufactured by GenapSys which uses directCMOS-based impedance detection technology to perform high-accuracy sequencing without optics, suitable for various genomic applications.",FALSE,,,,,,,GS111,,,,,,,,,,,,,,https://www.biorxiv.org/content/10.1101/604553v1.full.pdfhttps://pmc.ncbi.nlm.nih.gov/articles/PMC8985210/,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102282,,,,,,,,,,,,,https://orcid.org/0000-0002-7654-6902|https://orcid.org/0000-0001-8008-8249,2026-03-30T14:26:04.627Z,,,,,,,,,,,,,,,,,,,GenapSys GS111,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A DNA sequencer manufactured by GenapSys which uses directCMOS-based impedance detection technology to perform high-accuracy sequencing without optics, suitable for various genomic applications.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00004482,lamb primal cut,,A cut of meat that is initially separated from the carcass of a lamb during butchering.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00004482,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lamb primal cut,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A cut of meat that is initially separated from the carcass of a lamb during butchering.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001153,sample collected by,sample_collected_by|sample collected by,A data field which describes the name of the organization with which the sample collector is affiliated.,FALSE,,,,,,,PCDS:sample_collected_by,,,,,,,"PCDS: The name of the agency should be written out in full, (with minor exceptions) and be consistent across multiple submissions.",,,,,,,,,,,,,,PCDS: University of Calgary,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,sample_collected_by|sample collected by,sample collected by slot,,,,GENEPIO:0001153,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,sample collected by,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the name of the organization with which the sample collector is affiliated.,,PCDS: The name of the agency that collected the original sample.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100912,precipitation measurement unit,precipitation measurement unit,An environmental data field which describes the units of measurement for the amount of water which has fallen during a precipitation process.,FALSE,,,,,,,PCDS:precipitation_measurement_unit,,,,,,,PCDS: Provide the units of precipitation by selecting a value from the pick list.,,,,,,,,,,,,,,PCDS: inch,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,precipitation measurement unit,precipitation measurement unit slot,,,,GENEPIO:0100912,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,precipitation measurement unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the units of measurement for the amount of water which has fallen during a precipitation process.,,PCDS: The units of measurement for the amount of water which has fallen during a precipitation process.,,,,,,
http://purl.obolibrary.org/obo/STATO_0000010,coordinate system,,"In geometry, a coordinate system is a system which uses one or more numbers, or coordinates, to uniquely determine the position of a point or other geometric element on a manifold such as Euclidean space.",FALSE,,,,,,,,,,,,,,"Damion Dooley's note:Damion Dooley's note: Outstanding issue: How to attach units to each dimension?  This depends on the instance of the problem involving a dimension?

Linear offset can be decimal or integer or complex, or a count.
  - Can have a unit: meter, kilometer, foot, light-year, oranges, apples, fruit

Angular offset can be radians or degrees.",,,,,,,http://en.wikipedia.org/wiki/Coordinate_system,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000010,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,coordinate system,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra|Orlaith Burke|Alejandra Gonzalez-Beltran,,,,"In geometry, a coordinate system is a system which uses one or more numbers, or coordinates, to uniquely determine the position of a point or other geometric element on a manifold such as Euclidean space.",,,,n-dimensional coordinate system,,,,
http://purl.obolibrary.org/obo/FOODON_00001567,animal primal cut,,A cut of meat that is initially separated from the carcass of an animal during butchering.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00001567,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,animal primal cut,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A cut of meat that is initially separated from the carcass of an animal during butchering.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03305613,herring fillet (pickled),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://bioregistry.io/reference/siren:F5613,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03305613,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,herring fillet (pickled),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00013726,"populated place, Azerbaijan",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00013726,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Azerbaijan",http://purl.obolibrary.org/obo/GAZ_00004941,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/IAO_0000032,scalar measurement datum,,"a scalar measurement datum is a measurement datum that is composed of two parts, numerals and a unit label.|A scalar measurement datum is a measurement datum that is composed of two parts, numerals and a unit label.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Would write this as: has_part some 'measurement unit label' and has_part some numeral and has_part exactly 2, except for the fact that this won't let us take advantage of OWL reasoning over the numbers. Instead use has measurment value property to represent the same. Use has measurement unit label (subproperty of has_part) so we can easily say that there is only one of them.|2009-03-16: we decided to keep datum singular in scalar measurement datum, as in
this case we explicitly refer to the singular form",scalar measurement datum,,,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,IAO:0000032,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/iao.owl|http://purl.obolibrary.org/obo/apollo_sv.owl,,,,,,,,,scalar measurement datum,,,,,,,,,,,,,,,,,,,,,,,,,,,,PERSON: Melanie Courtot|PERSON: Alan Ruttenberg,,,,"a scalar measurement datum is a measurement datum that is composed of two parts, numerals and a unit label.|A scalar measurement datum is a measurement datum that is composed of two parts, numerals and a unit label.",,,,,,,,
http://purl.obolibrary.org/obo/OBI_0001617,PubMed ID,,"A CRID symbol that is sufficient to look up a citation from the PubMed, a literature database of life sciences and biomedical information.",FALSE,,,,,,,PubMed Identifier|PMID,,,,,,,,,,,,,,Website: http://en.wikipedia.org/wiki/Wikipedia:PMID,,,,"Edits was made on Aug 24, 2016 based on OBI dev call, details see tracker: https://sourceforge.net/p/obi/obi-terms/819/",PubMed ID,,,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0001617,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PubMed ID,,,,,,,Publication Citation,,,,,,,,,,,,,,,,,,,,,"Person: Chris Stoeckert, Jie Zheng",,,,"A CRID symbol that is sufficient to look up a citation from the PubMed, a literature database of life sciences and biomedical information.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102153,Ion GeneStudio S5 Prime,,"An Ion GeneStudio sequencing instrument model that utilises Ion semiconductor sequencing technology to deliver rapid, targeted sequencing with minimal input and scalable throughput; designed to run with 2 S5 chips, with a faster performance compared to other S5 models.",FALSE,,,,,,,,,,,,,,,,,,,,,https://www.thermofisher.com/ca/en/home/life-science/sequencing/next-generation-sequencing/instruments/ion-genestudio-system/models.html,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102153,,,,,,,,,,,,,https://orcid.org/0000-0002-7654-6902|https://orcid.org/0000-0001-8008-8249,2025-03-21T01:14:47.111Z,,,,,,,,,,,,,,,,,,,Ion GeneStudio S5 Prime,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An Ion GeneStudio sequencing instrument model that utilises Ion semiconductor sequencing technology to deliver rapid, targeted sequencing with minimal input and scalable throughput; designed to run with 2 S5 chips, with a faster performance compared to other S5 models.",,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000023,stream,streamlet|stream bend|millstream|lode|fork (hydrographic|braided stream,A watercourse which is linear and flows across the solid portion of a planetary surface.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Stream|TGN:21109|TGN:21108|TGN:21107|TGN:21106|SWEETRealm:Stream|LTER:562|Geonames:H.STMS|Geonames:H.STM|FTT:721|FTT:593|FTT:371|FTT:303|FTT:1261|FTT:1225|FTT:1221|FTT:105|EcoLexicon:stream,,,,,,,,,,,,,,,,,,,,,,,,watercourse,streams,streamlet|stream bend|millstream|lode|fork (hydrographic|braided stream,,,ENVO:00000023,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,stream,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A watercourse which is linear and flows across the solid portion of a planetary surface.,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0003939,muscle tissue disorder,muscular disorder|muscle tissue disease or disorder|muscle tissue disease|muscle organ disease or disorder|muscle organ disease|disorder of muscle tissue|disorder of muscle organ|disease or disorder of muscle tissue|disease or disorder of muscle organ|disease of muscle tissue|disease of muscle organ,A disease involving the muscle tissue.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MESH:D009135|ICD10CM:M60-M63|DOID:66|DOID:0080000,,,,,,,,,,,,,,,,,,,,,,,,,muscular disorder|muscle tissue disease or disorder|muscle tissue disease|muscle organ disease or disorder|muscle organ disease|disorder of muscle tissue|disorder of muscle organ|disease or disorder of muscle tissue|disease or disorder of muscle organ|disease of muscle tissue|disease of muscle organ,,,,MONDO:0003939,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#rare_grouping|http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,muscle tissue disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A disease involving the muscle tissue.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001556,exposure via diaper changing (human fecal),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001556,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,exposure via diaper changing (human fecal),,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00004089,heating liquid in container,,A heating container process in which the temperature of contained liquid is raised to a threshold.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00004089,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,heating liquid in container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A heating container process in which the temperature of contained liquid is raised to a threshold.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100572,read lengths shorter than expected datum,,"A data item that describes average sequence read lengths that are below the expected size range given a particular sequencing instrument, reagents and conditions.",FALSE,,,,,,,read lengths shorter than expected,,,,,,,,,,,,,,,,,,,,,,,,ready for release,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100572,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-1107-9135,2023-01-23T00:42:19.315Z,,,,,,,,,,,,,,,,,,,read lengths shorter than expected datum,,,,,,,,,,,,,,,,,,,,,,The PHA4GE QC Contextual Data Tags Specification: https://github.com/pha4ge/contextual-data-qc-tags,,,,,,,,,,"A data item that describes average sequence read lengths that are below the expected size range given a particular sequencing instrument, reagents and conditions.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002108,draft travel log specification,,This record details a person's travel movement and duration for epidemiological analysis.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002108,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,draft travel log specification,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,This record details a person's travel movement and duration for epidemiological analysis.,,,"order:
GENEPIO:0000121 # start date
GENEPIO:0000122 # end date
GENEPIO:0001783 # travel destination
GENEPIO:0001064 # travel mode
GENEPIO:0001065 # travel reason",,,,,
http://purl.obolibrary.org/obo/FOODON_03510135,kosher for passover claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0135,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510135,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,kosher for passover claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530112,food industry preparation process,,The process of preparing food in an industrial facility.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0112,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530112,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food industry preparation process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The process of preparing food in an industrial facility.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C191626,Sudden Cardiac Death Related to COVID-19,Sudden cardiac death|Sudden Cardiac Death Related to COVID-19|SCD Related to COVID-19,Sudden cardiac death in a patient with probable or confirmed acute COVID-19.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Sudden cardiac death|Sudden Cardiac Death Related to COVID-19|SCD Related to COVID-19,,,,NCIT:C191626,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Sudden Cardiac Death Related to COVID-19,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Sudden cardiac death in a patient with probable or confirmed acute COVID-19.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C191627,Sudden Cardiac Death with Return of Spontaneous Circulation Related to COVID-19,Sudden cardiac death with ROSC|Sudden Cardiac Death with Return of Spontaneous Circulation Related to COVID-19,"Unexpected death caused by sudden cardiac arrest with asystole, pulseless electrical activity, sustained ventricular tachycardia, or ventricular fibrillation in a patient with probable or confirmed acute COVID-19 despite successful return of spontaneous circulation (ROSC).",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Sudden cardiac death with ROSC|Sudden Cardiac Death with Return of Spontaneous Circulation Related to COVID-19,,,,NCIT:C191627,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Sudden Cardiac Death with Return of Spontaneous Circulation Related to COVID-19,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Unexpected death caused by sudden cardiac arrest with asystole, pulseless electrical activity, sustained ventricular tachycardia, or ventricular fibrillation in a patient with probable or confirmed acute COVID-19 despite successful return of spontaneous circulation (ROSC).",,,,,,,,
http://purl.obolibrary.org/obo/SO_0001260,sequence_collection,sequence collection,A collection of discontinuous sequences.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,sequence collection,,,,SO:0001260,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/so.owl,,,,,,,,,sequence_collection,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A collection of discontinuous sequences.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000196,pH,,A dimensionless concentration notation which denotes the acidity of a solution in terms of activity of hydrogen ions (H+).,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:0000196,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,pH,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A dimensionless concentration notation which denotes the acidity of a solution in terms of activity of hydrogen ions (H+).,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000190,ratio unit,,A dimensionless unit which denotes an amount or magnitude of one quantity relative to another.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:0000190,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,ratio unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A dimensionless unit which denotes an amount or magnitude of one quantity relative to another.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000198,milliliter per kilogram,ml/kg|millilitre per kilogram,A specific volume unit which is equal to a thousandth of a liter per kilogram or 10^[-3] l/kg.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ml/kg|millilitre per kilogram,,,,UO:0000198,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,milliliter per kilogram,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A specific volume unit which is equal to a thousandth of a liter per kilogram or 10^[-3] l/kg.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000193,purity percentage,,A dimensionless percent unit which denotes the homogeneity of a biomaterial.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:0000193,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,purity percentage,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A dimensionless percent unit which denotes the homogeneity of a biomaterial.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000195,degree Fahrenheit,F,A temperature unit which is equal to 5/9ths of a kelvin. Negative 40 degrees Fahrenheit is equal to negative 40 degrees Celsius.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,F,,,,UO:0000195,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,degree Fahrenheit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A temperature unit which is equal to 5/9ths of a kelvin. Negative 40 degrees Fahrenheit is equal to negative 40 degrees Celsius.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000199,microliter per kilogram,ul/kg|microlitre per kilogram,A specific volume unit which is equal to one millionth of a liter per kilogram or 10^[-6] l/kg.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ul/kg|microlitre per kilogram,,,,UO:0000199,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,microliter per kilogram,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A specific volume unit which is equal to one millionth of a liter per kilogram or 10^[-6] l/kg.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000197,liter per kilogram,litre per kilogram|l/kg,A specific volume unit which is equal to one liter volume occupied by one kilogram of a particular substance.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,litre per kilogram|l/kg,,,,UO:0000197,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,liter per kilogram,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A specific volume unit which is equal to one liter volume occupied by one kilogram of a particular substance.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000191,fraction,,A dimensionless ratio unit which relates the part (the numerator) to the whole (the denominator).,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:0000191,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,fraction,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A dimensionless ratio unit which relates the part (the numerator) to the whole (the denominator).,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000194,confluence percentage,,"A dimensionless percent unit which denotes the density of an attached or monolayer culture (e.g., cell culture).",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:0000194,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,confluence percentage,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A dimensionless percent unit which denotes the density of an attached or monolayer culture (e.g., cell culture).",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001536,exposure group unknown health status count,,The count of individuals or animals for which no health status is available on a certain date/time from a group that was likely exposed to a pathogen.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001536,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,exposure group unknown health status count,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,The count of individuals or animals for which no health status is available on a certain date/time from a group that was likely exposed to a pathogen.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001992,WGS strategy,,Random sequencing of the whole genome.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI SRA: WGS,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001992,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WGS strategy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Random sequencing of the whole genome.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0060118,thoracic disease,,A disease of anatomical entity that is located_in the thoracic cavity.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0060118,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,thoracic disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A disease of anatomical entity that is located_in the thoracic cavity.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C93874,Organization Name,Organization.name|Organization Name|Organization,A textual identifier for an organization.,FALSE,,,,,,,,,,,,,,,,,,,,,NCI Thesaurus,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,Organization.name|Organization Name|Organization,,,,NCIT:C93874,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Organization Name,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A textual identifier for an organization.,,,,organization name,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100422,sequenced by contact email,GENEPIO:0001253,A data field which describes the email address of the contact responsible for follow-up regarding the sequence.,FALSE,,,,,,,PCDS:sequenced_by_contact_email,,,,,,,PCDS: The email address can represent a specific individual or lab.,,,,,,,,,,,"(2026-03-29): At least one pathogen-genomics-package specification accidently used the ID for ""specimen processing"" [GENEPIO:0001253] for this class. The ID has been added as a skos:relatedMatch to help with linkage for effected users.",,,PCDS: RespLab@lab.ca,,,metadata incomplete,,,,,,,,,,,,,,,,,GENEPIO:0001253,,,,,,,,sequenced_by_contact_email|sequenced by contact email,sequenced by contact email slot,,,,GENEPIO:0100422,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,sequenced by contact email,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the email address of the contact responsible for follow-up regarding the sequence.,,PCDS: The email address of the contact responsible for follow-up regarding the sequence.,,,,,,
http://purl.obolibrary.org/obo/ENVO_00003860,pig manure,,Manure which is primarily composed of pig feces.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00003860,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,pig manure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Manure which is primarily composed of pig feces.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000480,glass,,Glass is an amorphous (non-crystalline) solid which is often transparent.,FALSE,,,,,,,,,,,,,,"This class refers to all forms of glass. For the familiar form present in window panes and drinking glasses, consider silica-based glass.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01000480,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,glass,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Glass is an amorphous (non-crystalline) solid which is often transparent.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100790,chemical oxygen demand cod measurement method,chemical oxygen demand (COD) measurement method,An environmental data field which describes the method used to measure chemical oxygen demand (COD).,FALSE,,,,,,,PCDS:chemical_oxygen_demand_cod_measurement_method,,,,,,,PCDS: Provide the name of the procedure or technology used to measure COD.,,,,,,,,,,,,,,PCDS: Hach LCK test kit,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,chemical oxygen demand (COD) measurement method,chemical oxygen demand (COD) measurement method slot,,,,GENEPIO:0100790,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,chemical oxygen demand cod measurement method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the method used to measure chemical oxygen demand (COD).,,PCDS: The method used to measure chemical oxygen demand (COD).,,,,,,
http://purl.obolibrary.org/obo/FOODON_03460293,curing or aging 6 to 12 months,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=H0293,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03460293,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,curing or aging 6 to 12 months,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00049570,Dependancy (Grenada),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00049570,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Dependancy (Grenada),http://purl.obolibrary.org/obo/GAZ_02000573|http://purl.obolibrary.org/obo/GAZ_02000564,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000189,beef brisket,,"A beef cut that is located on the underside of the animal, below the chuck primal, which extends from between the forelegs to the plate.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000189,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef brisket,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A beef cut that is located on the underside of the animal, below the chuck primal, which extends from between the forelegs to the plate.",,,,,,,,
http://purl.obolibrary.org/obo/HP_0004395,Malnutrition,Malnutrition,A deficiency in the intake of energy and nutrients.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0162429|SNOMEDCT_US:70241007|SNOMEDCT_US:65404009|SNOMEDCT_US:47563007|SNOMEDCT_US:2492009|SNOMEDCT_US:248325000,,,,,,,,,,,,,,,,,,,,,,,,,Malnutrition,,,,HP:0004395,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Malnutrition,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A deficiency in the intake of energy and nutrients.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0004396,Poor appetite,Poor appetite|Loss of appetite|Decreased appetite,A reduced desire to eat.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0232462|SNOMEDCT_US:64379006,,,,,,,,,,,,,,,,,,,,,,,,,Poor appetite|Loss of appetite|Decreased appetite,,,,HP:0004396,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Poor appetite,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A reduced desire to eat.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_26401,purines,,A class of imidazopyrimidines that consists of purine and its substituted derivatives.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:13678,,,,,,CHEBI:26401,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,purines,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A class of imidazopyrimidines that consists of purine and its substituted derivatives.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00002940,French Republic,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,INSDC:country:france,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00002940,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,French Republic,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00002944,Portuguese Republic,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,INSDC:country:portugal,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00002944,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Portuguese Republic,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00003305,beef porterhouse steak,,A beef steak that is prepared from the beef short loin. The maximum width of the tenderloin must be atleast 1.25 inches (3.2cm) when measured parallel to the length of the backbone.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00003305,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef porterhouse steak,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A beef steak that is prepared from the beef short loin. The maximum width of the tenderloin must be atleast 1.25 inches (3.2cm) when measured parallel to the length of the backbone.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100131,PacBio RS,,A DNA sequencer manufactured by the Pacific Biosciences corporation which utilizes “SMRT Cells” for single-molecule real-time sequencing. The RS was the first model made by the company.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100131,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,PacBio RS,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A DNA sequencer manufactured by the Pacific Biosciences corporation which utilizes “SMRT Cells” for single-molecule real-time sequencing. The RS was the first model made by the company.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_4885,ethionamide,,A thiocarboxamide that is pyridine-4-carbothioamide substituted by an ethyl group at position 2. A prodrug that undergoes metabolic activation by conversion to the corresponding <em>S</em>-oxide.,FALSE,,,,,,,Eto|ETH,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:4885,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,ethionamide,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A thiocarboxamide that is pyridine-4-carbothioamide substituted by an ethyl group at position 2. A prodrug that undergoes metabolic activation by conversion to the corresponding <em>S</em>-oxide.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102288,Tapestri sequencing instrument model,,"A DNA sequencer manufactured by Tapestri which combines microfluidics and targeted sequencing to perform single-cell DNA analysis, enabling high-resolution insights into cellular heterogeneity.",FALSE,,,,,,,,,,,,,,,,,,,,,https://missionbio.com/products/platform/,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102288,,,,,,,,,,,,,https://orcid.org/0000-0002-7654-6902|https://orcid.org/0000-0001-8008-8249,2026-03-30T14:26:04.627Z,,,,,,,,,,,,,,,,,,,Tapestri sequencing instrument model,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A DNA sequencer manufactured by Tapestri which combines microfluidics and targeted sequencing to perform single-cell DNA analysis, enabling high-resolution insights into cellular heterogeneity.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100134,PacBio Sequel II,,"A DNA sequencer built upon single molecule real-time sequencing technology, optimized for generation of highly accurate (""HiFi"") long reads, and which is manufactured by the Pacific Biosciences corporation.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100134,,,,,,,,,,,,,https://orcid.org/0000-0002-7654-6902|https://orcid.org/0000-0001-8008-8249,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,PacBio Sequel II,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A DNA sequencer built upon single molecule real-time sequencing technology, optimized for generation of highly accurate (""HiFi"") long reads, and which is manufactured by the Pacific Biosciences corporation.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000079,sequencing run sample identifier,sample title|sample name,A sequencing run sample identifier is an alphanumeric identifier for a sample.  In bioinformatics processing this identifier is assigned to a sample in order to track it through the process of sequencing and analysis.,FALSE,,,,,,,,,,,,,,,,,,,,,GROUP: IRIDA Ontology (Emma),,,,,,,"Control1, Tank1, Froglet1|1,2,3, AX234, etc.",,,,PulseNet: SubmittedNumber|Illumina SampleSheet: Sample_ID,,,,,,,,,,,,,,,,,,,,,,,,,sample title|sample name,,,,GENEPIO:0000079,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,,,,,,,sequencing run sample identifier,,,,,Sequencing,,,,,,,,,,,,,,,,,,,,,,Sample Name,,,Derived from Illumina Sample Sheet specification:  http://support.illumina.com/content/dam/illumina-support/documents/documentation/system_documentation/miseq/miseq-sample-sheet-quick-ref-guide-15028392-j.pdf,,A sequencing run sample identifier is an alphanumeric identifier for a sample.  In bioinformatics processing this identifier is assigned to a sample in order to track it through the process of sequencing and analysis.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_38179,monocyclic heteroarene,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:38179,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,monocyclic heteroarene,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/OBA_2040161,age of onset of major depressive disorder,age major depressive disorder symptoms begin|age at onset of major depressive disorder,The age at which major depressive disorder manifestations first appear.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,age major depressive disorder symptoms begin|age at onset of major depressive disorder,,,,OBA:2040161,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age of onset of major depressive disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The age at which major depressive disorder manifestations first appear.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0013522,subdivision of tube,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0013522,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,subdivision of tube,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020448,piece of turkey organ,,A piece of a turkey organ.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020448,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of turkey organ,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A piece of a turkey organ.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001788,species of pathogen,,This is the species-level taxonomic name of an organism playing a pathogen role,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001788,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/NCBITaxon_species,,,,,,species of pathogen,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,This is the species-level taxonomic name of an organism playing a pathogen role,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490214,bottle,,A narrow-necked container typically made of glass or plastic that is used to store and transport liquids.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0214,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490214,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,bottle,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A narrow-necked container typically made of glass or plastic that is used to store and transport liquids.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001634,contig LG99,,The LG99 count is like the L99 count except that the length of the reference genome is used in the calculation rather than the sum of assembly contig lengths.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001634,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,contig LG99,,,,,Assembly QC,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,The LG99 count is like the L99 count except that the length of the reference genome is used in the calculation rather than the sum of assembly contig lengths.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0400103,DNA sequencer,,A DNA sequencer is an instrument that determines the order of deoxynucleotides in deoxyribonucleic acid sequences.,FALSE,,,,,,,,,,,,,,,,,,,,,MO,,,,,DNA sequencer,,"ABI 377 DNA Sequencer, ABI 310 DNA Sequencer",,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0400103,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DNA sequencer,,,,,,,,,,,,,,,,,,,,,,,,,,,,Trish Whetzel,,,,A DNA sequencer is an instrument that determines the order of deoxynucleotides in deoxyribonucleic acid sequences.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_03501256,sheet of paper,paper sheet|paper,A paper product which is a thin sheet material made of processed cellulose fibres.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,paper sheet|paper,,,,ENVO:03501256,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,sheet of paper,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A paper product which is a thin sheet material made of processed cellulose fibres.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100632,date field,date column,"A data field which describes the particular day, month and/or year an event has happened or will happen.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,(2026-02-28) Under review for deprecation.,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,date column,date slot,,,,GENEPIO:0100632,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788,2022-12-22T00:55:53.808Z,,,,,,,,,,,,,,,,,,,date field,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A data field which describes the particular day, month and/or year an event has happened or will happen.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490123,"plastic tray or pan, aluminum foil cover or wrapping",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490123,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"plastic tray or pan, aluminum foil cover or wrapping",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0321,Finnish,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0321,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Finnish,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0322,Finnish founder,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0322,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Finnish founder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0324,Ashkenazi Jew,Ashkenazi Jewish,Individuals who self-identify or are reported by authors as belonging to a Jewish diaspora population with an admixture of European and Middle Eastern ancestry,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Ashkenazi Jewish,,,,HANCESTRO:0324,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Ashkenazi Jew,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Individuals who self-identify or are reported by authors as belonging to a Jewish diaspora population with an admixture of European and Middle Eastern ancestry,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0323,Dutch founder,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0323,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Dutch founder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0320,Dutch,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0320,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Dutch,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0001488,ankle joint,talotibial joint|hock joint|hock|gambrel,A joint that connects the hindlimb autopod and zeugopod skeletons.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:AnkleJoint|Wikipedia:Ankle|UMLS:C0003087|SCTID:182212002|NCIT:C32078|MESH:D000843|MA:0000463|GAID:257|FMA:35195|EMAPA:35126|BTO:0004706,,,,,,,,,,,,,,,,,,,,,,,,,,talotibial joint|hock joint|hock|gambrel,,,UBERON:0001488,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,ankle joint,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A joint that connects the hindlimb autopod and zeugopod skeletons.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490329,rubber container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0329,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490329,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,rubber container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_108619,Salmonella enterica subsp. enterica serovar Newport,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,Salmonella enterica subsp. enterica serovar Newport,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:108619,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Salmonella enterica subsp. enterica serovar Newport,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C16729,Infant Mortality,Infant Mortality Total|Infant Mortality|Infant Death,Any disease or condition resulting in postnatal death before age 1 yr. (NCI),FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Infant Mortality Total|Infant Mortality|Infant Death,,,,NCIT:C16729,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Infant Mortality,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any disease or condition resulting in postnatal death before age 1 yr. (NCI),,,,,,,,
http://www.ebi.ac.uk/efo/EFO_0004352,mortality,mortality rate|mortality measurement,Quantification of the number of deaths in a population.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SNOMEDCT:409651001|NCIt:C16880|MESH:Q000401|MESH:D009026,,,,,,,,,,,,,,,,,,,,,,,,,mortality rate|mortality measurement,,,,efo:EFO_0004352,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,mortality,,,,,,,,,,,,,,,,,,,,,,,,,,,,Dani Welter,,,,Quantification of the number of deaths in a population.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100569,sequence contaminated datum,,"A data item that describes sequence data that contains reads from unintended targets (e.g. other organisms, other samples) due to contamination so that it does not faithfully represent the genetic information from the biological source.",FALSE,,,,,,,sequence contaminated,,,,,,,,,,,,,,,,,,,,,,,,ready for release,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100569,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-1107-9135,2023-01-23T00:42:19.315Z,,,,,,,,,,,,,,,,,,,sequence contaminated datum,,,,,,,,,,,,,,,,,,,,,,The PHA4GE QC Contextual Data Tags Specification: https://github.com/pha4ge/contextual-data-qc-tags,,,,,,,,,,"A data item that describes sequence data that contains reads from unintended targets (e.g. other organisms, other samples) due to contamination so that it does not faithfully represent the genetic information from the biological source.",,,,,,,,
http://purl.obolibrary.org/obo/PATO_0040049,male with DSD,intersex,A biological sex quality inhering in an individual or a population who are otherwise male of a non-hermaphroditic species who has ambiguous or atypical congenital development of the reproductive system.,FALSE,,,,,,,,,,,,,,"The term intersex is popular in use, but may be considered offensive when applied to humans. DSD can be expanded multiple ways to 'disorders/differences of sexual development/differentiation'.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,intersex,"male, DSD|male with disorder of sexual development|male with differences of sexual differentiation",,,,PATO:0040049,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/pato.owl,,,,,,,,,male with DSD,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A biological sex quality inhering in an individual or a population who are otherwise male of a non-hermaphroditic species who has ambiguous or atypical congenital development of the reproductive system.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490154,paperboard container with window,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0154,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490154,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,paperboard container with window,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02010187,piece of animal breast (with skin),,A piece of animal breast that contains skin.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02010187,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of animal breast (with skin),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A piece of animal breast that contains skin.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03480047,packed in vinegar with sugar and salt,,"A mixture of vinegar, sugar, and salt which are used as a packing medium for food material.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=K0047,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03480047,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,packed in vinegar with sugar and salt,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A mixture of vinegar, sugar, and salt which are used as a packing medium for food material.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03440018,partially heat-treated,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=F0018,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03440018,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,partially heat-treated,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100603,reference database name,,A data item which is an identifier of a reference bioinformatics database.,FALSE,,,,,,,,,,,,,,,,,,,,,http://edamontology.org/data_1048,,,,See editor note of http://purl.obolibrary.org/obo/IAO_0000650,reference database name,,"I used the NCBI reference sequence ""RefSeq"" database as a reference database for the identification and characterization of novel prokaryote sequences.",,,ready for release,http://purl.obolibrary.org/obo/OBI_0002883,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100603,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,reference database name,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-1107-9135,,,https://github.com/obi-ontology/obi/issues/1579,A data item which is an identifier of a reference bioinformatics database.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_29705,Valnemulin,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:29705,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,Valnemulin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/PR_000000001,protein,,"An amino acid chain that is produced de novo by ribosome-mediated translation of a genetically-encoded mRNA, and any derivatives thereof.|An amino acid chain that is canonically produced de novo by ribosome-mediated translation of a genetically-encoded mRNA, and any derivatives thereof.",FALSE,,,,,,,,,,,,,,"Note that the definition allows for experimentally-manipulated genes, and allows for artifically-produced derivatives that mimic those found naturally. Note also that the definition excludes protein complexes, which some also consider a protein. Those who wish to refer to a class representing both senses of the word are directed to PR:000064867 (""protein-containing molecular entity""). Proteins (in the sense defined here) that descended from a common ancestor can be classified into families and superfamilies composed of products of evolutionarily-related genes. The domain architecture of a protein is described by the order of its constituent domains. Proteins with the same domains in the same order are defined as homeomorphic [PRO:WCB).",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PR:000000001,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/pr.owl|http://purl.obolibrary.org/obo/cob.owl,,,,,,,,,protein,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An amino acid chain that is produced de novo by ribosome-mediated translation of a genetically-encoded mRNA, and any derivatives thereof.|An amino acid chain that is canonically produced de novo by ribosome-mediated translation of a genetically-encoded mRNA, and any derivatives thereof.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490126,plastic tray or pan,,A flat plastic container with raised edges that is used to carry things.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0126,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490126,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,plastic tray or pan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A flat plastic container with raised edges that is used to carry things.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001039,tuberculosis treatment drug,,A tuberculosis treatment antibiotic is an antibiotic used in the treatment of tuberculosis.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001039,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,tuberculosis treatment drug,,,,,,,,,,,,,,,,,,,,,,"“Treatment of Tuberculosis Guidelines”, WHO, Geneva, 2010, 30 www.who.int/tb/ - See more at: http://www.tbfacts.org/tb-drugs/#sthash.nibuzCLV.dpuf",,,,,,Damion Dooley,,,,A tuberculosis treatment antibiotic is an antibiotic used in the treatment of tuberculosis.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001863,longitude specification (ISO 6709),,A decimal longitude measurement in degrees in conformance with the ISO 6709 standard.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,http://purl.obolibrary.org/obo/UO_0000185,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001863,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,longitude specification (ISO 6709),,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/OBI_0001621,,,,Damion Dooley,,,,A decimal longitude measurement in degrees in conformance with the ISO 6709 standard.,,,,,,,"/^(:<long>[-W+E])?(:<degree>(1[0-7]|[1-9])?[0-9])(:<decimal>\.\d{1,6})?)$/, $long$degree.$decimal
/^(:<long>[-W+E])?(:<degree>180(:<decimal>\.0{1,6})?)$,$long$degree.$decimal",
http://purl.obolibrary.org/obo/NCBITaxon_9963,Caprinae,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,Caprinae,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:9963,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Caprinae,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001783,travel destination,,A travel destination is a destination city (or populated place of some scale) which a given human has travelled to on a particular trip.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001783,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,travel destination,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A travel destination is a destination city (or populated place of some scale) which a given human has travelled to on a particular trip.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0003581,Adult onset,Symptoms begin in adulthood|Onset in early adulthood|Onset in adulthood,"Onset of disease manifestations in adulthood, defined here as at the age of 16 years or later.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C1853562,,,,,,,,,,,,,,,,,,,,,,,HP:0003669|HP:0003662|HP:0003627|HP:0003598|HP:0003585,,Symptoms begin in adulthood|Onset in early adulthood|Onset in adulthood,,,,HP:0003581,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,Adult onset,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Onset of disease manifestations in adulthood, defined here as at the age of 16 years or later.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C25294,Laboratory Procedure,laboratory_test|laboratory test|lab_exam|lab exam|Tests|Test|Laboratory Test|Laboratory Procedure|Lab Tests|Lab Test|Clinical Laboratory Tests,"Any procedure that involves testing or manipulating a sample of blood, urine, or other body substance in a laboratory setting.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,laboratory_test|laboratory test|lab_exam|lab exam|Tests|Test|Laboratory Test|Laboratory Procedure|Lab Tests|Lab Test|Clinical Laboratory Tests,,,,NCIT:C25294,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Laboratory Procedure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Any procedure that involves testing or manipulating a sample of blood, urine, or other body substance in a laboratory setting.",,,,,,,,
http://semanticscience.org/resource/SIO_000136,description,,A description is language entity in which elements of a language (formal or natural) are used to characterize an entity.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,resource:SIO_000136,,,,,,,,,,,,,,,,,,,,,,,,http://semanticscience.org/ontology/sio.owl,,,,,,,,,description,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A description is language entity in which elements of a language (formal or natural) are used to characterize an entity.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_46895,lipopeptide,,A compound consisting of a peptide with attached lipid.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:46895,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,lipopeptide,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A compound consisting of a peptide with attached lipid.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_33838,nucleoside,,"An <em>N</em>-glycosyl compound that has both a nucleobase, normally adenine, guanine, xanthine, thymine, cytosine or uracil, and either a ribose or deoxyribose as functional parents.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:7647|CHEBI:25611|CHEBI:13661,,,,,,CHEBI:33838,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,nucleoside,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An <em>N</em>-glycosyl compound that has both a nucleobase, normally adenine, guanine, xanthine, thymine, cytosine or uracil, and either a ribose or deoxyribose as functional parents.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470150,sous vide cooking,,"Sous-vide, French for ""under vacuum"", is a method of cooking that is intended to maintain the integrity of ingredients by heating them for an extended period of time in vacuum sealed plastic pouches at relatively low temperatures. Food is cooked for a long time, sometimes well over 24 hours. Unlike cooking in a slow cooker, sous-vide cooking uses airtight plastic bags placed in hot water well below boiling point (usually around 60°C or 140°F).",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0150,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470150,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,sous vide cooking,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Sous-vide, French for ""under vacuum"", is a method of cooking that is intended to maintain the integrity of ingredients by heating them for an extended period of time in vacuum sealed plastic pouches at relatively low temperatures. Food is cooked for a long time, sometimes well over 24 hours. Unlike cooking in a slow cooker, sous-vide cooking uses airtight plastic bags placed in hot water well below boiling point (usually around 60°C or 140°F).",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001666,INSDC standard,,"The International Nucleotide Sequence Database Collaboration (INSDC) is a long-standing foundational initiative that operates between DDBJ, EMBL-EBI and NCBI. INSDC covers the spectrum of data raw reads, though alignments and assemblies to functional annotation, enriched with contextual information relating to samples and experimental configurations.",FALSE,,,,,,,International Nucleotide Database Collaboration standard,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000120,INSDC,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001666,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,INSDC standard,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"The International Nucleotide Sequence Database Collaboration (INSDC) is a long-standing foundational initiative that operates between DDBJ, EMBL-EBI and NCBI. INSDC covers the spectrum of data raw reads, though alignments and assemblies to functional annotation, enriched with contextual information relating to samples and experimental configurations.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102287,Helicos sequencing instrument model,,"A DNA sequencer manufactured by Helicos which uses glass flow cells and no amplification step. A sequencing run, generates approximately 1,000,000,000 usable reads with a median read length of about 35 nt.",FALSE,,,,,,,,,,,,,,,,,,,,,https://pmc.ncbi.nlm.nih.gov/articles/PMC2954431/,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102287,,,,,,,,,,,,,https://orcid.org/0000-0002-7654-6902|https://orcid.org/0000-0001-8008-8249,2026-03-30T14:26:04.627Z,,,,,,,,,,,,,,,,,,,Helicos sequencing instrument model,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A DNA sequencer manufactured by Helicos which uses glass flow cells and no amplification step. A sequencing run, generates approximately 1,000,000,000 usable reads with a median read length of about 35 nt.",,,,,,,,
http://purl.obolibrary.org/obo/ENVO_02000058,cloth,,"A textile comprised of a pliable material made usually by weaving, felting, or knitting natural or synthetic fibers and filaments.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Cloth,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:02000058,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,cloth,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A textile comprised of a pliable material made usually by weaving, felting, or knitting natural or synthetic fibers and filaments.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00004486,pork sub-primal cut,,A smaller cut of meat that is obtained from the larger primal cut of a pork.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00004486,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pork sub-primal cut,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A smaller cut of meat that is obtained from the larger primal cut of a pork.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02010320,"animal chop (boneless, raw)",,A raw and boneless animal chop.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02010320,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"animal chop (boneless, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw and boneless animal chop.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0410280,Pediatric onset,Paediatric onset|Onset before adulthood,"Onset of disease manifestations before adulthood, defined here as before the age of 16 years, but excluding neonatal or congenital onset.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Paediatric onset|Onset before adulthood,,,,HP:0410280,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,Pediatric onset,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Onset of disease manifestations before adulthood, defined here as before the age of 16 years, but excluding neonatal or congenital onset.",,,,,,,,
http://purl.obolibrary.org/obo/HP_0410281,Dyspepsia,Indigestion,"A heterogeneous group of symptoms that are localized in the epigastric region. Typical dyspeptic symptoms include postprandial fullness, early satiation, epigastric pain and epigastric burning, but other upper gastrointestinal symptoms such as nausea, belching or abdominal bloating often occur.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Indigestion,,,,HP:0410281,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Dyspepsia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A heterogeneous group of symptoms that are localized in the epigastric region. Typical dyspeptic symptoms include postprandial fullness, early satiation, epigastric pain and epigastric burning, but other upper gastrointestinal symptoms such as nausea, belching or abdominal bloating often occur.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510257,calcium and osteoporosis related claim,,US FDA approved language lacking for the moment.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0257,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510257,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,calcium and osteoporosis related claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,US FDA approved language lacking for the moment.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490130,glass container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0130,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490130,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,glass container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_31810,fleroxacin,,"A fluoroquinolone antibiotic that is 4-oxo-1,4-dihydroquinoline which is substituted at positions 1, 3, 6, 7 and 8 by 2-fluoroethyl, carboxy, fluoro, 4-methylpiperazin-1-yl and fluoro groups, respectively. It is active against many Gram-positive and Gram-negative bacteria.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:31810,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,fleroxacin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A fluoroquinolone antibiotic that is 4-oxo-1,4-dihydroquinoline which is substituted at positions 1, 3, 6, 7 and 8 by 2-fluoroethyl, carboxy, fluoro, 4-methylpiperazin-1-yl and fluoro groups, respectively. It is active against many Gram-positive and Gram-negative bacteria.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001415,most recent travel return date,most recent travel return date,A date field which describes the date of an individual's most recent return to some residence from a journey originating at that residence.,FALSE,,,,,,,PCDS:most_recent_travel_return_date,,,,,,,"PCDS: Provide the travel return date. Provide the date in ISO 8601 format, i.e. 'YYYY-MM-DD'.",,,,,,,,,,,,,,PCDS: 2020-04-26,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,most recent travel return date,most recent travel return date slot,,,,GENEPIO:0001415,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,most recent travel return date,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A date field which describes the date of an individual's most recent return to some residence from a journey originating at that residence.,,PCDS: The date of a person's most recent return to some residence from a journey originating at that residence.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100511,AMR testing by,antimicrobial resistance testing by|AMR_testing_by|AMR testing by,A data field which describes the name of the organization that performed the antimicrobial resistance (AMR) testing.,FALSE,,,,,,,PCDS:amr_testing_by,,,,,,,"PCDS: Provide the full name of the agency, organization, or institution that performed the AMR testing. If applicable, include the organization’s abbreviation in round brackets () and an ontology identifier in square brackets []. If the information is unknown or cannot be provided, leave blank or provide a null value.",,,,,,,,,,,,,,PCDS: Canadian Food Inspection Agency (CFIA) [GENEPIO:0100552],,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,antimicrobial resistance testing by|AMR_testing_by|AMR testing by,antimicrobial resistance testing by slot|antimicrobial resistance testing by field|AMR testing by slot,,,,GENEPIO:0100511,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-12-22T00:55:53.808Z,,,,,,,,,,,,,,,,,,,AMR testing by,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the name of the organization that performed the antimicrobial resistance (AMR) testing.,,PCDS: The name of the organization that performed the antimicrobial resistance testing.,,,,,,
http://purl.obolibrary.org/obo/IDO_0000444,protective resistance,,"A disposition that inheres in a material entity in virtue of the fact that the entity has a part (e.g. a gene product), which itself has a disposition to mitigate damage to the entity.",FALSE,,,,,,,,,,,,,,The disposition is realized in a process that mitigates damage to the bearer and has the part as a participant.|Examples include the following:  CCR5 mutations protect T cells from HIV invasion.  A tumor cell's resistance to chemotherapy protects the cell from damage by the drug (although this harms the patient).  An insect's resistance to insecticide protects it from the insecticide.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,IDO:0000444,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ido.owl,,,,,,,,,protective resistance,,,,,,,,,,,,,,,,,,,,,,,,,,,,Lindsay Cowell|Alexander Diehl|Albert Goldfain,,,,"A disposition that inheres in a material entity in virtue of the fact that the entity has a part (e.g. a gene product), which itself has a disposition to mitigate damage to the entity.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001991,WCS strategy,,Random sequencing of a whole chromosome or other replicon isolated from a genome.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI SRA: WCS,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001991,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WCS strategy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Random sequencing of a whole chromosome or other replicon isolated from a genome.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100796,total suspended solids tss measurement method,total suspended solids (TSS) measurement method,An environmental data field which describes the method used to measure total suspended solids (TSS).,FALSE,,,,,,,PCDS:total_suspended_solids_tss_measurement_method,,,,,,,PCDS: Provide the name of the procedure or technology used to measure TSS.,,,,,,,,,,,,,,"PCDS: Vacuum filter through a 2-micron filter, then oven-dried and weighed sample",,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,total suspended solids (TSS) measurement method,total suspended solids (TSS) measurement method slot,,,,GENEPIO:0100796,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,total suspended solids tss measurement method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the method used to measure total suspended solids (TSS).,,PCDS: The method used to measure total suspended solids (TSS).,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490156,paperboard container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0156,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490156,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,paperboard container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0037615,pararectal lymph node,rectal lymph node|perirectal lymph node|pararectal node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:16621,,,,,,,,,,,,,,,,,,,,,,,,,rectal lymph node|perirectal lymph node|pararectal node,,,,UBERON:0037615,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,pararectal lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0037614,appendicular lymph node,appendicular node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:16620,,,,,,,,,,,,,,,,,,,,,,,,,appendicular node,,,,UBERON:0037614,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,appendicular lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_5686,heterocyclic compound,,A cyclic compound having as ring members atoms of at least two different elements.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:5686,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,heterocyclic compound,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A cyclic compound having as ring members atoms of at least two different elements.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102275,prior measles infection status,,A data field which describes the absence or presence of a prior measles infection.,FALSE,,,,,,,PCDS:prior_measles_infection,,,,,,,"PCDS: If known, provide information about whether the individual had a previous Measles infection. Select a value from the pick list.",,,,,,,,,,,,,,PCDS: Prior infection,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102275,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2026-04-09T18:02:29.914Z,,,,,,,,,,,,,,,,,,,prior measles infection status,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the absence or presence of a prior measles infection.,,PCDS: The absence or presence of a prior Measles infection.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001275,human to human exposure process,,A process in which one or more humans may be exposed to one or more contagious human infectious disease carriers.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001275,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,human to human exposure process,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A process in which one or more humans may be exposed to one or more contagious human infectious disease carriers.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_33318,main group element atom,,An atom belonging to one of the main groups (found in the s- and p- blocks) of the periodic table.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:33318,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,main group element atom,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An atom belonging to one of the main groups (found in the s- and p- blocks) of the periodic table.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002106,draft sequence repository data - food specimen,,"This specification offers food source, product type, packaging and processing attributes relevant to describing a food specimen.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002106,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,draft sequence repository data - food specimen,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"This specification offers food source, product type, packaging and processing attributes relevant to describing a food specimen.",,,"order:
GENEPIO:0001533 # food specimen type
FOODON:03450002 # food cooking method
FOODON:03440011 # extent of heat treatment
FOODON:03430113 # physical state, shape or form
FOODON:03470107 # food preservation method
FOODON:03490100 # container or wrapping
FOODON:03480020 # food packing medium
FOODON:03500010 # food contact surface
GENEPIO:0000139 # food cultural origin
FOODON:03460111 # treatment applied to food",,,,,
http://purl.obolibrary.org/obo/FOODON_03510162,label claim separate from food name,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0162,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510162,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,label claim separate from food name,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_24835,inorganic molecular entity,,A molecular entity that contains no carbon.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:24835,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,inorganic molecular entity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A molecular entity that contains no carbon.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0012647,Abnormal inflammatory response,Abnormal inflammatory response,"Any anomaly of the inflammatory response, a response to injury or infection characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4022805,,,,,,,,,,,,,,,,,,,,,,,,,Abnormal inflammatory response,,,,HP:0012647,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal inflammatory response,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Any anomaly of the inflammatory response, a response to injury or infection characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages.",,,,,,,,
http://purl.obolibrary.org/obo/HP_0012649,Increased inflammatory response,,A abnormal increase in the inflammatory response to injury or infection.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4022803,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0012649,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Increased inflammatory response,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A abnormal increase in the inflammatory response to injury or infection.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00004759,Region (New Zealand),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00004759,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Region (New Zealand),http://purl.obolibrary.org/obo/GAZ_00000469,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001104,metagenome project,,Metagenome: sequence analysis of environmental samples,FALSE,,,,,,,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/books/NBK54364/,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001104,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,metagenome project,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,Metagenome: sequence analysis of environmental samples,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02010307,animal primal cut (raw),,A raw animal primal cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02010307,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,animal primal cut (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw animal primal cut.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0617,Rarámuri,Tarahumara,Individuals who self-identify or are reported by authors as belonging to a group of indigenous people of the Americas living in the state of Chihuahua in Mexico,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Tarahumara,,,,HANCESTRO:0617,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Rarámuri,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Individuals who self-identify or are reported by authors as belonging to a group of indigenous people of the Americas living in the state of Chihuahua in Mexico,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0610,Indigenous in North America,Native peoples|Native American|First peoples|First Nations|American Indian|Aboriginal people in North America,"Includes indigenous individuals of North and Central America, descended from the original human migration into the Americas from Siberia.",FALSE,,,,,,,,,,,,,,"Synonyms include historical and contemporary terms in use in parts of Canada, Alaska and USA by some Indigenous populations, local and national governmental institutions",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Native peoples|Native American|First peoples|First Nations|American Indian|Aboriginal people in North America,,,,HANCESTRO:0610,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Indigenous in North America,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Includes indigenous individuals of North and Central America, descended from the original human migration into the Americas from Siberia.",,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0615,Zapoteco,,"Individuals who self-identify or are reported by authors as belonging to the Zapotec ethnolinguistic group of indigenous people of Mexico. The Zapotec population is concentrated in the southern state of Oaxaca, but Zapotec communities also exist in neighboring states",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0615,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Zapoteco,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Individuals who self-identify or are reported by authors as belonging to the Zapotec ethnolinguistic group of indigenous people of Mexico. The Zapotec population is concentrated in the southern state of Oaxaca, but Zapotec communities also exist in neighboring states",,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0616,Mazateco,,"Individuals who self-identify or are reported by authors as belonging to the Mazatecan ethnolinguistic group of indigenous peoples in the area known as the Sierra Mazateca, which is in the northern part of the state of Oaxaca in southern Mexico, as well as in adjacent areas of the states of Puebla and Veracruz",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0616,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Mazateco,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Individuals who self-identify or are reported by authors as belonging to the Mazatecan ethnolinguistic group of indigenous peoples in the area known as the Sierra Mazateca, which is in the northern part of the state of Oaxaca in southern Mexico, as well as in adjacent areas of the states of Puebla and Veracruz",,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0613,Otomi,,Individuals who self-identify or are reported by authors as belonging to a group of indigenous people of Mexico inhabiting the central Mexican Plateau (Altiplano) region.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0613,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Otomi,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Individuals who self-identify or are reported by authors as belonging to a group of indigenous people of Mexico inhabiting the central Mexican Plateau (Altiplano) region.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0614,Maya,,Individuals who self-identify or are reported by authors as belonging to the Mayan ethnolinguistic group of indigenous peoples of Mesoamerica.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0614,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Maya,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Individuals who self-identify or are reported by authors as belonging to the Mayan ethnolinguistic group of indigenous peoples of Mesoamerica.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0611,Indigenous in South America,pueblos originarios|pueblos indígenas|nativos|indo|Indígena,"Includes indigenous individuals of Central and South America, descended from the original human migration into the Americas from Siberia.",FALSE,,,,,,,,,,,,,,"Synonyms include terms typically refers to Indigenous Americans in Mexico, Central and South Lain America and is the preferred general term by these groups. Indio is an outdated and possibly offensive term that is outdated and should be avoided.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,pueblos originarios|pueblos indígenas|nativos|indo|Indígena,,,,HANCESTRO:0611,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Indigenous in South America,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Includes indigenous individuals of Central and South America, descended from the original human migration into the Americas from Siberia.",,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0619,Mixteco,Mixtec,Individuals who self-identify or are reported by authors as belonging to indigenous Mesoamerican peoples of Mexico inhabiting the region known as La Mixteca of Oaxaca and Puebla as well as La Montaña Region and Costa Chica Regions of the state of Guerrero,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Mixtec,,,,HANCESTRO:0619,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Mixteco,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Individuals who self-identify or are reported by authors as belonging to indigenous Mesoamerican peoples of Mexico inhabiting the region known as La Mixteca of Oaxaca and Puebla as well as La Montaña Region and Costa Chica Regions of the state of Guerrero,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0618,Nahua,,"Individuals who self-identify or are reported by authors as belonging to a group of the indigenous people of Mexico, El Salvador, Guatemala, Honduras, and Nicaragua",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0618,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Nahua,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Individuals who self-identify or are reported by authors as belonging to a group of the indigenous people of Mexico, El Salvador, Guatemala, Honduras, and Nicaragua",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100832,read mapping software name,read mapping software name,A data field which describes the name of the software used to map sequence reads to a reference genome or set of reference genes.,FALSE,,,,,,,PCDS:read_mapping_software_name,,,,,,,PCDS: Provide the name of the read mapping software.,,,,,,,,,,,,,,"PCDS: Bowtie2, BWA-MEM, TopHat",,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,read mapping software name,read mapping software name slot|read alignment software name slot|read alignment software name field,,,,GENEPIO:0100832,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,read mapping software name,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the name of the software used to map sequence reads to a reference genome or set of reference genes.,,PCDS: The name of the software used to map sequence reads to a reference genome or set of reference genes.,,,,,,
http://purl.obolibrary.org/obo/CHEBI_16670,peptide,,"Amide derived from two or more amino carboxylic acid molecules (the same or different) by formation of a covalent bond from the carbonyl carbon of one to the nitrogen atom of another with formal loss of water. The term is usually applied to structures formed from α-amino acids, but it includes those derived from any amino carboxylic acid. X = OH, OR, NH2, NHR, etc.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:7990|CHEBI:25906|CHEBI:14753,,,,,,CHEBI:16670,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,peptide,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Amide derived from two or more amino carboxylic acid molecules (the same or different) by formation of a covalent bond from the carbonyl carbon of one to the nitrogen atom of another with formal loss of water. The term is usually applied to structures formed from α-amino acids, but it includes those derived from any amino carboxylic acid. X = OH, OR, NH2, NHR, etc.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_3491,cefonicid,,"A cephalosporin bearing {[1-(sulfomethyl)-1<em>H</em>-tetrazol-5-yl]sulfanyl}methyl and (<i>R</i>)-2-hydroxy-2-phenylacetamido groups at positions 3 and 7, respectively, of the cephem skeleton.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:3491,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,cefonicid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A cephalosporin bearing {[1-(sulfomethyl)-1<em>H</em>-tetrazol-5-yl]sulfanyl}methyl and (<i>R</i>)-2-hydroxy-2-phenylacetamido groups at positions 3 and 7, respectively, of the cephem skeleton.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_3493,cefoperazone,,A semi-synthetic parenteral cephalosporin with a tetrazolyl moiety that confers beta-lactamase resistance.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:258120,,,,,,CHEBI:3493,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,cefoperazone,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A semi-synthetic parenteral cephalosporin with a tetrazolyl moiety that confers beta-lactamase resistance.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_530,eyelid disease,,An adnexa disease that is located_in the eyelid.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:530,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,eyelid disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An adnexa disease that is located_in the eyelid.,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000563,Lebu,,A Wolof population with a population size of 210000,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000563,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Lebu|Lebu,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Wolof population with a population size of 210000,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000560,Papel,,A Western African population with a population size of 140000,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000560,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Papel|Papel,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Western African population with a population size of 140000,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000564,Nuna,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000564,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Nuna|Nuna,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000562,Temne,,"A Western African population with a population size of 2,225 Millions",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000562,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Temne|Temne,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A Western African population with a population size of 2,225 Millions",,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000561,Sherbro,,A Western African population with a population size of 134606,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000561,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Sherbro|Sherbro,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Western African population with a population size of 134606,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002083,draft sequence repository contextual data standard,,"This draft specification provides a collection of fields related to the contextual data of a specimen, its genomic sequencing, and its pathogenic epidemiology.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002083,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,draft sequence repository contextual data standard,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"This draft specification provides a collection of fields related to the contextual data of a specimen, its genomic sequencing, and its pathogenic epidemiology.",,,"order:
GENEPIO:0002082 # specimen related organization
GENEPIO:0002081 # specimen collection
GENEPIO:0002086 # geographic location
GENEPIO:0002084 # isolate
GENEPIO:0002087 # isolate history
GENEPIO:0002106 # food specimen
GENEPIO:0002088 # antibiogram
GENEPIO:0002085 # sequencing
GENEPIO:0002090 # sequencing QC
GENEPIO:0002089 # virulence
GENEPIO:0002092 # submission to EBI
GENEPIO:0002091 # submission to NCBI/DDBJ|dateFormat:ISO 8601",,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001932,SOLiD System 2.0,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI SRA: AB SOLiD System 2.0,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001932,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SOLiD System 2.0,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03450010,food toasting,,"Cooking with direct heat until the surface of the food is browned, usually associated with bread or sandwiches.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=G0010,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03450010,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food toasting,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Cooking with direct heat until the surface of the food is browned, usually associated with bread or sandwiches.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001802,document citation identifier,,Note: REPLACE WITH Citation: SIO_000174  ????,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001802,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,document citation identifier,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Note: REPLACE WITH Citation: SIO_000174  ????,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0005156,reproductive structure,reproductive system structure|reproductive system element,Any anatomical structure that is part of the reproductive system.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,reproductive system structure|reproductive system element,,,,UBERON:0005156,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,reproductive structure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any anatomical structure that is part of the reproductive system.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530292,free-range food animal rearing,,"A method of farming husbandry where the animals, for at least part of the day, can roam freely outdoors, rather than being confined in an enclosure for 24 hours each day. This term can be applied to egg, dairy, poultry, and meat production.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0292,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530292,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,free-range food animal rearing,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A method of farming husbandry where the animals, for at least part of the day, can roam freely outdoors, rather than being confined in an enclosure for 24 hours each day. This term can be applied to egg, dairy, poultry, and meat production.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100034,saline gargle,mouth rinse and gargle,"A collecting specimen from organism process in which a salt water solution is taken into the oral cavity, rinsed around, and gargled before being deposited into an external collection device.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,mouth rinse and gargle,,,,GENEPIO:0100034,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,saline gargle,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A collecting specimen from organism process in which a salt water solution is taken into the oral cavity, rinsed around, and gargled before being deposited into an external collection device.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001870,area calculation,,"An area calculation datum is a functional mapping of a two dimensional surface area (can be anything from an abstract polygon, to a postal code or country) to a 1 dimensional scalar.  The original surface area may be curved, e.g. spheroid.  The surface area can also be described using only one input - for example the radius scalar of a polar coordinate plane described by pi*r^2.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0001908,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001870,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,area calculation,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"An area calculation datum is a functional mapping of a two dimensional surface area (can be anything from an abstract polygon, to a postal code or country) to a 1 dimensional scalar.  The original surface area may be curved, e.g. spheroid.  The surface area can also be described using only one input - for example the radius scalar of a polar coordinate plane described by pi*r^2.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490400,polyethylene (low density) - nylon 11 container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0400,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490400,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,polyethylene (low density) - nylon 11 container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001432,awaiting ontology review,,"This class is a temporary holding bin for items that need a class hierarchy home, definition, and/or subclass items. Some classes have subclasses that are currently disjoint in other ontologies like ENVO, so awaiting resolution on such issues.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001432,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,awaiting ontology review,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"This class is a temporary holding bin for items that need a class hierarchy home, definition, and/or subclass items. Some classes have subclasses that are currently disjoint in other ontologies like ENVO, so awaiting resolution on such issues.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_139592,tertiary alpha-hydroxy ketone,,An α-hydroxy ketone in which the carbonyl group and the hydroxy group are linked by a carbon bearing two organyl groups.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:139592,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,tertiary alpha-hydroxy ketone,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An α-hydroxy ketone in which the carbonyl group and the hydroxy group are linked by a carbon bearing two organyl groups.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00001002,food product,,"Food material for humans and animals which is processed with the intention that it be consumable as a whole or added to other food products.|A substance, usually composed primarily of carbohydrates, fats, water and/or proteins, that can be eaten or drunk by an animal or human being for nutrition or pleasure.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00001002,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,foodon product type|food product,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"Food material for humans and animals which is processed with the intention that it be consumable as a whole or added to other food products.|A substance, usually composed primarily of carbohydrates, fats, water and/or proteins, that can be eaten or drunk by an animal or human being for nutrition or pleasure.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_2956,azlocillin,,"A semisynthetic penicillin having a 6β-{(2<i>R</i>)-2-[(2-oxoimidazolidine-1-carbonyl)amino]-2-phenylacetyl}amino side-group. It is an antibiotic used in treating infections caused by <em>Pseudomonas aeruginosa, Escherichia coli</em> and <em>Haemophilus influenzae</em>.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:63225,,,,,,CHEBI:2956,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,azlocillin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A semisynthetic penicillin having a 6β-{(2<i>R</i>)-2-[(2-oxoimidazolidine-1-carbonyl)amino]-2-phenylacetyl}amino side-group. It is an antibiotic used in treating infections caused by <em>Pseudomonas aeruginosa, Escherichia coli</em> and <em>Haemophilus influenzae</em>.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_2955,azithromycin,,A macrolide antibiotic useful for the treatment of bacterial infections.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:46596,,,,,,CHEBI:2955,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,azithromycin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A macrolide antibiotic useful for the treatment of bacterial infections.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0000077,Abnormality of the kidney,Renal anomaly|Renal anomalies|Abnormality of the kidney|Abnormal kidney,An abnormality of the kidney.,FALSE,,,,,,,,,,,,,,The kidney is a paired organ whose primary function is the production of urine.,,,,,,,,,,,,,,,,,,UMLS:C0266292|UMLS:C0022658|SNOMEDCT_US:90708001|SNOMEDCT_US:44513007,,,,,,,,,,,,,,,,,,,,,,,,,Renal anomaly|Renal anomalies|Abnormality of the kidney|Abnormal kidney,,,,HP:0000077,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormality of the kidney,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An abnormality of the kidney.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0000079,Abnormality of the urinary system,Urinary tract anomalies|Urinary tract abnormality|Urinary tract abnormalities,An abnormality of the urinary system.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4021821,,,,,,,,,,,,,,,,,,,,,,,,,Urinary tract anomalies|Urinary tract abnormality|Urinary tract abnormalities,,,,HP:0000079,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormality of the urinary system,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An abnormality of the urinary system.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C27557,Non-Neoplastic Lung Disorder,Non-neoplastic Pulmonary Diseases|Non-neoplastic Pulmonary Disease|Non-neoplastic Lung Disorders|Non-Neoplastic Pulmonary Disorder|Non-Neoplastic Lung Disorder,"A lung disorder not caused by a neoplasm. Representative examples include chronic obstructive pulmonary disease, atelectasis, lung infections, pulmonary fibrosis, and pneumoconiosis.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Non-neoplastic Pulmonary Diseases|Non-neoplastic Pulmonary Disease|Non-neoplastic Lung Disorders|Non-Neoplastic Pulmonary Disorder|Non-Neoplastic Lung Disorder,,,,NCIT:C27557,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Non-Neoplastic Lung Disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A lung disorder not caused by a neoplasm. Representative examples include chronic obstructive pulmonary disease, atelectasis, lung infections, pulmonary fibrosis, and pneumoconiosis.",,,,,,,,
http://purl.obolibrary.org/obo/OBA_2001024,age of onset of Huntington disease,age at onset of Huntington disease|age Huntington disease symptoms begin,The age at which Huntington disease manifestations first appear.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,age at onset of Huntington disease|age Huntington disease symptoms begin,,,,OBA:2001024,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age of onset of Huntington disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The age at which Huntington disease manifestations first appear.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000102,IRIDA case ID,,An IRIDA case ID is a tracking identifier for a case used in the IRIDA.ca software system.  It is used to cross-reference anonymized IDs.,FALSE,,,,,,,,,,,,,,,,,,,,,GROUP: IRIDA Ontology (Emma),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000102,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,IRIDA case ID,,,,,ID Tracker,,,,,,,,,,,,,,,,,,,,,,IRIDA ID,Damion Dooley,,ontology group,,An IRIDA case ID is a tracking identifier for a case used in the IRIDA.ca software system.  It is used to cross-reference anonymized IDs.,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_562,Escherichia coli,,,FALSE,,,,,,,Escherichia/Shigella coli|E. coli,,,,,,,,,,,,,,,,,,,Escherichia coli,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:562,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Escherichia coli,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001846,critical but stable health status,,"Damion Dooley's note: This is a contentious term.  AHA calls for it never to be used, since the common phrase ""critical but stable"" is misleading by the very nature of ""critical"".  The NHS however has it as one of its central terms.  The use of ""stable"" also points to a health trend, rather than a state. A separate ""health status trend datum"" has been set up to capture this.",FALSE,,,,,http://purl.obolibrary.org/obo/GENEPIO_0002228,,,,http://purl.obolibrary.org/obo/GENEPIO_0001842,,,,,"Damion Dooley's note: This is a contentious term.  AHA calls for it never to be used, since the common phrase ""critical but stable"" is misleading by the very nature of ""critical"".  The NHS however has it as one of its central terms.  The use of ""stable"" also points to a health trend, rather than a state. A separate ""health status trend datum"" has been set up to capture this.",,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001846,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,critical but stable health status,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ExO_0000057,inhalation,,The process of drawing in by breathing.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ExO:0000057,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ExO_0000057,,,,,,,,,inhalation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The process of drawing in by breathing.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00002030,aquatic biome,,A biome which is determined by a water body and which has ecological climax communities adapted to life in or on water.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,LTER:41,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00002030,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,aquatic biome,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A biome which is determined by a water body and which has ecological climax communities adapted to life in or on water.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00002718,"populated place, Norway",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00002718,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Norway",http://purl.obolibrary.org/obo/GAZ_00005851,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001977,clone strategy,,Genomic clone based (hierarchical) sequencing.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI SRA: CLONE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001977,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,clone strategy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Genomic clone based (hierarchical) sequencing.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020499,"turkey breast (skinless, boneless)",,A skinless and boneless turkey breast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020499,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"turkey breast (skinless, boneless)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A skinless and boneless turkey breast.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000087,number of reads passing filter,,"Raw data are filtered to remove any reads that do not meet the overall quality as measured by a chastity filter. The chastity of a base call is calculated as the ratio of the brightest intensity divided by the sum of the brightest and second brightest intensities.
Clusters passing filter are represented by PF in analysis reports. Clusters pass filter if no more than one base call in the first 25 cycles has a chastity of < 0.6.",FALSE,,,,,,,,,,,,,,,,,,,,,URI: http://support.illumina.com/sequencing/sequencing_instruments/miseq/questions.html,,,,,,,0.92,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000087,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,,,,,,,number of reads passing filter,,,,,Run QC,,,,,,,,,,,,,,,,,,,,,,Number of Reads Passing Filter,,,Output from MiSeq,,"Raw data are filtered to remove any reads that do not meet the overall quality as measured by a chastity filter. The chastity of a base call is calculated as the ratio of the brightest intensity divided by the sum of the brightest and second brightest intensities.
Clusters passing filter are represented by PF in analysis reports. Clusters pass filter if no more than one base call in the first 25 cycles has a chastity of < 0.6.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0008827,murine forestomach,stomach non-glandular region|forestomach,A distinct rodent non-glandular region of the stomach which is demarcated from the glandular stomach by the limiting ridge (margo plicatus).,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0033745|NCIT:C77956|MA:0001606|EMAPA:17627,,,,,,,,,,,,,,,,,,,,,,,,stomach non-glandular region|forestomach,,,,,UBERON:0008827,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,murine forestomach,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A distinct rodent non-glandular region of the stomach which is demarcated from the glandular stomach by the limiting ridge (margo plicatus).,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000017,micrometer,um|micron|micrometre,A length unit which is equal to one millionth of a meter or 10^[-6] m.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,um|micron|micrometre,,,,UO:0000017,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,micrometer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A length unit which is equal to one millionth of a meter or 10^[-6] m.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000016,millimeter,mm|millimetre,A length unit which is equal to one thousandth of a meter or 10^[-3] m.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,mm,,mm|millimetre,,,,UO:0000016,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,millimeter,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A length unit which is equal to one thousandth of a meter or 10^[-3] m.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000012,kelvin,K,A thermodynamic temperature unit which is equal to the fraction 1/273.16 of the thermodynamic temperature of the triple point of water.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,K,,,,UO:0000012,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,kelvin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A thermodynamic temperature unit which is equal to the fraction 1/273.16 of the thermodynamic temperature of the triple point of water.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000019,angstrom,Å,A length unit which is equal to 10 [-10] m.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Å,,,,UO:0000019,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,angstrom,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A length unit which is equal to 10 [-10] m.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000010,second,s,A time unit which is equal to the duration of 9 192 631 770 periods of the radiation corresponding to the transition between the two hyperfine levels of the ground state of the caesium 133 atom.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,s,,,,UO:0000010,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,second,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A time unit which is equal to the duration of 9 192 631 770 periods of the radiation corresponding to the transition between the two hyperfine levels of the ground state of the caesium 133 atom.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000015,centimeter,cm|centimetre,A length unit which is equal to one hundredth of a meter or 10^[-2] m.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,cm|centimetre,,,,UO:0000015,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,centimeter,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A length unit which is equal to one hundredth of a meter or 10^[-2] m.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000018,nanometer,nm|nanometre,A length unit which is equal to one thousandth of one millionth of a meter or 10^[-9] m.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,nm|nanometre,,,,UO:0000018,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,nanometer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A length unit which is equal to one thousandth of one millionth of a meter or 10^[-9] m.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_33672,heterobicyclic compound,,A bicyclic compound in which at least one of the rings contains at least one skeletal heteroatom.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:33672,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,heterobicyclic compound,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A bicyclic compound in which at least one of the rings contains at least one skeletal heteroatom.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000325,pork picnic (raw),,A raw pork picnic cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000325,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pork picnic (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw pork picnic cut.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0004905,articulation,joint,Anatomical structure that connects two or more adjacent skeletal elements or hardened body parts.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FBbt:00005811,,,,,,,,,,,,,,,,,,,,,,,,,,joint,,,UBERON:0004905,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,articulation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Anatomical structure that connects two or more adjacent skeletal elements or hardened body parts.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0004907,lower digestive tract,gut,The region of the digestive tract extending from the beginning of the intestines to the anus[GO - gut definition].,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:LowerGastrointestinalTract|Wikipedia:Alimentary_canal#Upper_gastrointestinal_tract|UMLS:C0226875|SCTID:279973004|NCIT:C33010|FMA:49179,,,,,,,,,,,,,,,,,,,,,,,,gut,lower gastrointestinal tract|lower GI tract,,,,UBERON:0004907,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,lower digestive tract,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The region of the digestive tract extending from the beginning of the intestines to the anus[GO - gut definition].,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0004906,ectodermal part of digestive tract,gut ectoderm|ectodermal gut,A portion of the gut that is derived from ectoderm.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,gut ectoderm|ectodermal gut,,,,UBERON:0004906,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,ectodermal part of digestive tract,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A portion of the gut that is derived from ectoderm.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0004908,upper digestive tract,upper gastrointestinal tract|upper GI tract,The region of the digestive tract extending from the mouth cavity through pharynx esophagus stomach and duodenum.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:UpperGastrointestinalTract|Wikipedia:Alimentary_canal#Upper_gastrointestinal_tract|UMLS:C0226874|SCTID:181244000|NCIT:C33837|FMA:49177,,,,,,,,,,,,,,,,,,,,,,,,,upper gastrointestinal tract|upper GI tract,,,,UBERON:0004908,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,upper digestive tract,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The region of the digestive tract extending from the mouth cavity through pharynx esophagus stomach and duodenum.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000408,environmental zone,,A site which has its extent determined by the presence or influence of one or more components of an environmental system or the processes occurring therein.,FALSE,,,,,,,,,,,,,,"Formerly, this class was an experimental class and a subclass of ""environmental feature"". It is now aligned to BFO. The class was not obsoleted as the core semantics maintained their stability through its transition.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01000408,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,envoPolar,,,,,,,,environmental zone,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A site which has its extent determined by the presence or influence of one or more components of an environmental system or the processes occurring therein.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03450009,cooked by popping,,"Cooking by agitating the food over a dry, high heat source, resulting in exploding.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=G0009,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03450009,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,cooked by popping,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Cooking by agitating the food over a dry, high heat source, resulting in exploding.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_22390,alpha-D-glucoside,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:22390,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,alpha-D-glucoside,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/IAO_0000028,symbol,,An information content entity that is a mark(s) or character(s) used as a conventional representation of another entity.,FALSE,,,,,,,,,,,,,,,,,,,,,based on Oxford English Dictionary,,,,"2014-03-31: We would like to have a deeper analysis of 'mark' and 'sign' in the future (see https://github.com/information-artifact-ontology/IAO/issues/154).|20091104, MC: this needs work and will most probably change",symbol,,,,,http://purl.obolibrary.org/obo/IAO_0000125,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,IAO:0000028,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/iao.owl,,,,,,,,,symbol,,,,,,,,,,,,,,,,,,,,,,,,,,,,PERSON: Jonathan Rees|PERSON: James A. Overton,,,,An information content entity that is a mark(s) or character(s) used as a conventional representation of another entity.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_23117,chlorine molecular entity,,A halogen molecular entity containing one or more atoms of chlorine.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:23117,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,chlorine molecular entity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A halogen molecular entity containing one or more atoms of chlorine.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0753,"Han Chinese in Beijing, China (1KGP)",Han Chinese|CHB,"A population made up of 112 samples from Han Chinese individuals recruited in Beijing, China as part of the 1000 Genomes Project. The population was assigned by the collecting project to the superpopulation East Asian.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Han Chinese|CHB,,,,HANCESTRO:0753,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,"Han Chinese in Beijing, China (1KGP)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A population made up of 112 samples from Han Chinese individuals recruited in Beijing, China as part of the 1000 Genomes Project. The population was assigned by the collecting project to the superpopulation East Asian.",,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0756,Han Chinese South (1KGP),Southern Han Chinese|CHS,A population made up of 171 samples from Han Chinese South individuals recruited in China as part of the 1000 Genomes Project. The population was assigned by the collecting project to the superpopulation East Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Southern Han Chinese|CHS,,,,HANCESTRO:0756,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Han Chinese South (1KGP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 171 samples from Han Chinese South individuals recruited in China as part of the 1000 Genomes Project. The population was assigned by the collecting project to the superpopulation East Asian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0752,"Chinese Dai in Xishuangbanna, China (1KGP)",Dai Chinese|CDX,"A population made up of 109 samples from Chinese Dai individuals recruited in Xishuangbanna, China as part of the 1000 Genomes Project. The population was assigned by the collecting project to the superpopulation East Asian.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Dai Chinese|CDX,,,,HANCESTRO:0752,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,"Chinese Dai in Xishuangbanna, China (1KGP)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A population made up of 109 samples from Chinese Dai individuals recruited in Xishuangbanna, China as part of the 1000 Genomes Project. The population was assigned by the collecting project to the superpopulation East Asian.",,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0757,"Adygei in Caucasus, Russia (HGDP)",Adygei,"A population made up of 15 samples from Adygei individuals recruited in Caucasus, Russia as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation European.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Adygei,,,,HANCESTRO:0757,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,"Adygei in Caucasus, Russia (HGDP)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A population made up of 15 samples from Adygei individuals recruited in Caucasus, Russia as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation European.",,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0751,Yi in China (SGDP),Yi,A population made up of 2 samples from Yi individuals recruited in China as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Yi,,,,HANCESTRO:0751,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Yi in China (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Yi individuals recruited in China as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0750,Xibo in China (SGDP),Xibo,A population made up of 2 samples from Xibo individuals recruited in China as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Xibo,,,,HANCESTRO:0750,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Xibo in China (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Xibo individuals recruited in China as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0754,"Japanese in Tokyo, Japan (1KGP)",Japanese|JPT,"A population made up of 105 samples from Japanese individuals recruited in Tokyo, Japan as part of the 1000 Genomes Project. The population was assigned by the collecting project to the superpopulation East Asian.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Japanese|JPT,,,,HANCESTRO:0754,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,"Japanese in Tokyo, Japan (1KGP)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A population made up of 105 samples from Japanese individuals recruited in Tokyo, Japan as part of the 1000 Genomes Project. The population was assigned by the collecting project to the superpopulation East Asian.",,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0755,"Kinh in Ho Chi Minh City, Vietnam (1KGP)",Kinh Vietnamese|KHV,"A population made up of 124 samples from Kinh individuals recruited in Ho Chi Minh City, Vietnam as part of the 1000 Genomes Project. The population was assigned by the collecting project to the superpopulation East Asian.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Kinh Vietnamese|KHV,,,,HANCESTRO:0755,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,"Kinh in Ho Chi Minh City, Vietnam (1KGP)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A population made up of 124 samples from Kinh individuals recruited in Ho Chi Minh City, Vietnam as part of the 1000 Genomes Project. The population was assigned by the collecting project to the superpopulation East Asian.",,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0759,"Bergamo Italian in Bergamo, Italy (HGDP)",Bergamo Italian,"A population made up of 10 samples from Bergamo Italian individuals recruited in Bergamo, Italy as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation European.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Bergamo Italian,,,,HANCESTRO:0759,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,"Bergamo Italian in Bergamo, Italy (HGDP)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A population made up of 10 samples from Bergamo Italian individuals recruited in Bergamo, Italy as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation European.",,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0758,Basque in France (HGDP),Basque,A population made up of 22 samples from Basque individuals recruited in France as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation European.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Basque,,,,HANCESTRO:0758,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Basque in France (HGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 22 samples from Basque individuals recruited in France as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation European.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_63567,tetrasaccharide derivative,,An oligosaccharide derivative that is formally obtained from a tetrasaccharide.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:63567,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,tetrasaccharide derivative,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An oligosaccharide derivative that is formally obtained from a tetrasaccharide.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0037541,interiliac lymph node,interiliac node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:16651,,,,,,,,,,,,,,,,,,,,,,,,,interiliac node,,,,UBERON:0037541,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,interiliac lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0037540,lateral external iliac lymph node,lateral external iliac node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:16649,,,,,,,,,,,,,,,,,,,,,,,,,lateral external iliac node,,,,UBERON:0037540,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,lateral external iliac lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0037549,inferior gluteal lymph node,inferior gluteal node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:16659,,,,,,,,,,,,,,,,,,,,,,,,,inferior gluteal node,,,,UBERON:0037549,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,inferior gluteal lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0037548,superior gluteal lymph node,superior gluteal node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:16658,,,,,,,,,,,,,,,,,,,,,,,,,superior gluteal node,,,,UBERON:0037548,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,superior gluteal lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002103,subject health status (NCIT),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002103,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,subject health status (NCIT),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"order:
NCIT:C115935 # healthy
NCIT:C126054 # non-pathalogical
NCIT:C25610 # pathologic
NCIT:C82508 # life threatening
NCIT:C28554 # deceased|depth:1",,,,,
http://purl.obolibrary.org/obo/UBERON_0038053,cardiophrenic angle lymph node,cardiophrenic angle node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:265353,,,,,,,,,,,,,,,,,,,,,,,,,cardiophrenic angle node,,,,UBERON:0038053,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,cardiophrenic angle lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038054,retrocrural lymph node,retrocrural node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:265356,,,,,,,,,,,,,,,,,,,,,,,,,retrocrural node,,,,UBERON:0038054,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,retrocrural lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002039,obsolete: antibiotic nonsensitive (high resistance),,Non-susceptible indicates that an isolate is observed to offer complete resistance to a given antibiotic.,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002039,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: antibiotic nonsensitive (high resistance),,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,http://purl.obolibrary.org/obo/NCIT_C85561,,,Non-susceptible indicates that an isolate is observed to offer complete resistance to a given antibiotic.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_13453,gonococcal bursitis,,"A bursitis that is characterized by an inflammation of a bursa caused by the Neisseria gonorrhoeae bacteria, resulting from gonorrhea that has spread to other parts of the body.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:13453,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,gonococcal bursitis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A bursitis that is characterized by an inflammation of a bursa caused by the Neisseria gonorrhoeae bacteria, resulting from gonorrhea that has spread to other parts of the body.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001046,immigration year of arrival,,A time measurement datum indicating the year a person immigrated to a given country.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001046,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,immigration year of arrival,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A time measurement datum indicating the year a person immigrated to a given country.,,,,,,,,
http://purl.obolibrary.org/obo/BFO_0000023,role,,"A role is an entity which is borne in a material entity in some kinds of natural, social or institutional contexts, but which is not essential to the fundamental definition of that material entity (i.e. the material entity exists with or without the role).  For example, the role of a person as a surgeon, the role of an artificial heart in pumping blood, the role of a chemical compound in an experiment, the role of a drug in the treatment of a disease.|A realizable entity  the manifestation of which brings about some result or end that is not essential to a continuant  in virtue of the kind of thing that it is but that can be served or participated in by that kind of continuant  in some kinds of natural, social or institutional contexts.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/CHEBI_50906|NCIt:C48835|MESH:D012380,,,,,,,,,,,,,,,,,,,,,,,http://www.ifomis.org/bfo/1.1/snap#Role,,,,,,BFO:0000023,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl|http://purl.obolibrary.org/obo/omrse.owl|http://purl.obolibrary.org/obo/ido.owl|http://purl.obolibrary.org/obo/cob.owl,,,,,,,,,role|role,,,,,,,,,,,,,,,,,,,,,,,,,,,,James Malone,,,,"A role is an entity which is borne in a material entity in some kinds of natural, social or institutional contexts, but which is not essential to the fundamental definition of that material entity (i.e. the material entity exists with or without the role).  For example, the role of a person as a surgeon, the role of an artificial heart in pumping blood, the role of a chemical compound in an experiment, the role of a drug in the treatment of a disease.|A realizable entity  the manifestation of which brings about some result or end that is not essential to a continuant  in virtue of the kind of thing that it is but that can be served or participated in by that kind of continuant  in some kinds of natural, social or institutional contexts.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100914,turbidity measurement unit,turbidity measurement unit,An environmental data field which describes the units of a measurement of turbidity.,FALSE,,,,,,,PCDS:turbidity_measurement_unit,,,,,,,PCDS: Provide the units of the measured turbidity by selecting a value from the pick list.,,,,,,,,,,,,,,PCDS: nephelometric turbidity unit (NTU),,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,turbidity measurement unit,turbidity measurement unit slot,,,,GENEPIO:0100914,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,turbidity measurement unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the units of a measurement of turbidity.,,PCDS: The units of a measurement of turbidity.,,,,,,
http://purl.obolibrary.org/obo/NCIT_C25610,Pathologic,sick|Pathologic|PATHOLOGICAL,Caused by or altered by or manifesting disease or pathology.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,sick|Pathologic|PATHOLOGICAL,,,,NCIT:C25610,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Pathologic,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Caused by or altered by or manifesting disease or pathology.,,,,diseased,,,,
http://purl.obolibrary.org/obo/FOODON_02021242,lamb retail cut (raw),,A raw lamb retail cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02021242,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lamb retail cut (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw lamb retail cut.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001447,sequencing date,sequencing date,A date field which describes the date the sample was sequenced.,FALSE,,,,,,,PCDS:sequencing_date,,,,,,,PCDS: ISO 8601 standard 'YYYY-MM-DD'.,,,,,,,,,,,,,,PCDS: 2024-02-01,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,sequencing date,sequencing date slot,,,,GENEPIO:0001447,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,sequencing date,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A date field which describes the date the sample was sequenced.,,PCDS: The date the sample was sequenced.,,,,,,
http://purl.obolibrary.org/obo/CHEBI_48838,gypsum,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:48838,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,gypsum,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100783,turbidity measurement value,turbidity measurement value,An environmental data field which describes the numerical value of a measurement of turbidity.,FALSE,,,,,,,PCDS:turbidity_measurement_value,,,,,,,PCDS: Provide the numerical value of the measured turbidity.,,,,,,,,,,,,,,PCDS: 0.02,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,turbidity measurement value,turbidity measurement value slot,,,,GENEPIO:0100783,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,turbidity measurement value,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the numerical value of a measurement of turbidity.,,PCDS: The numerical value of a measurement of turbidity.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001697,listeria serotype 4a,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001697,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,listeria serotype 4a,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001838,PubMed,,"PubMed comprises more than 26 million citations for biomedical literature from MEDLINE, life science journals, and online books. Citations may include links to full-text content from PubMed Central and publisher web sites.",FALSE,,,,,,,NCBI PubMed,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000120,PMID,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001838,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PubMed,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.ncbi.nlm.nih.gov/pubmed/,,"PubMed comprises more than 26 million citations for biomedical literature from MEDLINE, life science journals, and online books. Citations may include links to full-text content from PubMed Central and publisher web sites.",,,,,,,,
http://purl.obolibrary.org/obo/OBA_2001020,age of onset of Buruli ulcer disease,age at onset of Buruli ulcer disease|age Buruli ulcer disease symptoms begin,The age at which Buruli ulcer disease manifestations first appear.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,age at onset of Buruli ulcer disease|age Buruli ulcer disease symptoms begin,,,,OBA:2001020,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age of onset of Buruli ulcer disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The age at which Buruli ulcer disease manifestations first appear.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C96580,Biological Mother,"Natural Mother|Mother|MOTHER, BIOLOGICAL|Biological Mother",A female who contributes to the genetic makeup of her offspring from the fertilization of her ovum.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Natural Mother|Mother|MOTHER, BIOLOGICAL|Biological Mother",,,,NCIT:C96580,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Biological Mother,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A female who contributes to the genetic makeup of her offspring from the fertilization of her ovum.,,,,,,,,
http://purl.obolibrary.org/obo/OBA_2001028,age of onset of migraine without aura,age migraine without aura symptoms begin|age at onset of migraine without aura,The age at which migraine without aura manifestations first appear.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,age migraine without aura symptoms begin|age at onset of migraine without aura,,,,OBA:2001028,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age of onset of migraine without aura,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The age at which migraine without aura manifestations first appear.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100141,Oxford Nanopore GridION,,"A DNA sequencer that is manufactured by the Oxford Nanopore Technologies corporation, that can run and analyze up to five individual flow cells producing up to 150 Gb of data per run. The sequencer produces real-time results and utilizes nanopore technology with the option of running the flow cells concurrently or individual",FALSE,,,,,,,,,,,,,,,,,,,,,https://nanoporetech.com/products/sequence/gridion,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100141,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,Oxford Nanopore GridION,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A DNA sequencer that is manufactured by the Oxford Nanopore Technologies corporation, that can run and analyze up to five individual flow cells producing up to 150 Gb of data per run. The sequencer produces real-time results and utilizes nanopore technology with the option of running the flow cells concurrently or individual",,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0475,Palauan,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0475,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Palauan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0470,Marshallese,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0470,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Marshallese,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0474,Niuean,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0474,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Niuean,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0479,Solomon Islander,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0479,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Solomon Islander,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0471,Micronesian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0471,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Micronesian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0473,New Caledonian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0473,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,New Caledonian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0472,Nauruan,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0472,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Nauruan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0476,Papua New Guinean,,,FALSE,,,,,,,Papuan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0476,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Papua New Guinean,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0478,Samoan,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0478,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Samoan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0477,Pitcairn Islander,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0477,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Pitcairn Islander,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100042,EFK3B cell line,Eptesicus fucus kidney 3B cell|Efk3B cell|Efk-3B clone 3B cell,Eptesicus fucus (big brown bat) kidney 3B cells.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,Eptesicus fucus kidney 3B cell|Efk3B cell|Efk-3B clone 3B cell,,,,GENEPIO:0100042,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,EFK3B cell line,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Eptesicus fucus (big brown bat) kidney 3B cells.,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0018882,vasculitis,systemic vasculitis,"Vasculitis represents a clinically heterogenous group of diseases of multifactorial etiology characterized by inflammation of either large-sized vessels (large-vessel vasculitis, e.g. Giant-cell arteritis and Takayasu arteritis), medium-sized vessels (medium-vessel vasculitis e.g. polyarteritis nodosa and Kawasaki disease), or small-sized vessels (small-vessel vasculitis, e.g. granulomatosis with polyangiitis, microscopic polyangiitis, immunoglobulin A vasculitis, and cutaneous leukocytoclastic angiitis). Vasculitis occurs at any age, may be acute or chronic, and manifests with general symptoms such as fever, weight loss and fatigue, as well as more specific clinical signs depending on the type of vessels and organs affected. The degree of severity is variable, ranging from life or sight threatening disease (e.g. Behcet disease) to relatively minor skin disease.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,icd11.foundation:572581721|Wikipedia:Vasculitis|UMLS:C0042384|SCTID:31996006|Orphanet:52759|NCIT:C26912|MedDRA:10047115|MedDRA:10036023|MESH:D014657|MEDGEN:12054|GARD:0018844|EFO:0006803|DOID:865,,,,,,,,,,,,,,,,,,,,,,,,,,systemic vasculitis,,,MONDO:0018882,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#rare|http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar|http://purl.oboInOwllibrary.org/oboInOwl/mondo#ordo_group_of_disorders|http://purl.oboInOwllibrary.org/oboInOwl/mondo#gard_rare|http://purl.oboInOwllibrary.org/oboInOwl/mondo#doid_rare|http://purl.oboInOwllibrary.org/oboInOwl/mondo#disease_grouping,,,,,,,,vasculitis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Vasculitis represents a clinically heterogenous group of diseases of multifactorial etiology characterized by inflammation of either large-sized vessels (large-vessel vasculitis, e.g. Giant-cell arteritis and Takayasu arteritis), medium-sized vessels (medium-vessel vasculitis e.g. polyarteritis nodosa and Kawasaki disease), or small-sized vessels (small-vessel vasculitis, e.g. granulomatosis with polyangiitis, microscopic polyangiitis, immunoglobulin A vasculitis, and cutaneous leukocytoclastic angiitis). Vasculitis occurs at any age, may be acute or chronic, and manifests with general symptoms such as fever, weight loss and fatigue, as well as more specific clinical signs depending on the type of vessels and organs affected. The degree of severity is variable, ranging from life or sight threatening disease (e.g. Behcet disease) to relatively minor skin disease.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0101075,taxonomic analysis date,taxonomic analysis date,A data field which describes the date a taxonomic analysis was performed.,FALSE,,,,,,,PCDS:taxonomic_analysis_date,,,,,,,"PCDS: Providing the date that an analyis was performed can help provide context for tool and reference database versions. Provide the date that the taxonomic analysis was performed in ISO 8601 format, i.e. 'YYYY-MM-DD'.",,,,,,,,,,,,,,PCDS: 2024-02-01,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,taxonomic analysis date,taxonomic analysis date slot,,,,GENEPIO:0101075,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,taxonomic analysis date,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the date a taxonomic analysis was performed.,,PCDS: The date a taxonomic analysis was performed.,,,,,,
http://purl.obolibrary.org/obo/FOODON_00003303,beef top loin steak,,A boneless steak cut from the sirloin region,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00003303,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef top loin steak,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A boneless steak cut from the sirloin region,,,,,,,,
http://purl.obolibrary.org/obo/TRANS_0000007,contact,,"Contact transmission is a direct transmission process during which the pathogen is transmitted from a reservoir, source or host to another host by kissing, skin-to-skin contact, sexual intercourse, or by contact with soil or vegetation containing the pathogen.",FALSE,,,,,,,,,,,,,,,,,,,,,https://www.ebi.ac.uk/ols/ontologies/trans,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,TRANS:0000007,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,contact,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Contact transmission is a direct transmission process during which the pathogen is transmitted from a reservoir, source or host to another host by kissing, skin-to-skin contact, sexual intercourse, or by contact with soil or vegetation containing the pathogen.",,,,contact transmission,,,,
http://purl.obolibrary.org/obo/GENEPIO_0101204,insdc assembly accession,,A unique identifier that denotes an assembly record submitted to the International Nucleotide Sequence Database Collaboration (INSDC).,FALSE,,,,,,,PCDS:insdc_assembly_accession,,,,,,,PCDS: Store the versioned accession assigned to the submitted sequence; e.g. the GenBank accession version.,,,,,,,,,,,,,,PCDS: LZ986655.1,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0101204,,,,,,,,,,,,,,2026-04-09T18:02:29.914Z,,,,,,,,,,,,,,,,,,,insdc assembly accession,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A unique identifier that denotes an assembly record submitted to the International Nucleotide Sequence Database Collaboration (INSDC).,,PCDS: The versioned identifier assigned to an assembly or consensus sequence in one of the International Nucleotide Sequence Database Collaboration (INSDC) repositories.,,,,,,
http://purl.obolibrary.org/obo/UBERON_3000961,external integument structure,,"Structures of the dermis, epidermis, glands and pigment cells recognizable on the external surfaces of the integument.",FALSE,,,,,,,,,,,,,,Not clear how this differs from parent class. See https://github.com/obophenotype/uberon/issues/1305,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:3000961,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,external integument structure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Structures of the dermis, epidermis, glands and pigment cells recognizable on the external surfaces of the integument.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100997,sequencing assay type,sequencing assay type,A data field which describes the sequencing assay that is used to determine the information on the sequence of a molecule,FALSE,,,,,,,PCDS:sequencing_assay_type,,,,,,,"PCDS: Provide the name of the DNA or RNA sequencing technology used in your study. If unsure refer to the protocol documentation, or provide a null value.",,,,,,,,,,,Drafted 2023-12-20,,,PCDS: Amplicon sequencing assay,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,sequencing assay type,sequencing assay type slot,,,,GENEPIO:0100997,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,sequencing assay type,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the sequencing assay that is used to determine the information on the sequence of a molecule,,PCDS: The overarching sequencing methodology that was used to determine the sequence of a biomaterial.,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510190,"infant as food consumer, 3 - 6 months",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0190,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510190,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"infant as food consumer, 3 - 6 months",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000814,solid environmental material,,An environmental material which is in a solid state.,FALSE,,,,,,,,,,,,,,"This is a defined class: its subclasses will not be asserted, but filled by inference.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01000814,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,solid environmental material,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental material which is in a solid state.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001675,obsolete: matrix - solid,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001675,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: matrix - solid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100600,breadth of coverage percentage,,A data item which is breadth of coverage datum as a percentage.,FALSE,,,,,,,coverage (breadth) | breadth of coverage %| % coverage (breadth) ,,,,,,,,,,,,,,Emma Griffiths,,,,,breadth of coverage percentage,,The breadth of coverage of the sequence of interest to the reference sequence was 75%.,,,ready for release,http://purl.obolibrary.org/obo/OBI_0002880,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100600,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,breadth of coverage percentage,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-1107-9135,,,https://github.com/obi-ontology/obi/issues/1579,A data item which is breadth of coverage datum as a percentage.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002013,TB lineage 5 - West African 1,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002013,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,TB lineage 5 - West African 1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100525,AMR phenotype,antimicrobial resistance phenotype|AMR_phenotype|AMR phenotype,"A data field which describes an antimicrobial resistance (AMR) phenotype, as determined by the antibiotic susceptibility measurement and testing standard for the antibiotic specified.",FALSE,,,,,,,PCDS:amr_phenotype|PCDS:*_resistance_phenotype,,,,,,,PCDS: Select a phenotype from the pick list provided.,,,,,,,,,,,Dependent on the value specified in the 'antimicrobial agent name field' [GENEPIO:0100521],,,PCDS: Susceptible antimicrobial phenotype [ARO:3004302],,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,antimicrobial resistance phenotype|AMR_phenotype|AMR phenotype,antimicrobial resistance phenotype slot|antimicrobial resistance phenotype field|AMR phenotype slot,,,,GENEPIO:0100525,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-12-22T00:55:53.808Z,,,,,,,,,,,,,,,,,,,AMR phenotype,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A data field which describes an antimicrobial resistance (AMR) phenotype, as determined by the antibiotic susceptibility measurement and testing standard for the antibiotic specified.",,"PCDS: The antimicrobial resistance phenotype, as determined by the antibiotic susceptibility measurement and testing standard.",,,,,,
http://purl.obolibrary.org/obo/HP_0001939,Abnormality of metabolism/homeostasis,Metabolism abnormality|Laboratory abnormality,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4021768,,,,,,,,,,,,,,,,,,,,,,,HP:0004367|HP:0004355|HP:0002146,,Metabolism abnormality|Laboratory abnormality,,,,HP:0001939,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormality of metabolism/homeostasis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000426,room,,"A building part which is separated from other building parts by one or more interior walls and, optionally, outdoor areas by one or more exterior walls.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01000426,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,room,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A building part which is separated from other building parts by one or more interior walls and, optionally, outdoor areas by one or more exterior walls.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03460256,carbohydrate fermentation,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=H0256,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03460256,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,carbohydrate fermentation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00008595,"populated place, Senegal",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00008595,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Senegal",http://purl.obolibrary.org/obo/GAZ_00000913,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002022,treated and transferred,,Received treatment. Transferred to a different facility.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,http://purl.obolibrary.org/obo/GENEPIO_0001837,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002022,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,treated and transferred,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Received treatment. Transferred to a different facility.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001264,passage method,passage method,A data field which describes how the organism was passaged.,FALSE,,,,,,,PCDS:passage_method,,,,,,,"PCDS: Free text. Provide a short description. If not passaged, put 'not applicable'.",,,,,,,,,,,,,,PCDS: 0.25% trypsin + 0.02% EDTA,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,passage method,passage method slot,,,,GENEPIO:0001264,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,passage method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes how the organism was passaged.,,PCDS: Description of how organism was passaged.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000130,epi contact network model - animal,,This is a model that provides location and transportation information about an animal that may be involved in transmitting a pathogen to a human or other animal.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000130,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,epi contact network model - animal,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,This is a model that provides location and transportation information about an animal that may be involved in transmitting a pathogen to a human or other animal.,,,,,,,,
http://purl.obolibrary.org/obo/OBA_2055786,age of onset of chronic obstructive pulmonary disease,age chronic obstructive pulmonary disease symptoms begin|age at onset of chronic obstructive pulmonary disease,The age at which chronic obstructive pulmonary disease manifestations first appear.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,age chronic obstructive pulmonary disease symptoms begin|age at onset of chronic obstructive pulmonary disease,,,,OBA:2055786,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age of onset of chronic obstructive pulmonary disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The age at which chronic obstructive pulmonary disease manifestations first appear.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_24780,imidazoles,,"A five-membered organic heterocycle containing two nitrogen atoms at positions 1 and 3, or any of its derivatives; compounds containing an imidazole skeleton.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:24780,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,imidazoles,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A five-membered organic heterocycle containing two nitrogen atoms at positions 1 and 3, or any of its derivatives; compounds containing an imidazole skeleton.",,,,,,,,
http://purl.obolibrary.org/obo/MONDO_1060199,hemorrhagic stroke,haemorrhagic stroke,A stroke disorder caused by bleeding into the brain parenchyma or surrounding spaces. Hemorrhagic stroke includes intracerebral hemorrhage (bleeding within the brain tissue) and subarachnoid hemorrhage (bleeding in the space between the brain and the surrounding membrane).,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C5234922|MEDGEN:1714259|DOID:0051063,,,,,,,,,,,,,,,,,,,,,,,,,haemorrhagic stroke,,,,MONDO:1060199,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,,,,,,,,,hemorrhagic stroke,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A stroke disorder caused by bleeding into the brain parenchyma or surrounding spaces. Hemorrhagic stroke includes intracerebral hemorrhage (bleeding within the brain tissue) and subarachnoid hemorrhage (bleeding in the space between the brain and the surrounding membrane).,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C3198,Lung Disorder,Pulmonary Disorders|Pulmonary Disorder|Pulmonary Diseases|Pulmonary Disease|Lung Disorders|Lung Disorder|Disorder of Lung,"A non-neoplastic or neoplastic disorder affecting the lung. Representative examples of non-neoplastic disorders include chronic obstructive pulmonary disease and pneumonia. Representative examples of neoplastic disorders include benign processes (e.g., respiratory papilloma) and malignant processes (e.g., lung carcinoma and metastatic cancer to the lung).",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Pulmonary Disorders|Pulmonary Disorder|Pulmonary Diseases|Pulmonary Disease|Lung Disorders|Lung Disorder|Disorder of Lung,,,,NCIT:C3198,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Lung Disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A non-neoplastic or neoplastic disorder affecting the lung. Representative examples of non-neoplastic disorders include chronic obstructive pulmonary disease and pneumonia. Representative examples of neoplastic disorders include benign processes (e.g., respiratory papilloma) and malignant processes (e.g., lung carcinoma and metastatic cancer to the lung).",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C3196,Liver and Intrahepatic Bile Duct Disorder,"Liver disease, unspecified|Liver disease|Liver and Intrahepatic Bile Duct Disorder|Liver Disorder|Liver Disease|Hepatic Disorder","A non-neoplastic or neoplastic disorder that affects the liver parenchyma and intrahepatic bile ducts. Representative examples of non-neoplastic disorders include hepatitis, cirrhosis, cholangitis, and polycystic liver disease. Representative examples of neoplastic disorders include hepatocellular adenoma, hepatocellular carcinoma, intrahepatic cholangiocarcinoma, lymphoma, and angiosarcoma.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Liver disease, unspecified|Liver disease|Liver and Intrahepatic Bile Duct Disorder|Liver Disorder|Liver Disease|Hepatic Disorder",,,,NCIT:C3196,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Liver and Intrahepatic Bile Duct Disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A non-neoplastic or neoplastic disorder that affects the liver parenchyma and intrahepatic bile ducts. Representative examples of non-neoplastic disorders include hepatitis, cirrhosis, cholangitis, and polycystic liver disease. Representative examples of neoplastic disorders include hepatocellular adenoma, hepatocellular carcinoma, intrahepatic cholangiocarcinoma, lymphoma, and angiosarcoma.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_59770,cyclic acetal,,An acetal in the molecule of which the acetal carbon and one or both oxygen atoms thereon are members of a ring.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:59770,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,cyclic acetal,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An acetal in the molecule of which the acetal carbon and one or both oxygen atoms thereon are members of a ring.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002078,number of passages,,The number of serial iterations that an isolate is grown in one environment.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002078,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,number of passages,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,The number of serial iterations that an isolate is grown in one environment.,,,help=The number of passages should be expressed as a numerical value.,,,,,
http://purl.obolibrary.org/obo/CHEBI_35505,hydrate,,An addition compound that contains water in weak chemical combination with another compound.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:35505,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,hydrate,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An addition compound that contains water in weak chemical combination with another compound.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0003968,peripheral lymph node,,"The lymph nodes located outside the thoracic and abdominal cavities, such as the submandibular, prescapular, axillary, inguinal and popliteal lymph nodes.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,EMAPA:37938,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0003968,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,peripheral lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The lymph nodes located outside the thoracic and abdominal cavities, such as the submandibular, prescapular, axillary, inguinal and popliteal lymph nodes.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00005414,veal shank,,A veal cut that comes from the front leg or rear leg.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00005414,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,veal shank,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A veal cut that comes from the front leg or rear leg.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100216,outdoors exposure process,,A process occuring outdoors that exposes the recipient organism to a material entity.,FALSE,,,,,,,Outdoors,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100216,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,outdoors exposure process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A process occuring outdoors that exposes the recipient organism to a material entity.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0032243,Abnormal tissue metabolite concentration,,Any deviation from the normal concentration of a metabolite in a tissue.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0032243,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal tissue metabolite concentration,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any deviation from the normal concentration of a metabolite in a tissue.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002052,obsolete: Sensititre,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002052,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: Sensititre,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ARO_3004402,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_10458,legionellosis,,"A primary bacterial infectious disease that results_in infection located_in respiratory tract, has_material_basis_in Legionella pneumophila, which is transmitted_by inhalation of droplets containing bacteria. The symptoms include dry cough, fever, headache and diarrhea.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:10458,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,legionellosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A primary bacterial infectious disease that results_in infection located_in respiratory tract, has_material_basis_in Legionella pneumophila, which is transmitted_by inhalation of droplets containing bacteria. The symptoms include dry cough, fever, headache and diarrhea.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_10457,Legionnaires' disease,,"A legionellosis that is characterized by severe form of infection producing pneumonia. Symptoms include fever, chills, and cough.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:10457,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,Legionnaires' disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A legionellosis that is characterized by severe form of infection producing pneumonia. Symptoms include fever, chills, and cough.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_24400,glycoside,,"A glycosyl compound resulting from the attachment of a glycosyl group to a non-acyl group RO‒, RS‒, RSe‒, etc. The bond between the glycosyl group and the non-acyl group is called a glycosidic bond. By extension, the terms <em>N</em>-glycosides and <em>C</em>-glycosides are used as class names for glycosylamines and for compounds having a glycosyl group attached to a hydrocarbyl group respectively. These terms are misnomers and should not be used. The preferred terms are glycosylamines and <em>C</em>-glycosyl compounds, respectively.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:24400,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,glycoside,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A glycosyl compound resulting from the attachment of a glycosyl group to a non-acyl group RO‒, RS‒, RSe‒, etc. The bond between the glycosyl group and the non-acyl group is called a glycosidic bond. By extension, the terms <em>N</em>-glycosides and <em>C</em>-glycosides are used as class names for glycosylamines and for compounds having a glycosyl group attached to a hydrocarbyl group respectively. These terms are misnomers and should not be used. The preferred terms are glycosylamines and <em>C</em>-glycosyl compounds, respectively.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_36359,phosphorus oxoacid derivative,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:36359,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,phosphorus oxoacid derivative,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001805,variant calling / pathogen identification and clustering,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001805,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,variant calling / pathogen identification and clustering,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470106,food smoking,,"Smoking is the process of flavoring, browning, cooking, or preserving food by exposing it to smoke from burning or smoldering material, most often wood.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0106,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470106,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food smoking,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Smoking is the process of flavoring, browning, cooking, or preserving food by exposing it to smoke from burning or smoldering material, most often wood.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00001820,dolphinfish food product,,A product deriving from mahi-mahi or common dolphinfish (Coryphaena hippurus) also widely called dorado and dolphin.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00001820,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,dolphinfish food product,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A product deriving from mahi-mahi or common dolphinfish (Coryphaena hippurus) also widely called dorado and dolphin.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100091,acute liver injury,,A condition of liver damage that is characterized by coagulopathy with no signs of encephalopathy.,FALSE,,,,,,,,,,,,,,,,,,,,,https://doi.org/10.1016/j.aohep.2018.11.009,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100091,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,acute liver injury,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A condition of liver damage that is characterized by coagulopathy with no signs of encephalopathy.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03601005,consumer-ready food packaging,,A food packaging type which is intended for the consumer to remove or open to access food material.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03601005,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,consumer-ready food packaging,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A food packaging type which is intended for the consumer to remove or open to access food material.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_26961,thiophenes,,Compounds containing at least one thiophene ring.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:26961,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,thiophenes,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Compounds containing at least one thiophene ring.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100257,firefighter role,,A role inhering in a person that is realized when the bearer is a rescuer extensively trained in firefighting.,FALSE,,,,,,,Firefighter,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Firefighter,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100257,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,firefighter role,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A role inhering in a person that is realized when the bearer is a rescuer extensively trained in firefighting.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100860,midnight-bccdc-v3 strategy,,"An amplicon strategy which targets SARS-CoV-2 and is based on the original Midnight scheme developed by Oxford Nanopore Technologies, and adapted by the BCCDC Public Health Lab with the attributes of version 3.0.0 which produces amplicons approximately 1200bp in length.",FALSE,,,,,,,midnight-bccdc-v3|midnight bccdc v3,,,,,,,,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100860,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2026-04-13T19:52:38.515Z,,,,,,,,,,,,,,,,,,,midnight-bccdc-v3 strategy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An amplicon strategy which targets SARS-CoV-2 and is based on the original Midnight scheme developed by Oxford Nanopore Technologies, and adapted by the BCCDC Public Health Lab with the attributes of version 3.0.0 which produces amplicons approximately 1200bp in length.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000287,pork leg shank half,,A leg half that is derived from a whole pork leg. The anatomical location is the “Half” that comes from the Shank or lower section of the Leg,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000287,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pork leg shank half,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A leg half that is derived from a whole pork leg. The anatomical location is the “Half” that comes from the Shank or lower section of the Leg,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000075,sequencing chemistry,,A laboratory sequencing datum which describes the method and chemistry used to determine the order of nucleotides in a DNA molecule.,FALSE,,,,,,,,,,,,,,,,,,,,,GROUP: IRIDA Ontology (Emma),,,,,,,"amplicon, resequencing (WGS)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000075,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,,,,,,,sequencing chemistry,,,,,Sequencing,,,,,,,,,,,,,,,,,,,,,,Chemistry,,,Derived from Illumina Sample Sheet,,A laboratory sequencing datum which describes the method and chemistry used to determine the order of nucleotides in a DNA molecule.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100750,available data types enumeration,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100750,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,available data types enumeration,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000034,conductivity measurement datum,,An environmental datum which describes the electrical conductivity of water.,FALSE,,,,,,,,,,,,,,,,,,,,,GROUP: MIxS enviro package,,,,,,,milliSiemens per centimeter,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000034,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,,,,,,,conductivity measurement datum,,,,,Environmental Isolate,,,,,,,,,,,,,,,,,,,,,,Conductivity,,,GROUP: MIxS,,An environmental datum which describes the electrical conductivity of water.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_51454,cyclopropanes,,Cyclopropane and its derivatives formed by substitution.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:51454,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,cyclopropanes,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Cyclopropane and its derivatives formed by substitution.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C35742,Thoracic Disorder,Thoracic Disorder|Thoracic Disease,"A non-neoplastic or neoplastic disorder that affects the thorax and/or the organs of the thoracic cavity.  Representative examples include pleural infection, mediastinitis, thymoma, mediastinal lymphoma, and pleural mesothelioma.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Thoracic Disorder|Thoracic Disease,,,,NCIT:C35742,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Thoracic Disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A non-neoplastic or neoplastic disorder that affects the thorax and/or the organs of the thoracic cavity.  Representative examples include pleural infection, mediastinitis, thymoma, mediastinal lymphoma, and pleural mesothelioma.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001438,prior sarscov2 antiviral treatment,prior SARS-CoV-2 antiviral treatment,A data field which describes whether there was prior Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) treatment with an antiviral agent.,FALSE,,,,,,,PCDS:prior_sarscov2_antiviral_treatment,,,,,,,"PCDS: If known, provide information about whether the individual had a previous SARS-CoV-2 antiviral treatment. Select a value from the pick list.",,,,,,,,,,,,,,PCDS: No prior antiviral treatment,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,prior SARS-CoV-2 antiviral treatment,prior SARS-CoV-2 antiviral treatment slot,,,,GENEPIO:0001438,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,prior sarscov2 antiviral treatment,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes whether there was prior Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) treatment with an antiviral agent.,,PCDS: Whether there was prior SARS-CoV-2 treatment with an antiviral agent.,,,,,,
http://purl.obolibrary.org/obo/ENVO_02000054,bone meal,,A mixture of crushed and coarsely ground bones that is used as an organic fertilizer for plants and formerly in animal feed.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Bone_meal,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:02000054,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,bone meal,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A mixture of crushed and coarsely ground bones that is used as an organic fertilizer for plants and formerly in animal feed.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490279,"glass container, coloured, light weight",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0279,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490279,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"glass container, coloured, light weight",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001136,bioproject accession,bioproject_accession|bioproject accession,An identifier field which describes the International Nucleotide Sequence Database Collaboration (INSDC) accession number of the BioProject(s) to which the BioSample belongs.,FALSE,,,,,,,PCDS:bioproject_accession,,,,,,,"PCDS: Required if submission is linked to a BioProject. BioProjects are an organizing tool that links together raw sequence data, assemblies, and their associated metadata. A valid BioProject accession has prefix PRJN, PRJE or PRJD and is created once at the beginning of a new sequencing project. Your laboratory can have one or many BioProjects.",,,,,,,,,,,,,,PCDS: PRJNA12345,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,bioproject_accession|bioproject accession,bioproject accession slot,,,,GENEPIO:0001136,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,bioproject accession,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An identifier field which describes the International Nucleotide Sequence Database Collaboration (INSDC) accession number of the BioProject(s) to which the BioSample belongs.,,"PCDS: The INSDC (i.e., ENA, NCBI, or DDBJ) accession number of the BioProject(s) to which the BioSample belongs.",,,,,,
http://purl.obolibrary.org/obo/DOID_873,anaerobic pneumonia,,"An aspiration pneumonia caused by anaerobic bacteria like Bacteroides fragilis, Peptostreptococcus, anaerobic streptococci, Fusobacterium species (Fusobacterium nucleatum and Fusobacterium necrophoram). Lung abscess and empyema are diagnosed in this disease.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:873,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,anaerobic pneumonia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An aspiration pneumonia caused by anaerobic bacteria like Bacteroides fragilis, Peptostreptococcus, anaerobic streptococci, Fusobacterium species (Fusobacterium nucleatum and Fusobacterium necrophoram). Lung abscess and empyema are diagnosed in this disease.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_874,bacterial pneumonia,,A pneumonia involving inflammation of the lungs caused by bacteria.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:874,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,bacterial pneumonia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A pneumonia involving inflammation of the lungs caused by bacteria.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_14019,Brucella canis brucellosis,,"A brucellosis involving an infection caused by Brucella canis in dogs and humans. The disease has_symptom fever, has_symptom sweats, has_symptom weakness, has_symptom weight loss, has_symptom headache, has_symptom lymphadenopathy and has_symptom splenomegaly.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:14019,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,Brucella canis brucellosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A brucellosis involving an infection caused by Brucella canis in dogs and humans. The disease has_symptom fever, has_symptom sweats, has_symptom weakness, has_symptom weight loss, has_symptom headache, has_symptom lymphadenopathy and has_symptom splenomegaly.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100117,obsolete: Illumina HiSeq 2500,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,Rehomed in OBI,,,,,,,,,,,,,,,,,,,GENEPIO:0100117,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: Illumina HiSeq 2500,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/OBI_0002002,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001387,host (scientific name),host (scientific name),A host field which describes the taxonomic or scientific name of the host.,FALSE,,,,,,,PCDS:host_scientific_name,,,,,,,"PCDS: Provide the scientific (taxonomic) name of the host organism. If known, the common (vernacular) name should be recorded separately in host_common_name.",,,,,,,,,,,,,,PCDS: Homo sapiens,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,host (scientific name),host (scientific name) slot,,,,GENEPIO:0001387,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,host (scientific name),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A host field which describes the taxonomic or scientific name of the host.,,"PCDS: The taxonomic, or scientific name of the host.",,,,,,
http://purl.obolibrary.org/obo/FOODON_03510111,no nitrite/nitrate added claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0111,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510111,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,no nitrite/nitrate added claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_24431,chemical entity,,"A chemical entity is a physical entity of interest in chemistry including molecular entities, parts thereof, and chemical substances.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:24431,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,chemical entity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A chemical entity is a physical entity of interest in chemistry including molecular entities, parts thereof, and chemical substances.",,,,,,,,
http://purl.obolibrary.org/obo/ARO_3004392,thin-layer chromatography (TLC)-bioautography,,Components of complex mixtures such as plant extracts are separated across a TLC plate and tested for anti-microbial activity.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ARO:3004392,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/aro.owl,,,,,,,,,thin-layer chromatography (TLC)-bioautography,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Components of complex mixtures such as plant extracts are separated across a TLC plate and tested for anti-microbial activity.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0010912,subdivision of skeleton,skeletal subdivision,"Anatomical cluster consisting of the skeletal elements (i.e. bone elements, cartilage elements, cartilage condensations) that are part of an individual subdivision of the organism. Excludes joints.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,VSAO:0000042|SCTID:129140006|FMA:23879,,,,,,,,,,,,,,,,,,,,,,,,,skeletal subdivision,,,,UBERON:0010912,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,subdivision of skeleton,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Anatomical cluster consisting of the skeletal elements (i.e. bone elements, cartilage elements, cartilage condensations) that are part of an individual subdivision of the organism. Excludes joints.",,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0005385,vascular disorder,vasculature disease or disorder|vasculature disease|vascular disorder|disorder of vasculature|disease or disorder of vasculature|disease of vasculature,"A general term used to describe any disease affecting blood vessels]. It includes vascular abnormalities caused by degenerative, metabolic and inflammatory conditions, embolic diseases, coagulative disorders, and functional disorders such as posteri or reversible encephalopathy syndrome.",FALSE,,,,,,,,,,,,,,"The etiology of vasculopathy is generally unknown and the condition is frequently not pathologically proven. Vasculitis, on the other hand, is a more specific term and is defined as inflammation of the wall of a blood vessel. However, the term vasculopathy is also used for “vasculitis” that has not been pathologically established.",,,,,,,,,,,,,,,,,,UMLS:C0042373|SCTID:27550009|NCIT:C35117|NANDO:2100294|MESH:D014652|MEDGEN:22621|ICD9:442.9|ICD10CM:I70-I79|ICD10CM:I00-I99|EFO:0004264|DOID:178,,,,,,,,,,,,,,,,,,,,,,,,,vasculature disease or disorder|vasculature disease|vascular disorder|disorder of vasculature|disease or disorder of vasculature|disease of vasculature,,,,MONDO:0005385,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#rare_grouping|http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,vascular disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A general term used to describe any disease affecting blood vessels]. It includes vascular abnormalities caused by degenerative, metabolic and inflammatory conditions, embolic diseases, coagulative disorders, and functional disorders such as posteri or reversible encephalopathy syndrome.",,,,,,,,
http://purl.obolibrary.org/obo/OMRSE_00000030,human patient role,,A patient role that inheres in a human being.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OMRSE:00000030,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/omrse.owl,,,,,,,,,human patient role,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A patient role that inheres in a human being.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00005501,mammal material,,Material which derives from one or more mammals.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00005501,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,mammal material,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Material which derives from one or more mammals.,,,,,,,,
http://purl.obolibrary.org/obo/ECTO_1000034,exposure to farm,farm exposure,A exposure event involving the interaction of an exposure receptor to farm.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,farm exposure,,,,ECTO:1000034,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ecto.owl,,,,,,,,,exposure to farm,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A exposure event involving the interaction of an exposure receptor to farm.,,,,,,,,
http://purl.obolibrary.org/obo/ECTO_1000035,exposure to hospital,hospital exposure,A exposure event involving the interaction of an exposure receptor to hospital.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,hospital exposure,,,,ECTO:1000035,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ecto.owl,,,,,,,,,exposure to hospital,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A exposure event involving the interaction of an exposure receptor to hospital.,,,,,,,,
http://purl.obolibrary.org/obo/ECTO_1000036,exposure to laboratory,laboratory facility exposure,A exposure event involving the interaction of an exposure receptor to laboratory facility.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,laboratory facility exposure,,,,ECTO:1000036,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ecto.owl,,,,,,,,,exposure to laboratory,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A exposure event involving the interaction of an exposure receptor to laboratory facility.,,,,,,,,
http://purl.obolibrary.org/obo/ECTO_1000033,exposure to abattoir,abattoir exposure,A exposure event involving the interaction of an exposure receptor to abattoir.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,abattoir exposure,,,,ECTO:1000033,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ecto.owl,,,,,,,,,exposure to abattoir,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A exposure event involving the interaction of an exposure receptor to abattoir.,,,,,,,,
http://purl.obolibrary.org/obo/ECTO_1000037,exposure to office,office exposure,A exposure event involving the interaction of an exposure receptor to office.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,office exposure,,,,ECTO:1000037,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ecto.owl,,,,,,,,,exposure to office,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A exposure event involving the interaction of an exposure receptor to office.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0012252,Abnormal respiratory system morphology,,A structural anomaly of the respiratory system.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4022992|Fyler:4235,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0012252,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal respiratory system morphology,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A structural anomaly of the respiratory system.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490165,aluminum tray or pan,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0165,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490165,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,aluminum tray or pan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000181,mangrove biome,,"A mangrove biome is a terrestrial biome which includes, across its spatial extent, mangrove plants (Rhizophoraceae). Mangrove plants are able to withstand high levels of salinity as well as regions of anoxia and frequent tidal inundation. Mangrove biomes often occur near tropical and sub-tropical estuaries and depositional marine coastal environments where fine sediments (often with high organic content) collect in areas protected from high energy wave action.",FALSE,,,,,,,,,,,,,,"Preliminary definition. Depending on whether mangrove trees or shrubs are present, this class could be a child of shrubland biome or woodland biome. Consider creating the appropriate classes.",,,,,,,,,,,,,,,,,,LTER:322,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01000181,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,wwfBiome,,,,,,,,mangrove biome,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A mangrove biome is a terrestrial biome which includes, across its spatial extent, mangrove plants (Rhizophoraceae). Mangrove plants are able to withstand high levels of salinity as well as regions of anoxia and frequent tidal inundation. Mangrove biomes often occur near tropical and sub-tropical estuaries and depositional marine coastal environments where fine sediments (often with high organic content) collect in areas protected from high energy wave action.",,,,,,,,
http://purl.obolibrary.org/obo/OBI_0000832,measurement device,,A device in which a measure function inheres.,FALSE,,,,,,,,,,,,,,,,,,,,,OBI,,,,,measurement device,,"A ruler, a microarray scanner, a Geiger counter.",,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0000832,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,measurement device,,,,,,,,,,,,,,,,,,,,,,,,,,,,GROUP:OBI Philly workshop,,,,A device in which a measure function inheres.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001171,organism role,,A role which inheres in an organism and is realized by the process of being alive.,FALSE,,,,,,,,,,,,,http://purl.obolibrary.org/obo/COB_0000022,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001171,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,organism role,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A role which inheres in an organism and is realized by the process of being alive.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0011032,Abnormality of fluid regulation,Fluid imbalance|Abnormality of fluid regulation,An abnormality of the regulation of body fluids.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C2364164|SNOMEDCT_US:190902006|SNOMEDCT_US:1860003,,,,,,,,,,,,,,,,,,,,,,,,,Fluid imbalance|Abnormality of fluid regulation,,,,HP:0011032,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormality of fluid regulation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An abnormality of the regulation of body fluids.,,,,,,,,
http://www.ebi.ac.uk/efo/EFO_0009716,age at first facial hair,,The age of onset of first facial hair.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,efo:EFO_0009716,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age at first facial hair,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The age of onset of first facial hair.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001845,NHS standard,,"United Kingdom National Health Service trusts, boards, etc. have some terminology in common for public disclosure of patient health conditions.",FALSE,,,,,,,National Health Service terminology,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001845,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NHS standard,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,https://en.wikipedia.org/wiki/Medical_state,,"United Kingdom National Health Service trusts, boards, etc. have some terminology in common for public disclosure of patient health conditions.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100548,environmental testing sampling,,"A sampling strategy in which environments are sampled in the context of testing for the presence of, or change in the levels of, chemicals, pathogens or other phenomena.",FALSE,,,,,,,Environmental testing,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100548,,,,,,,,,,,,,https://orcid.org/0000-0001-5275-8866,2023-01-23T00:42:19.315Z,,,,,,,,,,,,,,,,,,,environmental testing sampling,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A sampling strategy in which environments are sampled in the context of testing for the presence of, or change in the levels of, chemicals, pathogens or other phenomena.",,,,,,,,
https://w3id.org/linkml/PermissibleValue,PermissibleValue,,"A permissible value, accompanied by intended text and an optional mapping to a concept URI.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,linkml:PermissibleValue,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A permissible value, accompanied by intended text and an optional mapping to a concept URI.",,,,,,,,
http://purl.obolibrary.org/obo/MP_0001867,rhinitis,nasal catarrh,inflammation of the mucous membrane of the nose,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MP:0001113,,nasal catarrh,,,,MP:0001867,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mp.owl,,,,,,,,,rhinitis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,inflammation of the mucous membrane of the nose,,,,,,,,
http://purl.obolibrary.org/obo/MP_0001866,nasal inflammation,,"local accumulation of fluid, plasma proteins, and leukocytes in the proximal portion of the respiratory passages",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MP:0001866,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mp.owl,,,,,,,,,nasal inflammation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"local accumulation of fluid, plasma proteins, and leukocytes in the proximal portion of the respiratory passages",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00004484,veal primal cut,,A cut of meat that is initially separated from the carcass of a veal during butchering.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00004484,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,veal primal cut,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A cut of meat that is initially separated from the carcass of a veal during butchering.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03500040,food-grade glass surface,,A surface made of food-grade glass.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=N0040,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03500040,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food-grade glass surface,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A surface made of food-grade glass.,,,,,,,,
http://purl.obolibrary.org/obo/ERO_0001286,ERO_0001286,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ERO:0001286,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000541,Itsekiri,,A Western African population with a population size of 2.7 Million,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000541,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Itsekiri|Itsekiri,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Western African population with a population size of 2.7 Million,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000543,Dan,,A Mande Western population with a population size of 700000,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000543,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Dan|Dan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Mande Western population with a population size of 700000,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000540,Samoya,,A Gurma population with a population size of 30900,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000540,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Samoya|Samoya,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Gurma population with a population size of 30900,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000546,Krahn,,A Kru population with a population size of 214000,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000546,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Krahn|Krahn,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Kru population with a population size of 214000,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000548,Kulango,,A Western African population with a population size of 311500,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000548,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Kulango|Kulango,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Western African population with a population size of 311500,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000547,Grebo,,A Kru population with a population size of 387000,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000547,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Grebo|Grebo,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Kru population with a population size of 387000,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000542,Bandial,,A Jola population with a population size of 10125,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000542,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Bandial|Bandial,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Jola population with a population size of 10125,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000545,Krio,,A Western African population with a population size of 104311,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000545,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Krio|Krio,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Western African population with a population size of 104311,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000544,Kabye,,A Gurma population with a population size of 1.22 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000544,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Kabye|Kabye,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Gurma population with a population size of 1.22 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000549,Limba,,A Western African population with a population size of 792190,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000549,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Limba|Limba,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Western African population with a population size of 792190,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001608,commensal role,,An organism and its host share physical space but no evidence exists to determine if one benefits from this arrangement.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001608,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,commensal role,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An organism and its host share physical space but no evidence exists to determine if one benefits from this arrangement.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470174,vaccume storage process,,"Storing under reduced pressure (e.g. 1.3-2 kPa) in order to suppress or inhibit undesirable micro organism growth, oxidation activity, etc.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0174,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470174,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,vaccume storage process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Storing under reduced pressure (e.g. 1.3-2 kPa) in order to suppress or inhibit undesirable micro organism growth, oxidation activity, etc.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000041,beef eye of round roast,,A roast cut from the beef eye of round.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000041,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef eye of round roast,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A roast cut from the beef eye of round.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0000970,eye,,An organ that detects light.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Eye|MIAA:0000140|MESH:D005123|MAT:0000140|GAID:69|FBbt:00005162|EV:0100336|EFO:0000827|CALOHA:TS-0309|BTO:0000439|BILA:0000017,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0000970,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,eye,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An organ that detects light.,,,,,,,,
http://www.ebi.ac.uk/efo/EFO_0920034,age at high-grade serous ovarian cancer diagnosis,age at high-grade serous ovarian carcinoma diagnosis,The age at which an individual is diagnosed with high-grade serous ovarian cancer.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,age at high-grade serous ovarian carcinoma diagnosis,,,,efo:EFO_0920034,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age at high-grade serous ovarian cancer diagnosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,AI agent,,,,The age at which an individual is diagnosed with high-grade serous ovarian cancer.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000095,genome annotation algorithm,,Program used for annotation,FALSE,,,,,,,,,,,,,,,,,,,,,GROUP: IRIDA Ontology (Emma),,,,,,,Prokka,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000095,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,,,,,,,genome annotation algorithm,,,,,Assembly QC,,,,,,,,,,,,,,,,,,,,,,Annotation Algorithm,,,Standard Term,,Program used for annotation,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_16449,alanine,,An α-amino acid that consists of propionic acid bearing an amino substituent at position 2.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:2539|CHEBI:22277|CHEBI:13748,,,,,,CHEBI:16449,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,alanine,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An α-amino acid that consists of propionic acid bearing an amino substituent at position 2.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510071,saturated fat-related claim,,"All narrower term definitions extracted from 58 Federal Register 2302, January 6, 1993, part 101.62(c).",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0071,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510071,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,saturated fat-related claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"All narrower term definitions extracted from 58 Federal Register 2302, January 6, 1993, part 101.62(c).",,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0005137,nutritional disorder,nutritional disorder,Any condition related to a disturbance between proper intake and utilization of nourishment.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C3714509|SCTID:2492009|NCIT:C26836|MESH:D009748|MEDGEN:811347|ICD9:783.9|EFO:0001069|DOID:374,,,,,,,,,,,,,,,,,,,,,,,,,nutritional disorder,,,,MONDO:0005137,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#rare_grouping|http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar|http://purl.oboInOwllibrary.org/oboInOwl/mondo#harrisons_view,,,,,,,,nutritional disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any condition related to a disturbance between proper intake and utilization of nourishment.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0013644,duodenal ampulla,duodenal cap viewed radiologically|duodenal cap|bulbus duodeni|bulbus (duodenum)|ampulla of duodenum|ampulla duodeni|ampulla (duodenum),The very first part of the duodenum which is slightly dilated.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Duodenal_cap|SCTID:362149005|FMA:14927,,,,,,,,,,,,,,,,,,,,,,,,,duodenal cap viewed radiologically|duodenal cap|bulbus duodeni|bulbus (duodenum)|ampulla of duodenum|ampulla duodeni|ampulla (duodenum),,,,UBERON:0013644,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,duodenal ampulla,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The very first part of the duodenum which is slightly dilated.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03450002,food cooking,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=G0002,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03450002,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food cooking,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_612,primary immunodeficiency disease,,An immune system disease that results when one or more essential parts of the immune system is missing or not working properly at birth due to a genetic mutation.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:612,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,primary immunodeficiency disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An immune system disease that results when one or more essential parts of the immune system is missing or not working properly at birth due to a genetic mutation.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490296,aluminium foil-paper wrapper,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0296,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490296,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,aluminium foil-paper wrapper,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HP_0100533,Inflammatory abnormality of the eye,Ocular inflammation|Inflammatory abnormality of the eye,"Inflammation of the eye, parts of the eye or the periorbital region.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4020969,,,,,,,,,,,,,,,,,,,,,,,HP:0007891,,Ocular inflammation|Inflammatory abnormality of the eye,,,,HP:0100533,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Inflammatory abnormality of the eye,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Inflammation of the eye, parts of the eye or the periorbital region.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102179,water associated outbreak investigation sampling,,A sampling strategy in which samples are collected in order to research an outbreak which is associated with water.,FALSE,,,,,,,water associated outbreak investigation,,,,,,,,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102179,,,,,,,,,,,,,https://orcid.org/0000-0001-8008-8249,2026-04-13T19:52:38.515Z,,,,,,,,,,,,,,,,,,,water associated outbreak investigation sampling,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A sampling strategy in which samples are collected in order to research an outbreak which is associated with water.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490180,"plastic container, molded or bubble pack",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0180,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490180,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"plastic container, molded or bubble pack",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001543,illness causality,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001543,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,illness causality,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470116,dehydration or drying,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0116,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470116,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,dehydration or drying,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0008250,cardiac stomach,,"In starfishes the cardiac stomach is connected to a pyloric stomach which is located above it. Food can be brought into the stomach through the mouth or, in many species, the cardiac stomach can be extended out through the mouth to digest food outside the body. Suspension-feeding starfish use their tube feet to pass food to the mouth.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,BTO:0002122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0008250,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,cardiac stomach,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"In starfishes the cardiac stomach is connected to a pyloric stomach which is located above it. Food can be brought into the stomach through the mouth or, in many species, the cardiac stomach can be extended out through the mouth to digest food outside the body. Suspension-feeding starfish use their tube feet to pass food to the mouth.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_22507,aminoglycoside antibiotic,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:22507,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,aminoglycoside antibiotic,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001879,significant digits,,"Wikipedia: ""The significant figures of a number are digits that carry meaning contributing to its measurement resolution.""",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001879,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,significant digits,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"Wikipedia: ""The significant figures of a number are digits that carry meaning contributing to its measurement resolution.""",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000246,lamb shoulder blade chop (raw),,A raw lamb shoulder blade chop.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000246,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lamb shoulder blade chop (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw lamb shoulder blade chop.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0000963,categorical label,,A label that is part of a categorical datum and that indicates the value of the data item on the categorical scale.,FALSE,,,,,,,,,,,,,,,,,,,,,Bjoern Peters,,,,,categorical label,,"The labels 'positive' vs. 'negative', or 'left handed', 'right handed', 'ambidexterous', or 'strongly binding', 'weakly binding' , 'not binding', or '+++', '++', '+', '-' etc. form scales of categorical labels.",,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0000963,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,categorical label,,,,,,,,,,,,,,,,,,,,,,,,,,,,Bjoern Peters,,,,A label that is part of a categorical datum and that indicates the value of the data item on the categorical scale.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0060180,colitis,,An inflammatory bowel disease that involves inflammation located_in colon.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0060180,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,colitis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An inflammatory bowel disease that involves inflammation located_in colon.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001974,amplicon strategy,,"Sequencing of overlapping or distinct PCR or RT-PCR products. For example, metagenomic community profiling using SSU rRNA",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI SRA: AMPLICON,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001974,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,amplicon strategy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Sequencing of overlapping or distinct PCR or RT-PCR products. For example, metagenomic community profiling using SSU rRNA",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470131,food chilling,,"Cooling and keeping at a temperature between 30°F and 45°F (-1°C and 7°C). Regarding food preservation regulations, the temperature range depends on national legislation.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0131,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470131,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food chilling,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Cooling and keeping at a temperature between 30°F and 45°F (-1°C and 7°C). Regarding food preservation regulations, the temperature range depends on national legislation.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0101082,Taxonomic identification information field category,,,FALSE,,,,,,,PCDS:taxonomic_identification_information_slot_group,,,,,,,,,,,,,,,,,,,,,,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0101082,,,,,,,,,,,,,,2026-03-29T05:10:44.064Z,,,,,,,,,,,,,,,,,,,Taxonomic identification information field category,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000123,political entity,,A geographical region whose affairs and population are administered by an authority.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,TGN:80002|Geonames:A.PCL|FTT:1093,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00000123,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,political entity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A geographical region whose affairs and population are administered by an authority.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102280,NML data field,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"These metadata entities are defined specifically to describe Public Health Agency of Canada’s (PHAC) National Microbiology Laboratory (NML) data fields. They are organizational constructs intended to support a particular template and underlying database and should not be reused to model metadata outside the intended context. Where possible, more general, template‑independent terms should be used instead.",,,,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102280,,,,,,,,,,,,,,2026-03-19T18:01:00.671Z,,,,,,,,,,,,,,,,,,,NML data field,,,,,,,,,,,,,,,,,,,,,,https://www.canada.ca/en/public-health/programs/national-microbiology-laboratory.html,,,,,,,,,https://github.com/GenEpiO/genepio/issues/111,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00004481,veal roast,,A retail cut of meat from a veal that is of a size for slicing into more than one portion and is suitable for roasting.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00004481,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,veal roast,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A retail cut of meat from a veal that is of a size for slicing into more than one portion and is suitable for roasting.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020150,chicken material,,Material that derives from some chicken.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020150,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,chicken material,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Material that derives from some chicken.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001719,phage type specification,,An integer and character referring to a pattern of opaque or confluent lysis caused by a panel of bacteriophage infections e.g. 14a.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,SNOMED: http://www.snomedbrowser.com/Codes/Details/272405002,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001719,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,phage type specification,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,IRIDA,,An integer and character referring to a pattern of opaque or confluent lysis caused by a panel of bacteriophage infections e.g. 14a.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03430131,whole,,"Refers to natural or formed shape as appropriate, regardless of size, which may vary from very large (e.g., beef carcass) to very small (e.g., poppy seed, yeast cell).",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=E0131,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03430131,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,whole,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Refers to natural or formed shape as appropriate, regardless of size, which may vary from very large (e.g., beef carcass) to very small (e.g., poppy seed, yeast cell).",,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000295,fish hatchery,,A hatchery in which the eggs of fish are hatched under artificial conditions.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Fish_hatchery|FTT:695,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00000295,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,fish hatchery,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A hatchery in which the eggs of fish are hatched under artificial conditions.,,,,,,,,
http://purl.obolibrary.org/obo/COB_0000077,obsolete action specification,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,COB:0000077,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/cob.owl,,,,,,,,,obsolete action specification,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000007,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0010499,pseudostratified ciliated columnar epithelium,epithelium pseudostratificatum columnare ciliatum (trachea et bronchi),"Epithelium composed of a single layer of cells, appearing as layered because the column-shaped cells vary in height so the nuclei are at different levels. The basal portions of all the cells are in contact with the basement membrane. It lines the respiratory system and the male reproductive tract. The cilia in the respiratory tract are motile, while the stereocilia in the male reproductive tract are immobile.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0506992|NCIT:C13181|FMA:13146,,,,,,,,,,,,,,,,,,,,,,,,,epithelium pseudostratificatum columnare ciliatum (trachea et bronchi),,,,UBERON:0010499,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,pseudostratified ciliated columnar epithelium,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Epithelium composed of a single layer of cells, appearing as layered because the column-shaped cells vary in height so the nuclei are at different levels. The basal portions of all the cells are in contact with the basement membrane. It lines the respiratory system and the male reproductive tract. The cilia in the respiratory tract are motile, while the stereocilia in the male reproductive tract are immobile.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0010498,pseudostratified columnar epithelium,,"A simple columnar epithelium that looks stratified but is not, because its cells are arranged with their nuclei at different levels.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Pseudostratified_columnar_epithelium|UMLS:C1514590|UMLS:C0836138|NCIT:C49316|NCIT:C33419|FMA:45572,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0010498,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,pseudostratified columnar epithelium,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A simple columnar epithelium that looks stratified but is not, because its cells are arranged with their nuclei at different levels.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001552,obsolete: household exposure,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,"Found to be redudant with another term, deprecrated in favor of said term.",,,,,,,,,,,,,,,,,,,GENEPIO:0001552,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: household exposure,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,http://purl.obolibrary.org/obo/GENEPIO_0100212,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_3660,wheat allergy,,"A food allergy that develops_from exposure to and particularly consumption of wheat, and has_symptom that are both gastrointestinal and nongastrointestinal in nature, such as diarrhea, mouth and throat irritation, headache, hives, skin rashes, and anaphylaxis.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:3660,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,wheat allergy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A food allergy that develops_from exposure to and particularly consumption of wheat, and has_symptom that are both gastrointestinal and nongastrointestinal in nature, such as diarrhea, mouth and throat irritation, headache, hives, skin rashes, and anaphylaxis.",,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000176,shrubland biome,,"A shrubland biome is a terrestrial biome which includes, across its entire spatial extent, dense groups of shrubs.",FALSE,,,,,,,,,,,,,,Preliminary definition.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01000176,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,shrubland biome,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A shrubland biome is a terrestrial biome which includes, across its entire spatial extent, dense groups of shrubs.",,,,,,,,
http://purl.obolibrary.org/obo/PATO_0000146,temperature,,A physical quality of the thermal energy of a system.,FALSE,,,,,,,,,,,,,,Damion's Note: Future use might prefer: CMO_0000015 body temperature.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PATO:0000146,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/pato.owl,http://purl.oboInOwllibrary.org/oboInOwl/pato#scalar_slim|http://purl.oboInOwllibrary.org/oboInOwl/pato#attribute_slim,,,,,,,,temperature,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A physical quality of the thermal energy of a system.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001057,obsolete: pet food (raw),,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,"Duplicate term, replaced by more appropriate FOODON term, FOODON:00003356",,,,,,,,,,,,,,,,,,,GENEPIO:0001057,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: pet food (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,http://purl.obolibrary.org/obo/FOODON_00003356,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_24868,organic salt,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:24868,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,organic salt,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000457,buffalo round,,"A buffalo cut that comes from the 'round', the rear leg of the buffalo.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000457,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,buffalo round,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A buffalo cut that comes from the 'round', the rear leg of the buffalo.",,,,,,,,
http://purl.obolibrary.org/obo/OBI_0002778,tracheal aspirate specimen,,A specimen that is collected with a suctioning tube from the trachea.,FALSE,,,,,,,tracheal wash specimen,,,,,,,,,,,,,,PMID:25338241,,,,,tracheal aspirate specimen,,,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0002778,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,tracheal aspirate specimen,,,,,,,,,,,,,,,,,,,,,,,,,,,,Asiyah Yu Lin ORCID:0000-0003-2620-0345,,,,A specimen that is collected with a suctioning tube from the trachea.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03450032,heating container,,A food cooking method in which heat is transferred to the outside of a container.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=G0032,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03450032,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,heating container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A food cooking method in which heat is transferred to the outside of a container.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001581,draft NCBI BioSample model - mixed clinical and environmental/food/other,,"Damion's note: There are a few different kinds of biosample, and required fields depend on the type selected.",FALSE,,,,,,,,,,,,,,"Damion's note: There are a few different kinds of biosample, and required fields depend on the type selected.",,,,,,,,,,,"Damion Dooley notes: NCBI doesn't quite make the distinction but it may be helpful to distinguish sample submission facilitator vs submitter/repository organization contact?  So should we have a
BioSample_submission_facilitator field and a BioSample_contact_information field?",,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001581,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,draft NCBI BioSample model - mixed clinical and environmental/food/other,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,http://www.ncbi.nlm.nih.gov/biosample/docs/packages/Pathogen.cl.1.0/|http://www.ncbi.nlm.nih.gov/biosample/docs/attributes/,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001723,culture identifier,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001723,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,culture identifier,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001620,not collected,,A categorical choice recorded when a datum was not measured with respect to some entity during some process.,FALSE,,,,,,,,,,,,,,,,,,,,,https://ena-docs.readthedocs.io/en/latest/submit/samples/missing-values.html,,,,,,,,,,,NCBI Biosample: not collected|http://purl.obolibrary.org/obo/GENEPIO_0001666,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001620,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,not collected,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,INSDC term (lower level),,A categorical choice recorded when a datum was not measured with respect to some entity during some process.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001957,RANDOM PCR method,,Source material was selected by randomly generated primers.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI SRA: RANDOM PCR,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001957,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,RANDOM PCR method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Source material was selected by randomly generated primers.,,,,,,,,
http://purl.obolibrary.org/obo/BTO_0000188,colonic cell line,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,BTO:0000188,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/bto.owl,,,,,,,,,colonic cell line,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000519,agricultural terrace,,A terrace which is used for agricultural activities.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00000519,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,agricultural terrace,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A terrace which is used for agricultural activities.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001821,SNOMEDCT,,SNOMED CT is a large clinical health terminology product owned and distributed by SNOMED International.,FALSE,,,,,,,,,,,,,,,,,,,,,http://www.snomed.org/snomed-ct,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000123,SNOMEDCT,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001821,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SNOMEDCT,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,SNOMED CT is a large clinical health terminology product owned and distributed by SNOMED International.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000316,pork loin back ribs (raw),,Raw pork loin back ribs.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000316,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pork loin back ribs (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Raw pork loin back ribs.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002023,satisfactory health status,,,FALSE,,,,,http://purl.obolibrary.org/obo/GENEPIO_0001841,,,,http://purl.obolibrary.org/obo/GENEPIO_0001847,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002023,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,satisfactory health status,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0016392,mastoid lymph node,retro-auricular node|retro-auricular lymph node|postauricular lymph node|mastoid node,"The mastoid lymph nodes (retroauricular lymph nodes, posterior auricular glands), usually two in number, are situated on the mastoid insertion of the Sternocleidomastoideus, beneath the Auricularis posterior. Their afferent vessels drain the posterior part of the temporoparietal region, the upper part of the cranial surface of the auricula or pinna, and the back of the external acoustic meatus; their efferents pass to the superior deep cervical glands.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Mastoid_lymph_nodes|SCTID:279143009|SCTID:245328002|FMA:61215,,,,,,,,,,,,,,,,,,,,,,,,,retro-auricular node|retro-auricular lymph node|postauricular lymph node|mastoid node,,,,UBERON:0016392,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,mastoid lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The mastoid lymph nodes (retroauricular lymph nodes, posterior auricular glands), usually two in number, are situated on the mastoid insertion of the Sternocleidomastoideus, beneath the Auricularis posterior. Their afferent vessels drain the posterior part of the temporoparietal region, the upper part of the cranial surface of the auricula or pinna, and the back of the external acoustic meatus; their efferents pass to the superior deep cervical glands.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0016393,deep parotid lymph node,deep parotid node,The deep parotid lymph nodes are lymph nodes found below the parotid gland. The afferents of the subparotid glands drain the nasal part of the pharynx and the posterior parts of the nasal cavities. Their efferents pass to the superior deep cervical glands.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Deep_parotid_lymph_nodes|SCTID:279142004|FMA:61218,,,,,,,,,,,,,,,,,,,,,,,,,deep parotid node,,,,UBERON:0016393,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,deep parotid lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The deep parotid lymph nodes are lymph nodes found below the parotid gland. The afferents of the subparotid glands drain the nasal part of the pharynx and the posterior parts of the nasal cavities. Their efferents pass to the superior deep cervical glands.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0016395,infra-auricular lymph node,infra-auricular node|infra-auricular deep parotid node|infra-auricular deep parotid lymph node|infra-auricular deep node,The infra-auricular deep parotid lymph nodes are a group of lymph nodes found underneath the ear.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Infra-auricular_deep_parotid_lymph_nodes|SCTID:22509006|FMA:61220,,,,,,,,,,,,,,,,,,,,,,,,,infra-auricular node|infra-auricular deep parotid node|infra-auricular deep parotid lymph node|infra-auricular deep node,,,,UBERON:0016395,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,infra-auricular lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The infra-auricular deep parotid lymph nodes are a group of lymph nodes found underneath the ear.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0016391,thymic lymph node,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MA:0003118,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0016391,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,thymic lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0016397,submental lymph node,submental node|level Ia neck node,The submental lymph nodes (or suprahyoid) are situated between the anterior bellies of the Digastrici. Their afferents drain the central portions of the lower lip and floor of the mouth and the apex of the tongue. Their efferents pass partly to the submandibular lymph nodes and partly to a gland of the deep cervical group situated on the internal jugular vein at the level of the cricoid cartilage.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Submental_lymph_nodes|SCTID:245318006|FMA:61229,,,,,,,,,,,,,,,,,,,,,,,,,submental node|level Ia neck node,,,,UBERON:0016397,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,submental lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The submental lymph nodes (or suprahyoid) are situated between the anterior bellies of the Digastrici. Their afferents drain the central portions of the lower lip and floor of the mouth and the apex of the tongue. Their efferents pass partly to the submandibular lymph nodes and partly to a gland of the deep cervical group situated on the internal jugular vein at the level of the cricoid cartilage.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0016390,auricular lymph node,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MA:0003092,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0016390,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,auricular lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0016399,lymph node of upper limb,,A lymph node that is part of a forelimb.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SCTID:276155004|FMA:44311,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0016399,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,lymph node of upper limb,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A lymph node that is part of a forelimb.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0016398,lymph node of lower limb,,A lymph node that is part of a hindlimb.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SCTID:361109000|FMA:44310,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0016398,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,lymph node of lower limb,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A lymph node that is part of a hindlimb.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0016394,anterior auricular lymph node,preauricular node|preauricular lymph node|pre-auricular node|pre-auricular lymph node,"The preauricular deep parotid lymph nodes (anterior auricular glands or preauricular glands), from one to three in number, lie immediately in front of the tragus. Their afferents drain the lateral surface of the auricula and the skin of the adjacent part of the temporal region; their efferents pass to the superior deep cervical glands.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Preauricular_deep_parotid_lymph_nodes|SCTID:245327007|NCIT:C103429|FMA:61219,,,,,,,,,,,,,,,,,,,,,,,,,preauricular node|preauricular lymph node|pre-auricular node|pre-auricular lymph node,,,,UBERON:0016394,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,anterior auricular lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The preauricular deep parotid lymph nodes (anterior auricular glands or preauricular glands), from one to three in number, lie immediately in front of the tragus. Their afferents drain the lateral surface of the auricula and the skin of the adjacent part of the temporal region; their efferents pass to the superior deep cervical glands.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0016396,intraglandular lymph node,intraglandular node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:61221,,,,,,,,,,,,,,,,,,,,,,,,,intraglandular node,,,,UBERON:0016396,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,intraglandular lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_1638,central nervous system tuberculosis,,An extrapulmonary tuberculosis that results in formation of tuberculomas located_in brain or located_in spinal cord.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:1638,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,central nervous system tuberculosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An extrapulmonary tuberculosis that results in formation of tuberculomas located_in brain or located_in spinal cord.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490167,laminate tube,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0167,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490167,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,laminate tube,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100550,field experiment sampling,,A sampling strategy in which samples are taken during real-life experiments which test directly whether proposed interventions actually work.,FALSE,,,,,,,Field experiment,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Field_experiment,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100550,,,,,,,,,,,,,https://orcid.org/0000-0001-5275-8866,2023-01-23T00:42:19.315Z|2022-09-23T11:12:34Z,,,,,,,,,,,,,,,,,,,field experiment sampling,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A sampling strategy in which samples are taken during real-life experiments which test directly whether proposed interventions actually work.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100868,varskip-vss2b strategy,VarSkip 2b,An amplicon strategy which targets SARS-CoV-2 and was developed by New England BioLabs using PrimalSeq to reduce effects of variants with the attributes of version 2b.,FALSE,,,,,,,varskip-vss2b|varskip vss2b,,,,,,,,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,VarSkip 2b,,,,GENEPIO:0100868,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2026-04-13T19:52:38.515Z,,,,,,,,,,,,,,,,,,,varskip-vss2b strategy,,,,,,,,,,,,,,,,,,,,,,https://github.com/nebiolabs/VarSkip,,,,,,,,,,An amplicon strategy which targets SARS-CoV-2 and was developed by New England BioLabs using PrimalSeq to reduce effects of variants with the attributes of version 2b.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001803,organization identifier,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001803,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,organization identifier,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HP_0001877,Abnormal erythrocyte morphology,Abnormality of red blood cells|Abnormality of erythrocytes,Any structural abnormality of erythrocytes (red-blood cells).,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4020862|UMLS:C0391870|SNOMEDCT_US:12222001,,,,,,,,,,,,,,,,,,,,,,,HP:0010973,,Abnormality of red blood cells|Abnormality of erythrocytes,,,,HP:0001877,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal erythrocyte morphology,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any structural abnormality of erythrocytes (red-blood cells).,,,,,,,,
http://purl.obolibrary.org/obo/HP_0001871,Abnormality of blood and blood-forming tissues,Hematological abnormality|Haematological abnormality|Abnormality of the hematopoietic system|Abnormality of the haematopoietic system|Abnormality of blood and blood-forming tissues,An abnormality of the hematopoietic system.,FALSE,,,,,,,,,,,,,,"The hematopoietic system comprises the organs that are involved in the production of blood, primarily the bone marrow, spleen, tonsils, and lymph nodes.",,,,,,,,,,,,,,,,,,UMLS:C4020864|UMLS:C0850715|UMLS:C0018939|SNOMEDCT_US:34093004|SNOMEDCT_US:191124002,,,,,,,,,,,,,,,,,,,,,,,HP:0003135,,Hematological abnormality|Haematological abnormality|Abnormality of the hematopoietic system|Abnormality of the haematopoietic system|Abnormality of blood and blood-forming tissues,,,,HP:0001871,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormality of blood and blood-forming tissues,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An abnormality of the hematopoietic system.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0004923,organ component layer,,A part of a wall of an organ that forms a layer.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:82485,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0004923,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,organ component layer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A part of a wall of an organ that forms a layer.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0004921,subdivision of digestive tract,,A proximal-distal subdivision of the digestive tract.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:71131|FBbt:00100315,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0004921,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,subdivision of digestive tract,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A proximal-distal subdivision of the digestive tract.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00000106,"populated place, Haiti",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00000106,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Haiti",http://purl.obolibrary.org/obo/GAZ_00003953,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100075,chronic cough,,"A reflex action of the respiratory tract that is used to clear the upper airways, lasting for more than 8 weeks",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100075,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,chronic cough,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A reflex action of the respiratory tract that is used to clear the upper airways, lasting for more than 8 weeks",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00001950,herring food product,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00001950,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,herring food product,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100939,nucleic acid extraction method,nucleic acid extraction method,A data field which describes the process used to extract nucleic acid material from a sample.,FALSE,,,,,,,PCDS:nucleic_acid_extraction_method,,,,,,,PCDS: Briefly describe the extraction method used.,,,,,,,,,,,Drafted 2023-07-27,,,"PCDS: Direct wastewater RNA capture and purification via the ""Sewage, Salt, Silica and SARS-CoV-2 (4S)"" method v4 found at https://www.protocols.io/view/v-4-direct-wastewater-rna-capture-and-purification-36wgq581ygk5/v4",,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,nucleic acid extraction method,nucleic acid extraction method slot,,,,GENEPIO:0100939,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,nucleic acid extraction method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the process used to extract nucleic acid material from a sample.,,PCDS: The process used to extract genomic material from a sample.,,,,,,
http://purl.obolibrary.org/obo/UBERON_0035809,serous cavity,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SCTID:304404008|FMA:12241,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0035809,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,serous cavity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000548,gravel field,,A field which is composed primarily of gravel.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,TGN:21502|Geonames:L.GVL,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00000548,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,gravel field,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A field which is composed primarily of gravel.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0004432,Illumina NextSeq 1000,,A DNA sequencer which is manufactured by the Illumina corporation using sequence-by-synthesis chemistry that fits on a benchtop and uses P1 and P2 flow cells.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0004432,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-5275-8866,2023-06-21T12:33:56Z,,,,,,,,,,,,,,,,,,,Illumina NextSeq 1000,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A DNA sequencer which is manufactured by the Illumina corporation using sequence-by-synthesis chemistry that fits on a benchtop and uses P1 and P2 flow cells.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03450027,sautéing,,"Cooking in a very small amount of very hot fat, turning and browning the food on all sides.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=G0027,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03450027,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,sautéing,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Cooking in a very small amount of very hot fat, turning and browning the food on all sides.",,,,,,,,
http://purl.obolibrary.org/obo/OBA_2001012,age of onset of type 1 diabetes mellitus,age type 1 diabetes mellitus symptoms begin|age at onset of type 1 diabetes mellitus,The age at which type 1 diabetes mellitus manifestations first appear.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,age type 1 diabetes mellitus symptoms begin|age at onset of type 1 diabetes mellitus,,,,OBA:2001012,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age of onset of type 1 diabetes mellitus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The age at which type 1 diabetes mellitus manifestations first appear.,,,,,,,,
http://edamontology.org/data_2219,database field name,,The name of a field in a database.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,data_2219,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,database field name,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The name of a field in a database.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0030669,Abnormal ocular adnexa morphology,,"A structural anomaly of the adjacent structures (i.e., adnexa) of the eye, defined as the lacrimal apparatus, the extraocular muscles and the eyelids, eyelashes, eyebrows and the conjunctiva.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4073120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0030669,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal ocular adnexa morphology,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A structural anomaly of the adjacent structures (i.e., adnexa) of the eye, defined as the lacrimal apparatus, the extraocular muscles and the eyelids, eyelashes, eyebrows and the conjunctiva.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C25407,Address,physicalAddress|Physical Address|Address,"A standardized representation of the location of a person, business, building, or organization.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,physicalAddress|Physical Address|Address,,,,NCIT:C25407,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Address,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A standardized representation of the location of a person, business, building, or organization.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001110,targeted locus (loci) project,,"Targeted locus (loci): project to sequence specific loci, such as a 16S rRNA sequencing",FALSE,,,,,,,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/books/NBK54364/,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001110,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,targeted locus (loci) project,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"Targeted locus (loci): project to sequence specific loci, such as a 16S rRNA sequencing",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0101102,sequencing flow cell version,,"PCDS: Flow cells can vary in terms of design, chemistry, capacity, etc. The version of the flow cell used to generate sequence data can affect sequence quantity and quality. Record the version of the flow cell used to generate sequence data. Do not include 'version' or 'v' in the version number.",FALSE,,,,,,,PCDS:sequencing_flow_cell_version,,,,,,,"PCDS: Flow cells can vary in terms of design, chemistry, capacity, etc. The version of the flow cell used to generate sequence data can affect sequence quantity and quality. Record the version of the flow cell used to generate sequence data. Do not include 'version' or 'v' in the version number.",,,,,,,,,,,,,,PCDS: R.9.4.1,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0101102,,,,,,,,,,,,,,2026-04-13T17:16:47.336Z,,,,,,,,,,,,,,,,,,,sequencing flow cell version,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PCDS: The version number of the flow cell used for generating sequence data.,,,,,,
http://purl.obolibrary.org/obo/ENVO_00003884,farmyard manure,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00003884,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,farmyard manure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00005387,lamb shoulder roast (boneless),,A roast derived from the shoulder.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00005387,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lamb shoulder roast (boneless),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A roast derived from the shoulder.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00003859,horse manure,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Horse_manure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00003859,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,horse manure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C69218,Pregnancy Status,Pregnancy Status|PREGSTAT,The pregnancy status of an individual.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Pregnancy Status|PREGSTAT,,,,NCIT:C69218,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Pregnancy Status,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The pregnancy status of an individual.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00004487,veal sub-primal cut,,A smaller cut of meat that is obtained from the larger primal cut of a veal.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00004487,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,veal sub-primal cut,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A smaller cut of meat that is obtained from the larger primal cut of a veal.,,,,,,,,
http://purl.obolibrary.org/obo/IDO_0000477,acute infectious disease course,,An infectious disease course that begins soon after infection is established and progresses rapidly to severe stages.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,IDO:0000477,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ido.owl,,,,,,,,,acute infectious disease course,,,,,,,,,,,,,,,,,,,,,,,,,,,,Lindsay Cowell|Alexander Diehl|Albert Goldfain,,,,An infectious disease course that begins soon after infection is established and progresses rapidly to severe stages.,,,,,,,,
http://purl.obolibrary.org/obo/IAO_0000414,mass measurement datum,,A scalar measurement datum that is the result of measurement of mass quality,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,2009/09/28 Alan Ruttenberg. Fucoidan-use-case,,,,,,http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,IAO:0000414,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/iao.owl,,,,,,,,,mass measurement datum,,,,,,,,,,,,,,,,,,,,,,,,,,,,Person:Alan Ruttenberg,,,,A scalar measurement datum that is the result of measurement of mass quality,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020197,piece of chicken organ (raw),,A raw piece of a chicken organ.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020197,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of chicken organ (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw piece of a chicken organ.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001784,symptom duration,,A symptom duration is a date-time entity which is the duration (in hours or days or weeks etc.) that one or more symptoms persist for in a particular human or animal,FALSE,,,,,,,,,,,,,,This may be a calculated field if symptoms are reported to cease on a particular date.  Often however symptom duration is reported more generally as a date or time range since cesation date is less certain.,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001784,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,symptom duration,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A symptom duration is a date-time entity which is the duration (in hours or days or weeks etc.) that one or more symptoms persist for in a particular human or animal,,,,,,,,
http://purl.obolibrary.org/obo/APOLLO_SV_00000017,latent period duration,,A duration of the time interval between the host acquiring an infection and the host bearing a contagiousness disposition during the same disease course within a population of hosts.,FALSE,,,,,,,,,,,,,,The duration of the period between when an organism becomes infected and when it becomes infectious.|MB: In order to get the temporal occupation relations I added properties that I renamed with BFO2 URIs,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,APOLLO_SV:00000017,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/apollo_sv.owl,,,,,,,,,latent period duration,,,,,,,,,,,,,,,,,,,,,,,,,,,,Mathias Brochhausen,,,,A duration of the time interval between the host acquiring an infection and the host bearing a contagiousness disposition during the same disease course within a population of hosts.,,,,,,,,
http://purl.obolibrary.org/obo/APOLLO_SV_00000016,infectious period duration,,A duration of the parts of an infection during which the host bears an infectious disposition in a population of hosts.,FALSE,,,,,,,,,,,,,,MB: In order to get the temporal occupation relations I added properties that I renamed with BFO2 URIs.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,APOLLO_SV:00000016,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/apollo_sv.owl,,,,,,,,,infectious period duration,,,,,,,,,,,,,,,,,,,,,,,,,,,,Mathias Brochhausen,,,,A duration of the parts of an infection during which the host bears an infectious disposition in a population of hosts.,,,,,,,,
http://purl.obolibrary.org/obo/APOLLO_SV_00000019,count of simulated exposed population,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,APOLLO_SV:00000019,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/apollo_sv.owl,,,,,,,,,count of simulated exposed population,,,,,,,,,,,,,,,,,,,,,,,,,,,,Mathias Brochhausen,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0004318,culture plate,,"A low flat-bottomed laboratory container for growing a layer of organisms such as bacteria, molds, and cells on a thin layer of nutrient medium.",FALSE,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Culture_plate,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0004318,,,,,,,,,,,,,,2022-09-23T10:59:09Z,,,,,,,,,,,,,,,,,,,culture plate,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A low flat-bottomed laboratory container for growing a layer of organisms such as bacteria, molds, and cells on a thin layer of nutrient medium.",,,,,,,,
http://purl.obolibrary.org/obo/HP_0002242,Abnormal intestine morphology,Enteropathy|Abnormality of the intestine,An abnormality of the intestine. The closely related term enteropathy is used to refer to any disease of the intestine.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0021831|SNOMEDCT_US:85919009,,,,,,,,,,,,,,,,,,,,,,,HP:0002628,,Enteropathy|Abnormality of the intestine,,,,HP:0002242,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal intestine morphology,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An abnormality of the intestine. The closely related term enteropathy is used to refer to any disease of the intestine.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0002249,Melena,Black feces|Black faeces,"The passage of blackish, tarry feces associated with gastrointestinal hemorrhage. Melena occurs if the blood remains in the colon long enough for it to be broken down by colonic bacteria. One degradation product, hematin, imbues the stool with a blackish color. Thus, melena generally occurs with bleeding from the upper gastrointestinal tract (e.g., stomach ulcers or duodenal ulcers), since the blood usually remains in the gut for a longer period of time than with lower gastrointestinal bleeding.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0474585|UMLS:C0025222|SNOMEDCT_US:35064005|SNOMEDCT_US:2901004|SNOMEDCT_US:269899009|SNOMEDCT_US:267055007|SNOMEDCT_US:249627005,,,,,,,,,,,,,,,,,,,,,,,,,,Black feces|Black faeces,,,HP:0002249,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Melena,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The passage of blackish, tarry feces associated with gastrointestinal hemorrhage. Melena occurs if the blood remains in the colon long enough for it to be broken down by colonic bacteria. One degradation product, hematin, imbues the stool with a blackish color. Thus, melena generally occurs with bleeding from the upper gastrointestinal tract (e.g., stomach ulcers or duodenal ulcers), since the blood usually remains in the gut for a longer period of time than with lower gastrointestinal bleeding.",,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000085,effect size estimate,,"effect size estimate is a data item about the direction and strength of the consequences of a causative agent as explored by statistical methods. Those methods produce estimates of the effect size, e.g. confidence interval",FALSE,,,,,,,,,,,,,,,,,,,,,"AGB,PRS",,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000085,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,effect size estimate,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra|Alejandra Gonzalez-Beltran|Orlaith Burke,,,,"effect size estimate is a data item about the direction and strength of the consequences of a causative agent as explored by statistical methods. Those methods produce estimates of the effect size, e.g. confidence interval",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020275,piece of chicken breast (skinless),,A piece of skinless chicken breast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020275,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of chicken breast (skinless),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A piece of skinless chicken breast.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001905,points in 2 dimensions,,A set of points that exist in a 2-dimensional plane. (This plane may be a cross-section of points defined in n > 2 dimensions).,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0001856,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001905,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,points in 2 dimensions,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A set of points that exist in a 2-dimensional plane. (This plane may be a cross-section of points defined in n > 2 dimensions).,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000151,bioinformatics pipeline name,,A laboratory sequencing datum which describes the name of the bioinformatics pipeline used.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000151,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,bioinformatics pipeline name,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A laboratory sequencing datum which describes the name of the bioinformatics pipeline used.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C120592,Very Early Neonatal Death,Very Early Neonatal Death,Death of a live newborn during the first 24 hours of life,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Very Early Neonatal Death,,,,NCIT:C120592,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Very Early Neonatal Death,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Death of a live newborn during the first 24 hours of life,,,,,,,,
http://purl.obolibrary.org/obo/DOID_13622,campylobacteriosis,,"A primary bacterial infectious disease that results_in infection located_in intestine, has_material_basis_in Campylobacter jejuni, which is transmitted_by ingestion of contaminated food or water or transmitted_by contact with infected people or animals. The infection has_symptom diarrhea or has_symptom dysentery, has_symptom abdominal cramps and pain, and has_symptom fever.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:13622,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,campylobacteriosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A primary bacterial infectious disease that results_in infection located_in intestine, has_material_basis_in Campylobacter jejuni, which is transmitted_by ingestion of contaminated food or water or transmitted_by contact with infected people or animals. The infection has_symptom diarrhea or has_symptom dysentery, has_symptom abdominal cramps and pain, and has_symptom fever.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C50620,Intrauterine Fetal Death,Intrauterine Fetal Death|IUD|INTRAUTERINE DEATH|Fetal death|Fetal Demise|Fetal Death,Death of a fetus after 10 weeks gestation.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Intrauterine Fetal Death|IUD|INTRAUTERINE DEATH|Fetal death|Fetal Demise|Fetal Death,,,,NCIT:C50620,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Intrauterine Fetal Death,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Death of a fetus after 10 weeks gestation.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100050,subject age at time of specimen collection bin (10 - 19),,An age group that stratifies the age of a case to be between 10 to 19 years old (inclusive).,FALSE,,,,,,,10 - 19,,,,,,,,,,,,,,,,,,,,,,,,ready for release,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100050,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,subject age at time of specimen collection bin (10 - 19),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An age group that stratifies the age of a case to be between 10 to 19 years old (inclusive).,,,,,,,,
http://purl.obolibrary.org/obo/OMIT_0004227,Chronic Disease,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OMIT:0004227,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/omit.owl,,,,,,,,,Chronic Disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_3480,cefamandole,,A cephalosporin compound having (<i>R</i>)-mandelamido and <em>N</em>-methylthiotetrazole side-groups.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:3480,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,cefamandole,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A cephalosporin compound having (<i>R</i>)-mandelamido and <em>N</em>-methylthiotetrazole side-groups.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_3485,cefdinir,,A cephalosporin compound having 7β-2-(2-amino-thiazol-4-yl)-2-[(Z)-hydroxyimino]-acetylamino- and 3-vinyl side groups.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:184624,,,,,,CHEBI:3485,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,cefdinir,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A cephalosporin compound having 7β-2-(2-amino-thiazol-4-yl)-2-[(Z)-hydroxyimino]-acetylamino- and 3-vinyl side groups.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_3489,cefmetazole,,"A second-generation cephalosporin antibiotic having <em>N</em><small><sup>1</small></sup>-methyltetrazol-5-ylthiomethyl, {[(cyanomethyl)sulfanyl]acetyl}amino and methoxy side-groups at positions 3, 7β and 7α respectively of the parent cephem bicyclic structure.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:3489,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,cefmetazole,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A second-generation cephalosporin antibiotic having <em>N</em><small><sup>1</small></sup>-methyltetrazol-5-ylthiomethyl, {[(cyanomethyl)sulfanyl]acetyl}amino and methoxy side-groups at positions 3, 7β and 7α respectively of the parent cephem bicyclic structure.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530214,hydroponic cultivation,,"A method of growing plants, usually crops, without soil, by using mineral nutrient solutions in an aqueous solvent.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0214,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530214,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,hydroponic cultivation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A method of growing plants, usually crops, without soil, by using mineral nutrient solutions in an aqueous solvent.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100574,low signal to noise ratio datum,,A data item that describes sequence data containing more errors or undetermined bases (noise) than sequence representing the biological source (signal).,FALSE,,,,,,,low signal to noise ratio,,,,,,,,,,,,,,,,,,,,,,,,ready for release,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100574,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-1107-9135,2023-01-23T00:42:19.315Z,,,,,,,,,,,,,,,,,,,low signal to noise ratio datum,,,,,,,,,,,,,,,,,,,,,,The PHA4GE QC Contextual Data Tags Specification: https://github.com/pha4ge/contextual-data-qc-tags,,,,,,,,,,A data item that describes sequence data containing more errors or undetermined bases (noise) than sequence representing the biological source (signal).,,,,,,,,
http://www.ebi.ac.uk/efo/EFO_0004952,disease recurrence,relapse,The recurrence of a disease after treatment,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MedDRA:10061819,,,,,,,,,,,,,,,,,,,,,,,,,relapse,,,,efo:EFO_0004952,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,disease recurrence,,,,,,,,,,,,,,,,,,,,,,,,,,,,Helen Parkinson,,,,The recurrence of a disease after treatment,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000257,lamb shank half (raw),,A raw lamb shank half cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000257,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lamb shank half (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw lamb shank half cut.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C215596,Assigned Person Name,Assigned Person Name,"The literal identifier (i.e., distinctive designation) of the assigned person.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Assigned Person Name,,,,NCIT:C215596,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Assigned Person Name,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The literal identifier (i.e., distinctive designation) of the assigned person.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001691,listeria serotype 1/2a,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001691,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,listeria serotype 1/2a,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_197,Campylobacter jejuni,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,Campylobacter jejuni,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:197,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Campylobacter jejuni,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://www.ebi.ac.uk/efo/EFO_0005602,age at alcohol diagnosis,,The age at which an alcohol diagnosis was made in a human patient,FALSE,,,,,,,,,,,,,,The age at which an alcohol diagnosis was made in a human patient,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,efo:EFO_0005602,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age at alcohol diagnosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,Helen Parkinson,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GSSO_000132,gender nonbinary,gender non-binary,"Either, a specific gender identity which is not male or female; or, more broadly, an umbrella term for gender identities not considered male or female.",FALSE,,,,,,,,,,,,,,"Note that ""nonbinary"" as itself is preferable if the context in relationship to gender is known. Most therefore ""nonbinary persons"" not ""gender nonbinary persons"" can be used.|""Non-binary"" (with the hyphen) is more common in the United Kingdom, whereas ""nonbinary"" (as one word) is more common in the United States.",,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Category:Non-binary_gender,,,,,,,,,,,,,,,,,,,,,,,,,gender non-binary,,,,GSSO:000132,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gsso.owl,,,,,,,,,gender nonbinary,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Either, a specific gender identity which is not male or female; or, more broadly, an umbrella term for gender identities not considered male or female.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510122,unpurified or unrefined claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510122,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,unpurified or unrefined claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C15632,Chemotherapy,"chemotherapy|Chemotherapy, Cancer, General|Chemotherapy (NOS)|Chemotherapy|Chemo|CHEMOTHERAPY|CHEMO",The use of synthetic or naturally-occurring chemicals for the treatment of diseases.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"chemotherapy|Chemotherapy, Cancer, General|Chemotherapy (NOS)|Chemotherapy|Chemo|CHEMOTHERAPY|CHEMO",,,,NCIT:C15632,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Chemotherapy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The use of synthetic or naturally-occurring chemicals for the treatment of diseases.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001198,purpose of sampling,purpose_of_sampling|purpose of sampling,A data field which describes the reason that the sample was collected.,FALSE,,,,,,,PCDS:purpose_of_sampling,,,,,,,PCDS: Select a value from the pick list in the template.,,,,,,,,,,,,,,PCDS: Diagnostic testing,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,purpose_of_sampling|purpose of sampling,purpose of sampling slot,,,,GENEPIO:0001198,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,purpose of sampling,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the reason that the sample was collected.,,PCDS: The reason that the sample was collected.,,,,,,
http://purl.obolibrary.org/obo/HP_0030972,Abnormal systemic blood pressure,Abnormal systemic BP,A chronic deviation from normal pressure in the systemic arterial system.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Abnormal systemic BP,,,,HP:0030972,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal systemic blood pressure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A chronic deviation from normal pressure in the systemic arterial system.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_134958,thioacetazone,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:134958,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,thioacetazone,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HP_0011729,Abnormality of joint mobility,,An abnormality in the range and ease of motion of joints across their normal range.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4023216,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0011729,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormality of joint mobility,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An abnormality in the range and ease of motion of joints across their normal range.,,,,,,,,
http://purl.obolibrary.org/obo/CHMO_0002743,CHMO_0002743,,"""This observable is important where process of capturing sample can affect dna extraction.""",FALSE,,,,,,,,,,,,,,"""This observable is important where process of capturing sample can affect dna extraction.""",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHMO:0002743,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,specimen extraction matrix,,,,
http://www.ebi.ac.uk/efo/EFO_0021782,age at initiation of oral contraceptive pill use,,Age at initiation of the use of an oral contraceptive pill.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,efo:EFO_0021782,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age at initiation of oral contraceptive pill use,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Age at initiation of the use of an oral contraceptive pill.,,,,,,,,
http://purl.obolibrary.org/obo/UO_1000019,angstrom based unit,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:1000019,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,angstrom based unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UO_1000010,second based unit,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:1000010,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,second based unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UO_1000012,kelvin based unit,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:1000012,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,kelvin based unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UO_1000013,mole based unit,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:1000013,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,mole based unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C191539,Death due to Stroke Related to COVID-19,Death due to stroke|Death due to Stroke Related to COVID-19,Death following a stroke that is either a direct consequence of the stroke or a complication of the stroke in a patient with probable or confirmed acute COVID-19.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Death due to stroke|Death due to Stroke Related to COVID-19,,,,NCIT:C191539,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Death due to Stroke Related to COVID-19,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Death following a stroke that is either a direct consequence of the stroke or a complication of the stroke in a patient with probable or confirmed acute COVID-19.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C191538,Death due to Pulmonary Embolus Related to COVID-19,Death due to pulmonary embolus|Death due to Pulmonary Embolus Related to COVID-19,Death as a consequence of pulmonary embolism in a patient with probable or confirmed acute COVID-19.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Death due to pulmonary embolus|Death due to Pulmonary Embolus Related to COVID-19,,,,NCIT:C191538,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Death due to Pulmonary Embolus Related to COVID-19,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Death as a consequence of pulmonary embolism in a patient with probable or confirmed acute COVID-19.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C191537,Death due to Heart Failure Related to COVID-19,Death due to Heart Failure Related to COVID-19|Death due to HF,Death in association with clinically worsening symptoms or signs of heart failure regardless of etiology in a patient with probable or confirmed acute COVID-19.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Death due to Heart Failure Related to COVID-19|Death due to HF,,,,NCIT:C191537,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Death due to Heart Failure Related to COVID-19,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Death in association with clinically worsening symptoms or signs of heart failure regardless of etiology in a patient with probable or confirmed acute COVID-19.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490145,plastic boil-in-bag,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0145,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490145,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,plastic boil-in-bag,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_474053,cefazolin,,"A first-generation cephalosporin compound having [(5-methyl-1,3,4-thiadiazol-2-yl)sulfanyl]methyl and (1<em>H</em>-tetrazol-1-ylacetyl)amino side-groups at positions 3 and 7 respectively.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:3482,,,,,,CHEBI:474053,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,cefazolin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A first-generation cephalosporin compound having [(5-methyl-1,3,4-thiadiazol-2-yl)sulfanyl]methyl and (1<em>H</em>-tetrazol-1-ylacetyl)amino side-groups at positions 3 and 7 respectively.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100526,AMR laboratory typing method,antimicrobial resistance laboratory typing method|AMR_laboratory_typing_method|AMR laboratory typing method,An antimicrobial resistance (AMR) field which describes the general method used for antibiotic susceptibility testing.,FALSE,,,,,,,PCDS:amr_laboratory_typing_method|PCDS:*_laboratory_typing_method,,,,,,,PCDS: Select a typing method from the pick list provided. Use the Term Request System to request the addition of other methods if necessary.,,,,,,,,,,,,,,PCDS: Broth dilution [ARO:3004397],,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,antimicrobial resistance laboratory typing method|AMR_laboratory_typing_method|AMR laboratory typing method,antimicrobial resistance laboratory typing method slot|antimicrobial resistance laboratory typing method field|AMR laboratory typing method slot,,,,GENEPIO:0100526,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-12-22T00:55:53.808Z,,,,,,,,,,,,,,,,,,,AMR laboratory typing method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An antimicrobial resistance (AMR) field which describes the general method used for antibiotic susceptibility testing.,,PCDS: The general method used for antibiotic susceptibility testing.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0004522,box corer,,A specimen collection device that is used to collect soft sediments in lakes or oceans.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0004522,,,,,,,,,,,,,https://orcid.org/0000-0001-5275-8866,2023-11-29T14:18:43Z,,,,,,,,,,,,,,,,,,,box corer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A specimen collection device that is used to collect soft sediments in lakes or oceans.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02021758,pork steak (raw),,A raw pork steak.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02021758,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pork steak (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw pork steak.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001587,single cell,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001587,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,single cell,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://www.ebi.ac.uk/efo/EFO_0004847,age at onset,,"The age at which some process, or disease started in a human individual.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,efo:EFO_0004847,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age at onset,,,,,,,,,,,,,,,,,,,,,,,,,,,,Helen Parkinson,,,,"The age at which some process, or disease started in a human individual.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0015925,superficial intraparotid lymph node,superficial intraparotid node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SCTID:68339009,,,,,,,,,,,,,,,,,,,,,,,,,superficial intraparotid node,,,,UBERON:0015925,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,superficial intraparotid lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0015926,cranial deep lymph node,cranial deep node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,cranial deep node,,,,UBERON:0015926,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,cranial deep lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0015923,superficial parotid lymph node,superficial parotid node,A parotid lymph node that is located superficially.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Superficial_parotid_lymph_nodes|SCTID:279141006|FMA:61217,,,,,,,,,,,,,,,,,,,,,,,,,superficial parotid node,,,,UBERON:0015923,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,superficial parotid lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A parotid lymph node that is located superficially.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0015922,accessory mandibular lymph node,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0015922,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,accessory mandibular lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490289,"aluminium box, varnished",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0289,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490289,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"aluminium box, varnished",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C25499,Event,Event,Something that happens at a given place and time.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Event,,,,NCIT:C25499,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Event,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Something that happens at a given place and time.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490378,polyvinyl chloride container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0378,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490378,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,polyvinyl chloride container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HP_0034754,Bilious emesis,,"Vomiting whereby the vomit has the color of bile, yellowish-green.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0034754,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Bilious emesis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Vomiting whereby the vomit has the color of bile, yellowish-green.",,,,,,,,
http://purl.obolibrary.org/obo/HP_0034753,Positive Murphy sign,Sweeney's sign|Murphy's sign positive|Murphy's sign,"Murphy's sign is elicited in patients with acute cholecystitis by asking the patient to take in and hold a deep breath while palpating the subcostal region. In practice, Murphy's sign is performed by palpating the subcostal region during inspiration. If pain is elicited and the patient suddenly stops their inspiratory effort, a positive Murphy's sign has been elicited.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Sweeney's sign|Murphy's sign positive|Murphy's sign,,,,HP:0034753,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Positive Murphy sign,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Murphy's sign is elicited in patients with acute cholecystitis by asking the patient to take in and hold a deep breath while palpating the subcostal region. In practice, Murphy's sign is performed by palpating the subcostal region during inspiration. If pain is elicited and the patient suddenly stops their inspiratory effort, a positive Murphy's sign has been elicited.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02021240,lamb sub-primal cut (raw),,A raw lamb sub-primal cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02021240,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lamb sub-primal cut (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw lamb sub-primal cut.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002021,treated and released (not admitted to hospital),,Received treatment but not admitted.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,http://purl.obolibrary.org/obo/GENEPIO_0001837,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002021,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,treated and released (not admitted to hospital),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Received treatment but not admitted.,,,,,,,,
http://purl.obolibrary.org/obo/OMIT_0008013,Hydrotherapy,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OMIT:0008013,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/omit.owl,,,,,,,,,Hydrotherapy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002072,last resort antibiotic,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002072,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,last resort antibiotic,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000070,human construction,constructed feature,A construction that has been assembled by deliberate human effort.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,constructed feature,,,,ENVO:00000070,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,human construction,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A construction that has been assembled by deliberate human effort.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_03501135,acute care facility,acute care center|ACF|ACC,A healthcare facility which is used for short-term patient care.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,acute care center|ACF|ACC,,,,ENVO:03501135,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,acute care facility,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A healthcare facility which is used for short-term patient care.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000296,ribeye chop,,A pork loin chop that is derived from the center cut rib section of the loin.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000296,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,ribeye chop,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A pork loin chop that is derived from the center cut rib section of the loin.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02021263,piece of sheep,,A severed part of a sheep.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02021263,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of sheep,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A severed part of a sheep.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03480013,packed in lightly sweetened water or juice,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=K0013,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03480013,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,packed in lightly sweetened water or juice,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020018,"animal breast (with skin, raw)",,A raw animal breast that contains skin.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020018,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"animal breast (with skin, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw animal breast that contains skin.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102187,18S ribosomal gene sequencing assay,,An amplicon sequencing assay in which the amplicon is derived from universal primers used to amplify the 18S ribosomal RNA gene from isolate bacterial genomic DNA or metagenomic DNA from a microbioal community. Resulting sequences are compared to reference 18S sequence databases to identify or classify bacteria present within a given sample.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102187,,,,,,,,,,,,,,2026-04-13T19:52:38.515Z,,,,,,,,,,,,,,,,,,,18S ribosomal gene sequencing assay,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An amplicon sequencing assay in which the amplicon is derived from universal primers used to amplify the 18S ribosomal RNA gene from isolate bacterial genomic DNA or metagenomic DNA from a microbioal community. Resulting sequences are compared to reference 18S sequence databases to identify or classify bacteria present within a given sample.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102202,gene copies per liter,,A concentration unit that measures the number of copies of a given gene within a liter of a biological material.,FALSE,,,,,,,GC/L,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102202,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2026-04-13T19:52:38.515Z,,,,,,,,,,,,,,,,,,,gene copies per liter,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A concentration unit that measures the number of copies of a given gene within a liter of a biological material.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100780,presampling weather conditions,presampling weather conditions,An environmental data field which describes the weather conditions prior to collection that may affect the sample.,FALSE,,,,,,,PCDS:presampling_weather_conditions,,,,,,,PCDS: Provide the weather conditions prior to sample collection.,,,,,,,,,,,,,,PCDS: Drizzle,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,presampling weather conditions,presampling weather conditions slot,,,,GENEPIO:0100780,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,presampling weather conditions,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the weather conditions prior to collection that may affect the sample.,,PCDS: Weather conditions prior to collection that may affect the sample.,,,,,,
http://purl.obolibrary.org/obo/UBERON_0012308,superficial lateral cervical lymph node,superficial lateral cervical node,The superficial lateral cervical lymph nodes are found in proximity to the external jugular vein.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Superficial_lateral_cervical_lymph_nodes|SCTID:50679006|FMA:12769,,,,,,,,,,,,,,,,,,,,,,,,,superficial lateral cervical node,,,,UBERON:0012308,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,superficial lateral cervical lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The superficial lateral cervical lymph nodes are found in proximity to the external jugular vein.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0012309,superficial anterior cervical lymph node,anterior jugular lymph node,The superficial anterior cervical lymph nodes are found in proximity to the anterior jugular vein.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Superficial_anterior_cervical_lymph_nodes|SCTID:22993006|FMA:12776,,,,,,,,,,,,,,,,,,,,,,,,,anterior jugular lymph node,,,,UBERON:0012309,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,superficial anterior cervical lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The superficial anterior cervical lymph nodes are found in proximity to the anterior jugular vein.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0012307,anterior cervical lymph node,anterior cervical node,The anterior cervical lymph nodes are a group of nodes found on the anterior part of the neck.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Anterior_cervical_lymph_nodes|SCTID:168259009|FMA:61230,,,,,,,,,,,,,,,,,,,,,,,,,anterior cervical node,,,,UBERON:0012307,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,anterior cervical lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The anterior cervical lymph nodes are a group of nodes found on the anterior part of the neck.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0012306,lateral cervical lymph node,lateral cervical node,A cervical lymph nodes are found in proximity to an internal or external jugular vein.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SCTID:167763000|FMA:61232,,,,,,,,,,,,,,,,,,,,,,,,,lateral cervical node,,,,UBERON:0012306,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,lateral cervical lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A cervical lymph nodes are found in proximity to an internal or external jugular vein.,,,,,,,,
http://purl.obolibrary.org/obo/OMIT_0019458,Clinical Laboratory Techniques,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OMIT:0019458,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/omit.owl,,,,,,,,,Clinical Laboratory Techniques,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000362,veal foreshank,,A veal primal cut that is the foreleg portion from the chuck.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000362,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,veal foreshank,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A veal primal cut that is the foreleg portion from the chuck.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00005398,lamb loin saddle (raw),,A raw lamb loin saddle cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00005398,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lamb loin saddle (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw lamb loin saddle cut.,,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000677,hazard ratio,,A measure of association that is the ratio of the hazard rate of an event in one group to the hazard rate of the same event in another group.,FALSE,,,,,,,,,,,,,,,,,,,,,"NCIt:
Hazard ratio = A measure of how often a particular event happens in one group compared to how often it happens in another group, over time. In cancer research, hazard ratios are often used in clinical trials to measure survival at any point in time in a group of patients who have been given a specific treatment compared to a control group given another treatment or a placebo. A hazard ratio of one means that there is no difference in survival between the two groups. A hazard ratio of greater than one or less than one means that survival was better in one of the groups.

https://www.statisticshowto.com/hazard-ratio/
The hazard ratio is a comparison between the probability of events in a treatment group, compared to the probability of events in a control group.

Hazard Ratio in Clinical Trials (https://www.ncbi.nlm.nih.gov/pmc/articles/PMC478551/)
The hazard ratio is an estimate of the ratio of the hazard rate in the treated versus the control group. The hazard rate is the probability that if the event in question has not already occurred, it will occur in the next time interval, divided by the length of that interval. The time interval is made very short, so that in effect the hazard rate represents an instantaneous rate.

The Hazards of Hazard Ratios (https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3653612/)
The hazard ratio (HR) is the main, and often the only, effect measure reported in many epidemiologic studies. For dichotomous, non–time-varying exposures, the HR is defined as the hazard in the exposed groups divided by the hazard in the unexposed groups. For all practical purposes, hazards can be thought of as incidence rates and thus the HR can be roughly interpreted as the incidence rate ratio. The HR is commonly and conveniently estimated via a Cox proportional hazards model, which can include potential confounders as covariates.",,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000677,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,hazard ratio,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Brian S. Alper, Kenneth Wilkins, Joanne Dehnbostel, Muhammad Afzal",,,,A measure of association that is the ratio of the hazard rate of an event in one group to the hazard rate of the same event in another group.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001419,host role,host role,A data field which describes the role of the host in relation to the exposure setting.,FALSE,,,,,,,PCDS:host_role,,,,,,,"PCDS: Select the host's personal role(s) from the pick list provided in the template. If the desired term is missing, contact the curation team.",,,,,,,,,,,,,,PCDS: Patient,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,host role,host role slot,,,,GENEPIO:0001419,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,host role,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the role of the host in relation to the exposure setting.,,PCDS: The role of the host in relation to the exposure setting.,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000139,irrigation ditch,canal,A ditch that supplies water to surrounding land.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Geonames:H.DTCHI|FTT:406|FTT:129,,,,,,,,,,,,,,,,,,,,,,,,canal,,,,,ENVO:00000139,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,irrigation ditch,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A ditch that supplies water to surrounding land.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100293,variant designation (SARS-CoV-2),,"An infection detail datum which is used for classifying a variant of the Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2), determined by the risk it poses based on available scientific evidence.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100293,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,variant designation (SARS-CoV-2),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An infection detail datum which is used for classifying a variant of the Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2), determined by the risk it poses based on available scientific evidence.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102290,Vela sequencing instrument model,,A DNA sequencer manufactured by Vela Diagnostics.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102290,,,,,,,,,,,,,https://orcid.org/0000-0002-7654-6902|https://orcid.org/0000-0001-8008-8249,2026-03-30T14:26:04.627Z,,,,,,,,,,,,,,,,,,,Vela sequencing instrument model,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A DNA sequencer manufactured by Vela Diagnostics.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000017,sand,,Particulate environmental material which is composed primarily of particles of sand with only minor proportions of other substances.,FALSE,,,,,,,,,,,,,,"This definition is intentionally ambiguous to support the multiple thresholds set by different authorities. Some authorities consider as sands soil material that contains 85% or more sand; the percentage of silt plus 1.5 times the percentage of clay does not exceed 15. coarse sand (sable grossier) 25% or more very coarse and coarse sand, and less than 50% any other one grade of sand.",,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Sand|SWEETRealm:Sand|LTER:484|EcoLexicon:sand,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01000017,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,sand,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Particulate environmental material which is composed primarily of particles of sand with only minor proportions of other substances.,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0020753,Orthocoronavirinae infectious disease,coronavirus infectious disease,"Infectious disease causes by viruses in the subfamily Orthocoronavirinae (coronaviruses). In humans, coronaviruses cause respiratory tract infections that can be mild, such as some cases of the common cold (among other possible causes, predominantly rhinoviruses), and others that can be lethal, such as SARS, MERS, and COVID-19.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0080599,,,,,,,,,,,,,,,,,,,,,,,,,coronavirus infectious disease,,,,MONDO:0020753,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,,,,,,,,,Orthocoronavirinae infectious disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Infectious disease causes by viruses in the subfamily Orthocoronavirinae (coronaviruses). In humans, coronaviruses cause respiratory tract infections that can be mild, such as some cases of the common cold (among other possible causes, predominantly rhinoviruses), and others that can be lethal, such as SARS, MERS, and COVID-19.",,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00003751,"populated place, Bangladesh",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00003751,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Bangladesh",http://purl.obolibrary.org/obo/GAZ_00003750,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00003757,"populated place, Viet Nam",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00003757,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Viet Nam",http://purl.obolibrary.org/obo/GAZ_00003756,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0001615,investigation description,,A textual entity that describes an investigation.,FALSE,,,,,,,,,,,,,http://purl.obolibrary.org/obo/OBI_0000066,,,,,,,,NIAID GSCID-BRC metadata working group,,,,,investigation description,,,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0001615,,,,,,,,,,,,,,,,,,,,,,,,,NCBI BioProject,,http://purl.obolibrary.org/obo/OBI_0000066,,,,,,investigation description,,,http://purl.obolibrary.org/obo/GENEPIO_0001836|http://purl.obolibrary.org/obo/GENEPIO_0000112,,,,project description,,,,,,,,,,,,,,,,,,,,,"Person: Chris Stoeckert, Jie Zheng",,,,A textual entity that describes an investigation.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530138,semelle,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0138,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530138,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,semelle,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020149,chicken food product,,A food product that is derived from some chicken.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020149,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,chicken food product,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A food product that is derived from some chicken.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490218,jug or demijohn,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0218,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490218,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,jug or demijohn,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000010,beef bottom round roast (boneless),,A boneless beef bottom round roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000010,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef bottom round roast (boneless),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A boneless beef bottom round roast.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000328,kilo base pair,kilobasepair|kbp,A unit equal to one thousand base pairs.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,kilobasepair|kbp,,,,UO:0000328,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,kilo base pair,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A unit equal to one thousand base pairs.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000326,centiMorgan,cM,"A unit used to express distances on a genetic map. In genetic mapping, distances between markers are determined by measuring the rate of meoitic recombination between them, which increases proportionately with the distance separating them. A cM is defined as the length of an interval in which there is a 1% probability of recombination. On the average, 1 cM is roughly equivalent to 1 megabase (Mb) of DNA, although this can vary widely due to hot and cold spots of recombination.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,cM,,,,UO:0000326,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,centiMorgan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A unit used to express distances on a genetic map. In genetic mapping, distances between markers are determined by measuring the rate of meoitic recombination between them, which increases proportionately with the distance separating them. A cM is defined as the length of an interval in which there is a 1% probability of recombination. On the average, 1 cM is roughly equivalent to 1 megabase (Mb) of DNA, although this can vary widely due to hot and cold spots of recombination.",,,,,,,,
http://purl.obolibrary.org/obo/UO_0000329,mega base pair,megabasepair|Mb,A unit equal to one million base pairs,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,megabasepair|Mb,,,,UO:0000329,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,mega base pair,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A unit equal to one million base pairs,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000327,centiRay,cR,"A unit of genetic map distance defined corresponding to an interval in which there is a 1% probability of X-irradiation induced breakage. To be completely specified, the unit must be qualified by the radiation in dosage in rads (e.g. cR8000), because this determines the actual breakage probability.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,cR,,,,UO:0000327,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,centiRay,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A unit of genetic map distance defined corresponding to an interval in which there is a 1% probability of X-irradiation induced breakage. To be completely specified, the unit must be qualified by the radiation in dosage in rads (e.g. cR8000), because this determines the actual breakage probability.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001702,non-monocytogenes listeria antigen,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001702,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,non-monocytogenes listeria antigen,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490127,"laminate tube, unlined aluminum ends",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0127,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490127,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"laminate tube, unlined aluminum ends",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530125,flanchet,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0125,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530125,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,flanchet,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100812,total phosphorus (TP) measurement unit,total phosphorus (TP) measurement unit,An environmental data field which describes the units of a measurement of total phosphorus (TP).,FALSE,,,,,,,PCDS:total_phosphorus_tp_measurement_unit,,,,,,,PCDS: Provide the units of the measured TP.,,,,,,,,,,,,,,PCDS: milligrams orthophosphate as phosphorus per liter (mg PO4-P/L),,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,total phosphorus (TP) measurement unit,total phosphorus (TP) measurement unit slot,,,,GENEPIO:0100812,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,total phosphorus (TP) measurement unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the units of a measurement of total phosphorus (TP).,,PCDS: The units of a measurement of total phosphorus (TP).,,,,,,
http://purl.obolibrary.org/obo/UBERON_0035219,parasternal lymph node,parasternal node|nodus parasternale|internal mammary lymph node,"Any of the lymph nodes of the breast located under the ribcage, near the sternum.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Parasternal_lymph_nodes|UMLS:C0229755|SCTID:421997006|NCIT:C32853|FMA:5849,,,,,,,,,,,,,,,,,,,,,,,,,parasternal node|nodus parasternale|internal mammary lymph node,,,,UBERON:0035219,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,parasternal lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Any of the lymph nodes of the breast located under the ribcage, near the sternum.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_63563,oligosaccharide derivative,,A carbohydrate derivative that is formally obtained from an oligosaccharide.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:63563,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,oligosaccharide derivative,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A carbohydrate derivative that is formally obtained from an oligosaccharide.,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000374,Acholi,,A Luo population with a population size of 2 Millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000374,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Acholi,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Luo population with a population size of 2 Millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000377,Alur,,A Luo population with a population size of 1.7 million,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000377,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Alur,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Luo population with a population size of 1.7 million,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000373,Bari,,A Nilotic Eastern population with a population size of 0.475 millon,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000373,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Bari,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Nilotic Eastern population with a population size of 0.475 millon,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000372,Wolaita,,A Eastern African population with a population size of 2 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000372,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Wolaita,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Eastern African population with a population size of 2 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000371,Nilotic Eastern,,A Eastern African population with a population size of >22 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000371,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Nilotic Eastern,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Eastern African population with a population size of >22 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000375,Kwama,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000375,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Kwama,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000376,Turkana,,"A Nilotic Eastern population with a population size of 1,016 millions",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000376,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Turkana,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A Nilotic Eastern population with a population size of 1,016 millions",,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000379,Shilluk,,A Luo population with a population size of 1.5 million,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000379,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Shilluk,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Luo population with a population size of 1.5 million,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000370,Malagasy,,A Eastern African population with a population size of 25 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000370,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Malagasy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Eastern African population with a population size of 25 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000378,Lango,,A Luo population with a population size of 2.2 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000378,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Lango,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Luo population with a population size of 2.2 millions,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0070344,ocular tuberculosis,,"A tuberculosis that is located_in some eye, has_material_basis_in Mycobacterium tuberculosis, and has_symptom inflamed eyes.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0070344,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,ocular tuberculosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A tuberculosis that is located_in some eye, has_material_basis_in Mycobacterium tuberculosis, and has_symptom inflamed eyes.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020433,"piece of turkey (skinless, raw)",,A raw skinless piece of turkey.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020433,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"piece of turkey (skinless, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw skinless piece of turkey.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002018,personal health datum,,A personal health datum is a datum that pertains to the health situation or history of an individual.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Personal health datum covers the following information

'has member' some 'analytic datum'
'has member' some 'behavioural risk factor'
'has member' some 'country of birth'
'has member' some 'dietary restrictions'
'has member' some 'Disease Attributes'
'has member' some 'health status history datum'
'has member' some 'health status trend datum'
'has member' some 'host hospital service status'
'has member' some 'subject disease stage'
'has member' some 'subject health status'
'has member' some 'subject health status (AHA)'
'has member' some 'subject health status (GSCID-BRC)'
'has member' some 'subject health status (NCIT)'
'has member' some 'subject health status (UK NHS)'
'has member' some 'subject health status at time of specimen extraction'
'has member' some 'tuberculosis disease anatomical site'
'has member' some comorbidity
'has member' some disease
'has member' some symptom",,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002018,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,personal health datum,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A personal health datum is a datum that pertains to the health situation or history of an individual.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_1110034,antigen,,A material entity that has the antigen role.,FALSE,,,,,,,,,,,,,,,,,,,,,IEDB,,,,,antigen,,,,,http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:1110034,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,antigen,,,,,,,,,,,,,,,,,,,,,,,,,,,,IEDB,,,,A material entity that has the antigen role.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_37143,organofluorine compound,,An organofluorine compound is a compound containing at least one carbon-fluorine bond.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:37143,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,organofluorine compound,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An organofluorine compound is a compound containing at least one carbon-fluorine bond.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_37175,organic hydride,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:37175,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,organic hydride,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_51151,dipolar compound,,An  organic molecule that is electrically neutral carrying a positive and a negative charge in one of its major canonical descriptions. In most dipolar compounds the charges are delocalized; however the term is also applied to species where this is not the case.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:51151,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,dipolar compound,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An  organic molecule that is electrically neutral carrying a positive and a negative charge in one of its major canonical descriptions. In most dipolar compounds the charges are delocalized; however the term is also applied to species where this is not the case.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000462,buffalo top round steak (raw),,A raw buffalo top round steak.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000462,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,buffalo top round steak (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw buffalo top round steak.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00003214,Province (Panama),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00003214,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Province (Panama),http://purl.obolibrary.org/obo/GAZ_00002892,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001858,n-dimensional coordinate,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001858,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,n-dimensional coordinate,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0425,Surinamese,Surinamer,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Surinamer,,,,HANCESTRO:0425,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Surinamese,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0424,Saint Vincentian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0424,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Saint Vincentian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0420,Peruvian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0420,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Peruvian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0423,Saint Lucian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0423,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Saint Lucian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0426,Trinidadian or Tobagonian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0426,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Trinidadian or Tobagonian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0421,Puerto Rican,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0421,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Puerto Rican,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0429,Uruguayan,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0429,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Uruguayan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0427,Turks and Caicos Islander,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0427,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Turks and Caicos Islander,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0422,Kittitian or Nevisian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0422,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Kittitian or Nevisian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0428,Virgin Islander,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0428,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Virgin Islander,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510057,low in saturated fat food,,"A claim that a food is low in saturated fat, and any claim likely to have the same meaning for the consumer, may only be made if the sum of saturated fatty acids and trans-fatty acids in the product does not exceed 1.5 g per 100 g for solids or 0.75 g/100 ml for liquids and in either case the sum of saturated fatty acids and trans-fatty acids must not provide more than 10 % of energy. [REGULATION (EC) No 1924/2006 Corrigendum 2007-01-18].

Food having one gram or less saturated fat per amount customarily consumed and 15% or less of calories from saturated fat. Meals and main dishes contain one gram or less saturated fat per 100 grams food and less than 10% of calories from saturated fat.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0057,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510057,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,low in saturated fat food,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A claim that a food is low in saturated fat, and any claim likely to have the same meaning for the consumer, may only be made if the sum of saturated fatty acids and trans-fatty acids in the product does not exceed 1.5 g per 100 g for solids or 0.75 g/100 ml for liquids and in either case the sum of saturated fatty acids and trans-fatty acids must not provide more than 10 % of energy. [REGULATION (EC) No 1924/2006 Corrigendum 2007-01-18].

Food having one gram or less saturated fat per amount customarily consumed and 15% or less of calories from saturated fat. Meals and main dishes contain one gram or less saturated fat per 100 grams food and less than 10% of calories from saturated fat.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_13800,inclusion conjunctivitis,,"A commensal bacterial infectious disease that results_in inflammation, located_in conjunctiva of the eye, has_material_basis_in Chlamydia trachomatis, which is transmitted_by sexual contact. The infection has_symptom swollen conjunctiva and eyelids and has_symptom discharge of pus and mucus.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:13800,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,inclusion conjunctivitis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A commensal bacterial infectious disease that results_in inflammation, located_in conjunctiva of the eye, has_material_basis_in Chlamydia trachomatis, which is transmitted_by sexual contact. The infection has_symptom swollen conjunctiva and eyelids and has_symptom discharge of pus and mucus.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001794,limited data set,,A 'limited data set' role between a user and given data entails that a user is authorized to see some of the fields but the remainder are withheld (or encrypted).,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001794,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,limited data set,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A 'limited data set' role between a user and given data entails that a user is authorized to see some of the fields but the remainder are withheld (or encrypted).,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_31753,leucomycin V,,"A macrolide antibiotic produced by <em>Streptomyces kitasatoensis</em>, showing activity against a wide spectrum of pathogens.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:31753,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,leucomycin V,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A macrolide antibiotic produced by <em>Streptomyces kitasatoensis</em>, showing activity against a wide spectrum of pathogens.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001764,quality control record,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001764,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,quality control record,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510207,contains {name of the nutrient or other substance} nutrition claim,,"A claim that a food contains a nutrient or another substance, for which specific conditions are not laid down in this Regulation, or any claim likely to have the same meaning for the consumer, may only be made where the product complies with all the applicable provisions of this Regulation, and in particular Article 5. For vitamins and minerals the conditions of the claim ""source of""shall apply. [REGULATION (EC) No 1924/2006 Corrigendum 2007-01-18].",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0207,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510207,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,contains {name of the nutrient or other substance} nutrition claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A claim that a food contains a nutrient or another substance, for which specific conditions are not laid down in this Regulation, or any claim likely to have the same meaning for the consumer, may only be made where the product complies with all the applicable provisions of this Regulation, and in particular Article 5. For vitamins and minerals the conditions of the claim ""source of""shall apply. [REGULATION (EC) No 1924/2006 Corrigendum 2007-01-18].",,,,,,,,
http://purl.obolibrary.org/obo/OBI_0001940,N50,,"the weighted median item size or N50 is a weighted median of the lengths of items, equal to the length of the longest item i such that the sum of the lengths of items greater than or equal in length to i is greater than or equal to half the length of all of the items. With regard to assemblies the items are typically contigs or scaffolds. It therefore denotes the ability of the software to create contigs and provides information about the resulting sequence assembly",FALSE,,,,,,,weighted median item size,,,,,,,,,,,,,,"adapted from:
""http://genome.cshlp.org/content/21/12/2224.full?sid=74019122-f944-4ccc-bffe-d16fdd0e7d6c""
(from table 7)
and from ""http://www.nature.com/nrg/journal/v14/n3/full/nrg3367.html""",,,,,N50,,"Gigascience. 2012 Dec 27;1(1):18. doi: 10.1186/2047-217X-1-18.
PMID: 23587118. 

""Here, the contig and scaffold N50 of the YH genome were ~20.9 kbp and ~22 Mbp""",,,http://purl.obolibrary.org/obo/IAO_0000125,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0001940,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,N50,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra|Alejandra Gonzalez-Beltran,,,,"the weighted median item size or N50 is a weighted median of the lengths of items, equal to the length of the longest item i such that the sum of the lengths of items greater than or equal in length to i is greater than or equal to half the length of all of the items. With regard to assemblies the items are typically contigs or scaffolds. It therefore denotes the ability of the software to create contigs and provides information about the resulting sequence assembly",,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0021669,post-infectious disorder,sequela of infectious disorder,A disorder that follows infection but is distinct from the infection itself and its usual manifestations.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C1264603|SCTID:123976001|MEDGEN:688819|ICD9:139.8|ICD10CM:B90-B94,,,,,,,,,,,,,,,,,,,,,,,,,sequela of infectious disorder,,,,MONDO:0021669,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,post-infectious disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A disorder that follows infection but is distinct from the infection itself and its usual manifestations.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000282,pork belly (raw),,A raw pork belly.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000282,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pork belly (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw pork belly.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000153,beef top sirloin petite roast,,A roast cut that is a smaller version of the larger {animal top sirloin roast,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000153,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef top sirloin petite roast,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A roast cut that is a smaller version of the larger {animal top sirloin roast,,,,,,,,
http://purl.obolibrary.org/obo/BTO_0001120,epithelial cell line,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,BTO:0001120,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/bto.owl,,,,,,,,,epithelial cell line,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HP_0001649,Tachycardia,Racing heart|Heart racing|Fast heart rate,A rapid heartrate that exceeds the range of the normal resting heartrate for age.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4020868|UMLS:C0039231|SNOMEDCT_US:86651002|SNOMEDCT_US:3424008,,,,,,,,,,,,,,,,,,,,,,,HP:0001720|HP:0001673,,Racing heart|Heart racing|Fast heart rate,,,,HP:0001649,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Tachycardia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A rapid heartrate that exceeds the range of the normal resting heartrate for age.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C111853,Sudden Unexplained Infant Death,Sudden Unexplained Infant Death|SUID,"Unexpected death of an infant less than one year of age, whose cause of death is not immediately obvious prior to investigation.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Sudden Unexplained Infant Death|SUID,,,,NCIT:C111853,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Sudden Unexplained Infant Death,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Unexpected death of an infant less than one year of age, whose cause of death is not immediately obvious prior to investigation.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C111854,Sudden Unexplained Death in Childhood,Sudden Unexplained Death in Childhood,"Unexpected death of a child over one year of age, which remains unexplained when all known and possible causes of death have been ruled out.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Sudden Unexplained Death in Childhood,,,,NCIT:C111854,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Sudden Unexplained Death in Childhood,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Unexpected death of a child over one year of age, which remains unexplained when all known and possible causes of death have been ruled out.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C111858,Direct Maternal Death,Direct Maternal Death,"Death resulting from conditions or complications which are unique to pregnancy and occur during the antepartum, intrapartum, or postpartum period.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Direct Maternal Death,,,,NCIT:C111858,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Direct Maternal Death,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Death resulting from conditions or complications which are unique to pregnancy and occur during the antepartum, intrapartum, or postpartum period.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C111859,Indirect Maternal Death,Indirect Maternal Death,"Death resulting from previously existing disease or a disease developing during pregnancy which was not associated with gestation, but which was aggravated by the unique physiologic changes of pregnancy. Examples of indirect deaths include those associated with epilepsy, diabetes, cardiac disease and hormone-dependent malignancies.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Indirect Maternal Death,,,,NCIT:C111859,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Indirect Maternal Death,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Death resulting from previously existing disease or a disease developing during pregnancy which was not associated with gestation, but which was aggravated by the unique physiologic changes of pregnancy. Examples of indirect deaths include those associated with epilepsy, diabetes, cardiac disease and hormone-dependent malignancies.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001778,draft PulseNet Canada Salmonella submission standard,,The PulseNet Canada Salmonella submission standard details the fields required in a PuseNet Canada pathogen submission report for Salmonella in spreadsheet format,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001778,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,draft PulseNet Canada Salmonella submission standard,,,,,,,,,,,,,,,,,,,,,,http://www.pulsenetinternational.org/assets/PulseNet/uploads/wgs/PND18-NCBI-Biosample-Submission.pdf,,,,,,Damion Dooley,,,,The PulseNet Canada Salmonella submission standard details the fields required in a PuseNet Canada pathogen submission report for Salmonella in spreadsheet format,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0009870,zone of stomach,section of stomach|region of stomach|gastric zone,A division of the stomach. The stomach can be divided based on mucosal histology (glandular epithelium and gastric glands) and the relative position and type of gastric gland.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Stomach#Sections|SCTID:245415005|MA:0002561|FMA:14558|EMAPA:35821,,,,,,,,,,,,,,,,,,,,,,,UBERON:0009034,,section of stomach|region of stomach|gastric zone,,,,UBERON:0009870,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,zone of stomach,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A division of the stomach. The stomach can be divided based on mucosal histology (glandular epithelium and gastric glands) and the relative position and type of gastric gland.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0009878,mesopodial skeleton,skeletal parts of mesopodium|mesopodium skeleton|mesopodial skeleton|carpal/tarsal skeleton|basipodium skeleton,"The collection of all skeletal elements in a mesopodium. Examples: the tarsal skeleton, the carpal skeleton.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,VSAO:0005022,,,,,,,,,,,,,,,,,,,,,,,,,skeletal parts of mesopodium|mesopodium skeleton|mesopodial skeleton|carpal/tarsal skeleton|basipodium skeleton,,,,UBERON:0009878,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,mesopodial skeleton,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The collection of all skeletal elements in a mesopodium. Examples: the tarsal skeleton, the carpal skeleton.",,,,,,,,
http://purl.obolibrary.org/obo/OBA_2050327,age of onset of colorectal cancer,age colorectal cancer symptoms begin|age at onset of colorectal cancer,The age at which colorectal cancer manifestations first appear.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,age colorectal cancer symptoms begin|age at onset of colorectal cancer,,,,OBA:2050327,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age of onset of colorectal cancer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The age at which colorectal cancer manifestations first appear.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001498,lineage and variant information field category,PCDS:lineage and variant information,A data field category which refers to lineage and variant information fields.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,(2026-02-28) Under review for deprecation.,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,PCDS:lineage and variant information,lineage and variant information slot category,,,,GENEPIO:0001498,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,lineage and variant information field category,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field category which refers to lineage and variant information fields.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C1225,Shiga Toxin,Shiga Toxin,A bacterial toxin produced by Shigella dysenteriae and by some strains of E. coli that inhibits protein synthesis by blocking the interaction of ribosomal RNA with peptide elongation factors.  The non-catalytic beta subunit of Shiga toxin may be useful as a fusion vector for induction of antigen-specific cytotoxic T lymphocyte responses.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Shiga Toxin,,,,NCIT:C1225,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Shiga Toxin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A bacterial toxin produced by Shigella dysenteriae and by some strains of E. coli that inhibits protein synthesis by blocking the interaction of ribosomal RNA with peptide elongation factors.  The non-catalytic beta subunit of Shiga toxin may be useful as a fusion vector for induction of antigen-specific cytotoxic T lymphocyte responses.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001667,outcome of pregnancy associated with illness,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001667,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,outcome of pregnancy associated with illness,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100291,signs and symptoms at time of specimen collection,,A personal health datum which specifies host signs and symptoms at time of specimen collection.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100291,,,,,,,,,,,,,,2022-01-31T23:53:13Z,,,,,,,,,,,,,http://purl.obolibrary.org/obo/OBI_0001619|http://purl.obolibrary.org/obo/GENEPIO_0001523,,,,,,signs and symptoms at time of specimen collection,,,,,,,,,,,,,,,,,,,,,,,,,,,,0000-0002-9578-0788,,,,A personal health datum which specifies host signs and symptoms at time of specimen collection.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001434,host reinfection information field category,PCDS:host reinfection information,A data field category which refers to host reinfection information fields.,FALSE,,,,,,,PCDS:host_reinfection_information_slot_group,,,,,,,,,,,,,,,,,,,,,,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,PCDS:host reinfection information,host reinfection information slot category,,,,GENEPIO:0001434,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,host reinfection information field category,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field category which refers to host reinfection information fields.,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0024634,large intestine disorder,large intestine disease or disorder|disorder of large intestine|disease or disorder of large intestine|disease of large intestine,A disease that involves the large intestine.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0341321|SCTID:119523007|MEDGEN:574315,,,,,,,,,,,,,,,,,,,,,,,,,large intestine disease or disorder|disorder of large intestine|disease or disorder of large intestine|disease of large intestine,,,,MONDO:0024634,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,large intestine disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A disease that involves the large intestine.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C96853,Non-Neoplastic Hepatobiliary Disorder,Non-Neoplastic Liver and Biliary System Disorder|Non-Neoplastic Liver and Biliary Disorder|Non-Neoplastic Hepatobiliary Disorder,"A non-neoplastic disorder that affects the liver, bile ducts, and gallbladder. Representative examples include hepatitis, cirrhosis, cholangitis, and cholecystitis.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Non-Neoplastic Liver and Biliary System Disorder|Non-Neoplastic Liver and Biliary Disorder|Non-Neoplastic Hepatobiliary Disorder,,,,NCIT:C96853,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Non-Neoplastic Hepatobiliary Disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A non-neoplastic disorder that affects the liver, bile ducts, and gallbladder. Representative examples include hepatitis, cirrhosis, cholangitis, and cholecystitis.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_37577,heteroatomic molecular entity,,A molecular entity consisting of two or more chemical elements.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:37577,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,heteroatomic molecular entity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A molecular entity consisting of two or more chemical elements.,,,,,,,,
http://purl.obolibrary.org/obo/APOLLO_SV_00000291,time delay of treatment detection,,The duration from the time an individual receives a treatment until the time a system designed to detect that the treatment occurred detects it in a population,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,APOLLO_SV:00000291,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/apollo_sv.owl,,,,,,,,,time delay of treatment detection,,,,,,,,,,,,,,,,,,,,,,,,,,,,William R. Hogan,,,,The duration from the time an individual receives a treatment until the time a system designed to detect that the treatment occurred detects it in a population,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0050043,Israeli tick typhus,,"A spotted fever that has_material_basis_in Rickettsia conorii subsp israelensis, which is transmitted_by ticks (Rhipicephalus sanguineus). The infection has_symptom fever, has_symptom eschar, has_symptom regional adenopathy, and has_symptom maculopapular rash on extremities.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0050043,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,Israeli tick typhus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A spotted fever that has_material_basis_in Rickettsia conorii subsp israelensis, which is transmitted_by ticks (Rhipicephalus sanguineus). The infection has_symptom fever, has_symptom eschar, has_symptom regional adenopathy, and has_symptom maculopapular rash on extremities.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_0050042,Indian tick typhus,,"A spotted fever that has_material_basis_in Rickettsia conorii subsp indica, which is transmitted_by ticks (Rhipicephalus sanguineus). The infection has_symptom fever, has_symptom eschar, has_symptom regional adenopathy, and has_symptom maculopapular rash on extremities.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0050042,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,Indian tick typhus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A spotted fever that has_material_basis_in Rickettsia conorii subsp indica, which is transmitted_by ticks (Rhipicephalus sanguineus). The infection has_symptom fever, has_symptom eschar, has_symptom regional adenopathy, and has_symptom maculopapular rash on extremities.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_0050046,Far Eastern spotted fever,,"A spotted fever that has_material_basis_in Rickettsia heilongjiangensis, which is transmitted_by ticks (Haemaphysalis concinna). The infection has_symptom fever, has_symptom eschar, has_symptom maculopapular rash, and has_symptom regional adenopathy.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0050046,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,Far Eastern spotted fever,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A spotted fever that has_material_basis_in Rickettsia heilongjiangensis, which is transmitted_by ticks (Haemaphysalis concinna). The infection has_symptom fever, has_symptom eschar, has_symptom maculopapular rash, and has_symptom regional adenopathy.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_0050041,Astrakhan spotted fever,,"A spotted fever that has_material_basis_in Rickettsia conorii subsp caspia, which is transmitted_by ticks (Rhipicephalus pumilio and Rhipicephalus sanguineus). The infection has_symptom fever, has_symptom eschar (usually single), has_symptom regional adenopathy, has_symptom maculopapular rash on extremities.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0050041,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,Astrakhan spotted fever,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A spotted fever that has_material_basis_in Rickettsia conorii subsp caspia, which is transmitted_by ticks (Rhipicephalus pumilio and Rhipicephalus sanguineus). The infection has_symptom fever, has_symptom eschar (usually single), has_symptom regional adenopathy, has_symptom maculopapular rash on extremities.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_0050047,Flinders Island spotted fever,,"A spotted fever that has_material_basis_in Rickettsia honei, which is transmitted_by cayenne ticks (Amblyomma cajennense). The infection has_symptom mild spotted fever, has_symptom eschar and has_symptom adenopathy.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0050047,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,Flinders Island spotted fever,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A spotted fever that has_material_basis_in Rickettsia honei, which is transmitted_by cayenne ticks (Amblyomma cajennense). The infection has_symptom mild spotted fever, has_symptom eschar and has_symptom adenopathy.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001400,signs and symptoms,signs and symptoms,"A data field which describes the perceived change in function or sensation (loss, disturbance or appearance) indicative of a disease, reported by a patient.",FALSE,,,,,,,PCDS:signs_and_symptoms,,,,,,,PCDS: Select all of the symptoms experienced by the host from the pick list.,,,,,,,,,,,"Generally, ""symptoms"" are subjective and reported by the patient, while ""signs"" are observed and reported by a clinician. However, data collected using case report forms are usually relayed by the patient and thus both are deamed ""reported by a patient"" in this definition.",,,PCDS: Fever,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,signs and symptoms,signs and symptoms slot,,,,GENEPIO:0001400,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,signs and symptoms,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A data field which describes the perceived change in function or sensation (loss, disturbance or appearance) indicative of a disease, reported by a patient.",,"PCDS: A perceived change in function or sensation, (loss, disturbance or appearance) indicative of a disease, reported by a patient.",,,,,,
http://purl.obolibrary.org/obo/PO_0000003,whole plant,,A plant structure (PO:0005679) which is a whole organism.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PO_GIT:69|PO_GIT:538|FNA:f8f31520-e4bc-4430-9274-8dd3cee7ffd8|FNA:ec8c2064-2a67-43d7-8e14-aecfef5cf33b|FNA:e4dde193-57f7-4ab9-9d25-96b4ca0088ba|FNA:c1ccca7d-2a98-4a9d-8603-c34b551935e0|FNA:ba1b1bd5-75bd-4195-b11c-3aba08da08c2|FNA:99508f62-7116-4e2b-90c0-19ff55ebd967|FNA:4b610104-1bb0-4c6b-9bb9-e3cc61d11ac0|http://www.langual.org/langual_thesaurus.asp?termid=B1347,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PO:0000003,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,whole plant,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A plant structure (PO:0005679) which is a whole organism.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0025792,Abnormal cognitive process,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0025792,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal cognitive process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100197,dormitory exposure process,,A process occuring within or in the vicinity of a dormitory that exposes the recipient organism to a material entity.,FALSE,,,,,,,Dormitory,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100197,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,dormitory exposure process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A process occuring within or in the vicinity of a dormitory that exposes the recipient organism to a material entity.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001661,pooled male and female,,"A phenotypic sex quality 'pooled male and female' is a categorical value used when the male and female categories or levels of a factor are combined. If used to describe a single organism, then the organism will be one or the other.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,Not a PATO phenotypic sex catigorical value.,,,,,,,NCBI BioSample: 'pooled male and female',,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001661,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,pooled male and female,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,NCBI BioSample,,"A phenotypic sex quality 'pooled male and female' is a categorical value used when the male and female categories or levels of a factor are combined. If used to describe a single organism, then the organism will be one or the other.",,,,,,,,
http://purl.obolibrary.org/obo/CLO_0007330,LLC-MK subscript(2) cell,,,FALSE,,,,,,,LLC-MK subscript(2),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CLO:0007330,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/clo.owl,,,,,,,,,LLC-MK subscript(2) cell,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510108,no artificial additives claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0108,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510108,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,no artificial additives claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_63611,moxifloxacin,,"A quinolone that consists of 4-oxo-1,4-dihydroquinoline-3-carboxylic acid bearing a cyclopropyl substituent at position 1, a fluoro substitiuent at position 6, a (4a<i>S</i>,7a<i>S</i>)-octahydro-6<em>H</em>-pyrrolo[3,4-<em>b</em>]pyridin-6-yl group at position 7 and a methoxy substituent at position 8. A member of the fluoroquinolone class of antibacterial agents.",FALSE,,,,,,,Mfx|MXF,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:7007,,,,,,CHEBI:63611,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,moxifloxacin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A quinolone that consists of 4-oxo-1,4-dihydroquinoline-3-carboxylic acid bearing a cyclopropyl substituent at position 1, a fluoro substitiuent at position 6, a (4a<i>S</i>,7a<i>S</i>)-octahydro-6<em>H</em>-pyrrolo[3,4-<em>b</em>]pyridin-6-yl group at position 7 and a methoxy substituent at position 8. A member of the fluoroquinolone class of antibacterial agents.",,,,,,,,
http://purl.obolibrary.org/obo/PATO_0000462,absent,absent from organism|absence,A quality denoting the lack of an entity.,FALSE,,,,,,,,,,,,,,"We recommend using the new absent terms (physical absence, absent anatomical entity, or absent process) instead of this class. This is a legacy term and will ultimately be obsoleted.
See https://github.com/pato-ontology/pato/issues/331.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PATO:0001996,,absent from organism|absence,,,,PATO:0000462,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/pato.owl,http://purl.oboInOwllibrary.org/oboInOwl/pato#value_slim|http://purl.oboInOwllibrary.org/oboInOwl/pato#mpath_slim|http://purl.oboInOwllibrary.org/oboInOwl/pato#absent_slim,,,,,,,,absent,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A quality denoting the lack of an entity.,,,,,,,,
http://purl.obolibrary.org/obo/PATO_0000460,abnormal,,A quality inhering in a bearer by virtue of the bearer's deviation from normal or average.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PATO:0000460,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/pato.owl,http://purl.oboInOwllibrary.org/oboInOwl/pato#value_slim|http://purl.oboInOwllibrary.org/oboInOwl/pato#mpath_slim|http://purl.oboInOwllibrary.org/oboInOwl/pato#abnormal_slim,,,,,,,,abnormal,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A quality inhering in a bearer by virtue of the bearer's deviation from normal or average.,,,,,,,,
http://purl.obolibrary.org/obo/PATO_0000467,present,,A quality inhering in a bearer by virtue of the bearer's existence.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PATO:0000467,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/pato.owl,http://purl.oboInOwllibrary.org/oboInOwl/pato#value_slim|http://purl.oboInOwllibrary.org/oboInOwl/pato#absent_slim,,,,,,,,present,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A quality inhering in a bearer by virtue of the bearer's existence.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100967,genomic target enrichment method details,genomic target enrichment method details,A data field which provides details surrounding the molecular technique used to selectively capture and amplify specific regions of interest from a genome.,FALSE,,,,,,,PCDS:genomic_target_enrichment_method_details,,,,,,,PCDS: Provide details that are applicable to the method you used.,,,,,,,,,,,Drafted 2023-12-02,,,PCDS: enrichment was done using Illumina Target Enrichment methodology with the Illumina DNA Prep with enrichment kit.,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,genomic target enrichment method details,genomic target enrichment method details slot,,,,GENEPIO:0100967,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,genomic target enrichment method details,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which provides details surrounding the molecular technique used to selectively capture and amplify specific regions of interest from a genome.,,PCDS: Details that provide additional context to the molecular technique used to selectively capture and amplify specific regions of interest from a genome.,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_2709072,Bat coronavirus RaTG13,,,FALSE,,,,,,,Bat coronavirus isolate RaTG13|Bat coronavirus Ra4991,,,,,,,,,,,,,,,,,,,Bat coronavirus RaTG13,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:2709072,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Bat coronavirus RaTG13,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000231,beef large end rib roast,,A rib roast that includes ribs 6 through 8 or 9 and is next to the chuck.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000231,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef large end rib roast,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A rib roast that includes ribs 6 through 8 or 9 and is next to the chuck.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_35757,monocarboxylic acid anion,,A carboxylic acid anion formed when the carboxy group of a monocarboxylic acid is deprotonated.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:3407|CHEBI:25382|CHEBI:13657,,,,,,CHEBI:35757,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,monocarboxylic acid anion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A carboxylic acid anion formed when the carboxy group of a monocarboxylic acid is deprotonated.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000142,contact specification - epi network contact,,An epi network contact is a person who may have recieved or transmitted an infectious disease related to an outbreak investigation.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000142,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,contact specification - epi network contact,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,An epi network contact is a person who may have recieved or transmitted an infectious disease related to an outbreak investigation.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_24397,glycophospholipid,,Any phospholipid that contain both phosphate and carbohydrate as integral structural components.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:24397,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,glycophospholipid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any phospholipid that contain both phosphate and carbohydrate as integral structural components.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0032180,Abnormal circulating metabolite concentration,,An abnormal level of an analyte measured in the blood.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0032180,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal circulating metabolite concentration,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An abnormal level of an analyte measured in the blood.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000062,AccuProbe test result,,A categorical diagnostic result of an AccuProbe test.,FALSE,,,,,,,,,,,,,,,,,,,,,NML LIMS,,,,,,,"positive, negative, not done",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000062,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,,,,,,,AccuProbe test result,,,,,Lab Analytic,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0000060,,,,,,,,,,,,,NML Labware LIMS,,A categorical diagnostic result of an AccuProbe test.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0030875,Abnormality of pulmonary circulation,Abnormality of respiratory circulation|Abnormal pulmonary circulation,A functional anomaly of that portion of the cardiosvascular system that carries deoxygenated blood from the heart to the lungs and returns oxygenated blood back to the heart.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4280730,,,,,,,,,,,,,,,,,,,,,,,,,Abnormality of respiratory circulation|Abnormal pulmonary circulation,,,,HP:0030875,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormality of pulmonary circulation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A functional anomaly of that portion of the cardiosvascular system that carries deoxygenated blood from the heart to the lungs and returns oxygenated blood back to the heart.,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000433,Kassena,,A Gurunsi population with a population size of 0.161 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000433,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Kassena,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Gurunsi population with a population size of 0.161 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000435,Dendi,,A Songhai population with a population size of 0.2 million,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000435,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Dendi,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Songhai population with a population size of 0.2 million,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000432,Mende,,The Mende are a Mande Western population with a population size of 2 million.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000432,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Mende,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The Mende are a Mande Western population with a population size of 2 million.,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000438,Tutsi,,"A Banyarwanda, Southern African population with a population size of 3 millions",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000438,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Tutsi,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A Banyarwanda, Southern African population with a population size of 3 millions",,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000437,Hutu,,A Banyarwanda population with a population size of 16 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000437,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Hutu,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Banyarwanda population with a population size of 16 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000434,Zarma,,A Songhai population with a population size of >5 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000434,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Zarma,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Songhai population with a population size of >5 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000430,Mandinka,,A Mande Western population with a population size of 13 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000430,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Mandinka,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Mande Western population with a population size of 13 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000431,Marka,,A Mande Western population with a population size of 0.4 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000431,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Marka,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Mande Western population with a population size of 0.4 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000436,Okiek,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000436,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Okiek,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ERO_0001965,experimental subject role,,"A role that inheres in a material that is input as the subject of interest in a scientific technique - either as an entity about which data is generated in an assay or study, or an entity that is transformed or modified in a material processing technique (e.g. the source from which a biological sample is taken)",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ERO:0001965,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,experimental subject role,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A role that inheres in a material that is input as the subject of interest in a scientific technique - either as an entity about which data is generated in an assay or study, or an entity that is transformed or modified in a material processing technique (e.g. the source from which a biological sample is taken)",,,,,,,,
http://purl.obolibrary.org/obo/VT_0002292,gestation period duration,gestational length|gestation length,The length of time between when a fertilized egg implants in the wall of the uterus and the birth of offspring.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,EFO:0009681|CMO:0000467|ATOL:0002292,,,,,,,,,,,,,,,,,,,,,,,,,gestational length|gestation length,,,,VT:0002292,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/vt.owl,,,,,,,,,gestation period duration,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The length of time between when a fertilized egg implants in the wall of the uterus and the birth of offspring.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00004167,diezmillo,,A cut of beef and part of the sub-prime cut known as the chuck.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00004167,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,diezmillo,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A cut of beef and part of the sub-prime cut known as the chuck.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C2959,Complication,complication|Medical Complication|Complications|Complication,"Any disease or disorder that occurs during the course of, or because of, another disease, treatment, or procedure.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,complication|Medical Complication|Complications|Complication,,,,NCIT:C2959,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Complication,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Any disease or disorder that occurs during the course of, or because of, another disease, treatment, or procedure.",,,,,,,,
http://purl.obolibrary.org/obo/OBI_0002651,image guided biopsy,,A biopsy which uses an imaging procedure to guide a needle biopsy.,FALSE,,,,,,,imaging guided biopsy|image-guided biopsy|image guided needle biopsy,,,,,,,,,,,,,,https://www.mayoclinic.org/diseases-conditions/cancer/in-depth/biopsy/art-20043922,,,,,image guided biopsy,,"Image-guided needle biopsy allows a doctor to biopsy suspicious areas that aren't readily seen or felt through skin, such as in a prostate gland.",,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/OBI_0000436,,,,,,,,,,,OBI:0002651,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,image guided biopsy,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A biopsy which uses an imaging procedure to guide a needle biopsy.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03480040,packed in vinegar and oil,,A mixture of vinegar and oil which are used as a packing medium for food material.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=K0040,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03480040,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,packed in vinegar and oil,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A mixture of vinegar and oil which are used as a packing medium for food material.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002164,subject identifier specification,,A subject identifier specification is a specification including datatype pertaining to a given standard's subject identifier field.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002164,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,subject identifier specification,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0001616,,,,Damion Dooley,,,,A subject identifier specification is a specification including datatype pertaining to a given standard's subject identifier field.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_17154,nicotinamide,,A pyridinecarboxamide that is pyridine in which the hydrogen at position 3 is replaced by a carboxamide group.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:7556|CHEBI:44258|CHEBI:25521|CHEBI:14645,,,,,,CHEBI:17154,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,nicotinamide,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A pyridinecarboxamide that is pyridine in which the hydrogen at position 3 is replaced by a carboxamide group.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0012652,colorectum,,The subdivision of the digestive tract that consists of the colon and the rectum.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C1711309|NCIT:C54189|CALOHA:TS-1298|BTO:0001613,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0012652,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,colorectum,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The subdivision of the digestive tract that consists of the colon and the rectum.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510036,very low salt or sodium claim,,"A claim that a food is very low in sodium/salt, and any claim likely to have the same meaning for the consumer, may only be made where the product contains no more than 0,04 g of sodium, or the equivalent value for salt, per 100 g or per 100 ml. This claim shall not be used for natural mineral waters and other waters [REGULATION (EC) No 1924/2006 Corrigendum 2007-01-18].

Food having 35 milligrams or less salt or sodium per amount customarily consumed (and per 50 grams if the amount customarily consumed is small). Meals and main dishes contain 35 milligrams or less salt or sodium per 100 grams of food [US FDA]",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0036,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510036,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,very low salt or sodium claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A claim that a food is very low in sodium/salt, and any claim likely to have the same meaning for the consumer, may only be made where the product contains no more than 0,04 g of sodium, or the equivalent value for salt, per 100 g or per 100 ml. This claim shall not be used for natural mineral waters and other waters [REGULATION (EC) No 1924/2006 Corrigendum 2007-01-18].

Food having 35 milligrams or less salt or sodium per amount customarily consumed (and per 50 grams if the amount customarily consumed is small). Meals and main dishes contain 35 milligrams or less salt or sodium per 100 grams of food [US FDA]",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100017,surveillance of international border crossing by ground transport strategy,,An international travel-associated surveillance strategy in which individuals are selected if they have a travel history of crossing an international border via ground transport.,FALSE,,,,,,,Surveillance of international border crossing by ground transport,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100017,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,surveillance of international border crossing by ground transport strategy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An international travel-associated surveillance strategy in which individuals are selected if they have a travel history of crossing an international border via ground transport.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02021034,buffalo roast,,A retail cut of meat from a buffalo that is of a size for slicing into more than one portion and is suitable for roasting.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02021034,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,buffalo roast,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A retail cut of meat from a buffalo that is of a size for slicing into more than one portion and is suitable for roasting.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_11736,odontoclasia,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:11736,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,odontoclasia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_23981,ethanolamines,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:23981,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,ethanolamines,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/OGMS_0000031,disease,,A disposition (i) to undergo pathological processes that (ii) exists in an organism because of one or more disorders in that organism.,FALSE,,,,,,,,,,,,,,,,,,,,,http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OGMS:0000031,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ogms.owl,,,,,,,,,disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,Albert Goldfain,,,,A disposition (i) to undergo pathological processes that (ii) exists in an organism because of one or more disorders in that organism.,,,,disease (OGMS),,,,
http://purl.obolibrary.org/obo/GENEPIO_0100910,instantaneous flow rate measurement method,instantaneous flow rate measurement method,An environmental data field which describes the process used to measure instantaneous fluid flow rate.,FALSE,,,,,,,PCDS:instantaneous_flow_rate_measurement_method,,,,,,,PCDS: Provide the name of the procedure or technology used to measure flow rate.,,,,,,,,,,,,,,PCDS: Flow meter,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,instantaneous flow rate measurement method,instantaneous flow rate measurement method slot,,,,GENEPIO:0100910,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,instantaneous flow rate measurement method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the process used to measure instantaneous fluid flow rate.,,PCDS: The process used to measure instantaneous fluid flow rate.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100219,sampling strategy specification,,A directive information entity which realizes sample strategy specifications.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100219,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,sampling strategy specification,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A directive information entity which realizes sample strategy specifications.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0101076,AMR analysis software name,AMR analysis software name,A data field which describes the name of the software used to perform an in silico antimicrobial resistance determinant identification or analysis.,FALSE,,,,,,,PCDS:amr_analysis_software_name,,,,,,,PCDS: Provide the name of the software used for AMR analysis.,,,,,,,,,,,,,,PCDS: Resistance Gene Identifier,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,AMR analysis software name,AMR analysis software name slot,,,,GENEPIO:0101076,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,AMR analysis software name,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the name of the software used to perform an in silico antimicrobial resistance determinant identification or analysis.,,PCDS: The name of the software used to perform an in silico antimicrobial resistance determinant identification/analysis.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000153,bioinformatics pipeline protocol,,A laboratory sequencing datum which describes the protocol for the bioinformatics pipeline.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000153,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,bioinformatics pipeline protocol,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A laboratory sequencing datum which describes the protocol for the bioinformatics pipeline.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001718,serotype specification,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0001687|http://purl.obolibrary.org/obo/GENEPIO_0001686,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001718,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,serotype specification,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HP_0011420,Age of death,,The age group when the cessation of life happens.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C1546180,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0011420,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Age of death,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The age group when the cessation of life happens.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C81893,Standard,technical standard|standard|Standard,"A document, established by consensus and approved by a recognized body, that provides, for common and repeated use, rules, guidelines or characteristics for activities or their results.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,technical standard|standard|Standard,,,,NCIT:C81893,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Standard,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A document, established by consensus and approved by a recognized body, that provides, for common and repeated use, rules, guidelines or characteristics for activities or their results.",,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_6447,Mollusca,,,FALSE,,,,,,,"mollusks|molluscs|clam, squid, octopus",,,,,,,,,,,,,,,,,,,Mollusca,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:6447,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Mollusca,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000271,leg of lamb center cut (raw),,A raw leg of lamb center cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000271,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,leg of lamb center cut (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw leg of lamb center cut.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00003043,sewage plant,sewage treatment plant,A waste treatment plant which equipped to treat sewage such that its potential for environmental contamination is reduced.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,sewage treatment plant,,,,ENVO:00003043,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,sewage plant,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A waste treatment plant which equipped to treat sewage such that its potential for environmental contamination is reduced.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01001370,tundra ecosystem,,"An ecosystem which 1) typically has monthly average temperatures below 10 degrees Celsius 2) has a low evapotranspiration ratio 3) is dominated by treeless terrain, covered by communities of low-growing vegetation such as dwarf shrubs, sedges and grasses, mosses, and lichens, 4) contains areas of soil underlain by permafrost with a thin active layer and 5) occurs in both polar and alpine regions (i.e., both high latitudes and high altitudes), and 5) does not have permanent snow or ice cover.",FALSE,,,,,,,,,,,,,,"Tundra ecosysems are often underlaid by permafrost, with the result that drainage is bad and the soil may be saturated for long periods. It does not have a permanent snow-ice cover.  Productivity is low in this biome because of the extremes of climate.",,,,,,,,,,,,,,,,,,SPIRE:Tundra|http://sweetontology.net/realmCryo/Tundra,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01001370,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,envoPolar,,,,,,,,tundra ecosystem,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An ecosystem which 1) typically has monthly average temperatures below 10 degrees Celsius 2) has a low evapotranspiration ratio 3) is dominated by treeless terrain, covered by communities of low-growing vegetation such as dwarf shrubs, sedges and grasses, mosses, and lichens, 4) contains areas of soil underlain by permafrost with a thin active layer and 5) occurs in both polar and alpine regions (i.e., both high latitudes and high altitudes), and 5) does not have permanent snow or ice cover.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001214,anatomical part,anatomical_part|anatomical part,A data field which describes the anatomical part of an organism.,FALSE,,,,,,,PCDS:anatomical_part,,,,,,,"PCDS: An anatomical part is a structure or location in the body. If applicable, select the standardized term and ontology ID for the anatomical material from the picklist provided. Multiple values can be provided, separated by a semi-colon.",,,,,,,,,,,,,,PCDS: Nasopharynx (NP) [UBERON:0001728],,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,anatomical_part|anatomical part,anatomical part slot,,,,GENEPIO:0001214,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,anatomical part,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the anatomical part of an organism.,,PCDS: An anatomical part of an organism.,,,,,,
http://purl.obolibrary.org/obo/HP_0000818,Abnormality of the endocrine system,,An abnormality of the endocrine system.,FALSE,,,,,,,,,,,,,,"The endocrine system is composed of glands that secrete hormones directly into the bloodstream and includes the following glands: thyroid, parathyroids, adrenals, pancreas, gonads (testicles and ovaries), and pituitary. Many other organs, such as the kidney, liver, and heart, have secondary endocrine functions.",,,,,,,,,,,,,,,,,,UMLS:C4025823|UMLS:C0014130|SNOMEDCT_US:362969004,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0000818,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormality of the endocrine system,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An abnormality of the endocrine system.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0000819,Diabetes mellitus,,A group of abnormalities characterized by hyperglycemia and glucose intolerance.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0011849|SNOMEDCT_US:73211009,,,,,,,,,,,,,,,,,,,,,,,HP:0008260|HP:0008234|HP:0008217|HP:0004908,,,,,,HP:0000819,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Diabetes mellitus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A group of abnormalities characterized by hyperglycemia and glucose intolerance.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490107,bimetal container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0107,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490107,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,bimetal container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100069,obsolete: otitis,,Inflammation of infection of the ear.,TRUE,,,,,,,Otitis,,,,,,,,,,,,,,,,true,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100069,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,otitis|obsolete: otitis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/MONDO_0021666,,,Inflammation of infection of the ear.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000136,cluster identifier,,A cluster identifier is an identifier that locates a genomic variant of an organism within a community of past or present genetically related organisms.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000136,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,cluster identifier,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A cluster identifier is an identifier that locates a genomic variant of an organism within a community of past or present genetically related organisms.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000176,beef flank (raw),,A raw beef flank.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000176,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef flank (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef flank.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03450017,boiling in small amount of liquid,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=G0017,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03450017,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,boiling in small amount of liquid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C26549,Untranslated RNA,ncRNA|Untranslated RNA|Noncoding RNA|Non-Coding RNA|Functional RNA,The product of so-called RNA genes; a functional RNA represents the final product of a gene rather than a transient molecule that will be translated into protein.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ncRNA|Untranslated RNA|Noncoding RNA|Non-Coding RNA|Functional RNA,,,,NCIT:C26549,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Untranslated RNA,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The product of so-called RNA genes; a functional RNA represents the final product of a gene rather than a transient molecule that will be translated into protein.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002070,obsolete: WRG,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,Replaced by domain appropriate term created in the Comprehensive Antibiotic Resistance Database (CARD).,,,,,,,,,,,,,,,,,,,GENEPIO:0002070,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: WRG,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ARO_3007398,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001564,genome size delta ratio QC threshold,,"This is the upper acceptable limit of the 'genome size delta ratio' with respect to a particular species.

For Salmonella a 0.10 variance in length between an assembly size and a reference genome size may be acceptable.  For E-coli a more generous 0.30 or .40 variance should be allowed, given the pathogenic subspecies’ highly dynamic genome.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001564,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,,,,,,,genome size delta ratio QC threshold,,,,,Assembly QC,,,,,,,,,,,,,,,,,,,,,,,,,,,"This is the upper acceptable limit of the 'genome size delta ratio' with respect to a particular species.

For Salmonella a 0.10 variance in length between an assembly size and a reference genome size may be acceptable.  For E-coli a more generous 0.30 or .40 variance should be allowed, given the pathogenic subspecies’ highly dynamic genome.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_46770,pyrrolidinecarboxamide,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:46770,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,pyrrolidinecarboxamide,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03500029,Polyvinylidene chloride surface,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=N0029,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03500029,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,Polyvinylidene chloride surface,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100428,sample collected by laboratory name,sample_collected_by_laboratory_name|sample collected by laboratory name,A data field which describes the specific laboratory affiliation of the sample collector.,FALSE,,,,,,,PCDS:sample_collected_by_laboratory_name,,,,,,,"PCDS: Provide the name of the specific laboratory that collected the sample (avoid abbreviations). If the information is unknown or cannot be provided, leave blank or provide a null value.",,,,,,,,,,,,,,PCDS: Topp Lab,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,sample_collected_by_laboratory_name|sample collected by laboratory name,sample collected by laboratory name slot,,,,GENEPIO:0100428,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,sample collected by laboratory name,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the specific laboratory affiliation of the sample collector.,,PCDS: The specific laboratory affiliation of the sample collector.,,,,,,
http://purl.obolibrary.org/obo/NCIT_C71898,Proprietary Name,proprietary name|Trade Name|TRADENAM|Proprietary Name(s)|Proprietary Name|Brand Name|Brand,The part of the name or logo associated with a specific product or service identifying and distinguishing it from varieties of the same product or service marketed by competing companies.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,proprietary name|Trade Name|TRADENAM|Proprietary Name(s)|Proprietary Name|Brand Name|Brand,,,,NCIT:C71898,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Proprietary Name,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The part of the name or logo associated with a specific product or service identifying and distinguishing it from varieties of the same product or service marketed by competing companies.,,,,brand name,,,,
http://purl.obolibrary.org/obo/FOODON_02000367,veal shoulder (raw),,A raw veal shoulder.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000367,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,veal shoulder (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw veal shoulder.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C25155,Birth,Delivery|Born|Birth,The event of being born.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Delivery|Born|Birth,,,,NCIT:C25155,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Birth,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The event of being born.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001162,epidemiology investigation data item,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001162,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,epidemiology investigation data item,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_33090,Viridiplantae,,,FALSE,,,,,,,green plants|chlorophyte/embryophyte group|Chlorophyta/Embryophyta group,,,,,,,,,,,,,,,,,,,Viridiplantae,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:33090,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Viridiplantae,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0002516,digestive system cancer,GI tumour|GI tumor,A primary or metastatic malignant neoplasm involving any part of the digestive system.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0751075|NCIT:C4890|MEDGEN:148231|ICD9:239.0|ICD10CM:C15-C26|DOID:3119,,,,,,,,,,,,,,,,,,,,,,,,GI tumour|GI tumor,malignant neoplasm of digestive system|malignant gastrointestinal system neoplasm|malignant gastrointestinal neoplasm|malignant digestive system neoplasm|gastrointestinal system cancer|digestive system cancer|cancer of digestive system,,,,MONDO:0002516,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,digestive system cancer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A primary or metastatic malignant neoplasm involving any part of the digestive system.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00016203,"populated place, Palestinian Territories",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00016203,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Palestinian Territories",http://purl.obolibrary.org/obo/GAZ_00002475,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100414,border testing test day type field category,border testing test day type|PCDS:Environmental conditions and measurements,A data field which describes the day a traveller was tested on or after arrival at their point of entry.,FALSE,,,,,,,PCDS:border_testing_test_day_type_slot_group,,,,,,,PCDS: Select the test day.,,,,,,,,,,,,,,PCDS: day 1,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,border testing test day type|PCDS:Environmental conditions and measurements,border testing test day type slot,,,,GENEPIO:0100414,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-21T01:45:57.696Z,,,,,,,,,,,,,,,,,,,border testing test day type field category,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the day a traveller was tested on or after arrival at their point of entry.,,PCDS: The day a traveller was tested on or after arrival at their point of entry.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001247,animal specimen,,A specimen extracted from an animal,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001247,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,animal specimen,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A specimen extracted from an animal,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000815,liquid environmental material,,An environmental material which is in a liquid state.,FALSE,,,,,,,,,,,,,,"This is a defined class: most of its subclasses will not be asserted, but filled by inference.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01000815,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,envoPolar,,,,,,,,liquid environmental material,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental material which is in a liquid state.,,,,,,,,
http://purl.obolibrary.org/obo/MP_0000316,cellular necrosis,necrotic cells|necrotic cell,"pathologic death of cells, usually from irreversible damage",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,necrotic cells|necrotic cell,,,,MP:0000316,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mp.owl,,,,,,,,,cellular necrosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"pathologic death of cells, usually from irreversible damage",,,,,,,,
http://purl.obolibrary.org/obo/MP_0000313,abnormal cell death,abnormal cellular death|abnormal cell viability,any anomaly in the cessation of function at the cellular level,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MP:0001647,,abnormal cellular death|abnormal cell viability,,,,MP:0000313,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mp.owl,,,,,,,,,abnormal cell death,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,any anomaly in the cessation of function at the cellular level,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530268,food plant physical quality,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0268,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530268,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food plant physical quality,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_2529,splenic disease,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:2529,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,splenic disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0001729,oropharynx,oral part of pharynx,The portion of the pharynx that lies between the soft palate and the upper edge of the epiglottis.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,XAO:0004048|Wikipedia:Oropharynx|VSAO:0000034|VHOG:0000457|UMLS:C0521367|SCTID:263376008|NCIT:C12762|MESH:D009960|MAT:0000446|MA:0000351|GAID:340|FMA:54879|EV:0100067|EMAPA:25094|EHDAA2:0004082|EFO:0001976|CALOHA:TS-0718|BTO:0005257,,,,,,,,,,,,,,,,,,,,,,,,,oral part of pharynx,,,,UBERON:0001729,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,oropharynx,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The portion of the pharynx that lies between the soft palate and the upper edge of the epiglottis.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0001728,nasopharynx,rhinopharynx|nasal part of pharynx,The section of the pharynx that lies above the soft palate.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Nasopharynx|VHOG:0000375|UMLS:C0027442|SCTID:181200003|NCIT:C12423|MESH:D009305|MAT:0000447|MA:0000443|GAID:339|FMA:54878|EV:0100066|EMAPA:17670|EHDAA:7086|EHDAA2:0001239|CALOHA:TS-0663|BTO:0000662,,,,,,,,,,,,,,,,,,,,,,,,,rhinopharynx|nasal part of pharynx,,,,UBERON:0001728,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,nasopharynx,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The section of the pharynx that lies above the soft palate.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102140,infectious disease stage,infectious disease stage 3|infectious disease stage 2|infectious disease stage 1,"PCDS: Infectious diseases progress through distinct stages, typically encompassing incubation, prodromal, illness, decline, and convalescence. These stages describe the progression from initial exposure to pathogen to recovery or resolution. Select the infectious disease stage from the pick list provided.",FALSE,,,,,,,PCDS:infectious_disease_stage_*,,,,,,,"PCDS: Infectious diseases progress through distinct stages, typically encompassing incubation, prodromal, illness, decline, and convalescence. These stages describe the progression from initial exposure to pathogen to recovery or resolution. Select the infectious disease stage from the pick list provided.",,,,,,,,,,,,,,PCDS: Acute disease stage,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,infectious disease stage 3|infectious disease stage 2|infectious disease stage 1,,,,GENEPIO:0102140,,,,,,,,,,,,,,2026-04-13T17:16:47.336Z,,,,,,,,,,,,,,,,,,,infectious disease stage,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PCDS: The stage of the infectious disease at the time of sampling.,,,,,,
http://purl.obolibrary.org/obo/ENVO_06105112,synthetic plastic,manufactured plastic,A plastic which is composed primarily of polymers produced by a manufacturing process.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://eurovoc.europa.eu/1837|http://aims.fao.org/aos/agrovoc/c_5998,,,,,,,,,,,,,,,,,,,,,,,,,manufactured plastic,,,,ENVO:06105112,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,envoPolar|envoPlastics,,,,,,,,synthetic plastic,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A plastic which is composed primarily of polymers produced by a manufacturing process.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00001066,Province (Sierra Leone),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00001066,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Province (Sierra Leone),http://purl.obolibrary.org/obo/GAZ_00000914,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_28659,phosphorus atom,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:8168|CHEBI:26080,,,,,,CHEBI:28659,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,phosphorus atom,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002081,draft sequence repository data - specimen collection,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002081,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,draft sequence repository data - specimen collection,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"order:
GENEPIO:0001237 # specimen type (host or environmental context)
OBI:0001619 # specimen collection date
OBI:0000659 # specimen collection process
GENEPIO:0002094 # specimen collection device
GENEPIO:00001600 # draft sequence repository data - geographic location
ENVO:00010483 # environmental material
ENVO:00002297 # environmental feature
GENEPIO:0001567 # subject (host) taxonomic species
GENEPIO:0000110 # subject health status
GENEPIO:0001617 # subject disease
GENEPIO:0000028 # subject body product
GENEPIO:0000025 # specimen source anatomical site
FOODON:03411564 # draft sequence repository data - food processing",,,,,
http://purl.obolibrary.org/obo/FOODON_03309065,fish fillet (breaded),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://bioregistry.io/reference/siren:F9065,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03309065,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,fish fillet (breaded),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0005922,inferior nasal concha,inferior turbinate|inferior nasal turbinate bone|inferior nasal turbinate,A turbinal located on the maxilla bone.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Inferior_nasal_concha|UMLS:C0225434|SCTID:362882006|SCTID:361932000|NCIT:C32794|FMA:54736,,,,,,,,,,,,,,,,,,,,,,,,,inferior turbinate|inferior nasal turbinate bone|inferior nasal turbinate,,,,UBERON:0005922,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,inferior nasal concha,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A turbinal located on the maxilla bone.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0005921,middle nasal concha,middle turbinate|middle nasal turbinate,"The medial surface of the labyrinth of ethmoid consists of a thin lamella, which descends from the under surface of the cribriform plate, and ends below in a free, convoluted margin, the middle nasal concha. It is rough, and marked above by numerous grooves, directed nearly vertically downward from the cribriform plate; they lodge branches of the olfactory nerves, which are distributed to the mucous membrane covering the superior nasal concha.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Middle_nasal_concha|SCTID:361933005|FMA:57459,,,,,,,,,,,,,,,,,,,,,,,,,middle turbinate|middle nasal turbinate,,,,UBERON:0005921,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,middle nasal concha,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The medial surface of the labyrinth of ethmoid consists of a thin lamella, which descends from the under surface of the cribriform plate, and ends below in a free, convoluted margin, the middle nasal concha. It is rough, and marked above by numerous grooves, directed nearly vertically downward from the cribriform plate; they lodge branches of the olfactory nerves, which are distributed to the mucous membrane covering the superior nasal concha.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0005928,external naris,blowhole,A naris that provides one of the small external openings of the head that give passage to air for breathing.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ZFA:0000550|XAO:0003033|Wikipedia:Nostril|VHOG:0000544|UMLS:C0595944|TAO:0000550|SCTID:276165005|NCIT:C33178|MA:0001320|FMA:59645|EMAPA:17848|EHDAA:9085|EHDAA2:0001275|AAO:0010358|AAO:0000983|AAO:0000024,,,,,,,,,,,,,,,,,,,,,,,,naris,nostril|external nares,blowhole,,,UBERON:0005928,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,external naris,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A naris that provides one of the small external openings of the head that give passage to air for breathing.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001897,phone type - home,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001897,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,phone type - home,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,home,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100900,intestinal content,,"Undigested food material, microbiota, and other materials found in the intestine.",FALSE,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Gastrointestinal_tract#Lower_gastrointestinal_tract,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100900,,,,,,,,,,,,,https://orcid.org/0000-0001-5275-8866,2023-11-28T13:54:45Z,,,,,,,,,,,,,,,,,,,intestinal content,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Undigested food material, microbiota, and other materials found in the intestine.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_85701,macro broth dilution method,,A method to determine the minimum inhibitory concentration (MIC) of antibiotics in which growth media is pipetted into a multi-well plate. Each well contains a known concentration of drug which is inoculated with a known quantity of bacteria. The plate is incubated for a specified period of time and each well is assessed for bacterial cell growth. The drug concentration in the first well showing no growth is known as the MIC for that antibiotic. Minimum 2 mL total broth dilution volume.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCIT:85701,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/aro.owl,,,,,,,,,macro broth dilution method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A method to determine the minimum inhibitory concentration (MIC) of antibiotics in which growth media is pipetted into a multi-well plate. Each well contains a known concentration of drug which is inoculated with a known quantity of bacteria. The plate is incubated for a specified period of time and each well is assessed for bacterial cell growth. The drug concentration in the first well showing no growth is known as the MIC for that antibiotic. Minimum 2 mL total broth dilution volume.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C64989,Diagnostic Aspiration,Diagnostic Aspiration,The withdrawal of fluid via a needle for microscopic examination for the purpose of diagnosing a disease/disorder.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Diagnostic Aspiration,,,,NCIT:C64989,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Diagnostic Aspiration,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The withdrawal of fluid via a needle for microscopic examination for the purpose of diagnosing a disease/disorder.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000222,beef rib sub-primal (raw),,A raw beef rib sub-primal cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000222,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef rib sub-primal (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef rib sub-primal cut.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002137,breadth of coverage,,A data item which is the amount of a reference sequence covered by a sequence of interest.|A data item which is the amount of a reference sequence covered by a sequence of interest.,FALSE,,,,,,,,,,,,,,,,,,,,,Emma Griffiths,,,,,breadth of coverage,,"Eighty percent of the reference genome was covered by sequence fragments with a coverage depth of 4X; therefore, the breadth of coverage was 80% (4:5).|Eighty percent of the reference genome was covered by sequence fragments with a coverage depth of 4X; therefore, the breadth of coverage was 80% (4:5).",,,ready for release|http://purl.obolibrary.org/obo/IAO_0000428,OBI:0002879|http://purl.obolibrary.org/obo/OBI_0002879,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002137,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-1107-9135,,,,,,,,,,,,,,,,,,,,breadth of coverage|breadth of coverage,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135,,,https://github.com/obi-ontology/obi/issues/1579,A data item which is the amount of a reference sequence covered by a sequence of interest.|A data item which is the amount of a reference sequence covered by a sequence of interest.,,,help:Breadth of coverage should be reported as a percentage value (e.g. 95%) to a fold of coverage (e.g. 10X).,,,,,
http://purl.obolibrary.org/obo/CHEBI_55504,carbacephem,,"Any member of a group of synthetic antibiotics, similar to cephems but with carbon substituted for the sulfur; all possessing an acylated amine functionality at C-6 and (<i>S</i>,<i>R</i>) stereochemistry at C-6 and C-7.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:55504,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,carbacephem,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Any member of a group of synthetic antibiotics, similar to cephems but with carbon substituted for the sulfur; all possessing an acylated amine functionality at C-6 and (<i>S</i>,<i>R</i>) stereochemistry at C-6 and C-7.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001567,subject organism (host) taxonomic species,,"The species of the host organism from which a specimen (pathogen) organism was obtained. Use the full taxonomic name, eg, ""Homo sapiens"".",FALSE,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0001835,,,,,,,Homo sapiens,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001567,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,subject organism (host) taxonomic species,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"The species of the host organism from which a specimen (pathogen) organism was obtained. Use the full taxonomic name, eg, ""Homo sapiens"".",,,lookup,,,,,
http://purl.obolibrary.org/obo/IDO_0000567,secondary infection,,An infection bearing the secondary infection role.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,IDO:0000567,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ido.owl,,,,,,,,,secondary infection,,,,,,,,,,,,,,,,,,,,,,,,,,,,Lindsay Cowell|Alexander Diehl|Albert Goldfain,,,,An infection bearing the secondary infection role.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03601059,tuna saku,,A saku which is derived from tuna fish.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03601059,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,tuna saku,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A saku which is derived from tuna fish.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_83403,monochlorobenzenes,,Any member of the class of chlorobenzenes containing a mono- or poly-substituted benzene ring in which only one substituent is chlorine.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:83403,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,monochlorobenzenes,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any member of the class of chlorobenzenes containing a mono- or poly-substituted benzene ring in which only one substituent is chlorine.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002050,obsolete: Microscan,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002050,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: Microscan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ARO_3004400,,,,,,,,,,,
http://purl.obolibrary.org/obo/HP_0010750,Dermatochalasis,Redundant eyelid skin|Eyelid dermatochalasia|Extra eyelid skin|Droopy eyelid skin|Baggy eyes,Loss of elasticity of the upper and lower eyelids causing the skin to sag and bulge.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C2674149|UMLS:C0423124|SNOMEDCT_US:246815009,,,,,,,,,,,,,,,,,,,,,,,,,Redundant eyelid skin|Eyelid dermatochalasia|Extra eyelid skin|Droopy eyelid skin|Baggy eyes,,,,HP:0010750,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Dermatochalasis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Loss of elasticity of the upper and lower eyelids causing the skin to sag and bulge.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001773,contig LG50,,"An assembly quality control datum which is defined as number of contigs equal to or longer than the contig N50, when the genome size is factored into the calculation.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001773,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,contig LG50,,,,,Assembly QC,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"An assembly quality control datum which is defined as number of contigs equal to or longer than the contig N50, when the genome size is factored into the calculation.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001286,health authority,,This list would be customized to include organizations local to an application's software installation.  It is an example of a set of ontology terms that would best be organized by a central authority if  federated installations need to share investigator contact info for example.,FALSE,,,,,,,,,,,,,,This list would be customized to include organizations local to an application's software installation.  It is an example of a set of ontology terms that would best be organized by a central authority if  federated installations need to share investigator contact info for example.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001286,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,health authority,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02021431,butchery cut of elk,,A piece of elk meat which has been cut according to butchery practice.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02021431,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,butchery cut of elk,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A piece of elk meat which has been cut according to butchery practice.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001112,variation project,,A sequencing project with a primary goal of identifying large or small sequence variation across populations.,FALSE,,,,,,,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/books/NBK54364/,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001112,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,variation project,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A sequencing project with a primary goal of identifying large or small sequence variation across populations.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001001,test threshold measurement comparator,,"The measurement comparator is a sign indicating that a measurement is above, equal to, or below a given threshold.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,"In expressions like: ""<= 8mg/L""",,,http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001001,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,test threshold measurement comparator,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"The measurement comparator is a sign indicating that a measurement is above, equal to, or below a given threshold.",,,,,,,,
http://purl.obolibrary.org/obo/ENVO_02000047,animal feed,,"Food material which can be used to meet nutritional requirements of animals, particularly livestock such as cattle, goats, sheep, horses, chickens and pigs.",FALSE,,,,,,,,,,,,,,"Most animal feed is from plants but some is of animal origin. Fodder refers particularly to food given to the animals (including plants cut and carried to them), rather than that which they forage for themselves. It includes hay, straw, silage, compressed and pelleted feeds, oils and mixed rations, and also sprouted grains and legumes.",,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Animal_feed,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:02000047,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,animal feed,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Food material which can be used to meet nutritional requirements of animals, particularly livestock such as cattle, goats, sheep, horses, chickens and pigs.",,,,,,,,
http://purl.obolibrary.org/obo/OMIT_0019022,Bronchoalveolar Lavage,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OMIT:0019022,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/omit.owl,,,,,,,,,Bronchoalveolar Lavage,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510274,Southwest Plains food claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0274,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510274,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,Southwest Plains food claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_140326,tertiary carboxamide,,A carboxamide resulting from the formal condensation of a carboxylic acid with a secondary amine; formula RC(=O)NHR<small><sup>1</small></sup>R<small><sup>2</small></sup>.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:140326,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,tertiary carboxamide,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A carboxamide resulting from the formal condensation of a carboxylic acid with a secondary amine; formula RC(=O)NHR<small><sup>1</small></sup>R<small><sup>2</small></sup>.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_140325,secondary carboxamide,,A carboxamide resulting from the formal condensation of a carboxylic acid with a primary amine; formula RC(=O)NHR<small><sup>1</small></sup>.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:140325,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,secondary carboxamide,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A carboxamide resulting from the formal condensation of a carboxylic acid with a primary amine; formula RC(=O)NHR<small><sup>1</small></sup>.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0000112,specimen role,,A role borne by a material entity that is obtained during a specimen collection process and that can be realized by performing measurements or observations on the specimen.,FALSE,,,,,,,,,,,,,,,,,,,,,OBI,,,,"parasite example
- when parasite in people we study people, people are subjects and parasites are specimen
- when parasite extracted, they become subject in the following study
specimen can later be subject.|blood taken from animal: animal continues in study, whereas blood has role specimen.
something taken from study subject, leaves the study and becomes the specimen.|Note: definition is in specimen creation objective which is defined as an objective to obtain and store a material entity for potential use as an input during an investigation.|22Jun09.  The definition includes whole organisms, and can include a human.  The link between specimen role and study subject role has been removed.  A specimen taken as part of a case study is not considered to be a population representative, while a specimen taken as representing a population, e.g. person taken from a cohort, blood specimen taken from an animal) would be considered a population representative and would also bear material sample role.",specimen role,,liver section; a portion of a culture of cells; a nemotode or other animal once no longer a subject (generally killed); portion of blood from a patient.,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0000112,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,specimen role,,,,,,,,,,,,,,,,,,,,,,,,,,,,GROUP:  Role Branch,,,https://github.com/obi-ontology/obi/issues/1013,A role borne by a material entity that is obtained during a specimen collection process and that can be realized by performing measurements or observations on the specimen.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102285,GeneMind GenoCare 1600,,A DNA sequencer manufactured by GeneMInd which uses amplication free library preparation and sequencing-by-synthesis to achieve high accuracy sequences.,FALSE,,,,,,,GenoCare 1600,,,,,,,,,,,,,,https://pubmed.ncbi.nlm.nih.gov/38862429/,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102285,,,,,,,,,,,,,https://orcid.org/0000-0002-7654-6902|https://orcid.org/0000-0001-8008-8249,2026-03-30T14:26:04.627Z,,,,,,,,,,,,,,,,,,,GeneMind GenoCare 1600,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A DNA sequencer manufactured by GeneMInd which uses amplication free library preparation and sequencing-by-synthesis to achieve high accuracy sequences.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02021659,piece of pig (raw),,A raw piece of pork.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02021659,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of pig (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw piece of pork.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_35992,penams,,"Natural and synthetic antibiotics containing the 4-thia-1-azabicyclo[3.2.0]heptan-7-one structure, generally assumed to have the 5<i>R</i> configuration unless otherwise specified.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:35992,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,penams,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Natural and synthetic antibiotics containing the 4-thia-1-azabicyclo[3.2.0]heptan-7-one structure, generally assumed to have the 5<i>R</i> configuration unless otherwise specified.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100772,nucleic acid extraction kit,nucleic acid extraction kit|extraction kit,A data field which describes the kit used to extract genomic material from a sample,FALSE,,,,,,,PCDS:nucleic_acid_extraction_kit,,,,,,,PCDS: Provide the name of the genomic extraction kit used.,,,,,,,,,,,Drafted 2023-07-27,,,PCDS: QIAamp PowerFecal Pro DNA Kit,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,nucleic acid extraction kit|extraction kit,nucleic acid extraction kit slot,,,,GENEPIO:0100772,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-21T01:14:47.111Z,,,,,,,,,,,,,,,,,,,nucleic acid extraction kit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the kit used to extract genomic material from a sample,,PCDS: The kit used to extract genomic material from a sample,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000222,oceanic island,,"An island that does not sit on a continental shelf, and is of volcanic origin.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Oceanic_island|EcoLexicon:oceanic_island,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00000222,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,oceanic island,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An island that does not sit on a continental shelf, and is of volcanic origin.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C113609,Chronic Liver Disease,Chronic liver disease|Chronic Liver Disease,"Hepatic necrosis, inflammation, or scarring due to any cause that persists for more than 6 months. Manifestations may include signs and symptoms of cholestasis, portal hypertension, and/or abnormal liver function tests.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Chronic liver disease|Chronic Liver Disease,,,,NCIT:C113609,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Chronic Liver Disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Hepatic necrosis, inflammation, or scarring due to any cause that persists for more than 6 months. Manifestations may include signs and symptoms of cholestasis, portal hypertension, and/or abnormal liver function tests.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000092,"beef chuck short rib (boneless, raw)",,A raw and boneless beef chuck short rib.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000092,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"beef chuck short rib (boneless, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw and boneless beef chuck short rib.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510042,cholesterol free claim,,"Food having less than 2 milligrams cholesterol per amount customarily consumed (or for meals and main dishes, less than 2 milligrams cholesterol per labeled serving). Such food must contain no ingredient that contains cholesterol except where the ingredient listed has been footnoted '*adds a trivial amount of cholesterol'. If the food contains less than 2 milligrams cholesterol per amount customarily consumed by special processing and the total fat exceeds 13 grams cholesterol per amount or labeled serving, the amount of cholesterol must be 'Substantially less' (25%) than in a comparable food with significant market share (5% of market).",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0042,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510042,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,cholesterol free claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Food having less than 2 milligrams cholesterol per amount customarily consumed (or for meals and main dishes, less than 2 milligrams cholesterol per labeled serving). Such food must contain no ingredient that contains cholesterol except where the ingredient listed has been footnoted '*adds a trivial amount of cholesterol'. If the food contains less than 2 milligrams cholesterol per amount customarily consumed by special processing and the total fat exceeds 13 grams cholesterol per amount or labeled serving, the amount of cholesterol must be 'Substantially less' (25%) than in a comparable food with significant market share (5% of market).",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002047,antimicrobial resistance testing method device or reagent,,"The commercial kit or product used to determine the MIC e.g. E-Test. If a commercial product was not used, include the type of media used.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002047,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,antimicrobial resistance testing method device or reagent,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"The commercial kit or product used to determine the MIC e.g. E-Test. If a commercial product was not used, include the type of media used.",,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0100131,pediatric acute respiratory distress syndrome,PARDS,"Acute respiratory distress syndromet that occurs in pediatric patients and includes findings of new infiltrates (unilateral or bilateral) consistent with acute parenchymal disease, edema not fully explained by fluid overload or cardiac failure, and may present as new acute lung disease in setting of chronic lung disease and/or heart disease, and perinatal lung disease is excluded.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C6012346|Orphanet:685082|MEDGEN:1876564|GARD:0027370,,,,,,,,,,,,,,,,,,,,,,,,,PARDS,,,,MONDO:0100131,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#rare|http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar|http://purl.oboInOwllibrary.org/oboInOwl/mondo#orphanet_rare|http://purl.oboInOwllibrary.org/oboInOwl/mondo#ordo_disorder|http://purl.oboInOwllibrary.org/oboInOwl/mondo#gard_rare,,,,,,,,pediatric acute respiratory distress syndrome,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Acute respiratory distress syndromet that occurs in pediatric patients and includes findings of new infiltrates (unilateral or bilateral) consistent with acute parenchymal disease, edema not fully explained by fluid overload or cardiac failure, and may present as new acute lung disease in setting of chronic lung disease and/or heart disease, and perinatal lung disease is excluded.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490237,plastic screw cap or lid,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0237,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490237,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,plastic screw cap or lid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0002633,PacBio Sequel II,,"A DNA sequencer built upon single molecule real-time sequencing technology, optimized for generation of highly accurate (""HiFi"") long reads, and which is manufactured by the Pacific Biosciences corporation.",FALSE,,,,,,,Pacific BioSciences Sequel II,,,,,,,,,,,,,,http://www.pacb.com/products-and-services/pacbio-systems/sequel/,,,,,PacBio Sequel II,,The cDNAs were sequenced on the PacBio Sequel II platform.,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0002633,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PacBio Sequel II,,,,,,,,,,,,,,,,,,,,,,,,,,,,Dan Berrios|Bonita Lam,,,,"A DNA sequencer built upon single molecule real-time sequencing technology, optimized for generation of highly accurate (""HiFi"") long reads, and which is manufactured by the Pacific Biosciences corporation.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002076,specimen collection site - geographic feature,,"A landform, biome or built environment at site that a given specimen was collected from.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002076,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,specimen collection site - geographic feature,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"A landform, biome or built environment at site that a given specimen was collected from.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100002,diagnostic testing sampling,,A sampling strategy in which individuals are sampled in the context of diagnostic testing.,FALSE,,,,,,,Diagnostic testing,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100002,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,diagnostic testing sampling,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A sampling strategy in which individuals are sampled in the context of diagnostic testing.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0001988,feces,spraint|scat|portion of scat|portion of guano|portion of dung|guano|frass|fewmet|dung|cow pat|cow dung,"Portion of semisolid bodily waste discharged through the anus[MW,modified].",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:Feces|Wikipedia:Feces|UMLS:C0015733|NCIT:C13234|MIAA:0000053|MESH:D005243|MAT:0000053|MA:0002509|GAID:1199|FMA:64183|ENVO:00002003|CALOHA:TS-2345|BTO:0000440,,,,,,,,,,,,,,,,,,,,,,,,excreta,stool|portionem cacas|portion of feces|portion of fecal matter|portion of fecal material|portion of faeces|portion of excrement|piece of shit|fecal matter|fecal material|faeces,spraint|scat|portion of scat|portion of guano|portion of dung|guano|frass|fewmet|dung|cow pat|cow dung,,,UBERON:0001988,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,feces,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Portion of semisolid bodily waste discharged through the anus[MW,modified].",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_38166,organic heteropolycyclic compound,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:38075|CHEBI:25429,,,,,,CHEBI:38166,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,organic heteropolycyclic compound,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://www.ebi.ac.uk/efo/EFO_0005603,age at breast cancer diagnosis,,The age at which a breast cancer diagnosis was made in a human patient,FALSE,,,,,,,,,,,,,,The age at which a breast cancer diagnosis was made in a human patient,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,efo:EFO_0005603,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age at breast cancer diagnosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,Helen Parkinson,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000442,bison top sirloin butt (raw),,A raw bison top sirloin butt.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000442,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,bison top sirloin butt (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw bison top sirloin butt.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000247,rangeland biome,,A rangeland biome is an anthropogenic terrestrial biome which is primarily used for the rearing and grazing of livestock.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01000247,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,rangeland biome,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A rangeland biome is an anthropogenic terrestrial biome which is primarily used for the rearing and grazing of livestock.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490331,lacquered paper container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0331,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490331,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lacquered paper container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000004,administrative region,administrative area,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Administrative_region|TGN:81123|TGN:81099|TGN:80001|SWEETRealm:AdministrativeRegion|FTT:37|FTT:29|FTT:28|FTT:27|FTT:26|FTT:25|FTT:24|FTT:23|FTT:22|FTT:21|FTT:19|FTT:18|FTT:16|FTT:15|FTT:1252|FTT:1242,,,,,,,,,,,,,,,,,,,,,,,,,administrative area,,,,ENVO:00000004,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,administrative region,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_32583,calcium sulfate dihydrate,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:32583,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,calcium sulfate dihydrate,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000936,dedicated campground,,"A campground which has been modified by humans to provide and maintain facilities for camping such as fire pits, road access, latrines, and garbage bins.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01000936,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,dedicated campground,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A campground which has been modified by humans to provide and maintain facilities for camping such as fire pits, road access, latrines, and garbage bins.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100481,prevalence metrics details,prevalence_metrics_details|prevalence metrics details,A data field which describes the details pertaining to the prevalence metrics from a surveillance project.,FALSE,,,,,,,PCDS:prevalence_metrics_details,,,,,,,"PCDS: If there are details pertaining to samples or organism counts in the sample plan that might be informative, provide details using free text.",,,,,,,,,,,,,,PCDS: Hazard organism counts (i.e. Salmonella) do not distinguish between serovars.,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,prevalence_metrics_details|prevalence metrics details,prevalence metrics details slot,,,,GENEPIO:0100481,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-12-22T00:55:53.808Z,,,,,,,,,,,,,,,,,,,prevalence metrics details,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the details pertaining to the prevalence metrics from a surveillance project.,,PCDS: The details pertaining to the prevalence metrics from a surveillance project.,,,,,,
http://purl.obolibrary.org/obo/CHEBI_71961,lividomycin A,,A member of the class of lividomycins that is lividomycin B in which position 4 of the diamino-<small>L</small>-idopyranosyl moiety has been converted into its α-<small>D</small>-mannopyranoside.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:71961,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,lividomycin A,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A member of the class of lividomycins that is lividomycin B in which position 4 of the diamino-<small>L</small>-idopyranosyl moiety has been converted into its α-<small>D</small>-mannopyranoside.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100879,alkalinity measurement unit,alkalinity measurement unit,An environmental data field which describes the units of a measurement of alkalinity.,FALSE,,,,,,,PCDS:alkalinity_measurement_unit,,,,,,,PCDS: Provide the units of the measured alkalinity.,,,,,,,,,,,,,,PCDS: milligram per liter of calcium carbonate (mg/L CaCO3),,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,alkalinity measurement unit,alkalinity measurement unit slot,,,,GENEPIO:0100879,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,alkalinity measurement unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the units of a measurement of alkalinity.,,PCDS: The units of a measurement of alkalinity.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100980,AB 3730 Genetic Analyzer,,An Applied Biosystems sequencing instrument model which utilises an 48 capillary array electrophoresis system for sequencing.,FALSE,,,,,,,AB 3730 sequencer,,,,,,,The 3730 series is the successor to the 3500 series. | Windows 10 and cloud enabled,,,,,,,https://tools.thermofisher.com/content/sfs/brochures/cms_042636.pdf,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100980,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2023-11-28T18:23:15.862Z,,,,,,,,,,,,,,,,,,,AB 3730 Genetic Analyzer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An Applied Biosystems sequencing instrument model which utilises an 48 capillary array electrophoresis system for sequencing.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000332,pork sirloin tip,,The sirloin tip also known as the Knuckle is the muscle group of a pig that runs parallel with the (Femur) Leg bone that extends upward from the (Patella) Kneecap to the Ball of the Femur.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000332,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pork sirloin tip,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The sirloin tip also known as the Knuckle is the muscle group of a pig that runs parallel with the (Femur) Leg bone that extends upward from the (Patella) Kneecap to the Ball of the Femur.,,,,,,,,
http://purl.obolibrary.org/obo/ARO_3004405,Becton Dickinson,,"Specific vendor of automated system of analysis for determining antimicrobial susceptibility headquartered in New Jersey, USA. Becton Dickinson is the developer of the Phoenix automated testing platform.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ARO:3004405,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/aro.owl,,,,,,,,,Becton Dickinson,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Specific vendor of automated system of analysis for determining antimicrobial susceptibility headquartered in New Jersey, USA. Becton Dickinson is the developer of the Phoenix automated testing platform.",,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000675,density,,"A ratio in which the numerator represents any quantity and the denominator represents an interval of space (distance, area, or volume).",FALSE,,,,,,,,,,,,,,,,,,,,,SEVCO group,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000675,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,density,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Brian S. Alper, Joanne Dehnbostel, Muhammad Afzal, Kenneth Wilkins, Harold Lehmann|",,,,"A ratio in which the numerator represents any quantity and the denominator represents an interval of space (distance, area, or volume).",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_63299,carbohydrate derivative,,"Any organooxygen compound derived from a carbohydrate by replacement of one or more hydroxy group(s) by an amino group, a thiol group or similar heteroatomic groups. The term also includes derivatives of these compounds.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:63299,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,carbohydrate derivative,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Any organooxygen compound derived from a carbohydrate by replacement of one or more hydroxy group(s) by an amino group, a thiol group or similar heteroatomic groups. The term also includes derivatives of these compounds.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000037,beef sirloin tip center steak,,A steak cut from the beef sirloin tip center roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000037,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef sirloin tip center steak,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A steak cut from the beef sirloin tip center roast.,,,,,,,,
http://purl.obolibrary.org/obo/OMIT_0018647,Disease Progression,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OMIT:0018647,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/omit.owl,,,,,,,,,Disease Progression,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490354,paper-paper combination,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0354,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490354,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,paper-paper combination,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510072,no animal fat added claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0072,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510072,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,no animal fat added claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020184,chicken organ (raw),,A raw animal organ that is obtained from a chicken during a butchery process.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020184,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,chicken organ (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw animal organ that is obtained from a chicken during a butchery process.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C71164,Animal Model,"Research Model, Animal|Animal Model, Generic|Animal Model",An animal that is amenable to experimentation and whose physiological or pathologic mechanisms are sufficiently similar to those of a human for the animal to serve as a model.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Research Model, Animal|Animal Model, Generic|Animal Model",,,,NCIT:C71164,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Animal Model,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An animal that is amenable to experimentation and whose physiological or pathologic mechanisms are sufficiently similar to those of a human for the animal to serve as a model.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_28001,vancomycin,,A complex glycopeptide from <em>Streptomyces orientalis</em>. It inhibits a specific step in the synthesis of the peptidoglycan layer in the Gram-positive bacteria <em>Staphylococcus aureus</em> and <em>Clostridium difficile</em>.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:9931|CHEBI:49941|CHEBI:27276,,,,,,CHEBI:28001,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,vancomycin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A complex glycopeptide from <em>Streptomyces orientalis</em>. It inhibits a specific step in the synthesis of the peptidoglycan layer in the Gram-positive bacteria <em>Staphylococcus aureus</em> and <em>Clostridium difficile</em>.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001393,host age unit,host age unit,A host data field which describes the units used to measure the host's age.,FALSE,,,,,,,PCDS:host_age_unit,,,,,,,"PCDS: If known, provide the age units used to measure the host's age from the pick list.",,,,,,,,,,,,,,PCDS: year,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,host age unit,host age unit slot,,,,GENEPIO:0001393,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,host age unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A host data field which describes the units used to measure the host's age.,,PCDS: The units used to measure the host's age.,,,,,,
http://purl.obolibrary.org/obo/sep_00196,specimen description,,A description of the biological sample analysed.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,sep:00196,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,specimen description,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A description of the biological sample analysed.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_4889,lymph node tuberculosis,,"An extrapulmonary tuberculosis that is located_in lymph node, and has_symptom lymphadenopathy, has_symptom fever, has_symptom weight loss, has_symptom fatigue, has_symptom night sweats and has_symptom cough.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:4889,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,lymph node tuberculosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An extrapulmonary tuberculosis that is located_in lymph node, and has_symptom lymphadenopathy, has_symptom fever, has_symptom weight loss, has_symptom fatigue, has_symptom night sweats and has_symptom cough.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000069,beef shoulder clod,,"A beef sub-primal cut consisting of a large, muscle-rich cut of beef from the shoulder region of a cow. It's made up of several muscles, including the top blade, shoulder tender, and clod heart.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000069,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef shoulder clod,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A beef sub-primal cut consisting of a large, muscle-rich cut of beef from the shoulder region of a cow. It's made up of several muscles, including the top blade, shoulder tender, and clod heart.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_22160,acetamides,,Compounds with the general formula RNHC(=O)CH<small><sub>3</sub></small>.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:22160,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,acetamides,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Compounds with the general formula RNHC(=O)CH<small><sub>3</sub></small>.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100423,sequenced by contact address,sequenced by contact address,A data field which describes the mailing address of the agency submitting the sequence.,FALSE,,,,,,,PCDS:sequenced_by_contact_address,,,,,,,"PCDS: The mailing address should be in the format: Street number and name, City, Province/Territory, Postal Code, Country",,,,,,,,,,,Not to be confused with 'sequence submitter contact address' http://purl.obolibrary.org/obo/GENEPIO_0001167,,,"PCDS: 123 Sunnybrooke St, Toronto, Ontario, M4P 1L6, Canada",,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,sequenced by contact address,sequenced by contact address slot,,,,GENEPIO:0100423,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,sequenced by contact address,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the mailing address of the agency submitting the sequence.,,PCDS: The mailing address of the agency submitting the sequence.,,,,,,
http://purl.obolibrary.org/obo/ENVO_02500000,environmental system process,,A process in which includes the components of an environmental system as participants.,FALSE,,,,,,,,,,,,,,This is a convenience class for organisation and should not be used for annotation.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:02500000,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,environmental system process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A process in which includes the components of an environmental system as participants.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100132,obsolete: PacBio RS II,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,Rehomed in OBI,,,,,,,,,,,,,,,,,,,GENEPIO:0100132,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: PacBio RS II,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/OBI_0002012,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510243,high monounsaturated fat,,"A claim that a food is high in monounsaturated fat, and any claim likely to have the same meaning for the consumer, may only be made where at least 45 % of the fatty acids present in the product derive from monounsaturated fat under the condition that monounsaturated fat provides more than 20 % of energy of the product [COMMISSION REGULATION (EU) No 116/2010 of 9 February 2010 amending Regulation (EC) No 1924/2006 of the European Parliament and of the Council with regard to the list of nutrition claims].",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0243,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510243,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,high monounsaturated fat,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A claim that a food is high in monounsaturated fat, and any claim likely to have the same meaning for the consumer, may only be made where at least 45 % of the fatty acids present in the product derive from monounsaturated fat under the condition that monounsaturated fat provides more than 20 % of energy of the product [COMMISSION REGULATION (EU) No 116/2010 of 9 February 2010 amending Regulation (EC) No 1924/2006 of the European Parliament and of the Council with regard to the list of nutrition claims].",,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000047,count,,a count is a data item denoted by an integer and representing the number of instances or occurences of an entity,FALSE,,,,,,,,,,,,,,"Damion Dooley's note: The result of the act of counting is a scalar number whose unit is a description of the thing being counted.  One can count 10 oranges and compare that to a count of 5 oranges.  One can generalize that a count of 5 oranges is a count of pieces of fruit.  One can then compare 5 oranges and 5 apples, fruitfully!|Damion Dooley's note: A count datum often implicity carries a date range for which the count is ascertained, or estimated, or simulated for.",,,,,,,STATO,,,,"Damion Dooley's note: Unfortunately an IAO ""count"" cannot be a subclass of immaterial entity ""linear coordinate"" as this leads to disjoint conflict.",,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000047,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,count,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra|Alejandra Gonzalez-Beltran|Orlaith Burke,,,,a count is a data item denoted by an integer and representing the number of instances or occurences of an entity,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_36420,acridine,,A polycyclic heteroarene that is anthracene in which one of the central CH groups is replaced by a nitrogen atom.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:36420,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,acridine,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A polycyclic heteroarene that is anthracene in which one of the central CH groups is replaced by a nitrogen atom.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03450018,boiling without draining,,Cooked in boiling water at 212 degrees F. The water incorporates itself into the product being cooked or is not discarded when cooking is complete.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=G0018,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03450018,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,boiling without draining,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Cooked in boiling water at 212 degrees F. The water incorporates itself into the product being cooked or is not discarded when cooking is complete.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C25690,Street Address,Street Address|Street|STREET|Address Line,The street name and building number where a person or organization is located.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Street Address|Street|STREET|Address Line,,,,NCIT:C25690,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Street Address,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The street name and building number where a person or organization is located.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510201,no beef added claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0201,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510201,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,no beef added claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03412345,lichen,,A composite organism that arises from algae or cyanobacteria living among filaments of multiple fungi species in a mutualistic relationship.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=B2345,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03412345,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lichen,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A composite organism that arises from algae or cyanobacteria living among filaments of multiple fungi species in a mutualistic relationship.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0003577,Congenital onset,Symptoms present at birth|Onset at birth,A phenotypic abnormality that is present at birth.,FALSE,,,,,,,,,,,,,,"Congenital onset literally means present at birth. Congenital abnormalities are thus generally acquired during fetal development. Congenital abnormalities are often but not always hereditary in nature. Whether a disease manifestation is diagnosed to be intrauterine or congenital may depend on the time at which diagnostic procedures are performed. Thus, most congenital abnormalities are also intrauterine. This term should be used for phenotypic abnormalities or diseases initially observed at the time of birth. For abnormalities observed prior to (e.g., by fetal ultrasound), use the term Antenatal onset (HP:0030674).",,,,,,,,,,,,,,,,,,UMLS:C2752013|UMLS:C1836142,,,,,,,,,,,,,,,,,,,,,,,HP:0003666|HP:0003660|HP:0003624|HP:0003601|HP:0003595,,Symptoms present at birth|Onset at birth,,,,HP:0003577,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,Congenital onset,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A phenotypic abnormality that is present at birth.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_35871,oxo monocarboxylic acid,,Any monocarboxylic acid having at least one additional oxo functional group.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:35871,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,oxo monocarboxylic acid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any monocarboxylic acid having at least one additional oxo functional group.,,,,,,,,
http://semanticscience.org/resource/SIO_000811,URL,,A Uniform Resource Locator or Universal Resource Locator (URL) is a specific character string that constitutes a reference to an Internet resource.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,resource:SIO_000811,,,,,,,,,,,,,,,,,,,,,,,,http://semanticscience.org/ontology/sio.owl,,,,,,,,,URL,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Uniform Resource Locator or Universal Resource Locator (URL) is a specific character string that constitutes a reference to an Internet resource.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490327,"regenerated cellulose film, coated",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0327,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490327,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"regenerated cellulose film, coated",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0002355,pelvic region of trunk,true pelvis|pelvis region|pelvis|pelvic region|lesser pelvis,"The lower segment of the trunk, inferioposterior to the abdomen proper, in the transition area between the trunk and the lower limbs.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:Pelvis|Wikipedia:Pelvis|UMLS:C0030797|SCTID:229765004|NCIT:C12767|MESH:D010388|MA:0000030|GAID:87|FMA:9578|EV:0100012|EMAPA:35931|EFO:0002805|CALOHA:TS-2227|BTO:0001006,,,,,,,,,,,,,,,,,,,,,,,,,true pelvis|pelvis region|pelvis|pelvic region|lesser pelvis,,,,UBERON:0002355,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,pelvic region of trunk,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The lower segment of the trunk, inferioposterior to the abdomen proper, in the transition area between the trunk and the lower limbs.",,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000029,watercourse,water gap|wash|tideway|stream|spillway|seaway|seachannel|runnel|run|rivulet|rill|reach|ravine|race|pup|passage|overflow channel|narrows|lode|kill|gutter|gut|gully|gulch|fork|dredged channel|culvert,A flowing body of water.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Watercourse|TGN:21499|TGN:21163|TGN:21137|TGN:21133|TGN:21131|TGN:21110|Geonames:S.SPLY|Geonames:H.WTRC|Geonames:H.RCH|Geonames:H.NRWS|FTT:105|EcoLexicon:waterway|EcoLexicon:spillway|EcoLexicon:ravine|EcoLexicon:gully|EcoLexicon:culvert|EcoLexicon:course|EcoLexicon:brook,,,,,,,,,,,,,,,,,,,,,,,,,,water gap|wash|tideway|stream|spillway|seaway|seachannel|runnel|run|rivulet|rill|reach|ravine|race|pup|passage|overflow channel|narrows|lode|kill|gutter|gut|gully|gulch|fork|dredged channel|culvert,,,ENVO:00000029,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,watercourse,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A flowing body of water.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0030163,Abnormal vascular physiology,,Abnormality of vascular function.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4022603,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0030163,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal vascular physiology,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Abnormality of vascular function.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100127,obsolete: Illumina NextSeq 500,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,Rehomed in OBI,,,,,,,,,,,,,,,,,,,GENEPIO:0100127,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: Illumina NextSeq 500,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/OBI_0002021,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100524,AMR measurement sign,antimicrobial resistance measurement sign|AMR_measurement_sign|AMR measurement sign,A data field which describes the qualifier associated with the antibiotic resistance (AMR) measurement.,FALSE,,,,,,,PCDS:amr_measurement_sign|PCDS:*_measurement_sign,,,,,,,PCDS: Select the comparator sign from the pick list provided. Use the Term Request System to request the addition of other signs if necessary.,,,,,,,,,,,Dependent on the units specified in the 'AMR measurement units field' [GENEPIO:0100523].,,,PCDS: greater than (>) [GENEPIO:0001006],,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,antimicrobial resistance measurement sign|AMR_measurement_sign|AMR measurement sign,antimicrobial resistance measurement sign slot|antimicrobial resistance measurement sign field|AMR measurement sign slot,,,,GENEPIO:0100524,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-12-22T00:55:53.808Z,,,,,,,,,,,,,,,,,,,AMR measurement sign,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the qualifier associated with the antibiotic resistance (AMR) measurement.,,PCDS: The qualifier associated with the antibiotic susceptibility measurement,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510065,nutrition-related claim,,"As defined in Corrigendum to Regulation (EC) No 1924/2006 of the European Parliament and of the Council of 20 December 2006 on nutrition and health claims made on foods, ""claim"" means any message or representation, which is not
mandatory under Community or national legislation, including pictorial, graphic or symbolic representation, in any form, which states, suggests or implies that a food has particular characteristics; specificly, ""nutrition claim""means any claim which states, suggests or implies that a food has particular beneficial nutritional properties
due to:

(a) the energy (calorific value) it (i) provides; (ii) provides at a reduced or increased rate; or (iii) does not provide;

and/or

(b) the nutrients or other substances it (i) contains; (ii) contains in reduced or  increased proportions; or (iii) does not contain.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0065,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510065,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,nutrition-related claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"As defined in Corrigendum to Regulation (EC) No 1924/2006 of the European Parliament and of the Council of 20 December 2006 on nutrition and health claims made on foods, ""claim"" means any message or representation, which is not
mandatory under Community or national legislation, including pictorial, graphic or symbolic representation, in any form, which states, suggests or implies that a food has particular characteristics; specificly, ""nutrition claim""means any claim which states, suggests or implies that a food has particular beneficial nutritional properties
due to:

(a) the energy (calorific value) it (i) provides; (ii) provides at a reduced or increased rate; or (iii) does not provide;

and/or

(b) the nutrients or other substances it (i) contains; (ii) contains in reduced or  increased proportions; or (iii) does not contain.",,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00003603,"populated place, Hungary",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00003603,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Hungary",http://purl.obolibrary.org/obo/GAZ_00002952,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HP_0032039,Abnormality of the ocular adnexa,,"An anomaly of the adjacent structures (i.e., adnexa) of the eye, defined as the lacrimal apparatus, the extraocular muscles and the eyelids, eyelashes, eyebrows and the conjunctiva.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0032039,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormality of the ocular adnexa,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An anomaly of the adjacent structures (i.e., adnexa) of the eye, defined as the lacrimal apparatus, the extraocular muscles and the eyelids, eyelashes, eyebrows and the conjunctiva.",,,,,,,,
http://purl.obolibrary.org/obo/ARO_3004303,nonsusceptible antimicrobial phenotype,nonsensitive antimicrobial phenotype|nonsensitive,"A bacterial strain is said to be nonsusceptible to a given antibiotic drug if it demonstrates either an intermediate or resistant phenotype when exposed to a concentration of a drug that is associated with a high likelihood of therapeutic failure, i.e. if the bacterial strain is not susceptible to the antibiotic drug but not necessarily totally resistant under all conditions. Definition from https://clsi.org.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NS,,nonsensitive antimicrobial phenotype|nonsensitive,,,,ARO:3004303,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/aro.owl,,,,,,,,,nonsusceptible antimicrobial phenotype,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A bacterial strain is said to be nonsusceptible to a given antibiotic drug if it demonstrates either an intermediate or resistant phenotype when exposed to a concentration of a drug that is associated with a high likelihood of therapeutic failure, i.e. if the bacterial strain is not susceptible to the antibiotic drug but not necessarily totally resistant under all conditions. Definition from https://clsi.org.",,,,nonsusceptible,,,,
http://purl.obolibrary.org/obo/UBERON_0003929,digestive tract epithelium,gut epithelium|gut epithelial tissue|gastrodermis|epithelium of gut|epithelium of digestive tract|epithelial tissue of gut|epithelial tissue of digestive tract|digestive tract epithelial tissue,An epithelium that lines the lumen of the digestive tract.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ZFA:0005123|XAO:0003200|UMLS:C0836205|TAO:0005123|NCIT:C12963|MA:0003201|FBbt:00047166|EMAPA:32928|EHDAA2:0004567|BTO:0000956,,,,,,,,,,,,,,,,,,,,,,,,,gut epithelium|gut epithelial tissue|gastrodermis|epithelium of gut|epithelium of digestive tract|epithelial tissue of gut|epithelial tissue of digestive tract|digestive tract epithelial tissue,,,,UBERON:0003929,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,digestive tract epithelium,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An epithelium that lines the lumen of the digestive tract.,,,,,,,,
http://purl.obolibrary.org/obo/IAO_0000029,numeral,,A symbol that denotes a number.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,numeral,,,,,http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,IAO:0000029,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/iao.owl,,,,,,,,,numeral,,,,,,,,,,,,,,,,,,,,,,,,,,,,PERSON: Jonathan Rees,,,,A symbol that denotes a number.,,,,,,,,
http://purl.obolibrary.org/obo/IAO_0000027,data entity,,"a data item is an information content entity that is intended to be a truthful statement about something (modulo, e.g., measurement precision or other systematic errors) and is constructed/acquired by a method which reliably tends to produce (approximately) truthful statements.|An information content entity that is intended to be one or more truthful statement(s) about something (modulo, e.g., measurement precision or other systematic errors) and is constructed/acquired by a method which reliably tends to produce (approximately) truthful statements.|An information content entity that is intended to be a truthful statement about something (modulo, e.g., measurement precision or other systematic errors) and is constructed/acquired by a method which reliably tends to produce (approximately) truthful statements.",FALSE,,,,,,,data item|data,,,,,,,,,,,,,,,,,,"JAR: datum     -- well, this will be very tricky to define, but maybe some 
information-like stuff that might be put into a computer and that is 
meant, by someone, to denote and/or to be interpreted by some 
process... I would include lists, tables, sentences... I think I might 
defer to Barry, or to Brian Cantwell Smith

JAR: A data item is an approximately justified approximately true approximate belief|2009-03-16: removed datum as alternative term as datum specifically refers to singular form, and is thus not an exact synonym.|2009-03-16: data item deliberatly ambiguous: we merged data set and datum to be one entity, not knowing how to define singular versus plural. So data item is more general than datum.|2/2/2009 Alan and Bjoern discussing FACS run output data. This is a data item because it is about the cell population. Each element records an event and is typically further composed a set of measurment data items that record the fluorescent intensity stimulated by one of the lasers.|2014-03-31: See discussion at http://odontomachus.wordpress.com/2014/03/30/aboutness-objects-propositions/",data item|data entity,,,,,http://purl.obolibrary.org/obo/IAO_0000125,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,IAO:0000027,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl|http://purl.obolibrary.org/obo/obib.owl|http://purl.obolibrary.org/obo/iao.owl|http://purl.obolibrary.org/obo/foodon.owl|http://purl.obolibrary.org/obo/cob.owl|http://purl.obolibrary.org/obo/apollo_sv.owl,,,,,,,,,data item|data entity,,,,,,,,,,,,,,,,,,,,,,,,,,,,PERSON: Jonathan Rees|PERSON: Chris Stoeckert|PERSON: Alan Ruttenberg,,,,"a data item is an information content entity that is intended to be a truthful statement about something (modulo, e.g., measurement precision or other systematic errors) and is constructed/acquired by a method which reliably tends to produce (approximately) truthful statements.|An information content entity that is intended to be one or more truthful statement(s) about something (modulo, e.g., measurement precision or other systematic errors) and is constructed/acquired by a method which reliably tends to produce (approximately) truthful statements.|An information content entity that is intended to be a truthful statement about something (modulo, e.g., measurement precision or other systematic errors) and is constructed/acquired by a method which reliably tends to produce (approximately) truthful statements.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020279,"piece of chicken breast (skinless, boneless)",,A piece of skinless and boneless chicken breast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020279,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"piece of chicken breast (skinless, boneless)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A piece of skinless and boneless chicken breast.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0002692,polymerase chain reaction assay,,An assay that uses polymerase chain reaction technique to amplify DNA.,FALSE,,,,,,,,,,,,,,,,,,,,,VEuPathDB,,,,,polymerase chain reaction assay,,,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0002692,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,polymerase chain reaction assay,,,,,,,,,,,,,,,,,,,,,,,,,,,,VEuPathDB,,,https://github.com/obi-ontology/obi/issues/1117,An assay that uses polymerase chain reaction technique to amplify DNA.,,,,,,,,
http://purl.obolibrary.org/obo/PATO_0001241,physical object quality,monadic quality of continuant|monadic quality of an object,A quality which inheres in a continuant.,FALSE,,,,,,,,,,,,,,Relational qualities are qualities that hold between multiple entities. Normal (monadic) qualities such as the shape of a eyeball exist purely as a quality of that eyeball. A relational quality such as sensitivity to light is a quality of that eyeball (and connecting nervous system) as it relates to incoming light waves/particles.,,,,,,,,,,,,,,,,,,snap:Quality,,,,,,,,,,,,,,,,,,,,,,,PATO:0001238|PATO:0001237,,quality of continuant|quality of an object|quality of a single physical entity|quality of a continuant|multiply inhering quality of a physical entity|monadic quality of a continuant,monadic quality of continuant|monadic quality of an object,,,PATO:0001241,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/vo.owl|http://purl.obolibrary.org/obo/pato.owl|http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,physical object quality,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A quality which inheres in a continuant.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03317478,"fish fillet (unprocessed, frozen)",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://bioregistry.io/reference/siren:F17478,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03317478,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"fish fillet (unprocessed, frozen)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HP_0011389,Functional abnormality of the inner ear,Functional abnormality of the inner ear,An abnormality of the function of the inner ear.,FALSE,,,,,,,,,,,,,,"The inner ear comprises the cochlea, three semicircular canals and the vestibule (labyrinth), and is directly responsible for hearing. Additionally, the vestibule and semicircular canals function to maintain balance or equilibrium.",,,,,,,,,,,,,,,,,,UMLS:C4023382,,,,,,,,,,,,,,,,,,,,,,,,,Functional abnormality of the inner ear,,,,HP:0011389,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Functional abnormality of the inner ear,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An abnormality of the function of the inner ear.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03450038,food reheating by microwave,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=G0038,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03450038,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food reheating by microwave,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_22260,adenosines,,Any purine ribonucleoside that is a derivative of adenosine.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:22260,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,adenosines,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any purine ribonucleoside that is a derivative of adenosine.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03460181,iron added claim,,A claim that iron has been added to an edible product.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=H0181,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03460181,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,iron added claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A claim that iron has been added to an edible product.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03480038,packed in olive oil,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=K0038,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03480038,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,packed in olive oil,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0100060,cultured cell population,,A processed material comprised of a collection of cultured cells that has been continuously maintained together in culture and shares a common propagation history.|A processed material comprised of a collection of cultured cells that has been continuously maintained together in culture and shares a common propagation history.,FALSE,,,,,,,cell culture sample,,,,,,,"The extent of a 'cultured cell population' is restricted only in that all cell members must share a propagation history (ie be derived through a common lineage of passages from an initial culture). In being defined in this way, this class can be used to refer to the populations that researchers actually use in the practice of science - ie are the inputs to culturing, experimentation, and sharing. The cells in such populations will be a relatively uniform population as they have experienced similar selective pressures due to their continuous co-propagation. And this population will also have a single passage number, again owing to their common passaging history. Cultured cell populations represent only a collection of cells (ie do not include media, culture dishes, etc), and include populations of cultured unicellular organisms or cultured multicellular organism cells. They can exist under active culture, stored in a quiescent state for future use, or applied experimentally.",,,,,,,PERSON:Matthew Brush,,,,"2013-6-5 MHB: This OBI class was formerly called 'cell culture', but label changed and definition updated following CLO alignment efforts in spring 2013, during which the intent of this class was clarified to refer to portions of a culture or line rather than a complete cell culture or line.",cultured cell population,,"A cultured cell population applied in an experiment: ""293 cells expressing TrkA were serum-starved for 18 hours and then neurotrophins were added for 10 min before cell harvest.""  (Lee, Ramee, et al. ""Regulation of cell survival by secreted proneurotrophins."" Science 294.5548 (2001): 1945-1948).

A cultured cell population maintained in vitro: ""Rat cortical neurons from 15 day embryos are grown in dissociated cell culture and maintained in vitro for 8–12 weeks"" (Dichter, Marc A. ""Rat cortical neurons in cell culture: culture methods, cell morphology, electrophysiology, and synapse formation."" Brain Research 149.2 (1978): 279-293).",,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0100060,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/clo.owl,,,,,,,,,cultured cell population,,,,,,,,,,,,,,,,,,,,,,,,,,,,PERSON:Matthew Brush,,,,A processed material comprised of a collection of cultured cells that has been continuously maintained together in culture and shares a common propagation history.|A processed material comprised of a collection of cultured cells that has been continuously maintained together in culture and shares a common propagation history.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100221,church exposure process,,A process occuring within or in the vicinity of a church that exposes the recipient organism to a material entity.,FALSE,,,,,,,Church,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100221,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,church exposure process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A process occuring within or in the vicinity of a church that exposes the recipient organism to a material entity.,,,,,,,,
http://www.ebi.ac.uk/efo/EFO_0004340,body mass index,Quetelet's Index|BMI,"An indicator of body density as determined by the relationship of BODY WEIGHT to BODY HEIGHT. BMI=weight (kg)/height squared (m2). BMI correlates with body fat (ADIPOSE TISSUE). Their relationship varies with age and gender. For adults, BMI falls into these categories: below 18.5 (underweight); 18.5-24.9 (normal); 25.0-29.9 (overweight); 30.0 and above (obese). (National Center for Health Statistics, Centers for Disease Control and Prevention)",FALSE,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Body_mass_index,,,,,,,,,,,SNOMEDCT:60621009|NCIt:C16358|MedDRA:10005894|MESH:D015992|ICD9:V85-V85.99,,,,,,,,,,,,,,,,,,,,,,,,,Quetelet's Index|BMI,,,,efo:EFO_0004340,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,body mass index,,,,,,,,,,,,,,,,,,,,,,,,,,,,Dani Welter,,,,"An indicator of body density as determined by the relationship of BODY WEIGHT to BODY HEIGHT. BMI=weight (kg)/height squared (m2). BMI correlates with body fat (ADIPOSE TISSUE). Their relationship varies with age and gender. For adults, BMI falls into these categories: below 18.5 (underweight); 18.5-24.9 (normal); 25.0-29.9 (overweight); 30.0 and above (obese). (National Center for Health Statistics, Centers for Disease Control and Prevention)",,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000325,Afrikaner,,A Southern African population with a population size of 2.8–3.5 million,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000325,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Afrikaner,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Southern African population with a population size of 2.8–3.5 million,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000327,British diaspora,,"A Southern African, Eastern African population with a population size of 2.5 millions",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000327,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,British diaspora,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A Southern African, Eastern African population with a population size of 2.5 millions",,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000328,Coloured,,A Southern African population with a population size of 4.7 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000328,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Coloured,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Southern African population with a population size of 4.7 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000326,Bantu Southern,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000326,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Bantu Southern,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000329,Goffel,,A Southern African population with a population size of 0.03 millions. People of mixed race claiming both European and African descent.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000329,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Goffel,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Southern African population with a population size of 0.03 millions. People of mixed race claiming both European and African descent.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002167,specimen collection site,,"The physical location that a specimen was collected at.  The location may be described by geographic coordinates, city or other geopolitical entity, biome, etc.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002167,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,specimen collection site,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/NCIT_C87913,,,,,,Damion Dooley,,,,"The physical location that a specimen was collected at.  The location may be described by geographic coordinates, city or other geopolitical entity, biome, etc.",,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00009433,Province (Mozambique),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00009433,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Province (Mozambique),http://purl.obolibrary.org/obo/GAZ_00001100,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00009431,Province (Angola),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00009431,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Province (Angola),http://purl.obolibrary.org/obo/GAZ_00001095,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/COB_0000022,organism,,A material entity that is a maximal functionally integrated unit that develops from a program encoded in a genome,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,COB:0000022,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl|http://purl.obolibrary.org/obo/cob.owl,,,,,,,,,organism,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A material entity that is a maximal functionally integrated unit that develops from a program encoded in a genome,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_35294,carbopolycyclic compound,,A polyclic compound in which all of the ring members are carbon atoms.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:35294,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,carbopolycyclic compound,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A polyclic compound in which all of the ring members are carbon atoms.,,,,,,,,
http://purl.obolibrary.org/obo/OBA_1000039,mollusc shell length,mollusc shell length trait|length of mollusc shell,The length of a mollusc shell.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,mollusc shell length trait|length of mollusc shell,,,,OBA:1000039,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/oba.owl,,,,,,,,,mollusc shell length,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The length of a mollusc shell.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_59793,monothioacetal,,"A thioacetal having the structure R<small><sub>2</sub></small>C(OR')(SR'). The term includes monothioketals, R ≠ H, as a subclass.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:59793,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,monothioacetal,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A thioacetal having the structure R<small><sub>2</sub></small>C(OR')(SR'). The term includes monothioketals, R ≠ H, as a subclass.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C113122,Blood Collection Tube,Blood Collection Tube|BCT,"A test tube, capillary tube, or other tube designed for the collection of blood.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Blood Collection Tube|BCT,,,,NCIT:C113122,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Blood Collection Tube,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A test tube, capillary tube, or other tube designed for the collection of blood.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C113124,Evacuated Blood Specimen Collection Tube,Evacuated Blood Specimen Collection Tube,"A blood collection tube that contains a vacuum, allowing it to draw blood through a needle to fill the tube.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Evacuated Blood Specimen Collection Tube,,,,NCIT:C113124,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Evacuated Blood Specimen Collection Tube,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A blood collection tube that contains a vacuum, allowing it to draw blood through a needle to fill the tube.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C18020,Diagnostic Procedure,diagnostic technique|diagnostic procedure|Evaluation Basis of Disease Status|Diagnostic Test|Diagnostic Technique|Diagnostic Procedure|Diagnostic Method|Diagnostic|DIAGNOSTIC TEST,Any procedure or test to diagnose a disease or disorder.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,diagnostic technique|diagnostic procedure|Evaluation Basis of Disease Status|Diagnostic Test|Diagnostic Technique|Diagnostic Procedure|Diagnostic Method|Diagnostic|DIAGNOSTIC TEST,,,,NCIT:C18020,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Diagnostic Procedure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any procedure or test to diagnose a disease or disorder.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000455,bison shoulder clod,,"A bison sub-primal cut which is  large muscle system which lies dorsal and posterior to the elbow joint, ventral and posterior to the ridge of the scapula (blade bone) and is anterior to the 6th rib.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000455,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,bison shoulder clod,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A bison sub-primal cut which is  large muscle system which lies dorsal and posterior to the elbow joint, ventral and posterior to the ridge of the scapula (blade bone) and is anterior to the 6th rib.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_36688,heterotricyclic compound,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:36688,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,heterotricyclic compound,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://www.ebi.ac.uk/efo/EFO_0004324,body weights and measures,body measures,"Measurements of the height, weight, length, area, etc., of the human and animal body or its parts.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MESH:D001837,,,,,,,,,,,,,,,,,,,,,,,,,body measures,,,,efo:EFO_0004324,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,body weights and measures,,,,,,,,,,,,,,,,,,,,,,,,,,,,Dani Welter,,,,"Measurements of the height, weight, length, area, etc., of the human and animal body or its parts.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102180,environmental surveillance sampling,,"A sampling strategy in which environments are systematically sampled to detect the presence or emergence of pathogens, contaminants, or other indicators without prior knowledge of an event.",FALSE,,,,,,,Environmental surveillance,,,,,,,,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102180,,,,,,,,,,,,,https://orcid.org/0000-0001-8008-8249,2026-04-13T19:52:38.515Z,,,,,,,,,,,,,,,,,,,environmental surveillance sampling,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A sampling strategy in which environments are systematically sampled to detect the presence or emergence of pathogens, contaminants, or other indicators without prior knowledge of an event.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000212,beef ribeye roll (raw),,A raw beef ribeye roll cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000212,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef ribeye roll (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef ribeye roll cut.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470154,preservation by adding inorganic acids or salts,,"Preservation by adding inorganic acids or salts (e.g. SO2, H2SO4, KNO4, NaNO3) to suppress or inhibit undesirable micro-organisms or enzyme activity.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0154,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470154,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,preservation by adding inorganic acids or salts,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Preservation by adding inorganic acids or salts (e.g. SO2, H2SO4, KNO4, NaNO3) to suppress or inhibit undesirable micro-organisms or enzyme activity.",,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000114,agricultural field,agricultural site,"A field which is located on land and used for agricultural purposes, such as the grazing of livestock or the cultivation of crops.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,TGN:21456|SWEETRealm:Field|Geonames:L.FLD|FTT:61|FTT:45|EcoLexicon:field,,,,,,,,,,,,,,,,,,,,,,,,agricultural site,,,,,ENVO:00000114,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,agricultural field,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A field which is located on land and used for agricultural purposes, such as the grazing of livestock or the cultivation of crops.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002096,read adapter trimming software,,The name and version of the software product used for removal of adapter sequences from demultiplexed data reads,FALSE,,,,,,,,,,,,,,,,,,,,,GROUP: IRIDA Ontology (Emma),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002096,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,,,,,,,read adapter trimming software,,,,,Sequencing,,,,,,,,,,,,,,,,,,,,,,,,,,,The name and version of the software product used for removal of adapter sequences from demultiplexed data reads,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490149,tinless steel plate container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0149,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490149,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,tinless steel plate container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_51143,nitrogen molecular entity,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:7594|CHEBI:25556,,,,,,CHEBI:51143,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,nitrogen molecular entity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530031,loin,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0031,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530031,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,loin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0005154,liver disorder,liver disorder|liver disease or disorder|liver disease|liver and intrahepatic bile duct disorder|hepatic disorder|hepatic disease|disorder of liver|disease or disorder of liver|disease of liver,A disease involving the liver.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,icd11.foundation:1784240230|UMLS:C4021780|SCTID:235856003|NCIT:C3196|MESH:D008107|MEDGEN:893061|ICD9:573.9|ICD9:573.8|ICD10CM:K70-K77|EFO:0001421|DOID:409,,,,,,,,,,,,,,,,,,,,,,,,,liver disorder|liver disease or disorder|liver disease|liver and intrahepatic bile duct disorder|hepatic disorder|hepatic disease|disorder of liver|disease or disorder of liver|disease of liver,,,,MONDO:0005154,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,liver disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A disease involving the liver.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0001621,longitude coordinate measurement datum,,A measurement datum that is the measure of the longitude coordinate of a site.,FALSE,,,,,,,longitude,,,,,,,,,,,,,,NIAID GSCID-BRC metadata working group,,,,,longitude coordinate measurement datum,,,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0001621,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,longitude coordinate measurement datum,,,,,,,Specimen Collection Location - Longitude,,,,,,,,,,,,,,,,,,,,,"Person: Chris Stoeckert, Jie Zheng",,,,A measurement datum that is the measure of the longitude coordinate of a site.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0000922,embryo,embryonic organism,"Anatomical entity that comprises the organism in the early stages of growth and differentiation that are characterized by cleavage, the laying down of fundamental tissues, and the formation of primitive organs and organ systems. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://neurolex.org/wiki/Category:Embryonic_organism|ZFA:0000103|XAO:0000113|Wikipedia:Embryo|VHOG:0001766|UMLS:C0013935|SCTID:57991002|OGEM:000001|NCIT:C28147|MIAA:0000019|MESH:D004622|MAT:0000226|IDOMAL:0000646|GAID:963|FMA:69068|FBbt:00000052|EMAPA:16039|EHDAA:38|EHDAA2_RETIRED:0003236|EHDAA2:0000002|EFO:0001367|CALOHA:TS-0229|BTO:0000379|BSA:0000039|BILA:0000056|AEO:0000169|AAO:0011035,,,,,,,,,,,,,,,,,,,,,,,,,embryonic organism,,,,UBERON:0000922,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,embryo,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Anatomical entity that comprises the organism in the early stages of growth and differentiation that are characterized by cleavage, the laying down of fundamental tissues, and the formation of primitive organs and organ systems. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant.",,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000639,percentage,,"A ratio formed between a numerator and a denominator (both described by the same unit), and that is multiplied by 100.",FALSE,,,,,,,%,,,,,,,,,,,,,,COKA/SEVCO/STATO,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000639,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,percentage,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Brian S. Alper, Harold Lehmann, Joanne Dehnbostel, Kenneth Wilkins, Janice Tufte, Muhammad Afzal, Khalid Shahin, Philippe Rocca-Serra",,,,"A ratio formed between a numerator and a denominator (both described by the same unit), and that is multiplied by 100.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000042,beef eye of round roast (raw),,A raw beef eye of round roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000042,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef eye of round roast (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef eye of round roast.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002053,obsolete: Vitek,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002053,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: Vitek,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ARO_3004403,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000199,beef shank cross-cut,,A cross-section of beef leg.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000199,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef shank cross-cut,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A cross-section of beef leg.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_4300174,actinopterygian pyloric caecum,pyloric caecum|pyloric caeca|pyloric appendage,A finger-like out-pocketing of the intestine where it meets the end of the stomach (pylorus). Also spelled cecum (ceca). Serves to aid digestion.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,TAO:0002253,,,,,,,,,,,,,,,,,,,,,,,,,pyloric caecum|pyloric caeca|pyloric appendage,,,,UBERON:4300174,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,actinopterygian pyloric caecum,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A finger-like out-pocketing of the intestine where it meets the end of the stomach (pylorus). Also spelled cecum (ceca). Serves to aid digestion.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100466,isolate received date,isolate_received_date|isolate received date,A date field which describes the date on which the isolate was received by the laboratory.,FALSE,,,,,,,PCDS:isolate_received_date,,,,,,,"PCDS: Provide the date according to the ISO 8601 standard 'YYYY-MM-DD', 'YYYY-MM' or 'YYYY'.",,,,,,,,,,,,,,PCDS: 2020-11-15,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,isolate_received_date|isolate received date,isolate received date slot,,,,GENEPIO:0100466,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,isolate received date,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A date field which describes the date on which the isolate was received by the laboratory.,,PCDS: The date on which the isolate was received by the laboratory.,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510033,low energy food claim,,"A claim that a food is low in energy, and any claim likely to have the same meaning for the consumer, may only be made where the product does not contain more than 40 kcal (170 kJ)/100 g for solids or more than 20 kcal (80 kJ)/100 ml for liquids. For table-top sweeteners the limit of 4 kcal (17 kJ)/portion, with equivalent sweetening properties to 6 g of sucrose (approximately 1 teaspoon of sucrose), applies [REGULATION (EC) No 1924/2006 Corrigendum 2007-01-18].

Food having 40 calories or less per amount customarily consumed (and per 50 grams of food if the amount customarily consumed is small). Meals and main dishes contain 120 calories or less per 100 grams of food [US FDA]",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0033,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510033,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,low energy food claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A claim that a food is low in energy, and any claim likely to have the same meaning for the consumer, may only be made where the product does not contain more than 40 kcal (170 kJ)/100 g for solids or more than 20 kcal (80 kJ)/100 ml for liquids. For table-top sweeteners the limit of 4 kcal (17 kJ)/portion, with equivalent sweetening properties to 6 g of sucrose (approximately 1 teaspoon of sucrose), applies [REGULATION (EC) No 1924/2006 Corrigendum 2007-01-18].

Food having 40 calories or less per amount customarily consumed (and per 50 grams of food if the amount customarily consumed is small). Meals and main dishes contain 120 calories or less per 100 grams of food [US FDA]",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C37984,Laboratory,Laboratory|Lab|LABORATORY,"A facility equipped and competent to conduct scientific experiments, observations, tests, investigations, and/or to manufacture chemicals or medical products.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Laboratory|Lab|LABORATORY,,,,NCIT:C37984,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Laboratory,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A facility equipped and competent to conduct scientific experiments, observations, tests, investigations, and/or to manufacture chemicals or medical products.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02021011,piece of buffalo,,A severed part of a buffalo.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02021011,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of buffalo,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A severed part of a buffalo.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000037,soluble inorganic material,,"A test specification which describes the concentration of substances such as ammonia, road-salt, sea-salt, cyanide, hydrogen sulfide, thiocyanates and thiosulfate in a sample.",FALSE,,,,,,,,,,,,,,,,,,,,,GROUP: MIxS enviro package,,,,,,,soluble organic material name;measurement value,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000037,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,,,,,,,soluble inorganic material,,,,,Environmental Isolate,,,,,,,,,,,,,,,,,,,,,,Soluble inorganic material,,,GROUP: MIxS,,"A test specification which describes the concentration of substances such as ammonia, road-salt, sea-salt, cyanide, hydrogen sulfide, thiocyanates and thiosulfate in a sample.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0011185,gastrointestinal sphincter,,A sphincter muscle that is part of the gastrointestinal system.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C1517464|NCIT:C32669,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0011185,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,gastrointestinal sphincter,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A sphincter muscle that is part of the gastrointestinal system.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0363,French,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0363,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,French,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0368,Hungarian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0368,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Hungarian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0362,Falkland Islander,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0362,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Falkland Islander,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0365,Gibraltarian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0365,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Gibraltarian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0366,Greek,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0366,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Greek,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0360,Estonian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0360,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Estonian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0367,Greenlander,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0367,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Greenlander,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0364,German,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0364,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,German,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0361,Faroese,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0361,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Faroese,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0369,Icelandic,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0369,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Icelandic,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0001616,specimen identifier,,A CRID symbol denotes a specimen and used to distinguish one specimen from another in an investigation.,FALSE,,,,,,,specimen ID,,,,,,,,,,,,,,NIAID GSCID-BRC metadata working group,,,,,specimen identifier,,,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,sample identifier,,,,,,,,OBI:0001616,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,specimen identifier,,,,,,,Specimen ID,,,,,,,,,,,,,,,,,,,,,"Person: Chris Stoeckert, Jie Zheng",,,,A CRID symbol denotes a specimen and used to distinguish one specimen from another in an investigation.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0002321,Vertigo,Dizzy spell,An abnormal sensation of spinning while the body is actually stationary.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0042571|UMLS:C0012833|SNOMEDCT_US:404640003|SNOMEDCT_US:399153001|SNOMEDCT_US:399090003|SNOMEDCT_US:271789005,,,,,,,,,,,,,,,,,,,,,,,,,Dizzy spell,,,,HP:0002321,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Vertigo,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An abnormal sensation of spinning while the body is actually stationary.,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_404399,Escherichia coli O26,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,Escherichia coli O26,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:404399,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Escherichia coli O26,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_404394,Escherichia coli O26:NM,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,Escherichia coli O26:NM,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:404394,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Escherichia coli O26:NM,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000112,area of tundra,,A vegetated area which is part of a tundra ecosystem.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,TGN:21611|LTER:605|Geonames:V.TUND|FTT:152|FTT:151|EcoLexicon:tundra|http://www.eionet.europa.eu/gemet/concept/8704|http://sweetontology.net/realmCryo/Tundra,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00000112,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,envoPolar,,,,,,,,area of tundra,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A vegetated area which is part of a tundra ecosystem.,,,,,,,,
http://purl.obolibrary.org/obo/PATO_0001018,physical quality,relational physical quality,A quality of a physical entity that exists through action of continuants at the physical level of organisation in relation to other entities.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Physical_property,,,,,,,,,,,,,,,,,,,,,,,PATO:0002079,,relational physical quality,,,,PATO:0001018,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/vo.owl|http://purl.obolibrary.org/obo/pato.owl,http://purl.oboInOwllibrary.org/oboInOwl/pato#attribute_slim|http://purl.oboInOwlInOwllibrary.org/oboInOwlInOwl/pato#attribute_slim,,,,,,,,physical quality,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A quality of a physical entity that exists through action of continuants at the physical level of organisation in relation to other entities.,,,,,,,,
http://purl.obolibrary.org/obo/PATO_0001019,mass density,,A physical quality which inheres in a bearer by virtue of some influence is exerted by the bearer's mass per unit size.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PATO:0001019,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/pato.owl,http://purl.oboInOwllibrary.org/oboInOwl/pato#scalar_slim|http://purl.oboInOwllibrary.org/oboInOwl/pato#attribute_slim,,,,,,,,mass density,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A physical quality which inheres in a bearer by virtue of some influence is exerted by the bearer's mass per unit size.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0600016,pooling specimens,,physical combination of several instances of like material,FALSE,,,,,,,sample pooling,,,,,,,,,,,,,like' is one of the things that you should be controling for in a well-designed experiment. The instances of material need to have the same class.,OBI branch derived,,,,,pooling specimens,,"http://www.pubmedcentral.nih.gov/articlerender.fcgi?artid=104564; Combining spleens of 20 mice, Combining supernatant from a cell culture obtained at different time points",,,http://purl.obolibrary.org/obo/IAO_0000125,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/OBI_0100051,http://purl.obolibrary.org/obo/BFO_0000040,,,,,,,,,,OBI:0600016,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,pooling specimens,,,,,,,,,,,,,,,,,,,,,,,,,,,,PlanAndPlannedProcess Branch,,,,physical combination of several instances of like material,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002001,draft tuberculosis - case subject characteristics,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002001,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,draft tuberculosis - case subject characteristics,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03430115,"divided into pieces, thickness 0.3-1.5 cm.",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=E0115,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03430115,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"divided into pieces, thickness 0.3-1.5 cm.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HP_0000206,Glossitis,Smooth swollen tongue|Lingual inflammation|Inflammation of the tongue,Inflammation of the tongue.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0017675|SNOMEDCT_US:45534005,,,,,,,,,,,,,,,,,,,,,,,,,Smooth swollen tongue|Lingual inflammation|Inflammation of the tongue,,,,HP:0000206,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,http://purl.oboInOwllibrary.org/oboInOwl/hp#hposlim_core,,,,,,,,Glossitis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Inflammation of the tongue.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000318,pork leg center slice (raw),,A raw pork leg center slice that is raw.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000318,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pork leg center slice (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw pork leg center slice that is raw.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0002796,medical gown,,A personal protective clothing item which is a gown worn by a medical professional in order to provide a barrier between patient and professional.,FALSE,,,,,,,hospital gown,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Medical_gown,,,,,medical gown,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0002796,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,medical gown,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://orcid.org/0000-0002-8844-9165,,,https://github.com/obi-ontology/obi/issues/1193,A personal protective clothing item which is a gown worn by a medical professional in order to provide a barrier between patient and professional.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001789,symptom cessation date,,A symptom cessation date is a date-time entity that marks the end of one or more reported symptoms pertaining to an episode of human or animal illness,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001789,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,symptom cessation date,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A symptom cessation date is a date-time entity that marks the end of one or more reported symptoms pertaining to an episode of human or animal illness,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000056,beef chuck eye roast,,"A roast cut from any portion of the chuck eye roll, typically the center.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000056,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef chuck eye roast,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A roast cut from any portion of the chuck eye roll, typically the center.",,,,,,,,
http://purl.obolibrary.org/obo/HP_0003270,Abdominal distention,Distended abdomen|Bloating|Belly bloating|Abdominal swelling|Abdominal distension|Abdominal bloating,Distention of the abdomen.,FALSE,,,,,,,,,,,,,,Abdominal distention can be a secondary feature associated with a number of conditions such as bowel obstruction.,,,,,,,,,,,,,,,,,,UMLS:C0000731|SNOMEDCT_US:60728008|SNOMEDCT_US:41931001,,,,,,,,,,,,,,,,,,,,,,,HP:0003364|HP:0001542,,Distended abdomen|Bloating|Belly bloating|Abdominal swelling|Abdominal distension|Abdominal bloating,,,,HP:0003270,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,http://purl.oboInOwllibrary.org/oboInOwl/hp#hposlim_core,,,,,,,,Abdominal distention,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Distention of the abdomen.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03480046,packed in animal fat or oil,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=K0046,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03480046,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,packed in animal fat or oil,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002080,obsolete: drug minimum inhibitory concentration unit,,The unit provided for an antibiotic drug test dosage.,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002080,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: drug minimum inhibitory concentration unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,http://purl.obolibrary.org/obo/ARO_3004372,,,The unit provided for an antibiotic drug test dosage.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020235,"chicken breast (skinless, boneless)",,A skinless and boneless chicken breast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020235,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"chicken breast (skinless, boneless)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A skinless and boneless chicken breast.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001219,jacuzzi water,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001219,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,jacuzzi water,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490343,"paperboard container, surface treated inside",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0343,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490343,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"paperboard container, surface treated inside",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C35814,Hematopoietic and Lymphatic System Disorder,Hematopoietic and Lymphoid System Disorder|Hematopoietic and Lymphatic System Disorder,A non-neoplastic or neoplastic disorder that affects the hematopoietic and lymphatic system.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Hematopoietic and Lymphoid System Disorder|Hematopoietic and Lymphatic System Disorder,,,,NCIT:C35814,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Hematopoietic and Lymphatic System Disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A non-neoplastic or neoplastic disorder that affects the hematopoietic and lymphatic system.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020017,animal breast (with skin),,An animal breast that contains skin.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020017,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,animal breast (with skin),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An animal breast that contains skin.,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_3109569,Mus musculus domesticus x Mus musculus castaneus,,,FALSE,,,,,,,Mus musculus castaneus x Mus musculus domesticus,,,,,,,,,,,,,,,,,,,Mus musculus domesticus x Mus musculus castaneus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:3109569,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Mus musculus domesticus x Mus musculus castaneus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_6030,isoniazide,,A carbohydrazide obtained by formal condensation between pyridine-4-carboxylic acid and hydrazine.,FALSE,,,,,,,isoniazid|Inh,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:6030,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,isoniazide,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A carbohydrazide obtained by formal condensation between pyridine-4-carboxylic acid and hydrazine.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000163,mass percentage,weight-weight percentage|w/w,A dimensionless concentration unit which denotes the mass of a substance in a mixture as a percentage of the mass of the entire mixture.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,weight-weight percentage|w/w,,,,UO:0000163,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,mass percentage,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A dimensionless concentration unit which denotes the mass of a substance in a mixture as a percentage of the mass of the entire mixture.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000165,volume percentage,% (v/v),A dimensionless concentration unit which denotes the volume of the solute in mL per 100 mL of the resulting solution.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,% (v/v),,,,UO:0000165,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,volume percentage,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A dimensionless concentration unit which denotes the volume of the solute in mL per 100 mL of the resulting solution.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000164,mass volume percentage,weight-volume percentage|(w/v),A dimensionless concentration unit which denotes the mass of the substance in a mixture as a percentage of the volume of the entire mixture.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,weight-volume percentage|(w/v),,,,UO:0000164,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,mass volume percentage,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A dimensionless concentration unit which denotes the mass of the substance in a mixture as a percentage of the volume of the entire mixture.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100078,drug abuse,,The use of a drug for a reason other than which it was intended or in a manner or in quantities other than directed.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100078,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,drug abuse,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The use of a drug for a reason other than which it was intended or in a manner or in quantities other than directed.,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_244317,Escherichia coli O128:H2,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,Escherichia coli O128:H2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:244317,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Escherichia coli O128:H2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_244319,Escherichia coli O26:H11,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,Escherichia coli O26:H11,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:244319,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Escherichia coli O26:H11,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/SO_0000001,region,sequence,A sequence_feature with an extent greater than zero. A nucleotide region is composed of bases and a polypeptide region is composed of amino acids.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,sequence,,,,SO:0000001,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/so.owl,http://purl.oboInOwllibrary.org/oboInOwl/so#SOFA,,,,,,,,region,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A sequence_feature with an extent greater than zero. A nucleotide region is composed of bases and a polypeptide region is composed of amino acids.,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000343,Sotho,,A Bantu Southern population with a population size of 7.130 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000343,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Sotho,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Bantu Southern population with a population size of 7.130 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000348,Kalanga,,A Shona population with a population size of 0.75 million,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000348,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Kalanga,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Shona population with a population size of 0.75 million,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000346,Yeyi,,A Bantu Southern population with a population size of 0.3 million,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000346,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Yeyi,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Bantu Southern population with a population size of 0.3 million,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000345,Venda,,A Bantu Southern population with a population size of 1 million,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000345,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Venda,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Bantu Southern population with a population size of 1 million,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000347,Pedi,,A Sotho population with a population size of 4.7 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000347,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Pedi,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Sotho population with a population size of 4.7 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000344,Tonga,,"A Bantu Southern, Bantu Eastern population with a population size of 2 millions",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000344,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Tonga,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A Bantu Southern, Bantu Eastern population with a population size of 2 millions",,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000341,Ovambo,,A Bantu Southern population with a population size of 1.6 million,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000341,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Ovambo,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Bantu Southern population with a population size of 1.6 million,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000342,Shona,,"A Bantu Southern, Bantu Eastern population with a population size of 10.6 millions",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000342,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Shona,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A Bantu Southern, Bantu Eastern population with a population size of 10.6 millions",,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000340,Nguni,,A Bantu Southern population with a population size of > 28 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000340,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Nguni,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Bantu Southern population with a population size of > 28 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000349,Nambya,,A Shona population with a population size of 0.1 million,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000349,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Nambya,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Shona population with a population size of 0.1 million,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_32066,Prothionamide,,,FALSE,,,,,,,Pto,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:93717,,,,,,CHEBI:32066,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,Prothionamide,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001409,host exposure information field category,PCDS:host exposure information,A data field category which refers to host exposure information fields.,FALSE,,,,,,,PCDS:host_exposure_information_slot_group,,,,,,,,,,,,,,,,,,,,,,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,PCDS:host exposure information,host exposure information slot category,,,,GENEPIO:0001409,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,host exposure information field category,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field category which refers to host exposure information fields.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_18208,benzylpenicillin,,A penicillin in which the substituent at position 6 of the penam ring is a phenylacetamido group.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:7962|CHEBI:45073|CHEBI:25866|CHEBI:14743,,,,,,CHEBI:18208,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,benzylpenicillin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A penicillin in which the substituent at position 6 of the penam ring is a phenylacetamido group.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0015878,common iliac lymph node,iliac lymph node|common iliac node,"The external iliac lymph nodes, from eight to ten in number, lie along the external iliac vessels. They are arranged in three groups, one on the lateral, another on the medial, and a third on the anterior aspect of the vessels; the third group is, however, sometimes absent. Their principal afferents are derived from the inguinal lymph nodes, the deep lymphatics of the abdominal wall below the umbilicus and of the adductor region of the thigh, and the lymphatics from the glans penis vel clitoridis, the membranous urethra, the prostate, the fundus of the urinary bladder, the cervix uteri, and upper part of the vagina.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:External_iliac_lymph_nodes|UMLS:C0229807|SCTID:314889004|NCIT:C32761|MA:0003066|FMA:12806,,,,,,,,,,,,,,,,,,,,,,,,,iliac lymph node|common iliac node,,,,UBERON:0015878,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,common iliac lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The external iliac lymph nodes, from eight to ten in number, lie along the external iliac vessels. They are arranged in three groups, one on the lateral, another on the medial, and a third on the anterior aspect of the vessels; the third group is, however, sometimes absent. Their principal afferents are derived from the inguinal lymph nodes, the deep lymphatics of the abdominal wall below the umbilicus and of the adductor region of the thigh, and the lymphatics from the glans penis vel clitoridis, the membranous urethra, the prostate, the fundus of the urinary bladder, the cervix uteri, and upper part of the vagina.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0015876,pelvic lymph node,lymph node of pelvis,Any lymph node within the abdominal pelvic region.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0729595|SCTID:245352009|NCIT:C12363|FMA:12800,,,,,,,,,,,,,,,,,,,,,,,,,lymph node of pelvis,,,,UBERON:0015876,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,pelvic lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any lymph node within the abdominal pelvic region.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0015872,mandibular lymph node,nodus mandibularis|mandibular node,The mandibular lymph node is a lymph node found near the jaw.,FALSE,,,,,,,,,,,,,,"Editor nodes: consider merging with submandibular, at least for mouse, see http://www.ncbi.nlm.nih.gov/pubmed/16624319",,,,,,,,,,,,,,,,,,Wikipedia:Mandibular_lymph_node|SCTID:10664000|MA:0003067|FMA:61227,,,,,,,,,,,,,,,,,,,,,,,,,nodus mandibularis|mandibular node,,,,UBERON:0015872,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,mandibular lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The mandibular lymph node is a lymph node found near the jaw.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0015870,lymph node of head,,A lymph node that is part of a head.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SCTID:155136006|FMA:61212,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0015870,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,lymph node of head,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A lymph node that is part of a head.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0015877,parietal pelvic lymph node,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:66193,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0015877,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,parietal pelvic lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0015871,facial lymph node,buccal lymph node,Any of the lymph nodes that are part of a face.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Facial_lymph_nodes|SCTID:279139005|FMA:61222,,,,,,,,,,,,,,,,,,,,,,,,,buccal lymph node,,,,UBERON:0015871,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,facial lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any of the lymph nodes that are part of a face.,,,,,,,,
http://purl.obolibrary.org/obo/OBA_2001004,age of onset of cataract,age cataract symptoms begin|age at onset of cataract,The age at which cataract manifestations first appear.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,age cataract symptoms begin|age at onset of cataract,,,,OBA:2001004,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age of onset of cataract,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The age at which cataract manifestations first appear.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C34144,Embryonic Structure or System,Embryonic Structure or System|Embryologic Structure or System,"Body tissue, region, surface, cavity, fluid, organ, or collection of organs present in, or associated with, an embryo.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Embryonic Structure or System|Embryologic Structure or System,,,,NCIT:C34144,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Embryonic Structure or System,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Body tissue, region, surface, cavity, fluid, organ, or collection of organs present in, or associated with, an embryo.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03430141,cut into long pieces,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=E0141,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03430141,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,cut into long pieces,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490155,paperboard container with liner,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0155,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490155,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,paperboard container with liner,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001603,array project method,,Select Array if that is the primary method and no sequence data is submitted,FALSE,,,,,,,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/books/NBK54364/,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001603,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,array project method,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,Select Array if that is the primary method and no sequence data is submitted,,,,array,,,,
http://purl.obolibrary.org/obo/ENVO_03501210,control panel,panel|instrument panel|instrument board|indicator panel|display panel|display board|control unit|control board|console,A manufactured product consisting of a panel on which control or monitoring instruments are set.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,panel|instrument panel|instrument board|indicator panel|display panel|display board|control unit|control board|console,,,,ENVO:03501210,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,control panel,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A manufactured product consisting of a panel on which control or monitoring instruments are set.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100243,family gathering exposure datum,,A human social event in which human family members congregate.,FALSE,,,,,,,Family Gathering,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100243,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,family gathering exposure datum,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A human social event in which human family members congregate.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490370,low density polyethylene container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0370,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490370,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,low density polyethylene container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_32955,epoxide,,Any cyclic ether in which the oxygen atom forms part of a 3-membered ring.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:4812|CHEBI:23930|CHEBI:13828,,,,,,CHEBI:32955,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,epoxide,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any cyclic ether in which the oxygen atom forms part of a 3-membered ring.,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0005560,brain disorder,encephalopathy,A disease affecting the brain or part of the brain.,FALSE,,,,,,,,,,,,,,Editor note: NCIT has different classes for brain disease and encephalopathy,,,,,,,,,,,,,,,,,,UMLS:C0006111|SCTID:81308009|NCIT:C96413|MESH:D001927|MEDGEN:14214|ICD9:348.9|ICD9:348.8|ICD9:348.30|ICD9:348.3|EFO:0005774|DOID:936,,,,,,,,,,,,,,,,,,,,,,,,,disorder of brain|disease or disorder of brain|disease of brain|brain disease or disorder|brain disease,encephalopathy,,,MONDO:0005560,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,brain disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A disease affecting the brain or part of the brain.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100899,caecal content,,"Undigested food material, microbiota, and other materials found in the cecum",FALSE,,,,,,,,,,,,,,,,,,,,,https://www.britannica.com/science/cecum,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100899,,,,,,,,,,,,,https://orcid.org/0000-0001-5275-8866,2023-11-28T13:29:31Z,,,,,,,,,,,,,,,,,,,caecal content,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Undigested food material, microbiota, and other materials found in the cecum",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0037480,supramammary lymph node,supramammary node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:12785,,,,,,,,,,,,,,,,,,,,,,,,,supramammary node,,,,UBERON:0037480,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,supramammary lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_4033,bacterial gastritis,,"A gastritis that involves inflammation of the stomach lining caused by bacteria. The disease has_symptom abdominal pain, has_symptom indigestion, has_symptom ulcer formation, has_symptom abdominal bloating, has_symptom nausea and has_symptom vomiting.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:4033,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,bacterial gastritis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A gastritis that involves inflammation of the stomach lining caused by bacteria. The disease has_symptom abdominal pain, has_symptom indigestion, has_symptom ulcer formation, has_symptom abdominal bloating, has_symptom nausea and has_symptom vomiting.",,,,,,,,
http://purl.obolibrary.org/obo/APOLLO_SV_00000267,time delay to case detection,,The duration from the time an organism satisfies a case definition until a process or system detects the organism as satisfying that case definition,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,APOLLO_SV:00000267,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/apollo_sv.owl,,,,,,,,,time delay to case detection,,,,,,,,,,,,,,,,,,,,,,,,,,,,Mathias Brochhausen,,,,The duration from the time an organism satisfies a case definition until a process or system detects the organism as satisfying that case definition,,,,,,,,
http://purl.obolibrary.org/obo/APOLLO_SV_00000265,infection acquisition from infectious host,,An infection acquisition whereby a susceptible host acquires an infection from an infectious host.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,APOLLO_SV:00000265,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/apollo_sv.owl,,,,,,,,,infection acquisition from infectious host,,,,,,,,,,,,,,,,,,,,,,,,,,,,William R. Hogan,,,,An infection acquisition whereby a susceptible host acquires an infection from an infectious host.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0870,Papuan,,Individuals who either self-report or have been described by authors as Papuan.,FALSE,,,,,,,,,,,,,,"It should be noted that individuals characterised with this term may be part of ethnic groups in countries other than Papua New Guinea, such as Indonesia, which is why this term is broader than Papua New Guinean (HANCESTRO:0476)",,,,,,,PMID:34202821|PMID:32483274,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0870,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Papuan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Individuals who either self-report or have been described by authors as Papuan.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0871,Balinese,,Individuals who either self-report or have been described by authors as Balinese.,FALSE,,,,,,,,,,,,,,,,,,,,,PMID:35341056|PMID:16114819,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0871,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Balinese,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Individuals who either self-report or have been described by authors as Balinese.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0873,Yagua,,Individuals who self-identify or are reported by authors as belonging to the Yagua indigenous population that inhabits the Peruvian Amazon. The Yagua language is the only surviving language of the Peba-Yagua linguistic family.,FALSE,,,,,,,,,,,,,,,,,,,,,http://www.amazon-indians.org/page17.html|PMID:38076857|PMID:36429736|PMID:25522106,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0873,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Yagua,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Individuals who self-identify or are reported by authors as belonging to the Yagua indigenous population that inhabits the Peruvian Amazon. The Yagua language is the only surviving language of the Peba-Yagua linguistic family.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0875,Shipibo-Conibo,,"Individuals who self-identify or are reported by authors as belonging to the Shipibo-Conibo indigenous population along the Ucayali River in the Amazon rainforest in Peru. Formerly two groups, they eventually became one tribe through intermarriage and communal rituals and are currently known as the Shipibo-Conibo people.",FALSE,,,,,,,,,,,,,,,,,,,,,PMID:2705014|PMID:22515992|PMID:15798863,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0875,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Shipibo-Conibo,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Individuals who self-identify or are reported by authors as belonging to the Shipibo-Conibo indigenous population along the Ucayali River in the Amazon rainforest in Peru. Formerly two groups, they eventually became one tribe through intermarriage and communal rituals and are currently known as the Shipibo-Conibo people.",,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0874,Kukama Kukamiria,Kukama Kukamilla,"Individuals who self-identify or are reported by authors as belonging to the Kukama Kukamiria indigenous population in the Peruvian Amazon. Their language, also called Kukama-Kukamiria, is a Tupi-Guarani language.",FALSE,,,,,,,,,,,,,,,,,,,,,https://www.wwf.org.ec/?389371/The-Kukama-Kukamiria-an-invisible-indigenous-people-that-emerges-revaluing-their-culture|PMID:33945560|PMID:29407757,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Kukama Kukamilla,,,,HANCESTRO:0874,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Kukama Kukamiria,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Individuals who self-identify or are reported by authors as belonging to the Kukama Kukamiria indigenous population in the Peruvian Amazon. Their language, also called Kukama-Kukamiria, is a Tupi-Guarani language.",,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0872,Bora,,Individuals who self-identify or are reported by authors as belonging to the Bora indigenous populations in Peru and Colombia.,FALSE,,,,,,,,,,,,,,,,,,,,,http://www.amazon-indians.org/page12.html|PMID:29765620|PMID:22911594,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0872,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Bora,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Individuals who self-identify or are reported by authors as belonging to the Bora indigenous populations in Peru and Colombia.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0876,Yine,,Individuals who self-identify or are reported by authors as belonging to the Yine indigenous population in the Peruvian Amazon.,FALSE,,,,,,,,,,,,,,,,,,,,,PMID:39360514|PMID:25123856,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0876,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Yine,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Individuals who self-identify or are reported by authors as belonging to the Yine indigenous population in the Peruvian Amazon.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0877,Moche Chimu,,Individuals who self-identify or are reported by authors as belonging to the Moche Chimu indigenous population in the Peruvian Amazon. The Chimu culture succeeded the Moche culture in the same region of Peru.,FALSE,,,,,,,,,,,,,,,,,,,,,https://www.ebsco.com/research-starters/social-sciences-and-humanities/chimu-culture,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0877,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Moche Chimu,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Individuals who self-identify or are reported by authors as belonging to the Moche Chimu indigenous population in the Peruvian Amazon. The Chimu culture succeeded the Moche culture in the same region of Peru.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000004,beef bottom round steak,,A steak cut from the beef bottom round.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000004,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef bottom round steak,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A steak cut from the beef bottom round.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001969,other library source,,"Other, unspecified, or unknown library source material.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI SRA: OTHER,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001969,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,other library source,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"Other, unspecified, or unknown library source material.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_68590,fidaxomicin,,An 18-membered macrolide that is a fermentation product obtained from the Actinomycete <em>Dactylosporangium aurantiacum</em>. A narrow spectrum antibiotic used for treatment of <em>Clostridium difficile</em>-related infections.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:68590,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,fidaxomicin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An 18-membered macrolide that is a fermentation product obtained from the Actinomycete <em>Dactylosporangium aurantiacum</em>. A narrow spectrum antibiotic used for treatment of <em>Clostridium difficile</em>-related infections.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001204,nml submitted specimen type,National Microbiology Laboratory submitted specimen type|NML submitted specimen type,A data field which describes the type of specimen submitted to the National Microbiology Laboratory (NML) for testing.,FALSE,,,,,,,PCDS:nml_submitted_specimen_type,,,,,,,"PCDS: This information is required for upload through the CNPHI LaSER system. Select the specimen type from the pick list provided. If sequence data is being submitted rather than a specimen for testing, select 'Not Applicable'.",,,,,,,,,,,,,,PCDS: swab,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,National Microbiology Laboratory submitted specimen type|NML submitted specimen type,National Microbiology Laboratory submitted specimen type slot|National Microbiology Laboratory submitted specimen type field|NML submitted specimen type slot,,,,GENEPIO:0001204,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,nml submitted specimen type,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the type of specimen submitted to the National Microbiology Laboratory (NML) for testing.,,PCDS: The type of specimen submitted to the National Microbiology Laboratory (NML) for testing.,,,,,,
http://purl.obolibrary.org/obo/DOID_9113,granuloma inguinale,,"A primary bacterial infectious disease that results_in infection located_in skin or located_in mucosa of genital tract, has_material_basis_in Klebsiella granulomatis, transmitted by sexual contact or transmitted_by contact with the open sores. The infection has_symptom painless genital ulcers.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:9113,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,granuloma inguinale,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A primary bacterial infectious disease that results_in infection located_in skin or located_in mucosa of genital tract, has_material_basis_in Klebsiella granulomatis, transmitted by sexual contact or transmitted_by contact with the open sores. The infection has_symptom painless genital ulcers.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00001131,poultry meat food product,,A food product made from domesticated bird meat.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00001131,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,poultry meat food product,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A food product made from domesticated bird meat.,,,,,,,,
http://purl.obolibrary.org/obo/IDO_0000569,asymptomatic host of infectious agent,,An organism that is host to an infectious agent and has no symptoms of the infectious disease associated with the infectious agent.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,IDO:0000569,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ido.owl,,,,,,,,,asymptomatic host of infectious agent,,,,,,,,,,,,,,,,,,,,,,,,,,,,Lindsay Cowell|Alexander Diehl|Albert Goldfain,,,,An organism that is host to an infectious agent and has no symptoms of the infectious disease associated with the infectious agent.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000924,plumbing drain,drainage channel|drain,"An artificial channel which transports unwanted water or waste liquids away from their source, either to a more useful area, a receptacle, or into sewers or stormwater mains as waste discharge to be released or processed.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,drainage channel|drain,,,,ENVO:01000924,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,plumbing drain,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An artificial channel which transports unwanted water or waste liquids away from their source, either to a more useful area, a receptacle, or into sewers or stormwater mains as waste discharge to be released or processed.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001292,phage type e-coli 0157 (PT),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001292,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,phage type e-coli 0157 (PT),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001944,CF-M method,,Cot-filtered moderately repetitive genomic DNA,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI SRA: CF-M,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001944,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CF-M method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Cot-filtered moderately repetitive genomic DNA,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002082,contact specification - specimen related organization,,"Contact information for an organization related to specimen collection, processing or storage.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002082,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,contact specification - specimen related organization,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"Contact information for an organization related to specimen collection, processing or storage.",,,"order:
GENEPIO:0002105 #  Specimen processing organization role
NCIT:C93874 # organization name
NCIT:C40974 # first name
NCIT:C40975 # last name
NCIT:C93582 # job title
NCIT:C42775 # email address
GENEPIO:0001756 # phone
NCIT:C25464 # Country
ENVO:00000005 # major administrative subdivision -> GAZ state/province/territory/region)
NCIT:C80234  # Municipality” (via GenEpiO -> GAZ cities)
NCIT:C25690 # Street Address",,,,,
http://purl.obolibrary.org/obo/HP_0025063,Scaphoid abdomen,,The anterior abdominal wall is sunken and presents a concave rather than a convex contour.,FALSE,,,,,,,,,,,,,,Scaphoid abdomen can be observed in diseases such as congenital diaphragmatic hernia (since the abdominal contents can be in the thorax).,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0025063,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Scaphoid abdomen,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The anterior abdominal wall is sunken and presents a concave rather than a convex contour.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100573,sequence amplification artifacts datum,,"A data item that describes sequence data containing errors generated during the polymerase chain reaction (PCR) amplification process during library generation (e.g. mutations, altered read distribution, amplicon dropouts).",FALSE,,,,,,,sequence amplification artifacts,,,,,,,,,,,,,,,,,,,,,,,,ready for release,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100573,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-1107-9135,2023-01-23T00:42:19.315Z,,,,,,,,,,,,,,,,,,,sequence amplification artifacts datum,,,,,,,,,,,,,,,,,,,,,,The PHA4GE QC Contextual Data Tags Specification: https://github.com/pha4ge/contextual-data-qc-tags,,,,,,,,,,"A data item that describes sequence data containing errors generated during the polymerase chain reaction (PCR) amplification process during library generation (e.g. mutations, altered read distribution, amplicon dropouts).",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_35281,onium betaine,,Neutral molecules having charge-separated forms with an onium atom which bears no hydrogen atoms and that is not adjacent to the anionic atom.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:35281,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,onium betaine,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Neutral molecules having charge-separated forms with an onium atom which bears no hydrogen atoms and that is not adjacent to the anionic atom.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C171083,Organism Characteristic,Organism Characteristic,A characteristic or attribute inherent or inherited to an organism.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Organism Characteristic,,,,NCIT:C171083,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Organism Characteristic,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A characteristic or attribute inherent or inherited to an organism.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001172,isolate organism role,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001172,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,isolate organism role,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490359,polyamide container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0359,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490359,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,polyamide container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://www.ebi.ac.uk/efo/EFO_0020989,bone marrow transplantation,BMT,A procedure to replace diseased bone marrow with transplanted healthy bone marrow cells.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PMID:35379913|NCIT:C15194,,,,,,,,,,,,,,,,,,,,,,,,,BMT,,,,efo:EFO_0020989,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,bone marrow transplantation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A procedure to replace diseased bone marrow with transplanted healthy bone marrow cells.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0001941,contig N50,,"N50 statistic computed for the contigs produced by the assembly process. A contig N50 is calculated by first ordering every contig by length from longest to shortest. Next, starting from the longest contig, the lengths of each contig are summed, until this running sum equals one-half of the total length of all contigs in the assembly. The contig N50 of the assembly is the length of the shortest contig in this list.",FALSE,,,,,,,,,,,,,,,,,,,,,http://www.nature.com/nature/journal.../409860a0.html,,,,,contig N50,,"Gigascience. 2012 Dec 27;1(1):18. doi: 10.1186/2047-217X-1-18.
PMID: 23587118. 

""Here, the contig and scaffold N50 of the YH genome were ~20.9 kbp and ~22 Mbp""",,,http://purl.obolibrary.org/obo/IAO_0000125,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0001941,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,,,,,,,contig N50,,,,,Assembly QC,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra|Damion Dooley|Alejandra Gonzalez-Beltran,,,,"N50 statistic computed for the contigs produced by the assembly process. A contig N50 is calculated by first ordering every contig by length from longest to shortest. Next, starting from the longest contig, the lengths of each contig are summed, until this running sum equals one-half of the total length of all contigs in the assembly. The contig N50 of the assembly is the length of the shortest contig in this list.",,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000673,event frequency rate,,A ratio in which the numerator represents an event frequency and the denominator represents an interval of time.,FALSE,,,,,,,,,,,,,,,,,,,,,SEVCO group,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000673,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,event frequency rate,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Brian S. Alper, Joanne Dehnbostel, Muhammad Afzal, Kenneth Wilkins, Harold Lehmann",,,,A ratio in which the numerator represents an event frequency and the denominator represents an interval of time.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102184,community triggered environmental monitoring,,"A sampling strategy in which environments are sampled in response to observations, complaints, or reports from the community regarding a change in environmental conditions.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102184,,,,,,,,,,,,,https://orcid.org/0000-0001-8008-8249,2026-04-13T19:52:38.515Z,,,,,,,,,,,,,,,,,,,community triggered environmental monitoring,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A sampling strategy in which environments are sampled in response to observations, complaints, or reports from the community regarding a change in environmental conditions.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000320,pork spareribs,,"Ribs derived from the pork belly.  Spareribs are the longer rib bones and intercostal meat located below the back ribs. They begin with the second rib and extend downward to the sternum and costal cartilage, spanning the length of the Rib cage.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000320,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pork spareribs,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Ribs derived from the pork belly.  Spareribs are the longer rib bones and intercostal meat located below the back ribs. They begin with the second rib and extend downward to the sternum and costal cartilage, spanning the length of the Rib cage.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03460300,acetic acid fermentation,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=H0300,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03460300,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,acetic acid fermentation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000117,plantation,,"An intentional planting of a crop, on a large scale, usually for uses other than cereal production or pasture. The term is currently most often used for plantings of trees and shrubs. The term tends also to be used for plantings maintained on economic bases other than that of subsistence farming.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Plantation|TGN:54041|FTT:68|FTT:45,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00000117,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,plantation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An intentional planting of a crop, on a large scale, usually for uses other than cereal production or pasture. The term is currently most often used for plantings of trees and shrubs. The term tends also to be used for plantings maintained on economic bases other than that of subsistence farming.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0015212,lateral structure,,Any structure that is placed on one side of the left-right axis of a bilaterian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0015212,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,lateral structure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any structure that is placed on one side of the left-right axis of a bilaterian.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002185,PulseNet Canada field,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002185,,,,,,,,,,,,,,2019-04-17T23:41:35Z,,,,,,,,,,,,,,,,,,,PulseNet Canada field,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100027,swab,,"A device which is a soft, absorbent material mounted on one or both ends of a stick.|A device which is a soft, absorbent material mounted on one or both ends of a stick.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",swab,,,,,requires discussion,http://purl.obolibrary.org/obo/OBI_0003451,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100027,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,swab|swab,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://orcid.org/0000-0002-8395-2570,,,,"A device which is a soft, absorbent material mounted on one or both ends of a stick.|A device which is a soft, absorbent material mounted on one or both ends of a stick.",,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000175,woodland biome,,"A woodland biome is a terrestrial biome which includes, across its entire spatial extent, woody plants spaced sufficiently far apart to allow light penetration to support communities of herbaceous plants or shrubs living closer to the woodland floor.",FALSE,,,,,,,,,,,,,,Preliminary definition.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01000175,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,woodland biome,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A woodland biome is a terrestrial biome which includes, across its entire spatial extent, woody plants spaced sufficiently far apart to allow light penetration to support communities of herbaceous plants or shrubs living closer to the woodland floor.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C49163,Surgical Procedure by Site or System,Surgical Procedure by Site or System,A classification of surgical procedures by the site or system of the surgery.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Surgical Procedure by Site or System,,,,NCIT:C49163,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Surgical Procedure by Site or System,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A classification of surgical procedures by the site or system of the surgery.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0018241,prime adult stage,,"A life cycle stage that starts at completion of development and growth of the sexually mature adult animal, and ends before senescence.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SscrDv:0000007|RnorDv:0000059|PtroDv:0000012|PpanDv:0000017|OcunDv:0000005|OariDv:0000007|OanaDv:0000005|MmusDv:0000136|MmulDv:0000022|MdomDv:0000007|HsapDv:0000226|GgorDv:0000007|GgalDv:0000077|FcatDv:0000005|EcabDv:0000005|CporDv:0000005|ChirDv:0000036|CfamDv:0000005|BtauDv:0000005|AcarDv:0000005,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0018241,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,prime adult stage,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A life cycle stage that starts at completion of development and growth of the sexually mature adult animal, and ends before senescence.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510231,food allergen labelling about carrot and products thereof,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0231,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510231,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food allergen labelling about carrot and products thereof,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_33608,hydrogen molecular entity,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:33608,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,hydrogen molecular entity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_24834,inorganic anion,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:24834,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,inorganic anion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GSSO_012492,non-cisgender gender modality,noncisgender gender modality,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://lgbta.fandom.com/wiki/Cisn%27t,,,,,,,,,,,,,,,,,,,,,,,,,noncisgender gender modality,,,,GSSO:012492,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gsso.owl,,,,,,,,,non-cisgender gender modality,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001458,raw sequence data processing method,raw sequence data processing method,"A data field which describes the method used for raw data processing such as removing barcodes, adapter trimming, filtering etc.",FALSE,,,,,,,PCDS:dehosting_method,,,,,,,PCDS: Provide the name and version number of the software used to remove host reads.,,,,,,,,,,,,,,PCDS: Nanostripper,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,raw sequence data processing method,raw sequence data processing method slot,,,,GENEPIO:0001458,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,raw sequence data processing method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A data field which describes the method used for raw data processing such as removing barcodes, adapter trimming, filtering etc.",,PCDS: The method used to remove host reads from the pathogen sequence.,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000111,forested area,,An area with a high density of trees. A small forest may be called a wood.,FALSE,,,,,,,,,,,,,,"The definitions of forest can vary greatly, and different classes will be needed to support the major categories. Tree cover alone is not enough to distinguish between forests and plantations. The international definition proposed by the 2010 FAO Forestry Resource Assessment: ""land spanning more than 0.5 ha with trees higher than 5 metres and canopy cover of more than 10 percent, or trees able to reach these thresholds in situ . It does not include land that is predominantly under agricultural or urban land use."" - FAO.  2010. Global forest resources assessment 2010, Main report, FAO Forestry Paper 163. Rome.",,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Forest|TGN:21645|TGN:21642|TGN:21641|SWEETRealm:Forest|LTER:2|Geonames:V.FRST|FTT:717|FTT:715|FTT:506|FTT:258|EcoLexicon:forest,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00000111,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,forested area,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An area with a high density of trees. A small forest may be called a wood.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100007,priority surveillance project strategy,,A targeted surveillance strategy which is considered important and/or urgent.,FALSE,,,,,,,Priority surveillance project,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100007,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,priority surveillance project strategy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A targeted surveillance strategy which is considered important and/or urgent.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000060,particulate environmental material,particulate matter,An environmental material which is composed primarily of particles.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,particulate matter,,,,,ENVO:01000060,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,envoPolar|envoAtmo,,,,,,,,particulate environmental material,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental material which is composed primarily of particles.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03460290,curing or aging 1 to 2 months,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=H0290,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03460290,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,curing or aging 1 to 2 months,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001825,Wikipedia,,Wikipedia is a free online encyclopedia that aims to allow anyone to edit articles.,FALSE,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Wikipedia,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001825,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,Wikipedia is a free online encyclopedia that aims to allow anyone to edit articles.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0636,Mandenka in Senegal (HGDP),Mandenka,A population made up of 20 samples from Mandenka individuals recruited in Senegal as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation African.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Mandenka,,,,HANCESTRO:0636,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Mandenka in Senegal (HGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 20 samples from Mandenka individuals recruited in Senegal as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation African.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0631,Asháninka,Asháninca,"Individuals who self-identify or are reported by authors as belonging to an indigenous people living in the rainforests of Peru and in the State of Acre, Brazil. Their ancestral lands are in the forests of Junín, Pasco, Huánuco and part of Ucayali in Peru.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Asháninca,,,,HANCESTRO:0631,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Asháninka,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Individuals who self-identify or are reported by authors as belonging to an indigenous people living in the rainforests of Peru and in the State of Acre, Brazil. Their ancestral lands are in the forests of Junín, Pasco, Huánuco and part of Ucayali in Peru.",,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0634,Bantu in South Africa (HGDP),Bantu South Africa,A population made up of 4 samples from Bantu individuals recruited in South Africa as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation African.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Bantu South Africa,,,,HANCESTRO:0634,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Bantu in South Africa (HGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 4 samples from Bantu individuals recruited in South Africa as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation African.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0635,Biaka in Central African Republic (HGDP),Biaka,A population made up of 24 samples from Biaka individuals recruited in Central African Republic as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation African.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Biaka,,,,HANCESTRO:0635,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Biaka in Central African Republic (HGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 24 samples from Biaka individuals recruited in Central African Republic as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation African.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0639,Yoruba in Nigeria (HGDP),Yoruba,A population made up of 18 samples from Yoruba individuals recruited in Nigeria as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation African.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Yoruba,,,,HANCESTRO:0639,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Yoruba in Nigeria (HGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 18 samples from Yoruba individuals recruited in Nigeria as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation African.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0630,Arhuaco,Ika|Ica,"Individuals who self-identify or are reported by authors as belonging to an Chibchan-speaking indigenous people of Colombia, descended from the Tairona culture, concentrated in northern Colombia in the Sierra Nevada de Santa Marta.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Ika|Ica,,,,HANCESTRO:0630,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Arhuaco,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Individuals who self-identify or are reported by authors as belonging to an Chibchan-speaking indigenous people of Colombia, descended from the Tairona culture, concentrated in northern Colombia in the Sierra Nevada de Santa Marta.",,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0637,Mbuti in Democratic Republic of Congo (HGDP),Mbuti,A population made up of 13 samples from Mbuti individuals recruited in Democratic Republic of Congo as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation African. Samples from this population were used in data collections  for HGDP Transcriptome.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Mbuti,,,,HANCESTRO:0637,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Mbuti in Democratic Republic of Congo (HGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 13 samples from Mbuti individuals recruited in Democratic Republic of Congo as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation African. Samples from this population were used in data collections  for HGDP Transcriptome.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0638,San in Namibia (HGDP),San,A population made up of 4 samples from San individuals recruited in Namibia as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation African.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,San,,,,HANCESTRO:0638,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,San in Namibia (HGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 4 samples from San individuals recruited in Namibia as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation African.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0633,Bantu in Kenya (HGDP),Bantu Kenya,A population made up of 10 samples from Bantu individuals recruited in Kenya as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation African.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Bantu Kenya,,,,HANCESTRO:0633,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Bantu in Kenya (HGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 10 samples from Bantu individuals recruited in Kenya as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation African.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100658,wet wipe,,A small moistened piece of plastic or cloth fabric.,FALSE,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Wet_wipe,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",wet wipe,,,,,requires discussion,http://purl.obolibrary.org/obo/OBI_0003452,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100658,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,wet wipe,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://orcid.org/0000-0002-8395-2570,,,,A small moistened piece of plastic or cloth fabric.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100534,prior mpox antiviral treatment,prior Monkeypox antiviral treatment,A data field which describes the absence or presence of antiviral treatment for a prior Monkeypox infection.,FALSE,,,,,,,PCDS:prior_mpox_antiviral_treatment,,,,,,,"PCDS: If known, provide information about whether the individual had a previous Mpox antiviral treatment. Select a value from the pick list.",,,,,,,,,,,,,,PCDS: Prior antiviral treatment,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,prior Monkeypox antiviral treatment,prior Monkeypox antiviral treatment slot,,,,GENEPIO:0100534,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,prior mpox antiviral treatment,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the absence or presence of antiviral treatment for a prior Monkeypox infection.,,PCDS: The absence or presence of antiviral treatment for a prior Mpox infection.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001885,surface area,,"Generic term allowing for different geometries.  Can encompass the infinite surface area of a plane, or some portion bounded by a circumference or polygon for example.",FALSE,,,,,,,,,,,,,,"Generic term allowing for different geometries.  Can encompass the infinite surface area of a plane, or some portion bounded by a circumference or polygon for example.",,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0001870,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0001996,,,,,,,,,,,,,,,,,GENEPIO:0001885,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,surface area,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03000385,chicken breast (bone-in),,A chicken breast that has the bone attached to it.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03000385,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,chicken breast (bone-in),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A chicken breast that has the bone attached to it.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_3091,Acinetobacter infectious disease,,An opportunistic bacterial infectious disease that has_material_basis_in Acinetobacter.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:3091,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,Acinetobacter infectious disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An opportunistic bacterial infectious disease that has_material_basis_in Acinetobacter.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0010020,fathom,ftm,"A maritime length unit which is equal to 6.08 feet, or 1.853184 metres",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ftm,,,,UO:0010020,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,fathom,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A maritime length unit which is equal to 6.08 feet, or 1.853184 metres",,,,,,,,
http://purl.obolibrary.org/obo/UO_0010028,pint,pt,"An imperial volume unit which is equivalent to 568.261,25 millilitres.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,pt,,,,UO:0010028,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,pint,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An imperial volume unit which is equivalent to 568.261,25 millilitres.",,,,,,,,
http://purl.obolibrary.org/obo/UO_0010021,cable,,"A maritime length unit which is equal to 608 feet, 100 fathoms, or 185.3184 metres",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:0010021,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,cable,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A maritime length unit which is equal to 608 feet, 100 fathoms, or 185.3184 metres",,,,,,,,
http://purl.obolibrary.org/obo/UO_0010027,gill,gi,"An imperial volume unit which is equivalent to 142.065,3125 millilitres.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,gi,,,,UO:0010027,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,gill,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An imperial volume unit which is equivalent to 142.065,3125 millilitres.",,,,,,,,
http://purl.obolibrary.org/obo/UO_0010029,quart,qt,"An imperial volume unit which is equivalent to 1,136.5225 millilitres, or two pints.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,qt,,,,UO:0010029,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,quart,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An imperial volume unit which is equivalent to 1,136.5225 millilitres, or two pints.",,,,,,,,
http://purl.obolibrary.org/obo/UO_0010026,fluid ounce,fl oz,"An imperial volume unit which is equivalent to 28.413,0625 millilitres.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,fl oz,,,,UO:0010026,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,fluid ounce,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An imperial volume unit which is equivalent to 28.413,0625 millilitres.",,,,,,,,
http://purl.obolibrary.org/obo/UO_0010022,nautical mile,,"A maritime length unit which is equal to 6,080 feet, 10 cables, or 1,853.184 metres",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:0010022,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,nautical mile,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A maritime length unit which is equal to 6,080 feet, 10 cables, or 1,853.184 metres",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C54640,Numeric Country Code,Numeric Country Code|ISO 3166-1 Numeric Country Code,"The numeric, three-digit country codes specified by the ISO 3166-1 country code standard.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Numeric Country Code|ISO 3166-1 Numeric Country Code,,,,NCIT:C54640,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Numeric Country Code,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The numeric, three-digit country codes specified by the ISO 3166-1 country code standard.",,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00009715,Tuvalu,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,INSDC:country:tuvalu,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00009715,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Tuvalu,http://purl.obolibrary.org/obo/GAZ_00006915,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00002896,"populated place, Panama",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00002896,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Panama",http://purl.obolibrary.org/obo/GAZ_00002892,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510188,adult human as food consumer,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0188,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510188,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,adult human as food consumer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001119,travel outside province/territory,,A travel destination which a given human has travelled to on a particular trip and is outside a given province/territory of interest.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001119,,,,,,,,,,,,,,2021-05-27T04:36:13Z,,,,,,,,,,,,,,,,,,,travel outside province/territory,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788,,,,A travel destination which a given human has travelled to on a particular trip and is outside a given province/territory of interest.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002066,obsolete: European Committe on Antimicrobial Susceptibility Testing (EUCAST),,"EUCAST is a standing committee jointly organized by ESCMID, ECDC and European national breakpoint committees; it deals with breakpoints and technical aspects of phenotypic in vitro antimicrobial susceptibility testing.",TRUE,,,,,,,,,,,,,,,,,,,,,http://www.eucast.org/,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,EUCAST,,,,,,GENEPIO:0002066,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: European Committe on Antimicrobial Susceptibility Testing (EUCAST),,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,http://purl.obolibrary.org/obo/ARO_3004368,,,"EUCAST is a standing committee jointly organized by ESCMID, ECDC and European national breakpoint committees; it deals with breakpoints and technical aspects of phenotypic in vitro antimicrobial susceptibility testing.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001023,treatment history datum,,A time measurement datum that pertains to a patient's medical treatment.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001023,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,treatment history datum,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A time measurement datum that pertains to a patient's medical treatment.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0000118,Phenotypic abnormality,Organ abnormality,A phenotypic abnormality.,FALSE,,,,,,,,,,,,,,This is the root of the phenotypic abnormality subontology of the HPO.,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/SYMP_0000462|UMLS:C4021819,,,,,,,,,,,,,,,,,,,,,,,,,Organ abnormality,,,,HP:0000118,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Phenotypic abnormality,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A phenotypic abnormality.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0000119,Abnormality of the genitourinary system,Urogenital anomalies|Urogenital abnormalities|Genitourinary tract malformation|Genitourinary tract anomalies|Genitourinary abnormality|Abnormality of the GU system,The presence of any abnormality of the genitourinary system.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4020895|UMLS:C0080276|UMLS:C0042063|SNOMEDCT_US:42030000|SNOMEDCT_US:287085006,,,,,,,,,,,,,,,,,,,,,,,HP:0008713|HP:0008704|HP:0008688|HP:0008658,,Urogenital anomalies|Urogenital abnormalities|Genitourinary tract malformation|Genitourinary tract anomalies|Genitourinary abnormality|Abnormality of the GU system,,,,HP:0000119,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormality of the genitourinary system,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The presence of any abnormality of the genitourinary system.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100584,taxonomic identification process details,taxonomic identification method details,A data field which describes the details of the process used to determine the taxonomic identification of an organism.,FALSE,,,,,,,PCDS:taxonomic_identification_process_details,,,,,,,PCDS: Briefly describe the taxonomic identififcation method details using free text.,,,,,,,,,,,,,,PCDS: Biolog instrument,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,taxonomic_identification_process_details|taxonomic identification process details,taxonomic identification process details slot,taxonomic identification method details,,,GENEPIO:0100584,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,taxonomic identification process details,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the details of the process used to determine the taxonomic identification of an organism.,,PCDS: The details of the process used to determine the taxonomic identification of an organism.,,,,,,
http://purl.obolibrary.org/obo/FOODON_00004485,lamb sub-primal cut,,A smaller cut of meat that is obtained from the larger primal cut of a lamb.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00004485,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lamb sub-primal cut,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A smaller cut of meat that is obtained from the larger primal cut of a lamb.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C26726,Infectious Disorder,infection|Unspecified Infection|Infectious Disorder|Infectious Diseases and Manifestations|Infectious Disease|Infectious|Infection|INFECTION|ID|Clinical Infection,"A disorder resulting from the presence and activity of a microbial, viral, fungal, or parasitic agent. It can be transmitted by direct or indirect contact.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,infection|Unspecified Infection|Infectious Disorder|Infectious Diseases and Manifestations|Infectious Disease|Infectious|Infection|INFECTION|ID|Clinical Infection,,,,NCIT:C26726,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Infectious Disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A disorder resulting from the presence and activity of a microbial, viral, fungal, or parasitic agent. It can be transmitted by direct or indirect contact.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100880,alkalinity measurement method,alkalinity measurement method,An environmental data field which describes the process used to measure alkalinity.,FALSE,,,,,,,PCDS:alkalinity_measurement_method,,,,,,,PCDS: Provide the name of the procedure or technology used to measure alkalinity.,,,,,,,,,,,,,,PCDS: Titration method,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,alkalinity measurement method,alkalinity measurement method slot,,,,GENEPIO:0100880,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,alkalinity measurement method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the process used to measure alkalinity.,,PCDS: The process used to measure alkalinity.,,,,,,
http://purl.obolibrary.org/obo/CHEBI_33308,carboxylic ester,,"An ester of a carboxylic acid, R<small><sup>1</small></sup>C(=O)OR<small><sup>2</small></sup>, where R<small><sup>1</small></sup> = H or organyl and R<small><sup>2</small></sup> = organyl.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:3408|CHEBI:23028|CHEBI:13204,,,,,,CHEBI:33308,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,carboxylic ester,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An ester of a carboxylic acid, R<small><sup>1</small></sup>C(=O)OR<small><sup>2</small></sup>, where R<small><sup>1</small></sup> = H or organyl and R<small><sup>2</small></sup> = organyl.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001154,treated water - ambient temperature,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001154,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,treated water - ambient temperature,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_25699,organic ion,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:25699,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,organic ion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000386,Bilen,,The Bilen are a Cushitic Eastern population with a population size of 0.2 million.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000386,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Bilen,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The Bilen are a Cushitic Eastern population with a population size of 0.2 million.,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000385,Beja,,A Cushitic Eastern population with a population size of 2.8 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000385,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Beja,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Cushitic Eastern population with a population size of 2.8 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000380,Birged,,"'The Birked live north and east of Dago and Bayko, between Gebel Harayz and Rizaykat and are much larger tribe then either.' from a: A History of the Arabs in the Sudan. Written by De H. A. MacMichael.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000380,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Birged,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"'The Birked live north and east of Dago and Bayko, between Gebel Harayz and Rizaykat and are much larger tribe then either.' from a: A History of the Arabs in the Sudan. Written by De H. A. MacMichael.",,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000388,Sidama,,A Cushitic Eastern population with a population size of >3 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000388,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Sidama,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Cushitic Eastern population with a population size of >3 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000383,Afar,,A Cushitic Eastern population with a population size of 6.3 million,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000383,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Afar,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Cushitic Eastern population with a population size of 6.3 million,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000389,Somali,,A Cushitic Eastern population with a population size of >20 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000389,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Somali,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Cushitic Eastern population with a population size of >20 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000382,Hill Nubian,,A Nubian Eastern population with a population size of 0.063 million,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000382,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Hill Nubian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Nubian Eastern population with a population size of 0.063 million,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000384,Agaw,,A Cushitic Eastern population with a population size of 1 million,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000384,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Agaw,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Cushitic Eastern population with a population size of 1 million,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000381,Dongolese,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000381,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Dongolese,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000387,Saho,,The Saho are a Cushitic Eastern population with a population size of 0.2 million.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000387,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Saho,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The Saho are a Cushitic Eastern population with a population size of 0.2 million.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100215,worksite exposure process,,A process occuring within or in the vicinity of an office that exposes the recipient organism to a material entity.,FALSE,,,,,,,Worksite,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100215,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,worksite exposure process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A process occuring within or in the vicinity of an office that exposes the recipient organism to a material entity.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0003462,facial bone,facial skeleton bone|facial bone|bone of facial skeleton,A bone that is part of a facial skeleton [Automatically generated definition].,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0015455|SCTID:181799005|NCIT:C63706|MESH:D005147|MA:0003159|MA:0001482|EMAPA:35924|EMAPA:19019,,,,,,,,,,,,,,,,,,,,,,,,,facial skeleton bone|facial bone|bone of facial skeleton,,,,UBERON:0003462,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,facial bone,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A bone that is part of a facial skeleton [Automatically generated definition].,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100059,subject age at time of specimen collection bin (100+),,An age group that stratifies the age of a case to be greater than or equal to 100 years old.,FALSE,,,,,,,100+,,,,,,,,,,,,,,,,,,,,,,,,ready for release,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100059,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,subject age at time of specimen collection bin (100+),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An age group that stratifies the age of a case to be greater than or equal to 100 years old.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001617,subject disease,,"A name of disease in a subject that is related to a given investigation, study and/or specimen.",FALSE,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0002077,"Controlled vocabulary. Human specimen source: https://bioportal.bioontology.org/ontologies/DOID
or https://www.ncbi.nlm.nih.gov/mesh/1000067",,,,,,,NIAID GSCID-BRC metadata working group,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001617,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,subject disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"A name of disease in a subject that is related to a given investigation, study and/or specimen.",,,,,,,,
http://purl.obolibrary.org/obo/OMIT_0007215,Glycoside Hydrolases,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OMIT:0007215,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/omit.owl,,,,,,,,,Glycoside Hydrolases,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/TRANS_0000001,direct transmission,,"Direct transmission is a transmission process that is the means during which the pathogen is transmitted immediately from a reservoir, source or host to another host.|Direct and essentially immediate transfer of infectious agents to a receptive portal of entry through which human or animal infection may take place. This may be by direct contact such as touching, kissing, biting, or sexual intercourse or by the direct projection (droplet spread) of droplet spray onto the conjunctiva or the mucous membranes of the eyes, nose, or mouth. It may also be by direct exposure of susceptible tissue to an agent in soil, compost, or decaying vegetable matter or by the bite of a rabid animal. Transplacental transmission is another form of direct transmission.",FALSE,,,,,,,,,,,,,,,,,,,,,https://www.ebi.ac.uk/ols/ontologies/trans,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,TRANS:0000001,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/trans.owl,,,,,,,,,direct transmission,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Direct transmission is a transmission process that is the means during which the pathogen is transmitted immediately from a reservoir, source or host to another host.|Direct and essentially immediate transfer of infectious agents to a receptive portal of entry through which human or animal infection may take place. This may be by direct contact such as touching, kissing, biting, or sexual intercourse or by the direct projection (droplet spread) of droplet spray onto the conjunctiva or the mucous membranes of the eyes, nose, or mouth. It may also be by direct exposure of susceptible tissue to an agent in soil, compost, or decaying vegetable matter or by the bite of a rabid animal. Transplacental transmission is another form of direct transmission.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100803,conductivity measurement unit,conductivity measurement unit,An environmental data field which describes the units of a measurement of conductivity.,FALSE,,,,,,,PCDS:conductivity_measurement_unit,,,,,,,PCDS: Provide the units of the measured conductivity.,,,,,,,,,,,,,,PCDS: microSiemen per centimeter (Î¼S/cm),,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,conductivity measurement unit,conductivity measurement unit slot,,,,GENEPIO:0100803,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,conductivity measurement unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the units of a measurement of conductivity.,,PCDS: The units of a measurement of conductivity.,,,,,,
http://purl.obolibrary.org/obo/NCIT_C70699,Biospecimen,specimen|sample (study)|sample|biospecimen|Specimen|Sample|Biospecimen|Biological Specimen|Biological Sample|BiologicSpecimen|Bio-Specimen|BIOSPECIMEN,"Any material sample taken from a biological entity for testing, diagnostic, propagation, treatment or research purposes, including a sample obtained from a living organism or taken from the biological object after halting of all its life functions. Biospecimen can contain one or more components including but not limited to cellular molecules, cells, tissues, organs, body fluids, embryos, and body excretory products.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,specimen|sample (study)|sample|biospecimen|Specimen|Sample|Biospecimen|Biological Specimen|Biological Sample|BiologicSpecimen|Bio-Specimen|BIOSPECIMEN,,,,NCIT:C70699,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Biospecimen,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Any material sample taken from a biological entity for testing, diagnostic, propagation, treatment or research purposes, including a sample obtained from a living organism or taken from the biological object after halting of all its life functions. Biospecimen can contain one or more components including but not limited to cellular molecules, cells, tissues, organs, body fluids, embryos, and body excretory products.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C35461,Clinical Course of Disease,Longitudinal Course|LONGCRSE|Clinical Course of Disease|Clinical Course,"A term that refers to the nature and/or clinical outcome of a disease (e.g., acute or chronic disease, aggressive or indolent disease, recurrent disease, etc.).",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Longitudinal Course|LONGCRSE|Clinical Course of Disease|Clinical Course,,,,NCIT:C35461,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Clinical Course of Disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A term that refers to the nature and/or clinical outcome of a disease (e.g., acute or chronic disease, aggressive or indolent disease, recurrent disease, etc.).",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490200,tube,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0200,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490200,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,tube,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_62733,aromatic amide,,An amide in which the amide linkage is bonded directly to an aromatic system.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:62733,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,aromatic amide,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An amide in which the amide linkage is bonded directly to an aromatic system.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_35275,S-glycosyl compound,,"A glycosyl compound arising formally from the elimination of water from a glycosidic hydroxy group and a S atom bound to a carbon atom, thus creating a C-S bond.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:33577|CHEBI:22048,,,,,,CHEBI:35275,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,S-glycosyl compound,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A glycosyl compound arising formally from the elimination of water from a glycosidic hydroxy group and a S atom bound to a carbon atom, thus creating a C-S bond.",,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000252,categorical variable,,a categorical variable  is a variable  which that can only assume a finite number  of value and cast observation in a small number of categories,FALSE,,,,,,,qualitative factor|nominal variable|discrete variable,,,,,,,,,,,,,,http://udel.edu/~mcdonald/statvartypes.html,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000252,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,categorical variable,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra|Orlaith Burke|Alejandra Gonzalez-Beltran,,,,a categorical variable  is a variable  which that can only assume a finite number  of value and cast observation in a small number of categories,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0589,Punjabi Sikh,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0589,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Punjabi Sikh,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0587,Martu Australian Aboriginal,,Includes individuals who either self-report or have been described by authors as Aboriginal Australian of Martu ancestry. The Martu Australian Aboriginal people are from the Western Desert region located across the Pilbara in Western Australia,FALSE,,,,,,,Martu Aboriginal Australian|Mardu Australian Aboriginal|Mardu Aboriginal Australian,,,,,,,,,,,,,,PMID:27070114,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0587,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Martu Australian Aboriginal,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Includes individuals who either self-report or have been described by authors as Aboriginal Australian of Martu ancestry. The Martu Australian Aboriginal people are from the Western Desert region located across the Pilbara in Western Australia,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0583,Taiwanese Han,Han Taiwanese,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Han Taiwanese,,,,HANCESTRO:0583,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Taiwanese Han,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0580,Malaysian Chinese,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0580,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Malaysian Chinese,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0586,Bashkir,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0586,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Bashkir,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0584,Sri Lankan Sinhalese,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0584,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Sri Lankan Sinhalese,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0588,Jewish Israeli,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0588,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Jewish Israeli,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0585,Tatar,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0585,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Tatar,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0582,Tibetan,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0582,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Tibetan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0581,Uygur,Uigur,,FALSE,,,,,,,Uygur Chinese,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Uigur,,,,HANCESTRO:0581,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Uygur,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000446,terrestrial biome,,A biome which is  primarily or completely situated on a landmass.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SPIRE:Terrestrial|LTER:798,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00000446,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,terrestrial biome,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A biome which is  primarily or completely situated on a landmass.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0030809,Abnormal tongue morphology,,Any structural anomaly of the tongue.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4280755,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0030809,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal tongue morphology,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any structural anomaly of the tongue.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0000436,needle,,"A needle is a sharp, hollow device used to penetrate tissue or soft material. When attached to a syringe. it allows delivery of a specific volume of liquid or gaseous mixture.",FALSE,,,,,,,,,,,,,,,,,,,,,OBI Instrument,,,,,needle,,Ovarian carcinoma presenting with axillary lymph node metastasis: A case diagnosed by fine-needle aspiration and brief review of the literature.  Diagn Cytopathol. 2008 Oct 16. PMID: 18925569,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0000436,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,needle,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra,,,,"A needle is a sharp, hollow device used to penetrate tissue or soft material. When attached to a syringe. it allows delivery of a specific volume of liquid or gaseous mixture.",,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00004373,"populated place, Ghana",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00004373,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Ghana",http://purl.obolibrary.org/obo/GAZ_00000908,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HP_0002633,Vasculitis,Inflammation of blood vessel|Angiitis,Inflammation of blood vessel.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0042384|SNOMEDCT_US:31996006,,,,,,,,,,,,,,,,,,,,,,,,,Inflammation of blood vessel|Angiitis,,,,HP:0002633,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Vasculitis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Inflammation of blood vessel.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0002637,Cerebral ischemia,Disruption of blood oxygen supply to brain|Cerebrovascular ischemia|Brain ischemia,Restriction of arterial blood supply to the brain associated with insufficient oxygenation to support the metabolic requirements of the tissue.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0917798|UMLS:C0007786|SNOMEDCT_US:389100007|SNOMEDCT_US:287731003,,,,,,,,,,,,,,,,,,,,,,,,,Disruption of blood oxygen supply to brain|Cerebrovascular ischemia|Brain ischemia,,,,HP:0002637,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Cerebral ischemia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Restriction of arterial blood supply to the brain associated with insufficient oxygenation to support the metabolic requirements of the tissue.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_75,lymphatic system disease,,An immune system disease that is located_in the lymphatic system.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:75,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,lymphatic system disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An immune system disease that is located_in the lymphatic system.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_754,bladder tuberculosis,,"An urogenital tuberculosis that is located_in urinary bladder, which results in fibrosis of bladder wall muscles.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:754,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,bladder tuberculosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An urogenital tuberculosis that is located_in urinary bladder, which results in fibrosis of bladder wall muscles.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_36816,oxime O-ether,,<em>O</em>-organyl oximes R<small><sub>2</sub></small>C=NOR' (R' ≠ H).,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:36816,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,oxime O-ether,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,<em>O</em>-organyl oximes R<small><sub>2</sub></small>C=NOR' (R' ≠ H).,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0002798,surgical gown,,A medical gown which is subjected to a sterilization process and which is intended to be worn by a medical professional during surgical procedures.,FALSE,,,,,,,,,,,,,,,,,,,,,OBI,,,,,surgical gown,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0002798,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,surgical gown,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://orcid.org/0000-0002-8844-9165,,,https://github.com/obi-ontology/obi/issues/1193,A medical gown which is subjected to a sterilization process and which is intended to be worn by a medical professional during surgical procedures.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0101028,water temperature units,water temperature units,An environmental data field which describes the units of measurement for water temperature.,FALSE,,,,,,,PCDS:water_temperature_units,,,,,,,PCDS: Provide the units of measurement for which the temperature was recorded.,,,,,,,,,,,,,,PCDS: degree Celsius (C) [UO:0000027],,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,water temperature units,water temperature units slot,,,,GENEPIO:0101028,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,water temperature units,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the units of measurement for water temperature.,,PCDS: The units of measurement for water temperature.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100234,prior infection,,An infection that occurred within a host prior to the current infection.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100234,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,prior infection,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An infection that occurred within a host prior to the current infection.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490163,"aluminum tray or pan, aluminum foil cover or wrapping",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0163,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490163,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"aluminum tray or pan, aluminum foil cover or wrapping",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020019,"animal breast (skinless, boneless)",,A skinless and boneless animal breast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020019,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"animal breast (skinless, boneless)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A skinless and boneless animal breast.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001595,assembly objective,,Submission of genome assembly (AGP data),FALSE,,,,,,,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/books/NBK54364/,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001595,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,assembly objective,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,Submission of genome assembly (AGP data),,,,assembly,,,,
http://purl.obolibrary.org/obo/GAZ_00004676,"populated place, Sri Lanka",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00004676,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Sri Lanka",http://purl.obolibrary.org/obo/GAZ_00003924,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C25160,City,City,A large and densely populated urban area; a city specified in an address.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,City,,,,NCIT:C25160,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,City,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A large and densely populated urban area; a city specified in an address.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020009,"piece of animal meat (boneless, raw)",,A raw piece of boneless animal meat.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020009,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"piece of animal meat (boneless, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw piece of boneless animal meat.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020697,piece of poultry meat (boneless),,A piece of boneless poultry meat.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020697,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of poultry meat (boneless),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A piece of boneless poultry meat.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001621,draft isolate identifier model,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001621,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,draft isolate identifier model,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001861,2D coordinate,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0001860,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001861,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,2D coordinate,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470102,food sterilization before filling,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0102,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470102,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food sterilization before filling,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100327,NCBI SRA library layout,library layout,"PCDS: Provide the library layout by selecting a value from the pick list. For Illumina instruments, select 'PAIRED'. For Oxford Nanopore instruments, select 'SINGLE'.",FALSE,,,,,,,PCDS:ncbi_sra_library_layout,,,,,,,"PCDS: Provide the library layout by selecting a value from the pick list. For Illumina instruments, select 'PAIRED'. For Oxford Nanopore instruments, select 'SINGLE'.",,,,,,,,,,,"These metadata fields are defined specifically for use with the NCBI SRA submission template. They are organizational constructs intended to support a particular template and underlying database and should not be reused to model metadata outside the intended context. Where possible, more general, template‑independent terms should be used instead.",,,PCDS: Paired,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,library layout,NCBI SRA library_layout,,,,GENEPIO:0100327,,,,,,,,,,,,,,2026-01-29T00:00:09.532Z,,,,,,,,,,,,,,,,,,,NCBI SRA library layout,,,,,,,,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/core/assets/sra/files/SRA_metadata_acc_example.xlsx,,,,,,,,,,,,PCDS: See NCBI SRA template for details.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100701,dataset attribute bundle,dataset tag|dataset data type|dataset component tag,A data item which indicates the presence of specific data attributes within a dataset.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A dataset may be annotated with the ""mollusc shell length tag"" to indicate the presence mollusc shell length data attributes such as a ""mollusc shell length"" field and ""mollusc shell length unit"" field.",,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,dataset tag|dataset data type|dataset component tag,,,,GENEPIO:0100701,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-05-18T19:08:34.869Z,,,,,,,,,,,,,,,,,,,dataset attribute bundle,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data item which indicates the presence of specific data attributes within a dataset.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002079,passage protocol,,"A passage protocol should detail the number of serial iterations that an isolate is grown in one environment, and the conditions of that environment.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002079,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,passage protocol,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"A passage protocol should detail the number of serial iterations that an isolate is grown in one environment, and the conditions of that environment.",,,"help:The passage protocol should include, when applicable, inoculum size, media type, temperature and duration of incubation.",,,,,
http://purl.obolibrary.org/obo/NCIT_C16212,Cancer Therapeutic Procedure,anticancer therapy|Malignant Neoplasm Treatment|Malignant Neoplasm Therapy|Cancer Treatment|Cancer Therapy|Cancer Therapeutic Procedure,Any intervention for management of a malignant neoplasm.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,anticancer therapy|Malignant Neoplasm Treatment|Malignant Neoplasm Therapy|Cancer Treatment|Cancer Therapy|Cancer Therapeutic Procedure,,,,NCIT:C16212,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Cancer Therapeutic Procedure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any intervention for management of a malignant neoplasm.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001013,spray-wading water,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001013,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,spray-wading water,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038632,pericardial lymph node,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:276807,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0038632,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,pericardial lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038634,para-aortic thoracic lymph node,station 6 lymph node|station 6 N2 lymph node|pre-aortic No. 6 lymph node|6 thoracic lymph node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:276820,,,,,,,,,,,,,,,,,,,,,,,,,station 6 lymph node|station 6 N2 lymph node|pre-aortic No. 6 lymph node|6 thoracic lymph node,,,,UBERON:0038634,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,para-aortic thoracic lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038633,aortopulmonary lymph node,station 5 lymph node|station 5 N2 lymph node|mediastinal lymph node station # 5|aortopulmonary window lymph node|5 thoracic lymph node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:276813,,,,,,,,,,,,,,,,,,,,,,,,,station 5 lymph node|station 5 N2 lymph node|mediastinal lymph node station # 5|aortopulmonary window lymph node|5 thoracic lymph node,,,,UBERON:0038633,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,aortopulmonary lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038638,lobar lymph node,station 12 lymph node|station 12 N1 lymph node|12R+L thoracic lymph node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:276849,,,,,,,,,,,,,,,,,,,,,,,,,station 12 lymph node|station 12 N1 lymph node|12R+L thoracic lymph node,,,,UBERON:0038638,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,lobar lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038635,interlobar lymph node,station 11 lymph node|station 11 N1 lymph node|11 thoracic lymph node|11 R+L thoracic,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:276828,,,,,,,,,,,,,,,,,,,,,,,,,station 11 lymph node|station 11 N1 lymph node|11 thoracic lymph node|11 R+L thoracic,,,,UBERON:0038635,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,interlobar lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100592,obsolete: specimen storage duration,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,Rehomed in OBIB,,,,,,,,,,,,,,,,,,,GENEPIO:0100592,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: specimen storage duration,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/OBIB_0002014,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000037,ditch,,"A small, human-made channel which has been dug for draining or irrigating the land.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Ditch|TGN:51256|SWEETRealm:Drain|Geonames:DTCH|FTT:403|FTT:400|FTT:129|EcoLexicon:drain,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00000037,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,ditch,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A small, human-made channel which has been dug for draining or irrigating the land.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0007499,epithelial sac,,An epithelial tube that is open at one end only.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,EHDAA2:0003115|AEO:0000115,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0007499,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,epithelial sac,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An epithelial tube that is open at one end only.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C25162,Code,code|Coding System|Code Name|Code|CODE,A symbol or combination of symbols which is assigned to the members of a collection.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,code|Coding System|Code Name|Code|CODE,,,,NCIT:C25162,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Code,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A symbol or combination of symbols which is assigned to the members of a collection.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102190,Magnetic bead capture,,A library selection process in which target molecules are selectively bound to magnetic beads and separated from a sample using a magnetic field.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102190,,,,,,,,,,,,,,2026-04-13T19:52:38.515Z,,,,,,,,,,,,,,,,,,,Magnetic bead capture,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A library selection process in which target molecules are selectively bound to magnetic beads and separated from a sample using a magnetic field.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001610,subject age,,An age measurement datum which is the age since birth of a given organism that is involved in an investigation or study at a given time.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001610,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,subject age,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,An age measurement datum which is the age since birth of a given organism that is involved in an investigation or study at a given time.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000258,lamb sirloin half,,"A lamb leg half that is derived from a whole leg. The anatomical location is the “Half” that comes from the Pelvic region of the Leg known as the Sirloin. The half includes the center section with muscles from the bottom, eye, tip, and top.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000258,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lamb sirloin half,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A lamb leg half that is derived from a whole leg. The anatomical location is the “Half” that comes from the Pelvic region of the Leg known as the Sirloin. The half includes the center section with muscles from the bottom, eye, tip, and top.",,,,,,,,
http://purl.obolibrary.org/obo/VT_0000001,vertebrate trait,,Any measurable or observable characteristic of a vertebrate organism.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,VT:0000001,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/vt.owl,,,,,,,,,vertebrate trait,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any measurable or observable characteristic of a vertebrate organism.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000084,beef top blade (raw),,A raw beef top blade cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000084,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef top blade (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef top blade cut.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470113,sterilization by irradiation,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0113,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470113,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,sterilization by irradiation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_33245,organic fundamental parent,,"An organic fundamental parent is a structure used as a basis for substitutive names in organic nomenclature, containing, in addition to one or more hydrogen atoms, a single atom of an element, a number of atoms (alike or different) linked together to form an unbranched chain, a monocyclic or polycyclic ring system, or a ring assembly or ring/chain system.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:33245,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,organic fundamental parent,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An organic fundamental parent is a structure used as a basis for substitutive names in organic nomenclature, containing, in addition to one or more hydrogen atoms, a single atom of an element, a number of atoms (alike or different) linked together to form an unbranched chain, a monocyclic or polycyclic ring system, or a ring assembly or ring/chain system.",,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000104,Fulani,,"A Northern African, Central African, Western African, Eastern African population with a population size of 25 millions",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000104,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Fulani,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A Northern African, Central African, Western African, Eastern African population with a population size of 25 millions",,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000103,Tsonga,,A Bantu Southern population with a population size of 6 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000103,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Tsonga,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Bantu Southern population with a population size of 6 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000107,Zaghawa,,"A Nilotic Central, Nilotic Eastern, Northern African population with a population size of 0.4 million",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000107,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Zaghawa,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A Nilotic Central, Nilotic Eastern, Northern African population with a population size of 0.4 million",,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000109,Tugen,,A Kalenjin population with a population size of 197556,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000109,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Tugen,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Kalenjin population with a population size of 197556,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000105,Yoruba,,A Western African population with a population size of 45 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000105,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Yoruba,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Western African population with a population size of 45 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000102,Lunda,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000102,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Lunda,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HP_0000502,Abnormal conjunctiva morphology,,An abnormality of the conjunctiva.,FALSE,,,,,,,,,,,,,,"The conjunctiva is a thin, sparsely vascularized transparent membrane that covers and protects the sclera (the bulbar conjunctiva), and forms the inner lining of the eyelids (the tarsal conjunctiva).",,,,,,,,,,,,,,,,,,UMLS:C4025847,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0000502,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,http://purl.oboInOwllibrary.org/oboInOwl/hp#hposlim_core,,,,,,,,Abnormal conjunctiva morphology,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An abnormality of the conjunctiva.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0000508,Ptosis,Palpebral ptosis|Eyelid ptosis|Drooping upper eyelid|Blepharoptosis,"The upper eyelid margin is positioned 3 mm or more lower than usual and covers the superior portion of the iris (objective); or, the upper lid margin obscures at least part of the pupil (subjective).",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0005745|SNOMEDCT_US:11934000,,,,,,,,,,,,,,,,,,,,,,,,,Palpebral ptosis|Eyelid ptosis|Drooping upper eyelid|Blepharoptosis,,,,HP:0000508,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,http://purl.oboInOwllibrary.org/oboInOwl/hp#hposlim_core,,,,,,,,Ptosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The upper eyelid margin is positioned 3 mm or more lower than usual and covers the superior portion of the iris (objective); or, the upper lid margin obscures at least part of the pupil (subjective).",,,,,,,,
http://purl.obolibrary.org/obo/HP_0000504,Abnormality of vision,Vision issue|Abnormality of vision|Abnormality of sight,Abnormality of eyesight (visual perception).,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4025846,,,,,,,,,,,,,,,,,,,,,,,,,Vision issue|Abnormality of vision|Abnormality of sight,,,,HP:0000504,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,http://purl.oboInOwllibrary.org/oboInOwl/hp#hposlim_core,,,,,,,,Abnormality of vision,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Abnormality of eyesight (visual perception).,,,,,,,,
http://purl.obolibrary.org/obo/HP_0000509,Conjunctivitis,Pink eye,Inflammation of the conjunctiva.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C1864156|UMLS:C0009763|SNOMEDCT_US:9826008,,,,,,,,,,,,,,,,,,,,,,,,,Pink eye,,,,HP:0000509,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,http://purl.oboInOwllibrary.org/oboInOwl/hp#hposlim_core,,,,,,,,Conjunctivitis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Inflammation of the conjunctiva.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_3745,clindamycin,,"A carbohydrate-containing antibiotic that is the  semisynthetic derivative of lincomycin, a natural antibiotic.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:47331,,,,,,CHEBI:3745,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,clindamycin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A carbohydrate-containing antibiotic that is the  semisynthetic derivative of lincomycin, a natural antibiotic.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_3749,clofazimine,,"3-Isopropylimino-3,5-dihydro-phenazine in which the hydrogen at position 5 is substituted substituted by a 4-chlorophenyl group, and that at position 2 is substituted by a (4-chlorophenyl)amino group. A dark red crystalline solid, clofazimine is an antimycobacterial and is one of the main drugs used for the treatment of  multi-bacillary leprosy. However, it can cause red/brown discolouration of the skin, so other treatments are often preferred in light-skinned patients.",FALSE,,,,,,,Cfz,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:355347,,,,,,CHEBI:3749,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,clofazimine,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"3-Isopropylimino-3,5-dihydro-phenazine in which the hydrogen at position 5 is substituted substituted by a 4-chlorophenyl group, and that at position 2 is substituted by a (4-chlorophenyl)amino group. A dark red crystalline solid, clofazimine is an antimycobacterial and is one of the main drugs used for the treatment of  multi-bacillary leprosy. However, it can cause red/brown discolouration of the skin, so other treatments are often preferred in light-skinned patients.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0003657,limb joint,skeletal limb joint|joint of limb skeletal system|joint of limb,Any joint that is part of a (free) limb.,FALSE,,,,,,,,,,,,,,"Most limb joints are synovial, but a few such as the tibiofibular joints are syndesmoses",,,,,,,,,,,,,,,,,,galen:LimbJoint|SCTID:312683002|MA:0000691|FMA:321558|EMAPA:36501,,,,,,,,,,,,,,,,,,,,,,,,,skeletal limb joint|joint of limb skeletal system|joint of limb,,,,UBERON:0003657,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,limb joint,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any joint that is part of a (free) limb.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100723,serotype identification tag,serotype data type,A microbiological characterization data tag which indicates the presence of microbiological identification data derived using serotype identification.,FALSE,,,,,,,serotype,,,,,,,"Example Guidance: Use this tag to indicate additional data is available that provides identification information from serotyping, a subtyping test based on differences in microbial surfaces.",,,,,,,,,,,"https://www.cdc.gov/salmonella/reportspubs/salmonella-atlas/serotyping-importance.html used as a partial source for the ""Example Guidance"".",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,serotype data type,,,,GENEPIO:0100723,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-05-18T19:08:34.869Z,,,,,,,,,,,,,,,,,,,serotype identification tag,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A microbiological characterization data tag which indicates the presence of microbiological identification data derived using serotype identification.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000009,national geopolitical entity,independent sovereign nation|independent political entity|independent nation,A political association with effective dominion over a geographic area.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Nation|TGN:81102|TGN:81011|TGN:81010|TGN:80006|SWEETRealm:State|SWEETRealm:Country|FTT:571|FTT:567|FTT:566|FTT:424,,,,,,,,,,,,,,,,,,,,,,,,,nation|http://purl.obolibrary.org/obo/NCIT_C25464,independent sovereign nation|independent political entity|independent nation,,,ENVO:00000009,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,national geopolitical entity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A political association with effective dominion over a geographic area.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02010090,piece of animal organ (raw),,A raw piece of an animal organ.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02010090,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of animal organ (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw piece of an animal organ.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000330,giga base pair,gigabasepair|Gb,A unit equal to one billion base pairs.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,gigabasepair|Gb,,,,UO:0000330,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,giga base pair,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A unit equal to one billion base pairs.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01001275,solid layer,,"A layer which is primarily composed of some solid material, allowing for non-solid parts such as interstitial pockets of gas or liquid.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01001275,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,solid layer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A layer which is primarily composed of some solid material, allowing for non-solid parts such as interstitial pockets of gas or liquid.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00004477,beef roast,,A retail cut of meat from a beef that is of a size for slicing into more than one portion and is suitable for roasting.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00004477,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef roast,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A retail cut of meat from a beef that is of a size for slicing into more than one portion and is suitable for roasting.,,,,,,,,
http://purl.obolibrary.org/obo/IDO_0000616,infectious agent colony,,A colony whose members are infectious agents.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,IDO:0000616,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ido.owl,,,,,,,,,infectious agent colony,,,,,,,,,,,,,,,,,,,,,,,,,,,,Lindsay Cowell|Alexander Diehl|Albert Goldfain,,,,A colony whose members are infectious agents.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_139588,alpha-hydroxy ketone,,A ketone containing a hydroxy group on the α-carbon relative to the C=O group.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:139588,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,alpha-hydroxy ketone,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A ketone containing a hydroxy group on the α-carbon relative to the C=O group.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038878,lateral diaphragmatic lymph node,lateral diaphragmatic node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:5935,,,,,,,,,,,,,,,,,,,,,,,,,lateral diaphragmatic node,,,,UBERON:0038878,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,lateral diaphragmatic lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038871,supratrochlear lymph node,supratrochlear node|supra-epicondylar lymph node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:44316,,,,,,,,,,,,,,,,,,,,,,,,,supratrochlear node|supra-epicondylar lymph node,,,,UBERON:0038871,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,supratrochlear lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038870,cubital lymph node,cubital node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:44315,,,,,,,,,,,,,,,,,,,,,,,,,cubital node,,,,UBERON:0038870,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,cubital lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038879,anterior diaphragmatic lymph node,anterior diaphragmatic node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:5936,,,,,,,,,,,,,,,,,,,,,,,,,anterior diaphragmatic node,,,,UBERON:0038879,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,anterior diaphragmatic lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001475,depth of coverage threshold,depth of coverage threshold,A data field which describes the threshold used as a cut-off for the depth of coverage.,FALSE,,,,,,,PCDS:depth_of_coverage_threshold,,,,,,,PCDS: Provide the threshold fold coverage.,,,,,,,,,,,,,,PCDS: 100,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,depth of coverage threshold,depth of coverage threshold slot,,,,GENEPIO:0001475,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,depth of coverage threshold,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the threshold used as a cut-off for the depth of coverage.,,PCDS: The threshold used as a cut-off for the depth of coverage.,,,,,,
http://purl.obolibrary.org/obo/ECTO_3000005,exposure to humans,Homo sapiens exposure,A history of exposure to Homo sapiens.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Homo sapiens exposure,,,,ECTO:3000005,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ecto.owl,,,,,,,,,exposure to humans,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A history of exposure to Homo sapiens.,,,,,,,,
http://purl.obolibrary.org/obo/ECTO_3000000,exposure to organism,root exposure,A history of exposure to root.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,root exposure,,,,ECTO:3000000,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ecto.owl,,,,,,,,,exposure to organism,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A history of exposure to root.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001467,pregnancy history record,,Needs to cover the various pregnancy events,FALSE,,,,,,,,,,,,,,Needs to cover the various pregnancy events,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001467,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,pregnancy history record,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_2755,Mycobacterium avium complex disease,,"A primary bacterial infectious disease that results_in infection, has_material_basis_in Mycobacterium avium complex (MAC), which is transmitted_by inhalation or transmitted_by ingestion of via the respiratory or gastrointestinal tract respectively. The bacteria cause disseminated infection in HIV infected people, while pulmonary disease in immunocompetent persons.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:2755,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,Mycobacterium avium complex disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A primary bacterial infectious disease that results_in infection, has_material_basis_in Mycobacterium avium complex (MAC), which is transmitted_by inhalation or transmitted_by ingestion of via the respiratory or gastrointestinal tract respectively. The bacteria cause disseminated infection in HIV infected people, while pulmonary disease in immunocompetent persons.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03311787,"chicken breast (sliced, ready-to-eat)",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://bioregistry.io/reference/siren:F11787,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03311787,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"chicken breast (sliced, ready-to-eat)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0101019,negative control specimen role,,"A control specimen that is expected to yield a negative result, to establish a reference baseline for an experiment",FALSE,,,,,,,negative control specimen|negative control sample,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Scientific_control,,,,,,,,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0101019,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-11-20T16:24:25Z,,,,,,,,,,,,,,,,,,,negative control specimen role,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A control specimen that is expected to yield a negative result, to establish a reference baseline for an experiment",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001852,undetermined health status - awaiting assessment,,Patient is awaiting physician and/or assessment.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,Very similar to 'datum status' 'in process' status.,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,http://purl.obolibrary.org/obo/GENEPIO_0001837,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001852,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,undetermined health status - awaiting assessment,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,Patient is awaiting physician and/or assessment.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001116,TB lineage 7 - Ethiopia,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001116,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,TB lineage 7 - Ethiopia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_5353,colonic disease,,A intestinal disease located in the colon.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:5353,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,colonic disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A intestinal disease located in the colon.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100013,domestic travel surveillance strategy,,A travel-associated surveillance strategy in which individuals are selected if they have an intranational travel history within a specified number of days before onset of symptoms.,FALSE,,,,,,,Domestic travel surveillance,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100013,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,domestic travel surveillance strategy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A travel-associated surveillance strategy in which individuals are selected if they have an intranational travel history within a specified number of days before onset of symptoms.,,,,,,,,
http://purl.obolibrary.org/obo/ARO_3004391,diffusion method,,Microbial species are inoculated in a growth medium onto which antimicrobial agents are transferred by diffusion.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ARO:3004391,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/aro.owl,,,,,,,,,diffusion method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Microbial species are inoculated in a growth medium onto which antimicrobial agents are transferred by diffusion.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100818,fecal coliform count value,fecal coliform count value|faecal coliform count value,An environmental data field which describes the numerical value of a measurement of fecal coliforms within a sample.,FALSE,,,,,,,PCDS:fecal_coliform_count_value,,,,,,,PCDS: Provide the numerical value of the measured fecal coliforms.,,,,,,,,,,,,,,PCDS: 3,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,fecal coliform count value|faecal coliform count value,fecal coliform count value slot|faecal coliform count value slot,,,,GENEPIO:0100818,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,fecal coliform count value,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the numerical value of a measurement of fecal coliforms within a sample.,,PCDS: The numerical value of a measurement of fecal coliforms within a sample.,,,,,,
http://purl.obolibrary.org/obo/CHEBI_33694,biomacromolecule,,A macromolecule formed by a living organism.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:33694,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,biomacromolecule,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A macromolecule formed by a living organism.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530111,fast food outlet preparation process,,The process of preparing and serving food in a fast food outlet.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0111,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530111,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,fast food outlet preparation process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The process of preparing and serving food in a fast food outlet.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_6104,kanamycin,,"Kanamycin is a naturally occurring antibiotic complex from <em>Streptomyces kanamyceticus</em> that consists of several components: kanamycin A, the major component (also usually designated as kanamycin), and kanamycins B, C, D and X the minor components.",FALSE,,,,,,,Kan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:6104,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,kanamycin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Kanamycin is a naturally occurring antibiotic complex from <em>Streptomyces kanamyceticus</em> that consists of several components: kanamycin A, the major component (also usually designated as kanamycin), and kanamycins B, C, D and X the minor components.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_55373,isoxazoles,,Oxazoles in which the N and O atoms are adjacent.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:46813,,,,,,CHEBI:55373,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,isoxazoles,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Oxazoles in which the N and O atoms are adjacent.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100787,oxygen reduction potential orp measurement method,oxygen reduction potential (ORP) measurement method,An environmental data field which describes the method used to measure oxygen reduction potential (ORP).,FALSE,,,,,,,PCDS:oxygen_reduction_potential_orp_measurement_method,,,,,,,PCDS: Provide the name of the procedure or technology used to measure oxygen reduction potential.,,,,,,,,,,,,,,PCDS: ORP sensor,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,oxygen reduction potential (ORP) measurement method,oxygen reduction potential (ORP) measurement method slot,,,,GENEPIO:0100787,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,oxygen reduction potential orp measurement method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the method used to measure oxygen reduction potential (ORP).,,PCDS: The method used to measure oxygen reduction potential (ORP).,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100030,vacuum aspiration,,An aspiration process which uses a vacuum source to remove a sample.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100030,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,vacuum aspiration,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An aspiration process which uses a vacuum source to remove a sample.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_03501219,window,windowpane|sash window|sash|pane|casement window|casement,"A manufactured product which is composed of one or more glass or other transparent or semi-transparent materials set inside a frame, and installed in wall, door, roof or vehicle surfaces to allow the passage of light, and sometimes air.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,windowpane|sash window|sash|pane|casement window|casement,,,,ENVO:03501219,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,window,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A manufactured product which is composed of one or more glass or other transparent or semi-transparent materials set inside a frame, and installed in wall, door, roof or vehicle surfaces to allow the passage of light, and sometimes air.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000108,beef cross-rib roast (raw),,A raw beef cross-rib roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000108,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef cross-rib roast (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef cross-rib roast.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03430105,"whole, shape achieved by forming, thickness 1.5-7 cm.",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=E0105,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03430105,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"whole, shape achieved by forming, thickness 1.5-7 cm.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000073,beef shoulder steak,,A steak cut across the grain from the shoulder clod arm roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000073,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef shoulder steak,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A steak cut across the grain from the shoulder clod arm roast.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0005291,embryonic tissue,portion of embryonic tissue,A portion of tissue that is part of an embryo.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CALOHA:TS-2100,,,,,,,,,,,,,,,,,,,,,,,,,portion of embryonic tissue,,,,UBERON:0005291,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,embryonic tissue,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A portion of tissue that is part of an embryo.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00003728,"populated place, Indonesia",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00003728,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Indonesia",http://purl.obolibrary.org/obo/GAZ_00003727,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00003724,"populated place, Rwanda",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00003724,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Rwanda",http://purl.obolibrary.org/obo/GAZ_00001087,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0005911,endo-epithelium,endoepithelium|endoderm-derived epithelium,"Epithelium that derives from the endoderm. Examples: urothelium, transitional epithelium of ureter, epithelium of prostatic gland.[FMA].",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:69065,,,,,,,,,,,,,,,,,,,,,,,,,endoepithelium|endoderm-derived epithelium,,,,UBERON:0005911,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,endo-epithelium,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Epithelium that derives from the endoderm. Examples: urothelium, transitional epithelium of ureter, epithelium of prostatic gland.[FMA].",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0005913,zone of bone organ,bone organ zone,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:10483,,,,,,,,,,,,,,,,,,,,,,,,,bone organ zone,,,,UBERON:0005913,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,zone of bone organ,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ARO_3004413,cross streak method,,"This method is commonly used to study the antagonism between microorganisms. The microbial strain of interest is seeded by a single streak in the center of the agar plate. After incubation, the plate is seeded with the second microorganism by single streak perpendicular to the central streak.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ARO:3004413,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/aro.owl,,,,,,,,,cross streak method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"This method is commonly used to study the antagonism between microorganisms. The microbial strain of interest is seeded by a single streak in the center of the agar plate. After incubation, the plate is seeded with the second microorganism by single streak perpendicular to the central streak.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_74,hematopoietic system disease,,A disease of anatomical entity that has_material_basis_in hematopoietic cells.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:74,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,hematopoietic system disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A disease of anatomical entity that has_material_basis_in hematopoietic cells.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000060,beef country-style rib,,"A cut made by splitting a chuck eye roll in half lengthwise, resulting in two boneless, country-style ribs.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000060,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef country-style rib,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A cut made by splitting a chuck eye roll in half lengthwise, resulting in two boneless, country-style ribs.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100591,International Monkeypox specification,,A data specification established for Monkeypox pathogen genomics contextual data (metadata) harmonization and curation across international data providers.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100591,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788,2022-12-09T20:18:38.91Z,,,,,,,,,,,,,,,,,,,International Monkeypox specification,,,,,,,,,,,,,,,,,,,,,,https://github.com/cidgoh/pathogen-genomics-package,,,,,,,,,,A data specification established for Monkeypox pathogen genomics contextual data (metadata) harmonization and curation across international data providers.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000300,pork sirloin chop,,"A pork chop that is derived from the whole loin.  The Sirloin is the last 5 to 7 inches of the posterior end of the Loin. Sirloin Chop comes after but is adjacent to, the posterior end of the center-cut loin.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000300,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pork sirloin chop,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A pork chop that is derived from the whole loin.  The Sirloin is the last 5 to 7 inches of the posterior end of the Loin. Sirloin Chop comes after but is adjacent to, the posterior end of the center-cut loin.",,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01001780,desert ecosystem,,"An ecosystem in which the composition, structure, and function of resident ecological assemblages are primarily determined by a desert.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01001780,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,desert ecosystem,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An ecosystem in which the composition, structure, and function of resident ecological assemblages are primarily determined by a desert.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001187,antimicrobial resistance test drug,,This is a collection of drugs used to test antimicrobial resistance.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"This is a class of chemicals by use.  They are organized more indirectly in CHEBI via 'has role' some 'antimicrobial agent'.

Note: NCBI provides special requirements for antibiotic test-selection for BETA-LACTAMASE, see https://www.ncbi.nlm.nih.gov/biosample/docs/beta-lactamase/

Damion Dooley note: Used http://cts.fiehnlab.ucdavis.edu/conversion/batchConvert to convert antibiotic name to CHEBI entries. 60% match, some matches off, had to curate hits manually.

Note that this is a longer list of antibiotics that we will need to incorporate, perhaps through ARO:
https://www.ncbi.nlm.nih.gov/biosample/docs/antibiogram/?format=txt",,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/CHEBI_33281,,,,,,,,,,,,GENEPIO:0001187,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,antimicrobial resistance test drug,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,This is a collection of drugs used to test antimicrobial resistance.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_3393,carbenicillin,,A penicillin antibiotic having a 6β-2-carboxy-2-phenylacetamido side-chain.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:3393,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,carbenicillin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A penicillin antibiotic having a 6β-2-carboxy-2-phenylacetamido side-chain.,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0600008,cytokine release syndrome,cytokine-associated toxicity|cytokine storm|CRS,"A syndrome that occurs after therapeutic infusion of antibodies into the blood and is characterized by nausea, headache, tachycardia, hypotension, rash, and shortness of breath. It is caused by the release of cytokines from the cells that are targeted by the antibodies. Most patients experience a mild to moderate reaction; however, the reaction may be severe and life-threatening.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0948245|NCIT:C78251|MESH:D000080424|MEDGEN:215297|ICD10CM:D89.83,,,,,,,,,,,,,,,,,,,,,,,,,cytokine-associated toxicity|cytokine storm|CRS,,,,MONDO:0600008,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,,,,,,,,,cytokine release syndrome,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A syndrome that occurs after therapeutic infusion of antibodies into the blood and is characterized by nausea, headache, tachycardia, hypotension, rash, and shortness of breath. It is caused by the release of cytokines from the cells that are targeted by the antibodies. Most patients experience a mild to moderate reaction; however, the reaction may be severe and life-threatening.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490115,ceramic or earthenware crock or jar,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0115,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490115,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,ceramic or earthenware crock or jar,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C161352,Nitrate Measurement,Nitric Acid Measurement|Nitric Acid|Nitrate Measurement|Nitrate|NITRATE,The determination of the amount of nitrate present in a sample.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Nitric Acid Measurement|Nitric Acid|Nitrate Measurement|Nitrate|NITRATE,,,,NCIT:C161352,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Nitrate Measurement,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The determination of the amount of nitrate present in a sample.,,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000681,standardized incidence ratio,,An incidence rate ratio in which the numerator is the incidence rate in a group and the denominator is the incidence rate for a reference population.,FALSE,,,,,,,SIR,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000681,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,standardized incidence ratio,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Brian S. Alper, Kenneth Wilkins, Joanne Dehnbostel, Muhammad Afzal",,,,An incidence rate ratio in which the numerator is the incidence rate in a group and the denominator is the incidence rate for a reference population.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00002419,food evaporation process,,A food evaporation process is the process of removing water from a food.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00002419,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food evaporation process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A food evaporation process is the process of removing water from a food.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000007,"beef bottom round steak (boneless, raw)",,A raw and boneless beef bottom round steak.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000007,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"beef bottom round steak (boneless, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw and boneless beef bottom round steak.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490174,wood container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0174,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490174,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,wood container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100314,vaccination date dose number,vaccination_dose_4_vaccination_date|vaccination_dose_3_vaccination_date|vaccination_dose_2_vaccination_date|vaccination_dose_1_vaccination_date|vaccination_date_dose_2|vaccination_date_dose_1|vaccination dose two vaccination date|vaccination dose three vaccination date|vaccination dose one vaccination date|vaccination dose four vaccination date|vaccination dose 4 vaccination date|vaccination dose 3 vaccination date|vaccination dose 2 vaccination date|vaccination dose 1 vaccination date|GENEPIO:0100320|GENEPIO:0100318|GENEPIO:0100316,A host data field which describes the date the first dose of a vaccine was administered.,FALSE,,,,,,,PCDS:vaccination_date_dose_*,,,,,,,PCDS: Provide the date the first dose of Measles vaccine was administered. The date should be provided in ISO 8601 standard format 'YYYY-MM-DD'.,,,,,,,,,,,,,,PCDS: 2021-03-01,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,vaccination_dose_4_vaccination_date|vaccination_dose_3_vaccination_date|vaccination_dose_2_vaccination_date|vaccination_dose_1_vaccination_date|vaccination_date_dose_2|vaccination_date_dose_1|vaccination dose two vaccination date|vaccination dose three vaccination date|vaccination dose one vaccination date|vaccination dose four vaccination date|vaccination dose 4 vaccination date|vaccination dose 3 vaccination date|vaccination dose 2 vaccination date|vaccination dose 1 vaccination date|GENEPIO:0100320|GENEPIO:0100318|GENEPIO:0100316,,,,GENEPIO:0100314,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,vaccination date dose number,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A host data field which describes the date the first dose of a vaccine was administered.,,PCDS: The date the first dose of a vaccine was administered.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001659,case identifier,,A case ID is a unique identifier associated with a particular episode of care for an individual or animal.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001659,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,case identifier,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A case ID is a unique identifier associated with a particular episode of care for an individual or animal.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00000013,continent,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00000013,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,continent,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00003671,Greater London Region,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00003671,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Greater London Region,http://purl.obolibrary.org/obo/GAZ_00002641,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00003670,South West Region,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00003670,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,South West Region,http://purl.obolibrary.org/obo/GAZ_00002641,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100254,work role,,A role inhering in a person that is realized when the bearer performs labor for a living.,FALSE,,,,,,,Work,,,,,,,,,,,,,,https://en.wiktionary.org/wiki/volunteer,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100254,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,work role,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A role inhering in a person that is realized when the bearer performs labor for a living.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0010927,Abnormal blood inorganic cation concentration,Abnormality of divalent inorganic cation homeostasis,An abnormality of divalent inorganic cation homeostasis.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4023648,,,,,,,,,,,,,,,,,,,,,,,,,Abnormality of divalent inorganic cation homeostasis,,,,HP:0010927,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal blood inorganic cation concentration,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An abnormality of divalent inorganic cation homeostasis.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0010929,Abnormal blood cation concentration,Abnormality of cation homeostasis,An abnormality of cation homeostasis.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4023646,,,,,,,,,,,,,,,,,,,,,,,,,Abnormality of cation homeostasis,,,,HP:0010929,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal blood cation concentration,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An abnormality of cation homeostasis.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000103,obsolete: NCBI BioProject data item,,An NCBI BioProject data item is a datum within the NCBI BioProject standard collection,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000227,,,,,,,,,,,,,,,,,,,GENEPIO:0000103,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: NCBI BioProject data item,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,http://purl.obolibrary.org/obo/GENEPIO_0001836,,,An NCBI BioProject data item is a datum within the NCBI BioProject standard collection,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001489,bioinformatics protocol,bioinformatics protocol,A data field which describes the name and version number of the bioinformatics protocol used.,FALSE,,,,,,,PCDS:bioinformatics_protocol,,,,,,,PCDS: Provide the name of the protocol used to perform the species identification (i.e. the name of the protocol to perform the EZBioCloud search).,,,,,,,,,,,,,,PCDS: EZBioCloud_searchprotocol_2023.txt,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,bioinformatics protocol,bioinformatics protocol slot,,,,GENEPIO:0001489,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,bioinformatics protocol,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the name and version number of the bioinformatics protocol used.,,PCDS: A description of the overall bioinformatics strategy used.,,,,,,
http://purl.obolibrary.org/obo/OMRSE_00000001,human social role,,A social role inhering in a human being.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OMRSE:00000001,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/omrse.owl,,,,,,,,,human social role,,,,,,,,,,,,,,,,,,,,,,,,,,,,William R. Hogan|Mathias Brochhausen,,,,A social role inhering in a human being.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0101115,influenza antiviral treatment date,,"PCDS: This field records the exact date when the antiviral treatment was administered. The date should be provided in a standard format, i.e., ISO 8601 format 'YYYY-MM-DD', and reflect the first administration date if multiple doses were given.",FALSE,,,,,,,PCDS:influenza_antiviral_treatment_date,,,,,,,"PCDS: This field records the exact date when the antiviral treatment was administered. The date should be provided in a standard format, i.e., ISO 8601 format 'YYYY-MM-DD', and reflect the first administration date if multiple doses were given.",,,,,,,,,,,,,,PCDS: 2020-11-15,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0101115,,,,,,,,,,,,,,2026-04-13T17:16:47.336Z,,,,,,,,,,,,,,,,,,,influenza antiviral treatment date,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PCDS: The date on which the influenza antiviral agent was administered to a patient as part of treatment,,,,,,
http://purl.obolibrary.org/obo/ENVO_00002001,waste water,,Water that has been adversely affected in quality by anthropogenic influence.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Waste_water|SWEETRealm:Wastewater|EcoLexicon:waste_water,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00002001,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,http://purl.oboInOwllibrary.org/oboInOwl/envo#EnvO-Lite-GSC,,,,,,,,waste water,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Water that has been adversely affected in quality by anthropogenic influence.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100120,Illumina iSeq,,A DNA sequencer manufactured by the Illumina corporation using sequence-by-synthesis chemistry that is lightweight.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100120,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,Illumina iSeq,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A DNA sequencer manufactured by the Illumina corporation using sequence-by-synthesis chemistry that is lightweight.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03460253,curing or aging,,"Modified through complex enzymatic or microbial processes resulting in physicochemical changes in particular with respect to texture, flavor, color or shelf life of the food product. Such changes may be induced by the introduction of certain chemicals, such as sodium sulfite, salt, sugar, or other substances, such as phenolics, in dry or liquid form and often aided by smoke. Cheese should always be indexed by the appropriate narrower term under *LACTIC ACID-OTHER AGENT FERMENTED*.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=H0253,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03460253,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,curing or aging,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Modified through complex enzymatic or microbial processes resulting in physicochemical changes in particular with respect to texture, flavor, color or shelf life of the food product. Such changes may be induced by the introduction of certain chemicals, such as sodium sulfite, salt, sugar, or other substances, such as phenolics, in dry or liquid form and often aided by smoke. Cheese should always be indexed by the appropriate narrower term under *LACTIC ACID-OTHER AGENT FERMENTED*.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C25464,Country,Country|COUNTRY,"A collective generic term that refers here to a wide variety of dependencies, areas of special sovereignty, uninhabited islands, and other entities in addition to the traditional countries or independent states.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Country|COUNTRY,,,,NCIT:C25464,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Country,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GEO_000000396,,,,,,,,,,"A collective generic term that refers here to a wide variety of dependencies, areas of special sovereignty, uninhabited islands, and other entities in addition to the traditional countries or independent states.",,,,,,,,
http://purl.obolibrary.org/obo/HP_0100749,Chest pain,Thoracic pain|Chest pain,"An unpleasant sensation characterized by physical discomfort (such as pricking, throbbing, or aching) localized to the chest.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0008031|SNOMEDCT_US:29857009,,,,,,,,,,,,,,,,,,,,,,,,,Thoracic pain|Chest pain,,,,HP:0100749,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Chest pain,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An unpleasant sensation characterized by physical discomfort (such as pricking, throbbing, or aching) localized to the chest.",,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00002651,"populated place, Italy",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00002651,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Italy",http://purl.obolibrary.org/obo/GAZ_00002650,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002088,draft sequence repository data - antibiogram,,"A dataset of the minimal inhibitory concentrations (value, unit, sign (<,>, =)) and resistance phenotypes (resistant, sensitive or undetermined) of the sequenced isolate against different antibiotics tested.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002088,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,draft sequence repository data - antibiogram,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"A dataset of the minimal inhibitory concentrations (value, unit, sign (<,>, =)) and resistance phenotypes (resistant, sensitive or undetermined) of the sequenced isolate against different antibiotics tested.",,,"order:
GENEPIO:0001100 # antimicrobial drug tests
GENEPIO:0002101 # test drug minimum concentration
GENEPIO:0002100 # test drug maximum concentration
GENEPIO:0002045 # antimicrobial resistance testing method
GENEPIO:0002047 # antimicrobial testing method version or reagent
GENEPIO:0002062 # antimicrobial resistance testing reference standard
GENEPIO:0002049 # antimicrobial resistance testing platform",,,,,
http://purl.obolibrary.org/obo/NCBITaxon_8930,Columbidae,,,FALSE,,,,,,,pigeons,,,,,,,,,,,,,,,,,,,Columbidae,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:8930,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Columbidae,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001425,sequencing assembly datum,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001425,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/NCIT_C53471,,,,,,sequencing assembly datum,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000428,biome,major habitat type,A biome is an ecosystem which is undergoing climactic ecological succession.,FALSE,,,,,,,,,,,,,,"In this definition, there is an assumption that no major perturbations are occurring or have occurred in a time frame affects the successional dynamics of the ecosystem. A ""major"" perturbation is one which disrupts the community's ability to restore its (near) equilibrium. Usually, pioneer or early secondary successional processes would be in effect in such scenarios.",,,,,,,,,,,,,,,,,,LTER:809|EcoLexicon:biome,,,,,,,,,,,,,,,,,,,,,,,,,major habitat type,,,,ENVO:00000428,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,biome,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A biome is an ecosystem which is undergoing climactic ecological succession.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470151,preservation of food component by heat treatment,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0151,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470151,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,preservation of food component by heat treatment,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0101108,influenza subtype,PCDS:Taxonomic identification information,,FALSE,,,,,,,PCDS:influenza_subtype,,,,,,,,,,,,,,,,,,,,,,,,uncurated,,,,,,,,,,,,,,,,,,,,,,,,,PCDS:Taxonomic identification information,,,,,GENEPIO:0101108,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-21T01:45:57.696Z,,,,,,,,,,,,,,,,,,,influenza subtype,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_16869,oleandomycin,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:7737|CHEBI:25659|CHEBI:14682,,,,,,CHEBI:16869,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,oleandomycin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_65212,polysaccharide derivative,,A carbohydrate derivative that is any derivative of a polysaccharide.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:65212,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,polysaccharide derivative,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A carbohydrate derivative that is any derivative of a polysaccharide.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000125,draft pathogenic epi case exposure record,,"The draft epi case exposure model describes datums related to the possible transmission of a pathogen between a case person and other people, places, animals etc.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000125,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,draft pathogenic epi case exposure record,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"The draft epi case exposure model describes datums related to the possible transmission of a pathogen between a case person and other people, places, animals etc.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0101716,genome sequence file path,,PCDS: Provide the filepath of the genome sequence FASTA file.,FALSE,,,,,,,PCDS:genome_sequence_file_path,,,,,,,PCDS: Provide the filepath of the genome sequence FASTA file.,,,,,,,,,,,,,,PCDS: /User/Documents/ViralLab/Data/mevassembly.fasta,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0101716,,,,,,,,,,,,,,2026-04-13T17:16:47.336Z,,,,,,,,,,,,,,,,,,,genome sequence file path,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PCDS: The filepath of the consensus sequence file.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100955,passive composite sampling,,A method of composite sampling in which a continuous sample is collected passively without electrical input.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100955,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-11-20T16:24:25Z,,,,,,,,,,,,,,,,,,,passive composite sampling,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A method of composite sampling in which a continuous sample is collected passively without electrical input.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000030,beef sirloin tip steak (raw),,A raw beef sirloin tip steak.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000030,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef sirloin tip steak (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef sirloin tip steak.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001997,colony forming unit per 100 milliliter,,A colony forming unit count which is a count of viable bacterial numbers in 100 milliliters of liquid.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,Should this be deprecated?  Need to find working examples that actually use / 100mL.,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001997,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,colony forming unit per 100 milliliter,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A colony forming unit count which is a count of viable bacterial numbers in 100 milliliters of liquid.,,,,cfu/100mL,,,,
http://purl.obolibrary.org/obo/UBERON_0009097,gravid organism,,"An organism containing a developing embryo, fetus, or unborn offspring within the body.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,IDOMAL:0000443|BTO:0004733,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0009097,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,gravid organism,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An organism containing a developing embryo, fetus, or unborn offspring within the body.",,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00002572,Province of Prince Edward Island,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00002572,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Province of Prince Edward Island,http://purl.obolibrary.org/obo/GAZ_00047694,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00002576,Yukon,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00002576,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Yukon,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00002573,Territory (Canada),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00002573,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Territory (Canada),http://purl.obolibrary.org/obo/GAZ_00002560,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00002574,Nunavut,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00002574,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Nunavut,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00002575,Northwest Territories,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00002575,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Northwest Territories,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00002570,Province of New Brunswick,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00002570,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Province of New Brunswick,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00002571,Province of Manitoba,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00002571,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Province of Manitoba,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_3463,breast disease,,A disease of anatomical entity that is located_in the breast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:3463,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,breast disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A disease of anatomical entity that is located_in the breast.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_11851,indeterminate leprosy,,A leprosy that is an early form of the disease which causes one to a few hypopigmented or erythematous macules.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:11851,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,indeterminate leprosy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A leprosy that is an early form of the disease which causes one to a few hypopigmented or erythematous macules.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02021806,"animal fillet (with skin, raw)",,A raw animal fillet that contains skin.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02021806,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"animal fillet (with skin, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw animal fillet that contains skin.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001943,CF-H method,,Cot-filtered highly repetitive genomic DNA,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI SRA: CF-H,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001943,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CF-H method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Cot-filtered highly repetitive genomic DNA,,,,,,,,
http://purl.obolibrary.org/obo/CIDO_0000019,COVID-19 RT-PCR assay,,,FALSE,,,,,,,SARS COV-2 RT-PCR,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7170415/|https://www.fda.gov/medical-devices/emergency-situations-medical-devices/emergency-use-authorizations#covid19ivd,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CIDO:0000019,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/cido.owl,,,,,,,,,COVID-19 RT-PCR assay,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Oliver He, Asiyah Yu Lin|A COVID-19 nucleic acid diagnostic assay that uses RT-PCR",,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0011374,prepuce,,A retractable double-layered fold of skin and mucous membrane that covers the glans penis or clitoris. Glands may also be present.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCIT:C12323,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0011374,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,prepuce,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A retractable double-layered fold of skin and mucous membrane that covers the glans penis or clitoris. Glands may also be present.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0040202,Abnormal consumption behavior,Abnormal consumption behaviour,"Recurrent abnormal consumption of food, liquids, or objects that could have negative consequences for the individual.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4073150,,,,,,,,,,,,,,,,,,,,,,,,,Abnormal consumption behaviour,,,,HP:0040202,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal consumption behavior,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Recurrent abnormal consumption of food, liquids, or objects that could have negative consequences for the individual.",,,,,,,,
http://purl.obolibrary.org/obo/ENVO_03501217,tissue paper,tissue,A paper product which is thin translucent paper.,FALSE,,,,,,,,,,,,,,Tissue paper is often used for wrapping or for protecting delicate articles.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,tissue,,,,ENVO:03501217,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,tissue paper,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A paper product which is thin translucent paper.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0002814,specimen collection device,,A device used to collect a specimen.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,specimen collection device,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0002814,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,specimen collection device,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://orcid.org/0000-0002-8844-9165,,,,A device used to collect a specimen.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100066,fever (>=38°C),fever (>=100.4°F),Fever that exceeds 38 degrees centigrade.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,fever (>=100.4°F),,,,GENEPIO:0100066,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,fever (>=38°C),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Fever that exceeds 38 degrees centigrade.,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_9673,Viverridae,,,FALSE,,,,,,,civets,,,,,,,,,,,,,,,,,,,Viverridae,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:9673,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Viverridae,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_03501134,healthcare facility,medical facility|health facility,A human construction in which healthcare is provided.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,medical facility|health facility,,,,ENVO:03501134,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,healthcare facility,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A human construction in which healthcare is provided.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_72588,semisynthetic derivative,,Any organic molecular entity derived from a natural product by partial chemical synthesis.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:72588,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,semisynthetic derivative,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any organic molecular entity derived from a natural product by partial chemical synthesis.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_33853,phenols,,Organic aromatic compounds having one or more hydroxy groups attached to a benzene or other arene ring.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:29322|CHEBI:2857|CHEBI:25969|CHEBI:13825|CHEBI:13664,,,,,,CHEBI:33853,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,phenols,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Organic aromatic compounds having one or more hydroxy groups attached to a benzene or other arene ring.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C19157,Specimen,Specimen|Sample|Research Specimen,"A part of a thing, or of several things, taken to demonstrate or to determine the character of the whole, e.g. a substance, or portion of material obtained for use in testing, examination, or study; particularly, a preparation of tissue or bodily fluid taken for examination or diagnosis.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Specimen|Sample|Research Specimen,,,,NCIT:C19157,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Specimen,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A part of a thing, or of several things, taken to demonstrate or to determine the character of the whole, e.g. a substance, or portion of material obtained for use in testing, examination, or study; particularly, a preparation of tissue or bodily fluid taken for examination or diagnosis.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000169,beef petite sirloin roast,,A small roast section of the bottom sirloin opposite the sirloin tip in the beef round.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000169,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef petite sirloin roast,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A small roast section of the bottom sirloin opposite the sirloin tip in the beef round.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510054,fat free food,,"A claim that a food is fat-free, and any claim likely to have the same meaning for the consumer, may only be made where the product contains no more than 0,5 g of fat per 100 g or 100 ml. However, claims expressed as ""X % fat-free""shall be prohibited [REGULATION (EC) No 1924/2006 Corrigendum].

Food having less than 0.5 grams fat per amount customarily consumed. Meals and main dishes have less than 0.5 grams fat per labeled serving. Such foods must contain no ingredient that is fat or understood to contain fat except when the ingredient listed has been footnoted '*adds a trivial amount of fat'.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0054,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510054,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,fat free food,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A claim that a food is fat-free, and any claim likely to have the same meaning for the consumer, may only be made where the product contains no more than 0,5 g of fat per 100 g or 100 ml. However, claims expressed as ""X % fat-free""shall be prohibited [REGULATION (EC) No 1924/2006 Corrigendum].

Food having less than 0.5 grams fat per amount customarily consumed. Meals and main dishes have less than 0.5 grams fat per labeled serving. Such foods must contain no ingredient that is fat or understood to contain fat except when the ingredient listed has been footnoted '*adds a trivial amount of fat'.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020686,poultry material,,Material that derives from some poultry.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020686,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,poultry material,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Material that derives from some poultry.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02021375,butchery cut of veal,,A piece of veal meat which has been cut according to butchery practice.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02021375,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,butchery cut of veal,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A piece of veal meat which has been cut according to butchery practice.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C166129,Adoptive Parent,Adoptive Parent,A parent in the parent-child relationship established by a legal adoption proceeding.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Adoptive Parent,,,,NCIT:C166129,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Adoptive Parent,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A parent in the parent-child relationship established by a legal adoption proceeding.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03500014,beer beverage can enamel surface,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=N0014,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03500014,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beer beverage can enamel surface,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0000001,disease,"other disease|medical condition|disorders|disorder|diseases and disorders|diseases|disease or disorder, non-neoplastic|disease or disorder|disease|condition",A disease is a disposition to undergo pathological processes that exists in an organism because of one or more disorders in that organism.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0012634|SCTID:64572001|Orphanet:377788|OGMS:0000031|NCIT:C2991|MESH:D004194|MEDGEN:4347|ICD9:799.9|DOID:4,,,,,,,,,,,,,,,,,,,,,,,,,"other disease|medical condition|disorders|disorder|diseases and disorders|diseases|disease or disorder, non-neoplastic|disease or disorder|disease|condition",,,,MONDO:0000001,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl|http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#ordo_disorder,,,,,,,,disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A disease is a disposition to undergo pathological processes that exists in an organism because of one or more disorders in that organism.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0016378,ileocolic lymph node,ileocecocolic lymph node,One of the lymph nodes that form a chain around the ileocolic artery.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Ileocolic_lymph_nodes|UMLS:C2697661|SCTID:29180003|NCIT:C77653|MA:0003065|FMA:16611,,,,,,,,,,,,,,,,,,,,,,,,,nodi lymphoidei ileocolici,ileocecocolic lymph node,,,UBERON:0016378,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,ileocolic lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,One of the lymph nodes that form a chain around the ileocolic artery.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0016374,sciatic lymph node,,"A lymph node that is medial to the gluteus superficialis m., caudal to gluteus medius m. and sciatic nerve lymph node.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MA:0002884,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0016374,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,sciatic lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A lymph node that is medial to the gluteus superficialis m., caudal to gluteus medius m. and sciatic nerve lymph node.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100060,subject age at time of specimen collection bin,,"Age of host at the time of sampling, expressed as an age group in years.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ready for release,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100060,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,subject age at time of specimen collection bin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Age of host at the time of sampling, expressed as an age group in years.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02021379,veal retail cut,,"A veal meat cut that is derived from a sub-primal, individual muscle cut or minor primal cut.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02021379,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,veal retail cut,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A veal meat cut that is derived from a sub-primal, individual muscle cut or minor primal cut.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_45257,ribostamycin,,"An amino cyclitol glycoside that is 4,6-diaminocyclohexane-1,2,3-triol having a 2,6-diamino-2,6-dideoxy-α-<small>D</small>-glucosyl residue attached at position 1 and a β-<small>D</small>-ribosyl residue attached at position 2. It is an antibiotic produced by <em>Streptomyces ribosidificus</em> (formerly <em>S. thermoflavus</em>).",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:45257,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,ribostamycin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An amino cyclitol glycoside that is 4,6-diaminocyclohexane-1,2,3-triol having a 2,6-diamino-2,6-dideoxy-α-<small>D</small>-glucosyl residue attached at position 1 and a β-<small>D</small>-ribosyl residue attached at position 2. It is an antibiotic produced by <em>Streptomyces ribosidificus</em> (formerly <em>S. thermoflavus</em>).",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530063,belly meat,,Boneless skeletal meat from the lower sides of meat animals; usually belly meat is smoked and cured to produce bacon.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0063,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530063,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,belly meat,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Boneless skeletal meat from the lower sides of meat animals; usually belly meat is smoked and cured to produce bacon.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000309,depressed landform,depression,A landform sunken or depressed below the surrounding area.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,TGN:21521|TGN:21497|TGN:21454|SWEETRealm:Depression|Geonames:T.PANS|Geonames:T.PAN|Geonames:T.DPR|FTT:216|FTT:215|FTT:175|EcoLexicon:depression,,,,,,,,,,,,,,,,,,,,,,,,depression,,,,,ENVO:00000309,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,depressed landform,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A landform sunken or depressed below the surrounding area.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490328,"regenerated cellulose film, coloured",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0328,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490328,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"regenerated cellulose film, coloured",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HP_0000157,Abnormality of the tongue,Tongue abnormality|Lingual abnormality|Glossal abnormality|Abnormality of the tongue|Abnormal tongue,Any abnormality of the tongue.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0878638,,,,,,,,,,,,,,,,,,,,,,,,,Tongue abnormality|Lingual abnormality|Glossal abnormality|Abnormality of the tongue|Abnormal tongue,,,,HP:0000157,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,http://purl.oboInOwllibrary.org/oboInOwl/hp#hposlim_core,,,,,,,,Abnormality of the tongue,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any abnormality of the tongue.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0000153,Abnormality of the mouth,Abnormality of the mouth|Abnormal mouth,An abnormality of the mouth.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0026633|SNOMEDCT_US:128334002,,,,,,,,,,,,,,,,,,,,,,,,,Abnormality of the mouth|Abnormal mouth,,,,HP:0000153,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,http://purl.oboInOwllibrary.org/oboInOwl/hp#hposlim_core,,,,,,,,Abnormality of the mouth,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An abnormality of the mouth.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0000152,Abnormality of head or neck,Head and neck abnormality|Abnormality of head or neck,An abnormality of head and neck.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4021817,,,,,,,,,,,,,,,,,,,,,,,,,Head and neck abnormality|Abnormality of head or neck,,,,HP:0000152,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormality of head or neck,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An abnormality of head and neck.,,,,,,,,
http://purl.obolibrary.org/obo/PATO_0001340,hermaphrodite,intersex|hermaphroditic,A biological sex quality inhering in an organism or a population with both male and female sexual organs in one individual.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI BioSample: hermaphrodite,,,,,,,,,,,,,,,,,,,,,,,,,intersex|hermaphroditic,,,,PATO:0001340,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/pato.owl,http://purl.oboInOwllibrary.org/oboInOwl/pato#value_slim,,,,,,,,hermaphrodite,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A biological sex quality inhering in an organism or a population with both male and female sexual organs in one individual.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_5653,hemiacetal,,A compound having the general formula RR'C(OH)OR'' (R'' ≠ H).,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:5653,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,hemiacetal,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A compound having the general formula RR'C(OH)OR'' (R'' ≠ H).,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_03000061,"populated place, Macedonia",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:03000061,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Macedonia",http://purl.obolibrary.org/obo/GAZ_00006895,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03450023,steaming without pressure,,Cooked suspended above boiling water.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=G0023,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03450023,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,steaming without pressure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Cooked suspended above boiling water.,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0003780,T-cell immunodeficiency,T-lymphocyte immunodeficiency|T-lymphocyte deficiency (finding)|T-cell immunodeficiency,A broad classification of disorders that affect the cell-mediated aspect of the immune response. Circulating numbers of T lymphocytes are decreased or ineffective.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C1274233|SCTID:402792003|NCIT:C27145|MEDGEN:226894|GARD:0005107|DOID:613,,,,,,,,,,,,,,,,,,,,,,,,,T-lymphocyte immunodeficiency|T-lymphocyte deficiency (finding)|T-cell immunodeficiency,,,,MONDO:0003780,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#rare|http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar|http://purl.oboInOwllibrary.org/oboInOwl/mondo#gard_rare,,,,,,,,T-cell immunodeficiency,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A broad classification of disorders that affect the cell-mediated aspect of the immune response. Circulating numbers of T lymphocytes are decreased or ineffective.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100922,experimental control details,experimental control details,A data field which describes the details regarding the experimental control contained in the sample.,FALSE,,,,,,,PCDS:experimental_control_details,,,,,,,"PCDS: Provide details regarding the nature of the sample used as a control, or what is was used to monitor.",,,,,,,,,,,Drafted 2023-07-27,,,PCDS: Pure non-inoculated growth medium used as a negative control,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,experimental control details,experimental control details slot,,,,GENEPIO:0100922,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,experimental control details,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the details regarding the experimental control contained in the sample.,,PCDS: The details regarding the experimental control contained in the sample.,,,,,,
http://purl.obolibrary.org/obo/CHEBI_38102,triazines,,Compounds based on a triazine skeleton.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:38102,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,triazines,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Compounds based on a triazine skeleton.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001045,municipal water,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001045,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,municipal water,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000033,beef sirloin tip side steak,,A steak cut from the beef sirloin tip side roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000033,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef sirloin tip side steak,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A steak cut from the beef sirloin tip side roast.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00003927,stable manure,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00003927,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,stable manure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001474,depth of coverage value,depth of coverage value,A data field which describes the average number of reads representing a given nucleotide in the reconstructed sequence.,FALSE,,,,,,,PCDS:depth_of_coverage_value,,,,,,,PCDS: Provide value as a fold of coverage.,,,,,,,,,,,,,,PCDS: 400,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,depth of coverage value,depth of coverage value slot,,,,GENEPIO:0001474,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,depth of coverage value,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the average number of reads representing a given nucleotide in the reconstructed sequence.,,PCDS: The average number of reads representing a given nucleotide in the reconstructed sequence.,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490207,capsule,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0207,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490207,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,capsule,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510247,unsaturated fat claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0247,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510247,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,unsaturated fat claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001142,sra accession,SRA_accession|SRA accession,"An identifier field which describes the Sequence Read Archive (SRA), European Nucleotide Archive (ENA) or DDBJ Sequence Read Archive (DRA) identifier linking raw read data, methodological metadata and quality control metrics submitted to the International Nucleotide Sequence Database Collaboration (INSDC).",FALSE,,,,,,,PCDS:sra_accession,,,,,,,PCDS: Store the accession assigned to the submitted 'run'. NCBI-SRA accessions start with SRR.,,,,,,,,,,,,,,PCDS: SRR11177792,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,SRA_accession|SRA accession,Sequence Read Archive accession slot|Sequence Read Archive accession field|SRA accession slot,,,,GENEPIO:0001142,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,sra accession,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An identifier field which describes the Sequence Read Archive (SRA), European Nucleotide Archive (ENA) or DDBJ Sequence Read Archive (DRA) identifier linking raw read data, methodological metadata and quality control metrics submitted to the International Nucleotide Sequence Database Collaboration (INSDC).",,"PCDS: The Sequence Read Archive (SRA) identifier linking raw read data, methodological metadata and quality control metrics submitted to the INSDC.",,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100082,variant of concern (SARS-CoV-2),VoC|VOC,"A variant designation which is 1) a variant of the Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2), 2) believed to have genetic mutations that increase binding affinity to human cells, 3) linked to rapid spread in human populations, and 4) is being monitored.",FALSE,,,,,,,Variant of Concern (VOC),,,,,,,PHA4GE Definition: A category used for indicating that a variant of the Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) containing genetic mutations believed to increase binding affinity to human cells and linked to rapid spread in human populations is being monitored.,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,VoC|VOC,,,,GENEPIO:0100082,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,variant of concern (SARS-CoV-2),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A variant designation which is 1) a variant of the Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2), 2) believed to have genetic mutations that increase binding affinity to human cells, 3) linked to rapid spread in human populations, and 4) is being monitored.",,,,,,,,
http://purl.obolibrary.org/obo/UO_0000052,mass density unit,mass per unit volume,A density unit which is a standard measure of the mass of a substance in a given volume.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,mass per unit volume,,,,UO:0000052,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,mass density unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A density unit which is a standard measure of the mass of a substance in a given volume.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000051,concentration unit,,A unit which represents a standard measurement of how much of a given substance there is mixed with another substance.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:0000051,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,concentration unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A unit which represents a standard measurement of how much of a given substance there is mixed with another substance.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000059,specific volume unit,,A unit which is a standard measure of the volume of a given mass of substance (the reciprocal of density).,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:0000059,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,specific volume unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A unit which is a standard measure of the volume of a given mass of substance (the reciprocal of density).,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000056,molar volume unit,,A unit which is a standard measure of the volume of a homogeneous substance containing 6.02 x 1023 atoms or molecules.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:0000056,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,molar volume unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A unit which is a standard measure of the volume of a homogeneous substance containing 6.02 x 1023 atoms or molecules.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001782,upload modified date,,Date an uploaded sample was re-uploaded or had its metadata modified.,FALSE,,,,,http://purl.obolibrary.org/obo/GENEPIO_0000024,,,,,,,,,,,,,,,,,,,,,,,,,,,PulseNet: UploadModifiedDate,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001782,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,upload modified date,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,PulseNet spreadsheet,,Date an uploaded sample was re-uploaded or had its metadata modified.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000133,beef strip fillet,,A thick cut but smaller diameter than beef strip steak.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000133,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef strip fillet,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A thick cut but smaller diameter than beef strip steak.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470139,food dry salting,,Packed in dry salt in sufficient quantity to suppress enzyme activity or growth of undesirable organisms.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0139,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470139,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food dry salting,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Packed in dry salt in sufficient quantity to suppress enzyme activity or growth of undesirable organisms.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0013757,capillary blood,portion of capillary blood|portion of blood in capillary|blood in capillary,A blood that is part of a capillary.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCIT:C32212|FMA:263901,,,,,,,,,,,,,,,,,,,,,,,,,portion of capillary blood|portion of blood in capillary|blood in capillary,,,,UBERON:0013757,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,capillary blood,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A blood that is part of a capillary.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0013756,venous blood,venous blood|portion of venous blood|blood in vein,A blood that is part of a vein.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:83067|BTO:0006187,,,,,,,,,,,,,,,,,,,,,,,,,venous blood|portion of venous blood|blood in vein,,,,UBERON:0013756,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,venous blood,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A blood that is part of a vein.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0013755,arterial blood,portion of arterial blood|blood in artery|arterial blood,A blood that is part of a artery.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:83066|BTO:0006188,,,,,,,,,,,,,,,,,,,,,,,,,portion of arterial blood|blood in artery|arterial blood,,,,UBERON:0013755,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,arterial blood,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A blood that is part of a artery.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100975,ABI PRISM 310 Genetic Analyzer,,An Applied Biosystems sequencing instrument model which utilises a single capillary electrophoresis system to perform Sanger sequencing and fragment analysis that is automated.,FALSE,,,,,,,AB 310 sequencer|AB 310 Genetic Analyzer,,,,,,,"Fragment analysis including linkage analysis, single-nucleotide polymorphism detection, discovery and validation. The 310 Genetic Analyzer separates DNA fragments by using POP Performance Optimized Polymers.",,,,,,,https://assets.thermofisher.com/TFS-Assets/LSG/Specification-Sheets/cms_040736.pdf,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100975,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2023-11-28T18:23:15.862Z,,,,,,,,,,,,,,,,,,,ABI PRISM 310 Genetic Analyzer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An Applied Biosystems sequencing instrument model which utilises a single capillary electrophoresis system to perform Sanger sequencing and fragment analysis that is automated.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001156,sample collector contact email,sample_collector_contact_email|sample collector contact email,A data field which describes the email address of the contact responsible for follow-up regarding the sample.,FALSE,,,,,,,PCDS:sample_collector_contact_email,,,,,,,PCDS: The email address can represent a specific individual or laboratory.,,,,,,,,,,,,,,PCDS: RespLab@lab.ca,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,sample_collector_contact_email|sample collector contact email,sample collector contact email slot,,,,GENEPIO:0001156,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,sample collector contact email,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the email address of the contact responsible for follow-up regarding the sample.,,PCDS: The email address of the contact responsible for follow-up regarding the sample.,,,,,,
http://purl.obolibrary.org/obo/OMIT_0002019,"Amino Acids, Peptides, and Proteins",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OMIT:0002019,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/omit.owl,,,,,,,,,"Amino Acids, Peptides, and Proteins",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001614,subject description,,"A subject description is a field containing additional information about an organism (related to an investigation, study and/or specimen) that is not included in other defined vocabulary fields.",FALSE,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0001835,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001614,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,subject description,,,http://purl.obolibrary.org/obo/GENEPIO_0001835,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"A subject description is a field containing additional information about an organism (related to an investigation, study and/or specimen) that is not included in other defined vocabulary fields.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_8478,actinomycosis,,"A commensal bacterial infectious disease that results in infection, which is characterized by contiguous spread, suppurative and granulomatous inflammation, and formation of multiple abscesses and sinus tracts that may discharge sulfur granules, has_material_basis_in Actinomyces israelii, has_material_basis_in Actinomyces gerencseriae, has_material_basis_in Actinomyces naeslundii, has_material_basis_in Actinomyces odontolyticus, has_material_basis_in Actinomyces viscosus, has_material_basis_in Actinomyces meyeri, has_material_basis_in Propionibacterium propionicum, which require a break in the integrity of the mucous membranes and the presence of devitalized tissue to invade deeper body structures.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:8478,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,actinomycosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A commensal bacterial infectious disease that results in infection, which is characterized by contiguous spread, suppurative and granulomatous inflammation, and formation of multiple abscesses and sinus tracts that may discharge sulfur granules, has_material_basis_in Actinomyces israelii, has_material_basis_in Actinomyces gerencseriae, has_material_basis_in Actinomyces naeslundii, has_material_basis_in Actinomyces odontolyticus, has_material_basis_in Actinomyces viscosus, has_material_basis_in Actinomyces meyeri, has_material_basis_in Propionibacterium propionicum, which require a break in the integrity of the mucous membranes and the presence of devitalized tissue to invade deeper body structures.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001044,water related exposure event,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001044,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,water related exposure event,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_38064,heteroarenecarboxylate ester,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:38064,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,heteroarenecarboxylate ester,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490206,husk wrapper,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0206,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490206,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,husk wrapper,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C116117,Inhibitory Concentration Test,Inhibitory Concentration Test,"A laboratory test to determine the concentration of a substance that will inhibit a biological or biochemical function, such as microorganism growth or enzymatic activity.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Inhibitory Concentration Test,,,,NCIT:C116117,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Inhibitory Concentration Test,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A laboratory test to determine the concentration of a substance that will inhibit a biological or biochemical function, such as microorganism growth or enzymatic activity.",,,,,,,,
https://w3id.org/linkml/LocalName,LocalName,,An attributed label.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,linkml:LocalName,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An attributed label.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0001614,GenBank ID,,A CRID symbol uniquely indentifies the submitted GeneBank sequence record.,FALSE,,,,,,,,,,,,,,,,,,,,,NIAID GSCID-BRC metadata working group,,,,,GenBank ID,,,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0001614,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GenBank ID,,,,,,,GenBank Record ID,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/books/NBK21091/table/ch18.T.refseq_accession_numbers_and_mole/|http://www.ncbi.nlm.nih.gov/Sequin/acc.html|http://www.ebi.ac.uk/miriam/main/datatypes/MIR:00000350,,,,,,"Person: Chris Stoeckert, Jie Zheng",,,,A CRID symbol uniquely indentifies the submitted GeneBank sequence record.,,,,,,,^SAM[NED](\w)?\d+$,
http://purl.obolibrary.org/obo/HP_0000458,Anosmia,Lost smell|Loss of smell,"An inability to perceive odors. This is a general term describing inability to smell arising in any part of the process of smelling from absorption of odorants into the nasal mucous overlying the olfactory epithelium, diffusion to the cilia, binding to olfactory receptor sites, generation of action potentials in olfactory neurons, and perception of a smell.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0003126|SNOMEDCT_US:44169009,,,,,,,,,,,,,,,,,,,,,,,,,Lost smell|Loss of smell,,,,HP:0000458,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,http://purl.oboInOwllibrary.org/oboInOwl/hp#hposlim_core,,,,,,,,Anosmia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An inability to perceive odors. This is a general term describing inability to smell arising in any part of the process of smelling from absorption of odorants into the nasal mucous overlying the olfactory epithelium, diffusion to the cilia, binding to olfactory receptor sites, generation of action potentials in olfactory neurons, and perception of a smell.",,,,,,,,
http://purl.obolibrary.org/obo/APOLLO_SV_00000497,count of disease cases,,A count of individuals in a population who meet the criteria of some case definition during some time interval.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,APOLLO_SV:00000497,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/apollo_sv.owl,,,,,,,,,count of disease cases,,,,,,,,,,,,,,,,,,,,,,,,,,,,William R. Hogan|Matthew Diller,,,,A count of individuals in a population who meet the criteria of some case definition during some time interval.,,,,,,,,
http://purl.obolibrary.org/obo/APOLLO_SV_00000498,count of cases in an epidemic,,A count of disease cases in an infected population that meet the case definition criteria within a particular epidemic interval.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,APOLLO_SV:00000498,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/apollo_sv.owl,,,,,,,,,count of cases in an epidemic,,,,,,,,,,,,,,,,,,,,,,,,,,,,William R. Hogan|Matthew Diller,,,,A count of disease cases in an infected population that meet the case definition criteria within a particular epidemic interval.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0050686,organ system cancer,,A cancer that is classified based on the organ it starts in.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0050686,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,organ system cancer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A cancer that is classified based on the organ it starts in.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02010186,"piece of animal breast (skinless, raw)",,A raw piece of skinless animal breast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02010186,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"piece of animal breast (skinless, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw piece of skinless animal breast.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100620,cellular respiration type field category,PCDS:strain and isolation information,PCDS: Select the respiration type from the pick list.,FALSE,,,,,,,PCDS:cellular_respiration_type_slot_group,,,,,,,PCDS: Select the respiration type from the pick list.,,,,,,,,,,,,,,PCDS: Aerobic respiration,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,PCDS:strain and isolation information,strain and isolation information slot category,,,,GENEPIO:0100620,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,cellular respiration type field category,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PCDS: An isolate datum specifying the type of cellular respiration process used by the organism.,,,,,,
http://purl.obolibrary.org/obo/FOODON_03316683,fish fillets and minced fish (quick-frozen in blocks),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://bioregistry.io/reference/siren:F16683,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03316683,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,fish fillets and minced fish (quick-frozen in blocks),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0050004,seminal vesicle acute gonorrhea,,"A gonococcal seminal vesiculitis that is characterized by back pain, perineal pain, pain with ejaculation, hematospermia and voiding symptoms resulting from inflammation located_in the seminal vesicles caused by Neisseria gonorrhoeae infection.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0050004,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,seminal vesicle acute gonorrhea,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A gonococcal seminal vesiculitis that is characterized by back pain, perineal pain, pain with ejaculation, hematospermia and voiding symptoms resulting from inflammation located_in the seminal vesicles caused by Neisseria gonorrhoeae infection.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_24062,fluorine molecular entity,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:24062,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,fluorine molecular entity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_91561,Artiodactyla,,,FALSE,,,,,,,even-toed ungulates & whales,,,,,,,,,,,,,,,,,,,Artiodactyla,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:91561,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Artiodactyla,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001720,obsolete: swab - food contact surface,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000229,,,,,,,,,,,,,,,,,,,GENEPIO:0001720,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: swab - food contact surface,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00009238,Province (North Korea),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00009238,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Province (North Korea),http://purl.obolibrary.org/obo/GAZ_00002801,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002147,sequencing facility name specification,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002147,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,sequencing facility name specification,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/OBI_0001891,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000570,selectivity ratio,,"The selectivity ratio (SR) is defined as the ratio of explained vexpl,i to residual variance vres,i for
the variable i on the  target projection (TP) component in the context of Partial Least Squares Analysis.",FALSE,,,,,,,,,,,,,,,,,,,,,https://onlinelibrary.wiley.com/doi/pdf/10.1002/cem.1289,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000570,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,selectivity ratio,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra,,,,"The selectivity ratio (SR) is defined as the ratio of explained vexpl,i to residual variance vres,i for
the variable i on the  target projection (TP) component in the context of Partial Least Squares Analysis.",,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0024643,myocardial disorder,myocardium disease or disorder|myocardium disease|myocardial disorder|myocardial disease|disorder of myocardium|disease or disorder of myocardium|disease of myocardium,"A disorder that affects the muscle tissue of the heart. Representative examples include myocardial infarction, myocarditis, and cardiomyopathy.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C3241958|SCTID:57809008|NCIT:C35544|MEDGEN:469033,,,,,,,,,,,,,,,,,,,,,,,,,myocardium disease or disorder|myocardium disease|myocardial disorder|myocardial disease|disorder of myocardium|disease or disorder of myocardium|disease of myocardium,,,,MONDO:0024643,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,myocardial disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A disorder that affects the muscle tissue of the heart. Representative examples include myocardial infarction, myocarditis, and cardiomyopathy.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490291,"aluminium can, drum or barrel, plastic coated",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0291,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490291,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"aluminium can, drum or barrel, plastic coated",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490157,textile or fabric container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0157,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490157,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,textile or fabric container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03440003,not heat-treated,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=F0003,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03440003,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,not heat-treated,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000703,hydrological precipitation process,precipitation,Hydrological precipitation is a process during which any product of the condensation of atmospheric water vapour is pulled to the planetary surface by gravity.,FALSE,,,,,,,,,,,,,,"""process"" is included in the label to make it clear that we are not referring to the precipitated material (e.g. snow, rain, sleet)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,precipitation,,,,,ENVO:01000703,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,hydrological precipitation process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Hydrological precipitation is a process during which any product of the condensation of atmospheric water vapour is pulled to the planetary surface by gravity.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0037865,jugular lymph node,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:232854,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0037865,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,jugular lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100978,AB 3500 Genetic Analyzer,,"An Applied Biosystems sequencing instrument model which performs capillary electrophoresis to sequence DNA and has 8 capillaries, which can run 96 well plates.",FALSE,,,,,,,AB 3500 sequencer,,,,,,,The 3500 series is the successor to the 3130 series and has a smaller footprint.,,,,,,,https://assets.thermofisher.com/TFS-Assets/LSG/Specification-Sheets/3500-Genetic-Analyzer-Specification-Sheet.pdf,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100978,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2023-11-28T18:23:15.862Z,,,,,,,,,,,,,,,,,,,AB 3500 Genetic Analyzer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An Applied Biosystems sequencing instrument model which performs capillary electrophoresis to sequence DNA and has 8 capillaries, which can run 96 well plates.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001737,precipitation,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001737,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,precipitation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/OMIT_0021725,Escherichia coli Proteins,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OMIT:0021725,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/omit.owl,,,,,,,,,Escherichia coli Proteins,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C80244,Pseudonym,Pseudonym,A fictitious name used when the person performs a particular social role.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Pseudonym,,,,NCIT:C80244,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Pseudonym,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A fictitious name used when the person performs a particular social role.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C12219,"Anatomic Structure, System, or Substance","Anatomic Structures and Systems|Anatomic Structure, System, or Substance","A human biological structure, fluid or other substance; excludes single molecular entities.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Anatomic Structures and Systems|Anatomic Structure, System, or Substance",,,,NCIT:C12219,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,"Anatomic Structure, System, or Substance",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A human biological structure, fluid or other substance; excludes single molecular entities.",,,,,,,,
http://purl.obolibrary.org/obo/OBA_2001015,age of onset of childhood onset asthma,age childhood onset asthma symptoms begin|age at onset of childhood onset asthma,The age at which childhood onset asthma manifestations first appear.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,age childhood onset asthma symptoms begin|age at onset of childhood onset asthma,,,,OBA:2001015,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age of onset of childhood onset asthma,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The age at which childhood onset asthma manifestations first appear.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_26979,organic heterotricyclic compound,,An organic tricyclic compound in which at least one of the rings of the tricyclic skeleton contains one or more heteroatoms.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:26979,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,organic heterotricyclic compound,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An organic tricyclic compound in which at least one of the rings of the tricyclic skeleton contains one or more heteroatoms.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00003934,Egypt,,The 2nd level administrative regions of Egypt are very confusuing and different sources conflicting. Those in gaz.obo are from GeoHive (http://www.xist.org/default1.aspx) and are not fully in agreement with those from the WHO (the file EGY_SALB_table.xls downloaded from http://www.who.int/whosis/database/gis/salb/salb_coding.aspx#DATA).,FALSE,,,,,,,,,,,,,,The 2nd level administrative regions of Egypt are very confusuing and different sources conflicting. Those in gaz.obo are from GeoHive (http://www.xist.org/default1.aspx) and are not fully in agreement with those from the WHO (the file EGY_SALB_table.xls downloaded from http://www.who.int/whosis/database/gis/salb/salb_coding.aspx#DATA).,,,,,,,,,,,,,,,,,,INSDC:country:egypt,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00003934,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Egypt,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C25392,Manufacturer,Manufacturing Labourers|Manufacturing Laborer|Manufacturing|Manufacturer Name|Manufacturer|Maker|Make|MANUFACTURER|MANUF,"A person, enterprise, or entity that produces finished goods.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Manufacturing Labourers|Manufacturing Laborer|Manufacturing|Manufacturer Name|Manufacturer|Maker|Make|MANUFACTURER|MANUF,,,,NCIT:C25392,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Manufacturer|Manufacturer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A person, enterprise, or entity that produces finished goods.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000089,beef chuck short rib,,A cut that is derived from the beef chuck and must include rib 2 through 5.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000089,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef chuck short rib,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A cut that is derived from the beef chuck and must include rib 2 through 5.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100277,sample collected in quarantine,sample collected in quarantine,A data field which describes whether the sample was collected from an individual in quarantine.,FALSE,,,,,,,PCDS:sample_collected_in_quarantine,,,,,,,"PCDS: Whether a sample was collected under quarantine conditions (e.g. self-quarantining, medically isolated, staying at a quarantine hotel) can inform public health measure assessments. Use the picklist provided in the template.",,,,,,,,,,,,,,PCDS: Yes [NCIT:C49488],,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,sample collected in quarantine,sample collected in quarantine slot,,,,GENEPIO:0100277,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,sample collected in quarantine,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes whether the sample was collected from an individual in quarantine.,,PCDS: Whether the sample was collected from an individual in quarantine.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001613,draft GenEpiO epidemiology case record,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001613,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IDO_0000531,,,,,,draft GenEpiO epidemiology case record,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HP_0006510,Chronic pulmonary obstruction,Chronic obstructive pulmonary disease|COPD,"An anomaly that is characterized progressive airflow obstruction that is only partly reversible, inflammation in the airways, and systemic effects or comorbities.",FALSE,,,,,,,,,,,,,,"COPD is usually conceptualized as a disease entity. It is heterogeneous histologically and pathogenically, and conventionally includes emphysema and chronic bronchitis, It is included as a phenotype term as COPD is often annotated as a feature of other diseases.",,,,,,,,,,,,,,,,,,UMLS:C0024117|SNOMEDCT_US:13645005,,,,,,,,,,,,,,,,,,,,,,,HP:0006541,,Chronic obstructive pulmonary disease|COPD,,,,HP:0006510,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Chronic pulmonary obstruction,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An anomaly that is characterized progressive airflow obstruction that is only partly reversible, inflammation in the airways, and systemic effects or comorbities.",,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00002003,fecal material,stool|feces material|faeces material,"An excreta material which is composed primarily of feces, an excreta consisting of waste products expelled from an animal's digestive tract through the anus (or cloaca) during defecation.",FALSE,,,,,,,,,,,,,,"This is distinct from classes such as http://purl.obolibrary.org/obo/UBERON_0001988 in that it refers to the environmental material composed primarily of feces rather than 'just' feces.|ENVO bodily fluid classes differ from UBERON's treatment of bodily fluids. UBERON refers to the substance itself (""S""). We assert that UBERON's classes are the primary compositional component of the terms in ENVO (""S material""). Use of the ENVO terms is typically recommended when you wish to indicate that there may be other materials intermixed with S.",,,,,,,,,,,,,,,,,,SWEETRealm:Drop|SPIRE:Dung|EcoLexicon:drop,,,,,,,,,,,,,,,,,,,,,,,,,stool|feces material|faeces material,,,,ENVO:00002003,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,fecal material,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An excreta material which is composed primarily of feces, an excreta consisting of waste products expelled from an animal's digestive tract through the anus (or cloaca) during defecation.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100700,anatomical region,anatomical_region|anatomical region,A data field which describes a 3D anatomical region in space without well-defined compartmental boundaries.,FALSE,,,,,,,PCDS:anatomical_region,,,,,,,PCDS: This field captures more granular spatial information on a host anatomical part. Select a term from the picklist.,,,,,,,,,,,,,,PCDS: Dorso-lateral region [BSPO:0000080],,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,anatomical_region|anatomical region,anatomical region slot,,,,GENEPIO:0100700,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-1107-9135,2023-05-18T05:09:29.167Z,,,,,,,,,,,,,,,,,,,anatomical region,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes a 3D anatomical region in space without well-defined compartmental boundaries.,,"PCDS: A 3D region in space without well-defined compartmental boundaries; for example, the dorsal region of an ectoderm.",,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0004326,fecal grab,,"A fecal specimen collection method in which feces is obtained by inserting the collection device into the anus of the host, or the feces is captured as it is excreted.",FALSE,,,,,,,,,,,,,,,,,,,,,Emma J Griffiths,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0004326,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135,2022-09-23T11:47:33Z,,,,,,,,,,,,,,,,,,,fecal grab,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A fecal specimen collection method in which feces is obtained by inserting the collection device into the anus of the host, or the feces is captured as it is excreted.",,,,,,,,
http://purl.obolibrary.org/obo/APOLLO_SV_00000280,duration of treatment course,,A duration that measures the temporal interval occupied by a treatment course.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,APOLLO_SV:00000280,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/apollo_sv.owl,,,,,,,,,duration of treatment course,,,,,,,,,,,,,,,,,,,,,,,,,,,,Mathias Brochhausen,,,,A duration that measures the temporal interval occupied by a treatment course.,,,,,,,,
http://purl.obolibrary.org/obo/APOLLO_SV_00000281,number of doses in a treatment course,,The count of the number of doses that are part of a treatment course.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,APOLLO_SV:00000281,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/apollo_sv.owl,,,,,,,,,number of doses in a treatment course,,,,,,,,,,,,,,,,,,,,,,,,,,,,Mathias Brochhausen,,,,The count of the number of doses that are part of a treatment course.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0004370,Abnormality of temperature regulation,Unable to control temperature|Poor temperature regulation|Poor temperature control|Poor regulation of temperature|Poor control of temperature|Inability to regulate temperature|Inability to control temperature|Impaired temperature regulation|Impaired temperature control|Abnormality of temperature regulation,An abnormality of temperature homeostasis.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C1832160|UMLS:C0005904,,,,,,,,,,,,,,,,,,,,,,,,,Unable to control temperature|Poor temperature regulation|Poor temperature control|Poor regulation of temperature|Poor control of temperature|Inability to regulate temperature|Inability to control temperature|Impaired temperature regulation|Impaired temperature control|Abnormality of temperature regulation,,,,HP:0004370,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormality of temperature regulation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An abnormality of temperature homeostasis.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0004372,Reduced consciousness,Reduced consciousness/confusion|Lowered consciousness|Disturbances of consciousness,"Abnormally diminished level of attention, responsiveness, or wakefulness.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0234428|SNOMEDCT_US:3006004,,,,,,,,,,,,,,,,,,,,,,,,,Reduced consciousness/confusion|Lowered consciousness|Disturbances of consciousness,,,,HP:0004372,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Reduced consciousness,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Abnormally diminished level of attention, responsiveness, or wakefulness.",,,,,,,,
http://purl.obolibrary.org/obo/PATO_0001708,1-D extent,1-D size,A size quality inhering in an bearer by virtue of the bearer's extension in one dimension.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,1-D size,,,,PATO:0001708,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/pato.owl,http://purl.oboInOwllibrary.org/oboInOwl/pato#attribute_slim,,,,,,,,1-D extent,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A size quality inhering in an bearer by virtue of the bearer's extension in one dimension.,,,,,,,,
http://purl.obolibrary.org/obo/PATO_0001709,2-D extent,2-D size,A size quality inhering in an bearer by virtue of the bearer's extension in two dimensions.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,2-D size,,,,PATO:0001709,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/pato.owl,http://purl.oboInOwllibrary.org/oboInOwl/pato#attribute_slim,,,,,,,,2-D extent,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A size quality inhering in an bearer by virtue of the bearer's extension in two dimensions.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_03501186,family practice clinic,general practice office|general practice clinic|general medicine clinic|family medicine office|family medicine clinic|family doctor office|family doctor clinic|family care clinic|GP office|GP clinic,A medical clinic which is used to provide family medicine services.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,general practice office|general practice clinic|general medicine clinic|family medicine office|family medicine clinic|family doctor office|family doctor clinic|family care clinic|GP office|GP clinic,,,,ENVO:03501186,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,family practice clinic,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A medical clinic which is used to provide family medicine services.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020975,beef roast (raw),,A raw beef roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020975,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef roast (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef roast.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001809,draft GenEpiO isolate source context,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001809,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,draft GenEpiO isolate source context,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001906,quadratic surface,,"In Euclidean space, quadrics have dimension D = 2, and are known as quadric surfaces.",FALSE,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Quadric,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001906,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,quadratic surface,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"In Euclidean space, quadrics have dimension D = 2, and are known as quadric surfaces.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470109,chemical food preservation process,,"Preservation by use of chemical to destroy, suppress or inhibit undesirable microorganisms or enzyme activity.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0109,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470109,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,chemical food preservation process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Preservation by use of chemical to destroy, suppress or inhibit undesirable microorganisms or enzyme activity.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530132,gite avant,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0132,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530132,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,gite avant,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0002081,musculoskeletal system disorder,musculoskeletal system disorder|musculoskeletal system disease or disorder|musculoskeletal system disease|musculoskeletal disease|disorder of musculoskeletal system|disease or disorder of musculoskeletal system|disease of musculoskeletal system,A disease involving the musculoskeletal system.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0026857|SCTID:928000|NCIT:C107377|MESH:D009140|MEDGEN:6471|ICD9:729.99|EFO:0009676|DOID:17,,,,,,,,,,,,,,,,,,,,,,,,,musculoskeletal system disorder|musculoskeletal system disease or disorder|musculoskeletal system disease|musculoskeletal disease|disorder of musculoskeletal system|disease or disorder of musculoskeletal system|disease of musculoskeletal system,,,,MONDO:0002081,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#rare_grouping|http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar|http://purl.oboInOwllibrary.org/oboInOwl/mondo#harrisons_view,,,,,,,,musculoskeletal system disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A disease involving the musculoskeletal system.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_03501214,locker,locking cupboard|locking cabinet|lockable cupboard|lockable cabinet,A manufactured product which is a storage compartment with a lock.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,locking cupboard|locking cabinet|lockable cupboard|lockable cabinet,,,,ENVO:03501214,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,locker,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A manufactured product which is a storage compartment with a lock.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530136,cuisse,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0136,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530136,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,cuisse,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490153,"paperboard container, plastic coated",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0153,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490153,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"paperboard container, plastic coated",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000019,"beef top round steak (cap off, raw)",,A raw beef top round steak in which the top cap portion has been separated off.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000019,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"beef top round steak (cap off, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef top round steak in which the top cap portion has been separated off.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0016402,mesocolic lymph node,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Mesocolic_lymph_nodes|FMA:300965,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0016402,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,mesocolic lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0016401,pancreaticoduodenal lymph node,pancreaticoduodenal node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SCTID:281152007|FMA:16623,,,,,,,,,,,,,,,,,,,,,,,,,pancreaticoduodenal node,,,,UBERON:0016401,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,pancreaticoduodenal lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002173,travel destination specification,,A value specification which describes the travel destination a given human has travelled to on a particular trip.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002173,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0001783,,,,,,travel destination specification,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A value specification which describes the travel destination a given human has travelled to on a particular trip.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001727,obsolete: swab - meat,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000229,,,,,,,,,,,,,,,,,,,GENEPIO:0001727,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: swab - meat,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00005277,"populated place, Dominican Republic",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00005277,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Dominican Republic",http://purl.obolibrary.org/obo/GAZ_00003952,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_28864,tobramycin,,"A amino cyclitol glycoside that is kanamycin B lacking the 3-hydroxy substituent from the 2,6-diaminoglucose ring.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:9610|CHEBI:45933|CHEBI:19849,,,,,,CHEBI:28864,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,tobramycin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A amino cyclitol glycoside that is kanamycin B lacking the 3-hydroxy substituent from the 2,6-diaminoglucose ring.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_13386,gastrointestinal anthrax,,"An anthrax disease that results in infection located in mucosa of gastrointestinal tract, has_material_basis_in Bacillus anthracis, which is transmitted by ingestion of anthrax-infected meat. The infection has symptom lesions, has symptom vomiting of blood, has symptom severe diarrhea, has symptom loss of appetite.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:13386,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,gastrointestinal anthrax,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An anthrax disease that results in infection located in mucosa of gastrointestinal tract, has_material_basis_in Bacillus anthracis, which is transmitted by ingestion of anthrax-infected meat. The infection has symptom lesions, has symptom vomiting of blood, has symptom severe diarrhea, has symptom loss of appetite.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001771,contig NG99,,The NG99 length is the same as the N99 length except that the length of the reference genome is used in the calculation rather than the sum of assembly contig lengths.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001771,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,,,,,,,contig NG99,,,,,Assembly QC,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,The NG99 length is the same as the N99 length except that the length of the reference genome is used in the calculation rather than the sum of assembly contig lengths.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00005631,"populated place, Central African Republic",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00005631,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Central African Republic",http://purl.obolibrary.org/obo/GAZ_00001089,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C85173,Sudden Infant Death Syndrome,sudden infant death syndrome|crib death|Sudden Infant Death Syndrome|SIDS,"Unexpected death in infancy which remains unexplained following autopsy, review of the medical history, and investigation of the death circumstances and death scene.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,sudden infant death syndrome|crib death|Sudden Infant Death Syndrome|SIDS,,,,NCIT:C85173,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Sudden Infant Death Syndrome,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Unexpected death in infancy which remains unexplained following autopsy, review of the medical history, and investigation of the death circumstances and death scene.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_134742,delamanid,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:134742,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,delamanid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03480015,packed with aerosol propellant,,Packed with a gas that is liquified under pressure and that upon release of the pressure propels and aerates the food product. See 21 CFR 173.345 and 173.360 for substances used.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=K0015,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03480015,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,packed with aerosol propellant,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Packed with a gas that is liquified under pressure and that upon release of the pressure propels and aerates the food product. See 21 CFR 173.345 and 173.360 for substances used.,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_2157,Archaea,,The Archaea constitute a domain and kingdom of single-celled microorganisms,FALSE,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Archaea,,,,,Archaea,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:2157,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Archaea,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,The Archaea constitute a domain and kingdom of single-celled microorganisms,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00000591,Kingdom of Spain,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,INSDC:country:spain,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00000591,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Kingdom of Spain,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00000590,Oceans and Seas,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00000590,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Oceans and Seas,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,[Oceans and Seas],,,,
http://purl.obolibrary.org/obo/UBERON_0007794,secretion of serous gland,serous fluid,Any fluid produced by a serous gland.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Serous_fluid,,,,,,,,,,,,,,,,,,,,,,,,serous fluid,serous gland fluid|serosal fluid,,,,UBERON:0007794,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,secretion of serous gland,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any fluid produced by a serous gland.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_15379,dioxygen,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:7860|CHEBI:44742|CHEBI:30491|CHEBI:29097|CHEBI:25366|CHEBI:23833|CHEBI:13416|CHEBI:10745,,,,,,CHEBI:15379,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,dioxygen,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_35362,hydrazide,,Compounds derived from oxoacids R<small><sub><em>k</em></sub></small>E(=O)<small><sub><em>l</em></sub></small>(OH)<small><sub><em>m</em></sub></small> (<em>l</em> ≠ 0) by replacing ‒OH  by ‒NRNR<small><sub>2</sub></small> (R groups are commonly H). (IUPAC).,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:35362,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,hydrazide,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Compounds derived from oxoacids R<small><sub><em>k</em></sub></small>E(=O)<small><sub><em>l</em></sub></small>(OH)<small><sub><em>m</em></sub></small> (<em>l</em> ≠ 0) by replacing ‒OH  by ‒NRNR<small><sub>2</sub></small> (R groups are commonly H). (IUPAC).,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_8269,Pleuromutilin,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:8269,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,Pleuromutilin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_51689,enone,,"An α,β-unsaturated ketone of general formula R<small><sup>1</small></sup>R<small><sup>2</small></sup>C=CR<small><sup>3</small></sup>‒C(=O)R<small><sup>4</small></sup> (R<small><sup>4</small></sup> ≠ H) in which the C=O function is conjugated to a C=C double bond at the α,β position.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:51689,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,enone,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An α,β-unsaturated ketone of general formula R<small><sup>1</small></sup>R<small><sup>2</small></sup>C=CR<small><sup>3</small></sup>‒C(=O)R<small><sup>4</small></sup> (R<small><sup>4</small></sup> ≠ H) in which the C=O function is conjugated to a C=C double bond at the α,β position.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102133,viral clade,,PCDS: Provide the clade of the virus.,FALSE,,,,,,,PCDS:viral_clade,,,,,,,PCDS: Provide the clade of the virus.,,,,,,,,,,,,,,PCDS: Measles virus Clade D,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102133,,,,,,,,,,,,,,2026-04-13T17:16:47.336Z,,,,,,,,,,,,,,,,,,,viral clade,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PCDS: A grouping that includes a common ancestor and all the descendants (living and extinct) of that ancestor.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001663,swimming / wading,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001663,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,swimming / wading,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/BFO_0000024,fiat object,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,BFO:0000024,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,fiat object part|fiat object,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C192506,Patient Residence Postal Code,Postal Code of Domicile|Patient Residence Postal Code,The postal code of the patient's residence.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Postal Code of Domicile|Patient Residence Postal Code,,,,NCIT:C192506,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Patient Residence Postal Code,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The postal code of the patient's residence.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C192505,Intervention Facility Postal Code,Intervention Facility Postal Code,The postal code of the facility where the interventional procedure was performed.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Intervention Facility Postal Code,,,,NCIT:C192505,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Intervention Facility Postal Code,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The postal code of the facility where the interventional procedure was performed.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C192504,Encounter Facility Postal Code,Encounter Facility Postal Code,The postal code of the facility where the encounter occurred.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Encounter Facility Postal Code,,,,NCIT:C192504,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Encounter Facility Postal Code,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The postal code of the facility where the encounter occurred.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001767,3 - improved high quality draft,,"Improved high quality draft: in which data is either reviewed by people or machines to some extent to indicate that most of the genetic data is assembled correctly, but some errors may still be present.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001767,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,3 - improved high quality draft,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"Improved high quality draft: in which data is either reviewed by people or machines to some extent to indicate that most of the genetic data is assembled correctly, but some errors may still be present.",,,,,,,,
http://purl.obolibrary.org/obo/APOLLO_SV_00000021,count of simulated resistant population,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,APOLLO_SV:00000021,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/apollo_sv.owl,,,,,,,,,count of simulated resistant population,,,,,,,,,,,,,,,,,,,,,,,,,,,,Mathias Brochhausen,,,,,,,,,,,,
http://purl.obolibrary.org/obo/APOLLO_SV_00000022,count of simulated population,,The count of (simulated organisms) in a simulated population.,FALSE,,,,,,,,,,,,,,"MW: I know this causes problems with our set-theoretic definition.  Unfortunately the compartmental models produce fractional counts at each of their time steps, including the final step.  

Any ideas?  I’ve considered and rejected allowing individual organisms to be fractional.  Perhaps if we just replace the term “cardinality” in the definition with ‘computed size’",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,APOLLO_SV:00000022,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/apollo_sv.owl,,,,,,,,,count of simulated population,,,,,,,,,,,,,,,,,,,,,,,,,,,,Mathias Brochhausen,,,,The count of (simulated organisms) in a simulated population.,,,,,,,,
http://purl.obolibrary.org/obo/APOLLO_SV_00000020,count of simulated contagious population,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,APOLLO_SV:00000020,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/apollo_sv.owl,,,,,,,,,count of simulated contagious population,,,,,,,,,,,,,,,,,,,,,,,,,,,,Mathias Brochhausen,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C124600,Early Intrauterine Death,Early Intrauterine Death|Early IUD|EARLY INTRAUTERINE DEATH,A death of the embryo occurring inside the uterus.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Early Intrauterine Death|Early IUD|EARLY INTRAUTERINE DEATH,,,,NCIT:C124600,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Early Intrauterine Death,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A death of the embryo occurring inside the uterus.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000149,library preparation kit version,,The version identifier of a packaged kit tailored for specific sequencing workflows.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000149,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,library preparation kit version,,,,,Sequencing,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,The version identifier of a packaged kit tailored for specific sequencing workflows.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_36834,3-hydroxy steroid,,Any hydroxy steroid carrying a hydroxy group at position 3.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:36834,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,3-hydroxy steroid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any hydroxy steroid carrying a hydroxy group at position 3.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001465,isolate history record,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001465,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,isolate history record,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/IDO_0000511,infected population,,An organism population whose members have an infection.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,IDO:0000511,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ido.owl,,,,,,,,,infected population,,,,,,,,,,,,,,,,,,,,,,,,,,,,Lindsay Cowell|Alexander Diehl|Albert Goldfain,,,,An organism population whose members have an infection.,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_7770008,disease by etiologic mechanism,,"A grouping class for human diseases classified by their etiologic mechanism, encompassing primarily intrinsic (genetic, genomic), primarily extrinsic (e.g., infections, toxins, radiation), and complex multifactorial (e.g. nutritional) causes.",FALSE,,,,,,,,,,,,,,This term is intended solely for classification purposes and should not be used for direct data annotation.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MONDO:7770008,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,,,,,,,,,disease by etiologic mechanism,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A grouping class for human diseases classified by their etiologic mechanism, encompassing primarily intrinsic (genetic, genomic), primarily extrinsic (e.g., infections, toxins, radiation), and complex multifactorial (e.g. nutritional) causes.",,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00051031,Australasian Mediterranean Sea,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00051031,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Australasian Mediterranean Sea,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0080000,muscular disease,,A musculoskeletal system disease that affects the muscles.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0080000,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,muscular disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A musculoskeletal system disease that affects the muscles.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0080001,bone disease,,A connective tissue disease that affects the structure or development of bone or causes an impairment of normal bone function.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0080001,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,bone disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A connective tissue disease that affects the structure or development of bone or causes an impairment of normal bone function.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03307315,fish fillet (smoked),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://bioregistry.io/reference/siren:F7315,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03307315,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,fish fillet (smoked),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001098,tuberculosis infection anatomical site,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001098,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,tuberculosis infection anatomical site,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00005160,"populated place, French Guiana",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,INSDC:country:french guiana,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00005160,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, French Guiana",http://purl.obolibrary.org/obo/GAZ_00002516,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00005165,"populated place, Honduras",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00005165,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Honduras",http://purl.obolibrary.org/obo/GAZ_00002894,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001686,E. coli serotype specification,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001686,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,E. coli serotype specification,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490390,polyester resin container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0390,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490390,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,polyester resin container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001947,ChIP method,,Chromatin immunoprecipitation,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI SRA: ChIP,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001947,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ChIP method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Chromatin immunoprecipitation,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02022275,"turkey breast (bone-in, raw)",,A raw bone-in turkey breast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02022275,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"turkey breast (bone-in, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw bone-in turkey breast.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530028,short plate,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0028,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530028,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,short plate,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_1055536,Escherichia coli O103,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,Escherichia coli O103,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:1055536,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Escherichia coli O103,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_15369,actinomycin,,A large group of antibiotics isolated from various species of <em>Streptomyces</em> and characterised by having a substituted phenoxazine ring linked to two cyclic heterodetic peptides.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:2445|CHEBI:22220|CHEBI:13723,,,,,,CHEBI:15369,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,actinomycin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A large group of antibiotics isolated from various species of <em>Streptomyces</em> and characterised by having a substituted phenoxazine ring linked to two cyclic heterodetic peptides.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0002794,reusable patient gown,,A patient gown intended to be reused after being laundered.,FALSE,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Patient_gown,,,,,reusable patient gown,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0002794,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,reusable patient gown,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://orcid.org/0000-0002-8844-9165,,,https://github.com/obi-ontology/obi/issues/1193,A patient gown intended to be reused after being laundered.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C25174,Father,Father|FATHER,A male parent.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Father|FATHER,,,,NCIT:C25174,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Father,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A male parent.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470159,pasteurization by heat before filling,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0159,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470159,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pasteurization by heat before filling,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100458,progeny isolate id,progeny_isolate_ID|progeny isolate identifier|progeny isolate ID,A data field which describes the identifier assigned to a progenitor isolate derived from an isolate that was directly obtained from a sample.,FALSE,,,,,,,PCDS:progeny_isolate_id,,,,,,,"PCDS: If your sequence data pertains to progeny of an original isolate, provide the progeny_isolate_ID.",,,,,,,,,,,,,,PCDS: SUB_ON_1526,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,progeny_isolate_ID|progeny isolate identifier|progeny isolate ID,progeny isolate identifier slot|progeny isolate identifier field|progeny isolate ID slot,,,,GENEPIO:0100458,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,progeny isolate id,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the identifier assigned to a progenitor isolate derived from an isolate that was directly obtained from a sample.,,PCDS: The identifier assigned to a progenitor isolate derived from an isolate that was directly obtained from a sample.,,,,,,
http://purl.obolibrary.org/obo/CHEBI_51958,organic polycyclic compound,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:51958,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,organic polycyclic compound,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002115,sputum collection,,The process of collecting a portion of urine from an organism.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002115,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,sputum collection,,,,,,,,,,,,,,,,,,,,,,,,,,,,Emma Griffiths,,,,The process of collecting a portion of urine from an organism.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490351,paper-aluminium foil-plastic wrapper,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0351,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490351,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,paper-aluminium foil-plastic wrapper,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490336,kraft or brown paper container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0336,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490336,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,kraft or brown paper container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_194135,"9-fluoro-3-methyl-10-(4-methylpiperazin-1-yl)-7-oxo-2,3-dihydro-7H-[1,4]oxazino[2,3,4-ij]quinoline-6-carboxylic acid",,"An oxazinoquinoline that is 2,3-dihydro-7<em>H</em>-[1,4]oxazino[2,3,4-<em>ij</em>]quinolin-7-one substituted by methyl, carboxy, fluoro, and 4-methylpiperazin-1-yl groups at positions 3, 6, 9, and 10, respectively.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:194135,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,"9-fluoro-3-methyl-10-(4-methylpiperazin-1-yl)-7-oxo-2,3-dihydro-7H-[1,4]oxazino[2,3,4-ij]quinoline-6-carboxylic acid",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An oxazinoquinoline that is 2,3-dihydro-7<em>H</em>-[1,4]oxazino[2,3,4-<em>ij</em>]quinolin-7-one substituted by methyl, carboxy, fluoro, and 4-methylpiperazin-1-yl groups at positions 3, 6, 9, and 10, respectively.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000274,lamb breast,,A lamb minor primal cut that is the lower chest cavity underneath the rack that includes ribs 5-8.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000274,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lamb breast,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A lamb minor primal cut that is the lower chest cavity underneath the rack that includes ribs 5-8.,,,,,,,,
http://purl.obolibrary.org/obo/UO_1000197,liter per kilogram based unit,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:1000197,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,liter per kilogram based unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UO_1000193,purity percentage based unit,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:1000193,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,purity percentage based unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UO_1000196,pH based unit,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:1000196,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,pH based unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UO_1000194,confluence percentage based unit,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:1000194,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,confluence percentage based unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UO_1000195,degree Fahrenheit based unit,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:1000195,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,degree Fahrenheit based unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://semanticscience.org/resource/SIO_000614,attribute,,An attribute is a characteristic of some entity.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,resource:SIO_000614,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gsso.owl,,,,,,,,,attribute,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An attribute is a characteristic of some entity.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_12385,shigellosis,,"A primary bacterial infectious disease that results_in infection located_in epithelium of colon, has_material_basis_in Shigella boydii, has_material_basis_in Shigella dysenteriae, has_material_basis_in Shigella flexneri, or has_material_basis_in Shigella sonnei, which produce toxins that can attack the lining of the large intestine, causing swelling, ulcers on the intestinal wall, and bloody diarrhea. The bacteria are transmitted_by ingestion of food and water contaminated with feces.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:12385,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,shigellosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A primary bacterial infectious disease that results_in infection located_in epithelium of colon, has_material_basis_in Shigella boydii, has_material_basis_in Shigella dysenteriae, has_material_basis_in Shigella flexneri, or has_material_basis_in Shigella sonnei, which produce toxins that can attack the lining of the large intestine, causing swelling, ulcers on the intestinal wall, and bloody diarrhea. The bacteria are transmitted_by ingestion of food and water contaminated with feces.",,,,,,,,
http://purl.obolibrary.org/obo/HP_0000492,Abnormal eyelid morphology,Abnormality of the eyelids|Abnormality of the eyelid,An abnormality of the eyelids.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4021803,,,,,,,,,,,,,,,,,,,,,,,HP:0000285,,Abnormality of the eyelids|Abnormality of the eyelid,,,,HP:0000492,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,http://purl.oboInOwllibrary.org/oboInOwl/hp#hposlim_core,,,,,,,,Abnormal eyelid morphology,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An abnormality of the eyelids.,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0024882,secondary neoplasm,secondary tumour|secondary tumor|secondary neoplasm,"A neoplasm that arises from a pre-existing lower grade lesion, or as a result of a primary lesion that has spread to secondary sites, or due to a complication of a cancer treatment.",FALSE,,,,,,,,,,,,,,"Note that we currently treat secondary neoplasms as being neoplastic diseases that are derived from neoplasm; classes such as 'neoplasm', 'carcinoma' are implicitly primary. This may change in future.",,,,,,,,,,,,,,,,,,UMLS:C5848363|NCIT:C36255|MEDGEN:1851572,,,,,,,,,,,,,,,,,,,,,,,,,secondary tumour|secondary tumor|secondary neoplasm,,,,MONDO:0024882,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,secondary neoplasm,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A neoplasm that arises from a pre-existing lower grade lesion, or as a result of a primary lesion that has spread to secondary sites, or due to a complication of a cancer treatment.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020900,piece of cow (raw),,A raw piece of beef.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://bioregistry.io/reference/siren:F9737,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020900,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of cow (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw piece of beef.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020233,chicken breast (with skin),,A chicken breast that contains skin.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020233,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,chicken breast (with skin),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A chicken breast that contains skin.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000450,bison top round steak (raw),,A raw bison top round steak.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000450,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,bison top round steak (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw bison top round steak.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000113,specimen category,,"Specimen category is a categorical variable that broadly indicates the source of a specimen in order for data processing systems like NCBI's biosample submission portal to anticipate other fields related to the source. Currently this distinguishes between ""clinical or host associated"" specimens and ""environmental/food or other pathogen"" specimens.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000113,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,specimen category,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"Specimen category is a categorical variable that broadly indicates the source of a specimen in order for data processing systems like NCBI's biosample submission portal to anticipate other fields related to the source. Currently this distinguishes between ""clinical or host associated"" specimens and ""environmental/food or other pathogen"" specimens.",,,,,,,,
http://purl.obolibrary.org/obo/TRANS_0000008,droplet spread,,"Droplet spread transmission is a direct transmission process during which the pathogen is transmitted from a reservoir, source or host to another host by spray of aerosols over a short distance, spray from sneezing, coughing or talking.",FALSE,,,,,,,,,,,,,,,,,,,,,https://www.ebi.ac.uk/ols/ontologies/trans,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,TRANS:0000008,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,droplet spread,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Droplet spread transmission is a direct transmission process during which the pathogen is transmitted from a reservoir, source or host to another host by spray of aerosols over a short distance, spray from sneezing, coughing or talking.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_24866,salt,,A salt is an assembly of cations and anions.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:24866,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,salt,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A salt is an assembly of cations and anions.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00003862,dairy,,"A dairy is a building in which animal milk is harvested and, optionally, processed for human consumption.",FALSE,,,,,,,,,,,,,,"'Terminology differs between countries. For example, in the United States, the entire dairy farm is commonly called a ""dairy."" The building or farm area where milk is harvested from the cow is often called a ""milking parlor"" or ""parlor."" The farm area where milk is stored in bulk tanks is known as the farm's ""milk house."" Milk is then hauled (usually by truck) to a ""dairy plant,"" also referred to as a ""dairy"", where raw milk is further processed and prepared for commercial sale of dairy products. In New Zealand, farm areas for milk harvesting are also called ""milking parlours"", and are historically known as ""milking sheds.""' https://en.wikipedia.org/wiki/Dairy",,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Dairy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00003862,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,dairy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A dairy is a building in which animal milk is harvested and, optionally, processed for human consumption.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000190,beef brisket (raw),,A raw beef brisket.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000190,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef brisket (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef brisket.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_2149,urogenital tuberculosis,,An extrapulmonary tuberculosis that is located_in urogenital system.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:2149,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,urogenital tuberculosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An extrapulmonary tuberculosis that is located_in urogenital system.,,,,,,,,
http://www.ebi.ac.uk/efo/EFO_0005112,gestational age,,"The age of the conceptus, beginning from the time of FERTILIZATION. In clinical obstetrics, the gestational age is often estimated as the time from the last day of the last MENSTRUATION which is about 2 weeks before OVULATION and fertilization.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MESH:D005865,,,,,,,,,,,,,,,,,,,,,,,,,,,,,efo:EFO_0005112,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,gestational age,,,,,,,,,,,,,,,,,,,,,,,,,,,,Dani Welter,,,,"The age of the conceptus, beginning from the time of FERTILIZATION. In clinical obstetrics, the gestational age is often estimated as the time from the last day of the last MENSTRUATION which is about 2 weeks before OVULATION and fertilization.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100022,obsolete: research strategy,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100022,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: research strategy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0100003,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_33263,diatomic oxygen,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:33263,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,diatomic oxygen,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_376725,Escherichia coli O103:H2,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,Escherichia coli O103:H2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:376725,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Escherichia coli O103:H2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_33704,alpha-amino acid,,An amino acid in which the amino group is located on the carbon atom at the position α to the carboxy group.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:2642|CHEBI:22442|CHEBI:13779|CHEBI:10208,,,,,,CHEBI:33704,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,alpha-amino acid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An amino acid in which the amino group is located on the carbon atom at the position α to the carboxy group.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001998,decimal quantity unit,,A multiplier in the decimal number system that has been applied to an accompanying number or set of numbers often to simplfy their appearance.  Numbers described by multipliers may have lost significant digits through rounding or trimming.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001998,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,decimal quantity unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A multiplier in the decimal number system that has been applied to an accompanying number or set of numbers often to simplfy their appearance.  Numbers described by multipliers may have lost significant digits through rounding or trimming.,,,,,,,,
http://purl.obolibrary.org/obo/ARO_3004304,susceptible dose dependent antimicrobial phenotype,sensitive - dose dependent|Sensitive dose dependent antimicrobial phenotype|SDD,"A bacterial strain is said to be susceptible-dose dependent (SDD) to a given antibiotic when growth is inhibited with a high likelihood of therapeutic success, but when multiple approved dosing options exist. When a higher or more frequent dose is used, the predicted therapeutic result is the same as for susceptible individuals.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SSD,,sensitive - dose dependent|Sensitive dose dependent antimicrobial phenotype|SDD,,,,ARO:3004304,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/aro.owl,,,,,,,,,susceptible dose dependent antimicrobial phenotype,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A bacterial strain is said to be susceptible-dose dependent (SDD) to a given antibiotic when growth is inhibited with a high likelihood of therapeutic success, but when multiple approved dosing options exist. When a higher or more frequent dose is used, the predicted therapeutic result is the same as for susceptible individuals.",,,,susceptible - dose dependent,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002061,GM-NEG,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002061,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GM-NEG,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100150,MGI DNBSEQ-G50,,A DNA sequencer manufactured by the MGI corporation with an output capacity of 10～150 GB per run and enables different read lengths.,FALSE,,,,,,,DNBSEQ-G50,,,,,,,,,,,,,,https://global-mgitech.com/seqall/dnbseq-g50/,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100150,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,MGI DNBSEQ-G50,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A DNA sequencer manufactured by the MGI corporation with an output capacity of 10～150 GB per run and enables different read lengths.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0060057,gluten allergy,,"A food allergy that develops from an immune reaction to eating gluten, a protein found in wheat, barley, rye and triticale and that is characterized by stomach cramping, diarrhea and gastrointestinal upset and is unrelated to the gluten intolerance.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0060057,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,gluten allergy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A food allergy that develops from an immune reaction to eating gluten, a protein found in wheat, barley, rye and triticale and that is characterized by stomach cramping, diarrhea and gastrointestinal upset and is unrelated to the gluten intolerance.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001421,obsolete: sample datum,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001421,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: sample datum,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001657,draft NCBI BioSample geo_loc_name model,,"Geographical origin of the sample; use the appropriate name from this list http://www.insdc.org/documents/country-qualifier-vocabulary. Use a colon to separate the country or ocean from more detailed information about the location, eg ""Canada: Vancouver"" or ""Germany: halfway down Zugspitze, Alps""",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001657,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/OBI_0100051,,,,,,draft NCBI BioSample geo_loc_name model,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"Geographical origin of the sample; use the appropriate name from this list http://www.insdc.org/documents/country-qualifier-vocabulary. Use a colon to separate the country or ocean from more detailed information about the location, eg ""Canada: Vancouver"" or ""Germany: halfway down Zugspitze, Alps""",,,"order:
NCIT:C25464 # country
ENVO:00000005 # state / province etc.",,,,,
http://purl.obolibrary.org/obo/MONDO_0005876,Nidovirales infectious disease,Nidovirales disease or disorder|Nidovirales caused disease or disorder,Infections with viruses of the order nidovirales. The concept includes arterivirus infections and coronaviridae infections.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0969753|MESH:D030341|MEDGEN:197455,,,,,,,,,,,,,,,,,,,,,,,,,Nidovirales disease or disorder|Nidovirales caused disease or disorder,,,,MONDO:0005876,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,,,,,,,,,Nidovirales infectious disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Infections with viruses of the order nidovirales. The concept includes arterivirus infections and coronaviridae infections.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000123,infection aquired during travel,,Infection aquired during travel is a boolean datum indicating a diagnosis of a traveller's infection during a given trip.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,infection aquired during travel,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,Infection aquired during travel is a boolean datum indicating a diagnosis of a traveller's infection during a given trip.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00002547,Province (Argentina),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00002547,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Province (Argentina),http://purl.obolibrary.org/obo/GAZ_00002928,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_8782,Aves,,,FALSE,,,,,,,birds,,,,,,,,,,,,,,,,,,,Aves,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:8782,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Aves,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100009,longitudinal surveillance strategy,repeat sampling of individuals,"A priority surveillance strategy in which subsets of a defined population can be identified who are, have been, or in the future may be exposed or not exposed - or exposed in different degrees - to a disease of interest and are selected to under go repeat sampling over a defined period of time.",FALSE,,,,,,,Longitudinal surveillance (repeat sampling of individuals),,,,,,,,,,,,,,"Cohort Study"" (p.50) in Porta, M. (2014). A Dictionary of Epidemiology (6th ed.). Oxford University Press, Incorporated.",,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,repeat sampling of individuals,,,,GENEPIO:0100009,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,longitudinal surveillance strategy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A priority surveillance strategy in which subsets of a defined population can be identified who are, have been, or in the future may be exposed or not exposed - or exposed in different degrees - to a disease of interest and are selected to under go repeat sampling over a defined period of time.",,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0021666,ear infection,otitis|Ear infection,"A viral or bacterial infection that affects the external, middle, or inner ear. It may follow an upper respiratory infection. Signs and symptoms include pain, ear discharge, ear fullness, hearing loss, vertigo, nausea, and vomiting.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0699744|NCIT:C27193|MESH:D010031|MEDGEN:147064,,,,,,,,,,,,,,,,,,,,,,,,,otitis|Ear infection,,,,MONDO:0021666,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,ear infection,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A viral or bacterial infection that affects the external, middle, or inner ear. It may follow an upper respiratory infection. Signs and symptoms include pain, ear discharge, ear fullness, hearing loss, vertigo, nausea, and vomiting.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000214,beef ribeye petite roast (raw),,A raw beef ribeye petite roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000214,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef ribeye petite roast (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef ribeye petite roast.,,,,,,,,
http://purl.obolibrary.org/obo/ECTO_1000021,exposure to construction,construction exposure,A exposure event involving the interaction of an exposure receptor to construction.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,construction exposure,,,,ECTO:1000021,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ecto.owl,,,,,,,,,exposure to construction,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A exposure event involving the interaction of an exposure receptor to construction.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C15329,Surgical Procedure,"surgery|Type of Surgery|Surgically|Surgical Procedures|Surgical Procedure|Surgical Interventions|Surgical Intervention|Surgical|Surgery, NOS|Surgery Type|Surgery|SURGERY|Operation","A diagnostic or treatment procedure performed by manual and/or instrumental means, often involving an incision and the removal or replacement of a diseased organ or tissue; of or relating to or involving or used in surgery or requiring or amenable to treatment by surgery.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"surgery|Type of Surgery|Surgically|Surgical Procedures|Surgical Procedure|Surgical Interventions|Surgical Intervention|Surgical|Surgery, NOS|Surgery Type|Surgery|SURGERY|Operation",,,,NCIT:C15329,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Surgical Procedure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A diagnostic or treatment procedure performed by manual and/or instrumental means, often involving an incision and the removal or replacement of a diseased organ or tissue; of or relating to or involving or used in surgery or requiring or amenable to treatment by surgery.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00004337,animal sub-primal cut,,A smaller cut of meat that is obtained from the larger primal cut of an animal.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00004337,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,animal sub-primal cut,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A smaller cut of meat that is obtained from the larger primal cut of an animal.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100455,strain,strain,A data field which describes the strain identifier.,FALSE,,,,,,,PCDS:strain,,,,,,,PCDS: Provide the strain of the isolate.,,,,,,,,,,,,,,PCDS: K12,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,strain,strain slot,,,,GENEPIO:0100455,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,strain,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the strain identifier.,,PCDS: The strain identifier.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002169,test drug maximum concentration specification,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A datum specification for the maximum concentration of a drug applied during an an assay.,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002169,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,test drug maximum concentration specification,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0002100,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001582,monoisolate sample scope,,"A monoisolate sample scope involves specimens from a single animal, cultured cell-line, inbred population, or possibly a heterogeneous population when a single genome assembly is generated from a pooled sample because multiple individuals are needed to collect enough material and an inbred line is not available; however, this situation is not preferred.",FALSE,,,,,,,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/books/NBK54364/,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001582,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,monoisolate sample scope,,,,,,,monoisolate,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"A monoisolate sample scope involves specimens from a single animal, cultured cell-line, inbred population, or possibly a heterogeneous population when a single genome assembly is generated from a pooled sample because multiple individuals are needed to collect enough material and an inbred line is not available; however, this situation is not preferred.",,,,monoisolate,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001950,Hybrid Selection method,,Selection by hybridization in array or solution.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI SRA: Hybrid Selection,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001950,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Hybrid Selection method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Selection by hybridization in array or solution.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000984,grocery store,,A food shop in which food products are the primary offer for sale or trade.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01000984,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,grocery store,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A food shop in which food products are the primary offer for sale or trade.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03500056,edible casing,,"A very thin edible covering, either natural or some form of a synthetic, that is used to enclose ground meat and other ingredients.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=N0056,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03500056,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,edible casing,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A very thin edible covering, either natural or some form of a synthetic, that is used to enclose ground meat and other ingredients.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001762,micromole per litre,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001762,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,micromole per litre,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001476,r1 fastq filename,r1_fastq_filename|r1 fastq filename,A data field which describes the user-specified filename of the read 1 (r1) FASTQ file.,FALSE,,,,,,,PCDS:r1_fastq_filename,,,,,,,PCDS: Provide the r1 FASTQ filename.,,,,,,,,,,,,,,PCDS: ABC123_S1_L001_R1_001.fastq.gz,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,r1_fastq_filename|r1 fastq filename,r1 fastq filename slot,,,,GENEPIO:0001476,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,r1 fastq filename,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the user-specified filename of the read 1 (r1) FASTQ file.,,PCDS: The user-specified filename of the r1 FASTQ file.,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020063,piece of avian animal meat (raw),,A raw piece of avian animal meat.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020063,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of avian animal meat (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw piece of avian animal meat.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_161680,aztreonam,,"A synthetic monocyclic β-lactam antibiotic (monobactam), used primarily to treat infections caused by Gram-negative bacteria. It inhibits mucopeptide synthesis in the bacterial cell wall, thereby blocking peptidoglycan crosslinking.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:41008|CHEBI:2960,,,,,,CHEBI:161680,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,aztreonam,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A synthetic monocyclic β-lactam antibiotic (monobactam), used primarily to treat infections caused by Gram-negative bacteria. It inhibits mucopeptide synthesis in the bacterial cell wall, thereby blocking peptidoglycan crosslinking.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000447,bison top round,,A bison cut that comes from the inside of the rear leg.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000447,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,bison top round,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A bison cut that comes from the inside of the rear leg.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C84328,Rack,Rack,A framework for holding objects.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Rack,,,,NCIT:C84328,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Rack,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A framework for holding objects.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00003864,bakery,,"A bakery is a building in which raw flour-based food is baked in an oven to produce food products such as bread, cakes, pastries, and pies. These products are often sold from the bakery itself.",FALSE,,,,,,,,,,,,,,A bakery is a food processing building and a 'food shop' at the same time. This needs to be resolved.,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Bakery,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00003864,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,bakery,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A bakery is a building in which raw flour-based food is baked in an oven to produce food products such as bread, cakes, pastries, and pies. These products are often sold from the bakery itself.",,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_10092,Mus musculus domesticus,,,FALSE,,,,,,,western European house mouse,,,,,,,,,,,,,,,,,,,Mus musculus domesticus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:10092,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Mus musculus domesticus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0000429,autosomal genetic disease,autosomal inherited disorder|autosomal inherited disease|autosomal hereditary disorder,A monogenic disease that is has material basis in a mutation in a single gene on one of the non-sex chromosomes.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0265384|SCTID:1899006|MEDGEN:539205|ICD9:758.5|DOID:0050739,,,,,,,,,,,,,,,,,,,,,,,,,autosomal inherited disorder|autosomal inherited disease|autosomal hereditary disorder,,,,MONDO:0000429,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,autosomal genetic disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A monogenic disease that is has material basis in a mutation in a single gene on one of the non-sex chromosomes.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000044,beef eye of round steak (raw),,A raw beef eye of round steak.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000044,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef eye of round steak (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef eye of round steak.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03430150,"whole, natural shape",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=E0150,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03430150,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"whole, natural shape",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490100,food packaging,,"A food contact material which encloses the food and can be in the type of a container, packaging or wrapping.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0100,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490100,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food packaging,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A food contact material which encloses the food and can be in the type of a container, packaging or wrapping.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001452,sequencing instrument,sequencing_instrument|sequencing instrument,A data field which describes the model of the sequencing instrument used.,FALSE,,,,,,,PCDS:sequencing_instrument,,,,,,,PCDS: Select the sequencing instrument from the pick list.,,,,,,,,,,,,,,PCDS: Oxford Nanopore MinION,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,sequencing_instrument|sequencing instrument,sequencing instrument slot,,,,GENEPIO:0001452,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,sequencing instrument,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the model of the sequencing instrument used.,,PCDS: The model of the sequencing instrument used.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100201,healthcare setting exposure process,,A process occuring within or in the vicinity of a healthcare environment that exposes the recipient organism to a material entity.,FALSE,,,,,,,Healthcare Setting,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100201,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,healthcare setting exposure process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A process occuring within or in the vicinity of a healthcare environment that exposes the recipient organism to a material entity.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020860,butchery cut of bison,,A piece of bison meat which has been cut according to butchery practice.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020860,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,butchery cut of bison,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A piece of bison meat which has been cut according to butchery practice.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490125,"plastic tray or pan, paper wrapping",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0125,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490125,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"plastic tray or pan, paper wrapping",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510182,aliment de disette,,Wild or semiwild foods consumed only during periods of famine when no other food is available.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0182,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510182,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,aliment de disette,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wild or semiwild foods consumed only during periods of famine when no other food is available.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100334,healthcare worker role,,A role inhering in a person that is realized when the bearer is an employee that performs labor in a healthcare setting.,FALSE,,,,,,,Healthcare Worker,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100334,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,healthcare worker role,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A role inhering in a person that is realized when the bearer is an employee that performs labor in a healthcare setting.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03310591,beef round steak (raw),,A beef steak product which is raw and is cut from the outer part of the round of a cow.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://bioregistry.io/reference/siren:F10591,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03310591,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef round steak (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A beef steak product which is raw and is cut from the outer part of the round of a cow.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_7551,gonorrhea,,"A primary bacterial infectious disease that is a sexually transmitted infection, located_in uterus, located_in fallopian tube, located_in urethra, located_in mouth, located_in throat, located_in eye or located_in anus, has_material_basis_in Neisseria gonorrhoeae, which is transmitted_by contact with the penis, vagina, mouth, or anus or transmitted_by congenitally from mother to baby during delivery. The infection has_symptom burning sensation during urination, has_symptom discharge from the penis, has_symptom increased vaginal discharge, or has_symptom vaginal bleeding between periods.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:7551,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,gonorrhea,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A primary bacterial infectious disease that is a sexually transmitted infection, located_in uterus, located_in fallopian tube, located_in urethra, located_in mouth, located_in throat, located_in eye or located_in anus, has_material_basis_in Neisseria gonorrhoeae, which is transmitted_by contact with the penis, vagina, mouth, or anus or transmitted_by congenitally from mother to baby during delivery. The infection has_symptom burning sensation during urination, has_symptom discharge from the penis, has_symptom increased vaginal discharge, or has_symptom vaginal bleeding between periods.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_36683,organochlorine compound,,An organochlorine compound is a compound containing at least one carbon-chlorine bond.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:36683,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,organochlorine compound,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An organochlorine compound is a compound containing at least one carbon-chlorine bond.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510232,food allergen labelling about molluscs and products thereof,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0232,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510232,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food allergen labelling about molluscs and products thereof,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00002259,agricultural soil,,Soil which is part of an ecosystem used for agricultural activities.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00002259,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,agricultural soil,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Soil which is part of an ecosystem used for agricultural activities.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100416,sequenced by,sequenced_by|sequenced by,"A data field which describes the name of the agency, organization or institution responsible for sequencing the isolate's genome.",FALSE,,,,,,,PCDS:sequenced_by,,,,,,,"PCDS: The name of the agency should be written out in full, (with minor exceptions) and be consistent across multiple submissions.",,,,,,,,,,,Not to be confused with 'sequence_submitted_by' http://purl.obolibrary.org/obo/GENEPIO_0001159.,,,PCDS: University of Calgary,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,sequenced_by|sequenced by,sequenced by slot,,,,GENEPIO:0100416,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,sequenced by,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A data field which describes the name of the agency, organization or institution responsible for sequencing the isolate's genome.",,PCDS: The name of the agency that generated the sequence.,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020696,piece of poultry meat (raw),,A raw piece of poultry meat.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020696,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of poultry meat (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw piece of poultry meat.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C1909,Pharmacologic Substance,therapeutic_agents|therapeutic agents|drug|Therapeutic Agent|Pharmacological Substance|Pharmacologic Substance|Pharmacologic Agent|Pharmaceuticals|Pharmaceutical Agent|Drug Substance|Drug|DRUG|Agent,"Any natural, endogenously-derived, synthetic or semi-synthetic compound with pharmacologic activity. A pharmacologic substance has one or more specific mechanism of action(s) through which it exerts one or more effect(s) on the human or animal body. They can be used to potentially prevent, diagnose, treat or relieve symptoms of a disease. Formulation specific agents and some combination agents are also classified as pharmacologic substances.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,therapeutic_agents|therapeutic agents|drug|Therapeutic Agent|Pharmacological Substance|Pharmacologic Substance|Pharmacologic Agent|Pharmaceuticals|Pharmaceutical Agent|Drug Substance|Drug|DRUG|Agent,,,,NCIT:C1909,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Pharmacologic Substance,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Any natural, endogenously-derived, synthetic or semi-synthetic compound with pharmacologic activity. A pharmacologic substance has one or more specific mechanism of action(s) through which it exerts one or more effect(s) on the human or animal body. They can be used to potentially prevent, diagnose, treat or relieve symptoms of a disease. Formulation specific agents and some combination agents are also classified as pharmacologic substances.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C1908,"Drug, Food, Chemical or Biomedical Material","Drug, Food, Chemical or Biomedical Material","An organic or inorganic substance, element, isotope, food or other materials derived from microorganism, plant, or animal sources. They can be used for the prevention, diagnosis, treatment or research of disease states, for industrial purposes, or for the promotion or maintenance of organism viability or health.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Drug, Food, Chemical or Biomedical Material",,,,NCIT:C1908,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,"Drug, Food, Chemical or Biomedical Material",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An organic or inorganic substance, element, isotope, food or other materials derived from microorganism, plant, or animal sources. They can be used for the prevention, diagnosis, treatment or research of disease states, for industrial purposes, or for the promotion or maintenance of organism viability or health.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03601065,pasture-raised food product claim,,"A label claim that the animals which the food product derives from, were raised for some portion of their lives on or with access to a pasture.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03601065,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pasture-raised food product claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A label claim that the animals which the food product derives from, were raised for some portion of their lives on or with access to a pasture.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470157,food ultra-filtration,,Separation of colloidal or very fine solid materials by filtration through microporous or semipermeable mediums. Membranes have pores in the range 2-20 nm diameter.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0157,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470157,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food ultra-filtration,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Separation of colloidal or very fine solid materials by filtration through microporous or semipermeable mediums. Membranes have pores in the range 2-20 nm diameter.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0447,Omani,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0447,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Omani,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0448,Qatari,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0448,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Qatari,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0442,Kuwaiti,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0442,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Kuwaiti,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0444,Libyan,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0444,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Libyan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0440,Israeli,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0440,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Israeli,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0446,Palestinian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0446,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Palestinian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0441,Jordanian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0441,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Jordanian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0445,Moroccan,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0445,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Moroccan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0443,Lebanese,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0443,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Lebanese,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0449,Saudi,Saudi Arabian|Saudi Arab,Individuals who self-identify or are reported by authors as living in or originating from Saudi Arabia.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Saudi Arabian|Saudi Arab,,,,HANCESTRO:0449,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Saudi,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Individuals who self-identify or are reported by authors as living in or originating from Saudi Arabia.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00004479,lamb roast,,A retail cut of meat from a lamb that is of a size for slicing into more than one portion and is suitable for roasting.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00004479,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lamb roast,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A retail cut of meat from a lamb that is of a size for slicing into more than one portion and is suitable for roasting.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00004490,pork chop,,"A retail cut of meat from a pork that is perpendicular to the spine, and usually containing a rib or riblet part of a vertebra.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00004490,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pork chop,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A retail cut of meat from a pork that is perpendicular to the spine, and usually containing a rib or riblet part of a vertebra.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102195,liter per second,,A volumetric flow rate unit which is the measure of the volume of one liter of matter crosses a given surface during the period of time equal to one second.,FALSE,,,,,,,L/s,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102195,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2026-04-13T19:52:38.515Z,,,,,,,,,,,,,,,,,,,liter per second,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A volumetric flow rate unit which is the measure of the volume of one liter of matter crosses a given surface during the period of time equal to one second.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001812,health status trend datum,,"A health status trend is a short-term prognosis about whether health is improving, worsening or unchanging",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001812,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,health status trend datum,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"A health status trend is a short-term prognosis about whether health is improving, worsening or unchanging",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001684,E. coli K antigen specification,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001684,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,E. coli K antigen specification,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/CHEBI_73772,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/APOLLO_SV_00000176,school student population census,,Motivating use case is Synthia synthetic population data.,FALSE,,,,,,,,,,,,,,Motivating use case is Synthia synthetic population data.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,APOLLO_SV:00000176,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/apollo_sv.owl,,,,,,,,,school student population census,,,,,,,,,,,,,,,,,,,,,,,,,,,,Mathias Brochhausen,,,,,,,,,,,,
http://purl.obolibrary.org/obo/APOLLO_SV_00000170,secondary school student population census,,Motivating use case is Synthia synthetic population data.,FALSE,,,,,,,,,,,,,,Motivating use case is Synthia synthetic population data.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,APOLLO_SV:00000170,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/apollo_sv.owl,,,,,,,,,secondary school student population census,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/APOLLO_SV_00000173,census,,A data set of a specific entity in a specified region at a specified time.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/APOLLO_SV_00000240,,,,,,,,,,,,,,,,,APOLLO_SV:00000173,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/apollo_sv.owl,,,,,,,,,census,,,,,,,,,,,,,,,,,,,,,,,,,,,,Mathias Brochhausen,,,,A data set of a specific entity in a specified region at a specified time.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_12554,hemolytic-uremic syndrome,,"A kidney disease that is characterized by hemolytic anemia, thrombocytopenia, and renal failure caused by platelet thrombi in the microcirculation of the kidney and other organs.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:12554,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,hemolytic-uremic syndrome,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A kidney disease that is characterized by hemolytic anemia, thrombocytopenia, and renal failure caused by platelet thrombi in the microcirculation of the kidney and other organs.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03460776,manganese added claim,,A claim that manganese has been added to an edible product.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=H0776,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03460776,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,manganese added claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A claim that manganese has been added to an edible product.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470130,freeze-drying,,Dehydration by sublimation under reduced pressure while frozen. Usually the product is not stored frozen.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0130,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470130,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,freeze-drying,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Dehydration by sublimation under reduced pressure while frozen. Usually the product is not stored frozen.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03480023,packed in sweetened liquid,,Sweetened liquid which is used as a packing medium for food material.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=K0023,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03480023,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,packed in sweetened liquid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Sweetened liquid which is used as a packing medium for food material.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C16143,Repository,Repository|Bank,A facility where items can be deposited for storage or safekeeping.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Repository|Bank,,,,NCIT:C16143,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Repository,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A facility where items can be deposited for storage or safekeeping.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_39206,dibenzopyridine,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:39206,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,dibenzopyridine,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_62732,aromatic ester,,An ester where the ester linkage is bonded directly to an aromatic system.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:62732,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,aromatic ester,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An ester where the ester linkage is bonded directly to an aromatic system.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0035171,obturator lymph node,obturator node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0229822|SCTID:245368003|NCIT:C88141|FMA:16656,,,,,,,,,,,,,,,,,,,,,,,,,obturator node,,,,UBERON:0035171,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,obturator lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00004477,Province (Iran),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00004477,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Province (Iran),http://purl.obolibrary.org/obo/GAZ_00004474,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HP_0020219,Motor seizure,,A motor seizure is a type of seizure that is characterized at onset by involvement of the skeletal musculature. The motor event could consist of an increase (positive) or decrease (negative) in muscle contraction to produce a movement.,FALSE,,,,,,,,,,,,,,This term describes the initial semiology of the seizure without specifying whether the onset is focal or generalized.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0020219,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Motor seizure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A motor seizure is a type of seizure that is characterized at onset by involvement of the skeletal musculature. The motor event could consist of an increase (positive) or decrease (negative) in muscle contraction to produce a movement.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001596,sequence annotation objective,,Sequence annotation data,FALSE,,,,,,,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/books/NBK54364/,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001596,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,sequence annotation objective,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,Sequence annotation data,,,,annotation,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102162,sample collection name,,"PCDS: If the sample is associated with a particular collection, provide the name of the sample collection. Type culture collection names can be referenced here. Private collections and sample collection project names can also be included.",FALSE,,,,,,,PCDS:sample_collection_name,,,,,,,"PCDS: If the sample is associated with a particular collection, provide the name of the sample collection. Type culture collection names can be referenced here. Private collections and sample collection project names can also be included.",,,,,,,,,,,,,,PCDS: American Type Culture Collection (ATCC),,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102162,,,,,,,,,,,,,,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,sample collection name,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PCDS: The name of the sample collection.,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470119,pasteurization by irradiation,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0119,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470119,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pasteurization by irradiation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C25189,Mother,Mother|MOTHER,A female parent.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Mother|MOTHER,,,,NCIT:C25189,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Mother,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A female parent.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510121,not pasteurized claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0121,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510121,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,not pasteurized claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C25632,Province,Province,"A region, district or division of a country; a tract; a portion a state, especially one remote from the capital.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,Province,,,,NCIT:C25632,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Province,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A region, district or division of a country; a tract; a portion a state, especially one remote from the capital.",,,lookup:http://purl.obolibrary.org/obo/GAZ_00000448,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001429,strain identifier,,A strain identifier is the unique microbial or eukaryotic strain name from a reference database that a sample has been matched to.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001429,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/NCIT_C14419,,,,,,strain identifier,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A strain identifier is the unique microbial or eukaryotic strain name from a reference database that a sample has been matched to.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001761,micromole per kilogram,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001761,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,micromole per kilogram,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,umol/kg,,,,
http://purl.obolibrary.org/obo/FOODON_02000312,pork loin country-style ribs (raw),,Raw pork loin country-style ribs.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000312,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pork loin country-style ribs (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Raw pork loin country-style ribs.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038727,juxta-intestinal mesenteric lymph node,para-intestinal mesenteric lymph node|mural mesenteric lymph node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:277581,,,,,,,,,,,,,,,,,,,,,,,,,para-intestinal mesenteric lymph node|mural mesenteric lymph node,,,,UBERON:0038727,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,juxta-intestinal mesenteric lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO:0100292,host role at time of specimen collection,,A personal health datum which specifies host role at time of specimen collection.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100292,,,,,,,,,,,,,,2022-01-31T23:53:59Z,,,,,,,,,,,,,http://purl.obolibrary.org/obo/OBI_0001619|http://purl.obolibrary.org/obo/IDO_0000629,,,,,,host role at time of specimen collection,,,,,,,,,,,,,,,,,,,,,,,,,,,,0000-0002-9578-0788,,,,A personal health datum which specifies host role at time of specimen collection.,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0021178,injury,wound|traumatic injury|trauma|injury,"Damage inflicted on the body as the direct or indirect result of an external force, with or without disruption of structural continuity.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCIT:C3671|MESH:D014947|EFO:0000546,,,,,,,,,,,,,,,,,,,,,,,,,wound|traumatic injury|trauma|injury,,,,MONDO:0021178,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#other_hierarchy|http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar|http://purl.oboInOwllibrary.org/oboInOwl/mondo#harrisons_view,,,,,,,,injury,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Damage inflicted on the body as the direct or indirect result of an external force, with or without disruption of structural continuity.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100439,original sample description,original_sample_description|original sample description,A data field which describes the original sample description provided by the sample collector.,FALSE,,,,,,,PCDS:original_sample_description,,,,,,,"PCDS: Provide the sample description provided by the original sample collector. The original description is useful as it may provide further details, or can be used to clarify higher level classifications.",,,,,,,,,,,,,,PCDS: RTE Prosciutto from deli,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,original_sample_description|original sample description,original sample description slot,,,,GENEPIO:0100439,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,original sample description,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the original sample description provided by the sample collector.,,PCDS: The original sample description provided by the sample collector.,,,,,,
http://purl.obolibrary.org/obo/FOODON_03460111,food treatment process,,"Used to specifically characterize a food product based on the treatment or processes applied to the product or any indexed ingredient. The processes include adding, substituting or removing components or modifying the food or component, e.g., through fermentation.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=H0111,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03460111,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food treatment process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Used to specifically characterize a food product based on the treatment or processes applied to the product or any indexed ingredient. The processes include adding, substituting or removing components or modifying the food or component, e.g., through fermentation.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000224,beef back rib,,A beef cut that is portioned by the number of rib bones.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000224,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef back rib,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A beef cut that is portioned by the number of rib bones.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001601,phenotypic observation data from specimen,,Phenotypic descriptive data.,FALSE,,,,,,,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/books/NBK54364/,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001601,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,phenotypic observation data from specimen,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,Phenotypic descriptive data.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C63362,Vacutainer,Vacutainer|Evacuated Blood Specimen Collection Tube,A brand of of test tube specifically designed for venipuncture; the tube contains a vacuum allowing it to suck blood though a needle and fill itself. The tube may contain additives to facilitate downstream processing and testing of the blood samples; the tube cap is color-coded to indicate the type of additive present.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Vacutainer|Evacuated Blood Specimen Collection Tube,,,,NCIT:C63362,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Vacutainer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A brand of of test tube specifically designed for venipuncture; the tube contains a vacuum allowing it to suck blood though a needle and fill itself. The tube may contain additives to facilitate downstream processing and testing of the blood samples; the tube cap is color-coded to indicate the type of additive present.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03500046,food-grade cork surface,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=N0046,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03500046,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food-grade cork surface,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_17478,aldehyde,,"A compound RC(=O)H, in which a carbonyl group is bonded to one hydrogen atom and to one R group.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:8750|CHEBI:2554|CHEBI:22291|CHEBI:17496|CHEBI:13806|CHEBI:13805|CHEBI:13753|CHEBI:13432,,,,,,CHEBI:17478,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,aldehyde,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A compound RC(=O)H, in which a carbonyl group is bonded to one hydrogen atom and to one R group.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000135,beef tenderloin (bone-in),,A meat cut that is an inside muscle of the beef loin.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000135,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef tenderloin (bone-in),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A meat cut that is an inside muscle of the beef loin.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0011642,oral epithelium from ectoderm,,An epithelium that develops_from a ectoderm and is part of a oral epithelium.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,EHDAA2:0004137,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0011642,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,oral epithelium from ectoderm,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An epithelium that develops_from a ectoderm and is part of a oral epithelium.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_25698,ether,,"An organooxygen compound with formula ROR, where R is not hydrogen.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:25698,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,ether,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An organooxygen compound with formula ROR, where R is not hydrogen.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100451,host breed,host (ecotype),"A host field which describes a specific group of domestic animals or plants having homogeneous appearance, homogeneous behavior, and other characteristics that distinguish it from other animals or plants of the same species and that were arrived at through selective breeding.",FALSE,,,,,,,PCDS:host_breed,,,,,,,PCDS: Provide the name of the breed of the host organism.,,,,,,,,,,,,,,PCDS: Holstein,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,host (ecotype),host (ecotype) slot,,,,GENEPIO:0100451,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,host breed,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A host field which describes a specific group of domestic animals or plants having homogeneous appearance, homogeneous behavior, and other characteristics that distinguish it from other animals or plants of the same species and that were arrived at through selective breeding.",,"PCDS: A breed is a specific group of domestic animals or plants having homogeneous appearance, homogeneous behavior, and other characteristics that distinguish it from other animals or plants of the same species and that were arrived at through selective breeding.",,,,,,
http://purl.obolibrary.org/obo/CHEBI_87211,fluoroquinolone antibiotic,,An organonitrogen heterocyclic antibiotic containing a quinolone (or quinolone-like) moiety and which have a fluorine atom attached to the central ring system.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:87211,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,fluoroquinolone antibiotic,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An organonitrogen heterocyclic antibiotic containing a quinolone (or quinolone-like) moiety and which have a fluorine atom attached to the central ring system.,,,,,,,,
http://purl.obolibrary.org/obo/ARO_3004420,chloramphenicol acetyltransferase assay (CAT),,Commercial colorimetric assay for detection of chloramphenicol modifying enzyme chloramphenicol acetyltransferase.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ARO:3004420,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/aro.owl,,,,,,,,,chloramphenicol acetyltransferase assay (CAT),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Commercial colorimetric assay for detection of chloramphenicol modifying enzyme chloramphenicol acetyltransferase.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00004489,lamb chop,,"A retail cut of meat from a lamb that is perpendicular to the spine, and usually containing a rib or riblet part of a vertebra.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00004489,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lamb chop,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A retail cut of meat from a lamb that is perpendicular to the spine, and usually containing a rib or riblet part of a vertebra.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100190,"occupational, residency or patronage exposure process",,A process occuring within or in the vicinity of a human residential environment that exposes the recipient organism to a material entity.,FALSE,,,,,,,"Occupational, Residency or Patronage Exposure",,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100190,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,"occupational, residency or patronage exposure process",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A process occuring within or in the vicinity of a human residential environment that exposes the recipient organism to a material entity.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_15782,viomycin,,"A cyclic peptide antibiotic produced by the actinomycete <em>Streptomyces</em> <em>puniceus</em>, used in the treatment of tuberculosis.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:9995|CHEBI:579539|CHEBI:27296|CHEBI:15312,,,,,,CHEBI:15782,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,viomycin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A cyclic peptide antibiotic produced by the actinomycete <em>Streptomyces</em> <em>puniceus</em>, used in the treatment of tuberculosis.",,,,,,,,
http://www.ebi.ac.uk/ancestro/ancestro_0004,obsolete: ancestral group,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ancestro_0004,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: ancestral group,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro_0004,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490118,"paper bag, sack or pouch, foil liner",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0118,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490118,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"paper bag, sack or pouch, foil liner",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100774,water catchment area human population range,water catchment human population range,An environmental data field which describes the human population range of the water catchment that contributes effluent to a wastewater site.,FALSE,,,,,,,PCDS:water_catchment_area_human_population_range,,,,,,,"PCDS: Where catchment population is not well known, provide an estimation of population size by selecting a value from the picklist.",,,,,,,,,,,,,,"PCDS: 1,000 - 10,000 people",,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,water catchment human population range,water catchment human population range slot,,,,GENEPIO:0100774,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,water catchment area human population range,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the human population range of the water catchment that contributes effluent to a wastewater site.,,PCDS: The human population range of the water catchment that contributes effluent to a wastewater site.,,,,,,
http://purl.obolibrary.org/obo/COB_0001300,device,,A processed material entity which is designed to be capable of a process.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,COB:0001300,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/cob.owl,,,,,,,,,device,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A processed material entity which is designed to be capable of a process.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020976,beef roast (boneless),,A boneless beef roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020976,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef roast (boneless),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A boneless beef roast.,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0002052,lymphadenitis,chronic lymphadenitis|chronic adenitis|acute lymphadenitis|acute adenitis,Acute or chronic inflammation of one or more lymph nodes. It is usually caused by an infectious process.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,icd11.foundation:1483611415|UMLS:C0024205|SCTID:41174002|NCIT:C26821|MESH:D008199|MEDGEN:7410|ICD9:683|ICD9:289.1|HP:0002840|DOID:1602,,,,,,,,,,,,,,,,,,,,,,,,,lymphadenitis (disease)|lymphadenitis|lymph nodeitis|lymph node inflammation|adenitis,chronic lymphadenitis|chronic adenitis|acute lymphadenitis|acute adenitis,,,MONDO:0002052,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,lymphadenitis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Acute or chronic inflammation of one or more lymph nodes. It is usually caused by an infectious process.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100419,sporting event datum,,A recreational event where the primary emphasis is a sporting deemonstration or athletic competition.,FALSE,,,,,,,Sporting Event,,,,,,,,,,,,,,"https://www.lawinsider.com/dictionary/sporting-and-recreational-event#:~:text=Related%20Definitions&text=Sporting%20and%20Recreational%20Event%20means,yoga%2C%20and%20other%20exercise%20gatherings.",,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100419,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-01-23T00:42:19.315Z,,,,,,,,,,,,,,,,,,,sporting event datum,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A recreational event where the primary emphasis is a sporting deemonstration or athletic competition.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490411,bass fibre container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0411,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490411,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,bass fibre container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C15306,Primary Prevention,"Primary Prevention|Prevention, Primary|PRIMARY PREVENTION","Prevention of disease or mental disorders in susceptible individuals or populations through promotion of health, including mental health, and specific protection, as in immunization, as distinguished from the prevention of complications or after-effects of existing disease.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Primary Prevention|Prevention, Primary|PRIMARY PREVENTION",,,,NCIT:C15306,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Primary Prevention,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Prevention of disease or mental disorders in susceptible individuals or populations through promotion of health, including mental health, and specific protection, as in immunization, as distinguished from the prevention of complications or after-effects of existing disease.",,,,,,,,
http://purl.obolibrary.org/obo/OBI_0002792,patient gown,,A personal protective clothing item which is a gown designed for use by a patient to facilitate caregiving by medical staff.,FALSE,,,,,,,hospital gown,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Patient_gown,,,,,patient gown,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0002792,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,patient gown,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://orcid.org/0000-0002-8844-9165,,,https://github.com/obi-ontology/obi/issues/1193,A personal protective clothing item which is a gown designed for use by a patient to facilitate caregiving by medical staff.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0001628,investigation identifier,http://purl.obolibrary.org/obo/OMIABIS_0000006,A CRID symbol used to identify an investigation.,FALSE,,,,,,,,,,,,,,,,,,,,,NIAID GSCID-BRC metadata working group,,,,,investigation identifier,,,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/OMIABIS_0000006,,,,OBI:0001628,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,investigation identifier,,,,,,,project ID,,,,,,,,,,,,,,,,,,,,,"Person: Chris Stoeckert, Jie Zhneg",,,,A CRID symbol used to identify an investigation.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490106,"glass container, tinless steel lid",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0106,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490106,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"glass container, tinless steel lid",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490423,closing cap or lid,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0423,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490423,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,closing cap or lid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490225,"multicomponent adhesive, water soluble",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0225,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490225,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"multicomponent adhesive, water soluble",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02021039,buffalo chop (raw),,A raw buffalo chop.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02021039,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,buffalo chop (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw buffalo chop.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0004433,Oxford Nanopore Flongle,,"An adapter for MinION or GridION DNA sequencers manufactured by the Oxford Nanopore corporation that enables sequencing on smaller, single-use flow cells.",FALSE,,,,,,,,,,,,,,,,,,,,,https://store.nanoporetech.com/flongle.html,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0004433,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-5275-8866,2023-06-21T13:02:13Z,,,,,,,,,,,,,,,,,,,Oxford Nanopore Flongle,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An adapter for MinION or GridION DNA sequencers manufactured by the Oxford Nanopore corporation that enables sequencing on smaller, single-use flow cells.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001699,listeria serotype 4c,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001699,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,listeria serotype 4c,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002132,detection limit,,The detection limit denotes the smallest measure that can be detected with reasonable certainty for a given analytical procedure.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002132,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IDO_0000547,,,,,,detection limit,,,,,,,,,,,,,,,,,,,,,,,,,,,,Emma Griffiths,,,,The detection limit denotes the smallest measure that can be detected with reasonable certainty for a given analytical procedure.,,,"help:Detection limits should include the numerical cut-off (threshold) value and units for determining positive results e.g. qPCR value, CFUs.",,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002049,obsolete: antimicrobial resistance testing platform,,The instrumentation used to determine minimum inhibitory concentration values.,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002049,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: antimicrobial resistance testing platform,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,http://purl.obolibrary.org/obo/ARO_3004390,,,The instrumentation used to determine minimum inhibitory concentration values.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490183,"plastic container, rigid or semirigid, tin-plated steel lid",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0183,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490183,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"plastic container, rigid or semirigid, tin-plated steel lid",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_25477,naphthalenes,,Any benzenoid aromatic compound having a skeleton composed of two <em>ortho</em>-fused benzene rings.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:25477,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,naphthalenes,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any benzenoid aromatic compound having a skeleton composed of two <em>ortho</em>-fused benzene rings.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0000003,naris,,Orifice of the olfactory system. The naris is the route by which odorants enter the olfactory system[MAH].,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:Naris|VHOG:0000663|SCTID:272650008|MA:0000282|EMAPA:17847|EHDAA:9083|EHDAA2:0001225|AAO:0000311,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0000003,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,naris,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Orifice of the olfactory system. The naris is the route by which odorants enter the olfactory system[MAH].,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0000001,gross anatomical part,,"Anatomical structure that is part of a multicellular organism and is at the gross anatomical level, e.g. above the level of a cell.  Included are portions of organism substances such as blood, multi-cell-part structures such as axon tracts, acellular anatomical structures such as hair, and organism subdivisions such as head. Excluded is the whole organism and more granular parts of the organism, such as atoms, molecules, macromolecular complexes and cells.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CARO:0001008,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0000001,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,gross anatomical part,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Anatomical structure that is part of a multicellular organism and is at the gross anatomical level, e.g. above the level of a cell.  Included are portions of organism substances such as blood, multi-cell-part structures such as axon tracts, acellular anatomical structures such as hair, and organism subdivisions such as head. Excluded is the whole organism and more granular parts of the organism, such as atoms, molecules, macromolecular complexes and cells.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0000002,uterine cervix,cervix,"Lower, narrow portion of the uterus where it joins with the top end of the vagina.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:CervixUteri|Wikipedia:Cervix|VHOG:0001359|UMLS:C0007874|SCTID:181453009|NCIT:C12311|MESH:D002584|MAT:0000292|MA:0000392|GAID:376|FMA:17740|EV:0100114|EMAPA:29927|EFO:0000979|CALOHA:TS-0134|BTO:0002249|BTO:0001421,,,,,,,,,,,,,,,,,,,,,,,,cervix,uterine cervix|neck of uterus|cervix uteri|cervical canal of uterus|caudal segment of uterus|canalis cervicis uteri,,,,UBERON:0000002,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,uterine cervix,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Lower, narrow portion of the uterus where it joins with the top end of the vagina.",,,,,,,,
http://purl.obolibrary.org/obo/BTO_0000762,lung cancer cell line,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,BTO:0000762,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/bto.owl,,,,,,,,,lung cancer cell line,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001077,H antigen,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Snomed: Concept 260823008,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001077,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,H antigen,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100717,microbiological identification tag (bioMérieux API),microbiological identification data type (bioMérieux API),A microbiological characterization data tag which indicates the presence of microbiological identification data dervied using the bioMérieux API identification system.,FALSE,,,,,,,microbiological identification (bioMérieux API),,,,,,,Example Guidance: Use this tag to indicate additional data is available that provides identification information from microbiology properties generated using bioMérieux API.,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,microbiological identification data type (bioMérieux API),,,,GENEPIO:0100717,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-05-18T19:08:34.869Z,,,,,,,,,,,,,,,,,,,microbiological identification tag (bioMérieux API),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A microbiological characterization data tag which indicates the presence of microbiological identification data dervied using the bioMérieux API identification system.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0290,genetically isolated population,population isolate|founder population,A population with increased genetic homogeneity and reduced genetic variation due to cultural or geographic isolation,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,population isolate|founder population,,,,HANCESTRO:0290,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,genetically isolated population,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population with increased genetic homogeneity and reduced genetic variation due to cultural or geographic isolation,,,,,,,,
http://www.ebi.ac.uk/efo/EFO_0020045,prostaglandins measurement,,"The determination of the amount of prostaglandins present in a sample, typically blood ",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PMID:34503513,,,,,,,,,,,,,,,,,,,,,,,,,,,,,efo:EFO_0020045,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,prostaglandins measurement,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The determination of the amount of prostaglandins present in a sample, typically blood ",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00003368,food contact material,,Food contact materials are materials that are intended to be in contact with food. These can be things that are quite obvious like a glass or a can for soft drinks as well as machinery in a food factory or a coffee machine.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00003368,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food contact material,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Food contact materials are materials that are intended to be in contact with food. These can be things that are quite obvious like a glass or a can for soft drinks as well as machinery in a food factory or a coffee machine.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_35363,carbohydrazide,,A hydrazide consisting of hydrazine carrying one or more carboacyl groups.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:35363,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,carbohydrazide,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A hydrazide consisting of hydrazine carrying one or more carboacyl groups.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100184,contact with known COVID-19 case exposure process,contact with known COVID19 case,A process occuring within or in the vicinity of a human with a confirmed case of COVID-19 that exposes the recipient organism to SARS-CoV-2.,FALSE,,,,,,,Contact with Known COVID-19 Case,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,contact with known COVID19 case,,,,GENEPIO:0100184,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,contact with known COVID-19 case exposure process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A process occuring within or in the vicinity of a human with a confirmed case of COVID-19 that exposes the recipient organism to SARS-CoV-2.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03311468,beef sirloin steak (cooked),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://bioregistry.io/reference/siren:F11468,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03311468,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef sirloin steak (cooked),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C2931,Cardiovascular Disorder,"Unspecified disorder of circulatory system|Disorder of Cardiovascular System|Cardiovascular_Disease|Cardiovascular Disorder, NOS|Cardiovascular Disorder|Cardiovascular Disease (CVD)|Cardiovascular Disease","A non-neoplastic or neoplastic disorder affecting the heart or the vessels (arteries, veins and lymph vessels). Representative examples of non-neoplastic cardiovascular disorders are endocarditis and hypertension. Representative examples of neoplastic cardiovascular disorders are endocardial myxoma and angiosarcoma.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Unspecified disorder of circulatory system|Disorder of Cardiovascular System|Cardiovascular_Disease|Cardiovascular Disorder, NOS|Cardiovascular Disorder|Cardiovascular Disease (CVD)|Cardiovascular Disease",,,,NCIT:C2931,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Cardiovascular Disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A non-neoplastic or neoplastic disorder affecting the heart or the vessels (arteries, veins and lymph vessels). Representative examples of non-neoplastic cardiovascular disorders are endocarditis and hypertension. Representative examples of neoplastic cardiovascular disorders are endocardial myxoma and angiosarcoma.",,,,,,,,
http://purl.obolibrary.org/obo/BFO_0000016,disposition,,"A disposition is an entity that causes a specific process or transformation in an entity in which it inheres, under specific circumstances and in conjunction with the laws of nature. For example, the disposition of vegetables to decay when not refrigerated, the disposition of blood to coagulate, the disposition of a patient with a weakened immune system to contract disease.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCIt:C41205,,,,,,,,,,,,,,,,,,,,,,,http://www.ifomis.org/bfo/1.1/snap#Disposition,,,,,,BFO:0000016,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl|http://purl.obolibrary.org/obo/ogms.owl|http://purl.obolibrary.org/obo/mondo.owl|http://purl.obolibrary.org/obo/ido.owl|http://purl.obolibrary.org/obo/cob.owl,,,,,,,,,disposition|disposition,,,,,,,,,,,,,,,,,,,,,,,,,,,,James Malone modified from original,,,,"A disposition is an entity that causes a specific process or transformation in an entity in which it inheres, under specific circumstances and in conjunction with the laws of nature. For example, the disposition of vegetables to decay when not refrigerated, the disposition of blood to coagulate, the disposition of a patient with a weakened immune system to contract disease.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001931,SOLiD PI System,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI SRA: AB SOLiD PI System,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001931,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SOLiD PI System,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03480034,packed in gravy or sauce,,Gravy or sauce which is used as a packing medium for food material.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=K0034,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03480034,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,packed in gravy or sauce,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Gravy or sauce which is used as a packing medium for food material.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490101,"plastic squeeze bottle or tube, top lined with foil",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0101,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490101,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"plastic squeeze bottle or tube, top lined with foil",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03500027,nylon surface,,A generic term for a class of polyamides containing repeating amide groups connected by methylene units. The most common types used in food industry are ny-lon-66 and nylon-11.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=N0027,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03500027,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,nylon surface,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A generic term for a class of polyamides containing repeating amide groups connected by methylene units. The most common types used in food industry are ny-lon-66 and nylon-11.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470152,ingredient preservation by irradiation,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0152,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470152,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,ingredient preservation by irradiation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03430113,food physical quality,,"The physical state of the food product (liquid, semiliquid, semisolid, or solid). Solid food products are further subdivided by shape or form. Terms are provided for products that have both liquid and solid components or that incorporate air or other gases. [FDA CFSAN 1995]",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=E0113,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03430113,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food physical quality,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The physical state of the food product (liquid, semiliquid, semisolid, or solid). Solid food products are further subdivided by shape or form. Terms are provided for products that have both liquid and solid components or that incorporate air or other gases. [FDA CFSAN 1995]",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530127,plat-de-cote,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0127,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530127,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,plat-de-cote,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0000427,enzyme,,"(protein or rna) or has_part (protein or rna) and
has_function some GO:0003824 (catalytic activity)",FALSE,,,,,,,,,,,,,,,,,,,,,GROUP:OBI,,,,"MC: known issue: enzyme doesn't classify under material entity for now as it isn't stated that anything
that has_part some material entity is a material entity. If we add as equivalent classes to material entity has_part some material entity and part_of some material entity  (each one in his own necessary and sufficient block) Pellet in P3 doesn't classify any more.",enzyme,,,,,http://purl.obolibrary.org/obo/IAO_0000125,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0000427,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,enzyme,,,,,,,,,,,,,,,,,,,,,,,,,,,,person: Melanie Courtot,,,,"(protein or rna) or has_part (protein or rna) and
has_function some GO:0003824 (catalytic activity)",,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0005039,reproductive system disorder,reproductive system disorder|reproductive system disease or disorder|reproductive system disease|reproductive disease|genital system disease|genital disorders|disorder of reproductive system|disease or disorder of reproductive system|disease of reproductive system,A disease involving the reproductive system.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Reproductive_system_disease|UMLS:C0178829|SCTID:362968007|NCIT:C4875|MEDGEN:61253|EFO:0000512|DOID:15,,,,,,,,,,,,,,,,,,,,,,,,,reproductive system disorder|reproductive system disease or disorder|reproductive system disease|reproductive disease|genital system disease|genital disorders|disorder of reproductive system|disease or disorder of reproductive system|disease of reproductive system,,,,MONDO:0005039,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl|http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#rare_grouping|http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar|http://purl.oboInOwllibrary.org/oboInOwl/mondo#harrisons_view,,,,,,,,reproductive system disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A disease involving the reproductive system.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100837,urinary contamination indicator,urinary contamination indicator,"An environmental data field which describes the gene, virus, bacteria, or substance used to measure the sanitary quality of water in regards to urinary contamination.",FALSE,,,,,,,PCDS:urinary_contamination_indicator,,,,,,,"PCDS: If a urinary contamination indicator was measured, select it from the picklist.",,,,,,,,,,,,,,PCDS: urobilin,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,urinary contamination indicator,urinary contamination indicator slot,,,,GENEPIO:0100837,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,urinary contamination indicator,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An environmental data field which describes the gene, virus, bacteria, or substance used to measure the sanitary quality of water in regards to urinary contamination.",,"PCDS: A gene, virus, bacteria, or substance used to measure the sanitary quality of water in regards to urinary contamination.",,,,,,
http://purl.obolibrary.org/obo/HP_0100806,Sepsis,Infection in blood stream,Sepsis is defined as life-threatening organ dysfunction caused by a dysregulated host response to infection.,FALSE,,,,,,,,,,,,,,"For clinical operationalization, organ dysfunction can be represented by an increase in the Sequential Sepsis-related Organ Failure Assessment (SOFA) score of 2 points or more.",,,,,,,,,,,,,,,,,,UMLS:C0036690,,,,,,,,,,,,,,,,,,,,,,,,,Infection in blood stream,,,,HP:0100806,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Sepsis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Sepsis is defined as life-threatening organ dysfunction caused by a dysregulated host response to infection.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00002698,barramundi food product,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00002698,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,barramundi food product,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_24782,imide,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:24782,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,imide,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000011,other specimen scope,,Other: specify the sample scope that was used.,FALSE,,,,,,,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/books/NBK54364/,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000011,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,other specimen scope,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,Other: specify the sample scope that was used.,,,,other,,,,
http://purl.obolibrary.org/obo/CHEBI_71229,telavancin,,A glycopeptide that is vancomycin substituted at position N-3'' by a 2-(decylamino)ethyl group and at position C-29 by a (phosphonomethyl)aminomethyl group. Used as its hydrochloride salt for treatment of adults with complicated skin and skin structure infections caused by bacteria.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:71229,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,telavancin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A glycopeptide that is vancomycin substituted at position N-3'' by a 2-(decylamino)ethyl group and at position C-29 by a (phosphonomethyl)aminomethyl group. Used as its hydrochloride salt for treatment of adults with complicated skin and skin structure infections caused by bacteria.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_33709,amino acid,,A carboxylic acid containing one or more amino groups.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:22477|CHEBI:13815,,,,,,CHEBI:33709,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,amino acid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A carboxylic acid containing one or more amino groups.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_146295,pyranobenzodioxin,,Any organic heterotricyclic compound whose core skeleton consists of a benzodioxin ring that is ortho-fused to a pyran ring.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:146295,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,pyranobenzodioxin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any organic heterotricyclic compound whose core skeleton consists of a benzodioxin ring that is ortho-fused to a pyran ring.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002000,draft tuberculosis - case specimen characteristics,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002000,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,draft tuberculosis - case specimen characteristics,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000406,Makonde,,A Bantu Eastern population with a population size of 1.3 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000406,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Makonde,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Bantu Eastern population with a population size of 1.3 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000402,Embu,,A Bantu Eastern population with a population size of >0.4 million,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000402,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Embu,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Bantu Eastern population with a population size of >0.4 million,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000408,Swahili,,A Bantu Eastern population with a population size of >0.1 millons,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000408,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Swahili,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Bantu Eastern population with a population size of >0.1 millons,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000404,Kisii,,A Bantu Eastern population with a population size of 2.2 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000404,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Kisii,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Bantu Eastern population with a population size of 2.2 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000407,Nyoro,,A Bantu Eastern population with a population size of 1.4 million,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000407,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Nyoro,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Bantu Eastern population with a population size of 1.4 million,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000405,Luhya,,A Bantu Eastern population with a population size of 5.4 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000405,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Luhya,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Bantu Eastern population with a population size of 5.4 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000401,Chaga,,The Chaga are a Bantu Eastern population with a population size of 2 million.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000401,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Chaga,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The Chaga are a Bantu Eastern population with a population size of 2 million.,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000400,Basoga,,A Bantu Eastern population with a population size of 2.9,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000400,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Basoga,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Bantu Eastern population with a population size of 2.9,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000409,Tumbuka,,A Bantu Eastern population with a population size of 1.546 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000409,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Tumbuka,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Bantu Eastern population with a population size of 1.546 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000403,Ganda,,A Bantu Eastern population with a population size of 6.7 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000403,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Ganda,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Bantu Eastern population with a population size of 6.7 millions,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02010214,"piece of light animal meat (skinless, raw)",,A raw piece of skinless light animal meat.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02010214,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"piece of light animal meat (skinless, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw piece of skinless light animal meat.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000239,lamb shoulder,,A lamb primal cut that is the upper foreleg extending from elbow to blade bone.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000239,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lamb shoulder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A lamb primal cut that is the upper foreleg extending from elbow to blade bone.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000286,pork leg sirloin half (raw),,A raw pork leg sirloin half cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000286,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pork leg sirloin half (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw pork leg sirloin half cut.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00005660,Province (Dominican Republic),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00005660,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Province (Dominican Republic),http://purl.obolibrary.org/obo/GAZ_00003952,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00005666,Province (Gabon),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00005666,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Province (Gabon),http://purl.obolibrary.org/obo/GAZ_00001092,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00005669,"populated place, Gabon",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00005669,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Gabon",http://purl.obolibrary.org/obo/GAZ_00001092,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0001128,micropipette,,A microinjection device that is used to measure very small volumes of liquids.,FALSE,,,,,,,,,,,,,,,,,,,,,http://www.answers.com/topic/micropipette,,,,,micropipette,,,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0001128,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,micropipette,,,,,,,,,,,,,,,,,,,,,,,,,,,,PERSON: Erik Segerdell,,,,A microinjection device that is used to measure very small volumes of liquids.,,,,,,,,
http://purl.obolibrary.org/obo/IAO_0000010,software,,"Software is a plan specification composed of a series of instructions that can be 
interpreted by or directly executed by a processing unit.",FALSE,,,,,,,,,,,,,,,,,,,,,GROUP: OBI,,,,see sourceforge tracker discussion at http://sourceforge.net/tracker/index.php?func=detail&aid=1958818&group_id=177891&atid=886178,software,,,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,IAO:0000010,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/iao.owl,,,,,,,,,software,,,,,,,,,,,,,,,,,,,,,,,,,,,,PERSON: Melanie Courtot|PERSON: Chris Stoeckert|PERSON: Bjoern Peters|PERSON: Alan Ruttenberg,,,,"Software is a plan specification composed of a series of instructions that can be 
interpreted by or directly executed by a processing unit.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001881,datetime set item,,A datetime set item is a datetime that has been grouped semantically under a given type of process,FALSE,,,,,,,,,,,,,,The instant is subject to the level of granularity of the observed time.  Year / Month / Day / Hour / Minute / Second,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001881,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,datetime set item,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A datetime set item is a datetime that has been grouped semantically under a given type of process,,,,,$year/$month/$day,$year/$month/$day,"/^(:<year>(19|20)\d\d)([- /.])(:<month>0[1-9]|1[012])\2(:<day>0[1-9]|[12][0-9]|3[01])$/
/^(:<month>0[1-9]|1[012])([- /.])(:<day>0[1-9]|[12][0-9]|3[01])\2(:<year>(19|20)\d\d)$/ 
/^(:<day>0[1-9]|[12][0-9]|3[01])([- /.])(:<month>0[1-9]|1[012])\2(:<year>(19|20)\d\d)$/",
http://purl.obolibrary.org/obo/FOODON_03490339,tissue paper container,,"Porous, wet-strength paper, e.g. tea bag.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0339,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490339,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,tissue paper container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Porous, wet-strength paper, e.g. tea bag.",,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00012231,"populated place, Bolivia",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00012231,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Bolivia",http://purl.obolibrary.org/obo/GAZ_00002511,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001796,data protected,,A 'data protected' role between a user and given data entails that a user must be authorized in order to view that data.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001796,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,data protected,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A 'data protected' role between a user and given data entails that a user must be authorized in order to view that data.,,,,,,,,
http://purl.obolibrary.org/obo/SO_0000353,sequence_assembly,sequence assembly|http://edamontology.org/data_0925,A sequence of nucleotides that has been algorithmically derived from an alignment of two or more different sequences.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/SO_0001462,,http://en.wikipedia.org/wiki/Sequence_assembly,,,,,,,,,,,,,,,,,,,,,,,,,sequence assembly|http://edamontology.org/data_0925,,,,SO:0000353,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/so.owl,http://purl.oboInOwllibrary.org/oboInOwl/so#SOFA,,http://purl.obolibrary.org/obo/COB_0000022,,,,,,sequence_assembly,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A sequence of nucleotides that has been algorithmically derived from an alignment of two or more different sequences.,,,,sequence assembly,,,,
http://purl.obolibrary.org/obo/ARO_3004408,Omron,,Specific vendor of automated system of analysis for determining antimicrobial susceptibility based in Japan. Omron is the developer of the MicroScan automated testing platform.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ARO:3004408,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/aro.owl,,,,,,,,,Omron,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Specific vendor of automated system of analysis for determining antimicrobial susceptibility based in Japan. Omron is the developer of the MicroScan automated testing platform.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_24471,halogen molecular entity,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:24471,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,halogen molecular entity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001114,phenotype project objective,,Phenotype: phenotypic measurements for submission to dbGaP,FALSE,,,,,,,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/books/NBK54364/,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001114,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,phenotype project objective,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,Phenotype: phenotypic measurements for submission to dbGaP,,,,phenotype,,,,
http://purl.obolibrary.org/obo/NCIT_C26323,Hematopoietic and Lymphoid Cell Disorder,Hematopoietic and Lymphoid Cell Disorder|Hematological Disorder|Hematologic and Lymphoid Cell Disorder|Hematologic and Lymphocytic Disorder|Hematologic Disorder|Blood Disorder|Blood Disease,"A non-neoplastic or neoplastic disorder that arises from the hematopoietic and lymphoid cells. Representative examples include disorders that affect the synthesis of hemoglobin, coagulation disorders, leukemias, and lymphomas.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Hematopoietic and Lymphoid Cell Disorder|Hematological Disorder|Hematologic and Lymphoid Cell Disorder|Hematologic and Lymphocytic Disorder|Hematologic Disorder|Blood Disorder|Blood Disease,,,,NCIT:C26323,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Hematopoietic and Lymphoid Cell Disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A non-neoplastic or neoplastic disorder that arises from the hematopoietic and lymphoid cells. Representative examples include disorders that affect the synthesis of hemoglobin, coagulation disorders, leukemias, and lymphomas.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_135278,terizidone,,,FALSE,,,,,,,Trd,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:135278,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,terizidone,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_39201,phenazines,,Any  organonitrogen heterocyclic compound based on a phenazine skeleton and derivatives.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:39201,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,phenazines,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any  organonitrogen heterocyclic compound based on a phenazine skeleton and derivatives.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002225,specimen related service,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002225,,,,,,,,,,,,,,2019-05-03T02:52:19Z,,,,,,,,,,,,,,,,,,,specimen related service,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,"order:
GENEPIO:0002222 # specimen collection service
GENEPIO:0002226 # specimen repository/biobank service
GENEPIO:0002224 # isolate preparation service
OBI:0001904 # sequencing service
OBI:0000992 # DNA sequencing service
GENEPIO:0002223 # bioinformatics analysis service",,,,,
http://purl.obolibrary.org/obo/FOODON_00004088,direct heating of container,,"A heating container process in which the container conducts heat by being in proximity to an open flame, a hot surface or an oven.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00004088,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,direct heating of container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A heating container process in which the container conducts heat by being in proximity to an open flame, a hot surface or an oven.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0101114,influenza antiviral agent,,,FALSE,,,,,,,PCDS:influenza_antiviral_agent,,,,,,,,,,,,,,,,,,,,,,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0101114,,,,,,,,,,,,,,2026-04-13T17:18:02.461Z,,,,,,,,,,,,,,,,,,,influenza antiviral agent,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PCDS: A substance that destroys or inhibits replication of viruses.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000090,assembly method,,Assembly method refers to how the reads were assembled into contigs for which either a de novo or mapping (reference based) strategy is used.,FALSE,,,,,,,,,,,,,,,,,,,,,GROUP: MIxS,,,,,,,the GROUP: MIxS term encompasses assembly method; estimated error rate; method of calculation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000090,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,,,,,,,assembly method,,,,,Assembly QC,,,,,,,,,,,,,,,,,,,,,,Assembly,,,Standard Term,,Assembly method refers to how the reads were assembled into contigs for which either a de novo or mapping (reference based) strategy is used.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001038,infection-specific food detail,,Some bacteria are associated with particular foods.  Need relationship,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001038,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,infection-specific food detail,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,Some bacteria are associated with particular foods.  Need relationship,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C15631,Aspiration,aspiration|Aspiration|ASPIRATION,"Procedure using suction, usually with a thin needle and syringe, to remove bodily fluid or tissue.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,aspiration|Aspiration|ASPIRATION,,,,NCIT:C15631,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Aspiration,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Procedure using suction, usually with a thin needle and syringe, to remove bodily fluid or tissue.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03500045,food-grade textile surface,,A surface of a food-grade textile,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=N0045,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03500045,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food-grade textile surface,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A surface of a food-grade textile,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001488,exposure event start,,"A date-time datum that marks the start of a human or animal exposure event to a suspected pathogen agent, directly or indirectly.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001488,,,,This datum is NOT predicted as a function of pathogen and first symptom date.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,exposure event start,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"A date-time datum that marks the start of a human or animal exposure event to a suspected pathogen agent, directly or indirectly.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100273,sample has epidemiological link to Variant of Concern strategy,sample has epidemiological link to VoC,A variant surveillance strategy in which a sample is sequenced because the individual from which the sample is derived has a known epidemiological link to a variant case.,FALSE,,,,,,,Sample has epidemiological link to Variant of Concern (VoC),,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,sample has epidemiological link to VoC,,,,GENEPIO:0100273,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,sample has epidemiological link to Variant of Concern strategy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A variant surveillance strategy in which a sample is sequenced because the individual from which the sample is derived has a known epidemiological link to a variant case.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0001177,RNA sequencing assay,,An assay that determines the sequence of an RNA molecule.,FALSE,,,,,,,,,,,,,,,,,,,,,Bjoern Peters,,,,,RNA sequencing assay,,,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0001177,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,RNA sequencing assay,,,,,,,,,,,,,,,,,,,,,,,,,,,,Bjoern Peters,,,,An assay that determines the sequence of an RNA molecule.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_35507,natural product fundamental parent,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:35507,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,natural product fundamental parent,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/OMIT_0017781,"Sequence Analysis, DNA",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OMIT:0017781,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/omit.owl,,,,,,,,,"Sequence Analysis, DNA",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/OMIT_0017780,Sequence Analysis,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OMIT:0017780,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/omit.owl,,,,,,,,,Sequence Analysis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100838,urinary contamination value,urinary contamination value,An environmental data field which describes the numerical value of a measurement of urinary contamination.,FALSE,,,,,,,PCDS:urinary_contamination_value,,,,,,,PCDS: Provide the numerical value of the measured urinary contamination.,,,,,,,,,,,,,,PCDS: 3,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,urinary contamination value,urinary contamination value slot,,,,GENEPIO:0100838,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,urinary contamination value,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the numerical value of a measurement of urinary contamination.,,PCDS: The numerical value of a measurement of urinary contamination.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000158,clone ends project,,A sequencing project involving clone-ends,FALSE,,,,,,,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/books/NBK54364/,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000158,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,clone ends project,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A sequencing project involving clone-ends,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0002754,cDNA library,,A collection of DNA molecules with sequences complementary to a specified set of mRNA molecules and commonly developed by enzymatic reverse transcription.,FALSE,,,,,,,,,,,,,,,,,,,,,modified from Wikipedia,,,,,cDNA library|,,cDNA library lacks the non-coding and regulatory elements found in genomic DNA,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0002754,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,cDNA library,,,,,,,,,,,,,,,,,,,,,,,,,,,,Dan Berrios,,,,A collection of DNA molecules with sequences complementary to a specified set of mRNA molecules and commonly developed by enzymatic reverse transcription.,,,,,,,,
http://purl.obolibrary.org/obo/IAO_0000634,notes section,,"A part of a document containing typically short notes about the document itself and/or the authors. Often the notes section contains subsections related to funding, competing interests, ethical approval, etc.",FALSE,,,,,,,notes,,,,,,,,,,,,,,,,,,,notes section,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,IAO:0000634,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/iao.owl,,,,,,,,,notes section,,,,,,,,,,,,,,,,,,,,,,,,,,,,PERSON: Bill Baumgartner,,,,"A part of a document containing typically short notes about the document itself and/or the authors. Often the notes section contains subsections related to funding, competing interests, ethical approval, etc.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_3534,cephalexin,,"A semisynthetic first-generation cephalosporin antibiotic having methyl and β-(2<i>R</i>)-2-amino-2-phenylacetamido groups at the 3- and 7- of the cephem skeleton, respectively. It is effective against both Gram-negative and Gram-positive organisms, and is used for treatment of infections of the skin, respiratory tract and urinary tract.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:3534,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,cephalexin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A semisynthetic first-generation cephalosporin antibiotic having methyl and β-(2<i>R</i>)-2-amino-2-phenylacetamido groups at the 3- and 7- of the cephem skeleton, respectively. It is effective against both Gram-negative and Gram-positive organisms, and is used for treatment of infections of the skin, respiratory tract and urinary tract.",,,,,,,,
http://purl.obolibrary.org/obo/IDO_0000416,infectious agent carrier role,,"An infectious agent host role borne by an organism in virtue of the fact that its extended organism contains an infectious agent, the infectious agent has the infectious disposition towards the host, and the host has no symptoms of the infectious disease caused by the infectious agent.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,IDO:0000416,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ido.owl,,,,,,,,,infectious agent carrier role,,,,,,,,,,,,,,,,,,,,,,,,,,,,Lindsay Cowell|Alexander Diehl|Albert Goldfain,,,,"An infectious agent host role borne by an organism in virtue of the fact that its extended organism contains an infectious agent, the infectious agent has the infectious disposition towards the host, and the host has no symptoms of the infectious disease caused by the infectious agent.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C27956,Infant,Infant|INFANT,An age group comprised of individuals between one month and two years of age.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Infant|INFANT,,,,NCIT:C27956,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Infant,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An age group comprised of individuals between one month and two years of age.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510205,source of fibre,,"A claim that a food is a source of fibre, and any claim likely to have the same meaning for the consumer, may only be made where the product contains at least 3 g of fibre per 100 g or at least 1,5 g of fibre per 100 kcal [REGULATION (EC) No 1924/2006 Corrigendum 2007-01-18].",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0205,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510205,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,source of fibre,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A claim that a food is a source of fibre, and any claim likely to have the same meaning for the consumer, may only be made where the product contains at least 3 g of fibre per 100 g or at least 1,5 g of fibre per 100 kcal [REGULATION (EC) No 1924/2006 Corrigendum 2007-01-18].",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02022266,animal breast (bone-in),,An animal breast that has the bone attached to it.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02022266,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,animal breast (bone-in),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An animal breast that has the bone attached to it.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490138,"laminate tube, unlined plastic ends",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0138,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490138,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"laminate tube, unlined plastic ends",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001976,clone end strategy,,"Clone end (5', 3', or both) sequencing.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI SRA: CLONEEND,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001976,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,clone end strategy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Clone end (5', 3', or both) sequencing.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C42614,Name,name|Name,The words or language units by which a thing is known.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,name|Name,,,,NCIT:C42614,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Name,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The words or language units by which a thing is known.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100628,host field,host slot; host organism field; host organism slot,A data item which describes an organism bearing a host role.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,(2026-02-28) Under review for deprecation.,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,host slot; host organism field; host organism slot,,,,GENEPIO:0100628,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788,2022-12-22T00:55:53.808Z,,,,,,,,,,,,,,,,,,,host field,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data item which describes an organism bearing a host role.,,,,,,,,
http://purl.obolibrary.org/obo/BFO_0000017,realizable entity,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,BFO:0000017,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl|http://purl.obolibrary.org/obo/cob.owl,,,,,,,,,realizable entity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00005593,ham steak,,An animal steak that comes from the hind leg of the pig (the ham).,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00005593,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,ham steak,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An animal steak that comes from the hind leg of the pig (the ham).,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C53547,Non-Neoplastic Disorder by Special Category,Non-Neoplastic Disorder by Special Category|Non-Neoplastic Disease by Special Category,"A term that refers to the classification of a non-neoplastic disorder as defined by unique characteristics that apply to its clinical presentation and course, frequency, and/or age distribution.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Non-Neoplastic Disorder by Special Category|Non-Neoplastic Disease by Special Category,,,,NCIT:C53547,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Non-Neoplastic Disorder by Special Category,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A term that refers to the classification of a non-neoplastic disorder as defined by unique characteristics that apply to its clinical presentation and course, frequency, and/or age distribution.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_25696,organic anion,,Any organic ion with a net negative charge.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:25696,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,organic anion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any organic ion with a net negative charge.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_35436,D-glucoside,,Any glucoside in which the glycoside group is derived from <small>D</small>-glucose.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:4173|CHEBI:21009,,,,,,CHEBI:35436,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,D-glucoside,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any glucoside in which the glycoside group is derived from <small>D</small>-glucose.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100313,vaccine name dose number,vaccination dose two vaccine name|vaccination dose three vaccine name|vaccination dose one vaccine name|vaccination dose four vaccine name|vaccination dose 4 vaccine name|vaccination dose 3 vaccine name|vaccination dose 2 vaccine name|vaccination dose 1 vaccine name|GENEPIO:0100319|GENEPIO:0100317|GENEPIO:0100315,A data field which describes the name of the vaccine administered as the first dose of a vaccine regimen.,FALSE,,,,,,,PCDS:vaccine_name_dose_*,,,,,,,PCDS: Provide the name of the Measles vaccine administered as the first dose.,,,,,,,,,,,,,,PCDS: ProQuad,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,vaccination dose two vaccine name|vaccination dose three vaccine name|vaccination dose one vaccine name|vaccination dose four vaccine name|vaccination dose 4 vaccine name|vaccination dose 3 vaccine name|vaccination dose 2 vaccine name|vaccination dose 1 vaccine name|GENEPIO:0100319|GENEPIO:0100317|GENEPIO:0100315,,,,GENEPIO:0100313,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,vaccine name dose number,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the name of the vaccine administered as the first dose of a vaccine regimen.,,PCDS: The name of the vaccine administered as the first dose of a vaccine regimen.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100356,retrospective sequencing strategy,,A sampling strategy in which stored samples from past events are sequenced.,FALSE,,,,,,,Retrospective sequencing,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100356,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-02-25T05:13:49.123Z,,,,,,,,,,,,,,,,,,,retrospective sequencing strategy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A sampling strategy in which stored samples from past events are sequenced.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020496,"turkey breast (skinless, raw)",,A raw skinless turkey breast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020496,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"turkey breast (skinless, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw skinless turkey breast.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100133,PacBio Sequel,,"A DNA sequencer built upon single molecule real-time sequencing technology, optimized for generation with long reads and high consensus accuracy, and manufactured by the Pacific Biosciences corporation",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100133,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,PacBio Sequel,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A DNA sequencer built upon single molecule real-time sequencing technology, optimized for generation with long reads and high consensus accuracy, and manufactured by the Pacific Biosciences corporation",,,,,,,,
http://purl.obolibrary.org/obo/HP_0002018,Nausea,Nausea,A sensation of unease in the stomach together with an urge to vomit.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0027497|SNOMEDCT_US:422587007|MEDDRA:10028813,,,,,,,,,,,,,,,,,,,,,,,,,Nausea,,,,HP:0002018,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,http://purl.oboInOwllibrary.org/oboInOwl/hp#hposlim_core,,,,,,,,Nausea,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A sensation of unease in the stomach together with an urge to vomit.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0002014,Diarrhea,Watery stool|Diarrhoea|Diarrhea,Abnormally increased frequency (usually defined as three or more) loose or watery bowel movements a day.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0011991|SNOMEDCT_US:62315008|SNOMEDCT_US:267060006,,,,,,,,,,,,,,,,,,,,,,,,,Watery stool|Diarrhoea|Diarrhea,,,,HP:0002014,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Diarrhea,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Abnormally increased frequency (usually defined as three or more) loose or watery bowel movements a day.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0002012,Abnormality of the abdominal organs,Gastrointestinal tract defects|Abnormality of the abdominal organs,An abnormality of the viscera of the abdomen.,FALSE,,,,,,,,,,,,,,"The abdominal organs comprise the stomach, small and large intestines, liver, pancreas, bile tract, and spleen.",,,,,,,,,,,,,,,,,,UMLS:C4021764,,,,,,,,,,,,,,,,,,,,,,,,,Gastrointestinal tract defects|Abnormality of the abdominal organs,,,,HP:0002012,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormality of the abdominal organs,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An abnormality of the viscera of the abdomen.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0002011,Morphological central nervous system abnormality,Morphological abnormality of the central nervous system|Morphological abnormality of the CNS|Abnormality of the central nervous system,A structural abnormality of the central nervous system.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4021765|UMLS:C0007682|SNOMEDCT_US:23853001,,,,,,,,,,,,,,,,,,,,,,,HP:0007319|HP:0002481|HP:0002413|HP:0002405,,Morphological abnormality of the central nervous system|Morphological abnormality of the CNS|Abnormality of the central nervous system,,,,HP:0002011,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Morphological central nervous system abnormality,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A structural abnormality of the central nervous system.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0002015,Dysphagia,Swallowing difficulty|Swallowing difficulties|Poor swallowing|Difficulty swallowing,Difficulty in swallowing.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0011168|SNOMEDCT_US:40739000|SNOMEDCT_US:288939007|MEDDRA:10013950,,,,,,,,,,,,,,,,,,,,,,,HP:0002569,,Swallowing difficulty|Swallowing difficulties|Poor swallowing|Difficulty swallowing,,,,HP:0002015,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,http://purl.oboInOwllibrary.org/oboInOwl/hp#hposlim_core,,,,,,,,Dysphagia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Difficulty in swallowing.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0002019,Constipation,Dyschezia|Costiveness|Constipation,Infrequent or difficult evacuation of feces.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0237326|UMLS:C0009806|SNOMEDCT_US:225595004|SNOMEDCT_US:14760008,,,,,,,,,,,,,,,,,,,,,,,HP:0003786|HP:0002241,,Dyschezia|Costiveness|Constipation,,,,HP:0002019,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Constipation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Infrequent or difficult evacuation of feces.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0002017,Nausea and vomiting,Nausea and vomiting,"Nausea is a commonly encountered symptom that has been defined as an unpleasant painless subjective feeling that one will imminently vomit. Vomiting has been defined as the forceful expulsion of the contents of the stomach, duodenum, or jejunum through the oral cavity. While nausea and vomiting are often thought to exist on a temporal continuum, this is not always the case. There are situations when severe nausea may be present without emesis and less frequently, when emesis may be present without preceding nausea.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0027498|SNOMEDCT_US:16932000,,,,,,,,,,,,,,,,,,,,,,,,,Nausea and vomiting,,,,HP:0002017,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Nausea and vomiting,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Nausea is a commonly encountered symptom that has been defined as an unpleasant painless subjective feeling that one will imminently vomit. Vomiting has been defined as the forceful expulsion of the contents of the stomach, duodenum, or jejunum through the oral cavity. While nausea and vomiting are often thought to exist on a temporal continuum, this is not always the case. There are situations when severe nausea may be present without emesis and less frequently, when emesis may be present without preceding nausea.",,,,,,,,
http://purl.obolibrary.org/obo/HP_0002013,Vomiting,Vomiting|Throwing up|Emesis,Forceful ejection of the contents of the stomach through the mouth by means of a series of involuntary spasmic contractions.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0042963|SNOMEDCT_US:422400008|SNOMEDCT_US:300359004|SNOMEDCT_US:249497008|MEDDRA:10047700,,,,,,,,,,,,,,,,,,,,,,,,,Vomiting|Throwing up|Emesis,,,,HP:0002013,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,http://purl.oboInOwllibrary.org/oboInOwl/hp#hposlim_core,,,,,,,,Vomiting,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Forceful ejection of the contents of the stomach through the mouth by means of a series of involuntary spasmic contractions.,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0021681,sexually transmitted disease,"venereal disease (VD)|sexually transmitted disease|sexually Transmitted disorder|disease (VD), venereal|VD, venereal disease|VD|STD",A Disease due to or propagated by sexual contact.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0036916|SCTID:8098009|NCIT:C3365|MESH:D012749|MEDGEN:11402|ICD9:099.9|ICD9:099.8|ICD10CM:A50-A64,,,,,,,,,,,,,,,,,,,,,,,,,"venereal disease (VD)|sexually transmitted disease|sexually Transmitted disorder|disease (VD), venereal|VD, venereal disease|VD|STD",,,,MONDO:0021681,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,sexually transmitted disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Disease due to or propagated by sexual contact.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000018,beef top round steak (cap off),,A beef top round steak in which the top cap portion has been separated off.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000018,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef top round steak (cap off),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A beef top round steak in which the top cap portion has been separated off.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C121303,Post Neonatal Death,Post Neonatal Death,Death between 28 days and 1 year of life.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Post Neonatal Death,,,,NCIT:C121303,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Post Neonatal Death,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Death between 28 days and 1 year of life.,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_363569,Salmonella enterica subsp. enterica serovar Javiana,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,Salmonella enterica subsp. enterica serovar Javiana,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:363569,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Salmonella enterica subsp. enterica serovar Javiana,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0101112,experimental specimen details,,,FALSE,,,,,,,PCDS:experimental_specimen_details,,,,,,,,,,,,,,,,,,,,,,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0101112,,,,,,,,,,,,,,2026-04-13T17:16:47.336Z,,,,,,,,,,,,,,,,,,,experimental specimen details,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03500011,beverage can enamel surface,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=N0011,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03500011,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beverage can enamel surface,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530206,food production,,"A planned process involving the rearing, manufacture or distribution of food material.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0206,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530206,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food production,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A planned process involving the rearing, manufacture or distribution of food material.",,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000348,maize field,,A field  used for the cultivation of corn or related crop plants.,FALSE,,,,,,,,,,,,,,Requested in Issue 112 as part of the curation of metagenome submissions in the European Nucleotide Archive.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01000348,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,maize field,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A field  used for the cultivation of corn or related crop plants.,,,,,,,,
http://purl.obolibrary.org/obo/SYMP_0000092,skin lesion,,A skin and integumentary tissue symptom that is characterized by an abnormal change in structure of the skin that is especially circumscribed and well defined due to injury or disease.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SYMP:0000092,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/symp.owl,,,,,,,,,skin lesion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A skin and integumentary tissue symptom that is characterized by an abnormal change in structure of the skin that is especially circumscribed and well defined due to injury or disease.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0002105,Hemoptysis,Haemoptysis|Coughing up blood,"Coughing up (expectoration) of blood or blood-streaked sputum from the larynx, trachea, bronchi, or lungs.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0019079|SNOMEDCT_US:6686005|SNOMEDCT_US:66857006,,,,,,,,,,,,,,,,,,,,,,,,,Haemoptysis|Coughing up blood,,,,HP:0002105,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Hemoptysis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Coughing up (expectoration) of blood or blood-streaked sputum from the larynx, trachea, bronchi, or lungs.",,,,,,,,
http://purl.obolibrary.org/obo/HP_0002103,Abnormal pleura morphology,Abnormality of the pleura,"An abnormality of the pulmonary pleura, the thin, transparent membrane which covers the lungs and lines the inside of the chest walls.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4025726,,,,,,,,,,,,,,,,,,,,,,,,,Abnormality of the pleura,,,,HP:0002103,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal pleura morphology,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An abnormality of the pulmonary pleura, the thin, transparent membrane which covers the lungs and lines the inside of the chest walls.",,,,,,,,
http://purl.obolibrary.org/obo/HP_0002108,Spontaneous pneumothorax,Spontaneous collapsed lung,Pneumothorax occurring without traumatic injury to the chest or lung.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0149781|SNOMEDCT_US:80423007,,,,,,,,,,,,,,,,,,,,,,,,,Spontaneous collapsed lung,,,,HP:0002108,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Spontaneous pneumothorax,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Pneumothorax occurring without traumatic injury to the chest or lung.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0002107,Pneumothorax,Collapsed lung,Accumulation of air in the pleural cavity leading to a partially or completely collapsed lung.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0032326|SNOMEDCT_US:36118008,,,,,,,,,,,,,,,,,,,,,,,,,Collapsed lung,,,,HP:0002107,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Pneumothorax,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Accumulation of air in the pleural cavity leading to a partially or completely collapsed lung.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000144,beef tenderloin steak (raw),,A raw beef tenderloin steak that may contain bone.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000144,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef tenderloin steak (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef tenderloin steak that may contain bone.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_37734,phosphoric ester,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:26019,,,,,,CHEBI:37734,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,phosphoric ester,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510118,naturally caffeine free claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0118,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510118,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,naturally caffeine free claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03460144,sodium added claim,,A claim that sodium has been added to an edible product.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=H0144,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03460144,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,sodium added claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A claim that sodium has been added to an edible product.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001968,metatranscriptomic source,,Transcription products from community targets,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI SRA: METATRANSCRIPTOMIC,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001968,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,metatranscriptomic source,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,Transcription products from community targets,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00002286,English Channel,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00002286,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,English Channel,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00002284,North Sea,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,INSDC:country:north sea,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00002284,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,North Sea,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00002287,Mediterranean Sea,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,INSDC:country:mediterranean sea,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00002287,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Mediterranean Sea,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00002285,Irish Sea,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00002285,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Irish Sea,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_genus,obsolete genus,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete genus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:genus,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,obsolete genus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/IDO_0000581,antibiotic resistance,,A resistance to drug that mitigates the damaging effects of an antibiotic.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,IDO:0000581,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ido.owl,,,,,,,,,antibiotic resistance,,,,,,,,,,,,,,,,,,,,,,,,,,,,Lindsay Cowell|Alexander Diehl|Albert Goldfain,,,,A resistance to drug that mitigates the damaging effects of an antibiotic.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0001637,Abnormal myocardium morphology,Abnormality of the myocardium,A structural anomaly of the muscle layer of the heart wall.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4025758,,,,,,,,,,,,,,,,,,,,,,,,,Abnormality of the myocardium,,,,HP:0001637,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal myocardium morphology,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A structural anomaly of the muscle layer of the heart wall.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0001635,Congestive heart failure,Heart failure|Chronic heart failure|Cardiac insufficiency|Cardiac failures|Cardiac failure|CHF,The presence of an abnormality of cardiac function that is responsible for the failure of the heart to pump blood at a rate that is commensurate with the needs of the tissues or a state in which abnormally elevated filling pressures are required for the heart to do so. Heart failure is frequently related to a defect in myocardial contraction.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0018802|UMLS:C0018801|SNOMEDCT_US:84114007|SNOMEDCT_US:42343007,,,,,,,,,,,,,,,,,,,,,,,HP:0006686,,Heart failure|Chronic heart failure|Cardiac insufficiency|Cardiac failures|Cardiac failure|CHF,,,,HP:0001635,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Congestive heart failure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The presence of an abnormality of cardiac function that is responsible for the failure of the heart to pump blood at a rate that is commensurate with the needs of the tissues or a state in which abnormally elevated filling pressures are required for the heart to do so. Heart failure is frequently related to a defect in myocardial contraction.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0001638,Cardiomyopathy,Disease of the heart muscle,"A myocardial disorder in which the heart muscle is structurally and functionally abnormal, in the absence of coronary artery disease, hypertension, valvular disease and congenital heart disease sufficient to cause the observed myocardial abnormality.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0878544|SNOMEDCT_US:85898001|SNOMEDCT_US:57809008|Fyler:1840,,,,,,,,,,,,,,,,,,,,,,,,,Disease of the heart muscle,,,,HP:0001638,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Cardiomyopathy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A myocardial disorder in which the heart muscle is structurally and functionally abnormal, in the absence of coronary artery disease, hypertension, valvular disease and congenital heart disease sufficient to cause the observed myocardial abnormality.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C98904,Connective and Soft Tissue Injury,Unspecified Tissue Injury|Connective and Soft Tissue Injury,"Damage inflicted on the soft tissues and their supporting structures as the direct or indirect result of an external force, with or without disruption of structural continuity.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Unspecified Tissue Injury|Connective and Soft Tissue Injury,,,,NCIT:C98904,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Connective and Soft Tissue Injury,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Damage inflicted on the soft tissues and their supporting structures as the direct or indirect result of an external force, with or without disruption of structural continuity.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100612,input gene sequence length measurement datum,,A sequence length measurement datum which describes the number of base pairs of a gene of interest undergoing analysis.,FALSE,,,,,,,input gene length,,,,,,,,,,,,,,Emma Griffiths,,,,,input gene sequence length measurement datum,,1802bp,,,ready for release,http://purl.obolibrary.org/obo/OBI_0002891,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100612,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,input gene sequence length measurement datum,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-1107-9135,,,https://github.com/obi-ontology/obi/issues/1579,A sequence length measurement datum which describes the number of base pairs of a gene of interest undergoing analysis.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0002076,Migraine,Migraine headaches|Migraine headache|Migraine|Intermittent migraine headaches,Migraine is a chronic neurological disorder characterized by episodic attacks of headache and associated symptoms.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0744641|UMLS:C0149931|SNOMEDCT_US:37796009,,,,,,,,,,,,,,,,,,,,,,,HP:0007194,,Migraine headaches|Migraine headache|Migraine|Intermittent migraine headaches,,,,HP:0002076,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Migraine,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Migraine is a chronic neurological disorder characterized by episodic attacks of headache and associated symptoms.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C3079,Heart Disorder,Unspecified Heart Problem|Heart trouble|Heart Disorder|Heart Disease|Cardiac Disease,"A non-neoplastic or neoplastic disorder that affects the heart and/or the pericardium. Representative examples include endocarditis, pericarditis, atrial myxoma, cardiac myeloid sarcoma, and pericardial malignant mesothelioma.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Unspecified Heart Problem|Heart trouble|Heart Disorder|Heart Disease|Cardiac Disease,,,,NCIT:C3079,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Heart Disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A non-neoplastic or neoplastic disorder that affects the heart and/or the pericardium. Representative examples include endocarditis, pericarditis, atrial myxoma, cardiac myeloid sarcoma, and pericardial malignant mesothelioma.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_11055,pasteurellosis,,"A primary bacterial infectious disease that results_in systemic infection, has_material_basis_in Pasteurella multocida, which is transmitted_by animal bite, scratch, or lick. The infection has_symptom joint pain has_symptom fever, has_symptom rigors, has_symptom pneumonia, has_symptom meningeal irritation, and has_symptom tachycardia.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:11055,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,pasteurellosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A primary bacterial infectious disease that results_in systemic infection, has_material_basis_in Pasteurella multocida, which is transmitted_by animal bite, scratch, or lick. The infection has_symptom joint pain has_symptom fever, has_symptom rigors, has_symptom pneumonia, has_symptom meningeal irritation, and has_symptom tachycardia.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00001181,food (cooked),,Food material which is cooked.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00001181,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food (cooked),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Food material which is cooked.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100594,obsolete: specimen storage location,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,Rehomed in OBIB,,,,,,,,,,,,,,,,,,,GENEPIO:0100594,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: specimen storage location,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/OBIB_0002015,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_5880,Imipenem-cilastatin,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:5880,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,Imipenem-cilastatin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00007508,"populated place, Saudi Arabia",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00007508,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Saudi Arabia",http://purl.obolibrary.org/obo/GAZ_00005279,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00007509,Province (Saudi Arabia),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00007509,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Province (Saudi Arabia),http://purl.obolibrary.org/obo/GAZ_00005279,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00003096,tap water,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Tap_water,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00003096,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,tap water,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ICO_0000288,pregnant woman,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ICO:0000288,,,,,,,,,,,,,,2020-04-24T22:38:17Z,,,,,,,,,,,,,,,,,,,pregnant woman,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://orcid.org/0000-0002-8844-9165,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C49844,Belt Device,Belt Device|Belt,A device consisting of a narrow loop of material moving over shafts or pulleys.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Belt Device|Belt,,,,NCIT:C49844,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Belt Device,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A device consisting of a narrow loop of material moving over shafts or pulleys.,,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000221,random variable,,"a random variable (or aleatory variable or stochastic variable) in probability and statistics,  is a variable whose value is subject to variations due to chance (i.e. randomness, in a mathematical sense)",FALSE,,,,,,,stochastic variable|aleatory variable,,,,,,,,,,,,,,"wikipedia:
http://en.wikipedia.org/wiki/Random_variable",,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000221,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,random variable,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra|Alejandra Gonzalez-Beltran|Orlaith Burke,,,,"a random variable (or aleatory variable or stochastic variable) in probability and statistics,  is a variable whose value is subject to variations due to chance (i.e. randomness, in a mathematical sense)",,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000246,village biome,,"A village biome is an anthropogenic terrestrial biome which contains settlements such as villages, towns, and/or small cities and which is primarily used for agricultural activity.",FALSE,,,,,,,,,,,,,,"Villages are also described as agricultural settlements with greater than 100 persons per square kilometre; however, no upper limit is defined.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01000246,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,village biome,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A village biome is an anthropogenic terrestrial biome which contains settlements such as villages, towns, and/or small cities and which is primarily used for agricultural activity.",,,,,,,,
http://purl.obolibrary.org/obo/HP_0011947,Respiratory tract infection,Respiratory tract infection|Respiratory infection,An infection of the upper or lower respiratory tract.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0035243|SNOMEDCT_US:275498002,,,,,,,,,,,,,,,,,,,,,,,,,Respiratory tract infection|Respiratory infection,,,,HP:0011947,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Respiratory tract infection,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An infection of the upper or lower respiratory tract.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0005208,Secretory diarrhea,Secretory diarrhoea,Watery voluminous diarrhea resulting from an imbalance between ion and water secretion and absorption.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0267557|SNOMEDCT_US:15699003,,,,,,,,,,,,,,,,,,,,,,,,,Secretory diarrhoea,,,,HP:0005208,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Secretory diarrhea,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Watery voluminous diarrhea resulting from an imbalance between ion and water secretion and absorption.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00003861,industrial building,,"An industrial building is a building within which goods are produced and, optionally, stored or within which services are rendered.",FALSE,,,,,,,,,,,,,,It's possible that this will become an inferred class in the future. The United Nations' International Standard Industrial Classification should be referred to when expanding this branch. ISIC can also be used to identify processes. See http://unstats.un.org/unsd/cr/registry/regcst.asp?Cl=27&Lg=1.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00003861,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,industrial building,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An industrial building is a building within which goods are produced and, optionally, stored or within which services are rendered.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100636,antimicrobial resistance field,antimicrobial resistance slot|AMR slot|AMR field,A data field which describes antimicrobial resistance information.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,antimicrobial resistance slot|AMR slot|AMR field,,,,GENEPIO:0100636,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788,2022-12-22T00:55:53.808Z,,,,,,,,,,,,,,,,,,,antimicrobial resistance field,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes antimicrobial resistance information.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0002715,Abnormality of the immune system,Immunological abnormality|Abnormality of the immune system,An abnormality of the immune system.,FALSE,,,,,,,,,,,,,,"The immune system is composed of organs and interdependent cell types that collectively protect the body from infections and from the growth of tumor cells. The organs of the immune system comprise the bone marrow, the spleen, the thymus,the lymph nodes, and the cell types comprise B cells, T cells, natural killer cells, granulocytes,dendritic cells, and macrophages.",,,,,,,,,,,,,,,,,,UMLS:C4021753,,,,,,,,,,,,,,,,,,,,,,,HP:0010986|HP:0003346|HP:0003257,,Immunological abnormality|Abnormality of the immune system,,,,HP:0002715,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormality of the immune system,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An abnormality of the immune system.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0002716,Lymphadenopathy,Swollen lymph nodes|Lymph node hyperplasia,Enlargement (swelling) of a lymph node.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0497156|SNOMEDCT_US:30746006,,,,,,,,,,,,,,,,,,,,,,,HP:0002735,,Swollen lymph nodes|Lymph node hyperplasia,,,,HP:0002716,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Lymphadenopathy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Enlargement (swelling) of a lymph node.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001712,Smal,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001712,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Smal,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510136,food consumer group,,A food consumer group is a class of organism based on their heterotrophic requirements or preferences.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0136,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510136,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food consumer group,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A food consumer group is a class of organism based on their heterotrophic requirements or preferences.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000090,beef chuck short rib (raw),,A raw beef chuck short rib.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000090,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef chuck short rib (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef chuck short rib.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_35313,hexoside,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:35313,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,hexoside,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100067,ground glass opacities,GGO,"Focal or diffuse areas of ill-defined, hazy, increased lung attenuation, which cause pulmonary vascular indistinctness, yet through which vessels can still be identified via high-resolution computed tomography or the conventional radiograph.",FALSE,,,,,,,Ground Glass Opacities (GGO),,,,,,,,,,,,,,PMID: 12465687,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,GGO,,,,GENEPIO:0100067,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,ground glass opacities,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Focal or diffuse areas of ill-defined, hazy, increased lung attenuation, which cause pulmonary vascular indistinctness, yet through which vessels can still be identified via high-resolution computed tomography or the conventional radiograph.",,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00005322,"populated place, Surinam",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00005322,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Surinam",http://purl.obolibrary.org/obo/GAZ_00002525,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490429,recycled paperboard container,,Example: egg box.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0429,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490429,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,recycled paperboard container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Example: egg box.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001701,listeria serotype 4e,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001701,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,listeria serotype 4e,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510266,infant as food consumer,,The term infant is typically applied to young children between the ages of 1 month and 12 months. [http://en.wikipedia.org/wiki/Infant],FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0266,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510266,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,infant as food consumer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The term infant is typically applied to young children between the ages of 1 month and 12 months. [http://en.wikipedia.org/wiki/Infant],,,,,,,,
http://purl.obolibrary.org/obo/OMIT_0020789,Disease Attributes,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OMIT:0020789,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/omit.owl,,,,,,,,,Disease Attributes,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00002810,Province (Republic of South Africa),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00002810,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Province (Republic of South Africa),http://purl.obolibrary.org/obo/GAZ_00001094,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C94631,Antiretroviral Therapy,antiretroviral therapy|Antiretroviral Therapy|Anti-retroviral therapy|Anti-Retroviral Therapy|ART,"Treatment of retroviral infections with medications that target the virus directly, limiting the ability of infected cells to produce new virus particles.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,antiretroviral therapy|Antiretroviral Therapy|Anti-retroviral therapy|Anti-Retroviral Therapy|ART,,,,NCIT:C94631,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Antiretroviral Therapy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Treatment of retroviral infections with medications that target the virus directly, limiting the ability of infected cells to produce new virus particles.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100482,stage of production,stage_of_production|stage of production,A data field which describes the stage of food production.,FALSE,,,,,,,PCDS:stage_of_production,,,,,,,PCDS: Provide the stage of food production as free text.,,,,,,,,,,,,,,PCDS: Abattoir [ENVO:01000925],,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,stage_of_production|stage of production,stage of production slot,,,,GENEPIO:0100482,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-12-22T00:55:53.808Z,,,,,,,,,,,,,,,,,,,stage of production,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the stage of food production.,,PCDS: The stage of food production.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001578,model organism relevance,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001578,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,model organism relevance,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://www.ebi.ac.uk/efo/EFO_0000409,disease free survival,morbidity-free survival|Disease-Free Survival,A temporal measurement of the period after successful treatment in which there is no appearance of the symptoms or effects of the disease.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MESH:D018572,,,,,,,,,,,,,,,,,,,,,,,,,morbidity-free survival|Disease-Free Survival,,,,efo:EFO_0000409,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,disease free survival,,,,,,,,,,,,,,,,,,,,,,,,,,,,James Malone,,,,A temporal measurement of the period after successful treatment in which there is no appearance of the symptoms or effects of the disease.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001442,exposure group healthy count,,The count of healthy individuals or animals on a certain date/time from a group that was likely exposed to a pathogen,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001442,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,exposure group healthy count,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,The count of healthy individuals or animals on a certain date/time from a group that was likely exposed to a pathogen,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490366,linear polyester container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0366,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490366,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,linear polyester container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002051,obsolete: Phoenix,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002051,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: Phoenix,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ARO_3004401,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000601,motor vehicle,,A motor vehicle is a vehicle which is propelled by an engine or motor and that does not operate on rails.,FALSE,,,,,,,,,,,,,,Subclasses will be added by inference.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01000601,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,motor vehicle,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A motor vehicle is a vehicle which is propelled by an engine or motor and that does not operate on rails.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0008047,Abnormality of the vasculature of the eye,Abnormality of eye blood vessels,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4024752,,,,,,,,,,,,,,,,,,,,,,,,,Abnormality of eye blood vessels,,,,HP:0008047,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormality of the vasculature of the eye,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_472657,cefixime,,"A third-generation cephalosporin antibiotic bearing vinyl and (2<i>Z</i>)-2-(2-amino-1,3-thiazol-4-yl)-2-[(carboxymethoxy)imino]acetamido groups at positions 3 and 7, respectively, of the cephem skeleton. It is used in the treatment of gonorrhoea, tonsilitis, pharyngitis, bronchitis, and urinary tract infections.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:3487,,,,,,CHEBI:472657,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,cefixime,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A third-generation cephalosporin antibiotic bearing vinyl and (2<i>Z</i>)-2-(2-amino-1,3-thiazol-4-yl)-2-[(carboxymethoxy)imino]acetamido groups at positions 3 and 7, respectively, of the cephem skeleton. It is used in the treatment of gonorrhoea, tonsilitis, pharyngitis, bronchitis, and urinary tract infections.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490417,polyester textile container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0417,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490417,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,polyester textile container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_02000055,plant feed,,Food material which can be used to meet nutritional requirements of plants.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:02000055,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,plant feed,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Food material which can be used to meet nutritional requirements of plants.,,,,,,,,
http://purl.obolibrary.org/obo/VO_0004921,human age,,"The human age is classified into four categories as Child (0-12 years), Adolescence (13-18 years), Adult (19-59 years) and Senior Adult (60 years and above) which is discussed in the paper. Reference: https://ieeexplore.ieee.org/abstract/document/6416855.",FALSE,,,,,,,,,,,,,,"The human age is classified into four categories as Child (0-12 years), Adolescence (13-18 years), Adult (19-59 years) and Senior Adult (60 years and above) which is discussed in the paper. Reference: https://ieeexplore.ieee.org/abstract/document/6416855.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,VO:0004921,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/vo.owl,quality,,,,,,,,human age,,,,,,,,,,,,,,,,,,,,,,,,,,,,Oliver He|Anthony Huffman|Anna Maria Masci,,,,,,,,,,,,
http://purl.obolibrary.org/obo/VO_0004925,senior age,,"The human age is classified into four categories as Child (0-12 years), Adolescence (13-18 years), Adult (19-59 years) and Senior Adult (60 years and above) which is discussed in the paper. Reference: https://ieeexplore.ieee.org/abstract/document/6416855.",FALSE,,,,,,,,,,,,,,"The human age is classified into four categories as Child (0-12 years), Adolescence (13-18 years), Adult (19-59 years) and Senior Adult (60 years and above) which is discussed in the paper. Reference: https://ieeexplore.ieee.org/abstract/document/6416855.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,VO:0004925,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/vo.owl,quality,,,,,,,,senior age,,,,,,,,,,,,,,,,,,,,,,,,,,,,Oliver He|Anthony Huffman|Anna Maria Masci,,,,,,,,,,,,
http://purl.obolibrary.org/obo/IDO_0000515,normal resident microbiota population,,An organism population whose members are participating in non-parasitic symbiosis with a particular host.,FALSE,,,,,,,normal resident microflora population,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,IDO:0000515,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ido.owl,,,,,,,,,normal resident microbiota population,,,,,,,,,,,,,,,,,,,,,,,,,,,,Lindsay Cowell|Alexander Diehl|Albert Goldfain,,,,An organism population whose members are participating in non-parasitic symbiosis with a particular host.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C16866,Model,model|Models|Modeling System|Model System|Model,"A representation of something, often idealized or modified to make it conceptually easier to understand.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,model|Models|Modeling System|Model System|Model,,,,NCIT:C16866,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Model,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A representation of something, often idealized or modified to make it conceptually easier to understand.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_15986,polynucleotide,,A nucleobase-containing molecular entity with a polymeric structure comprised of a linear sequence of 13 or more nucleotide residues.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:8312|CHEBI:14859|CHEBI:13672,,,,,,CHEBI:15986,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,polynucleotide,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A nucleobase-containing molecular entity with a polymeric structure comprised of a linear sequence of 13 or more nucleotide residues.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_1679,cystitis,,A bladder disease that is characterized by inflammation of the bladder.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:1679,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,cystitis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A bladder disease that is characterized by inflammation of the bladder.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100262,laboratory worker role,,A role inhering in a person that is realized when the bearer is an employee that performs labor in a laboratory.,FALSE,,,,,,,Laboratory Worker,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100262,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,laboratory worker role,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A role inhering in a person that is realized when the bearer is an employee that performs labor in a laboratory.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00004095,Province (Armenia),,Villages and Cities from SALB; divided into communities from http://www.armstat.am/en/?nid=52.,FALSE,,,,,,,,,,,,,,Villages and Cities from SALB; divided into communities from http://www.armstat.am/en/?nid=52.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00004095,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Province (Armenia),http://purl.obolibrary.org/obo/GAZ_00004094,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00004098,"populated place, Armenia",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00004098,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Armenia",http://purl.obolibrary.org/obo/GAZ_00004094,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CLO_0000714,immortal rhesus macaque kidney-derived cell line cell,,An immortal kidney-derived cell line cell that derives from rhesus macaque.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CLO:0000714,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/clo.owl,,,,,,,,,immortal rhesus macaque kidney-derived cell line cell,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Yue Liu, Yongqun He",,,,An immortal kidney-derived cell line cell that derives from rhesus macaque.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002159,specimen identifier specification,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002159,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,specimen identifier specification,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/OBI_0001616,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00007191,Wallis and Futuna Islands,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,INSDC:country:wallis and futuna,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00007191,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Wallis and Futuna Islands,http://purl.obolibrary.org/obo/GAZ_00007192,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_85595,disk-diffusion method,Kirby-Bauer disk assay,"A method to determine microbial susceptibility to antibiotics wherein bacteria are inoculated onto agar plates and the antimicrobial agent diffused onto the agar plate from a filter paper disk. An approximate, but not exact, MIC is determined by the diameter of growth inhibition zones. This method has been found to have good correlation between in-vivo data and in-vitro data.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Kirby-Bauer disk assay,,,,NCIT:85595,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/aro.owl,,,,,,,,,disk-diffusion method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A method to determine microbial susceptibility to antibiotics wherein bacteria are inoculated onto agar plates and the antimicrobial agent diffused onto the agar plate from a filter paper disk. An approximate, but not exact, MIC is determined by the diameter of growth inhibition zones. This method has been found to have good correlation between in-vivo data and in-vitro data.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_85596,antimicrobial gradient method (E-test),,A method to determine microbial susceptibility to antibiotics in which a plastic strip impregnated with the antibiotic of interest is placed on an agar plate that has been inoculated with bacteria. The antibiotic diffuses from the strip producing a concentration gradient of drug on the agar. The point at which the elliptical shaped area of growth inhibition meets the strip is the minimum inhibitory concentration of the drug of interest.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCIT:85596,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/aro.owl,,,,,,,,,antimicrobial gradient method (E-test),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A method to determine microbial susceptibility to antibiotics in which a plastic strip impregnated with the antibiotic of interest is placed on an agar plate that has been inoculated with bacteria. The antibiotic diffuses from the strip producing a concentration gradient of drug on the agar. The point at which the elliptical shaped area of growth inhibition meets the strip is the minimum inhibitory concentration of the drug of interest.,,,,,,,,
http://purl.obolibrary.org/obo/OBA_2055791,age of onset of lung disorder,age lung disorder symptoms begin|age at onset of lung disorder,The age at which lung disorder manifestations first appear.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,age lung disorder symptoms begin|age at onset of lung disorder,,,,OBA:2055791,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age of onset of lung disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The age at which lung disorder manifestations first appear.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000160,beef culotte roast (raw),,A raw beef culotte roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000160,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef culotte roast (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef culotte roast.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001439,prior sarscov2 antiviral treatment agent,prior SARS-CoV-2 antiviral treatment agent,A data field which describes the name of the antiviral treatment agent administered during the prior Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection.,FALSE,,,,,,,PCDS:prior_sarscov2_antiviral_treatment_agent,,,,,,,"PCDS: Provide the name of the antiviral treatment agent administered during the most recent prior infection. If no treatment was administered, put 'No treatment'. If multiple antiviral agents were administered, list them all separated by commas.",,,,,,,,,,,,,,PCDS: Remdesivir,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,prior SARS-CoV-2 antiviral treatment agent,prior SARS-CoV-2 antiviral treatment agent slot,,,,GENEPIO:0001439,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,prior sarscov2 antiviral treatment agent,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the name of the antiviral treatment agent administered during the prior Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection.,,PCDS: The name of the antiviral treatment agent administered during the prior SARS-CoV-2 infection.,,,,,,
http://purl.obolibrary.org/obo/HP_0034782,Obstipation,No gas passage|Lack of flatulence,Obstipation is the inability to pass either stool or flatus (gas).,FALSE,,,,,,,,,,,,,,"Obstipation can be a sign of an acute obstruction of the GI tract, either of the small or large bowel.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,No gas passage|Lack of flatulence,,,,HP:0034782,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Obstipation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Obstipation is the inability to pass either stool or flatus (gas).,,,,,,,,
http://purl.obolibrary.org/obo/HP_0034783,Posttussive emesis,,Vomiting following a coughing spell.,FALSE,,,,,,,,,,,,,,Individuals with gastroesophageal reflux disease (GERD) will frequently vomit when coughing for a non-GI reason. Vomiting occurs during these coughing spells because the intrabdominal pressure is high from the coughing and the propensity to reflux results in stomach contents emerging as vomit. This is a historical question that allows a parent to impart information suggesting GERD at an age when it is difficult to obtain a reliable GERD history from the child.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0034783,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Posttussive emesis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Vomiting following a coughing spell.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_8732,Quinupristin,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:8732,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,Quinupristin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_8733,Quinupristin-dalfopristin,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:8733,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,Quinupristin-dalfopristin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100136,Ion Torrent PGM,,A DNA sequencer manufactured by the Ion Torrent corporation which utilizes Ion semiconductor sequencing and has an output capacity of 300 MB - 1GB.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100136,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,Ion Torrent PGM,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A DNA sequencer manufactured by the Ion Torrent corporation which utilizes Ion semiconductor sequencing and has an output capacity of 300 MB - 1GB.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100016,surveillance of international border crossing by air travel strategy,,An international travel-associated surveillance strategy in which individuals are selected if they have a travel history of crossing an international border via air travel.,FALSE,,,,,,,Surveillance of international border crossing by air travel,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100016,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,surveillance of international border crossing by air travel strategy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An international travel-associated surveillance strategy in which individuals are selected if they have a travel history of crossing an international border via air travel.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490277,"glass container, uncoloured, covered/protected",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0277,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490277,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"glass container, uncoloured, covered/protected",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510023,dietary claim,,"Renamed from *FOOD FOR SPECIAL DIETARY USE* [LanguaL 2008].

These descriptors are used either for foods intended for special dietary use as defined in 21 CFR 105 or for foods that have special characteristics indicated in the name or labeling. Such claims would include 'low calorie', 'low cholesterol', 'diet' or 'dietetic', etc. Prior to february 1992, this category of descriptors was limited solely to food for adult humans. The category is now used in conjunction with any appropriate *CONSUMER GROUP* descriptor(s), for example, 'low sugar baby food' would be indexed by *INFANT OR TODDLER FOOD* as well as by *LOW SUGARS FOOD*.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0032|http://www.langual.org/langual_thesaurus.asp?termid=P0023,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510023,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,dietary claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Renamed from *FOOD FOR SPECIAL DIETARY USE* [LanguaL 2008].

These descriptors are used either for foods intended for special dietary use as defined in 21 CFR 105 or for foods that have special characteristics indicated in the name or labeling. Such claims would include 'low calorie', 'low cholesterol', 'diet' or 'dietetic', etc. Prior to february 1992, this category of descriptors was limited solely to food for adult humans. The category is now used in conjunction with any appropriate *CONSUMER GROUP* descriptor(s), for example, 'low sugar baby food' would be indexed by *INFANT OR TODDLER FOOD* as well as by *LOW SUGARS FOOD*.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_35681,secondary alcohol,,"A secondary alcohol is a compound in which a hydroxy group, ‒OH, is attached to a saturated carbon atom which has two other carbon atoms attached to it.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:9077|CHEBI:8741|CHEBI:58662|CHEBI:26617|CHEBI:16339|CHEBI:13686|CHEBI:13425,,,,,,CHEBI:35681,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,secondary alcohol,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A secondary alcohol is a compound in which a hydroxy group, ‒OH, is attached to a saturated carbon atom which has two other carbon atoms attached to it.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00005689,swine material,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00005689,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,swine material,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0712,Cambodian in Cambodia (HGDP),Cambodian,A population made up of 9 samples from Cambodian individuals recruited in Cambodia as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Cambodian,,,,HANCESTRO:0712,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Cambodian in Cambodia (HGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 9 samples from Cambodian individuals recruited in Cambodia as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0717,Japanese in Japan (HGDP),Japanese,A population made up of 27 samples from Japanese individuals recruited in Japan as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Japanese,,,,HANCESTRO:0717,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Japanese in Japan (HGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 27 samples from Japanese individuals recruited in Japan as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0714,Daur in China (HGDP),Daur,A population made up of 9 samples from Daur individuals recruited in China as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Daur,,,,HANCESTRO:0714,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Daur in China (HGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 9 samples from Daur individuals recruited in China as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0719,Miao in China (HGDP),Miao,A population made up of 8 samples from Miao individuals recruited in China as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Miao,,,,HANCESTRO:0719,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Miao in China (HGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 8 samples from Miao individuals recruited in China as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0710,Sindhi in Pakistan (HGDP),Sindhi,A population made up of 22 samples from Sindhi individuals recruited in Pakistan as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Central South Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Sindhi,,,,HANCESTRO:0710,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Sindhi in Pakistan (HGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 22 samples from Sindhi individuals recruited in Pakistan as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Central South Asian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0718,Lahu in China (HGDP),Lahu,A population made up of 6 samples from Lahu individuals recruited in China as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Lahu,,,,HANCESTRO:0718,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Lahu in China (HGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 6 samples from Lahu individuals recruited in China as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0711,Uygur in China (HGDP),Uygur,A population made up of 8 samples from Uygur individuals recruited in China as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Central South Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Uygur,,,,HANCESTRO:0711,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Uygur in China (HGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 8 samples from Uygur individuals recruited in China as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Central South Asian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0716,Hezhen in China (HGDP),Hezhen,A population made up of 7 samples from Hezhen individuals recruited in China as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Hezhen,,,,HANCESTRO:0716,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Hezhen in China (HGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 7 samples from Hezhen individuals recruited in China as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0713,Dai in China (HGDP),Dai,A population made up of 5 samples from Dai individuals recruited in China as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Dai,,,,HANCESTRO:0713,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Dai in China (HGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 5 samples from Dai individuals recruited in China as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0715,Han in China (HGDP),Han,A population made up of 30 samples from Han individuals recruited in China as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Han,,,,HANCESTRO:0715,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Han in China (HGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 30 samples from Han individuals recruited in China as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_26835,sulfur molecular entity,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:26835,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,sulfur molecular entity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001612,draft IRIDA BioSample model,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001612,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,draft IRIDA BioSample model,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_1091,tooth disease,,A mouth disease located_in the teeth.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:1091,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,tooth disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A mouth disease located_in the teeth.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490202,container or wrapping by material,,Classification corresponding to FSTA Thesaurus Packaging 2.1.2 Material,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0202,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490202,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,container or wrapping by material,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Classification corresponding to FSTA Thesaurus Packaging 2.1.2 Material,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C20108,Country Code,countryCode|Country Identifier|Country Code|Country,"An alphanumeric system designed to identify countries. The ISO 3166 standard includes a two letter representation, a three letter representation, and a 3 number representation. The last two are identical to the UN system. The US State Department system maintains a separate two letter representation code set.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,countryCode|Country Identifier|Country Code|Country,,,,NCIT:C20108,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Country Code,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An alphanumeric system designed to identify countries. The ISO 3166 standard includes a two letter representation, a three letter representation, and a 3 number representation. The last two are identical to the UN system. The US State Department system maintains a separate two letter representation code set.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100909,instantaneous flow rate measurement unit,instantaneous flow rate measurement unit,An environmental data field which describes the units of a measured instantaneous fluid flow rate.,FALSE,,,,,,,PCDS:instantaneous_flow_rate_measurement_unit,,,,,,,PCDS: Provide the units of the measured flow rate by selecting a value from the pick list.,,,,,,,,,,,,,,PCDS: cubic meter per hour (m^3/h),,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,instantaneous flow rate measurement unit,instantaneous flow rate measurement unit slot,,,,GENEPIO:0100909,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,instantaneous flow rate measurement unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the units of a measured instantaneous fluid flow rate.,,PCDS: The units of a measured instantaneous fluid flow rate.,,,,,,
http://purl.obolibrary.org/obo/HP_0025085,Bloody diarrhea,Bloody stool|Blood in stool,Passage of many stools containing blood.,FALSE,,,,,,,,,,,,,,"Diarrhea that contains bright red or maroon-colored blood may be referred to as hematochezia, while melena is used to describe black, tarry, and smelly diarrhea.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Bloody stool|Blood in stool,Bloody diarrhea|Bloody bowel movement,,,,HP:0025085,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Bloody diarrhea,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Passage of many stools containing blood.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0025086,Bloody mucoid diarrhea,Bloody mucoid diarrhea,Passage of many stools containing blood and mucus.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Bloody mucoid diarrhea,,,,HP:0025086,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Bloody mucoid diarrhea,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Passage of many stools containing blood and mucus.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0025089,Feculent vomiting,Vomiting fecal matter|Vomiting faecal matter|Stercoraceous vomiting|Fecal vomiting|Faecal vomiting,Vomiting of material that is of fecal origin.,FALSE,,,,,,,,,,,,,,Feculent vomiting is usually due to mechanical intestinal obstruction but it can be due to paralytic obstruction (adynamic ileus).,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Vomiting fecal matter|Vomiting faecal matter|Stercoraceous vomiting|Fecal vomiting|Faecal vomiting,,,,HP:0025089,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Feculent vomiting,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Vomiting of material that is of fecal origin.,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_1643390,Mus musculus helgolandicus,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,Mus musculus helgolandicus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:1643390,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Mus musculus helgolandicus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100721,microbiological identification tag (ViTek),microbiological identification data type (ViTek),A microbiological characterization data tag which indicates the presence of microbiological identification data derived using the ViTek identification system.,FALSE,,,,,,,microbiological identification (ViTek),,,,,,,Example Guidance: Use this tag to indicate additional data is available that provides identification information from microbiology properties generated using ViTek.,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,microbiological identification data type (ViTek),,,,GENEPIO:0100721,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-05-18T19:08:34.869Z,,,,,,,,,,,,,,,,,,,microbiological identification tag (ViTek),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A microbiological characterization data tag which indicates the presence of microbiological identification data derived using the ViTek identification system.,,,,,,,,
http://www.ebi.ac.uk/efo/EFO_0004704,age at menopause,,"The age of onset of (human) menopause, the beginning of the first menstrual cycle in an individual",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCIt:C106497,,,,,,,,,,,,,,,,,,,,,,,,,,,,,efo:EFO_0004704,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age at menopause,,,,,,,,,,,,,,,,,,,,,,,,,,,,Helen Parkinson,,,,"The age of onset of (human) menopause, the beginning of the first menstrual cycle in an individual",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100303,person role enumeration,,A data enumeration which references a set of named person role entities.,FALSE,,,,,,,host role,,,,,,,,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100303,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165,,,,,,,,,,,,,,,,,,,,person role enumeration,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data enumeration which references a set of named person role entities.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C125203,Transplant-Related Mortality,Transplant-Related Mortality|Transplant-Related Death|Transplant Related Mortality|Transplant Related Death|TRM,Death due to complications following an organ transplant.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Transplant-Related Mortality|Transplant-Related Death|Transplant Related Mortality|Transplant Related Death|TRM,,,,NCIT:C125203,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Transplant-Related Mortality,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Death due to complications following an organ transplant.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000067,cave,,"Naturally formed, subterranean open area or chamber.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Cave|TGN:21486|TGN:21485|SWEETRealm:Cave|Geonames:S.CAVE|FTT:447|FTT:446|FTT:445|FTT:443|FTT:1071,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00000067,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,cave,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Naturally formed, subterranean open area or chamber.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_35496,fluorobenzenes,,Any fluoroarene that is a benzene or a substituted benzene carrying at least one fluoro group.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:35496,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,fluorobenzenes,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any fluoroarene that is a benzene or a substituted benzene carrying at least one fluoro group.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000026,subject health status at time of specimen collection,,Health or disease status of a given subject at time of specimen collection.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,Currently this does not differ from the 'subject health status (GSCID-BRC)' item. It may be revised to have more options in the future.,,,diseased,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000026,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,subject health status at time of specimen collection,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,Health or disease status of a given subject at time of specimen collection.,,,"order:
NCIT:C115935 # healthy
NCIT:C25610 # pathologic
NCIT:C28554 # deceased|depth:1",,,,,
http://purl.obolibrary.org/obo/FOODON_00001134,bovine meat food product,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00001134,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,bovine meat food product,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00003390,controlled environment agriculture (CEA) production,,A technology-based approach toward food production that aims to provide optimal growing conditions throughout the development of a crop located within an enclosed growing structure such as a greenhouse or building.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00003390,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,controlled environment agriculture (CEA) production,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A technology-based approach toward food production that aims to provide optimal growing conditions throughout the development of a crop located within an enclosed growing structure such as a greenhouse or building.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100224,school exposure process,,A process occuring within or in the vicinity of a school that exposes the recipient organism to a material entity.,FALSE,,,,,,,School,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100224,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,school exposure process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A process occuring within or in the vicinity of a school that exposes the recipient organism to a material entity.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100527,AMR laboratory typing platform,antimicrobial resistance laboratory typing platform|AMR_laboratory_typing_platform|AMR laboratory typing platform,An antimicrobial resistance (AMR) field which describes the brand/platform used for antibiotic susceptibility testing.,FALSE,,,,,,,PCDS:amr_laboratory_typing_platform|PCDS:*_laboratory_typing_platform,,,,,,,PCDS: Select a typing platform from the pick list provided. Use the Term Request System to request the addition of other platforms if necessary.,,,,,,,,,,,,,,PCDS: Sensitire [ARO:3004402],,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,antimicrobial resistance laboratory typing platform|AMR_laboratory_typing_platform|AMR laboratory typing platform,antimicrobial resistance laboratory typing platform slot|antimicrobial resistance laboratory typing platform field|AMR laboratory typing platform slot,,,,GENEPIO:0100527,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-12-22T00:55:53.808Z,,,,,,,,,,,,,,,,,,,AMR laboratory typing platform,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An antimicrobial resistance (AMR) field which describes the brand/platform used for antibiotic susceptibility testing.,,PCDS: The brand/platform used for antibiotic susceptibility testing,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002010,"TB lineage 3 - East-African Indian, includes CAS/Delhi",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002010,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"TB lineage 3 - East-African Indian, includes CAS/Delhi",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510039,low fat food,,"A claim that a food is low in fat, and any claim likely to have the same meaning for the consumer, may only be made where the product contains no more than 3 g of fat per 100 g for solids or 1,5 g of fat per 100 ml for liquids (1,8 g of fat per 100 ml for semi-skimmed milk). [REGULATION (EC) No 1924/2006 Corrigendum 2007-01-18].

Food having 3 grams of fat or less per amount customarily consumed (and per 50 grams of food if the amount customarily consumed is small). Meals and main dishes contain 3 grams or less fat per 100 grams of food and not more than 30% of calories from fat [US FDA].",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0039,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510039,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,low fat food,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A claim that a food is low in fat, and any claim likely to have the same meaning for the consumer, may only be made where the product contains no more than 3 g of fat per 100 g for solids or 1,5 g of fat per 100 ml for liquids (1,8 g of fat per 100 ml for semi-skimmed milk). [REGULATION (EC) No 1924/2006 Corrigendum 2007-01-18].

Food having 3 grams of fat or less per amount customarily consumed (and per 50 grams of food if the amount customarily consumed is small). Meals and main dishes contain 3 grams or less fat per 100 grams of food and not more than 30% of calories from fat [US FDA].",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002226,specimen repository/biobank service,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002226,,,,,,,,,,,,,,2019-05-03T03:24:33Z,,,,,,,,,,,,,,,,,,,specimen repository/biobank service,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_27933,beta-lactam antibiotic,,An organonitrogen heterocyclic antibiotic that contains a β-lactam ring.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:22844|CHEBI:10427,,,,,,CHEBI:27933,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,beta-lactam antibiotic,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An organonitrogen heterocyclic antibiotic that contains a β-lactam ring.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490323,acetate cellulose film,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0323,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490323,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,acetate cellulose film,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C3671,Injury,wound|trauma|Wound|Traumatic Injury|Trauma|Injury,"Damage inflicted on the body as the direct or indirect result of an external force, with or without disruption of structural continuity.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,wound|trauma|Wound|Traumatic Injury|Trauma|Injury,,,,NCIT:C3671,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Injury,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Damage inflicted on the body as the direct or indirect result of an external force, with or without disruption of structural continuity.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470120,heat treatment food preservation,,Preservation by the use of high temperature for a time sufficient to reduce or destroy undesirable microorganisms and enzyme activity. [FDA CFSAN 1995],FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470120,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,heat treatment food preservation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Preservation by the use of high temperature for a time sufficient to reduce or destroy undesirable microorganisms and enzyme activity. [FDA CFSAN 1995],,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_33859,aromatic carboxylic acid,,Any carboxylic acid in which the carboxy group is directly bonded to an aromatic ring.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:2830|CHEBI:13821|CHEBI:13817,,,,,,CHEBI:33859,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,aromatic carboxylic acid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any carboxylic acid in which the carboxy group is directly bonded to an aromatic ring.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0000479,tissue,simple tissue,"Multicellular anatomical structure that consists of many cells of one or a few types, arranged in an extracellular matrix such that their long-range organisation is at least partly a repetition of their short-range organisation.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:Tissue|ZFA:0001477|XAO:0003040|WBbt:0005729|VHOG:0001757|UMLS:C0040300|TGMA:0001844|TAO:0001477|NCIT:C12801|MESH:D014024|MA:0003002|HAO:0000043|FMA:9637|FBbt:00007003|EMAPA:35868|EHDAA2:0003043|CARO:0000043|CALOHA:TS-2090|BIRNLEX:19|BILA:0000043|AEO:0000043|AAO:0010054|AAO:0000607,,,,,,,,,,,,,,,,,,,,,,,,,tissue portion|portion of tissue,simple tissue,,,UBERON:0000479,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,tissue,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Multicellular anatomical structure that consists of many cells of one or a few types, arranged in an extracellular matrix such that their long-range organisation is at least partly a repetition of their short-range organisation.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0000476,acellular anatomical structure,,Anatomical structure that consists of cell parts and cell substances and together does not constitute a cell or a tissue.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ZFA:0000382|XAO:0003162|TGMA:0001841|TAO:0000382|HAO:0000040|FMA:63863|FBbt:00007013|EHDAA2:0003040|CARO:0000040|BILA:0000040|AEO:0000040|AAO:0010268,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0000476,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl|http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,acellular anatomical structure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Anatomical structure that consists of cell parts and cell substances and together does not constitute a cell or a tissue.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0000475,organism subdivision,anatomic region,"Anatomical structure which is a subdivision of a whole organism, consisting of components of multiple anatomical systems, largely surrounded by a contiguous region of integument.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:BodyPart|ZFA:0001308|XAO:0003013|Wikipedia:Body_part|VHOG:0001758|UMLS:C0229962|TGMA:0001840|TAO:0001308|NCIT:C32221|MIAA:0000293|MESH:D001829|MAT:0000293|MA:0002433|HAO:0000032|FMA:7153|FBbt:00007009|EMAPA:36031|EHDAA2:0003032|EFO:0000808|CARO:0000032|CALOHA:TS-2084|BIRNLEX:7|BILA:0000032|AEO:0000032|AAO:0010053,,,,,,,,,,,,,,,,,,,,,,,,,anatomic region,,,,UBERON:0000475,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,organism subdivision,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Anatomical structure which is a subdivision of a whole organism, consisting of components of multiple anatomical systems, largely surrounded by a contiguous region of integument.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0000477,anatomical cluster,,Anatomical group whose component anatomical structures lie in close proximity to each other.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0000477,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,anatomical cluster,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Anatomical group whose component anatomical structures lie in close proximity to each other.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03500017,polyethylene surface,,PE,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=N0017,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03500017,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,polyethylene surface,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PE,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_28971,ampicillin,,A penicillin in which the substituent at position 6 of the penam ring is a 2-amino-2-phenylacetamido group.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:45042|CHEBI:40648|CHEBI:2683|CHEBI:22536,,,,,,CHEBI:28971,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,ampicillin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A penicillin in which the substituent at position 6 of the penam ring is a 2-amino-2-phenylacetamido group.,,,,,,,,
http://purl.obolibrary.org/obo/OMRSE_00000086,human role within an organization,,A human social role that is created by a deontic declaration performed by an organization.,FALSE,,,,,,,human organizational role,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OMRSE:00000086,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/omrse.owl,,,,,,,,,human role within an organization,,,,,,,,,,,,,,,,,,,,,,,,,,,,Amanda Hicks,,,,A human social role that is created by a deontic declaration performed by an organization.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0001885,specimen repository organization,,An organization that provides a service to store and distribute specimens,FALSE,,,,,,,,,,,,,,,,,,,,,NIAID GSCID-BRC metadata working group,,,,,specimen repository organization,,,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0001885,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,specimen repository organization,,,,,,,Specimen Repository,,,,,,,,,,,,,,,,,,,,,"PERSON: Chris Stoeckert, Jie Zheng",,,,An organization that provides a service to store and distribute specimens,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001978,CTS strategy,,Concatenated Tag Sequencing,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI SRA: CTS,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001978,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CTS strategy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Concatenated Tag Sequencing,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001174,sample collection start date,sample_collection_date|sample collection date,A data field which describes the date on which the sample was collected.,FALSE,,,,,,,PCDS:sample_collection_date,,,,,,,PCDS: The date should be provided in ISO 8601 standard format 'YYYY-MM-DD'.,,,,,,,,,,,,,,PCDS: 2020-03-16,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,sample_collection_date|sample collection date,sample collection date slot,,,,GENEPIO:0001174,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,sample collection start date,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the date on which the sample was collected.,,PCDS: The date on which the sample was collected.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001860,1D coordinate,,This should cover all interval data,FALSE,,,,,,,,,,,,,,This should cover all interval data,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0001919|http://purl.obolibrary.org/obo/GENEPIO_0001864,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001860,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,1D coordinate,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510177,kosher milchlig claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0177,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510177,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,kosher milchlig claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0666667,nucleic acid extraction,,a material separation to recover the nucleic acid fraction of an input material,FALSE,,,,,,,,,,,,,,,,,,,,requested by Helen Parkinson for MO. Could be defined class,OBI branch derived,,,,,nucleic acid extraction,,Phenol / chlorophorm extraction disolvation of protein content folllowed by ethanol precipitation of the nucleic acid fraction over night in the fridge followed by centrifugation to obtain a nucleic acid pellet.,,,http://purl.obolibrary.org/obo/IAO_0000125,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0666667,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,nucleic acid extraction,,,,,,,,,,,,,,,,,,,,,,,,,,,,PlanAndPlannedProcess Branch,,,,a material separation to recover the nucleic acid fraction of an input material,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038698,posterior superior pancreaticoduodenal lymph node,posterosuperior pancreaticoduodenal lymph node|no. 13a pancreaticoduodenal lymph node|jPS no. 13a node|jPS 13a node,Superior pancreaticoduodenal lymph node located on the posterior aspect of superior portion of head of pancreas.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:277310,,,,,,,,,,,,,,,,,,,,,,,,,posterosuperior pancreaticoduodenal lymph node|no. 13a pancreaticoduodenal lymph node|jPS no. 13a node|jPS 13a node,,,,UBERON:0038698,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,posterior superior pancreaticoduodenal lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Superior pancreaticoduodenal lymph node located on the posterior aspect of superior portion of head of pancreas.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038691,common hepatic lymph node,,Hepatic lymph node located along the common hepatic artery.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:277259,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0038691,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,common hepatic lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Hepatic lymph node located along the common hepatic artery.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038695,proximal superior pancreatic lymph node,proximal superior pancreaticosplenic lymph node|no. 11p superior pancreatic lymph node|jPS no. 11p node|jPS 11p node,Superior pancreatic lymph node located along the proximal segment of splenic artery.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:277295,,,,,,,,,,,,,,,,,,,,,,,,,proximal superior pancreaticosplenic lymph node|no. 11p superior pancreatic lymph node|jPS no. 11p node|jPS 11p node,,,,UBERON:0038695,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,proximal superior pancreatic lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Superior pancreatic lymph node located along the proximal segment of splenic artery.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038699,anterior inferior pancreaticoduodenal lymph node,no. 17b pancreaticoduodenal lymph node|jPS no. 17b node|jPS 17b node|anteroinferior pancreaticoduodenal lymph node,Inferior pancreaticoduodenal lymph node located on the anterior aspect of inferior region of head of pancreas.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:277315,,,,,,,,,,,,,,,,,,,,,,,,,no. 17b pancreaticoduodenal lymph node|jPS no. 17b node|jPS 17b node|anteroinferior pancreaticoduodenal lymph node,,,,UBERON:0038699,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,anterior inferior pancreaticoduodenal lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Inferior pancreaticoduodenal lymph node located on the anterior aspect of inferior region of head of pancreas.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038697,anterior superior pancreaticoduodenal lymph node,no. 17a pancreaticoduodenal lymph node|jPS no. 17a node|jPS 17a node|anterosuperior pancreaticoduodenal lymph node,Superior pancreaticoduodenal lymph node located on the anterior anterior of superior region of head of pancreas.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:277305,,,,,,,,,,,,,,,,,,,,,,,,,no. 17a pancreaticoduodenal lymph node|jPS no. 17a node|jPS 17a node|anterosuperior pancreaticoduodenal lymph node,,,,UBERON:0038697,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,anterior superior pancreaticoduodenal lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Superior pancreaticoduodenal lymph node located on the anterior anterior of superior region of head of pancreas.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038696,distal superior pancreatic lymph node,no. 11d superior pancreatic lymph node|jPS no. 11d node|jPS 11d node|distal superior pancreaticosplenic lymph node,Superior pancreatic lymph node located along the distal segment of splenic artery.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:277298,,,,,,,,,,,,,,,,,,,,,,,,,no. 11d superior pancreatic lymph node|jPS no. 11d node|jPS 11d node|distal superior pancreaticosplenic lymph node,,,,UBERON:0038696,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,distal superior pancreatic lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Superior pancreatic lymph node located along the distal segment of splenic artery.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038694,hepatoportal lymph node,portal lymph node,Hepatic lymph node located along the portal vein.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:277271,,,,,,,,,,,,,,,,,,,,,,,,portal lymph node,portahepatic lymph node|porta hepatis lymph node|periportal lymph node|no. 12p hepatic lymph node|jPS No. 12p node|jPS 12p node,,,,UBERON:0038694,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,hepatoportal lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Hepatic lymph node located along the portal vein.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00004537,bison primal cut,,A cut of meat that is initially separated from the carcass of a bison during butchering.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00004537,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,bison primal cut,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A cut of meat that is initially separated from the carcass of a bison during butchering.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002007,draft tuberculosis - case model,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002007,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,draft tuberculosis - case model,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001565,contig N50 length QC threshold,,The contig N50 length QC threshold is a minimum length threshold that a contig N50 length datum should be above for good QC.  A lower length is indicative of assembly problems (insufficient read depth) or a mismatched reference genome.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001565,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,,,,,,,contig N50 length QC threshold,,,,,Assembly QC,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,The contig N50 length QC threshold is a minimum length threshold that a contig N50 length datum should be above for good QC.  A lower length is indicative of assembly problems (insufficient read depth) or a mismatched reference genome.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001069,rural backpacking activity,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001069,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,rural backpacking activity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510112,no sulfite added claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0112,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510112,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,no sulfite added claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UO_0010030,gallon,gal,"An imperial volume unit which is equivalent to 4,546.09 millilitres, or 8 pints.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,gal,,,,UO:0010030,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,gallon,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An imperial volume unit which is equivalent to 4,546.09 millilitres, or 8 pints.",,,,,,,,
http://purl.obolibrary.org/obo/OMIT_0008006,Hydrolases,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OMIT:0008006,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/omit.owl,,,,,,,,,Hydrolases,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_9940,Ovis aries,,,FALSE,,,,,,,wild sheep|sheep|lambs|domestic sheep,,,,,,,,,,,,,,,,,,,Ovis aries,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:9940,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Ovis aries,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002054,obsolete: Trek,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002054,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: Trek,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ARO_3004409,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000166,beef tri-tip steak (raw),,A raw beef tri-tip steak.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000166,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef tri-tip steak (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef tri-tip steak.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_3139,bleomycin A2,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:653800|CHEBI:41102|CHEBI:357107|CHEBI:165316,,,,,,CHEBI:3139,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,bleomycin A2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00005376,beef bolar blade,,A beef sub-primal cut taken from the shoulder blade section of the chuck primal.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00005376,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef bolar blade,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A beef sub-primal cut taken from the shoulder blade section of the chuck primal.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001732,obsolete: environmental (swab or sampling),,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,"""environment (swab or sampling)"" is a specific response for NCBI BioSample that could be mapped or unified with ""environment sample"" used elsewhere in GenEpiO",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001732,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: environmental (swab or sampling),,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,http://purl.obolibrary.org/obo/GENEPIO_0001246,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001688,test specification,,A lab test specification indicates the inputs and outputs (results / conclusions) of a test.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001688,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,test specification,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A lab test specification indicates the inputs and outputs (results / conclusions) of a test.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001999,draft tuberculosis - dataset features and provenance,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001999,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,draft tuberculosis - dataset features and provenance,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GSSO_002294,gender variance,gender variance among youth|http://purl.oboInOwllibrary.org/oboInOwl/GSSO_000128,"Gender variance, or, sometimes, gender nonconformity, is behavior or gender expression exhibited by an individual that does not match cultural/social masculine and feminine gender norms and/or expectations.",FALSE,,,,,,,,,,,,,,"""Gender non-conforming"" and ""gender diverse"" are often preferred to ""gender variant"" because ""gender variant"" (and, by extension, ""gender variance"") implies a standard normative for gender (i.e. a way gender is ""supposed to be""). However, many resources emply the term as a helpful ""catch-all"" for various transgender and cultural gender roles and identities.",,,,,,,,,,,,,,,,,,https://www.wikidata.org/wiki/Q4135211|https://en.wikipedia.org/wiki/Gender_variance,,,,,,,,,,,,,,,,,,,,,,,,,,gender variance among youth|http://purl.oboInOwllibrary.org/oboInOwl/GSSO_000128,,,GSSO:002294,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gsso.owl,,,,,,,,,kønsvarians|gender variance,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Gender variance, or, sometimes, gender nonconformity, is behavior or gender expression exhibited by an individual that does not match cultural/social masculine and feminine gender norms and/or expectations.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100129,Illumina NextSeq 2000,,A DNA sequencer which is manufactured by the Illumina corporation using sequence-by-synthesis chemistry that fits on a benchtop and has an output capacity of 30-360 Gb.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100129,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,Illumina NextSeq 2000,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A DNA sequencer which is manufactured by the Illumina corporation using sequence-by-synthesis chemistry that fits on a benchtop and has an output capacity of 30-360 Gb.,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000071,Dinka,,A Nilotic Eastern population with a population size of 5 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000071,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Dinka,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Nilotic Eastern population with a population size of 5 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000075,Sebei,,A Kalenjin population with a population size of 0.3 million,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000075,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Sebei,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Kalenjin population with a population size of 0.3 million,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000074,Bambara,,A Mande Western population with a population size of 14 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000074,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Bambara,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Mande Western population with a population size of 14 millions,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0010039,food storage organ,,An organ of the digestive tract that is capable of retaining and storing food.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,TGMA:0001041|TADS:0000172|BSA:0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0010039,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,food storage organ,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An organ of the digestive tract that is capable of retaining and storing food.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_23132,chlorobenzenes,,Any organochlorine compound containing a benzene ring which is substituted by one or more chlorines.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:23132,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,chlorobenzenes,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any organochlorine compound containing a benzene ring which is substituted by one or more chlorines.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_33670,heteromonocyclic compound,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:33670,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,heteromonocyclic compound,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_5614,eye disease,,An eye and adnexa disease that is located_in the eye.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:5614,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,eye disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An eye and adnexa disease that is located_in the eye.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001522,data enumeration,,"A data item that is a set of entities, referenced by mention, that don't necessarily have something in common.",FALSE,,,,,,,,,,,,,,"While ""enumeration"" is a ""data item"" not everything referenced within an enumeration qualifies as a ""data item"". Not to be confused with ""data set"" which describes ""data item""s of the same type that have something in common.",,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001522,,,,,,,,,,,,,,2022-01-31T03:45:04Z,,,,,,,,,,,,,,,,,,,data enumeration,,,,,,,,,,,,,,,,,,,,,,,,,,,,0000-0002-9578-0788|0000-0002-8844-9165,,,,"A data item that is a set of entities, referenced by mention, that don't necessarily have something in common.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490405,polyethylene - regenerated cellulose container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0405,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490405,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,polyethylene - regenerated cellulose container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001660,neuter,,An animal that has had a substantial part of its reproductive organs removed surgically.,FALSE,,,,,,,,,,,,,,Not a PATO phenotypic sex catigorical value.,,,,,,,,,,,,,,,,,,NCBI BioSample: neuter,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001660,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,neuter,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,An animal that has had a substantial part of its reproductive organs removed surgically.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02021803,"animal fillet (skinless, raw)",,A raw skinless animal fillet,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02021803,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"animal fillet (skinless, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw skinless animal fillet,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C89333,Term Infant,Term Neonate|Term Infant|Full Term Neonate|Full Term Infant,"An age group comprised of infants greater than or equal to 37 weeks, 0 days and less than or equal to 41 weeks, 6 days gestational age.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Term Neonate|Term Infant|Full Term Neonate|Full Term Infant,,,,NCIT:C89333,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Term Infant,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An age group comprised of infants greater than or equal to 37 weeks, 0 days and less than or equal to 41 weeks, 6 days gestational age.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001820,NIFSTD,,"The NIFSTD ontology of the Neuroscience Information Framework is composed of a collection of OWL modules with separate modules covering major domains of neuroscience: anatomy, cell, subcellular, molecule, organism, function and dysfunction.",FALSE,,,,,,,,,,,,,,,,,,,,,https://wiki.nci.nih.gov/display/VKC/NIFSTD+Ontology,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001820,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NIFSTD,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"The NIFSTD ontology of the Neuroscience Information Framework is composed of a collection of OWL modules with separate modules covering major domains of neuroscience: anatomy, cell, subcellular, molecule, organism, function and dysfunction.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00001143,fungus food product,,A food product consisting of an edible fungi or mushroom or yeast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00001143,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,fungus food product,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A food product consisting of an edible fungi or mushroom or yeast.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_46848,N-arylpiperazine,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:46848,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,N-arylpiperazine,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/MP_0005384,cellular phenotype,cell phenotype,the observable morphological and physiological characteristics of the basic structural and functional unit of all mammalian organisms that are manifested through development and lifespan,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,cell phenotype,,,,MP:0005384,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mp.owl,,,,,,,,,cellular phenotype,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,the observable morphological and physiological characteristics of the basic structural and functional unit of all mammalian organisms that are manifested through development and lifespan,,,,,,,,
http://purl.obolibrary.org/obo/MP_0005388,respiratory system phenotype,,the observable morphological and physiological characteristics of the mammalian system responsible for the exchange of oxygen and carbon dioxide with the environment that are manifested through development and lifespan,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MP:0005388,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mp.owl,,,,,,,,,respiratory system phenotype,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,the observable morphological and physiological characteristics of the mammalian system responsible for the exchange of oxygen and carbon dioxide with the environment that are manifested through development and lifespan,,,,,,,,
http://purl.obolibrary.org/obo/MP_0005387,immune system phenotype,,"the observable morphological and physiological characteristics of the mammalian system that protects the body from foreign substances, cells, and tissues by producing the immune response and that includes especially the thymus, spleen, lymphoid tissue, lymphocytes including the B cells and T cells, and antibodies that are manifested through development and lifespan",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MP:0005387,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mp.owl,,,,,,,,,immune system phenotype,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"the observable morphological and physiological characteristics of the mammalian system that protects the body from foreign substances, cells, and tissues by producing the immune response and that includes especially the thymus, spleen, lymphoid tissue, lymphocytes including the B cells and T cells, and antibodies that are manifested through development and lifespan",,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000228,Manjak,,A Western African population with a population size of 0.285 million,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000228,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Manjak,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Western African population with a population size of 0.285 million,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000220,Sahrawi,,A Berber Northern population with a population size of 0.57 million,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000220,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Sahrawi,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Berber Northern population with a population size of 0.57 million,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000224,Jarawa,,A Bantu Western population with a population size of 0.250 million,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000224,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Jarawa,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Bantu Western population with a population size of 0.250 million,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000229,Balanta,,A Western African population with a population size of 0.324 million,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000229,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Balanta,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Western African population with a population size of 0.324 million,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000225,Hadza,,A Eastern African population with a population size of 1300 persons,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000225,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Hadza,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Eastern African population with a population size of 1300 persons,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000227,Serer,,A Western African population with a population size of 1.9 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000227,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Serer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Western African population with a population size of 1.9 millions,,,,,,,,
http://purl.obolibrary.org/obo/HP_0000421,Epistaxis,Nosebleed|Nose bleeding|Nose bleed|Nasal hemorrhage|Nasal haemorrhage|Frequent nosebleeds|Bloody nose,"Epistaxis, or nosebleed, refers to a hemorrhage localized in the nose.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0014591|SNOMEDCT_US:249366005|SNOMEDCT_US:12441001|NCIT:C26766|ICD9:784.7|ICD10:R04.0|EFO:0003895|COHD:318556,,,,,,,,,,,,,,,,,,,,,,,,,Nosebleed|Nose bleeding|Nose bleed|Nasal hemorrhage|Nasal haemorrhage|Frequent nosebleeds|Bloody nose,,,,HP:0000421,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Epistaxis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Epistaxis, or nosebleed, refers to a hemorrhage localized in the nose.",,,,,,,,
http://purl.obolibrary.org/obo/UO_0000001,length unit,,A unit which is a standard measure of the distance between two points.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:0000001,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,length unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A unit which is a standard measure of the distance between two points.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000005,temperature unit,temperature derived unit,A unit which is a standard measure of the average kinetic energy of the particles in a sample of matter.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,temperature derived unit,,,,UO:0000005,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,temperature unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A unit which is a standard measure of the average kinetic energy of the particles in a sample of matter.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000003,time unit,time derived unit,A unit which is a standard measure of the dimension in which events occur in sequence.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,time derived unit,,,,UO:0000003,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,time unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A unit which is a standard measure of the dimension in which events occur in sequence.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000000,unit,,A unit of measurement is a standardized quantity of a physical quality.,FALSE,,,,,,,,,,,,,,"Damion Dooley's note: Need to build this out further with reference to http://unitsofmeasure.org/trac and other unit ontologies: 
  
[1]    R. Hodgson and P. J. Keller, ""QUDT-quantities, units, dimensions and data types in OWL and XML."" Online (September 2011) http://www. qudt.org
[2]    M. van Assem, H. Rijgersberg, and J. Top, ""Ontology of units of measure and related concepts."" Semantic Web 4, no. 1 (2013): 3-13.
[3]    G. V. Gkoutos, P. N. Schofield, and R. Hoehndorf, ""The Units Ontology: a tool for integrating units of measurement in science."" Database2012 (2012): bas033.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:0000000,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A unit of measurement is a standardized quantity of a physical quality.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000006,substance unit,,A unit which is a standardised quantity of an element or compound with uniform composition.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:0000006,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,substance unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A unit which is a standardised quantity of an element or compound with uniform composition.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000008,meter,metre|m,A length unit which is equal to the length of the path traveled by light in vacuum during a time interval of 1/299 792 458 of a second.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,metre|m,,,,UO:0000008,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,meter,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A length unit which is equal to the length of the path traveled by light in vacuum during a time interval of 1/299 792 458 of a second.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C79916,investigative subject,,"An entity, either biologic or otherwise, of interest in an investigation. [def-source: NCI]",FALSE,,,,,,,,,,,,,,,,,,,,,NCIT Thesaurus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCIT:C79916,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,investigative subject,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"An entity, either biologic or otherwise, of interest in an investigation. [def-source: NCI]",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102205,most probable number per milliliter,,A unit of microbial density that describes the most probable number of microbes within one milliliter of material.,FALSE,,,,,,,MPN/mL,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102205,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2026-04-13T19:52:38.515Z,,,,,,,,,,,,,,,,,,,most probable number per milliliter,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A unit of microbial density that describes the most probable number of microbes within one milliliter of material.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000229,beef small end rib roast,,A rib roast that includes ribs 9 or 10 through 12 and is next to the loin.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000229,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef small end rib roast,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A rib roast that includes ribs 9 or 10 through 12 and is next to the loin.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0025270,Abnormal esophagus physiology,Functional abnormality of the oesophagus|Functional abnormality of the esophagus|Abnormality of oesophagus physiology|Abnormality of esophagus physiology,Any physiological abnormality of the esophagus.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Functional abnormality of the oesophagus|Functional abnormality of the esophagus|Abnormality of oesophagus physiology|Abnormality of esophagus physiology,,,,HP:0025270,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal esophagus physiology,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any physiological abnormality of the esophagus.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_18165,isopenicillin N,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:6036|CHEBI:43447|CHEBI:14472,,,,,,CHEBI:18165,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,isopenicillin N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ARO_3004432,wild-type,,"A microbe whose susceptibility to antibiotics is comparable to that of a reference susceptible microbe, meaning that the microbe is sensitive to the particular antibiotic.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ARO:3004432,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/aro.owl,,,,,,,,,wild-type,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A microbe whose susceptibility to antibiotics is comparable to that of a reference susceptible microbe, meaning that the microbe is sensitive to the particular antibiotic.",,,,,,,,
http://purl.bioontology.org/ontology/MESH/D001482,base composition,"base composition
base compositions
base ratio
base ratios
gc composition
gc compositions
gc content
gc contents
gc
g+c composition
g+c compositions
g+c content
g+c contents
guanine + cytosine composition
guanine + cytosine content",the relative amounts of the purines and pyrimidines in a nucleic acid.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,"base composition
base compositions
base ratio
base ratios
gc composition
gc compositions
gc content
gc contents
gc
g+c composition
g+c compositions
g+c content
g+c contents
guanine + cytosine composition
guanine + cytosine content",,,,D001482,,,,,,,,,,,,,,,,,,,,,,,,http://purl.bioontology.org/ontology/MESH,,,,,,,,,base composition,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,the relative amounts of the purines and pyrimidines in a nucleic acid.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C100811,Pregnancy Partner,Pregnancy Partner|PREGNANCY PARTNER,An individual who provides support to a pregnant individual.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Pregnancy Partner|PREGNANCY PARTNER,,,,NCIT:C100811,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Pregnancy Partner,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An individual who provides support to a pregnant individual.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C100812,Sexual Partner,Sexual Partner|SEXUAL PARTNER,A person with whom one has had sexual relations.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Sexual Partner|SEXUAL PARTNER,,,,NCIT:C100812,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Sexual Partner,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A person with whom one has had sexual relations.,,,,,,,,
http://purl.obolibrary.org/obo/ARO_3004368,European Committee on Antimicrobial Susceptibility Testing (EUCAST),,"EUCAST is a standing committee jointly organized by ESCMID, ECDC and European national breakpoint committees; it deals with breakpoints and technical aspects of phenotypic in-vitro antimicrobial susceptibility testing.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,EUCAST,,,,,,ARO:3004368,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/aro.owl,,,,,,,,,European Committee on Antimicrobial Susceptibility Testing (EUCAST),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"EUCAST is a standing committee jointly organized by ESCMID, ECDC and European national breakpoint committees; it deals with breakpoints and technical aspects of phenotypic in-vitro antimicrobial susceptibility testing.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001012,MIRU24 - Canadian standard,,The MIRU24 - Canadian standard is a Mycobacterium tuberculosis typing method exactly like MIRU24 - international standard except that the report of the ordering of the matching loci is different.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001012,,,,"The ordering of loci is as follows: MIRU 02, MIRU 04, MIRU 10, MIRU 16, MIRU 20, MIRU 23, MIRU 24, MIRU 26, MIRU 27, MIRU 31, MIRU 39, MIRU 40, 424, 577, 1955, 2163, 2165, 2347, 2401, 2461, 3171, 3690, 4052, 4156",,,,,,,,,,,,,,,,,,,,,,,,,,,,,MIRU24 - Canadian standard,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,The MIRU24 - Canadian standard is a Mycobacterium tuberculosis typing method exactly like MIRU24 - international standard except that the report of the ordering of the matching loci is different.,,,,,,,,
http://purl.obolibrary.org/obo/IDO_0000451,invasive disposition,,A disposition borne by an infectious agent that is the disposition to penetrate the epithelial barriers of an organism of another Species.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,IDO:0000451,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ido.owl,,,,,,,,,invasive disposition,,,,,,,,,,,,,,,,,,,,,,,,,,,,Lindsay Cowell|Alexander Diehl|Albert Goldfain,,,,A disposition borne by an infectious agent that is the disposition to penetrate the epithelial barriers of an organism of another Species.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100854,artic-v5.2.0_1200 strategy,,An amplicon strategy which was developed by the ARTIC consortium for SARS-CoV-2 with the attributes of version 5.2.0 which produces amplicons approximately 1200bp in length.,FALSE,,,,,,,artic-v5.2.0_1200|artic v5.2.0_1200,,,,,,,,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100854,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2026-04-13T19:52:38.515Z,,,,,,,,,,,,,,,,,,,artic-v5.2.0_1200 strategy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An amplicon strategy which was developed by the ARTIC consortium for SARS-CoV-2 with the attributes of version 5.2.0 which produces amplicons approximately 1200bp in length.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102289,Ultima sequencing instrument model,,"A DNA sequencer manufactured by Ultima Genomics which utilises a traditional flow cell with a massive, open-to-the-elements, flat circular silicon wafer.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102289,,,,,,,,,,,,,https://orcid.org/0000-0002-7654-6902|https://orcid.org/0000-0001-8008-8249,2026-03-30T14:26:04.627Z,,,,,,,,,,,,,,,,,,,Ultima sequencing instrument model,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A DNA sequencer manufactured by Ultima Genomics which utilises a traditional flow cell with a massive, open-to-the-elements, flat circular silicon wafer.",,,,,,,,
http://purl.obolibrary.org/obo/OMRSE_00002072,role in human social processes,,A role that inheres in some entity that is realized in a social act.,FALSE,,,,,,,,,,,,,,Previous definition: A role played by an entity in human social processes.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OMRSE:00002072,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/omrse.owl,,,,,,,,,role in human social processes,,,,,,,,,,,,,,,,,,,,,,,,,,,,Matthew Diller,,,,A role that inheres in some entity that is realized in a social act.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03307374,herring fillet in tomato sauce,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://bioregistry.io/reference/siren:F7374,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03307374,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,herring fillet in tomato sauce,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03450015,boiling and then draining,,Cooked in boiling water at 212 degrees F.; water that is not absorbed into the food product is discarded after cooking.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=G0015,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03450015,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,boiling and then draining,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Cooked in boiling water at 212 degrees F.; water that is not absorbed into the food product is discarded after cooking.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000289,pork loin (raw),,A raw pork loin cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000289,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pork loin (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw pork loin cut.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100831,deduplication method,deduplication method,A data field which describes the method used to remove duplicated reads in a sequence read dataset.,FALSE,,,,,,,PCDS:deduplication_method,,,,,,,"PCDS: Provide the deduplication software name followed by the version, or a link to a tool or method.",,,,,,,,,,,,,,PCDS: DeDup 0.12.8,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,deduplication method,deduplication method slot,,,,GENEPIO:0100831,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,deduplication method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the method used to remove duplicated reads in a sequence read dataset.,,PCDS: The method used to remove duplicated reads in a sequence read dataset.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100727,microbiological quantification data tag,microbiological quantification data type|microbiological quantification attribute bundle,A dataset attribute bundle which indicates the presence of microbiological quantification data.,FALSE,,,,,,,microbiological quantification,,,,,,,Example Guidance: Use this tag to indicate additional data is available that provides quantification information from microbiological properties.,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,microbiological quantification data type|microbiological quantification attribute bundle,,,,GENEPIO:0100727,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-05-18T19:08:34.869Z,,,,,,,,,,,,,,,,,,,microbiological quantification data tag,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A dataset attribute bundle which indicates the presence of microbiological quantification data.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0600005,collecting specimen from organism,,a process with the objective to obtain a material entity that was part of an organism for potential future use in an investigation,FALSE,,,,,,,,,,,,,,,,,,,,,IEDB,,,,,collecting specimen from organism,,"taking a sputum sample from a cancer patient, taking the spleen from a killed mouse, collecting a urine sample from a patient",,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/COB_0000022,,,,,,,,,,,OBI:0600005,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,collecting specimen from organism,,,,,,,,,,,,,,,,,,,,,,,,,,,,PERSON:Bjoern Peters,,,,a process with the objective to obtain a material entity that was part of an organism for potential future use in an investigation,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00004699,Metropolitan City (Republic of Korea),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00004699,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Metropolitan City (Republic of Korea),http://purl.obolibrary.org/obo/GAZ_00002802,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490334,"paper container, untreated",,A paper container that has not been treated with any agents.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0334,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490334,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"paper container, untreated",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A paper container that has not been treated with any agents.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_22928,bromine molecular entity,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:22928,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,bromine molecular entity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02021247,"lamb roast (boneless, raw)",,A raw and boneless lamb roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02021247,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"lamb roast (boneless, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw and boneless lamb roast.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0000490,unilaminar epithelium,simple epithelium,"Epithelium which consists of a single layer of epithelial cells. Examples: endothelium, mesothelium, glandular squamous epithelium.[FMA].",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ZFA:0001495|XAO:0004007|UMLS:C0682574|TAO:0001495|SCTID:309043004|NCIT:C33554|HAO:0000073|FMA:45561|EHDAA2:0003073|CARO:0000073|BTO:0002073|BILA:0000073|AEO:0000073|AAO:0010062,,,,,,,,,,,,,,,,,,,,,,,,,simple epithelium,,,,UBERON:0000490,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,unilaminar epithelium,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Epithelium which consists of a single layer of epithelial cells. Examples: endothelium, mesothelium, glandular squamous epithelium.[FMA].",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_50893,azaarene,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:50893,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,azaarene,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_1365258,Escherichia coli 151_06,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,Escherichia coli 151_06,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:1365258,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Escherichia coli 151_06,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001844,origin,,A point in zero-dimensional (0D) space in which the origin is a fixed point of reference for the geometry of the surrounding space.,FALSE,,,,,,,,,,,,,,"""In mathematics, the origin of a Euclidean space is a special point, usually denoted by the letter O, used as a fixed point of reference for the geometry of the surrounding space.

In physical problems, the choice of origin is often arbitrary, meaning any choice of origin will ultimately give the same answer. This allows one to pick an origin point that makes the mathematics as simple as possible, often by taking advantage of some kind of geometric symmetry.""",,,,,,,https://en.wikipedia.org/wiki/Origin_(mathematics),,,,,,,"(0,0) is the origin of the cartesian coordinate system.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001844,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,origin,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A point in zero-dimensional (0D) space in which the origin is a fixed point of reference for the geometry of the surrounding space.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_7731,ofloxacin,,"A racemate comprising equimolar amounts of levofloxacin and dextrofloxacin. It is a synthetic fluoroquinolone antibacterial agent which inhibits the supercoiling activity of bacterial DNA gyrase, halting DNA replication.",FALSE,,,,,,,Ofx,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:100146,,,,,,CHEBI:7731,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,ofloxacin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A racemate comprising equimolar amounts of levofloxacin and dextrofloxacin. It is a synthetic fluoroquinolone antibacterial agent which inhibits the supercoiling activity of bacterial DNA gyrase, halting DNA replication.",,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000015,cylindrical coordinate system,,"A cylindrical coordinate system is a three-dimensional coordinate system that specifies point positions by the distance from a chosen reference axis, the direction from the axis relative to a chosen reference direction, and the distance from a chosen reference plane perpendicular to the axis. The latter distance is given as a positive or negative number depending on which side of the reference plane faces the point.",FALSE,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Cylindrical_coordinate_system,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000015,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,cylindrical coordinate system,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra|Orlaith Burke|Alejandra Gonzalez-Beltran,,,,"A cylindrical coordinate system is a three-dimensional coordinate system that specifies point positions by the distance from a chosen reference axis, the direction from the axis relative to a chosen reference direction, and the distance from a chosen reference plane perpendicular to the axis. The latter distance is given as a positive or negative number depending on which side of the reference plane faces the point.",,,,,,,,
http://purl.obolibrary.org/obo/OBI_0000973,sequence data,,A measurement datum that representing the primary structure of a macromolecule(it's sequence) sometimes associated with an indicator of confidence of that measurement.|A data item that representing the primary structure of a macromolecule(it's sequence) sometimes associated with an indicator of confidence of that measurement.,FALSE,,,,,,,,,,,,,,,,,,,,,GROUP: OBI,,,,,sequence data,,example of usage: the representation of a nucleotide sequence in FASTA format used for a sequence similarity search.,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0000973,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,sequence data,,,,,,,,,,,,,,,,,,,,,,,,,,,,Person:Chris Stoeckert,,,,A measurement datum that representing the primary structure of a macromolecule(it's sequence) sometimes associated with an indicator of confidence of that measurement.|A data item that representing the primary structure of a macromolecule(it's sequence) sometimes associated with an indicator of confidence of that measurement.,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0015925,interstitial lung disease,interstitial lung disease|ILD,"A diverse group of lung diseases that affect the lung parenchyma. They are characterized by an initial inflammation of pulmonary alveoli that extends to the interstitium and beyond leading to diffuse pulmonary fibrosis. Interstitial lung diseases are classified by their etiology (known or unknown causes), and radiological-pathological features.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C5441745|SCTID:233703007|Orphanet:182095|NCIT:C164315|MedDRA:10022611|MESH:D017563|MEDGEN:1788738|ICD10CM:J80-J84|EFO:0004244|DOID:3082,,,,,,,,,,,,,,,,,,,,,,,,,interstitial lung disease|ILD,,,,MONDO:0015925,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar|http://purl.oboInOwllibrary.org/oboInOwl/mondo#ordo_group_of_disorders|http://purl.oboInOwllibrary.org/oboInOwl/mondo#doid_rare|http://purl.oboInOwllibrary.org/oboInOwl/mondo#disease_grouping,,,,,,,,interstitial lung disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A diverse group of lung diseases that affect the lung parenchyma. They are characterized by an initial inflammation of pulmonary alveoli that extends to the interstitium and beyond leading to diffuse pulmonary fibrosis. Interstitial lung diseases are classified by their etiology (known or unknown causes), and radiological-pathological features.",,,,,,,,
http://purl.obolibrary.org/obo/OMRSE_00000300,institutional health care provider role,institutional healthcare provider role,A human role within an organization that itself bears a healthcare provider organization role.,FALSE,,,,,,,human role within a healthcare organization|human role within a health care organization,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,institutional healthcare provider role,,,,OMRSE:00000300,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/omrse.owl,,,,,,,,,institutional health care provider role,,,,,,,,,,,,,,,,,,,,,,,,,,,,Matthew Diller,,,,A human role within an organization that itself bears a healthcare provider organization role.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_03501213,light switch,"switch, dimmer switch",A switch which turns a light on or off.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"switch, dimmer switch",lightswitch,,,,ENVO:03501213,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,light switch,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A switch which turns a light on or off.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510012,pet fish as consumer,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0012,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510012,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pet fish as consumer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_10690,mastitis,,A breast disease characterized by painful infection of the breast tissue.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:10690,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,mastitis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A breast disease characterized by painful infection of the breast tissue.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0419,Paraguayan,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0419,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Paraguayan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0412,Guyanese,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0412,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Guyanese,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0411,Guatemalan,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0411,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Guatemalan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0410,Grenadian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0410,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Grenadian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0417,Nicaraguan,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0417,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Nicaraguan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0415,Mexican,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0415,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Mexican,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0418,Panamanian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0418,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Panamanian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0413,Honduran,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0413,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Honduran,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0416,Montserratian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0416,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Montserratian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0414,Martinican,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0414,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Martinican,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://www.ebi.ac.uk/efo/EFO_0004425,initial time point,initial timepoint,The first time point measured at the start of some process.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,initial timepoint,,,,efo:EFO_0004425,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,initial time point,,,,,,,,,,,,,,,,,,,,,,,,,,,,James Malone,,,,The first time point measured at the start of some process.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00009905,"populated place, Somalia",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00009905,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Somalia",http://purl.obolibrary.org/obo/GAZ_00001104,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0004992,cancer,"neoplasm, malignant|neoplasm (disease), malignant|malignant tumour|malignant tumor|malignant neoplastic disease|malignant neoplasm (disease)|malignant neoplasm|malignant growth|malignancy|cell type cancer|cancer|CA","A tumor composed of atypical neoplastic, often pleomorphic cells that invade other tissues. Malignant neoplasms often metastasize to distant anatomic sites and may recur after excision. The most common malignant neoplasms are carcinomas (adenocarcinomas or squamous cell carcinomas), Hodgkin and non-Hodgkin lymphomas, leukemias, melanomas, and sarcomas.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,birnlex:406|UMLS:C0006826|SCTID:363346000|ONCOTREE:MT|NCIT:C9305|MEDGEN:14297|ICDO:8000/3|ICD9:199.1|ICD9:199|ICD9:195.8|DOID:162|DOID:0050687|DOID:0050686,,,,,,,,,,,,,,,,,,,,,,,,,"neoplasm, malignant|neoplasm (disease), malignant|malignant tumour|malignant tumor|malignant neoplastic disease|malignant neoplasm (disease)|malignant neoplasm|malignant growth|malignancy|cell type cancer|cancer|CA",,,,MONDO:0004992,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,cancer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A tumor composed of atypical neoplastic, often pleomorphic cells that invade other tissues. Malignant neoplasms often metastasize to distant anatomic sites and may recur after excision. The most common malignant neoplasms are carcinomas (adenocarcinomas or squamous cell carcinomas), Hodgkin and non-Hodgkin lymphomas, leukemias, melanomas, and sarcomas.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C85405,School Age Child,School Age Child,An age group comprised of individuals between 5 and 12 years of age.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,School Age Child,,,,NCIT:C85405,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,School Age Child,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An age group comprised of individuals between 5 and 12 years of age.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0000622,Blurred vision,Blurred vision,Lack of sharpness of vision resulting in the inability to see fine detail.,FALSE,,,,,,,,,,,,,,This is a very nonspecific term and it is preferable to describe the correlates of blurred vision with the corresponding terms if possible.,,,,,,,,,,,,,,,,,,UMLS:C0344232|SNOMEDCT_US:246636008|SNOMEDCT_US:111516008,,,,,,,,,,,,,,,,,,,,,,,HP:0007723,,Blurred vision,,,,HP:0000622,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,http://purl.oboInOwllibrary.org/oboInOwl/hp#hposlim_core,,,,,,,,Blurred vision,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Lack of sharpness of vision resulting in the inability to see fine detail.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020206,piece of chicken meat (raw),,A raw piece of chicken meat.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020206,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of chicken meat (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw piece of chicken meat.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0000234,Abnormality of the head,Head abnormality|Abnormality of the head|Abnormal head,An abnormality of the head.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4021812,,,,,,,,,,,,,,,,,,,,,,,,,Head abnormality|Abnormality of the head|Abnormal head,,,,HP:0000234,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormality of the head,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An abnormality of the head.,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_192953,Salmonella enterica subsp. enterica serovar Stanley,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,Salmonella enterica subsp. enterica serovar Stanley,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:192953,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Salmonella enterica subsp. enterica serovar Stanley,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100233,no prior antiviral treatment,,An absence of antiviral treatment administered prior to the current regimen or test.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100233,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,no prior antiviral treatment,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An absence of antiviral treatment administered prior to the current regimen or test.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001942,CAGE method,,Cap-analysis gene expression.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI SRA: CAGE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001942,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CAGE method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Cap-analysis gene expression.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C165792,Foster Father,Foster Father,A male foster parent.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Foster Father,,,,NCIT:C165792,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Foster Father,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A male foster parent.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C165793,Foster Mother,Foster Mother,A female foster parent.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Foster Mother,,,,NCIT:C165793,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Foster Mother,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A female foster parent.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_33262,elemental oxygen,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:33262,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,elemental oxygen,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/OAE_0002678,OAE_0002678,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OAE:0002678,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,fetal death (miscarriage/still birth),,,,
http://purl.obolibrary.org/obo/CHEBI_38099,thiadiazoles,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:38099,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,thiadiazoles,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00003042,piggery,,An animal house which is used to house pigs.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Piggery,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00003042,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,piggery,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An animal house which is used to house pigs.,,,,,,,,
http://purl.obolibrary.org/obo/BTO_0001950,HuH-7 cell,,Human hepatoma cell line.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,BTO:0001950,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/bto.owl,,,,,,,,,HuH-7 cell,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Human hepatoma cell line.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102185,ISCO sampling device,,"A specimen collection device manufactured by Teledyne ISCO designed to collect discrete or composite samples from environmental media according to predefined time intervals, flow conditions, or external triggers.",FALSE,,,,,,,ISCO sampler,,,,,,,"Commonly used in water and wastewater monitoring and supports multiple sampling modes (e.g., grab, composite, flow-proportional). Typically programmable and may integrate with sensors (e.g., flow meters).",,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102185,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2026-04-13T19:52:38.515Z,,,,,,,,,,,,,,,,,,,ISCO sampling device,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A specimen collection device manufactured by Teledyne ISCO designed to collect discrete or composite samples from environmental media according to predefined time intervals, flow conditions, or external triggers.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03460775,copper added claim,,A claim that copper has been added to an edible product..,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=H0775,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03460775,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,copper added claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A claim that copper has been added to an edible product..,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_5543,Grepafloxacin,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:5543,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,Grepafloxacin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002149,strain identifier specification,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002149,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,strain identifier specification,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0001429,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510253,pregnant or lactating woman as food consumer,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0253,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510253,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pregnant or lactating woman as food consumer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_79020,"alpha,beta-unsaturated monocarboxylic acid",,A monocarboxylic acid in which the carbon of the carboxy group is directly attached to a C=C or C≡C bond.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:79020,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,"alpha,beta-unsaturated monocarboxylic acid",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A monocarboxylic acid in which the carbon of the carboxy group is directly attached to a C=C or C≡C bond.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490102,plastic squeeze bottle or tube,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0102,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490102,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,plastic squeeze bottle or tube,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0050700,cardiomyopathy,,A heart disease and a myopathy that is characterized by deterioration of the function of the heart muscle.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0050700,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,cardiomyopathy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A heart disease and a myopathy that is characterized by deterioration of the function of the heart muscle.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100478,risk assessment information field category,,A data field category which refers to risk assessment information fields.,FALSE,,,,,,,PCDS:risk_assessment_information_slot_group,,,,,,,,,,,,,,,,,,,,,,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100478,,,,,,,,,,,,,,2026-03-29T05:10:44.064Z,,,,,,,,,,,,,,,,,,,risk assessment information field category,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field category which refers to risk assessment information fields.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_33597,homocyclic compound,,A cyclic compound having as ring members atoms of the same element only.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:33597,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,homocyclic compound,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A cyclic compound having as ring members atoms of the same element only.,,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000190,threshold cycle,,Threshold cycle (or Ct or Cq) is a count which is defined as the fractional PCR cycle number at which the reporter fluorescence is greater than the threshold in the context of the RT-qPCR assay. The Ct is a basic principle of real time PCR and is an essential component in producing accurate and reproducible data.,FALSE,,,,,,,Ct|Cq,,,,,,,,,,,,,,http://www.ncbi.nlm.nih.gov/genome/probe/doc/TechQPCR.shtml,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000125,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000190,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,threshold cycle,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra|Orlaith Burke|Alejandra Gonzalez-Beltran,,,,Threshold cycle (or Ct or Cq) is a count which is defined as the fractional PCR cycle number at which the reporter fluorescence is greater than the threshold in the context of the RT-qPCR assay. The Ct is a basic principle of real time PCR and is an essential component in producing accurate and reproducible data.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_60004,mixture,,"A mixture is a chemical substance composed of multiple molecules, at least two of which are of a different kind.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:60004,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,mixture,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A mixture is a chemical substance composed of multiple molecules, at least two of which are of a different kind.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001262,obsolete: fluid - aspirate,,[WHICH DEFINITION?] See http://medical-dictionary.thefreedictionary.com/aspirate,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001262,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: fluid - aspirate,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,http://purl.obolibrary.org/obo/NCIT_C13347,,,[WHICH DEFINITION?] See http://medical-dictionary.thefreedictionary.com/aspirate,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510237,traditional composition claim,,"The uniquely identifiable composition (in terms of ingredients) that was first established prior to the Second World War and passed down through generations by oral or other means (taking into account cases where composition was abandoned for a time and then reinstated) and when necessary is differentiated from the composition defined by the generally recognized characteristics of the wider food group to which the product belongs. [Traditional Foods in Europe, EuroFIR Synthesis report No 6, 2009]",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0237,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510237,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,traditional composition claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The uniquely identifiable composition (in terms of ingredients) that was first established prior to the Second World War and passed down through generations by oral or other means (taking into account cases where composition was abandoned for a time and then reinstated) and when necessary is differentiated from the composition defined by the generally recognized characteristics of the wider food group to which the product belongs. [Traditional Foods in Europe, EuroFIR Synthesis report No 6, 2009]",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100220,place of worship exposure process,,A process occuring within or in the vicinity of a place of worship that exposes the recipient organism to a material entity.,FALSE,,,,,,,Place of Worship,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100220,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,place of worship exposure process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A process occuring within or in the vicinity of a place of worship that exposes the recipient organism to a material entity.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C15221,Dialysis,dialysis|Dialysis Therapy|Dialysis Procedure|Dialysis,A procedure to remove toxic substances from the blood that is used in patients with end-stage chronic kidney disease or acute kidney failure. This includes hemodialysis and peritoneal dialysis.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,dialysis|Dialysis Therapy|Dialysis Procedure|Dialysis,,,,NCIT:C15221,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Dialysis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A procedure to remove toxic substances from the blood that is used in patients with end-stage chronic kidney disease or acute kidney failure. This includes hemodialysis and peritoneal dialysis.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03305103,meat (cooked),,Meat which has been cooked.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://bioregistry.io/reference/siren:F5103,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03305103,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,meat (cooked),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Meat which has been cooked.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0032016,Abnormal sputum,Abnormal sputum morphology,"Abnormal appearance of material expectorated (coughed up) from the respiratory system and that is composed of mucus but may contain other substances such as pus, blood, microorganisms, and fibrin.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Abnormal sputum morphology,,,,HP:0032016,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal sputum,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Abnormal appearance of material expectorated (coughed up) from the respiratory system and that is composed of mucus but may contain other substances such as pus, blood, microorganisms, and fibrin.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001993,WXS strategy,,Random sequencing of exonic regions selected from the genome.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI SRA: WXS,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001993,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WXS strategy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Random sequencing of exonic regions selected from the genome.,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0005098,stroke disorder,"undetermined stroke|syndrome, stroke|stroke syndrome|stroke|cerebrovascular accident, (CVA)|cerebrovascular accident|CVA, cerebrovascular accident|CVA",A sudden loss of neurological function secondary to hemorrhage or ischemia in the brain parenchyma due to a vascular event.,FALSE,,,,,,,,,,,,,,"Stroke includes two main types, hemorrhagic and ischemic. Both types of stroke can cause acute seizures at the time of the acute event, as well as epilepsy as a long-term complication. In the elderly, cerebrovascular disease and stroke are the most common cause of acute seizures and epilepsy. (https://www.epilepsydiagnosis.org/etiology/stroke-overview.html, https://orcid.org/0000-0001-5208-3432)",,,,,,,,,,,,,,,,,,birnlex:12783|UMLS:C0038454|SCTID:230690007|NCIT:C3390|MESH:D020521|MEDGEN:52522|HP:0001297|EFO:0000712|DOID:0051061,,,,,,,,,,,,,,,,,,,,,,,,,"undetermined stroke|syndrome, stroke|stroke syndrome|stroke|cerebrovascular accident, (CVA)|cerebrovascular accident|CVA, cerebrovascular accident|CVA",,,,MONDO:0005098,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,stroke disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A sudden loss of neurological function secondary to hemorrhage or ischemia in the brain parenchyma due to a vascular event.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490110,"laminate tube, ends lined with foil",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0110,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490110,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"laminate tube, ends lined with foil",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_24628,"imidazolidine-2,4-dione",,An imidazolidinone with oxo groups at position 2 and 4.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:24628,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,"imidazolidine-2,4-dione",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An imidazolidinone with oxo groups at position 2 and 4.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100037,prior antiviral treatment,,Antiviral treatment administered prior to the current regimen or test.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100037,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,prior antiviral treatment,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Antiviral treatment administered prior to the current regimen or test.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001722,NCBI specimen voucher,,"The NCBI specimen voucher is an identifier composed of “institution code:collection code:specimen id” parts. In addition to a specimen identifier, it includes an institution-code (and optional collection-code) taken from a controlled vocabulary maintained by the INSDC that denotes the museum or herbarium collection where the specimen resides.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,UAM:Mamm:52179,,,,INSDC:specimen_voucher,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001722,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI specimen voucher,,,,,,,,,,,,,,,,,,,,,,http://www.insdc.org/controlled-vocabulary-specimenvoucher-qualifier.,,,,,,,,,,"The NCBI specimen voucher is an identifier composed of “institution code:collection code:specimen id” parts. In addition to a specimen identifier, it includes an institution-code (and optional collection-code) taken from a controlled vocabulary maintained by the INSDC that denotes the museum or herbarium collection where the specimen resides.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002057,obsolete: Siemens,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002057,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: Siemens,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ARO_3004407,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C128985,Minimum Inhibitory Concentration Test,Minimum Inhibitory Concentration Test|Minimum Inhibitory Concentration|MIC,"A laboratory test to determine the lowest concentration of a substance that will inhibit a biological or biochemical function, such as microorganism growth or enzymatic activity.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"NCIT offers this alternate definition which GenEpiO intends: 
""A measurement that specifies the minimum concentration of the agent at which organism growth was inhibited.""",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MIC,,Minimum Inhibitory Concentration Test|Minimum Inhibitory Concentration|MIC,,,,NCIT:C128985,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Minimum Inhibitory Concentration Test,,,,,,,,,,,,,,,,,,,,,,Clinical and Laboratory Standards Institute MIC antimicrobial testing standards at  http://em100.edaptivedocs.info/GetDoc.aspx?doc=CLSI%20M100%20S27:2017&scope=user,,,,,,,,,,"A laboratory test to determine the lowest concentration of a substance that will inhibit a biological or biochemical function, such as microorganism growth or enzymatic activity.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_4562,subacute bacterial endocarditis,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:4562,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,subacute bacterial endocarditis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001939,obsolete: Illumina HiSeq Sequencer,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,"Redundant with ""term replaced by"" entity.",,,,,,,,,,,,,,,,,,,GENEPIO:0001939,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: Illumina HiSeq Sequencer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0100110,,,,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0005113,bacterial infectious disease,"infection, bacterial|bacterial infectious disease|bacterial infection|bacterial disorder|bacterial disease|Bacteria infectious disease|Bacteria disease or disorder|Bacteria caused disease or disorder","An acute infectious disorder that is caused by gram positive or gram negative bacteria; representative examples include pneumococcal, streptococcal, salmonella, and meningeal infections.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0004623|SCTID:87628006|NCIT:C2890|MESH:D001424|MEDGEN:14012|ICD9:041.9|ICD9:041.89|ICD9:040.89|EFO:0000771|DOID:104,,,,,,,,,,,,,,,,,,,,,,,,,"infection, bacterial|bacterial infectious disease|bacterial infection|bacterial disorder|bacterial disease|Bacteria infectious disease|Bacteria disease or disorder|Bacteria caused disease or disorder",,,,MONDO:0005113,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,bacterial infectious disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An acute infectious disorder that is caused by gram positive or gram negative bacteria; representative examples include pneumococcal, streptococcal, salmonella, and meningeal infections.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530211,under glass/protected plant cultivation,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0211,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530211,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,under glass/protected plant cultivation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0080599,Coronavirus infectious disease,,A viral infectious disease that has_material_basis_in Coronavirus.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0080599,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,Coronavirus infectious disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A viral infectious disease that has_material_basis_in Coronavirus.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000052,CGF type,,Output of CGF.,FALSE,,,,,,,,,,,,,,,,,,,,,GROUP: IRIDA Ontology (Emma),,,,,,,pick list,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000052,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,,,,,,,CGF type,,,,,Lab Analytic,,,,,,,,,,,,,,,,,,,,,,CGF type,,,inferred from BCCDC interviews,,Output of CGF.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002166,unsigned long integer value specification,,A 64 bit integer ranging from 0 - 18446744073709551615,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002166,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,unsigned long integer value specification,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A 64 bit integer ranging from 0 - 18446744073709551615,,,,unsigned long integer,,,,
http://purl.obolibrary.org/obo/CHEBI_23765,quinolone,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:23765,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,quinolone,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0050491,meningovascular neurosyphilis,,"A tertiary neurosyphilis that results in inflammation located_in arteries of the brain or located_in arteries of spinal cord. The infection has_symptom headache, has_symptom neck stiffness, has_symptom dizziness, has_symptom behavioral abnormalities, has _symptom poor concentration, has_symptom memory loss, has _symptom lassitude, has_symptom insomnia, has_symptom blurred vision, has_symptom weakness and wasting of shoulder-girdle and arm muscles, has_symptom slowly progressive leg weakness with urinary or fecal incontinence or both, and has_symptom paralysis of the legs due to thrombosis of spinal arteries.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0050491,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,meningovascular neurosyphilis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A tertiary neurosyphilis that results in inflammation located_in arteries of the brain or located_in arteries of spinal cord. The infection has_symptom headache, has_symptom neck stiffness, has_symptom dizziness, has_symptom behavioral abnormalities, has _symptom poor concentration, has_symptom memory loss, has _symptom lassitude, has_symptom insomnia, has_symptom blurred vision, has_symptom weakness and wasting of shoulder-girdle and arm muscles, has_symptom slowly progressive leg weakness with urinary or fecal incontinence or both, and has_symptom paralysis of the legs due to thrombosis of spinal arteries.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_0050490,parenchymatous neurosyphilis,,"A tertiary neurosyphilis that results when chronic meningoencephalitis causes destruction of cortical parenchyma. The infection has_symptom irritability, has_symptom difficulty concentrating, has_symptom deterioration of memory, has_symptom defective judgment, has_symptom headaches, has_symptom insomnia, has_symptom fatigue, and has_symptom lethargy.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0050490,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,parenchymatous neurosyphilis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A tertiary neurosyphilis that results when chronic meningoencephalitis causes destruction of cortical parenchyma. The infection has_symptom irritability, has_symptom difficulty concentrating, has_symptom deterioration of memory, has_symptom defective judgment, has_symptom headaches, has_symptom insomnia, has_symptom fatigue, and has_symptom lethargy.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490221,adhesive,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0221,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490221,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,adhesive,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100080,cardiac transplant,,An individual who is receiving or has received a transplant of a heart.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100080,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,cardiac transplant,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An individual who is receiving or has received a transplant of a heart.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0002813,medical cap,,A personal protective device which is worn on the head that helps prevent transmission of contaminants contained in hair and scalp.,FALSE,,,,,,,surgical hat|scrub cap|medical bonnet|bouffant hat|bouffant cap,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Scrubs_(clothing),,,,,medical cap,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0002813,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,medical cap,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://orcid.org/0000-0002-8844-9165,,,https://github.com/obi-ontology/obi/issues/1193,A personal protective device which is worn on the head that helps prevent transmission of contaminants contained in hair and scalp.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000045,PFGE test specification,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0000048|http://purl.obolibrary.org/obo/GENEPIO_0000046,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000045,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,,,,,,,PFGE test specification,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001085,HIV status,,"",FALSE,,,,,,,,,,,,,,,,,,,,,"",,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001085,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HIV status,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"",,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_3418604,Betacoronavirus pandemicum,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,Betacoronavirus pandemicum,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:3418604,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Betacoronavirus pandemicum,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_24396,glycopeptide,,Any carbohydrate derivative that consists of glycan moieties covalently attached to the side chains of the amino acid residues that constitute the peptide.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:5478|CHEBI:24395,,,,,,CHEBI:24396,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,glycopeptide,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any carbohydrate derivative that consists of glycan moieties covalently attached to the side chains of the amino acid residues that constitute the peptide.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0007221,neonate stage,puggle stage|puggle|pouch stage|nestling stage|infant stage|hatchling stage|hatchling|fledgling stage,"Of or pertaining to the period of time immediately following birth, or to the newborn.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://neurolex.org/wiki/Category:Newborn_organism|http://neurolex.org/wiki/Category:Infant_organism|Wikipedia:Infant|SscrDv:0000009|RnorDv:0000013|OGES:000025|NIF_Organism:birnlex_695|MmusDv:0000036|MmulDv:0000046|MdomDv:0000004|HsapDv:0000262|EV:0300037|ChirDv:0000017|BTO:0001762,,,,,,,,,,,,,,,,,,,,,,,,,neonatal stage,puggle stage|puggle|pouch stage|nestling stage|infant stage|hatchling stage|hatchling|fledgling stage,,,UBERON:0007221,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,neonate stage,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Of or pertaining to the period of time immediately following birth, or to the newborn.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0007222,late adult stage,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0001792|SscrDv:0000008|RnorDv:0000060|PtroDv:0000039|PpanDv:0000040|OcunDv:0000006|OariDv:0000008|OanaDv:0000006|NIF_Organism:birnlex_691|NCIT:C16268|MmusDv:0000134|MmulDv:0000045|MdomDv:0000025|HsapDv:0000227|GgorDv:0000008|GgalDv:0000080|FcatDv:0000006|EcabDv:0000006|EV:0300123|CporDv:0000006|ChirDv:0000050|CfamDv:0000006|BtauDv:0000006|AcarDv:0000006,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0007222,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,late adult stage,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03430145,"sliced, thin, below 0.5 cm.",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=E0145,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03430145,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"sliced, thin, below 0.5 cm.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0000895,total RNA extract,,A RNA extract that is the output of an extraction process in which total celluar and organelle RNA molecules are isolated from a specimen.,FALSE,,,,,,,,,,,,,,,,,,,,,UPenn Group,,,,,total RNA extract,,Extraction of total RNA from cells with Qiagen mini RNeasy kit,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0000895,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,total RNA extract,,,,,,,,,,,,,,,,,,,,,,,,,,,,PERSON: Jie Zheng|PERSON: Chris Stoeckert,,,,A RNA extract that is the output of an extraction process in which total celluar and organelle RNA molecules are isolated from a specimen.,,,,,,,,
http://purl.obolibrary.org/obo/IAO_0000109,measurement datum,,A measurement datum is an information content entity that is a recording of the output of a measurement such as produced by a device.,FALSE,,,,,,,,,,,,,,,,,,,,,group:OBI|OBI_0000305,,,,2/2/2009 is_specified_output of some assay?,measurement datum,,,,,http://purl.obolibrary.org/obo/IAO_0000125,http://www.ebi.ac.uk/efo/EFO_0001444,,,,,,,,,,,,,,,,,,,,,,,,,,,,,IAO:0000109,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/iao.owl|http://purl.obolibrary.org/obo/cob.owl|http://purl.obolibrary.org/obo/apollo_sv.owl,,,,,,,,,measurement datum,,,,,,,,,,,,,,,,,,,,,,,,,,,,person:Chris Stoeckert,,,,A measurement datum is an information content entity that is a recording of the output of a measurement such as produced by a device.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100773,water catchment area human population measurement value,water catchment human population measurement value,An environmental data field which describes the numerical value of the human population measurement that contributes to the composition of water in a catchment area.,FALSE,,,,,,,PCDS:water_catchment_area_human_population_measurement_value,,,,,,,"PCDS: Where known, provide the numerical value of population size, i.e. the number of people.",,,,,,,,,,,,,,PCDS: 10500,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,water catchment human population measurement value,water catchment human population measurement value slot,,,,GENEPIO:0100773,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,water catchment area human population measurement value,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the numerical value of the human population measurement that contributes to the composition of water in a catchment area.,,PCDS: The numerical value of the human population measurement that contributes to the composition of water in a catchment area.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100019,obsolete: cluster/outbreak investigation strategy,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100019,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: cluster/outbreak investigation strategy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0100001,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001423,genomic sequencing annotation datum,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001423,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,genomic sequencing annotation datum,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C27583,Infectious Disorder by Site,Infectious Disorder by Site,A term that refers to the classification of an infectious disorder according to the anatomic site that is involved in the pathologic process.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Infectious Disorder by Site,,,,NCIT:C27583,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Infectious Disorder by Site,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A term that refers to the classification of an infectious disorder according to the anatomic site that is involved in the pathologic process.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001386,host (common name),host (common name),A host field which describes the commonly used name of the host.,FALSE,,,,,,,PCDS:host_common_name,,,,,,,"PCDS: Provide the commonly used (vernacular) name of the host organism. Use a term from the pick list provided. If known, the scientific (taxonomic) name should be recorded separately in host_scientific_name.",,,,,,,,,,,,,,PCDS: Human,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,host (common name),host (common name) slot,,,,GENEPIO:0001386,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,host (common name),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A host field which describes the commonly used name of the host.,,PCDS: The commonly used name of the host.,,,,,,
http://purl.obolibrary.org/obo/STATO_0000411,positive likelihood ratio,,the likelihood ratio of positive results is a ratio which is form by dividing the sensitivity value of a test by the difference between 1 and specificity of the test. This can be expressed also as dividing the probability of the test giving a positive result when testing an affected subject versus the probability of the test giving a positive result when a subject is not affected.,FALSE,,,,,,,likelihood ratio for positive results,,,,,,,,,,,,,,"adapted from Wikipedia:
https://en.wikipedia.org/wiki/Likelihood_ratios_in_diagnostic_testing

last accessed: May 2016",,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000411,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,positive likelihood ratio,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra,,,,the likelihood ratio of positive results is a ratio which is form by dividing the sensitivity value of a test by the difference between 1 and specificity of the test. This can be expressed also as dividing the probability of the test giving a positive result when testing an affected subject versus the probability of the test giving a positive result when a subject is not affected.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001342,data specification,,"A data specification is a specification of a data structure that can hold a categorical, textual or numeric variable, or that has such variables or other data structures as component parts.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"A data standard, may be defined as a data specification, but a data specification isn't necessarily a formal or de-facto data standard - it would have to be sanctioned by a community of users and developers to take on that status.",,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001342,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,data specification,,,,,,,,,,,,,,,,,,,,,,https://www.iso.org/deliverables-all.html,,,,,,Damion Dooley,,,,"A data specification is a specification of a data structure that can hold a categorical, textual or numeric variable, or that has such variables or other data structures as component parts.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490244,crown cap,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0244,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490244,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,crown cap,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0101077,AMR analysis software version,AMR analysis software version,A data field which describes the version number of the software used to perform an in silico antimicrobial resistance determinant idenrtification or analysis.,FALSE,,,,,,,PCDS:amr_analysis_software_version,,,,,,,PCDS: Provide the version number of the software used for AMR analysis.,,,,,,,,,,,,,,PCDS: 6.0.3,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,AMR analysis software version,AMR analysis software version slot,,,,GENEPIO:0101077,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,AMR analysis software version,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the version number of the software used to perform an in silico antimicrobial resistance determinant idenrtification or analysis.,,PCDS: The version number of the software used to perform an in silico antimicrobial resistance determinant identification/analysis.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001075,obsolete: E. coli serotype part,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001075,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: E. coli serotype part,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0001686,,,,,,,,,,,
http://purl.obolibrary.org/obo/HP_0000005,Mode of inheritance,Inheritance,The pattern in which a particular genetic trait or disorder is passed from one generation to the next.,FALSE,,,,,,,,,,,,,,"While there is a close conceptual relationship between allelic requirement and inheritance, they serve different purposes; allelic requirement is necessary for variant annotation pipelines and to determine if a given variant in a specific context is relevant to the phenotype of the patient e.g. a heterozygous variant (in the absence of compound heterozygosity) is relevant for dominant but not for recessive disease; while inheritance is used for describing the mode of inheritance of a phenotype and is particularly applicable in the clinical setting for communicating recurrence risk, to guide family screening, and to guide reproductive advice.",,,,,,,,,,,,,,,,,,UMLS:C1708511,,,,,,,,,,,,,,,,,,,,,,,HP:0010985|HP:0001461|HP:0001453|HP:0001425,,Inheritance,,,,HP:0000005,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Mode of inheritance,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The pattern in which a particular genetic trait or disorder is passed from one generation to the next.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_38314,pyrazines,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:38314,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,pyrazines,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000027,spring,,A surface landform which provides an egress for groundwater or steam to flow out of the ground.,FALSE,,,,,,,,,,,,,,Springs are typically where an aquifer surface meets the ground surface or where there is a fissure.,,,,,,,,,,,,,,,,,,TGN:21126|SWEETRealm:Spring|Geonames:H.SPNG|FTT:982|EcoLexicon:spring,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00000027,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,spring,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A surface landform which provides an egress for groundwater or steam to flow out of the ground.,,,,,,,,
http://www.ebi.ac.uk/efo/EFO_0008007,age at assessment,,The age of an individual at the time an assessment takes place,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PMID:20634892,,,,,,,,,,,,,,,,,,,,,,,,,,,,,efo:EFO_0008007,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age at assessment,,,,,,,,,,,,,,,,,,,,,,,,,,,,Dani Welter,,,,The age of an individual at the time an assessment takes place,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510187,halal claim,,Characterized by adherence to the dietary practices required by Islamic law (Webster's).,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0187,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510187,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,halal claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Characterized by adherence to the dietary practices required by Islamic law (Webster's).,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000584,table,,"A table is a form of furniture with a flat horizontal upper surface used to support objects, for storage, show, and/or manipulation.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01000584,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,table,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A table is a form of furniture with a flat horizontal upper surface used to support objects, for storage, show, and/or manipulation.",,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0021094,immunodeficiency disease,immunodeficiency disorder|immunodeficiency|immuno-deficiency,"Disease in which there is a deficiency or defect in the mechanisms of immunity, either cellular or humoral.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0021051|SCTID:234532001|OMIMPS:300755|NCIT:C3131|NANDO:2100204|MEDGEN:7034|ICD9:279.3,,,,,,,,,,,,,,,,,,,,,,,,,immunodeficiency disorder|immunodeficiency|immuno-deficiency,,,,MONDO:0021094,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar|http://purl.oboInOwllibrary.org/oboInOwl/mondo#clingen,,,,,,,,immunodeficiency disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Disease in which there is a deficiency or defect in the mechanisms of immunity, either cellular or humoral.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000205,beef ribeye roll (lip on),,A rib primal cut without the cap. It includes the lip.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000205,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef ribeye roll (lip on),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A rib primal cut without the cap. It includes the lip.,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0002602,central nervous system disorder,disorder of central nervous system|disease or disorder of central nervous system|disease of the central nervous system|disease of central nervous system|central nervous system disorder|central nervous system disease or disorder|central nervous system disease|central nervous disease|CNS disorder,A disease involving the central nervous system.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4021765|SCTID:23853001|NCIT:C2934|MESH:D002493|MEDGEN:892343|EFO:0009386|DOID:331,,,,,,,,,,,,,,,,,,,,,,,,,disorder of central nervous system|disease or disorder of central nervous system|disease of the central nervous system|disease of central nervous system|central nervous system disorder|central nervous system disease or disorder|central nervous system disease|central nervous disease|CNS disorder,,,,MONDO:0002602,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#rare_grouping|http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,central nervous system disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A disease involving the central nervous system.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00003304,beef T-bone steak,,A beef steak that is prepared from the beef short loin. The maximum width of the tenderloin must be at least 1/2 inch (13mm) when measured parallel to the length of the backbone.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00003304,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef T-bone steak,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A beef steak that is prepared from the beef short loin. The maximum width of the tenderloin must be at least 1/2 inch (13mm) when measured parallel to the length of the backbone.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0015472,tracheobronchial lymph node,bronchial lymph node,A lymph node located near the bifurcation of the trachea.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Tracheobronchial_lymph_nodes|UMLS:C0229751|SCTID:245341003|NCIT:C77651|MA:0003068|FMA:5950,,,,,,,,,,,,,,,,,,,,,,,UBERON:0016381,,tracheobronchial node|tracheobronchal node|tracheobronchal lymph node|nodus tracheobronchiale lymphaticus,bronchial lymph node,,,UBERON:0015472,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,tracheobronchial lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A lymph node located near the bifurcation of the trachea.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_13248,anilide,,Any aromatic amide obtained by acylation of aniline.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:13248,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,anilide,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any aromatic amide obtained by acylation of aniline.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_33563,glycolipid,,"Any member of class of 1,2-di-<em>O</em>-acylglycerols joined at oxygen 3 by a glycosidic linkage to a carbohydrate part (usually a mono-, di- or tri-saccharide). Some substances classified as bacterial glycolipids have the sugar part acylated by one or more fatty acids and the glycerol part may be absent.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:5476|CHEBI:24393,,,,,,CHEBI:33563,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,glycolipid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Any member of class of 1,2-di-<em>O</em>-acylglycerols joined at oxygen 3 by a glycosidic linkage to a carbohydrate part (usually a mono-, di- or tri-saccharide). Some substances classified as bacterial glycolipids have the sugar part acylated by one or more fatty acids and the glycerol part may be absent.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100489,transport truck driver,,A transport worker role inhering in a person that is realized when the bearer is the driver of a transport truck.,FALSE,,,,,,,Transport Truck Driver,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100489,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-01-23T00:42:19.315Z,,,,,,,,,,,,,,,,,,,transport truck driver,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A transport worker role inhering in a person that is realized when the bearer is the driver of a transport truck.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001698,listeria serotype 4b,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001698,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,listeria serotype 4b,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100218,ski resort exposure process,,A process occuring within or in the vicinity of a ski resort that exposes the recipient organism to a material entity.,FALSE,,,,,,,Ski Resort,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100218,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,ski resort exposure process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A process occuring within or in the vicinity of a ski resort that exposes the recipient organism to a material entity.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100209,long-term care facility exposure process,LTC facility,A process occuring within or in the vicinity of a long-term care facility that exposes the recipient organism to a material entity.,FALSE,,,,,,,Long-Term Care Facility,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,LTC facility,,,,GENEPIO:0100209,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,long-term care facility exposure process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A process occuring within or in the vicinity of a long-term care facility that exposes the recipient organism to a material entity.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00005163,vitamin A rich label claim,,A food product containing a quantity of vitamin A large enough to make a significant contribution to nutritional needs.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00005163,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,vitamin A rich label claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A food product containing a quantity of vitamin A large enough to make a significant contribution to nutritional needs.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0006562,pharynx,,The pharynx is the part of the digestive system immediately posterior to the mouth[GO].,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MIAA:0000049|MESH:D010614|MAT:0000049,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0006562,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,pharynx,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The pharynx is the part of the digestive system immediately posterior to the mouth[GO].,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000005,first-order administrative region,,"A primary administrative division of a country, such as a state in the United States.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,TGN:81100|Geonames:A.ADM1|FTT:569|FTT:414,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00000005,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,first-order administrative region,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A primary administrative division of a country, such as a state in the United States.",,,lookup:http://purl.obolibrary.org/obo/GAZ_00000448,state / province / territory / region,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002160,email address specification,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002160,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,email address specification,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/NCIT_C42775,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490389,phenonile resin container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0389,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490389,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,phenonile resin container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03411297,vertebrate animal,,"A vertebrate animal is any species of organism within the subphylum Vertebrata (chordates with backbones). Vertebrates represent the overwhelming majority of the phylum Chordata, with currently about 69,276 species described.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=B1297,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03411297,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,vertebrate animal,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A vertebrate animal is any species of organism within the subphylum Vertebrata (chordates with backbones). Vertebrates represent the overwhelming majority of the phylum Chordata, with currently about 69,276 species described.",,,,,,,,
https://w3id.org/linkml/Element,Element,,A named element in the model.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,linkml:Element,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A named element in the model.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490136,"glass container, plastic lid, plastic lining",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0136,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490136,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"glass container, plastic lid, plastic lining",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001095,sequence number,,A sequence number is a numeric identifier of a sequence with respect to a particular data table or dataset.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Tb_1 (with respect to an Illumina SampleSheet.csv spreadsheet)
13 (with respect to a ReSeqTB SNP pipeline sample report)",,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001095,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,sequence number,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A sequence number is a numeric identifier of a sequence with respect to a particular data table or dataset.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000162,beef bottom sirloin butt (raw),,A raw beef bottom sirloin butt.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000162,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef bottom sirloin butt (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef bottom sirloin butt.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001538,exposed person role,,"An exposed person role is the role a person takes on who has been exposed to a pathogen.  In serious situations this may call for special treatment, e.g. quarantine.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001538,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,exposed person role,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"An exposed person role is the role a person takes on who has been exposed to a pathogen.  In serious situations this may call for special treatment, e.g. quarantine.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102272,prior antiviral treatment,,A data field which describes the absence or presence of antiviral treatment for a prior pathogen infection.,FALSE,,,,,,,PCDS:prior_antiviral_treatment,,,,,,,"PCDS: If known, provide information about whether the individual had a previous pathogen antiviral treatment. Select a value from the pick list.",,,,,,,,,,,,,,PCDS: Prior antiviral treatment,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102272,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2026-04-09T18:02:29.914Z,,,,,,,,,,,,,,,,,,,prior antiviral treatment,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the absence or presence of antiviral treatment for a prior pathogen infection.,,PCDS: The absence or presence of antiviral treatment for a prior pathogen infection.,,,,,,
http://purl.obolibrary.org/obo/FOODON_03460292,curing or aging 4 to 6 months,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=H0292,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03460292,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,curing or aging 4 to 6 months,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C70909,Mechanical Ventilation,Mechanical ventilation|Mechanical Ventilation|MECHANICAL VENTILATION,A method to mechanically assist or replace spontaneous breathing in patients by use of a powered device that forces oxygenated air into the lungs.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Mechanical ventilation|Mechanical Ventilation|MECHANICAL VENTILATION,,,,NCIT:C70909,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Mechanical Ventilation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A method to mechanically assist or replace spontaneous breathing in patients by use of a powered device that forces oxygenated air into the lungs.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03500050,food contact surface from natural material,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=N0050,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03500050,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food contact surface from natural material,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_13431,bejel,,"A primary bacterial infectious disease that results in infection located in mucosa of mouth, located in skin or located in bone, has_material_basis_in Treponema pallidum subsp endemicum, which is transmitted by contact or transmitted by sharing of domestic utensils. The infection has symptom moist patches in the mouth, has symptom lumps in long bones, tissues around the mouth, nose, and roof of the mouth. These lumps destroy tissue, causing bones to be deformed and disfiguring the face.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:13431,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,bejel,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A primary bacterial infectious disease that results in infection located in mucosa of mouth, located in skin or located in bone, has_material_basis_in Treponema pallidum subsp endemicum, which is transmitted by contact or transmitted by sharing of domestic utensils. The infection has symptom moist patches in the mouth, has symptom lumps in long bones, tissues around the mouth, nose, and roof of the mouth. These lumps destroy tissue, causing bones to be deformed and disfiguring the face.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510120,"\""fresh\""label claim",,"A raw food that has not been frozen, heat processed or otherwise preserved.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510120,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"""fresh""label claim",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A raw food that has not been frozen, heat processed or otherwise preserved.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_63845,sulfacetamide,,A sulfonamide that is sulfanilamide acylated on the sulfonamide nitrogen.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:63845,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,sulfacetamide,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A sulfonamide that is sulfanilamide acylated on the sulfonamide nitrogen.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_60911,racemate,,A racemate is an equimolar mixture of a pair of enantiomers.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:60911,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,racemate,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A racemate is an equimolar mixture of a pair of enantiomers.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0001097,axillary lymph node,axillary node,"The lymph nodes located around the axillary vein that receive lymphatic drainage from the upper or forelimb, scapular region and pectoral region.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Axillary_lymph_nodes|UMLS:C0729594|SCTID:181759007|NCIT:C12904|MA:0000735|FMA:276805,,,,,,,,,,,,,,,,,,,,,,,,,axillary node,,,,UBERON:0001097,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,axillary lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The lymph nodes located around the axillary vein that receive lymphatic drainage from the upper or forelimb, scapular region and pectoral region.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0001090,synovial fluid,joint fluid,Joint fluid is a transudate of plasma that is actively secreted by synovial cells.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:SynovialFluid|ZFA:0005154|Wikipedia:Synovial_fluid|UMLS:C0039097|TAO:0005154|NCIT:C33718|MESH:D013582|MA:0002544|GAID:265|FMA:12277|ENVO:02000039|CALOHA:TS-0996|BTO:0001339,,,,,,,,,,,,,,,,,,,,,,,,,joint fluid,,,,UBERON:0001090,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,synovial fluid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Joint fluid is a transudate of plasma that is actively secreted by synovial cells.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_474014,dirithromycin,,"The hemi-aminal resulting from the condensation of the erythromycin derivative (9<i>S</i>)-erythromycyclamine with 2-(2-methoxyethoxy)acetaldehyde. As the oxazine ring containing the hemi-aminal group is unstable under both acidic and alkaline conditions, dirithromycin functions as a more lipid-soluble prodrug for (9<i>S</i>)-erythromycyclamine. Administered as enteric coated tablets to protect it from acid catalysed hydrolysis in the stomach, it is used to treat respiratory tract, skin, and soft tissue infections caused by susceptible organisms.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:474014,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,dirithromycin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The hemi-aminal resulting from the condensation of the erythromycin derivative (9<i>S</i>)-erythromycyclamine with 2-(2-methoxyethoxy)acetaldehyde. As the oxazine ring containing the hemi-aminal group is unstable under both acidic and alkaline conditions, dirithromycin functions as a more lipid-soluble prodrug for (9<i>S</i>)-erythromycyclamine. Administered as enteric coated tablets to protect it from acid catalysed hydrolysis in the stomach, it is used to treat respiratory tract, skin, and soft tissue infections caused by susceptible organisms.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001971,transcriptomic source,,"Transcription products or non genomic DNA (EST, cDNA, RT-PCR, screened libraries).",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI SRA: TRANSCRIPTOMIC,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001971,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,transcriptomic source,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"Transcription products or non genomic DNA (EST, cDNA, RT-PCR, screened libraries).",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000250,lamb shoulder arm roast (raw),,A raw lamb shoulder arm roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000250,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lamb shoulder arm roast (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw lamb shoulder arm roast.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03500057,food-grade natural-based polymer surface,,A surface made of polymer extracted from nature.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=N0057,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03500057,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food-grade natural-based polymer surface,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A surface made of polymer extracted from nature.,,,,,,,,
http://purl.obolibrary.org/obo/PATO_0001470,ratio,quotient|proportionality to|proportionality|proportion,A quality inhering in a bearer by virtue of the bearer's magnitude in proportion to the magnitude of another entity.,FALSE,,,,,,,,,,,,,,Examples: height to weight; brain size to body size; root to shoot ratio; urinary sodium to potassium ratio. waist-hip ratio.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,quotient|proportionality to|proportionality|proportion,,,,PATO:0001470,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/pato.owl,http://purl.oboInOwllibrary.org/oboInOwl/pato#relational_slim|http://purl.oboInOwllibrary.org/oboInOwl/pato#attribute_slim,,,,,,,,ratio,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A quality inhering in a bearer by virtue of the bearer's magnitude in proportion to the magnitude of another entity.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102199,million gallons per day,,A volumetric flow rate unit which is the measure of the volume of one million gallons of matter crosses a given surface during the period of time equal to one day.,FALSE,,,,,,,MG/D,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102199,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2026-04-13T19:52:38.515Z,,,,,,,,,,,,,,,,,,,million gallons per day,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A volumetric flow rate unit which is the measure of the volume of one million gallons of matter crosses a given surface during the period of time equal to one day.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0002007,SOLiD 3 Plus System,,"A DNA sequencer which is manufacted by the Applied Biosystems corporation. Built upon SOLiD sequencing technology, the machine generates greater than 1 billion mappable reads per run.",FALSE,,,,,,,Applied Biosystems SOLiD 3 Plus System,,,,,,,,,,,,,,http://www3.appliedbiosystems.com/cms/groups/mcb_marketing/documents/generaldocuments/cms_072050.pdf,,,,,SOLiD 3 Plus System,,"Vissers, Lisenka ELM, et al. ""A de novo paradigm for mental retardation."" Nature genetics 42.12 (2010): 1109-1112. PMID:21076407",,,http://purl.obolibrary.org/obo/IAO_0000120,NCBI SRA: AB SOLiD 3 Plus System,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0002007,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SOLiD 3 Plus System,,,,,,,,,,,,,,,,,,,,,,,,,,,,"PERSON: Venkat Malladi, Chris Stoeckert, Jie Zheng, Alan Ruttenberg",,,,"A DNA sequencer which is manufacted by the Applied Biosystems corporation. Built upon SOLiD sequencing technology, the machine generates greater than 1 billion mappable reads per run.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0037601,left parietal lumbar lymph node,left parietal lumbar node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:16602,,,,,,,,,,,,,,,,,,,,,,,,,left parietal lumbar node,,,,UBERON:0037601,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,left parietal lumbar lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001255,lab host,lab host,A data field which describes the name and description of the laboratory host used to propagate the source organism or material from which the sample was obtained.,FALSE,,,,,,,PCDS:lab_host,,,,,,,"PCDS: Type of cell line used for propagation. Select a value form the pick list. If not passaged, put 'not applicable'.",,,,,,,,,,,,,,PCDS: Vero/hSLAM,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,lab host,lab host slot,,,,GENEPIO:0001255,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,lab host,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the name and description of the laboratory host used to propagate the source organism or material from which the sample was obtained.,,PCDS: Name and description of the laboratory host used to propagate the source organism or material from which the sample was obtained.,,,,,,
http://purl.obolibrary.org/obo/MPATH_603,pathological anatomical entity,,Anatomically located instance of pathological response or entity.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MPATH:603,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mpath.owl,,,,,,,,,pathological anatomical entity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Anatomically located instance of pathological response or entity.,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_35531,Mus musculus bactrianus,,,FALSE,,,,,,,southwestern Asian house mouse,,,,,,,,,,,,,,,,,,,Mus musculus bactrianus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:35531,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Mus musculus bactrianus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0024623,otorhinolaryngologic disease,"otorhinolaryngologic disease|otolaryngologic disorder|ear/nose/throat disease|ear, nose or throat disorder|ear, nose and throat disorder","Pathological processes of the ear, the nose, and the throat, also known as the ENT diseases.",FALSE,,,,,,,,,,,,,,Editor note: consider uberon class,,,,,,,,,,,,,,,,,,UMLS:C0395797|SCTID:232208008|NCIT:C118420|NANDO:1100015|MESH:D010038|MEDGEN:583054|ICD9:478.19,,,,,,,,,,,,,,,,,,,,,,,,,"otorhinolaryngologic disease|otolaryngologic disorder|ear/nose/throat disease|ear, nose or throat disorder|ear, nose and throat disorder",,,,MONDO:0024623,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#rare_grouping|http://purl.oboInOwllibrary.org/oboInOwl/mondo#harrisons_view,,,,,,,,otorhinolaryngologic disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Pathological processes of the ear, the nose, and the throat, also known as the ENT diseases.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000046,PFGE primary test,,First PFGE pattern from given diagnostic restriction enzyme,FALSE,,,,,,,,,,,,,,,,,,,,,GROUP: IRIDA Ontology (Emma),,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000046,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,,,,,,,PFGE primary test,,,,,Lab Analytic,,,,,,,,,,,,,,,,,,,,,,Host Primary PFGE Pattern,,,NML LIMS,,First PFGE pattern from given diagnostic restriction enzyme,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100008,screening for Variants of Concern strategy,screening for VoC|screening for VOC,A targeted surveillance strategy in which the aim is early detection of variants of concern (VoC) in individuals.,FALSE,,,,,,,Screening for Variants of Concern (VoC),,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,screening for VoC|screening for VOC,,,,GENEPIO:0100008,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,screening for Variants of Concern strategy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A targeted surveillance strategy in which the aim is early detection of variants of concern (VoC) in individuals.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001088,drug abuse status,,"",FALSE,,,,,,,,,,,,,,,,,,,,,"",,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001088,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,drug abuse status,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000035,dissolved oxygen concentration,,An environmental datum which describes the concentration of dissolved oxygen in a sample.,FALSE,,,,,,,,,,,,,,,,,,,,,GROUP: MIxS enviro package,,,,,,,micromole per kilogram,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000035,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,,,,,,,dissolved oxygen concentration,,,,,Environmental Isolate,,,,,,,,,,,,,,,,,,,,,,Dissolved oxygen,,,GROUP: MIxS,,An environmental datum which describes the concentration of dissolved oxygen in a sample.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_37922,arbekacin,,A kanamycin that is kanamycin B bearing an <em>N</em>-(2<i>S</i>)-4-amino-2-hydroxybutyryl group on the aminocyclitol ring.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:37922,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,arbekacin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A kanamycin that is kanamycin B bearing an <em>N</em>-(2<i>S</i>)-4-amino-2-hydroxybutyryl group on the aminocyclitol ring.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100113,Illumina HiSeq X Ten,Illumina HiSeq X 10,A DNA sequencer that consists of a set of 10 HiSeq X Sequencing Systems.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,Illumina HiSeq X 10,,,,GENEPIO:0100113,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,Illumina HiSeq X Ten,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A DNA sequencer that consists of a set of 10 HiSeq X Sequencing Systems.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001744,0D space,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001744,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,0D space,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C69257,Subject Name,patient_first_name|patient first name|Subject Name,The name of the individual of interest.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,patient_first_name|patient first name|Subject Name,,,,NCIT:C69257,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Subject Name,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The name of the individual of interest.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0491,Sri Lankan,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0491,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Sri Lankan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0496,Malaysian,Malay,Individuals who self-identify or are reported by authors as living in or originating from Malaysia.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Malay,,,,HANCESTRO:0496,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Malaysian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Individuals who self-identify or are reported by authors as living in or originating from Malaysia.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0495,Lao,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0495,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Lao,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0498,Filipino,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0498,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Filipino,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0493,Cambodian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0493,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Cambodian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0492,Bruneian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0492,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Bruneian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0497,Burmese,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0497,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Burmese,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0494,Indonesian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0494,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Indonesian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0490,Pakistani,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0490,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Pakistani,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HP_0012381,Delayed self-feeding during toddler years,,A delay in the development of skills required to feed oneself in the toddler period (between one and three years of age).,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4022920,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0012381,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Delayed self-feeding during toddler years,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A delay in the development of skills required to feed oneself in the toddler period (between one and three years of age).,,,,,,,,
http://purl.obolibrary.org/obo/HP_0012387,Bronchitis,,Inflammation of the large airways in the lung including any part of the bronchi from the primary bronchi to the tertiary bronchi.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0006277|SNOMEDCT_US:32398004,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0012387,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Bronchitis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Inflammation of the large airways in the lung including any part of the bronchi from the primary bronchi to the tertiary bronchi.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100638,prior infection field,prior infection slot,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,(2026-02-28) Under review for deprecation.,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,prior infection slot,,,,GENEPIO:0100638,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788,2023-01-01T03:32:48.197Z,,,,,,,,,,,,,,,,,,,prior infection field,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001580,obsolete: NCBI SRA model,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001580,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: NCBI SRA model,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0000147,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_47891,steroid acid,,Any steroid substituted by at least one carboxy group.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:47891,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,steroid acid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any steroid substituted by at least one carboxy group.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001404,host vaccination status,host vaccination status,A data field which describes the vaccination status of the host.,FALSE,,,,,,,PCDS:host_vaccination_status,,,,,,,PCDS: Select the vaccination status of the host from the pick list.,,,,,,,,,,,,,,PCDS: Not Vaccinated,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,host vaccination status,host vaccination status slot,,,,GENEPIO:0001404,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,host vaccination status,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the vaccination status of the host.,,"PCDS: The vaccination status of the host (fully vaccinated, partially vaccinated, or not vaccinated).",,,,,,
http://purl.obolibrary.org/obo/ENVO_03501145,emergency unit room,emergency ward room|emergency room room|emergency department room|casualty department room|accident & emergency department room|EW room|ER room|A&E room,A room in which emergency medical care is provided.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,emergency ward room|emergency room room|emergency department room|casualty department room|accident & emergency department room|EW room|ER room|A&E room,,,,ENVO:03501145,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,emergency unit room,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A room in which emergency medical care is provided.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490120,"paper bag, sack or pouch",,A soft-sided paper container that is used as a bag.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490120,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"paper bag, sack or pouch",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A soft-sided paper container that is used as a bag.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0031677,Polymorphic ventricular tachycardia,,"A type of ventricular tachycardia that is characterized by variable QRS complexes within each lead (i.e., QRS complexes may be different from beat to beat).",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0031677,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Polymorphic ventricular tachycardia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A type of ventricular tachycardia that is characterized by variable QRS complexes within each lead (i.e., QRS complexes may be different from beat to beat).",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002019,host hospital service status,,A host hospital service status indicates the state of a host's interaction with hospital medical services.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002019,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,host hospital service status,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A host hospital service status indicates the state of a host's interaction with hospital medical services.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C93210,Inflammatory Disorder,Inflammatory_Disease|Inflammatory Disorder|Inflammatory Disease,"An infectious or non infectious disorder characterized by signs and symptoms derived from focal or extensive tissue infiltration by acute (e.g., polymorphonuclear) or chronic (e.g., lymphocytic-plasmacytic) inflammatory cells. Representative examples of infectious disorders include viral infections, bacterial infections, and parasitic infections. Representative examples of non-infectious inflammatory disorders include inflammatory bowel disease and inflammatory polyps.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Inflammatory_Disease|Inflammatory Disorder|Inflammatory Disease,,,,NCIT:C93210,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Inflammatory Disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An infectious or non infectious disorder characterized by signs and symptoms derived from focal or extensive tissue infiltration by acute (e.g., polymorphonuclear) or chronic (e.g., lymphocytic-plasmacytic) inflammatory cells. Representative examples of infectious disorders include viral infections, bacterial infections, and parasitic infections. Representative examples of non-infectious inflammatory disorders include inflammatory bowel disease and inflammatory polyps.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490133,"glass container, plastic lid, laminate lining",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0133,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490133,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"glass container, plastic lid, laminate lining",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/BFO_0000029,site,,"Note that this can refer to a material entity like an organ or muscle, or an immaterial entity (a site or fiat boundary) like skin, stomach cavity or lung surface.",FALSE,,,,,,,,,,,,,,"Note that this can refer to a material entity like an organ or muscle, or an immaterial entity (a site or fiat boundary) like skin, stomach cavity or lung surface.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,BFO:0000029,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/cob.owl,,,,,,,,,site,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03317479,"fish fillet (deep-frozen, unprocessed)",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://bioregistry.io/reference/siren:F17479,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03317479,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"fish fillet (deep-frozen, unprocessed)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HP_0025615,Abscess,,An abscess is a localized collection of purulent material surrounded by inflammation and granulation.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0025615,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abscess,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An abscess is a localized collection of purulent material surrounded by inflammation and granulation.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510224,food allergen labelling about sesame seeds and products thereof,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0224,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510224,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food allergen labelling about sesame seeds and products thereof,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_10244,Monkeypox virus,,,FALSE,,,,,,,mpox virus|mpox|monkey pox virus,,,,,,,,,,,,,,,,,,,Monkeypox virus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:10244,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Monkeypox virus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001656,latitude and longitude coordinate (ISO 6709),,A geographic coordinate entity composed of both latitude and longitude components.,FALSE,,,,,,,,,,,,,,A geographic coordinate entity composed of both latitude and longitude components.,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001656,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,latitude and longitude coordinate (ISO 6709),,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C90481,Unscheduled Death,Unscheduled Death,The cessation of life at an unplanned time.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Unscheduled Death,,,,NCIT:C90481,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Unscheduled Death,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The cessation of life at an unplanned time.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490333,waxed paper container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0333,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490333,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,waxed paper container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000587,piece of furniture,,"A piece of furniture is a movable object intended to support various human activities such as seating (e.g., chairs, stools and sofas) and sleeping (e.g., beds).",FALSE,,,,,,,,,,,,,,"The assumption is that furniture is manufactured, which is arguable. Further, according to Black's Law Dictionary (http://thelawdictionary.org/furniture/) many classes can be subclasses of 'piece of furntiure': ""This term includes that which furnishes, or with which anything is furnished or supplied; whatever must be supplied to a house, a room, or the like, to make it habitable, convenient, or agreeable; goods, vessels, utensils, and other appendages necessary or convenient for housekeeping; whatever is added to the interior of a house or apartment, for use or convenience. Bell v. Holding, 27 Ind. 173.The term “furniture” embraces everything about the house that has been usually enjoyed there, including plate, linen, china, and pictures. 1 Endicott v. Endicott, 41N. J. Eq. 96, 3 Atl. 157.The word “furniture” made use of in the disposition of the law. or in the conventions or acts of persons, comprehends only such furniture as is intended for use and ornament of apartments, but not libraries which happen to be there, nor plate. Civ.Code La. art. 477."" However, this would eventually be absurd and limit other groupings. Perhaps some sort of 'furnishing' BFO:function would be a better way to handle this.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01000587,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,piece of furniture,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A piece of furniture is a movable object intended to support various human activities such as seating (e.g., chairs, stools and sofas) and sleeping (e.g., beds).",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03460220,food parboiling process (grain),,Treated with moist heat to soften the grain and to transfer nutrients from the bran to the endosperm.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=H0220,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03460220,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food parboiling process (grain),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Treated with moist heat to soften the grain and to transfer nutrients from the bran to the endosperm.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100310,sampling location longitude,geographical location longitude,A data field which describes the longitude coordinates of the geographical location of sample collection.,FALSE,,,,,,,PCDS:geo_loc_longitude,,,,,,,"PCDS: Provide longitude coordinates if available. Do not use the centre of the city/region/province/state/country or the location of your agency as a proxy, as this implicates a real location and is misleading. Specify as degrees longitude in format 'd[dd.dddd] W|E'.",,,,,,,,,,,,,,PCDS: 77.11 W,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,geographical location longitude,sample collection location longitude,,,,GENEPIO:0100310,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,sampling location longitude,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the longitude coordinates of the geographical location of sample collection.,,PCDS: The longitude coordinates of the geographical location of sample collection.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100598,gene symbol,,A sequence data which is the short name of a gene typically derived from the gene name.,FALSE,,,,,,,,,,,,,,,,,,,,,http://edamontology.org/data_1026,,,,,gene symbol,,gyrA,,,ready for release,http://purl.obolibrary.org/obo/OBI_0002877,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100598,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,gene symbol,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-1107-9135,,,https://github.com/obi-ontology/obi/issues/1579,A sequence data which is the short name of a gene typically derived from the gene name.,,,,,,,,
http://purl.obolibrary.org/obo/OMIT_0011913,Plant Proteins,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OMIT:0011913,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/omit.owl,,,,,,,,,Plant Proteins,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0034873,bodily gas,portion of gas in anatomical space|gas in anatomical space,Any substance in the body or expelled from the body that is in a gaseous state.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:84580,,,,,,,,,,,,,,,,,,,,,,,,,portion of gas in anatomical space|gas in anatomical space,,,,UBERON:0034873,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,bodily gas,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any substance in the body or expelled from the body that is in a gaseous state.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C814,Ribosomal RNA,rRNA|Ribosomal RNA|RIBOSOMAL RNA,"An RNA molecule that does not contain protein-coding sequence information and constitutes the majority of the cellular RNA (~80%). This nucleic acid associates with multiple proteins to form ribosomes, which are the organelles that drive mRNA-directed protein synthesis.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,rRNA|Ribosomal RNA|RIBOSOMAL RNA,,,,NCIT:C814,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Ribosomal RNA,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An RNA molecule that does not contain protein-coding sequence information and constitutes the majority of the cellular RNA (~80%). This nucleic acid associates with multiple proteins to form ribosomes, which are the organelles that drive mRNA-directed protein synthesis.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470170,sun drying,,"Drying by exposure to the sun. Example: cereals, spices, vegetables.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0170,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470170,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,sun drying,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Drying by exposure to the sun. Example: cereals, spices, vegetables.",,,,,,,,
http://purl.obolibrary.org/obo/HP_0004469,Chronic bronchitis,,Chronic inflammation of the bronchi.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0008677|SNOMEDCT_US:63480004,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0004469,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Chronic bronchitis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Chronic inflammation of the bronchi.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0792,Kapu in India (SGDP),Kapu,A population made up of 2 samples from Kapu individuals recruited in India as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation South Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Kapu,,,,HANCESTRO:0792,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Kapu in India (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Kapu individuals recruited in India as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation South Asian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0799,Relli in India (SGDP),Relli,A population made up of 2 samples from Relli individuals recruited in India as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation South Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Relli,,,,HANCESTRO:0799,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Relli in India (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Relli individuals recruited in India as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation South Asian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0791,Kalash in Pakistan (SGDP),Kalash,A population made up of 2 samples from Kalash individuals recruited in Pakistan as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation South Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Kalash,,,,HANCESTRO:0791,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Kalash in Pakistan (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Kalash individuals recruited in Pakistan as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation South Asian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0794,Kusunda in Nepal (SGDP),Kusunda,A population made up of 2 samples from Kusunda individuals recruited in Nepal as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation South Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Kusunda,,,,HANCESTRO:0794,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Kusunda in Nepal (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Kusunda individuals recruited in Nepal as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation South Asian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0797,Pathan in Pakistan (SGDP),Pathan,A population made up of 2 samples from Pathan individuals recruited in Pakistan as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation South Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Pathan,,,,HANCESTRO:0797,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Pathan in Pakistan (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Pathan individuals recruited in Pakistan as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation South Asian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0798,Punjabi in Pakistan (SGDP),Punjabi,A population made up of 4 samples from Punjabi individuals recruited in Pakistan as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation South Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Punjabi,,,,HANCESTRO:0798,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Punjabi in Pakistan (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 4 samples from Punjabi individuals recruited in Pakistan as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation South Asian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0796,Makrani in Pakistan (SGDP),Makrani,A population made up of 2 samples from Makrani individuals recruited in Pakistan as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation South Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Makrani,,,,HANCESTRO:0796,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Makrani in Pakistan (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Makrani individuals recruited in Pakistan as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation South Asian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0795,Madiga in India (SGDP),Madiga,A population made up of 1 samples from Madiga individuals recruited in India as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation South Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Madiga,,,,HANCESTRO:0795,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Madiga in India (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 1 samples from Madiga individuals recruited in India as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation South Asian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0790,Irula in India (SGDP),Irula,A population made up of 2 samples from Irula individuals recruited in India as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation South Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Irula,,,,HANCESTRO:0790,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Irula in India (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Irula individuals recruited in India as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation South Asian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0793,Khonda Dora in India (SGDP),Khonda Dora,A population made up of 1 samples from Khonda Dora individuals recruited in India as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation South Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Khonda Dora,,,,HANCESTRO:0793,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Khonda Dora in India (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 1 samples from Khonda Dora individuals recruited in India as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation South Asian.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0003350,epithelium of mucosa,,A layer of epithelial cells on the surface of the mucosa.,FALSE,,,,,,,,,,,,,,lies on top of lamina propria,,,,,,,,,,,,,,,,,,BTO:0003752,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0003350,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,epithelium of mucosa,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A layer of epithelial cells on the surface of the mucosa.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01001243,forest ecosystem,,An ecosystem which is determined by communities of plants with a tree growth form and in which members of those communities form continuous or discontinuous regions of canopy cover.,FALSE,,,,,,,,,,,,,,"The definitions of forest can vary greatly, and different classes will be needed to support the major categories. Tree cover alone is not enough to distinguish between forests and plantations. The international definition proposed by the 2010 FAO Forestry Resource Assessment: ""land spanning more than 0.5 ha with trees higher than 5 metres and canopy cover of more than 10 percent, or trees able to reach these thresholds in situ . It does not include land that is predominantly under agricultural or urban land use."" - FAO.  2010. Global forest resources assessment 2010, Main report, FAO Forestry Paper 163. Rome.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01001243,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,forest ecosystem,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An ecosystem which is determined by communities of plants with a tree growth form and in which members of those communities form continuous or discontinuous regions of canopy cover.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001693,listeria serotype 1/2c,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001693,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,listeria serotype 1/2c,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100031,air filtration,,A filtration process which removes solid particulates from the air via an air filtration device.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100031,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,air filtration,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A filtration process which removes solid particulates from the air via an air filtration device.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001477,r2 fastq filename,r2_fastq_filename|r2 fastq filename,A data field which describes the user-specified filename of the read 2 (r2) FASTQ file.,FALSE,,,,,,,PCDS:r2_fastq_filename,,,,,,,PCDS: Provide the r2 FASTQ filename.,,,,,,,,,,,,,,PCDS: ABC123_S1_L001_R2_001.fastq.gz,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,r2_fastq_filename|r2 fastq filename,r2 fastq filename slot,,,,GENEPIO:0001477,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,r2 fastq filename,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the user-specified filename of the read 2 (r2) FASTQ file.,,PCDS: The user-specified filename of the r2 FASTQ file.,,,,,,
http://purl.obolibrary.org/obo/IDO_0000513,infectious agent population,,An organism population whose members each have an infectious disposition.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,IDO:0000513,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ido.owl,,,,,,,,,infectious agent population,,,,,,,,,,,,,,,,,,,,,,,,,,,,Lindsay Cowell|Alexander Diehl|Albert Goldfain,,,,An organism population whose members each have an infectious disposition.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0003011,Abnormality of the musculature,Muscular abnormality,"Abnormality originating in one or more muscles, i.e., of the set of muscles of body.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4021745,,,,,,,,,,,,,,,,,,,,,,,HP:0040290|HP:0003708|HP:0003197,,Muscular abnormality,,,,HP:0003011,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormality of the musculature,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Abnormality originating in one or more muscles, i.e., of the set of muscles of body.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03460780,fluoride added claim,,A claim that fluoride has been added to an edible product.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=H0780,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03460780,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,fluoride added claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A claim that fluoride has been added to an edible product.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0002048,Illumina HiSeq 3000,,"A DNA sequencer manufactured by Illumina corporation, with a single flow cell and a throughput of more than 200 Gb per day.",FALSE,,,,,,,HiSeq 3000,,,,,,,,,,,,,,http://www.illumina.com/systems/hiseq-3000-4000.html,,,,,Illumina HiSeq 3000,,,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0002048,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Illumina HiSeq 3000,,,,,,,,,,,,,,,,,,,,,,,,,,,,"PERSON: Sagar Jain, Richard Scheuermann",,,,"A DNA sequencer manufactured by Illumina corporation, with a single flow cell and a throughput of more than 200 Gb per day.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100862,midnight-ont-v3 strategy,,An amplicon strategy which targets SARS-CoV-2 and was developed by Oxford Nanopore Technologies with the attributes of version 2.0.0 which produces amplicons approximately 1200bp in length.,FALSE,,,,,,,midnight-ont-v3|midnight ont v3,,,,,,,,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100862,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2026-04-13T19:52:38.515Z,,,,,,,,,,,,,,,,,,,midnight-ont-v3 strategy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An amplicon strategy which targets SARS-CoV-2 and was developed by Oxford Nanopore Technologies with the attributes of version 2.0.0 which produces amplicons approximately 1200bp in length.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_9421,tazobactam,,"A member of the class of penicillanic acids that is sulbactam in which one of the exocyclic methyl hydrogens is replaced by a 1,2,3-triazol-1-yl group; used (in the form of its sodium salt) in combination with ceftolozane sulfate for treatment of complicated intra-abdominal infections and complicated urinary tract infections.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:45973,,,,,,CHEBI:9421,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,tazobactam,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A member of the class of penicillanic acids that is sulbactam in which one of the exocyclic methyl hydrogens is replaced by a 1,2,3-triazol-1-yl group; used (in the form of its sodium salt) in combination with ceftolozane sulfate for treatment of complicated intra-abdominal infections and complicated urinary tract infections.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_9331,sulfamethizole,,"A sulfonamide consisting of a 1,3,4-thiadiazole nucleus with a methyl substituent at C-5 and a 4-aminobenzenesulfonamido group at C-2.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:9331,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,sulfamethizole,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A sulfonamide consisting of a 1,3,4-thiadiazole nucleus with a methyl substituent at C-5 and a 4-aminobenzenesulfonamido group at C-2.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_9332,sulfamethoxazole,,"An isoxazole (1,2-oxazole) compound having a methyl substituent at the 5-position and a 4-aminobenzenesulfonamido group at the 3-position.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:102247,,,,,,CHEBI:9332,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,sulfamethoxazole,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An isoxazole (1,2-oxazole) compound having a methyl substituent at the 5-position and a 4-aminobenzenesulfonamido group at the 3-position.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510090,no or reduced sugar claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0090,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510090,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,no or reduced sugar claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490413,cotton container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0413,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490413,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,cotton container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00004338,animal retail cut,,"An animal meat cut that is derived from a sub-primal, individual muscle cut or minor primal cut.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00004338,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,animal retail cut,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An animal meat cut that is derived from a sub-primal, individual muscle cut or minor primal cut.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100951,automatic flow-proportional composite sampling device,,"A composite sampler that collects multiple samples at intervals proportional to the flow rate of the sampled medium, producing a composite sample representative of flow-weighted conditions.",FALSE,,,,,,,automatic flow-proportional sampler,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100951,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-11-20T16:24:25Z,,,,,,,,,,,,,,,,,,,automatic flow-proportional composite sampling device,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A composite sampler that collects multiple samples at intervals proportional to the flow rate of the sampled medium, producing a composite sample representative of flow-weighted conditions.",,,,,,,,
http://purl.obolibrary.org/obo/PATO_0000001,quality,,A dependent entity that inheres in a bearer by virtue of how the bearer is related to other entities,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PATO:0000072,,,,,,PATO:0000001,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl|http://purl.obolibrary.org/obo/pco.owl|http://purl.obolibrary.org/obo/pato.owl|http://purl.obolibrary.org/obo/mondo.owl|http://purl.obolibrary.org/obo/foodon.owl|http://purl.obolibrary.org/obo/envo.owl|http://purl.obolibrary.org/obo/apollo_sv.owl,,,,,,,,,quality,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A dependent entity that inheres in a bearer by virtue of how the bearer is related to other entities,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000188,beef plate short rib (raw),,A raw beef plate short rib.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000188,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef plate short rib (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef plate short rib.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00005749,farm soil,,A portion of soil which is part of a cropland or a rangeland biome.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00005749,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,farm soil,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A portion of soil which is part of a cropland or a rangeland biome.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00004328,organism piece,,A piece or pieces or amount of substance derived from one or more organisms.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00004328,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,organism piece,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A piece or pieces or amount of substance derived from one or more organisms.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0002453,ethmoid sinus,ethmoidal sinus|ethmoidal bone sinus,"The evaginations of the mucous membrane of the nasal cavity into the ethmoidal bony labyrinth, forming multiple small paranasal sinuses.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Ethmoid_bone_sinus|UMLS:C0015028|SCTID:181206009|NCIT:C12276|MESH:D005005|MA:0001792|GAID:356|FMA:84115,,,,,,,,,,,,,,,,,,,,,,,,,ethmoidal sinus|ethmoidal bone sinus,,,,UBERON:0002453,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,ethmoid sinus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The evaginations of the mucous membrane of the nasal cavity into the ethmoidal bony labyrinth, forming multiple small paranasal sinuses.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_29688,telithromycin,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:46029,,,,,,CHEBI:29688,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,telithromycin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490144,laminate bag or pouch,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0144,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490144,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,laminate bag or pouch,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HP_0011354,Generalized abnormality of skin,Generalized abnormality of skin|Generalised abnormality of skin,An abnormality of the skin that is not localized to any one particular region.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4021157,,,,,,,,,,,,,,,,,,,,,,,,,Generalized abnormality of skin|Generalised abnormality of skin,,,,HP:0011354,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Generalized abnormality of skin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An abnormality of the skin that is not localized to any one particular region.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002157,subject age at time of specimen collection specification,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002157,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,subject age at time of specimen collection specification,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0001775,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01001785,land,,A surface layer of an astronomical body which is primarily composed of solid material and is not covered by oceans or other bodies of water.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01001785,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,land,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A surface layer of an astronomical body which is primarily composed of solid material and is not covered by oceans or other bodies of water.,,,,,,,,
http://www.ebi.ac.uk/efo/EFO_0000719,temporal measurement,,"A temporal entity is an entity that has temporal parts and that happens, unfolds or develops through time. An occurrent is something which exists over time, rather than existing completely at many times",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,efo:EFO_0000719,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,temporal measurement,,,,,,,,,,,,,,,,,,,,,,,,,,,,James Malone,,,,"A temporal entity is an entity that has temporal parts and that happens, unfolds or develops through time. An occurrent is something which exists over time, rather than existing completely at many times",,,,,,,,
http://purl.obolibrary.org/obo/HP_0030829,Abnormal breath sound,Abnormal lung auscultation finding,An anomalous (adventitious) sound produced by the breathing process.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0231856|SNOMEDCT_US:301273002,,,,,,,,,,,,,,,,,,,,,,,,,Abnormal lung auscultation finding,,,,HP:0030829,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal breath sound,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An anomalous (adventitious) sound produced by the breathing process.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0003840,hindlimb joint,lower extremity limb joint|lower extremity joint of limb|limb joint of lower extremity|limb joint of inferior member|limb joint of hindlimb|limb joint of hind limb|joint of lower limb|joint of limb of lower extremity|joint of limb of inferior member|joint of limb of hindlimb|joint of limb of hind limb|joint of free lower limb|inferior member limb joint|inferior member joint of limb|hindlimb limb joint|hindlimb joint of limb|hind limb limb joint|hind limb joint of limb,A limb joint that is part of a hindlimb [Automatically generated definition].,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SCTID:304573000|MA:0000662|EMAPA:32635,,,,,,,,,,,,,,,,,,,,,,,,,lower extremity limb joint|lower extremity joint of limb|limb joint of lower extremity|limb joint of inferior member|limb joint of hindlimb|limb joint of hind limb|joint of lower limb|joint of limb of lower extremity|joint of limb of inferior member|joint of limb of hindlimb|joint of limb of hind limb|joint of free lower limb|inferior member limb joint|inferior member joint of limb|hindlimb limb joint|hindlimb joint of limb|hind limb limb joint|hind limb joint of limb,,,,UBERON:0003840,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,hindlimb joint,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A limb joint that is part of a hindlimb [Automatically generated definition].,,,,,,,,
http://www.ebi.ac.uk/efo/EFO_0001799,EFO_0001799,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/NCBITaxon_9606,,,,,,,,,,,,,,,,,,,,,efo:EFO_0001799,,,,"A social group characterized by a distinctive social and cultural tradition maintained from generation to generation, a common history and origin and a sense of identification with the group; members of the group have distinctive features in their way of life, shared experiences and often a common genetic heritage; these features may be reflected in their experience of health and disease. (NCI); Ethnicity - an arbitrary classification of the social group a person belongs to, and either identifies with or is identified with by others, as a result of a complex of cultural, biological, geographical and other factors such as linguistic, dietary and religion traditions; ancestry, background, allegiance, or association; and physical characteristics traditionally associated with race. Increasingly the concept is used synonymously with race but this use trend has a pragmatic basis rather than scientific. (NCI); The concept of ethnic origin is an attempt to classify people, not according to their current ethnicity, but according to where their ancestors came from. Ethnic origin has become a popular classification in statistics, where the concept of race has been largely discarded. (from Wikipedia) (NCI); a group of people with a common cultural heritage that sets them apart from others in a variety of social relationships. (CSP)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0012474,hepatic cecum,hepatic caecum,A ventral evagination extending anteriorly in the mid-portion of the intestine in Amphioxi.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,BTO:0002855,,,,,,,,,,,,,,,,,,,,,,,,,hepatic caecum,,,,UBERON:0012474,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,hepatic cecum,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A ventral evagination extending anteriorly in the mid-portion of the intestine in Amphioxi.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03450044,rotisserie roasting,,Rotisserie is a style of roasting where meat is skewered on a spit and revolves over a flame or other heat source.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=G0044,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03450044,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,rotisserie roasting,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Rotisserie is a style of roasting where meat is skewered on a spit and revolves over a flame or other heat source.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001471,hospitalization event record,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001471,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,hospitalization event record,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_33692,hydrides,,Hydrides are chemical compounds of hydrogen with other chemical elements.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:33692,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,hydrides,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Hydrides are chemical compounds of hydrogen with other chemical elements.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102182,monitoring strategy,,"A sampling strategy in which environments are sampled to assess a known event, hazard, or signal over time. Monitoring is typically targeted and focused, such as tracking levels of a specific contaminant or pathogen after it has already been detected",FALSE,,,,,,,Monitoring,,,,,,,,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102182,,,,,,,,,,,,,https://orcid.org/0000-0001-8008-8249,2026-04-13T19:52:38.515Z,,,,,,,,,,,,,,,,,,,monitoring strategy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A sampling strategy in which environments are sampled to assess a known event, hazard, or signal over time. Monitoring is typically targeted and focused, such as tracking levels of a specific contaminant or pathogen after it has already been detected",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001568,assembly quality control datum,,"A single datum having to do with a metric for genomic sequence assembly quality control.  

A ""quality control measurement"" can be defined as a measurement that has some norm within a definable context, e.g. for a certain subspecies.  It may be a calculated quantity.

A ""quality control metric"" is an upper or lower bound threshold that a measurement is compared to.  Surpassing the threshold may indicate an error situation.

A ""measure"" can indicate an amount of activity, consumption, transformation, etc. but doesn't itself convey an over-stepping of bounds in the way that a metric does.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001568,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,http://purl.obolibrary.org/obo/SO_0000353,,,,,,assembly quality control datum,,,,,Assembly QC,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"A single datum having to do with a metric for genomic sequence assembly quality control.  

A ""quality control measurement"" can be defined as a measurement that has some norm within a definable context, e.g. for a certain subspecies.  It may be a calculated quantity.

A ""quality control metric"" is an upper or lower bound threshold that a measurement is compared to.  Surpassing the threshold may indicate an error situation.

A ""measure"" can indicate an amount of activity, consumption, transformation, etc. but doesn't itself convey an over-stepping of bounds in the way that a metric does.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_204928,cefotaxime,,"A cephalosporin compound having acetoxymethyl and [2-(2-amino-1,3-thiazol-4-yl)-2-(methoxyimino)acetyl]amino side groups.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:41475|CHEBI:3497|CHEBI:112504,,,,,,CHEBI:204928,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,cefotaxime,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A cephalosporin compound having acetoxymethyl and [2-(2-amino-1,3-thiazol-4-yl)-2-(methoxyimino)acetyl]amino side groups.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002012,TB lineage 1 - Indo-Oceanic,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002012,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,TB lineage 1 - Indo-Oceanic,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03450022,steaming with pressure,,Cooked in a pressure cooker.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=G0022,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03450022,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,steaming with pressure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Cooked in a pressure cooker.,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000412,Bantu Western,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000412,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Bantu Western,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000418,Efik,,A Western African population with a population size of 0.9 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000418,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Efik,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Western African population with a population size of 0.9 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000416,Dogon,,A Western African population with a population size of 1.591 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000416,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Dogon,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Western African population with a population size of 1.591 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000415,Buduma,,A Western African population with a population size of 0.128 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000415,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Buduma,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Western African population with a population size of 0.128 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000413,Biafada,,A Western African population with a population size of 0.04,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000413,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Biafada,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Western African population with a population size of 0.04,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000419,Eket,Ekid,A Western African population with a population size of 0.3 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Ekid,,,,AfPO:0000419,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Eket,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Western African population with a population size of 0.3 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000417,Edo,,A Western African population with a population size of 1.6 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000417,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Edo,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Western African population with a population size of 1.6 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000410,Adele,,A Western African population with a population size of 0.05 million,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000410,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Adele,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Western African population with a population size of 0.05 million,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000411,Aku,,A Western African population with a population size of 0.01 million,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000411,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Aku,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Western African population with a population size of 0.01 million,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000414,Bubi,,A Western African population with a population size of 0.1 million,FALSE,,,,,,,,,,,,,,"The Bubi are an amalgamation of first nation clans with various ancient mainland origins that later integrated with Krio, Efik, Igbo, Emancipado and Fernandino settlers.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000414,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Bubi,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Western African population with a population size of 0.1 million,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03450024,cooking with fat or oil,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=G0024,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03450024,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,cooking with fat or oil,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03411261,fungus,,"A member of the group of eukaryotic organisms in the kingdom Fungi that includes unicellular microorganisms such as yeasts and molds, as well as multicellular fungi that produce familiar fruiting forms known as mushrooms.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=B1261,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03411261,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,fungus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A member of the group of eukaryotic organisms in the kingdom Fungi that includes unicellular microorganisms such as yeasts and molds, as well as multicellular fungi that produce familiar fruiting forms known as mushrooms.",,,,,,,,
http://purl.obolibrary.org/obo/UO_1000008,meter based unit,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:1000008,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,meter based unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510211,high {name of vitamin/s} and/or {name of mineral/s} nutrition claim,,"A claim that a food is high in vitamins and/or minerals, and any claim likely to have the same meaning for the consumer, may only be made where the product contains at least twice the value of ""source of [NAME OF VITAMIN/S] and/or [NAME OF MINERAL/S]"" [REGULATION (EC) No 1924/2006 Corrigendum 2007-01-18].",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0211,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510211,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,high {name of vitamin/s} and/or {name of mineral/s} nutrition claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A claim that a food is high in vitamins and/or minerals, and any claim likely to have the same meaning for the consumer, may only be made where the product contains at least twice the value of ""source of [NAME OF VITAMIN/S] and/or [NAME OF MINERAL/S]"" [REGULATION (EC) No 1924/2006 Corrigendum 2007-01-18].",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_80016,Chalcomycin,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:80016,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,Chalcomycin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001516,contributor acknowledgement field category,PCDS:lineage and variant information,A data field category which refers to contributor acknowledgement information fields.,FALSE,,,,,,,PCDS:contributor_acknowledgement_slot_group,,,,,,,,,,,,,,,,,,,,,,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,PCDS:lineage and variant information,lineage and variant information slot category,,,,GENEPIO:0001516,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,contributor acknowledgement field category,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field category which refers to contributor acknowledgement information fields.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020062,piece of avian animal meat,,A piece of meat that is derived from an avian animal.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020062,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of avian animal meat,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A piece of meat that is derived from an avian animal.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002037,obsolete: antimicrobial resistance phenotype,,"The resistance phenotype of an isolate represents the interpretation of an MIC value with regard to some breakpoint threshold e.g. resistant (R), sensitive (S), intermediate (I), wild type (WT), or non-wild type (NWT)",TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002037,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: antimicrobial resistance phenotype,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,http://purl.obolibrary.org/obo/NCIT_C85539,,,"The resistance phenotype of an isolate represents the interpretation of an MIC value with regard to some breakpoint threshold e.g. resistant (R), sensitive (S), intermediate (I), wild type (WT), or non-wild type (NWT)",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_17698,chloramphenicol,,"An organochlorine compound that is dichloro-substituted acetamide containing a nitrobenzene ring, an amide bond and two alcohol functions.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:47327|CHEBI:3603|CHEBI:23108|CHEBI:23106|CHEBI:13965,,,,,,CHEBI:17698,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,chloramphenicol,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An organochlorine compound that is dichloro-substituted acetamide containing a nitrobenzene ring, an amide bond and two alcohol functions.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001246,environmental specimen,environmental,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI Biosample: environmental (swab or sampling),,,,,,,,,,,,,,,,,,,,,,,,environmental,,,,,GENEPIO:0001246,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,environmental specimen,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_51069,organic halide salt,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:51069,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,organic halide salt,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_35573,organic mancude parent,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:35573,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,organic mancude parent,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03480027,vacuum-packed,,Packed in a container under high vacuum (26-29 in.).,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=K0027,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03480027,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,vacuum-packed,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Packed in a container under high vacuum (26-29 in.).,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000140,"beef tenderloin (boneless, raw)",,A raw and boneless beef tenderloin.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000140,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"beef tenderloin (boneless, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw and boneless beef tenderloin.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000238,beef rib finger (raw),,A raw beef rib finger cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000238,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef rib finger (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef rib finger cut.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_38104,oxacycle,,Any organic heterocyclic compound containing at least one ring oxygen atom.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:38104,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,oxacycle,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any organic heterocyclic compound containing at least one ring oxygen atom.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001955,PCR method,,Source material was selected by designed primers.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI SRA: PCR,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001955,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PCR method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Source material was selected by designed primers.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100660,PHA4GE quality control specification,Public Health Alliance for Genomic Epidemiology quality control specification|PHA4GE QC specification,A data specification established by the Public Health Alliance for Genomic Epidemiology (PHA4GE) for genomics contextual data (metadata) harmonization and curation.,FALSE,,,,,,,PHA4GE quality control contextual data tags specification|PHA4GE QC tags specification|PHA4GE QC contextual data tags specification,,,,,,,,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,Public Health Alliance for Genomic Epidemiology quality control specification|PHA4GE QC specification,,,,GENEPIO:0100660,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-1107-9135,2023-01-22T23:12:40.795Z,,,,,,,,,,,,,,,,,,,PHA4GE quality control specification,,,,,,,,,,,,,,,,,,,,,,GitHub: https://github.com/pha4ge/contextual_data_QC_tags,,,,,,,,,,A data specification established by the Public Health Alliance for Genomic Epidemiology (PHA4GE) for genomics contextual data (metadata) harmonization and curation.,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000212,Shaigiya,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000212,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Shaigiya,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000215,Halfawieen,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000215,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Halfawieen,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000216,Nuba,,"'The Nuba trace their geographical roots to the area around the Nuba mountains, the uppermost regions around the Ingessana hills and communities close to the Red Sea.' taken from: Culture and Customs of Sudan. Written by De Kwame Essien, Toyin Falola Ph.D.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000216,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Nuba,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"'The Nuba trace their geographical roots to the area around the Nuba mountains, the uppermost regions around the Ingessana hills and communities close to the Red Sea.' taken from: Culture and Customs of Sudan. Written by De Kwame Essien, Toyin Falola Ph.D.",,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000213,Messiria,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000213,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Messiria,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000214,Hadendoa,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000214,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Hadendoa,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000211,Gaaliin,,A Eastern African population with a population size of 4 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000211,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Gaaliin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Eastern African population with a population size of 4 millions,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001790,specimen datum,,This is a catch-all category for listing specimen related terms,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001790,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/OBI_0100051,,,,,,specimen datum,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/OBI_0001616|http://purl.obolibrary.org/obo/OBI_0100051|http://purl.obolibrary.org/obo/OBI_0002814|http://purl.obolibrary.org/obo/OBI_0001903|http://purl.obolibrary.org/obo/OBI_0001889|http://purl.obolibrary.org/obo/OBI_0001884|http://purl.obolibrary.org/obo/OBI_0000659|http://purl.obolibrary.org/obo/GENEPIO_0001724|http://purl.obolibrary.org/obo/GENEPIO_0001429|http://purl.obolibrary.org/obo/GENEPIO_0001196|http://purl.obolibrary.org/obo/GENEPIO_0002105,,,,,,Damion Dooley,,,,This is a catch-all category for listing specimen related terms,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100762,sample collection data steward name,sample collection data steward name,"A data field which describes the name of the individual responsible for the data governance, (meta)data usage and distribution of the sample.",FALSE,,,,,,,PCDS:sample_collection_data_steward_name,,,,,,,PCDS: Provide the name of the sample collection data steward.,,,,,,,,,,,,,,PCDS: Joe Bloggs,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,sample collection data steward name,sample collection data steward name slot,,,,GENEPIO:0100762,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-21T01:14:47.111Z,,,,,,,,,,,,,,,,,,,sample collection data steward name,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://github.com/cidgoh/pathogen-genomics-package/issues/39,"A data field which describes the name of the individual responsible for the data governance, (meta)data usage and distribution of the sample.",,"PCDS: The name of the individual responsible for the data governance, (meta)data usage and distribution of the sample.",,,,,,
http://purl.obolibrary.org/obo/UBERON_0038952,subpyloric lymph node,subpyloric node|no. 6 station pyloric lymph node|jPS no. 6 node|jPS 6 node|infrapyloric node|infrapyloric lymph node,Pylorioc lymph node located in the angle between the superior and descending parts of duodenum.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:66184,,,,,,,,,,,,,,,,,,,,,,,,,subpyloric node|no. 6 station pyloric lymph node|jPS no. 6 node|jPS 6 node|infrapyloric node|infrapyloric lymph node,,,,UBERON:0038952,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,subpyloric lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Pylorioc lymph node located in the angle between the superior and descending parts of duodenum.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038951,suprapyloric lymph node,suprapyloric node|nodus suprapyloricus|nodus lymphoideus suprapyloricus|no. 5 station pyloric lymph node|jPS no.5 node|jPS 5 node,Pylorioc lymph node located near the bifurcation of gastroduodenal artery and superior to the pylorus.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:66183,,,,,,,,,,,,,,,,,,,,,,,,,suprapyloric node|nodus suprapyloricus|nodus lymphoideus suprapyloricus|no. 5 station pyloric lymph node|jPS no.5 node|jPS 5 node,,,,UBERON:0038951,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,suprapyloric lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Pylorioc lymph node located near the bifurcation of gastroduodenal artery and superior to the pylorus.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038953,retropyloric lymph node,retropyloric node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:66185,,,,,,,,,,,,,,,,,,,,,,,,,retropyloric node,,,,UBERON:0038953,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,retropyloric lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0007179,autoimmune disease,"disease, autoimmune|autoimmune disorder|autoimmune disease or disorder|autoimmune disease","A disorder resulting from loss of function or tissue destruction of an organ or multiple organs, arising from humoral or cellular immune responses of the individual to their own tissue constituents. It may be systemic (e.g., systemic lupus erythematosus), or organ specific, (e.g., thyroiditis).",FALSE,,,,,,,,,,,,,,Editor note: check OMIM,,,,,,,,,,,,,,,,,,UMLS:C0004364|SCTID:85828009|OMIM:109100|OBI:1110054|NCIT:C2889|MESH:D001327|MEDGEN:2135|ICD9:720|ICD9:279.49|ICD9:279.4|EFO:0005809|DOID:417,,,,,,,,,,,,,,,,,,,,,,,,,"disease, autoimmune|autoimmune disorder|autoimmune disease or disorder|autoimmune disease",,,,MONDO:0007179,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar|http://purl.oboInOwllibrary.org/oboInOwl/mondo#clingen,,,,,,,,autoimmune disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A disorder resulting from loss of function or tissue destruction of an organ or multiple organs, arising from humoral or cellular immune responses of the individual to their own tissue constituents. It may be systemic (e.g., systemic lupus erythematosus), or organ specific, (e.g., thyroiditis).",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490356,laminate paper coextruded with plastic,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0356,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490356,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,laminate paper coextruded with plastic,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001456,amplicon pcr primer scheme,amplicon pcr primer scheme,"A data field which describes the specifications of the primers (primer sequences, binding positions, fragment size generated, etc.) used to generate the amplicons to be sequenced.",FALSE,,,,,,,PCDS:amplicon_pcr_primer_scheme,,,,,,,PCDS: Provide the name and version of the primer scheme used to generate the amplicons for sequencing.,,,,,,,,,,,,,,PCDS: artic v3,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,amplicon pcr primer scheme,amplicon polymerase chain reaction primer scheme slot|amplicon polymerase chain reaction primer scheme field|amplicon pcr primer scheme slot,,,,GENEPIO:0001456,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,amplicon pcr primer scheme,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A data field which describes the specifications of the primers (primer sequences, binding positions, fragment size generated, etc.) used to generate the amplicons to be sequenced.",,"PCDS: The specifications of the primers (primer sequences, binding positions, fragment size generated etc) used to generate the amplicons to be sequenced.",,,,,,
http://purl.obolibrary.org/obo/NCIT_C116340,Brain Death,Brain death|Brain Death,Irreversible absence of cortical and brain stem functioning.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Brain death|Brain Death,,,,NCIT:C116340,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Brain Death,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Irreversible absence of cortical and brain stem functioning.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C97634,Healthcare Practitioners and Technical Occupations,Specialist/Technologist|Healthcare Practitioners and Technical Occupations,A class of professional or vocational positions of employment that involve healthcare practice or technical operations.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Specialist/Technologist|Healthcare Practitioners and Technical Occupations,,,,NCIT:C97634,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Healthcare Practitioners and Technical Occupations,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A class of professional or vocational positions of employment that involve healthcare practice or technical operations.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0002573,Hematochezia,Rectal bleeding,"The passage of fresh (red) blood per anus, usually in or with stools. Most rectal bleeding comes from the colon, rectum, or anus.",FALSE,,,,,,,,,,,,,,"Bright red blood in stool, most frequentoly caused by hemorrhoids or diverticulosis.",,,,,,,,,,,,,,,,,,UMLS:C0018932|SNOMEDCT_US:405729008|SNOMEDCT_US:236068001,,,,,,,,,,,,,,,,,,,,,,,HP:0002609|HP:0002255,,Rectal bleeding,,,,HP:0002573,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Hematochezia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The passage of fresh (red) blood per anus, usually in or with stools. Most rectal bleeding comes from the colon, rectum, or anus.",,,,,,,,
http://purl.obolibrary.org/obo/HP_0002572,Episodic vomiting,Episodic vomiting,"Paroxysmal, recurrent episodes of vomiting.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C1857202|UMLS:C1838993,,,,,,,,,,,,,,,,,,,,,,,,,Episodic vomiting,,,,HP:0002572,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Episodic vomiting,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Paroxysmal, recurrent episodes of vomiting.",,,,,,,,
http://purl.obolibrary.org/obo/HP_0002574,Episodic abdominal pain,,An intermittent form of abdominal pain.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C3808022|UMLS:C0262527,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0002574,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Episodic abdominal pain,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An intermittent form of abdominal pain.,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0016218,Guillain-Barre syndrome,postinfectious polyneuritis|post-infective polyneuritis|post-infectious polyneuritis,"A spectrum of rare post-infectious neuropathies that usually occur in otherwise healthy patients. GBS is clinically heterogeneous and encompasses acute inflammatory demyelinating polyradiculoneuropathy (AIDP), acute motor axonal neuropathy (AMAN) and acute motor-sensory axonal neuropathy (AMSAN), Miller-Fisher syndrome (MFS) and some other regional variants.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0018378|SCTID:40956001|Orphanet:2103|NCIT:C116345|MedDRA:10018767|MESH:D020275|MEDGEN:5399|ICD10CM:G61.0|GARD:0006554|EFO:0007292|DOID:12842,,,,,,,,,,,,,,,,,,,,,,,,,Guillain-Barré-Strohl syndrome|Guillain-Barré syndrome|Guillain-Barre-Strohl syndrome|Guillain Barré syndrome|Guillain Barre syndrome|GBS,postinfectious polyneuritis|post-infective polyneuritis|post-infectious polyneuritis,,,MONDO:0016218,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#rare|http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar|http://purl.oboInOwllibrary.org/oboInOwl/mondo#ordo_group_of_disorders|http://purl.oboInOwllibrary.org/oboInOwl/mondo#nord_rare|http://purl.oboInOwllibrary.org/oboInOwl/mondo#gard_rare|http://purl.oboInOwllibrary.org/oboInOwl/mondo#doid_rare|http://purl.oboInOwllibrary.org/oboInOwl/mondo#disease_grouping,,,,,,,,Guillain-Barre syndrome,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A spectrum of rare post-infectious neuropathies that usually occur in otherwise healthy patients. GBS is clinically heterogeneous and encompasses acute inflammatory demyelinating polyradiculoneuropathy (AIDP), acute motor axonal neuropathy (AMAN) and acute motor-sensory axonal neuropathy (AMSAN), Miller-Fisher syndrome (MFS) and some other regional variants.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000073,sequencing application,,A lab sequencing datum which describes a pre-defined sequence of steps to run the automated sequencing pipeline.,FALSE,,,,,,,,,,,,,,,,,,,,,GROUP: IRIDA Ontology (Emma),,,,,,,"amplicon sequencing, WGS",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000073,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,,,,,,,sequencing application,,,,,Sequencing,,,,,,,,,,,,,,,,,,,,,,Application,,,Derived from Illumina Sample Sheet,,A lab sequencing datum which describes a pre-defined sequence of steps to run the automated sequencing pipeline.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490166,plastic bag or pouch,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0166,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490166,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,plastic bag or pouch,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_46952,oxazinane,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:46952,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,oxazinane,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/IDO_0000636,sepsis,,A process that is a systemic inflammatory response to infection.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,IDO:0000636,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ido.owl,,,,,,,,,sepsis,,,,,,,,,,,,,,,,,,,,,,,,,,,,Lindsay Cowell|Alexander Diehl|Albert Goldfain,,,,A process that is a systemic inflammatory response to infection.,,,,,,,,
http://purl.obolibrary.org/obo/HSO_0000072,sampling strategy,,A directive information that describes how population units will be chosen for sample/data collection in a surveillance activity.,FALSE,,,,,,,,,,,,,,"Describe how units have been planned to be sampled
Sampling at the primary sampling unit (PSU) level
Describe the information used to calculate sample size at the PSU level, e.g. the number of PSU in the population (see section 6 also), (between−herd) design prevalence, desired confidence, desired power, sensitivity, specificity.
If recommended parameters from international standards are used, indicate the source of such standards (e.g. OIE)
Sampling at the secondary sampling unit (SSU) level
Describe the information used to calculate sample size at the SSU level, e.g. the number of SSU in the population (see section 6 also), (within−herd) design prevalence, desired confidence, desired power, sensitivity, specificity.",,,,,,,https://www.fp7-risksur.eu/terminology/glossary|https://github.com/SVA-SE/AHSURED/wiki/Description-of-surveillance-items-in-the-checklist,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HSO:0000072,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hso.owl,,,,,,,,,sampling strategy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A directive information that describes how population units will be chosen for sample/data collection in a surveillance activity.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100637,exposure field,exposure slot,A data field which describes the exposure information of a host organism.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,(2026-02-28) Under review for deprecation.,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,exposure slot,,,,GENEPIO:0100637,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788,2023-01-01T03:32:48.197Z,,,,,,,,,,,,,,,,,,,exposure field,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the exposure information of a host organism.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C71395,Step Relative,Step Relative|Step Relation,A family relation established through a subsequent marriage of your parent.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Step Relative|Step Relation,,,,NCIT:C71395,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Step Relative,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A family relation established through a subsequent marriage of your parent.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_1003,pelvic inflammatory disease,,A female reproductive system disease that is characterized by an infection of the female reproductive organs.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:1003,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,pelvic inflammatory disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A female reproductive system disease that is characterized by an infection of the female reproductive organs.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_10035,asymptomatic neurosyphilis,,A tertiary neurosyphilis that results_in mild meningitis.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:10035,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,asymptomatic neurosyphilis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A tertiary neurosyphilis that results_in mild meningitis.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_10039,late congenital syphilis,,"A congenital syphilis that occurs in children at or greater than two years of age who acquired the infection trans-placentally. The infection has_symptom gummatous ulcers, has_symptom periosteal lesions, has_symptom paresis, has_symptom tabes, has_symptom optic atrophy, has_symptom interstitial keratitis, has_symptom sensorineural deafness, and has_symptom dental deformities.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:10039,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,late congenital syphilis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A congenital syphilis that occurs in children at or greater than two years of age who acquired the infection trans-placentally. The infection has_symptom gummatous ulcers, has_symptom periosteal lesions, has_symptom paresis, has_symptom tabes, has_symptom optic atrophy, has_symptom interstitial keratitis, has_symptom sensorineural deafness, and has_symptom dental deformities.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_24951,kanamycins,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:24951,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,kanamycins,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_399,tuberculosis,,"A primary bacterial infectious disease that is located_in lungs, located_in lymph nodes, located_in pericardium, located_in brain, located_in pleura or located_in gastrointestinal tract, has_material_basis_in Mycobacterium tuberculosis, which is transmitted_by droplets released into the air when an infected person coughs or sneezes.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:399,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,tuberculosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A primary bacterial infectious disease that is located_in lungs, located_in lymph nodes, located_in pericardium, located_in brain, located_in pleura or located_in gastrointestinal tract, has_material_basis_in Mycobacterium tuberculosis, which is transmitted_by droplets released into the air when an infected person coughs or sneezes.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02010211,piece of light animal meat (with skin),,A piece of light animal meat that contains skin.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02010211,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of light animal meat (with skin),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A piece of light animal meat that contains skin.,,,,,,,,
http://www.ebi.ac.uk/efo/EFO_0000433,duration,,A temporal measurement of the time between two specified points.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SNOMEDCT:103335007|NIFSTD:birnlex_2052|NCIt:C25330,,,,,,,,,,,,,,,,,,,,,,,,,,,,,efo:EFO_0000433,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,duration,,,,,,,,,,,,,,,,,,,,,,,,,,,,Tomasz Adamusiak|James Malone,,,,A temporal measurement of the time between two specified points.,,,,,,,,
http://purl.obolibrary.org/obo/UO_1000244,base pair based unit,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:1000244,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,base pair based unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001270,animal exposure process,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001270,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,animal exposure process,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001019,obsolete: food kiosk,,A food kiosk is a kiosk (a booth with an open window on one side) that sells food.,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001019,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: food kiosk,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,http://purl.obolibrary.org/obo/ENVO_01000974,,,A food kiosk is a kiosk (a booth with an open window on one side) that sells food.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0460,South Sudanese,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0460,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,South Sudanese,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0467,French Polynesian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0467,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,French Polynesian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0466,Fijian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0466,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Fijian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0463,American,,Individuals who self-identify or are reported by authors as being citizens of the United States of America.,FALSE,,,,,,,,,,,,,,"This term should be used exclusively to refer to citizenship, without any inference of individuals' ethnic, linguistic, religious or other cultural background.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0463,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,American,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Individuals who self-identify or are reported by authors as being citizens of the United States of America.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0465,Cook Islander,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0465,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Cook Islander,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0468,Guamanian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0468,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Guamanian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0461,Syrian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0461,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Syrian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0469,I-Kiribati,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0469,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,I-Kiribati,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0464,American Samoan,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0464,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,American Samoan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0462,British,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0462,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,British,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102189,Cytochrome c oxidase I barcoding,,An amplicon sequencing assay that targets and sequences a standardized region of the mitochondrial cytochrome c oxidase subunit I (COI) gene to enable taxonomic identification of eukaryotic organisms based on DNA barcodes.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102189,,,,,,,,,,,,,,2026-04-13T19:52:38.515Z,,,,,,,,,,,,,,,,,,,Cytochrome c oxidase I barcoding,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An amplicon sequencing assay that targets and sequences a standardized region of the mitochondrial cytochrome c oxidase subunit I (COI) gene to enable taxonomic identification of eukaryotic organisms based on DNA barcodes.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_48947,clavulanic acid,,Antibiotic isolated from <em>Streptomyces clavuligerus</em>. It acts as a suicide inhibitor of bacterial β-lactamase enzymes.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:43442|CHEBI:3736,,,,,,CHEBI:48947,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,clavulanic acid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Antibiotic isolated from <em>Streptomyces clavuligerus</em>. It acts as a suicide inhibitor of bacterial β-lactamase enzymes.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0001062,anatomical entity,,Biological entity that is either an individual member of a biological species or constitutes the structural organization of an individual member of a biological species.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ZFA:0100000|XAO:0000000|WBbt:0000100|UMLS:C1515976|TGMA:0001822|TAO:0100000|NCIT:C12219|MA:0000001|HAO:0000000|FMA:62955|FBbt:10000000|EHDAA2:0002229|CARO:0000000|BIRNLEX:6|BILA:0000000|BFO:0000004|AEO:0000000|AAO:0010841,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0001062,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl|http://purl.obolibrary.org/obo/foodon.owl|http://purl.obolibrary.org/obo/cob.owl,,,,,,,,,anatomical entity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Biological entity that is either an individual member of a biological species or constitutes the structural organization of an individual member of a biological species.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C73706,Spatial Qualifier,Spatial Qualifier|Spatial,A term used to indicate an object's position in space or it's relationship in space to another object.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Spatial Qualifier|Spatial,,,,NCIT:C73706,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Spatial Qualifier,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A term used to indicate an object's position in space or it's relationship in space to another object.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490322,cellulose film,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0322,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490322,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,cellulose film,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001832,ANSI INCITS 38,,"Information Technology – Codes For The Identification Of The States And Equivalent Areas Within The United States, Puerto Rico, And The Insular Areas",FALSE,,,,,,,,,,,,,,,,,,,,,American National Standards Institute,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001832,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ANSI INCITS 38,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"Information Technology – Codes For The Identification Of The States And Equivalent Areas Within The United States, Puerto Rico, And The Insular Areas",,,,,,,,
http://purl.obolibrary.org/obo/HP_6000060,Aerophagia,,Repetitive air swallowing and belching and that may result in abdominal distention.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:6000060,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Aerophagia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Repetitive air swallowing and belching and that may result in abdominal distention.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00001508,Province (Greenland),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00001508,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Province (Greenland),http://purl.obolibrary.org/obo/GAZ_00001507,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C33904,Other Anatomic Concept,Other Anatomy Concept|Other Anatomic Concept,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Other Anatomy Concept|Other Anatomic Concept,,,,NCIT:C33904,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Other Anatomic Concept,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C548,Therapeutic Hormone,Therapeutic Hormone|Synthetic Hormone,Any synthetic or animal-derived agent that is chemically identical or similar to an endogenous hormone with therapeutic application.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Therapeutic Hormone|Synthetic Hormone,,,,NCIT:C548,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Therapeutic Hormone,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any synthetic or animal-derived agent that is chemically identical or similar to an endogenous hormone with therapeutic application.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_43968,meropenem,,A carbapenemcarboxylic acid in which the azetidine and pyrroline rings carry 1-hydroxymethyl and in which the azetidine and pyrroline rings carry 1-hydroxymethyl and 5-(dimethylcarbamoyl)pyrrolidin-3-ylthio substituents respectively.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:43968,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,meropenem,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A carbapenemcarboxylic acid in which the azetidine and pyrroline rings carry 1-hydroxymethyl and in which the azetidine and pyrroline rings carry 1-hydroxymethyl and 5-(dimethylcarbamoyl)pyrrolidin-3-ylthio substituents respectively.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000328,pork shoulder blade,,The section of a pork shoulder that includes the blade and 7-bone.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000328,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pork shoulder blade,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The section of a pork shoulder that includes the blade and 7-bone.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0000257,DNA extraction,,A DNA extraction is a nucleic acid extraction where the desired output material is DNA.,FALSE,,,,,,,,,,,,,,,,,,,,,OBI branch derived,,,,,DNA extraction,,,,,http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0000257,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DNA extraction,,,,,,,,,,,,,,,,,,,,,,,,,,,,PlanAndPlannedProcess Branch,,,,A DNA extraction is a nucleic acid extraction where the desired output material is DNA.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530051,unripe,,A fruit ripeness characteristic in which a fruit has not achieved full maturity and is not slightly ripe.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0051,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530051,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,unripe,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A fruit ripeness characteristic in which a fruit has not achieved full maturity and is not slightly ripe.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_33300,pnictogen,,"Any p-block element atom that is in group 15 of the periodic table: nitrogen, phosphorus, arsenic, antimony and bismuth.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:33300,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,pnictogen,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Any p-block element atom that is in group 15 of the periodic table: nitrogen, phosphorus, arsenic, antimony and bismuth.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00002645,food material by process,,Food material organized by the process which it results from.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00002645,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food material by process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Food material organized by the process which it results from.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001836,NCBI BioProject standard,,"The National Center for Biotechnology Information BioProject standard is a collection of datums that describe biological data related to a single initiative, originating from a single organization or from a consortium.  A BioProject record provides users a single place to find links to the diverse data types generated for that project.",FALSE,,,,,,,,,,,,,,NCBI lists project data type and other controlled vocabulary fields at : https://www.ncbi.nlm.nih.gov/books/NBK54364/,,,,,,,http://www.ncbi.nlm.nih.gov/bioproject/,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0002147|http://purl.obolibrary.org/obo/GENEPIO_0002128,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001836,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI BioProject standard,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"The National Center for Biotechnology Information BioProject standard is a collection of datums that describe biological data related to a single initiative, originating from a single organization or from a consortium.  A BioProject record provides users a single place to find links to the diverse data types generated for that project.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100942,composite sampling device,,"A specimen collection device designed to collect and combine multiple individual samples over a defined time period, flow interval, or spatial range into a single aggregated sample.",FALSE,,,,,,,composite sampler,,,,,,,"May operate automatically (e.g., time-weighted or flow-proportional sampling), often used to represent average conditions over time or space",,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100942,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-11-20T16:24:25Z,,,,,,,,,,,,,,,,,,,composite sampling device,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A specimen collection device designed to collect and combine multiple individual samples over a defined time period, flow interval, or spatial range into a single aggregated sample.",,,,,,,,
http://purl.obolibrary.org/obo/HP_0030884,Gastrojejunal tube feeding in infancy,Gastro-jejunal tube feeding in infancy,Feeding problem necessitating gastrojejunal tube feeding.,FALSE,,,,,,,,,,,,,,The rationale for gastrojejunal tube feeding is that placing the tip of the tube beyond the ligament of Treitz prevented duodenogastric reflux or gastro-esophageal reflux. Gastrojejunal feeding tubes have since been used in children who are deemed too unfit for antireflux surgery or where fundoplication has failed.,,,,,,,,,,,,,,,,,,UMLS:C4280681,,,,,,,,,,,,,,,,,,,,,,,,,Gastro-jejunal tube feeding in infancy,,,,HP:0030884,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Gastrojejunal tube feeding in infancy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Feeding problem necessitating gastrojejunal tube feeding.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C124295,Pregnant,Pregnant|PREGNANT,Observed to be or have been pregnant.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Pregnant|PREGNANT,,,,NCIT:C124295,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,http://purl.obolibrary.org/obo/ICO_0000288,,,,,,Pregnant,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Observed to be or have been pregnant.,,,,,,,,
http://purl.obolibrary.org/obo/IAO_0000577,centrally registered identifier symbol,,A symbol that is part of a CRID and that is sufficient to look up a record from the CRID's registry.,FALSE,,,,,,,CRID symbol,,,,,,,"Damion notes: Subclasses can actually have two components - the identifier, and the agency it is associated with.  

Under the general concept of ""postal code"" one can place particular national postal code systems like the US Postal code.",,,,,,,"Original proposal from Bjoern, discussions at IAO calls",,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,IAO:0000577,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/iao.owl,,,,,,,,,centrally registered identifier symbol,,,,,,,,,,,,,,,,,,,,,,,,,,,,PERSON: Melanie Courtot|PERSON: Bjoern Peters|PERSON: Bill Hogan|PERSON: Alan Ruttenberg,,,,A symbol that is part of a CRID and that is sufficient to look up a record from the CRID's registry.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C13229,Embryonic Structure,Embryonic Structure|Embryologic Structure,"A body part, organ or organ component that is formed during the embryonic stage of life of an organism.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Embryonic Structure|Embryologic Structure,,,,NCIT:C13229,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Embryonic Structure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A body part, organ or organ component that is formed during the embryonic stage of life of an organism.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_65,connective tissue disease,,"A musculoskeletal system disease that affects tissues such as skin, tendons, and cartilage.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:65,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,connective tissue disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A musculoskeletal system disease that affects tissues such as skin, tendons, and cartilage.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100325,NCBI SRA library source,library source,PCDS: Provide the library source by selecting a value from the pick list. For amplicon sequencing select 'Viral RNA'.,FALSE,,,,,,,PCDS:ncbi_sra_library_source,,,,,,,PCDS: Provide the library source by selecting a value from the pick list. For amplicon sequencing select 'Viral RNA'.,,,,,,,,,,,"These metadata fields are defined specifically for use with the NCBI SRA submission template. They are organizational constructs intended to support a particular template and underlying database and should not be reused to model metadata outside the intended context. Where possible, more general, template‑independent terms should be used instead.",,,PCDS: TRANSCRIPTOMIC,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,library source,NCBI SRA library_source,,,,GENEPIO:0100325,,,,,,,,,,,,,,2026-01-29T00:00:09.532Z,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0001965,,,,,,NCBI SRA library source,,,,,,,,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/core/assets/sra/files/SRA_metadata_acc_example.xlsx,,,,,,,,,,,,PCDS: See NCBI SRA template for details.,,,,,,
http://purl.obolibrary.org/obo/MONDO_0021698,alcohol-related disorders,,Disorders related to or resulting from abuse or mis-use of alcohol.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0236664|SCTID:29212009|MESH:D019973|MEDGEN:68632,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MONDO:0021698,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,alcohol-related disorders,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Disorders related to or resulting from abuse or mis-use of alcohol.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02021028,butchery cut of buffalo,,A piece of buffalo meat which has been cut according to butchery practice.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02021028,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,butchery cut of buffalo,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A piece of buffalo meat which has been cut according to butchery practice.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0037722,right retropharyngeal lymph node,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:224626,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0037722,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,right retropharyngeal lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0037723,left retropharyngeal lymph node,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:224628,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0037723,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,left retropharyngeal lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000122,travel end date,,The date of a person's return to some residence from a journey originating at that residence.,FALSE,,,,,http://purl.obolibrary.org/obo/GENEPIO_0000121,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,travel end date,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,The date of a person's return to some residence from a journey originating at that residence.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C121416,Loss of Fine Movements,Loss of fine movements|Loss of Fine Movements,"A response indicating that a person has lost their ability for fine movement: cannot button, write, eat, etc., or minor loss of sensitivity.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Loss of fine movements|Loss of Fine Movements,,,,NCIT:C121416,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Loss of Fine Movements,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A response indicating that a person has lost their ability for fine movement: cannot button, write, eat, etc., or minor loss of sensitivity.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490189,steel plate container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0189,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490189,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,steel plate container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002009,"TB lineage 2 - East-Asian, includes Bejing",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002009,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"TB lineage 2 - East-Asian, includes Bejing",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03411041,chemical food component,,A food material which is a chemical or chemical mixture that exists in a food material or was added to a food material.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=B2973|http://www.langual.org/langual_thesaurus.asp?termid=B1041,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03411041,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,chemical food component,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A food material which is a chemical or chemical mixture that exists in a food material or was added to a food material.,,,,,,,,
https://w3id.org/linkml/SlotDefinition,SlotDefinition,,The definition of a property or a slot.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,linkml:SlotDefinition,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The definition of a property or a slot.,,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000607,proportion,,a proportion is a ratio which corresponds to the fraction of the total presenting a particular feature,FALSE,,,,,,,,,,,,,,,,,,,,,COKA group,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000607,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,proportion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,a proportion is a ratio which corresponds to the fraction of the total presenting a particular feature,,,,,,,,
http://purl.obolibrary.org/obo/HP_0003745,Sporadic,No previous family history|Isolated cases,"Cases of the disease in question occur without a previous family history, i.e., as isolated cases without being transmitted from a parent and without other siblings being affected.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C1853237,,,,,,,,,,,,,,,,,,,,,,,HP:0003769|HP:0003747|HP:0001420,,No previous family history|Isolated cases,,,,HP:0003745,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Sporadic,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Cases of the disease in question occur without a previous family history, i.e., as isolated cases without being transmitted from a parent and without other siblings being affected.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490172,plastic container,,Corresponds to FSTA Thesaurus Packaging 2.2.1 Plastic container.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0172,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490172,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,plastic container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Corresponds to FSTA Thesaurus Packaging 2.2.1 Plastic container.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100029,tracheal aspiration,,An aspiration process which collects tracheal secretions.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100029,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,tracheal aspiration,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An aspiration process which collects tracheal secretions.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C45322,Storage Unit,Unit|StorageEquipment|Storage Unit|Storage Device,A physical structure or device capable of holding objects or samples.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Unit|StorageEquipment|Storage Unit|Storage Device,,,,NCIT:C45322,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Storage Unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A physical structure or device capable of holding objects or samples.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100140,Oxford Nanopore sequencing instrument model,,A DNA sequencer manufactured by the Oxford Nanopore corporation.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100140,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,Oxford Nanopore sequencing instrument model,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A DNA sequencer manufactured by the Oxford Nanopore corporation.,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0012268,AIDS,"acquired immunodeficiency syndrome, AIDS|acquired immunodeficiency disease|acquired immune deficiency|AIDS, acquired immunodeficiency syndrome|AIDS","A syndrome resulting from the acquired deficiency of cellular immunity caused by the human immunodeficiency virus (HIV). It is characterized by the reduction of the Helper T-lymphocytes in the peripheral blood and the lymph nodes. Symptoms include generalized lymphadenopathy, fever, weight loss, and chronic diarrhea. Patients with AIDS are especially susceptible to opportunistic infections (usually pneumocystis carinii pneumonia, cytomegalovirus (CMV) infections, tuberculosis, candida infections, and cryptococcosis), and the development of malignant neoplasms (usually non-Hodgkin lymphoma and Kaposi sarcoma). The human immunodeficiency virus is transmitted through sexual contact, sharing of contaminated needles, or transfusion of contaminated blood.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0001175|SCTID:62479008|NCIT:C2851|NANDO:2200809|NANDO:2100212|MESH:D000163|MEDGEN:99|EFO:0000765|DOID:635,,,,,,,,,,,,,,,,,,,,,,,,,"acquired immunodeficiency syndrome, AIDS|acquired immunodeficiency disease|acquired immune deficiency|AIDS, acquired immunodeficiency syndrome|AIDS",,,,MONDO:0012268,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#rare|http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar|http://purl.oboInOwllibrary.org/oboInOwl/mondo#inferred_rare,,,,,,,,AIDS,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A syndrome resulting from the acquired deficiency of cellular immunity caused by the human immunodeficiency virus (HIV). It is characterized by the reduction of the Helper T-lymphocytes in the peripheral blood and the lymph nodes. Symptoms include generalized lymphadenopathy, fever, weight loss, and chronic diarrhea. Patients with AIDS are especially susceptible to opportunistic infections (usually pneumocystis carinii pneumonia, cytomegalovirus (CMV) infections, tuberculosis, candida infections, and cryptococcosis), and the development of malignant neoplasms (usually non-Hodgkin lymphoma and Kaposi sarcoma). The human immunodeficiency virus is transmitted through sexual contact, sharing of contaminated needles, or transfusion of contaminated blood.",,,,,,,,
http://purl.obolibrary.org/obo/OBI_0002767,amplicon sequencing assay,,A sequencing assay in which a DNA or RNA input molecule is amplified by PCR and the product sequenced.,FALSE,,,,,,,,,,,,,,,,,,,,,PMID:31450270|PMID:29628929,,,,,amplicon sequencing assay,,,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0002767,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,amplicon sequencing assay,,,,,,,,,,,,,,,,,,,,,,,,,,,,Suvarna Nadendla|Rebecca Jackson|Michelle Giglio,,,,A sequencing assay in which a DNA or RNA input molecule is amplified by PCR and the product sequenced.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0001081,Cholelithiasis,Gallstones,"Hard, pebble-like deposits that form within the gallbladder.",FALSE,,,,,,,,,,,,,,Gallstones range in size from as small as a grain of sand to as large as a golf ball. Cholesterol gallstones are the most common type of gallstone. Gallstones resulting from too much bilirubin in the bile are referred to as pigment stones.,,,,,,,,,,,,,,,,,,UMLS:C0008350|SNOMEDCT_US:266474003,,,,,,,,,,,,,,,,,,,,,,,,,Gallstones,,,,HP:0001081,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Cholelithiasis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Hard, pebble-like deposits that form within the gallbladder.",,,,,,,,
http://purl.obolibrary.org/obo/HP_0012418,Hypoxemia,Low blood oxygen level,An abnormally low level of blood oxygen.,FALSE,,,,,,,,,,,,,,Note that hypoxemia is defined as a condition where arterial oxygen tension is below normal (80-100mmHg). Hypoxia is defined as the failure of oxygenation at the tissue level. Hypoxia is not measured directly by a standard laboratory value.,,,,,,,,,,,,,,,,,,UMLS:C0700292|SNOMEDCT_US:389087006,,,,,,,,,,,,,,,,,,,,,,,,,Low blood oxygen level,,,,HP:0012418,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Hypoxemia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An abnormally low level of blood oxygen.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0012417,Hypocapnia,Reduced carbon dioxide in the blood|Hypocarbia,Abnormally reduced blood carbon dioxide (CO2) level.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0085383|SNOMEDCT_US:61031008,,,,,,,,,,,,,,,,,,,,,,,,,Reduced carbon dioxide in the blood|Hypocarbia,,,,HP:0012417,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Hypocapnia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Abnormally reduced blood carbon dioxide (CO2) level.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0012415,Abnormal blood gas level,Abnormal blood gas level,An abnormality of the partial pressure of oxygen or carbon dioxide in the arterial blood.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0476337|SNOMEDCT_US:312391003,,,,,,,,,,,,,,,,,,,,,,,,,Abnormal blood gas level,,,,HP:0012415,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal blood gas level,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An abnormality of the partial pressure of oxygen or carbon dioxide in the arterial blood.,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0005275,lung disorder,pulmonary disorders|pulmonary disorder|pulmonary diseases|pulmonary disease|lung disorders|lung disorder|lung disease or disorder|lung disease|disorder of lung|disease or disorder of lung|disease of lung,A disease involving the lung.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0024115|SCTID:19829001|NCIT:C3198|MESH:D008171|MEDGEN:7399|ICD9:518.89|EFO:0003818|DOID:850,,,,,,,,,,,,,,,,,,,,,,,,,pulmonary disorders|pulmonary disorder|pulmonary diseases|pulmonary disease|lung disorders|lung disorder|lung disease or disorder|lung disease|disorder of lung|disease or disorder of lung|disease of lung,,,,MONDO:0005275,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,lung disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A disease involving the lung.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0002583,Colitis,,"Colitis refers to an inflammation of the colon and is often used to describe an inflammation of the large intestine (colon, cecum and rectum). Colitides may be acute and self-limited or chronic, and broadly fit into the category of digestive diseases.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0009319|SNOMEDCT_US:64226004,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0002583,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Colitis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Colitis refers to an inflammation of the colon and is often used to describe an inflammation of the large intestine (colon, cecum and rectum). Colitides may be acute and self-limited or chronic, and broadly fit into the category of digestive diseases.",,,,,,,,
http://purl.obolibrary.org/obo/HP_0002587,Projectile vomiting,Projectile vomiting,Vomiting that ejects the gastric contents with great force.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0221151|SNOMEDCT_US:8579004,,,,,,,,,,,,,,,,,,,,,,,,,Projectile vomiting,,,,HP:0002587,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Projectile vomiting,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Vomiting that ejects the gastric contents with great force.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_37407,cyclic ether,,Any ether in which the oxygen atom forms part of a ring.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:37406,,,,,,CHEBI:37407,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,cyclic ether,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any ether in which the oxygen atom forms part of a ring.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C43186,Container,Container|CONTAINER,An object that can be used to hold things.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Container|CONTAINER,,,,NCIT:C43186,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An object that can be used to hold things.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_24676,hydroxybenzoic acid,,Any benzoic acid carrying one or more phenolic hydroxy groups on the benzene ring.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:50778,,,,,,CHEBI:24676,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,hydroxybenzoic acid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any benzoic acid carrying one or more phenolic hydroxy groups on the benzene ring.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001086,HIV risk status,,"",FALSE,,,,,,,,,,,,,,,,,,,,,"",,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001086,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HIV risk status,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510220,"food allergen labelling about milk and products thereof, including lactose",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0220,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510220,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"food allergen labelling about milk and products thereof, including lactose",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100097,hyperinflammatory shock,,"A systemtic inflammatory response to infectious and/or non-fectious etiologies, resulting in life-threatening, generalized form of acute circulatory failure associated with inadequate oxygen utilization by the cells.",FALSE,,,,,,,,,,,,,,Descriptive of both infectious and non-infectious etiologies.,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100097,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,hyperinflammatory shock,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A systemtic inflammatory response to infectious and/or non-fectious etiologies, resulting in life-threatening, generalized form of acute circulatory failure associated with inadequate oxygen utilization by the cells.",,,,,,,,
http://www.ebi.ac.uk/efo/EFO_0000482,event free survival time,,"Is the survival of a subject (or group of subjects) measured from the date of diagnosis until  locoregional or systemic recurrence,  second malignancy, or death from any cause or disease progression or relapse, institution of new unplanned anticancer treatment, or death from any cause.",FALSE,,,,,,,,,,,,,,,,,,,,,http://en.wikibooks.org/wiki/Radiation_Oncology/Survival_curve_terminology,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,efo:EFO_0000482,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,event free survival time,,,,,,,,,,,,,,,,,,,,,,,,,,,,James Malone,,,,"Is the survival of a subject (or group of subjects) measured from the date of diagnosis until  locoregional or systemic recurrence,  second malignancy, or death from any cause or disease progression or relapse, institution of new unplanned anticancer treatment, or death from any cause.",,,,,,,,
http://purl.obolibrary.org/obo/ECTO_5000000,exposure to geographic feature,geographic feature exposure,A exposure event involving the interaction of an exposure receptor to geographic feature.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,geographic feature exposure,,,,ECTO:5000000,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ecto.owl,,,,,,,,,exposure to geographic feature,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A exposure event involving the interaction of an exposure receptor to geographic feature.,,,,,,,,
http://purl.obolibrary.org/obo/ECTO_5000009,exposure to campground,campground exposure,A exposure event involving the interaction of an exposure receptor to campground.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,campground exposure,,,,ECTO:5000009,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ecto.owl,,,,,,,,,exposure to campground,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A exposure event involving the interaction of an exposure receptor to campground.,,,,,,,,
http://purl.obolibrary.org/obo/ECTO_5000008,exposure to petting zoo,petting zoo exposure,A exposure event involving the interaction of an exposure receptor to petting zoo.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,petting zoo exposure,,,,ECTO:5000008,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ecto.owl,,,,,,,,,exposure to petting zoo,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A exposure event involving the interaction of an exposure receptor to petting zoo.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000171,beef sirloin bavette flap,,A boneless cut with a hearty texture that’s a good source for fajita meat.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000171,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef sirloin bavette flap,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A boneless cut with a hearty texture that’s a good source for fajita meat.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01001000,environmental system determined by an organism,,An environmental system which is determined by a living organism.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01001000,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,envoOmics|envoEmpo,,,,,,,,environmental system determined by an organism,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental system which is determined by a living organism.,,,,,,,,
http://purl.obolibrary.org/obo/PO_0009011,plant structure,,"A plant anatomical entity (PO:0025131) that is, or was, part of a plant, or was derived from a part of a plant.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PO_GIT:57|http://www.langual.org/langual_thesaurus.asp?termid=C0174,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PO:0009011,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,plant structure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A plant anatomical entity (PO:0025131) that is, or was, part of a plant, or was derived from a part of a plant.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100290,pre-existing conditions and risk factors at time of specimen collection,,A personal health datum which specifies host pre-existing conditions and risk factors at time of specimen collection.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100290,,,,,,,,,,,,,,2022-01-31T23:52:41Z,,,,,,,,,,,,,http://purl.obolibrary.org/obo/OBI_0001619|http://purl.obolibrary.org/obo/GENEPIO_0001548,,,,,,pre-existing conditions and risk factors at time of specimen collection,,,,,,,,,,,,,,,,,,,,,,,,,,,,0000-0002-9578-0788,,,,A personal health datum which specifies host pre-existing conditions and risk factors at time of specimen collection.,,,,,,,,
http://purl.obolibrary.org/obo/IAO_0000300,textual entity,,"A textual entity is a part of a manifestation (FRBR sense), a generically dependent continuant whose concretizations are patterns of glyphs intended to be interpreted as words, formulas, etc.",FALSE,,,,,,,text,,,,,,,,,,,,,,,,,,"MC, 2009-09-14 (following IAO call 2009-09-01): textual entities live at the FRBR (http://en.wikipedia.org/wiki/Functional_Requirements_for_Bibliographic_Records) manifestation level. Everything is significant: line break, pdf and html versions of same document are different textual entities.|AR, (IAO call 2009-09-01): a document as a whole is not typically a textual entity, because it has pictures in it - rather there are parts of it that are textual entities. Examples: The title, paragraph 2 sentence 7, etc.",textual entity,,,,,http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,IAO:0000300,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/iao.owl,,,,,,,,,textual entity,,,,,,,,,,,,,,,,,,,,,,,,,,,,PERSON: Lawrence Hunter,,,,"A textual entity is a part of a manifestation (FRBR sense), a generically dependent continuant whose concretizations are patterns of glyphs intended to be interpreted as words, formulas, etc.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000020,"beef top round steak (cap off, boneless, raw)",,A raw and boneless beef top round steak in which the top cap portion has been separated off.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000020,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"beef top round steak (cap off, boneless, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw and boneless beef top round steak in which the top cap portion has been separated off.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03460330,food surface mold curing,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=H0330,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03460330,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food surface mold curing,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00002258,loam,,"A soil which is composed of approximately equal proportions of sand and silt, with a smaller proportion of clay.",FALSE,,,,,,,,,,,,,,"Some authorities consider loam to be any soil material that contains 7 to 27% clay, 28 to 50% silt, and less than 52% sand.",,,,,,,,,,,,,,,,,,SWEETRealm:Loam|EcoLexicon:loam,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00002258,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,loam,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A soil which is composed of approximately equal proportions of sand and silt, with a smaller proportion of clay.",,,,,,,,
http://purl.obolibrary.org/obo/ARO_3004367,Deutsches Institut für Normung (DIN),,"DIN is recognized by the Federal Government of Germany as the competent standards organization for Germany and as the national standards body representing Germany in non-governmental international standards organizations. Baquero F. found that the DIN system recommends lower breakpoints than the consensus standard of all systems for antimicrobial susceptibility testing used in Europe (BSAC, DIN, SFM, SIR, NCCLS and WRG).",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DIN,,,,,,ARO:3004367,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/aro.owl,,,,,,,,,Deutsches Institut für Normung (DIN),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"DIN is recognized by the Federal Government of Germany as the competent standards organization for Germany and as the national standards body representing Germany in non-governmental international standards organizations. Baquero F. found that the DIN system recommends lower breakpoints than the consensus standard of all systems for antimicrobial susceptibility testing used in Europe (BSAC, DIN, SFM, SIR, NCCLS and WRG).",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100185,contact with patient exposure process,,A process occuring within or in the vicinity of a human patient that exposes the recipient organism to a material entity.,FALSE,,,,,,,Contact with Patient,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100185,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,contact with patient exposure process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A process occuring within or in the vicinity of a human patient that exposes the recipient organism to a material entity.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000057,Stx1 cell culture level,,A measurement datum which describes the level of Stx1 toxin derived tissue culture toxicity.,FALSE,,,,,,,,,,,,,,,,,,,,,GROUP: IRIDA Ontology (Emma),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000057,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,http://purl.obolibrary.org/obo/OMIT_0020917,,,,,,Stx1 cell culture level,,,,,Lab Analytic,,,,,,,,,,,,,,,,,,,,,,Stx1 Cell Culture,,,NML Labware LIMS,,A measurement datum which describes the level of Stx1 toxin derived tissue culture toxicity.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03500035,food-grade wood surface,,A surface made out of food-grade wood.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=N0035,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03500035,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food-grade wood surface,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A surface made out of food-grade wood.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_1024,leprosy,,"A primary bacterial infectious disease that results_in infection located_in superficial peripheral nerves, located_in skin, located_in mucous membranes of the upper respiratory tract, located_in anterior chamber of the eyes, or located_in testes, has_material_basis_in Mycobacterium leprae, which is transmitted_by aerosol spread from infected nasal secretions to exposed nasal and oral mucosa. The infection has_symptom skin lesions, has_symptom sensory loss, has_symptom motor loss and has_symptom eye damage.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:1024,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,leprosy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A primary bacterial infectious disease that results_in infection located_in superficial peripheral nerves, located_in skin, located_in mucous membranes of the upper respiratory tract, located_in anterior chamber of the eyes, or located_in testes, has_material_basis_in Mycobacterium leprae, which is transmitted_by aerosol spread from infected nasal secretions to exposed nasal and oral mucosa. The infection has_symptom skin lesions, has_symptom sensory loss, has_symptom motor loss and has_symptom eye damage.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_10242,ehrlichiosis,,"A primary bacterial infectious disease that results in infection located_in leukocyte, has_material_basis_in Ehrlichia chaffeensis or Anaplasma phagocytophilum, which are transmitted_by lone star tick and transmitted_by black-legged tick respectively. The infection has_symptom headache, has_symptom muscle aches, has_symptom fatigue and has_symptom rash.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:10242,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,ehrlichiosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A primary bacterial infectious disease that results in infection located_in leukocyte, has_material_basis_in Ehrlichia chaffeensis or Anaplasma phagocytophilum, which are transmitted_by lone star tick and transmitted_by black-legged tick respectively. The infection has_symptom headache, has_symptom muscle aches, has_symptom fatigue and has_symptom rash.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0002186,bronchiole,,The conducting airway of the lungs found terminal to the bronchi; these structures contain neither cartilage nor mucous-secreting glands; the epithelium of the bronchioles becomes thinner with each branching.,FALSE,,,,,,,,,,,,,,"In some texts/references/ontologies, bronchiole has been used as an exact synonym of 'lobular bronchiole'. However, a 'lobular bronchiole' is a segment of a bronchiole.",,,,,,,,,,,,,,,,,,Wikipedia:Bronchiole|VHOG:0000675|UMLS:C0006270|SCTID:278982001|NCIT:C12684|MESH:D055745|MA:0000422|FMA:7410|EMAPA:32697|EHDAA:8221|EHDAA:8199|EHDAA:8183|EHDAA:8171|CALOHA:TS-2003|BTO:0002375,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0002186,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,bronchiole,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The conducting airway of the lungs found terminal to the bronchi; these structures contain neither cartilage nor mucous-secreting glands; the epithelium of the bronchioles becomes thinner with each branching.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0002185,bronchus,bronchial trunk|bronchi,The upper conducting airways of the lung; these airways arise from the terminus of the trachea.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,XAO:0000121|Wikipedia:Bronchus|VHOG:0000262|UMLS:C0006255|SCTID:181215002|NCIT:C12683|MIAA:0000133|MESH:D001980|MAT:0000133|MA:0000436|GAID:346|FMA:7409|EV:0100041|EMAPA:32689|EFO:0000932|CALOHA:TS-1229|BTO:0001340,,,,,,,,,,,,,,,,,,,,,,,,,bronchial trunk|bronchi,,,,UBERON:0002185,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,bronchus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The upper conducting airways of the lung; these airways arise from the terminus of the trachea.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_26399,purine ribonucleoside,,A ribonucleoside that has a purine moiety as the nucleobase (the R group in the illustration).,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:26399,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,purine ribonucleoside,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A ribonucleoside that has a purine moiety as the nucleobase (the R group in the illustration).,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490124,"plastic tray or pan, plastic cover or wrapping",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0124,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490124,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"plastic tray or pan, plastic cover or wrapping",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000091,assembly status,,An assembly quality control datum that describes the status of the assembly which is categorised from draft to finished.,FALSE,,,,,,,,,,,,,,"""Attempting to convey the relative integrity and reliability of the data, six levels or terms have been proposed and applied to describe genome sequences.""   See subclass choices.",,,,,,,"CITATION: Chain, P.S., Grafham, D.V., Fulton, R.S., Fitzgerald, M.G., Hostetler, J., Muzny, D., Ali, J., Birren, B., Bruce, D.C., Buhay, C., et al. (2009). Genomics. Genome project standards in a new era of sequencing. Science 326, 236-237.",,,,,,,standard draft or finished,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000091,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,,,,,,,assembly status,,,,,Assembly QC,,,,,,,,,,,,,,,,,,,,,,Assembly status,Damion Dooley,,"from within ""Finishing strategy"" in GROUP: MIxS",,An assembly quality control datum that describes the status of the assembly which is categorised from draft to finished.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100046,hospitalized (ICU) datum,Hospitalized (intensive care units),The condition of being treated as a patient in a hospital intensive care unit (ICU).,FALSE,,,,,,,Hospitalized (ICU),,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,Hospitalized (intensive care units),,,,GENEPIO:0100046,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,hospitalized (ICU) datum,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The condition of being treated as a patient in a hospital intensive care unit (ICU).,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0766,Utah residents (CEPH) with Northern and Western European ancestry  (1KGP),CEU|CEPH,"A population made up of 184 samples from individuals resident in Utah (CEPH) with Northern and Western European ancestry recruited in Utah, USA as part of the 1000 Genomes Project. The population was assigned by the collecting project to the superpopulation European.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CEU|CEPH,,,,HANCESTRO:0766,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Utah residents (CEPH) with Northern and Western European ancestry  (1KGP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A population made up of 184 samples from individuals resident in Utah (CEPH) with Northern and Western European ancestry recruited in Utah, USA as part of the 1000 Genomes Project. The population was assigned by the collecting project to the superpopulation European.",,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0764,Tuscan in Italy (HGDP),Tuscan,A population made up of 6 samples from Tuscan individuals recruited in Italy as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation European.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Tuscan,,,,HANCESTRO:0764,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Tuscan in Italy (HGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 6 samples from Tuscan individuals recruited in Italy as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation European.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0761,Orcadian in Orkney (HGDP),Orcadian,A population made up of 13 samples from Orcadian individuals recruited in Orkney as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation European.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Orcadian,,,,HANCESTRO:0761,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Orcadian in Orkney (HGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 13 samples from Orcadian individuals recruited in Orkney as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation European.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0760,French in France (HGDP),French,A population made up of 24 samples from French individuals recruited in France as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation European.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,French,,,,HANCESTRO:0760,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,French in France (HGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 24 samples from French individuals recruited in France as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation European.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0762,Russian in Russia (HGDP),Russian,A population made up of 23 samples from Russian individuals recruited in Russia as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation European.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Russian,,,,HANCESTRO:0762,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Russian in Russia (HGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 23 samples from Russian individuals recruited in Russia as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation European.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0768,Iberian populations in Spain (1KGP),Iberian|IBS,A population made up of 162 samples from Iberian populations individuals recruited in Spain as part of the 1000 Genomes Project. The population was assigned by the collecting project to the superpopulation European.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Iberian|IBS,,,,HANCESTRO:0768,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Iberian populations in Spain (1KGP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 162 samples from Iberian populations individuals recruited in Spain as part of the 1000 Genomes Project. The population was assigned by the collecting project to the superpopulation European.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0769,Toscani in Italy (1KGP),Toscani|TSI,A population made up of 112 samples from Toscani individuals recruited in Italy as part of the 1000 Genomes Project. The population was assigned by the collecting project to the superpopulation European.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Toscani|TSI,,,,HANCESTRO:0769,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Toscani in Italy (1KGP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 112 samples from Toscani individuals recruited in Italy as part of the 1000 Genomes Project. The population was assigned by the collecting project to the superpopulation European.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0763,Sardinian in Italy (HGDP),Sardinian,A population made up of 24 samples from Sardinian individuals recruited in Italy as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation European.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Sardinian,,,,HANCESTRO:0763,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Sardinian in Italy (HGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 24 samples from Sardinian individuals recruited in Italy as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation European.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0765,British in England and Scotland (1KGP),GBR|British,A population made up of 107 samples from British individuals recruited in England and Scotland as part of the 1000 Genomes Project. The population was assigned by the collecting project to the superpopulation European.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GBR|British,,,,HANCESTRO:0765,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,British in England and Scotland (1KGP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 107 samples from British individuals recruited in England and Scotland as part of the 1000 Genomes Project. The population was assigned by the collecting project to the superpopulation European.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0767,Finnish in Finland (1KGP),Finnish|FIN,A population made up of 105 samples from Finnish individuals recruited in Finland as part of the 1000 Genomes Project. The population was assigned by the collecting project to the superpopulation European.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Finnish|FIN,,,,HANCESTRO:0767,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Finnish in Finland (1KGP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 105 samples from Finnish individuals recruited in Finland as part of the 1000 Genomes Project. The population was assigned by the collecting project to the superpopulation European.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_32988,amide,,An amide is a derivative of an oxoacid R<small><sub><em>k</em></sub></small>E(=O)<small><sub><em>l</em></sub></small>(OH)<small><sub><em>m</em></sub></small> (<em>l</em> ≠ 0) in which an acidic hydroxy group has been replaced by an amino or substituted amino group.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:2633|CHEBI:22473,,,,,,CHEBI:32988,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,amide,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An amide is a derivative of an oxoacid R<small><sub><em>k</em></sub></small>E(=O)<small><sub><em>l</em></sub></small>(OH)<small><sub><em>m</em></sub></small> (<em>l</em> ≠ 0) in which an acidic hydroxy group has been replaced by an amino or substituted amino group.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C3333,Pneumonia,"pneumonia|Pneumonia, NOS|Pneumonia|Patient_developed_pneumonia","An acute, acute and chronic, or chronic inflammation focally or diffusely affecting the lung parenchyma, due to infections (viruses, fungi, mycoplasma, or bacteria), treatment (e.g. radiation), or exposure (inhalation) to chemicals. Symptoms include cough, shortness of breath, fevers, chills, chest pain, headache, sweating, and weakness.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"pneumonia|Pneumonia, NOS|Pneumonia|Patient_developed_pneumonia",,,,NCIT:C3333,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Pneumonia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An acute, acute and chronic, or chronic inflammation focally or diffusely affecting the lung parenchyma, due to infections (viruses, fungi, mycoplasma, or bacteria), treatment (e.g. radiation), or exposure (inhalation) to chemicals. Symptoms include cough, shortness of breath, fevers, chills, chest pain, headache, sweating, and weakness.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C12801,Tissue,"tissue|Tissues|Tissue, NOS|Tissue|TISSUE|Normal Tissue|Normal","An anatomical structure consisting of similarly specialized cells and intercellular matrix, aggregated according to genetically determined spatial relationships, performing a specific function.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"tissue|Tissues|Tissue, NOS|Tissue|TISSUE|Normal Tissue|Normal",,,,NCIT:C12801,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Tissue,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An anatomical structure consisting of similarly specialized cells and intercellular matrix, aggregated according to genetically determined spatial relationships, performing a specific function.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_73754,thiosugar,,"A carbohydrate derivative in which one or more of the oxygens or hydroxy groups of the parent carbohydrate is replaced by sulfur or -SR, where R can be hydrogen or any group.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:73754,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,thiosugar,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A carbohydrate derivative in which one or more of the oxygens or hydroxy groups of the parent carbohydrate is replaced by sulfur or -SR, where R can be hydrogen or any group.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510097,no artificial colors claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0097,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510097,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,no artificial colors claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C48443,Standard Operating Procedure,standard operating procedures (SOPs)|Standard Operating Procedure|SOP,An established procedure to be followed in carrying out a given operation or in a given situation.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,standard operating procedures (SOPs)|Standard Operating Procedure|SOP,,,,NCIT:C48443,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Standard Operating Procedure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An established procedure to be followed in carrying out a given operation or in a given situation.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0030956,Abnormality of cardiovascular system electrophysiology,,An anomaly of the electrical conduction physiology of the heart.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0030956,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormality of cardiovascular system electrophysiology,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An anomaly of the electrical conduction physiology of the heart.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0030953,Conjunctival hyperemia,Conjunctival vascular congestion|Conjunctival injection|Conjunctival hyperaemia,Dilatation of the blood vessels of the conjunctiva leading to a red appearance of the sclera.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Conjunctival vascular congestion|Conjunctival injection|Conjunctival hyperaemia,,,,HP:0030953,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Conjunctival hyperemia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Dilatation of the blood vessels of the conjunctiva leading to a red appearance of the sclera.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001826,SWEETRealm,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001826,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SWEETRealm,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_33281,antimicrobial agent,,"A substance that kills or slows the growth of microorganisms, including bacteria, viruses, fungi and protozoans.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:22582,,,,,,CHEBI:33281,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,antimicrobial agent,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A substance that kills or slows the growth of microorganisms, including bacteria, viruses, fungi and protozoans.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C215116,Body Organ or System Test,Body Organ or System Test,Assessment of a body organ or a body system to find irregularities or dysfunction.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Body Organ or System Test,,,,NCIT:C215116,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Body Organ or System Test,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Assessment of a body organ or a body system to find irregularities or dysfunction.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020865,bison steak (raw),,A raw bison steak.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020865,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,bison steak (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw bison steak.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510098,no color added claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0098,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510098,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,no color added claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://www.ebi.ac.uk/efo/EFO_0004918,age at diagnosis,,"The age, measured from some defined time point e.g. birth at which a subject (e.g. a human patient) is diagnosed with some disease e.g. breast cancer.",FALSE,,,,,,,,,,,,,,,,,,,,,http://purl.bioontology.org/ontology/SNOMEDCT/423493009,,,,,,,,,,,SNOMEDCT:423493009,,,,,,,,,,,,,,,,,,,,,,,,,,,,,efo:EFO_0004918,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age at diagnosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,Helen Parkinson,,,,"The age, measured from some defined time point e.g. birth at which a subject (e.g. a human patient) is diagnosed with some disease e.g. breast cancer.",,,,,,,,
http://purl.obolibrary.org/obo/OBI_0002810,protective coverall,,"A personal protective clothing item which is a loose fitting coverall for ease of movement, with sleeves, full leggings and often a hood to cover the head. These can also include overshoe pieces to cover footwear and protect against contamination.",FALSE,,,,,,,,,,,,,,,,,,,,,https://www.safeopedia.com/definition/863/disposable-coveralls,,,,,protective coverall,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0002810,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,protective coverall,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://orcid.org/0000-0002-8844-9165,,,https://github.com/obi-ontology/obi/issues/1193,"A personal protective clothing item which is a loose fitting coverall for ease of movement, with sleeves, full leggings and often a hood to cover the head. These can also include overshoe pieces to cover footwear and protect against contamination.",,,,,,,,
http://purl.obolibrary.org/obo/UO_1010040,teaspoon based unit,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:1010040,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,teaspoon based unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020174,"piece of chicken (with skin, raw)",,A piece of chicken that contains the skin and is raw.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020174,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"piece of chicken (with skin, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A piece of chicken that contains the skin and is raw.,,,,,,,,
http://semanticscience.org/resource/SIO_001322,IP number,,an IP number is an number to connect to a device on the internet.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,resource:SIO_001322,,,,,,,,,,,,,,,,,,,,,,,,http://semanticscience.org/ontology/sio.owl,,,,,,,,,IP number,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,an IP number is an number to connect to a device on the internet.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03315883,piece of poultry meat,,A piece of meat that is derived from a poultry.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://bioregistry.io/reference/siren:F15883,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03315883,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of poultry meat,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A piece of meat that is derived from a poultry.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0034241,Prenatal death,Intrauterine death|Death before birth,Death of a fetus in the uterus.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Intrauterine death|Death before birth,,,,HP:0034241,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl|http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Prenatal death,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Death of a fetus in the uterus.,,,,,,,,
http://purl.obolibrary.org/obo/OMIT_0003047,Biological Factors,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OMIT:0003047,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/omit.owl,,,,,,,,,Biological Factors,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002091,draft sequence repository data - submission to NCBI/DDBJ,,"",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002091,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,draft sequence repository data - submission to NCBI/DDBJ,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"",,,"order:
OBI:0001616 # specimen identifier
GENEPIO:0001644 # isolate identifier
GENEPIO:0001429 # strain identifier
GENEPIO:0001640 # specimen organism taxonomy
GENEPIO:0000113 # specimen category
OBI:0001619 # specimen collection date
GENEPIO:0001797 # specimen collector
GENEPIO:0001657 # geo_loc_name
GENEPIO:0001656 # latitude and longitude coord
GENEPIO:0000027 # specimen source context
GENEPIO:0001567 # subject organism taxonomy
GENEPIO:0001724 # subject organism common name
GENEPIO:0001617 # subject disease",,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001956,RACE method,,Rapid Amplification of cDNA Ends.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI SRA: RACE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001956,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,RACE method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Rapid Amplification of cDNA Ends.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001703,listeria serotype 3c,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001703,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,listeria serotype 3c,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002008,Mycobacterium tuberculosis lineage,,"A Mycobacterium tuberculosis lineage is a named family of strains of tuberculosis, named usually with reference to their shared geographic origin.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002008,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Mycobacterium tuberculosis lineage,,,,,,,,,,,,,,,,,,,,,,"Out-of-Africa migration and Neolithic coexpansion of Mycobacterium tuberculosis with modern humans
http://www.nature.com/ng/journal/v45/n10/full/ng.2744.html|A TB-Lineage identification tool using spoligotypes and MIRU data:
http://tbinsight.cs.rpi.edu/run_tb_lineage.html",,,,,,Damion Dooley,,,,"A Mycobacterium tuberculosis lineage is a named family of strains of tuberculosis, named usually with reference to their shared geographic origin.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002134,infectious disease cluster,,A disease cluster in which two or more cases have been linked by an infectious disease transmission process.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428|http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002134,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,infectious disease cluster,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A disease cluster in which two or more cases have been linked by an infectious disease transmission process.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001989,pool clone strategy,,Shotgun of pooled clones (usually BACs and Fosmids).,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI SRA: POOLCLONE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001989,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,pool clone strategy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Shotgun of pooled clones (usually BACs and Fosmids).,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_1773,Mycobacterium tuberculosis,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,Mycobacterium tuberculosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:1773,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Mycobacterium tuberculosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C16830,Medical Device,medical device|Medical Devices|Medical Device|Device|DEVICE,"Any physical object that is useful for prevention, diagnosis, monitoring, or treatment of disease or other conditions.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,medical device|Medical Devices|Medical Device|Device|DEVICE,,,,NCIT:C16830,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Medical Device,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Any physical object that is useful for prevention, diagnosis, monitoring, or treatment of disease or other conditions.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C154851,Step Father,"Stepfather|Step Father|FATHER, STEP",A male that is related to a child or children through marriage to their biological parent.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Stepfather|Step Father|FATHER, STEP",,,,NCIT:C154851,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Step Father,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A male that is related to a child or children through marriage to their biological parent.,,,,,,,,
http://purl.obolibrary.org/obo/RO_0002310,exposure event or process,,"A process occurring within or in the vicinity of an organism that exerts some causal influence on the organism via the interaction between an exposure stimulus and an exposure receptor. The exposure stimulus may be a process, material entity or condition (for example, lack of nutrients). The exposure receptor can be an organism, organism population or a part of an organism.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,RO:0002310,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ecto.owl,,,,,,,,,exposure event or process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A process occurring within or in the vicinity of an organism that exerts some causal influence on the organism via the interaction between an exposure stimulus and an exposure receptor. The exposure stimulus may be a process, material entity or condition (for example, lack of nutrients). The exposure receptor can be an organism, organism population or a part of an organism.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00004483,pork primal cut,,A cut of meat that is initially separated from the carcass of a pork during butchering.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00004483,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pork primal cut,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A cut of meat that is initially separated from the carcass of a pork during butchering.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002046,obsolete: agar dilution evidence,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002046,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: agar dilution evidence,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/NCIT_C85555,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001973,library strategy,,Sequencing technique intended for this library.,FALSE,,,,,,,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/books/NBK54984/table/SRA_Glossary_BK.T._library_descriptor_te/?report=objectonly,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001973,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,library strategy,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,Sequencing technique intended for this library.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_36914,inorganic ion,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:36914,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,inorganic ion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C49237,Chemistry Test,Chemistry Test|Chemistry Technique|Chemistry Procedure|Chemistry Measurement,A laboratory test designed for the quantification of an organic or inorganic chemical within a biological specimen.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Chemistry Test|Chemistry Technique|Chemistry Procedure|Chemistry Measurement,,,,NCIT:C49237,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Chemistry Test,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A laboratory test designed for the quantification of an organic or inorganic chemical within a biological specimen.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C93582,Job Title,jobTitle|Job Title,A local name for an individual's occupation.,FALSE,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,jobTitle|Job Title,,,,NCIT:C93582,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Job Title,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A local name for an individual's occupation.,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_54736,Salmonella bongori,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,Salmonella bongori,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:54736,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Salmonella bongori,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C37987,Alive,alive|Living|Live|Alive|ALIVE,Showing characteristics of life; displaying signs of life.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,alive|Living|Live|Alive|ALIVE,,,,NCIT:C37987,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Alive,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Showing characteristics of life; displaying signs of life.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03000386,turkey breast (bone-in),,A turkey breast that has the bone attached to it.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03000386,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,turkey breast (bone-in),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A turkey breast that has the bone attached to it.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0000070,assay,,A planned process that has the objective to produce information about a material entity (the evaluant) by examining it.,FALSE,,,,,,,scientific observation|measuring,,,,,,,,,,,,,,OBI branch derived,,,,"Discussion on OBI call 2023-05-01 resulted in an agreement to revise the textual definition of 'assay'.  https://github.com/obi-ontology/obi/issues/1683.|12/3/12: BP: the reference to the 'physical examination' is included to point out that a prediction is not an assay, as that does not require physical examiniation.",assay,,Assay the wavelength of light emitted by excited Neon atoms. Count of geese flying over a house.,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0000070,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,assay,,,,,,,,,,,,,,,,,,,,,,,,,,,,PlanAndPlannedProcess Branch,,,,A planned process that has the objective to produce information about a material entity (the evaluant) by examining it.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000154,draft WGS lab sequencing quality metrics record,,A data specification which records the sequencing quality datum of a draft whole genome sequencing product.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000154,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,draft WGS lab sequencing quality metrics record,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A data specification which records the sequencing quality datum of a draft whole genome sequencing product.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0100281,Chronic colitis,,"A chronic inflammatory disease of the large intestine (colon, cecum and rectum).",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0267375|SNOMEDCT_US:54597004,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0100281,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Chronic colitis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A chronic inflammatory disease of the large intestine (colon, cecum and rectum).",,,,,,,,
http://purl.obolibrary.org/obo/HP_0100280,Crohn's disease,Morbus Crohn|Granulomatous enteritis and colitis,"A chronic granulomatous inflammatory disease of the intestines that may affect any part of the gastrointestinal tract from mouth to anus, causing a wide variety of symptoms. It primarily causes abdominal pain, diarrhea which may be bloody, vomiting, or weight loss, but may also cause complications outside of the gastrointestinal tract such as skin rashes, arthritis, inflammation of the eye, tiredness, and lack of concentration. Crohn's disease is thought to be an autoimmune disease, in which the body's immune system attacks the gastrointestinal tract, causing inflammation.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0010346|SNOMEDCT_US:34000006,,,,,,,,,,,,,,,,,,,,,,,,,Morbus Crohn|Granulomatous enteritis and colitis,,,,HP:0100280,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Crohn's disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A chronic granulomatous inflammatory disease of the intestines that may affect any part of the gastrointestinal tract from mouth to anus, causing a wide variety of symptoms. It primarily causes abdominal pain, diarrhea which may be bloody, vomiting, or weight loss, but may also cause complications outside of the gastrointestinal tract such as skin rashes, arthritis, inflammation of the eye, tiredness, and lack of concentration. Crohn's disease is thought to be an autoimmune disease, in which the body's immune system attacks the gastrointestinal tract, causing inflammation.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001841,fair health status,,"Fair - Vital signs are stable and within normal limits. Patient is conscious, but may be uncomfortable. Indicators are favorable.",FALSE,,,,,http://purl.obolibrary.org/obo/GENEPIO_0001669,,,,http://purl.obolibrary.org/obo/GENEPIO_0002023,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000120,http://purl.obolibrary.org/obo/GENEPIO_0001845,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001841,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,fair health status,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"Fair - Vital signs are stable and within normal limits. Patient is conscious, but may be uncomfortable. Indicators are favorable.",,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01001002,animal-associated environment,animal environment,An environmental system determined by an animal.,FALSE,,,,,,,Animal,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,animal environment,Metazoan-associated environment,,,,ENVO:01001002,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,envoOmics|envoMeo|envoEmpo,,,,,,,,animal-associated environment,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental system determined by an animal.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490205,leaf wrapper,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0205,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490205,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,leaf wrapper,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100128,Illumina NextSeq 550,,"A DNA sequencer which is a desktop sequencer ideal for smaller-scale studies manufactured by the Illumina corporation. It supports sequencing of single, long or short insert paired end clone libraries relying on sequencing by synthesis technology. The 550 is an upgrade on the 500 model.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100128,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,Illumina NextSeq 550,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A DNA sequencer which is a desktop sequencer ideal for smaller-scale studies manufactured by the Illumina corporation. It supports sequencing of single, long or short insert paired end clone libraries relying on sequencing by synthesis technology. The 550 is an upgrade on the 500 model.",,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00004040,"populated place, Alaska",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00004040,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Alaska",http://purl.obolibrary.org/obo/GAZ_00002521,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_13921,bacterial esophagitis,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:13921,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,bacterial esophagitis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ARO_3004431,EUCAST antimicrobial phenotype,,Qualitative description of a microbial response to antimicrobial agents as described by EUCAST using breakpoints determined through in-vitro testing.  These breakpoints are determined irrespective of tissue specificity of infection.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ARO:3004431,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/aro.owl,,,,,,,,,EUCAST antimicrobial phenotype,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Qualitative description of a microbial response to antimicrobial agents as described by EUCAST using breakpoints determined through in-vitro testing.  These breakpoints are determined irrespective of tissue specificity of infection.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100867,varskip-vss2a strategy,VarSkip 2a,An amplicon strategy which targets SARS-CoV-2 and was developed by New England BioLabs using PrimalSeq to reduce effects of variants with the attributes of version 2a.,FALSE,,,,,,,varskip-vss2a|varskip vss2a,,,,,,,,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,VarSkip 2a,,,,GENEPIO:0100867,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2026-04-13T19:52:38.515Z,,,,,,,,,,,,,,,,,,,varskip-vss2a strategy,,,,,,,,,,,,,,,,,,,,,,https://github.com/nebiolabs/VarSkip,,,,,,,,,,An amplicon strategy which targets SARS-CoV-2 and was developed by New England BioLabs using PrimalSeq to reduce effects of variants with the attributes of version 2a.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_599928,moxalactam,,A broad-spectrum oxacephem antibiotic in which the oxazine ring is substituted with a tetrazolylthiomethyl group and the azetidinone ring carries methoxy and 2-carboxy-2-(4-hydroxyphenyl)acetamido substituents.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:7006|CHEBI:44113|CHEBI:214506,,,,,,CHEBI:599928,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,moxalactam,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A broad-spectrum oxacephem antibiotic in which the oxazine ring is substituted with a tetrazolylthiomethyl group and the azetidinone ring carries methoxy and 2-carboxy-2-(4-hydroxyphenyl)acetamido substituents.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100300,health signs and symptoms enumeration,,A data enumeration which references a set of named signs and symptoms entities.,FALSE,,,,,,,signs and symptoms,,,,,,,,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100300,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,health signs and symptoms enumeration,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data enumeration which references a set of named signs and symptoms entities.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_33285,heteroorganic entity,,A heteroorganic entity is an organic molecular entity in which carbon atoms or organic groups are bonded directly to one or more heteroatoms.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:33285,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,heteroorganic entity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A heteroorganic entity is an organic molecular entity in which carbon atoms or organic groups are bonded directly to one or more heteroatoms.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03480029,packed in vinegar,,Vinegar which is used as a packing medium for food material.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=K0029,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03480029,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,packed in vinegar,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Vinegar which is used as a packing medium for food material.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0031137,Storage in hepatocytes,,Hepatocytes (liver parenchymal cells) exhibit a bloated appearance because of expansion of the cytoplasm by accumulated material.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0031137,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Storage in hepatocytes,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Hepatocytes (liver parenchymal cells) exhibit a bloated appearance because of expansion of the cytoplasm by accumulated material.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_63598,levofloxacin,,An optically active form of ofloxacin having (<i>S</i>)-configuration; an inhibitor of bacterial topoisomerase IV and DNA gyrase.,FALSE,,,,,,,Lfx,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:6440,,,,,,CHEBI:63598,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,levofloxacin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An optically active form of ofloxacin having (<i>S</i>)-configuration; an inhibitor of bacterial topoisomerase IV and DNA gyrase.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020542,"piece of turkey breast (with skin, raw)",,A raw piece of turkey breast that contains skin.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020542,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"piece of turkey breast (with skin, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw piece of turkey breast that contains skin.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_3508,ceftazidime,,"A third-generation cephalosporin antibiotic bearing pyridinium-1-ylmethyl and {[(2<i>Z</i>)-2-(2-amino-1,3-thiazol-4-yl)-2-{[(2-carboxypropan-2-yl)oxy]imino}acetamido groups at positions 3 and 7, respectively, of the cephem skeleton.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:3508,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,ceftazidime,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A third-generation cephalosporin antibiotic bearing pyridinium-1-ylmethyl and {[(2<i>Z</i>)-2-(2-amino-1,3-thiazol-4-yl)-2-{[(2-carboxypropan-2-yl)oxy]imino}acetamido groups at positions 3 and 7, respectively, of the cephem skeleton.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_3506,cefprozil,,"A semisynthetic, second-generation cephalosporin, with prop-1-enyl and (<i>R</i>)-2-amino-2-(4-hydroxyphenyl)acetamido groups at positions 3 and 7, respectively, of the cephem skeleton. It is used to treat bronchitis as well as ear, skin and other bacterial infections.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:3506,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,cefprozil,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A semisynthetic, second-generation cephalosporin, with prop-1-enyl and (<i>R</i>)-2-amino-2-(4-hydroxyphenyl)acetamido groups at positions 3 and 7, respectively, of the cephem skeleton. It is used to treat bronchitis as well as ear, skin and other bacterial infections.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_3504,cefpodoxime,,"A third-generation cephalosporin antibiotic with methoxymethyl and (2Z)-2-(2-amino-1,3-thiazol-4-yl)-2-(methoxyimino)acetamino substituents at positions 3 and 7, respectively, of the cephem skeleton. Given by mouth as its proxetil ester prodrug, it is used to treat acute otitis media, pharyngitis, and sinusitis.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:606443,,,,,,CHEBI:3504,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,cefpodoxime,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A third-generation cephalosporin antibiotic with methoxymethyl and (2Z)-2-(2-amino-1,3-thiazol-4-yl)-2-(methoxyimino)acetamino substituents at positions 3 and 7, respectively, of the cephem skeleton. Given by mouth as its proxetil ester prodrug, it is used to treat acute otitis media, pharyngitis, and sinusitis.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001834,LTER,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001834,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,LTER,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C85697,Macro Broth Dilution Method,Macro Broth Dilution Method|MACRO BROTH DILUTION,A method to determine the minimum inhibitory concentration (MIC) of antibiotics in which growth media is pipetted into a test tube. Each tube contains a known concentration of drug and is inoculated with a known quantity of bacteria. The tubes are incubated for a specified period of time and each is assessed for bacterial cell growth. The drug concentration in the first tube showing no growth is known as the MIC for that antibiotic.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Macro Broth Dilution Method|MACRO BROTH DILUTION,,,,NCIT:C85697,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Macro Broth Dilution Method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A method to determine the minimum inhibitory concentration (MIC) of antibiotics in which growth media is pipetted into a test tube. Each tube contains a known concentration of drug and is inoculated with a known quantity of bacteria. The tubes are incubated for a specified period of time and each is assessed for bacterial cell growth. The drug concentration in the first tube showing no growth is known as the MIC for that antibiotic.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C16119,Antiviral Therapy,"treatment of viral infectious disease|Treatment of Infectious Diseases, Viral|Infectious Diseases / Treatment, Viral|Antiviral Therapy",Treatment of viral infections with agents that prevent viral replication in infected cells without impairing the host cell function.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"treatment of viral infectious disease|Treatment of Infectious Diseases, Viral|Infectious Diseases / Treatment, Viral|Antiviral Therapy",,,,NCIT:C16119,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Antiviral Therapy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Treatment of viral infections with agents that prevent viral replication in infected cells without impairing the host cell function.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_36342,subatomic particle,,A particle smaller than an atom.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:36342,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/cob.owl,,,,,,,,,subatomic particle,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A particle smaller than an atom.,,,,,,,,
http://purl.obolibrary.org/obo/EO_0007037,EO_0007037,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,EO:0007037,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/EO_0007036,EO_0007036,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,EO:0007036,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/EO_0007033,EO_0007033,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,EO:0007033,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/EO_0007035,EO_0007035,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,EO:0007035,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/EO_0007034,EO_0007034,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,EO:0007034,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/EO_0007038,EO_0007038,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,EO:0007038,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02021031,buffalo sub-primal cut (raw),,A raw buffalo sub-primal cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02021031,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,buffalo sub-primal cut (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw buffalo sub-primal cut.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100856,artic-v5.3.2_400 strategy,,An amplicon strategy which was developed by the ARTIC consortium for SARS-CoV-2 with the attributes of version 5.3.2 which produces amplicons approximately 400bp in length.,FALSE,,,,,,,artic-v5.3.2_400|artic v5.3.2_400,,,,,,,,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100856,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2026-04-13T19:52:38.515Z,,,,,,,,,,,,,,,,,,,artic-v5.3.2_400 strategy,,,,,,,,,,,,,,,,,,,,,,https://community.artic.network/t/sars-cov-2-version-5-3-2-scheme-release/462,,,,,,,,,,An amplicon strategy which was developed by the ARTIC consortium for SARS-CoV-2 with the attributes of version 5.3.2 which produces amplicons approximately 400bp in length.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000069,sequencing run date,,Date the sequencing run was performed,FALSE,,,,,http://purl.obolibrary.org/obo/GENEPIO_0000021,,,,,,,,,,,,,,,,GROUP: IRIDA Ontology (Emma),,,,,,,yyyy/mm/dd,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000069,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,,,,,,,sequencing run date,,,,,Sequencing,,,,,,,,,,,,,,,,,,,,,,Sequencing Run Date,,,NML NGS Archive,,Date the sequencing run was performed,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100301,pre-existing conditions and risk factors enumeration,,A data enumeration which references a set of named pre-existing conditions and risk factors entities.,FALSE,,,,,,,pre-existing conditions and risk factors,,,,,,,,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100301,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,pre-existing conditions and risk factors enumeration,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data enumeration which references a set of named pre-existing conditions and risk factors entities.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020978,"beef roast (boneless, seasoned, fresh frozen)",,"A boneless, seasoned and freshly frozen beef roast.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020978,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"beef roast (boneless, seasoned, fresh frozen)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A boneless, seasoned and freshly frozen beef roast.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001986,MRE-Seq strategy,,Methylation-Sensitive Restriction Enzyme Sequencing strategy.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI SRA: MRE-Seq,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001986,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MRE-Seq strategy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Methylation-Sensitive Restriction Enzyme Sequencing strategy.,,,,,,,,
http://purl.obolibrary.org/obo/ARO_3004399,manual testing platform,noncommercial testing platform,Non-automated system of analysis for determining antimicrobial susceptibility.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,noncommercial testing platform,,,,ARO:3004399,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/aro.owl,,,,,,,,,manual testing platform,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Non-automated system of analysis for determining antimicrobial susceptibility.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000124,"beef strip loin (boneless, raw)",,A raw and boneless beef strip loin.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000124,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"beef strip loin (boneless, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw and boneless beef strip loin.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001988,other library strategy,,Library strategy not listed.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI SRA: OTHER,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001988,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,other library strategy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Library strategy not listed.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490210,"glass container, metal lid",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0210,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490210,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"glass container, metal lid",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001414,most recent travel departure date,most recent travel departure date,A date field which describes the date of an individual's most recent departure from their primary residence (at time of data collection) on a journey to one or more other locations.,FALSE,,,,,,,PCDS:most_recent_travel_departure_date,,,,,,,"PCDS: Provide the travel departure date. Provide the date in ISO 8601 format, i.e. 'YYYY-MM-DD'.",,,,,,,,,,,,,,PCDS: 2020-03-16,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,most recent travel departure date,most recent travel departure date slot,,,,GENEPIO:0001414,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,most recent travel departure date,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A date field which describes the date of an individual's most recent departure from their primary residence (at time of data collection) on a journey to one or more other locations.,,PCDS: The date of a person's most recent departure from their primary residence (at that time) on a journey to one or more other locations.,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000031,beef sirloin tip side roast,,A roast that derives from beef sirloin tip and only consists of M.vastus lateralis.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000031,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef sirloin tip side roast,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A roast that derives from beef sirloin tip and only consists of M.vastus lateralis.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001690,obsolete: matrix - fluid,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001690,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: matrix - fluid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000022,river,braided river,"A stream which, through permanent or seasonal flow processes, moves from elevated land towards lower elevations through a definite channel and empties either into a sea, lake, or another river or ends on land as bed seepage and evapotranspiration exceed water supply.",FALSE,,,,,,,,,,,,,,"""There are no official definitions for the generic term river as applied to geographic features, although in some countries or communities a stream is defined by its size. Many names for small rivers are specific to geographic location; examples are ""run"" in some parts of the United States, ""burn"" in Scotland and northeast England, and ""beck"" in northern England. Sometimes a river is defined as being larger than a creek, but not always: the language is vague.""",,,,,,,,,,,,,,,,,,TGN:21105|SWEETRealm:River|SPIRE:River|LTER:474|FTT:251|FTT:1179|EcoLexicon:river,,,,,,,,,,,,,,,,,,,,,,,,,rio,braided river,,,ENVO:00000022,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,river,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A stream which, through permanent or seasonal flow processes, moves from elevated land towards lower elevations through a definite channel and empties either into a sea, lake, or another river or ends on land as bed seepage and evapotranspiration exceed water supply.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03430133,"divided into halves, quarters or segments",,"Divided into pieces whose shape is defined in relation to the shape of the whole, i.e., halves, quarters, or segments. It is used regardless of the size of the whole.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=E0133,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03430133,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"divided into halves, quarters or segments",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Divided into pieces whose shape is defined in relation to the shape of the whole, i.e., halves, quarters, or segments. It is used regardless of the size of the whole.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03460294,curing or aging 12 months or over,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=H0294,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03460294,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,curing or aging 12 months or over,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00005299,"populated place, Sierra Leone",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00005299,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Sierra Leone",http://purl.obolibrary.org/obo/GAZ_00000914,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001630,contig length QC threshold,,A 'contig length QC threshold' is an integer setting which can be applied by an algorithm to an array of assembly and annotation contig lengths to remove (filter out) all items less than the threshold value.  The reduced array is used for calculation of statistics.,FALSE,,,,,,,,,,,,,,"QUAST specifies which of its report stats are affected by the ""--min-contig"" minimum contig length parameter.",,,,,,,http://quast.bioinf.spbau.ru/manual.html,,,,,contig pre-analysis minimum length QC threshold,,,,,http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001630,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,contig length QC threshold,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A 'contig length QC threshold' is an integer setting which can be applied by an algorithm to an array of assembly and annotation contig lengths to remove (filter out) all items less than the threshold value.  The reduced array is used for calculation of statistics.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C43431,Activity,General activity|Activity,An active process; excludes processes and mechanisms which fulfill biological functions.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,General activity|Activity,,,,NCIT:C43431,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Activity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An active process; excludes processes and mechanisms which fulfill biological functions.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002005,draft tuberculosis - case medication,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002005,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,draft tuberculosis - case medication,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/SO_0000700,remark,,A comment about the sequence.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SO:0000700,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/so.owl,http://purl.oboInOwllibrary.org/oboInOwl/so#SOFA,,,,,,,,remark,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A comment about the sequence.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C25414,Aliquot,Aliquot,"Pertaining to a portion of the whole; any one of two or more samples of something, of the same volume or weight.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Aliquot,,,,NCIT:C25414,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Aliquot,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Pertaining to a portion of the whole; any one of two or more samples of something, of the same volume or weight.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_35504,addition compound,,An addition compound contains two or more simpler compounds that can be packed in a definite ratio into a crystal. The term covers donor-acceptor complexes (adducts) and a variety of lattice compounds.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:35504,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,addition compound,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An addition compound contains two or more simpler compounds that can be packed in a definite ratio into a crystal. The term covers donor-acceptor complexes (adducts) and a variety of lattice compounds.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_827,ureter tuberculosis,,An urogenital tuberculosis that is located_in ureter resulting in ureteral strictures.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:827,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,ureter tuberculosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An urogenital tuberculosis that is located_in ureter resulting in ureteral strictures.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_820,myocarditis,,An extrinsic cardiomyopathy that is characterized as an inflammation of the heart muscle.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:820,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,myocarditis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An extrinsic cardiomyopathy that is characterized as an inflammation of the heart muscle.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001193,obsolete: type of illness,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001193,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: type of illness,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,http://purl.obolibrary.org/obo/DOID_4,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100088,fulminant myocarditis,,"An acute form of myocarditis, whose main characteristic is a rapidly progressive clinical course with the need for hemodynamic support.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100088,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,fulminant myocarditis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An acute form of myocarditis, whose main characteristic is a rapidly progressive clinical course with the need for hemodynamic support.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100264,pharmacist role,,A role inhering in a person that is realized when the bearer is a health professional who specializes in dispensing prescription drugs at a healthcare facility.,FALSE,,,,,,,Pharmacist,,,,,,,,,,,,,,https://en.wiktionary.org/wiki/pharmacist,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100264,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,pharmacist role,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A role inhering in a person that is realized when the bearer is a health professional who specializes in dispensing prescription drugs at a healthcare facility.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C296,Bacterial Toxin,bacterial toxin|Bacterial Toxin,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,bacterial toxin|Bacterial Toxin,,,,NCIT:C296,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Bacterial Toxin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03306544,turkey breast (raw),,A whole raw turkey breast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://bioregistry.io/reference/siren:F6544,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03306544,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,turkey breast (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A whole raw turkey breast.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100744,mollusc shell measurement characterization tag,mollusc shell measurement data type,A physical characterization data tag which indicates the presence of data that describes a measurement of a mollusc shell.,FALSE,,,,,,,mollusc shell measurement,,,,,,,"Example Guidance: Use this tag to indicate additional data is available that provides a measurement of the mollusc shell, including the units of measurement.",,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,mollusc shell measurement data type,,,,GENEPIO:0100744,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-05-18T19:08:34.869Z,,,,,,,,,,,,,,,,,,,mollusc shell measurement characterization tag,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A physical characterization data tag which indicates the presence of data that describes a measurement of a mollusc shell.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0034768,morphological feature,,A part of an organism or organ that is continuous with its surroundings and distinguished from its surroundings based on morphology.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0034768,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,morphological feature,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A part of an organism or organ that is continuous with its surroundings and distinguished from its surroundings based on morphology.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000163,beef tri-tip roast,,A beef roast cut that is triangular shaped and is located at the tip of the sirloin.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000163,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef tri-tip roast,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A beef roast cut that is triangular shaped and is located at the tip of the sirloin.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100476,attribute package,attribute_package|attribute package,A data field which describes the attribute package used to structure metadata in an International Nucleotide Sequence Database Collaboration (INSDC) BioSample.,FALSE,,,,,,,PCDS:attribute_package,,,,,,,"PCDS: If the sample is from a specific human or animal, put 'Pathogen.cl'. If the sample is from an environmental sample including food, feed, production facility, farm, water source, manure etc, put 'Pathogen.env'.",,,,,,,,,,,,,,PCDS: Pathogen.env [GENEPIO:0100581],,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,attribute_package|attribute package,attribute package slot,,,,GENEPIO:0100476,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-12-22T00:55:53.808Z,,,,,,,,,,,,,,,,,,,attribute package,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the attribute package used to structure metadata in an International Nucleotide Sequence Database Collaboration (INSDC) BioSample.,,PCDS: The attribute package used to structure metadata in an INSDC BioSample.,,,,,,
http://purl.obolibrary.org/obo/STATO_0000593,adjusted Rand index,,"the adjusted Rand index is a measure which rescales the Rand index, taking into account that random chance will cause some objects to occupy the same clusters, so the Rand Index will never actually be zero.",FALSE,,,,,,,ARI,,,,,,,,,,,,,,"",,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000593,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,adjusted Rand index,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra,,,,"the adjusted Rand index is a measure which rescales the Rand index, taking into account that random chance will cause some objects to occupy the same clusters, so the Rand Index will never actually be zero.",,,,,,,,
http://purl.obolibrary.org/obo/OBA_2040160,age of onset of Machado-Joseph disease,age at onset of Machado-Joseph disease|age Machado-Joseph disease symptoms begin,The age at which Machado-Joseph disease manifestations first appear.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,age at onset of Machado-Joseph disease|age Machado-Joseph disease symptoms begin,,,,OBA:2040160,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age of onset of Machado-Joseph disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The age at which Machado-Joseph disease manifestations first appear.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0012443,Abnormal brain morphology,Abnormality of the brain|Abnormality of brain morphology|Abnormal shape of brain,"A structural abnormality of the brain, which has as its parts the forebrain, midbrain, and hindbrain.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4021085,,,,,,,,,,,,,,,,,,,,,,,,,Abnormality of the brain|Abnormality of brain morphology|Abnormal shape of brain,,,,HP:0012443,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal brain morphology,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A structural abnormality of the brain, which has as its parts the forebrain, midbrain, and hindbrain.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_50860,organic molecular entity,,Any molecular entity that contains carbon.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:33244|CHEBI:25700,,,,,,CHEBI:50860,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,organic molecular entity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any molecular entity that contains carbon.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001010,Canadian Integrated Public Health Information System (iPHIS) Standard,,The Canadian Integrated Public Health Information System (iPHIS) System provides a standard for holding reportable disease cases from participating jurisdictions.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001010,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Canadian Integrated Public Health Information System (iPHIS) Standard,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,The Canadian Integrated Public Health Information System (iPHIS) System provides a standard for holding reportable disease cases from participating jurisdictions.,,,,iPHIS standard,,,,
http://purl.obolibrary.org/obo/FOODON_03510180,reduced saturated fat food,,Food containing at least 25% less saturated fat per amount customarily consumed than the saturated fat content of a comparable food product. The comparable food product may not be 'low saturated fat'.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0180,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510180,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,reduced saturated fat food,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Food containing at least 25% less saturated fat per amount customarily consumed than the saturated fat content of a comparable food product. The comparable food product may not be 'low saturated fat'.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_3342,bone inflammation disease,,A bone disease that results_in inflammation of the located_in bone.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:3342,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,bone inflammation disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A bone disease that results_in inflammation of the located_in bone.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0101113,influenza antiviral treatment administration,,,FALSE,,,,,,,PCDS:influenza_antiviral_treatment_administration,,,,,,,,,,,,,,,,,,,,,PCDS: Influenza antiviral treatment administered [GENEPIO:0101194],,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0101113,,,,,,,,,,,,,,2026-04-13T17:16:47.336Z,,,,,,,,,,,,,,,,,,,influenza antiviral treatment administration,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PCDS: An action of giving or applying an influenza antiviral agent to a patient as part of a treatment regimen.,,,,,,
http://www.ebi.ac.uk/efo/EFO_0004951,alive at endpoint,,A clinical temporal measurement indicating that the subject is alive at the end of the clinical investigation.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,efo:EFO_0004951,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,alive at endpoint,,,,,,,,,,,,,,,,,,,,,,,,,,,,Helen Parkinson,,,,A clinical temporal measurement indicating that the subject is alive at the end of the clinical investigation.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0025155,Abnormal hepatobiliary system physiology,,A functional anomaly of the hepatobiliary system,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0025155,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal hepatobiliary system physiology,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A functional anomaly of the hepatobiliary system,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_383703,"3,6-diamino-10-methylacridinium chloride",,"The 10-methochloride salt of 3,6-diaminoacridine. Note that a mixture of this compound with 3,6-diaminoacridine (proflavine) is known as acriflavine or neutral acriflavine.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:383703,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,"3,6-diamino-10-methylacridinium chloride",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The 10-methochloride salt of 3,6-diaminoacridine. Note that a mixture of this compound with 3,6-diaminoacridine (proflavine) is known as acriflavine or neutral acriflavine.",,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0354,Canadian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0354,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Canadian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0353,Bulgarian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0353,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Bulgarian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0355,Channel Islander,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0355,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Channel Islander,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0358,Czech,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0358,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Czech,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0351,Bosnian or Herzegovinian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0351,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Bosnian or Herzegovinian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0352,Brazilian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0352,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Brazilian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0356,Chilean,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0356,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Chilean,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0350,Bermudian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0350,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Bermudian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0357,Croatian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0357,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Croatian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0359,Danish,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0359,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Danish,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HP_0034644,Abnormal liver metabolite concentration,,The concentration of a metabolite in the liver is above or below the limits of normal.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0034644,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal liver metabolite concentration,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The concentration of a metabolite in the liver is above or below the limits of normal.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100309,sampling location latitude,geographical location latitude,A data field which describes the latitude coordinates of the geographical location of sample collection.,FALSE,,,,,,,PCDS:geo_loc_latitude,,,,,,,"PCDS: Provide latitude coordinates if available. Do not use the centre of the city/region/province/state/country or the location of your agency as a proxy, as this implicates a real location and is misleading. Specify as degrees latitude in format 'd[d.dddd] N|S'.",,,,,,,,,,,,,,PCDS: 38.98 N,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,geographical location latitude,sample collection location latitude,,,,GENEPIO:0100309,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,sampling location latitude,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the latitude coordinates of the geographical location of sample collection.,,PCDS: The latitude coordinates of the geographical location of sample collection.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100210,pharmacy exposure process,,A process occuring within or in the vicinity of a pharmacy that exposes the recipient organism to a material entity.,FALSE,,,,,,,Pharmacy,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100210,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,pharmacy exposure process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A process occuring within or in the vicinity of a pharmacy that exposes the recipient organism to a material entity.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001965,library source,,The library source specifies the type of source material that is being sequenced.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001965,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,library source,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,https://www.ncbi.nlm.nih.gov/books/NBK54984/table/SRA_Glossary_BK.T._library_descriptor_te/?report=objectonly,,The library source specifies the type of source material that is being sequenced.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001115,genome material from specimen,,,FALSE,,,,,,,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/books/NBK54364/,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001115,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/SO_0001026,,,,,,genome material from specimen,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,genome material,,,,
http://purl.obolibrary.org/obo/FOODON_02020889,cow material,,Material that derives from some cow.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020889,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,cow material,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Material that derives from some cow.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001093,smoking status,,"",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001093,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,smoking status,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002027,obsolete: ordinal variable,,"An ordinal variable is a categorical variable whose values have sequential order, but no distance metric between them.",TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002027,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: ordinal variable,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,http://purl.obolibrary.org/obo/STATO_0000228,,,"An ordinal variable is a categorical variable whose values have sequential order, but no distance metric between them.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_35552,heterocyclic organic fundamental parent,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:35552,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,heterocyclic organic fundamental parent,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001427,health care personal identifier,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001427,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,health care personal identifier,,,,,,,,,,,,,,,,,,,,,,,,,,,,identifier of a person with the context of a health care system|Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03311737,processed food,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://bioregistry.io/reference/siren:F11737,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03311737,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,processed food,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C41275,Vial,Vial|Phial,"A small, often stoppered glass or plastic bottle for holding fluids.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Vial|Phial,,,,NCIT:C41275,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Vial,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A small, often stoppered glass or plastic bottle for holding fluids.",,,,,,,,
http://purl.obolibrary.org/obo/UO_0000045,base unit,,A unit which is one of a particular measure to which all measures of that type can be related.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:0000045,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,base unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A unit which is one of a particular measure to which all measures of that type can be related.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002161,"region, province, state or territory specification",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002161,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"region, province, state or territory specification",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00003194,"populated place, Chad",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00003194,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Chad",http://purl.obolibrary.org/obo/GAZ_00000586,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00003198,Province (China),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00003198,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Province (China),http://purl.obolibrary.org/obo/GAZ_00002845,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00003199,Municipality (China),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00003199,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Municipality (China),http://purl.obolibrary.org/obo/GAZ_00002845,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00003192,"populated place, Hawaii",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00003192,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Hawaii",http://purl.obolibrary.org/obo/GAZ_00003939,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001576,evolution modelling relevance,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001576,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,evolution modelling relevance,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00010408,"populated place, Peru",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00010408,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Peru",http://purl.obolibrary.org/obo/GAZ_00002932,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001228,obsolete: food preservation method,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001228,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: food preservation method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/FOODON_03470107,,,,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0001891,sequencing facility organization,,An organization that provides sequence determination service,FALSE,,,,,,,,,,,,,,,,,,,,,NIAID GSCID-BRC metadata working group,,,,,sequencing facility organization,,,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0001891,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,sequencing facility organization,,,,,,,Sequencing Facility,,,,,,,,,,,,,,,,,,,,,"PERSON: Chris Stoeckert, Jie Zheng",,,,An organization that provides sequence determination service,,,,sequencing facility,,,,
http://purl.obolibrary.org/obo/DOID_9470,bacterial meningitis,,A meningitis that has_material_basis_in a bacterial infection.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:9470,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,bacterial meningitis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A meningitis that has_material_basis_in a bacterial infection.,,,,,,,,
http://purl.bioontology.org/ontology/MESH/D057805,animal - pet,,"Animals kept by humans for companionship and enjoyment, as opposed to DOMESTIC ANIMALS such as livestock or farm animals, which are kept for economic reasons.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,D057805,,,,,,,,,,,,,,,,,,,,,,,,http://purl.bioontology.org/ontology/MESH,,,,,,,,,animal - pet,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Animals kept by humans for companionship and enjoyment, as opposed to DOMESTIC ANIMALS such as livestock or farm animals, which are kept for economic reasons.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_26513,quinolines,,A class of aromatic heterocyclic compounds each of which contains a benzene ring <em>ortho</em> fused to carbons 2 and 3 of a pyridine ring.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:26513,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,quinolines,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A class of aromatic heterocyclic compounds each of which contains a benzene ring <em>ortho</em> fused to carbons 2 and 3 of a pyridine ring.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02010113,piece of animal meat (boneless),,A piece of boneless animal meat.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02010113,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of animal meat (boneless),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A piece of boneless animal meat.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C15346,Vaccination,vaccination|Vaccination,Administration of vaccines to stimulate the host's immune response. This includes any preparation intended for active immunological prophylaxis or treatment.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,vaccination|Vaccination,,,,NCIT:C15346,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Vaccination,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Administration of vaccines to stimulate the host's immune response. This includes any preparation intended for active immunological prophylaxis or treatment.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0002048,lung,pulmo,Respiration organ that develops as an outpocketing of the esophagus.,FALSE,,,,,,,,,,,,,,"Snakes and limbless lizards typically possess only the right lung as a major respiratory organ; the left lung is greatly reduced, or even absent. Amphisbaenians, however, have the opposite arrangement, with a major left lung, and a reduced or absent right lung [WP]",,,,,,,,,,,,,,,,,,galen:Lung|XAO:0000119|Wikipedia:Lung|UMLS:C0024109|SCTID:181216001|NCIT:C12468|MIAA:0000135|MESH:D008168|MAT:0000135|MA:0000415|GAID:345|FMA:7195|EV:0100042|EMAPA:16728|EHDAA:2205|EHDAA:1554|EHDAA2:0001042|EFO:0000934|CALOHA:TS-0568|BTO:0000763|AAO:0010567|AAO:0000275,,,,,,,,,,,,,,,,,,,,,,,,,pulmo,,,,UBERON:0002048,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,lung,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Respiration organ that develops as an outpocketing of the esophagus.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100093,muscle injury,,"An injury in muscle tissue caused by bruising, spraining or laceration.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100093,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,muscle injury,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An injury in muscle tissue caused by bruising, spraining or laceration.",,,,,,,,
http://purl.obolibrary.org/obo/MONDO_7770010,disease of primarily extrinsic mechanism,,"A grouping class for human diseases caused primarily by extrinsic factors, including infections, toxins, nutritional deficiencies, iatrogenic causes, and environmental exposures.",FALSE,,,,,,,,,,,,,,This term is intended solely for classification purposes and should not be used for direct data annotation.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MONDO:7770010,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,,,,,,,,,disease of primarily extrinsic mechanism,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A grouping class for human diseases caused primarily by extrinsic factors, including infections, toxins, nutritional deficiencies, iatrogenic causes, and environmental exposures.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C47955,Means,Means,A way of doing something; how a result is obtained or an end is achieved.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Means,,,,NCIT:C47955,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Means,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A way of doing something; how a result is obtained or an end is achieved.,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0004335,digestive system disorder,stomach or intestinal disorder|gastrointestinal system disorder|gastrointestinal system disease|gastrointestinal disorder|gastroenterological system disorder|gastroenterological system disease|disorder of digestive system|disease or disorder of digestive system|disease of digestive system|digestive system disorder|digestive system disease or disorder|digestive system disease|digestive disease,A disease or disorder that involves the digestive system.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,icd11.foundation:1256772020|UMLS:C4023588|SCTID:53619000|NCIT:C2990|NANDO:1100013|MESH:D005767|MEDGEN:892790|ICD9:V47.3|ICD9:520-579|ICD10CM:K00-K95|DOID:77,,,,,,,,,,,,,,,,,,,,,,,,,stomach or intestinal disorder|gastrointestinal system disorder|gastrointestinal system disease|gastrointestinal disorder|gastroenterological system disorder|gastroenterological system disease|disorder of digestive system|disease or disorder of digestive system|disease of digestive system|digestive system disorder|digestive system disease or disorder|digestive system disease|digestive disease,,,,MONDO:0004335,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#rare_grouping|http://purl.oboInOwllibrary.org/oboInOwl/mondo#harrisons_view,,,,,,,,digestive system disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A disease or disorder that involves the digestive system.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000988,ethnic food shop,ethnic speciality store|ethnic speciality shop|ethnic food store,A food shop in which the food products on offer are restricted to those produced in a region and cultural setting other than that of the shop's locality.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ethnic speciality store|ethnic speciality shop|ethnic food store,,,,ENVO:01000988,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,ethnic food shop,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A food shop in which the food products on offer are restricted to those produced in a region and cultural setting other than that of the shop's locality.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02010110,"piece of animal meat (skinless, raw)",,A raw piece of skinless animal meat.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02010110,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"piece of animal meat (skinless, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw piece of skinless animal meat.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0101106,diagnostic testing details,,,FALSE,,,,,,,PCDS:diagnostic_testing_details,,,,,,,,,,,,,,,,,,,,,,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0101106,,,,,,,,,,,,,,2026-04-13T17:16:47.336Z,,,,,,,,,,,,,,,,,,,diagnostic testing details,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PCDS: Describe any details of the diagnsotic testing.,,,,,,
http://purl.obolibrary.org/obo/CHEBI_26188,polyketide,,"Natural and synthetic compounds containing alternating carbonyl and methylene groups ('β-polyketones'), biogenetically derived from repeated condensation of acetyl coenzyme A (via malonyl coenzyme A), and usually the compounds derived from them by further condensations, etc. Considered by many to be synonymous with the less frequently used terms acetogenins and ketides.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:26188,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,polyketide,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Natural and synthetic compounds containing alternating carbonyl and methylene groups ('β-polyketones'), biogenetically derived from repeated condensation of acetyl coenzyme A (via malonyl coenzyme A), and usually the compounds derived from them by further condensations, etc. Considered by many to be synonymous with the less frequently used terms acetogenins and ketides.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100470,sequenced by laboratory name,sequenced by laboratory name,A data field which describes the specific laboratory affiliation of those responsible for sequencing the isolate's genome.,FALSE,,,,,,,PCDS:sequenced_by_laboratory_name,,,,,,,"PCDS: Provide the name of the specific laboratory that that performed the sequencing in full (avoid abbreviations). If the information is unknown or cannot be provided, leave blank or provide a null value.",,,,,,,,,,,,,,PCDS: Topp Lab,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,sequenced by laboratory name,sequenced by laboratory name slot,,,,GENEPIO:0100470,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,sequenced by laboratory name,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the specific laboratory affiliation of those responsible for sequencing the isolate's genome.,,PCDS: The specific laboratory affiliation of the responsible for sequencing the isolate's genome.,,,,,,
http://purl.obolibrary.org/obo/OBI_0600047,sequencing assay,,An assay the uses chemical or biochemical means to infer the sequence of a biomaterial,FALSE,,,,,,,,,,,,,,,,,,,,,OBI branch derived,,,,,sequencing assay,,The use of the Sanger method of DNA sequencing to determine the order of the nucleotides in a DNA template,,,http://purl.obolibrary.org/obo/IAO_0000125,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0600047,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,sequencing assay,,,,,,,,,,,,,,,,,,,,,,,,,,,,PlanAndPlannedProcess Branch,,,,An assay the uses chemical or biochemical means to infer the sequence of a biomaterial,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001266,biomaterial extracted,biomaterial extracted,A data field which describes the biomaterial extracted from samples for the purpose of sequencing.,FALSE,,,,,,,PCDS:biomaterial_extracted,,,,,,,PCDS: Provide the biomaterial extracted from the picklist in the template.,,,,,,,,,,,,,,PCDS: RNA (total),,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,biomaterial extracted,biomaterial extracted slot,,,,GENEPIO:0001266,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,biomaterial extracted,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the biomaterial extracted from samples for the purpose of sequencing.,,PCDS: The biomaterial extracted from samples for the purpose of sequencing.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001031,obsolete: wedding,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001031,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: wedding,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/PCO_0000038,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0004802,respiratory tract epithelium,respiratory tract epithelial tissue|epithelium of respiratory tract|epithelial tissue of respiratory tract,"The pseudostratified ciliated epithelium that lines much of the conducting portion of the airway, including part of the nasal cavity and larynx, the trachea, and bronchi.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SCTID:321764001|MA:0001480|EMAPA:32827|CALOHA:TS-0023|BTO:0000419,,,,,,,,,,,,,,,,,,,,,,,,,respiratory tract epithelial tissue|epithelium of respiratory tract|epithelial tissue of respiratory tract,,,,UBERON:0004802,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,respiratory tract epithelium,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The pseudostratified ciliated epithelium that lines much of the conducting portion of the airway, including part of the nasal cavity and larynx, the trachea, and bronchi.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0004807,respiratory system epithelium,respiratory system epithelial tissue|epithelium of respiratory system|epithelium of apparatus respiratorius|epithelial tissue of respiratory system|epithelial tissue of apparatus respiratorius|apparatus respiratorius epithelium|apparatus respiratorius epithelial tissue,An epithelium that is part of a respiratory system [Automatically generated definition].,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MA:0001823|EMAPA:32826|CALOHA:TS-0023,,,,,,,,,,,,,,,,,,,,,,,,,respiratory system epithelial tissue|epithelium of respiratory system|epithelium of apparatus respiratorius|epithelial tissue of respiratory system|epithelial tissue of apparatus respiratorius|apparatus respiratorius epithelium|apparatus respiratorius epithelial tissue,,,,UBERON:0004807,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,respiratory system epithelium,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An epithelium that is part of a respiratory system [Automatically generated definition].,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000106,beef chuck steak (raw),,A raw beef chuck steak.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000106,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef chuck steak (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef chuck steak.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001502,lineage clade analysis software version,lineage/clade analysis software version,A data field which describes the version of the software used to determine the lineage/clade.,FALSE,,,,,,,PCDS:lineage_clade_analysis_software_version,,,,,,,PCDS: Provide the version of the software used ot determine the lineage/clade.,,,,,,,,,,,,,,PCDS: 1.5.0,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,lineage/clade analysis software version,lineage/clade analysis software version slot|lineage or clade analysis software version slot|lineage or clade analysis software version field,,,,GENEPIO:0001502,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,lineage clade analysis software version,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the version of the software used to determine the lineage/clade.,,PCDS: The version of the software used to determine the lineage/clade.,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000418,human house,,A human house is a house which provides a dwelling-place for humans.,FALSE,,,,,,,,,,,,,,A human house is a house which provides a dwelling-place for humans.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01000418,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,human house,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001395,host gender,host gender,A host data field which describes the gender of the host at the time of sample collection.,FALSE,,,,,,,PCDS:host_gender,,,,,,,"PCDS: If known, select a value from the pick list.",,,,,,,,,,,,,,PCDS: Male,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,host gender,host gender slot,,,,GENEPIO:0001395,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,host gender,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A host data field which describes the gender of the host at the time of sample collection.,,PCDS: The gender of the host at the time of sample collection.,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470144,artificial heat drying,,Drying by the application of artificial heat.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0144,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470144,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,artificial heat drying,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Drying by the application of artificial heat.,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_1783272,Bacillati,,,FALSE,,,,,,,Terrabacteria group,,,,,,,,,,,,,,,,,,,Bacillati,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:1783272,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Bacillati,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100051,subject age at time of specimen collection bin (20 - 29),,An age group that stratifies the age of a case to be between 20 to 29 years old (inclusive).,FALSE,,,,,,,20 - 29,,,,,,,,,,,,,,,,,,,,,,,,ready for release,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100051,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,subject age at time of specimen collection bin (20 - 29),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An age group that stratifies the age of a case to be between 20 to 29 years old (inclusive).,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_78840,olefinic compound,,Any organic molecular entity that contains at least one C=C bond.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:78840,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,olefinic compound,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any organic molecular entity that contains at least one C=C bond.,,,,,,,,
http://purl.obolibrary.org/obo/OMIT_0016142,Bacterial Typing Techniques,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OMIT:0016142,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/omit.owl,,,,,,,,,Bacterial Typing Techniques,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510167,no water added claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0167,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510167,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,no water added claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490419,boil-in bag,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0419,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490419,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,boil-in bag,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0005052,gizzard,gigerium|gastric mill,The muscular enlargement of the alimentary canal that has usually thick muscular walls and a tough horny lining for grinding the food and when the crop is present follows it and the proventriculus.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Gizzard|UMLS:C1510668|NCIT:C77615|MESH:D005895|GAID:1238|BTO:0000520,,,,,,,,,,,,,,,,,,,,,,,,,gigerium|gastric mill,,,,UBERON:0005052,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,gizzard,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The muscular enlargement of the alimentary canal that has usually thick muscular walls and a tough horny lining for grinding the food and when the crop is present follows it and the proventriculus.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0005057,immune organ,immune system organ,An organ that is part of a immune system [Automatically generated definition].,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,immune system organ,,,,UBERON:0005057,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,immune organ,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An organ that is part of a immune system [Automatically generated definition].,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510103,sweetener-related claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0103,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510103,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,sweetener-related claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03480033,"packed in gravy or sauce, dairy or egg component",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=K0033,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03480033,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"packed in gravy or sauce, dairy or egg component",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03450007,charcoal broiling,,Cooked without moisture over direct heat from a charcoal fire.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=G0007,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03450007,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,charcoal broiling,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Cooked without moisture over direct heat from a charcoal fire.,,,,,,,,
http://purl.obolibrary.org/obo/GSSO_000096,transgender,transgender and nonbinary,"Transgender people have a gender identity or gender expression that differs from their assigned sex. In some select cases, transgender people are sometimes called transsexual if they desire medical assistance to transition from one sex to another. ""Transgender"" is also an umbrella term: in addition to including people whose gender identity is the opposite of their assigned sex (trans men and trans women), it may include people who are not exclusively masculine or feminine (people who are genderqueer or non-binary, including bigender, pangender, genderfluid, or agender). Other definitions of transgender also include people who belong to a third gender, or else conceptualize transgender people as a third gender.|Not identifying with culturally conventional gender roles and categories of male or female; having changed gender identity from male to female or female to male, or identifying with elements of both, or having some other gender identity; or, pertaining to such people.|Having a gender (identity) which is different from the sex one was assigned at birth: being assigned male at birth but having a female gender or vice versa; or, pertaining to such people.",FALSE,,,,,,,,,,,,,,"The adjective ""transgender"" should never have an extraneous ""-ed"" attached to it. This is confusing and grammatically unnecessary.|""Transgender"" is an adjective and should not be formed into a collective noun. This terminology is often used by anti-transgender activists aiming to dehumanize transgender people.|""Transgender"" and its derivatives (""transgender male"", ""transgender female"", ""transgender woman"", ""transgender man"", etc.) are generally not considered genders and/or gender identities. Listing ""male"" separate from ""transgender male"" or listing ""transgender"" separate from ""male""/""female"" is transphobic in the sense that it denies a transgender person's gender, forcing them to choose in an unclear situation, and implies that they are somehow deviant from ""normal"" maleness/femaleness. A few transgender persons still utilize these terms in identifying, however, but an ""other (please specify)"" option is much more functional in this regard (as well as a ""select all that apply"" for gender/gender identity).",,,,,,,,,,,,,,,,,,https://mogai-genders.fandom.com/wiki/Transgender|https://lgbtqia.fandom.com/wiki/Transgender|https://lgbtq-wiki.fandom.com/wiki/Transgender|https://lgbta.fandom.com/wiki/Transgender|https://lgbt.wikia.org/wiki/Transgender|https://lgbt-plus.fandom.com/wiki/Transgender|https://en.wikipedia.org/wiki/Transgender|https://en.wikipedia.org/wiki/Category:Transgender|https://data.nonbinary.wiki/wiki/Item:Q9,,,,,,,,,,,,,,,,,,,,,,,,transgender and nonbinary,,,,,GSSO:000096,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gsso.owl,,,,,,,,,ট্রান্সজেন্ডার|ट्रांसजेंडर|տրանսգենդեր|transkønnet|transkjønnet|transgênero|transgénero|transgjinor|transgenre|transgender|transgender|transcinsiyet,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Transgender people have a gender identity or gender expression that differs from their assigned sex. In some select cases, transgender people are sometimes called transsexual if they desire medical assistance to transition from one sex to another. ""Transgender"" is also an umbrella term: in addition to including people whose gender identity is the opposite of their assigned sex (trans men and trans women), it may include people who are not exclusively masculine or feminine (people who are genderqueer or non-binary, including bigender, pangender, genderfluid, or agender). Other definitions of transgender also include people who belong to a third gender, or else conceptualize transgender people as a third gender.|Not identifying with culturally conventional gender roles and categories of male or female; having changed gender identity from male to female or female to male, or identifying with elements of both, or having some other gender identity; or, pertaining to such people.|Having a gender (identity) which is different from the sex one was assigned at birth: being assigned male at birth but having a female gender or vice versa; or, pertaining to such people.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001886,designated area on Earth,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A designated area on earth is one or more areas defined by one or more boundaries.  A boundary can be defined by a polygon perimeter, a lat/long and radius, or a fiat-boundary geographic featureset like a named river channel or mountain ridge; it may have one or more names associated with it. Note that areas associated with a name may change their boundary definitions over time.|http://purl.obolibrary.org/obo/IAO_0000428",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001886,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,designated area on Earth,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00010088,"populated place, North Korea",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00010088,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, North Korea",http://purl.obolibrary.org/obo/GAZ_00002801,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C13308,Hepatic,hepatic|Hepatic,"Pertaining to, affecting, or associated with the liver.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,hepatic|Hepatic,,,,NCIT:C13308,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Hepatic,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Pertaining to, affecting, or associated with the liver.",,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00009554,Province (Solomon Islands),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00009554,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Province (Solomon Islands),http://purl.obolibrary.org/obo/GAZ_00005275,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/PATO_0001995,organismal quality,,A quality that inheres in an entire organism or part of an organism.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PATO:0001995,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/pato.owl,,,,,,,,,organismal quality,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A quality that inheres in an entire organism or part of an organism.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002163,subject organism common name specification,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002163,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,subject organism common name specification,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0001724,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HP_0005986,Limitation of neck motion,Limited neck mobility,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C1847392|UMLS:C1320474|UMLS:C0151315|SNOMEDCT_US:405947006|SNOMEDCT_US:161882006,,,,,,,,,,,,,,,,,,,,,,,,Limited neck mobility,Restricted neck movement|Limitation of neck motion,,,,HP:0005986,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Limitation of neck motion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0001557,material storage service,,A storage service in which a service consumer provides some material as input which a service provider stores and returns as output.,FALSE,,,,,,,,,,,,,,,,,,,,,PERSON: Matthew Brush,,,,,material storage service,,A service that offers liquid nitrogen stroage.,,,http://purl.obolibrary.org/obo/IAO_0000125,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0001557,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,material storage service,,,,,,,,,,,,,,,,,,,,,,,,,,,,PERSON: Matthew Brush|PERSON: Carlo Torniai,,,,A storage service in which a service consumer provides some material as input which a service provider stores and returns as output.,,,,,,,,
http://purl.obolibrary.org/obo/IAO_0000102,data about an ontology part,,"Data about an ontology part is a data item about a part of an ontology, for example a term",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,data about an ontology part,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,IAO:0000102,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/iao.owl,,,,,,,,,data about an ontology part,,,,,,,,,,,,,,,,,,,,,,,,,,,,Person:Alan Ruttenberg,,,,"Data about an ontology part is a data item about a part of an ontology, for example a term",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001930,SOLiD 5500xl,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI SRA: AB SOLiD 5500xl,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001930,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SOLiD 5500xl,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000266,pasture,,A grassland ecosystem which is used for grazing of ungulate livestock as part of a farm or ranch.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Geonames:L.GRAZ|FTT:67|FTT:45,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00000266,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,pasture,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A grassland ecosystem which is used for grazing of ungulate livestock as part of a farm or ranch.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530212,conventional under glass/protected cultivation,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0212,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530212,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,conventional under glass/protected cultivation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100720,microbiological identification tag (Sensititre),microbiological identification data type (Sensititre),A microbiological characterization data tag which indicates the presence of microbiological identification data derived using the Sensititre identification system.,FALSE,,,,,,,microbiological identification (Sensititre),,,,,,,Example Guidance: Use this tag to indicate additional data is available that provides identification information from microbiology properties generated using Sensititre.,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,microbiological identification data type (Sensititre),,,,GENEPIO:0100720,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-05-18T19:08:34.869Z,,,,,,,,,,,,,,,,,,,microbiological identification tag (Sensititre),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A microbiological characterization data tag which indicates the presence of microbiological identification data derived using the Sensititre identification system.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510256,"child as food consumer, less than four years",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0256,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510256,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"child as food consumer, less than four years",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HP_0011458,Abdominal symptom,,A subjective manifestation of disease localized to the abdomen.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0740651,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0011458,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abdominal symptom,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A subjective manifestation of disease localized to the abdomen.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0011450,Unusual CNS infection,Central nervous system infection,A type of infection of the central nervous system that can be regarded as a sign of a pathological susceptibility to infection.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0007684|SNOMEDCT_US:128117002,,,,,,,,,,,,,,,,,,,,,,,,,Central nervous system infection,,,,HP:0011450,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Unusual CNS infection,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A type of infection of the central nervous system that can be regarded as a sign of a pathological susceptibility to infection.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0060859,salmonellosis,,"A primary bacterial infectious disease caused by the bacteria of the genus Salmonella. It has symptoms diarrhea, fever, vomiting, and abdominal cramps 12 to 72 hours after infection. In most cases, the illness lasts four to seven days, and most people recover without treatment.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0060859,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,salmonellosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A primary bacterial infectious disease caused by the bacteria of the genus Salmonella. It has symptoms diarrhea, fever, vomiting, and abdominal cramps 12 to 72 hours after infection. In most cases, the illness lasts four to seven days, and most people recover without treatment.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001131,IRIDA sample ID,IRIDA sample name|IRIDA sample identifier,An identifier field which describes the identifer assigned to a sequenced isolate in Integrated Rapid Infectious Disease Analysis (IRIDA) bioinformatics platform.,FALSE,,,,,,,PCDS:irida_sample_name,,,,,,,"PCDS: Store the IRIDA sample name. The IRIDA sample name will be created by the individual entering data into the IRIDA platform. IRIDA samples may be linked to metadata and sequence data, or just metadata alone. It is recommended that the IRIDA sample name be the same as, or contain, the specimen collector sample ID for better traceability. It is also recommended that the IRIDA sample name mirror the GISAID accession. IRIDA sample names cannot contain slashes. Slashes should be replaced by underscores. See IRIDA documentation for more information regarding special characters (https://irida.corefacility.ca/documentation/user/user/samples/#adding-a-new-sample).",,,,,,,,,,,,,,PCDS: prov_rona_99,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,IRIDA sample name|IRIDA sample identifier,Integrated Rapid Infectious Disease Analysis sample name|Integrated Rapid Infectious Disease Analysis sample identifier|Integrated Rapid Infectious Disease Analysis sample ID|IRIDA sample name|IRIDA sample identifier|IRIDA sample ID,,,,GENEPIO:0001131,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,IRIDA sample ID,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An identifier field which describes the identifer assigned to a sequenced isolate in Integrated Rapid Infectious Disease Analysis (IRIDA) bioinformatics platform.,,PCDS: The identifier assigned to a sequenced isolate in IRIDA.,,,,,,
http://purl.obolibrary.org/obo/UBERON_0002167,right lung,,"Lung which consists of the right upper lobe, middle lobe and right lower lobe.[FMA].",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Right_lung|VHOG:0000301|UMLS:C0225706|SCTID:361967000|NCIT:C33483|MA:0000426|FMA:7309|EMAPA:17661|EHDAA:4969|EHDAA2:0001730,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0002167,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,right lung,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Lung which consists of the right upper lobe, middle lobe and right lower lobe.[FMA].",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0002169,alveolar sac,sacculus alveolaris|pulmonary alveolar sac,The small terminal dilation of the alveolar ducts around which the alveoli form pocket-like clusters.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Alveolar_sac|UMLS:C0225691|SCTID:361964007|NCIT:C32057|MA:0000418|FMA:7317|EMAPA:35119|BTO:0000061,,,,,,,,,,,,,,,,,,,,,,,UBERON:0008871,,sacculus alveolaris|pulmonary alveolar sac,,,,UBERON:0002169,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,alveolar sac,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The small terminal dilation of the alveolar ducts around which the alveoli form pocket-like clusters.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530113,commissary food preparation process,,The process of preparing food in a commissary.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0113,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530113,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,commissary food preparation process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The process of preparing food in a commissary.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100705,land use information documentation tag,land use information data type,A documentation data tag which indicates the presence of data that describes land use information.,FALSE,,,,,,,land use information,,,,,,,Example Guidance: Use this tag to indicate additional data is available that provides information describing human use of the land.,,,,,,,,,,,"https://www.epa.gov/report-environment/land-use used as a partial source for the ""Example Guidance"".",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,land use information data type,,,,GENEPIO:0100705,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-05-18T19:08:34.869Z,,,,,,,,,,,,,,,,,,,land use information documentation tag,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A documentation data tag which indicates the presence of data that describes land use information.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100737,enterobacterial repetitive intergenic consensus (ERIC) PCR fingerprint tag,enterobacterial repetitive intergenic consensus polymerase chain reaction fingerprint data type|ERIC PCR fingerprint tag|ERIC PCR fingerprint data type,A PCR marker detection characterization data tag which indicates the presence of enterobacterial repetitive intergenic consensus (ERIC) PCR fingerprint data.,FALSE,,,,,,,ERIC PCR fingerprint,,,,,,,Example Guidance: Use this tag to indicate additional data is available that provides characterization information from ERCI PCR fingerprint assay(s).,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,enterobacterial repetitive intergenic consensus polymerase chain reaction fingerprint data type|ERIC PCR fingerprint tag|ERIC PCR fingerprint data type,,,,GENEPIO:0100737,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-05-18T19:08:34.869Z,,,,,,,,,,,,,,,,,,,enterobacterial repetitive intergenic consensus (ERIC) PCR fingerprint tag,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A PCR marker detection characterization data tag which indicates the presence of enterobacterial repetitive intergenic consensus (ERIC) PCR fingerprint data.,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0001208,acute respiratory failure,"respiratory failure, acute|acute respiratory failure","Life-threatening respiratory failure that develops rapidly. Causes include injury, sepsis, drug overdose, and pancreatitis. It manifests with dyspnea and cyanosis and may lead to cardiovascular shock.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,icd11.foundation:875272781|UMLS:C0264490|SCTID:65710008|NCIT:C27043|MEDGEN:75540|ICD9:518.81|ICD10CM:J96.0,,,,,,,,,,,,,,,,,,,,,,,,,"respiratory failure, acute|acute respiratory failure",,,,MONDO:0001208,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,acute respiratory failure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Life-threatening respiratory failure that develops rapidly. Causes include injury, sepsis, drug overdose, and pancreatitis. It manifests with dyspnea and cyanosis and may lead to cardiovascular shock.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001643,Agriculture and Agri-Food Canada,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,IRIDA:ACK|INSDC:institution_code:BRS,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001643,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Agriculture and Agri-Food Canada,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0008291,down feather,powder down feather|natal down feather|body down feather,A feather lacking a vane and having a rudimentary rachis and a tuft of non-interlocked barbs with elongated barbules extending from the calamus.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley's note: Poultry fluff is both an 'anatomical structure' and a body product when it is shed.,,,,,,,Wikipedia:Down_feather,,,,,,,,,,,,,,,,,,,,,,,,,plumulaceous feather|plumaceous feather|downy feather,powder down feather|natal down feather|body down feather,,,UBERON:0008291,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,down feather,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A feather lacking a vane and having a rudimentary rachis and a tuft of non-interlocked barbs with elongated barbules extending from the calamus.,,,,poultry fluff,,,,
http://purl.obolibrary.org/obo/FOODON_03510069,no or reduced fat claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0069,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510069,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,no or reduced fat claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038796,lymph node along bile duct,no. 12b hepatic lymph node|jPS No. 12b node|jPS 12b node|biliary lymph node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:281309,,,,,,,,,,,,,,,,,,,,,,,,,no. 12b hepatic lymph node|jPS No. 12b node|jPS 12b node|biliary lymph node,,,,UBERON:0038796,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,lymph node along bile duct,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490407,polyvinyl chloride - polyvinylidene chloride container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0407,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490407,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,polyvinyl chloride - polyvinylidene chloride container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000123,radian,rad,"A plane angle unit which is equal to the angle subtended at the center of a circle by an arc equal in length to the radius of the circle, approximately 57 degrees 17 minutes and 44.6 seconds.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,rad,,,,UO:0000123,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,radian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A plane angle unit which is equal to the angle subtended at the center of a circle by an arc equal in length to the radius of the circle, approximately 57 degrees 17 minutes and 44.6 seconds.",,,,,,,,
http://purl.obolibrary.org/obo/UO_0000121,angle unit,,A unit which is a standard measure of the figure or space formed by the junction of two lines or planes.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:0000121,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,angle unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A unit which is a standard measure of the figure or space formed by the junction of two lines or planes.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000122,plane angle unit,,A unit which is a standard measure of the angle formed by two straight lines in the same plane.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:0000122,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,plane angle unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A unit which is a standard measure of the angle formed by two straight lines in the same plane.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100457,alternative isolate id,alternative_isolate_ID|alternative isolate identifier|alternative isolate ID,A data field which describes an isolate identifier assigned to the isolate by another organization.,FALSE,,,,,,,PCDS:alternative_isolate_id,,,,,,,"PCDS: Alternative isolate IDs should be provided in the in a prescribed format which consists of the ID followed by square brackets (no space in between the ID and bracket) containing the short form of ID provider's agency name i.e. ID[short organization code]. Multiple alternative isolate IDs can be provided, separated by semi-colons.",,,,,,,,,,,,,,PCDS: GHIF3456[PHAC]; QWICK222[CFIA],,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,alternative_isolate_ID|alternative isolate identifier|alternative isolate ID,alternative isolate identifier slot|alternative isolate identifier field|alternative isolate ID slot,,,,GENEPIO:0100457,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,alternative isolate id,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes an isolate identifier assigned to the isolate by another organization.,,PCDS: An alternative isolate ID assigned to the isolate by another organization.,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000232,beef large end rib roast (raw),,A raw beef large end rib roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000232,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef large end rib roast (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef large end rib roast.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100312,host ethnicity,host ethnicity,A host data field which describes the self-identified ethnicity(ies) of the host.,FALSE,,,,,,,PCDS:host_ethnicity,,,,,,,"PCDS: If known, provide the self-identified ethnicity or ethnicities of the host as a free text description. This is highly sensitive information which must be treated respectfully and carefully when sharing. The information may have implications for equitable access and benefit sharing. Consult your privacy officer, data steward and/or cultural services representative.",,,,,,,,,,,,,,"PCDS: Indigenous, European",,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,host ethnicity,host ethnicity slot,,,,GENEPIO:0100312,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,host ethnicity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A host data field which describes the self-identified ethnicity(ies) of the host.,,PCDS: The self-identified ethnicity(ies) of the host.,,,,,,
http://purl.obolibrary.org/obo/HP_0100755,Abnormality of salivation,Abnormality of salivation|Abnormal spit,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4021978,,,,,,,,,,,,,,,,,,,,,,,,,Abnormality of salivation|Abnormal spit,,,,HP:0100755,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormality of salivation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C60776,Contact Information,Contact Information|Contact Info,Information regarding the means of contacting a person or group.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Contact Information|Contact Info,,,,NCIT:C60776,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Contact Information,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Information regarding the means of contacting a person or group.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100834,taxonomic reference database name,taxonomic reference database name,A data field which describes the name of the taxonomic reference database used to identify the organism.,FALSE,,,,,,,PCDS:taxonomic_reference_database_name,,,,,,,PCDS: Provide the name of the taxonomic reference database.,,,,,,,,,,,,,,PCDS: NCBITaxon,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,taxonomic reference database name,taxonomic reference database name slot,,,,GENEPIO:0100834,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,taxonomic reference database name,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the name of the taxonomic reference database used to identify the organism.,,PCDS: The name of the taxonomic reference database used to identify the organism.,,,,,,
http://purl.obolibrary.org/obo/CHEBI_138675,gas molecular entity,,Any main group molecular entity that is gaseous at standard temperature and pressure (STP; 0°C and 100 kPa).,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:138675,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,gas molecular entity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any main group molecular entity that is gaseous at standard temperature and pressure (STP; 0°C and 100 kPa).,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000021,culture isolation date,,A culture isolation date is a date-time entity marking the end of a process in which a sample is isolated as a single colony or non-mixture culture,FALSE,,,,,,,,,,,,,,,,,,,,,GROUP: IRIDA Ontology (Morag),,,,,,,year/month/day,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000021,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,,,,,,,culture isolation date,,,,,Collection,,,,,,,,,,,,,,,,,,,,,,Culture isolation date,Damion Dooley,,suggested in metadata feedback,,A culture isolation date is a date-time entity marking the end of a process in which a sample is isolated as a single colony or non-mixture culture,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001167,sequence submitter contact address,sequence submitter contact address,A data field which describes the mailing address of the agency responsible for submission of the sequence.,FALSE,,,,,,,PCDS:sequence_submitter_contact_address,,,,,,,"PCDS: The mailing address should be in the format: Street number and name, City, Province/Territory, Postal Code, Country",,,,,,,,,,,Not to be confused with 'sequenced by contact address' http://purl.obolibrary.org/obo/GENEPIO_0100423,,,"PCDS: 123 Sunnybrooke St, Toronto, Ontario, M4P 1L6, Canada",,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,sequence submitter contact address,sequence submitter contact address slot,,,,GENEPIO:0001167,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,sequence submitter contact address,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the mailing address of the agency responsible for submission of the sequence.,,PCDS: The mailing address of the agency submitting the sequence.,,,,,,
http://purl.obolibrary.org/obo/MONDO_0005068,myocardial infarction,"myocardial infarction, (MI)|myocardial infarction (disease)|myocardial infarction|myocardial infarct|infarction (MI), myocardial|heart attack|MI, myocardial infarction|MI","Gross necrosis of the myocardium, as a result of interruption of the blood supply to the area, as in coronary thrombosis.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0027051|SCTID:22298006|NCIT:C27996|NANDO:2200248|MESH:D009203|MEDGEN:10150|ICD10CM:I21|HP:0001658|EFO:0000612|DOID:5844,,,,,,,,,,,,,,,,,,,,,,,,,"myocardial infarction, (MI)|myocardial infarction (disease)|myocardial infarction|myocardial infarct|infarction (MI), myocardial|heart attack|MI, myocardial infarction|MI",,,,MONDO:0005068,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,myocardial infarction,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Gross necrosis of the myocardium, as a result of interruption of the blood supply to the area, as in coronary thrombosis.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000449,bison top round steak,,A steak cut from the bison top round.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000449,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,bison top round steak,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A steak cut from the bison top round.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02010310,animal steak,,An animal meat cut that has a flat-cut appearance.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02010310,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,animal steak,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An animal meat cut that has a flat-cut appearance.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000192,beef brisket flat half (raw),,A raw beef brisket flat half cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000192,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef brisket flat half (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef brisket flat half cut.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03308394,fish steak (raw),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://bioregistry.io/reference/siren:F8394,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03308394,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,fish steak (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000354,veal rib,,A veal primal cut that is situated under the front section of the backbone and used primarily for support.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000354,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,veal rib,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A veal primal cut that is situated under the front section of the backbone and used primarily for support.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C48655,Missing Value Reason,Missing Value Reason|MVR,"A specific reason explaining why a meaningful value is not available. A meaningful value answers the question posed by a Data Element Concept. In contrast, a Missing Value Reason answers the implicit question ""Why is there no 'meaningful' value?"", when there is none.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Missing Value Reason|MVR,,,,NCIT:C48655,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Missing Value Reason,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A specific reason explaining why a meaningful value is not available. A meaningful value answers the question posed by a Data Element Concept. In contrast, a Missing Value Reason answers the implicit question ""Why is there no 'meaningful' value?"", when there is none.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C15258,Immunization,immunization|Immunization,Inoculating an individual with either killed or live agents to prevent contraction of a disease.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,immunization|Immunization,,,,NCIT:C15258,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Immunization,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Inoculating an individual with either killed or live agents to prevent contraction of a disease.,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_314146,Euarchontoglires,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,Euarchontoglires,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:314146,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Euarchontoglires,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_314147,Glires,,,FALSE,,,,,,,Rodents and rabbits,,,,,,,,,,,,,,,,,,,Glires,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:314147,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Glires,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_314145,Laurasiatheria,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,Laurasiatheria,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:314145,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Laurasiatheria,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100528,AMR laboratory typing platform version,antimicrobial resistance laboratory typing platform version|AMR_laboratory_typing_platform_version|AMR laboratory typing platform version,"An antimicrobial resistance (AMR) field which describes the specific name and version of the plate, panel, or other platform used for antibiotic susceptibility testing.",FALSE,,,,,,,PCDS:amr_laboratory_typing_platform_version|PCDS:*_laboratory_typing_platform_version,,,,,,,PCDS: Include any additional information about the antimicrobial susceptibility test such as the drug panel details.,,,,,,,,,,,,,,PCDS: CMV3AGNF,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,antimicrobial resistance laboratory typing platform version|AMR_laboratory_typing_platform_version|AMR laboratory typing platform version,antimicrobial resistance laboratory typing platform version slot|antimicrobial resistance laboratory typing platform version field|AMR laboratory typing platform version slot,,,,GENEPIO:0100528,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-12-22T00:55:53.808Z,,,,,,,,,,,,,,,,,,,AMR laboratory typing platform version,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An antimicrobial resistance (AMR) field which describes the specific name and version of the plate, panel, or other platform used for antibiotic susceptibility testing.",,"PCDS: The specific name and version of the plate, panel, or other platform used for antibiotic susceptibility testing.",,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100561,quality control details,quality control details,A data field which describes the details surrounding a low quality determination in a quality control assessment.,FALSE,,,,,,,PCDS:quality_control_details,,,,,,,PCDS: Provide notes or details regarding QC results using free text.,,,,,,,,,,,,,,PCDS: CT value of 39. Low viral load. Low DNA concentration after amplification.,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,quality control details,quality control details slot|quality control details field|qc details slot|qc details field,,,,GENEPIO:0100561,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-1107-9135,2023-01-23T00:42:19.315Z,,,,,,,,,,,,,,,,,,,quality control details,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the details surrounding a low quality determination in a quality control assessment.,,PCDS: The details surrounding a low quality determination in a quality control assessment.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100112,Illumina HiSeq X Five,Illumina HiSeq X 5,A DNA sequencer manufactured by the Illumina corporation using sequence-by-synthesis chemistry that consists of a set of 5 HiSeq X Sequencing Systems.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,Illumina HiSeq X 5,,,,GENEPIO:0100112,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,Illumina HiSeq X Five,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A DNA sequencer manufactured by the Illumina corporation using sequence-by-synthesis chemistry that consists of a set of 5 HiSeq X Sequencing Systems.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02010188,"piece of animal breast (with skin, raw)",,A raw piece of animal breast that contains skin.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02010188,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"piece of animal breast (with skin, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw piece of animal breast that contains skin.,,,,,,,,
http://purl.obolibrary.org/obo/PCO_0000038,wedding,,A human social gathering at which two people are married. May include a legal or social ceremony.,FALSE,,,,,,,,,,,,,,,,,,,,,GenEpio curators,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PCO:0000038,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/pco.owl,,,,,,,,,wedding,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A human social gathering at which two people are married. May include a legal or social ceremony.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100627,bioinformatics analysis details,,PCDS: Enter any notes regarding the analysis as free text.,FALSE,,,,,,,PCDS:bioinformatics_analysis_details,,,,,,,PCDS: Enter any notes regarding the analysis as free text.,,,,,,,,,,,,,,"PCDS: Pure-June 09-2022,Tube replaced by Rahgavi",,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100627,,,,,,,,,,,,,,2026-04-13T17:16:47.336Z,,,,,,,,,,,,,,,,,,,bioinformatics analysis details,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PCDS: Any notes regarding the bioinformatics analysis.,,,,,,
http://purl.obolibrary.org/obo/FOODON_03500018,enamel surface for citrus fruit,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=N0018,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03500018,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,enamel surface for citrus fruit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0005575,colorectal cancer,"malignant tumour of the large intestine|malignant tumour of the large bowel|malignant tumour of large intestine|malignant tumour of large bowel|malignant tumor of the large intestine|malignant tumor of the large bowel|malignant tumor of large intestine|malignant tumor of large bowel|malignant neoplasm of the large intestine|malignant neoplasm of the large bowel|malignant neoplasm of large intestine|malignant neoplasm of large bowel|malignant neoplasm of colorectum|malignant large intestine tumour|malignant large intestine tumor|malignant large intestine neoplasm|malignant large bowel tumour|malignant large bowel tumor|malignant large bowel neoplasm|malignant colorectum neoplasm|malignant colorectal tumour|malignant colorectal tumor|malignant colorectal neoplasm|colorectum cancer|colorectal cancer, susceptibility to, autosomal dominant, somatic mutation|colorectal cancer, somatic|colorectal cancer, autosomal dominant, somatic mutation|colorectal cancer with chromosomal instability, somatic|colorectal cancer|colon cancer, somatic|colon cancer, advanced, somatic|cancer of the large bowel|cancer of large intestine|cancer of large bowel|cancer of colorectum","A primary or metastatic malignant neoplasm that affects the colon or rectum. Representative examples include carcinoma, lymphoma, and sarcoma.",FALSE,,,,,,,,,,,,,,Editor note: some sources make distinct classes for colorectal vs large intestine. We follow NCIT and make these equivalent,,,,,,,,,,,,,,,,,,UMLS:C0346629|SCTID:363510005|Orphanet:466667|OMIM:114500|NCIT:C4978|MEDGEN:83428|DOID:9256|DOID:5672,,,,,,,,,,,,,,,,,,,,,,,,,"malignant tumour of the large intestine|malignant tumour of the large bowel|malignant tumour of large intestine|malignant tumour of large bowel|malignant tumor of the large intestine|malignant tumor of the large bowel|malignant tumor of large intestine|malignant tumor of large bowel|malignant neoplasm of the large intestine|malignant neoplasm of the large bowel|malignant neoplasm of large intestine|malignant neoplasm of large bowel|malignant neoplasm of colorectum|malignant large intestine tumour|malignant large intestine tumor|malignant large intestine neoplasm|malignant large bowel tumour|malignant large bowel tumor|malignant large bowel neoplasm|malignant colorectum neoplasm|malignant colorectal tumour|malignant colorectal tumor|malignant colorectal neoplasm|colorectum cancer|colorectal cancer, susceptibility to, autosomal dominant, somatic mutation|colorectal cancer, somatic|colorectal cancer, autosomal dominant, somatic mutation|colorectal cancer with chromosomal instability, somatic|colorectal cancer|colon cancer, somatic|colon cancer, advanced, somatic|cancer of the large bowel|cancer of large intestine|cancer of large bowel|cancer of colorectum",,,,MONDO:0005575,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar|http://purl.oboInOwllibrary.org/oboInOwl/mondo#omim_susceptibility,,,,,,,,colorectal cancer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A primary or metastatic malignant neoplasm that affects the colon or rectum. Representative examples include carcinoma, lymphoma, and sarcoma.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03430111,cut into short pieces,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=E0111,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03430111,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,cut into short pieces,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00003356,pet food (raw),,A pet food that has not been heat treated or otherwise preserved.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00003356,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pet food (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A pet food that has not been heat treated or otherwise preserved.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001534,disease cluster notification agency,,An agency that has reported a disease cluster.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001534,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,disease cluster notification agency,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,An agency that has reported a disease cluster.,,,,,,,,
http://purl.obolibrary.org/obo/OBA_2001018,age of onset of amyotrophic lateral sclerosis,age at onset of amyotrophic lateral sclerosis|age amyotrophic lateral sclerosis symptoms begin,The age at which amyotrophic lateral sclerosis manifestations first appear.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,age at onset of amyotrophic lateral sclerosis|age amyotrophic lateral sclerosis symptoms begin,,,,OBA:2001018,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age of onset of amyotrophic lateral sclerosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The age at which amyotrophic lateral sclerosis manifestations first appear.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0002790,N95 respirator,,"A face mask that meets the U.S. National Institute for Occupational Safety and Health (NIOSH) N95 classification of air filtration, meaning that it filters at least 95% of incoming airborne particles.",FALSE,,,,,,,N95 respirator mask|N95 facemask|N95 face mask|N95,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/N95_mask,,,,,N95 respirator,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0002790,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,N95 respirator,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://orcid.org/0000-0002-8844-9165,,,https://github.com/obi-ontology/obi/issues/1193,"A face mask that meets the U.S. National Institute for Occupational Safety and Health (NIOSH) N95 classification of air filtration, meaning that it filters at least 95% of incoming airborne particles.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100580,antiviral therapy,antiviral therapy,A data field which describes treatment of viral infections with agents that prevent viral replication in infected cells without impairing the host cell function.,FALSE,,,,,,,PCDS:antiviral_therapy,,,,,,,PCDS: Provide details of all current antiviral treatment during the current Monkeypox infection period. Consult with the data steward prior to sharing this information.,,,,,,,,,,,,,,PCDS: Tecovirimat used to treat current Monkeypox infection; AZT administered for concurrent HIV infection,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,antiviral therapy,antiviral therapy slot,,,,GENEPIO:0100580,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,antiviral therapy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes treatment of viral infections with agents that prevent viral replication in infected cells without impairing the host cell function.,,PCDS: Treatment of viral infections with agents that prevent viral replication in infected cells without impairing the host cell function.,,,,,,
http://purl.obolibrary.org/obo/OBI_0002088,specimen container,,A container with the function of containing a specimen.,FALSE,,,,,,,,,,,,,,,,,,,,,"Duke Biobank, OBIB",,,,For details see tracker item: http://sourceforge.net/p/obi/obi-terms/792/,specimen container,,"COPAN eSwab, CPT vacutainer, PAXgene Blood DNA tube",,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0002088,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,specimen container,,,,,,,,,,,,,,,,,,,,,,,,,,,,Chris Stoeckert,,,,A container with the function of containing a specimen.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_25384,monocarboxylic acid,,An oxoacid containing a single carboxy group.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:25384,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,monocarboxylic acid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An oxoacid containing a single carboxy group.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0101118,genetic target region reference genome,,,FALSE,,,,,,,PCDS:genetic_target_region_reference_genome,,,,,,,,,,,,,,,,,,,,,,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0101118,,,,,,,,,,,,,,2026-04-13T17:18:02.461Z,,,,,,,,,,,,,,,,,,,genetic target region reference genome,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PCDS: The reference genome version used to determine the coordinates or identity of the genetic target region in testing or analysis.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100420,community healthcare worker,,"A role inhering in a person that is realized when the bearer a professional caregiver that provides health care or supportive care in the individual home where the patient or client is living, as opposed to care provided in group accommodations like clinics or nursing home.",FALSE,,,,,,,Community Healthcare Worker,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100420,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,community healthcare worker,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A role inhering in a person that is realized when the bearer a professional caregiver that provides health care or supportive care in the individual home where the patient or client is living, as opposed to care provided in group accommodations like clinics or nursing home.",,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0511,Mauritian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0511,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Mauritian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0515,Senegalese,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0515,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Senegalese,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0513,Namibian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0513,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Namibian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0510,Mauritanian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0510,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Mauritanian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0512,Mahoran,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0512,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Mahoran,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0514,Sao Tomean,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0514,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Sao Tomean,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0519,South African,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0519,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,South African,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0517,Sierra Leonean,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0517,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Sierra Leonean,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001496,outbreak over,,An outbreak over date is the date on which a disease outbreak appears to have abated,FALSE,,,,,http://purl.obolibrary.org/obo/GENEPIO_0001495,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001496,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,outbreak over,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,An outbreak over date is the date on which a disease outbreak appears to have abated,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03308311,fish (portion cut),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://bioregistry.io/reference/siren:F8311,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03308311,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,fish (portion cut),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001251,exposure event person,,The type of person a patient had epidemiological (i.e. close proximity) contact with.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001251,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,exposure event person,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,The type of person a patient had epidemiological (i.e. close proximity) contact with.,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_59201,Salmonella enterica subsp. enterica,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,Salmonella enterica subsp. enterica,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:59201,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Salmonella enterica subsp. enterica,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001551,close interpersonal relationship exposure,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001551,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,close interpersonal relationship exposure,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001859,n-dimensional concept,,"This covers the description of data and abstract structure in n-dimensional space.  Within space there are coordinate systems, coordinates, and entities made up of coordinates.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001859,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,n-dimensional concept,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"This covers the description of data and abstract structure in n-dimensional space.  Within space there are coordinate systems, coordinates, and entities made up of coordinates.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490131,"plastic tray or pan, cardboard cover",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0131,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490131,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"plastic tray or pan, cardboard cover",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000145,draft WGS lab bioinformatics process record,,A data specification which records the bioinformatics process of a draft whole genome sequencing product.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000145,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,draft WGS lab bioinformatics process record,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A data specification which records the bioinformatics process of a draft whole genome sequencing product.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C574,Immunosuppressant,immunosuppressive_treatment_type|immunosuppressive treatment type|immunosuppressive|immunosuppressant|Immunosuppressive Agents|Immunosuppressant,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,immunosuppressive_treatment_type|immunosuppressive treatment type|immunosuppressive|immunosuppressant|Immunosuppressive Agents|Immunosuppressant,,,,NCIT:C574,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Immunosuppressant,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00004031,"populated place, Mauritania",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00004031,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Mauritania",http://purl.obolibrary.org/obo/GAZ_00000583,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510234,traditional food claim,,"A food claim indicating that the product is frequently consumed or associated to specific celebrations and/or seasons, normally transmitted from one generation to another, made with care in a specific way according to the gastronomic heritage, with little or no processing/manipulation, that is distinguished and known because of its sensory properties and associated to a certain local area, region or country.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0234,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510234,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,traditional food claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A food claim indicating that the product is frequently consumed or associated to specific celebrations and/or seasons, normally transmitted from one generation to another, made with care in a specific way according to the gastronomic heritage, with little or no processing/manipulation, that is distinguished and known because of its sensory properties and associated to a certain local area, region or country.",,,,,,,,
http://purl.obolibrary.org/obo/HP_0032251,Abnormal immune system morphology,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0032251,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal immune system morphology,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001912,ones,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001912,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0001916,,,,,,,,,,,ones,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000148,beef top sirloin butt (raw),,A raw beef top sirloin butt.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000148,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef top sirloin butt (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef top sirloin butt.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100074,cardiac injury,,Trauma to the cardiac muscle or valves.,FALSE,,,,,,,,,,,,,,,,,,,,,https://www.ebi.ac.uk/ols/ontologies/ncit/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FNCIT_C45430,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100074,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,cardiac injury,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Trauma to the cardiac muscle or valves.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0500000,study design,,A plan specification comprised of protocols (which may specify how and what kinds of data will be gathered) that are executed as part of an investigation and is realized during a study design execution.,FALSE,,,,,,,experimental design,,,,,,,,,,,,,rediscussed at length (MC/JF/BP). 12/9/08). The definition was clarified to differentiate it from protocol.,,,,,Editor note: there is at least an implicit restriction on the kind of data transformations that can be done based on the measured data available.,study design,,"a matched pairs study design describes criteria by which subjects are identified as pairs which then undergo the same protocols, and the data generated is analyzed by comparing the differences between the paired subjects, which constitute the results of the executed study design.",,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0500000,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,study design,,,,,,,,,,,,,,,,,,,,,,,,,,,,PERSON: Chris Stoeckert,,,,A plan specification comprised of protocols (which may specify how and what kinds of data will be gathered) that are executed as part of an investigation and is realized during a study design execution.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0001901,specimen identifier assigned by sequencing facility,,A specimen identifier which is assigned by a sequencing facility,FALSE,,,,,,,,,,,,,,,,,,,,,NIAID GSCID-BRC metadata working group,,,,,specimen identifier assigned by sequencing facility,,,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0001901,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,specimen identifier assigned by sequencing facility,,,,,,,Sample ID - Sequencing Facility,,,,,,,,,,,,,,,,,,,,,"PERSON: Chris Stoeckert, Jie Zheng",,,,A specimen identifier which is assigned by a sequencing facility,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0004512,fecal composite,,A mixture of feces obtained from multiple individuals.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0004512,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-5275-8866,2023-11-28T14:45:32Z,,,,,,,,,,,,,,,,,,,fecal composite,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A mixture of feces obtained from multiple individuals.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001985,MNase-Seq strategy,,Direct sequencing following MNase digestion.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI SRA: MNase-Seq,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001985,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MNase-Seq strategy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Direct sequencing following MNase digestion.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00004335,piece(s) of animal,,One or more pieces of animals.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00004335,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece(s) of animal,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,One or more pieces of animals.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_47779,aminoglycoside,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:47779,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,aminoglycoside,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002186,PulseNet Canada Salmonella field,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002186,,,,,,,,,,,,,,2019-04-17T23:41:56Z,,,,,,,,,,,,,,,,,,,PulseNet Canada Salmonella field,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510223,food allergen labelling about mustard and products thereof,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0223,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510223,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food allergen labelling about mustard and products thereof,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510123,unbleached claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510123,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,unbleached claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490348,metalized paper coextruded with plastic,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0348,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490348,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,metalized paper coextruded with plastic,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_443725,fosmidomycin,,"Propylphosphonic acid in which one of the hydrogens at position 3 is substituted by a formyl(hydroxy)amino group. An antibiotic obtained from <em>Streptomyces lavendulae</em>, it specifically inhibits DXP reductoisomerase (EC 1.1.1.267), a key enzyme in the non-mevalonate pathway of isoprenoid biosynthesis.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:42526,,,,,,CHEBI:443725,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,fosmidomycin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Propylphosphonic acid in which one of the hydrogens at position 3 is substituted by a formyl(hydroxy)amino group. An antibiotic obtained from <em>Streptomyces lavendulae</em>, it specifically inhibits DXP reductoisomerase (EC 1.1.1.267), a key enzyme in the non-mevalonate pathway of isoprenoid biosynthesis.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510018,poultry as consumer,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0018,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510018,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,poultry as consumer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100126,Illumina NextSeq,,A DNA sequencer which is manufactured by the Illumina corporation using sequence-by-synthesis chemistry that fits on a benchtop and has an output capacity of 1.65-7.5 Gb.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100126,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,Illumina NextSeq,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A DNA sequencer which is manufactured by the Illumina corporation using sequence-by-synthesis chemistry that fits on a benchtop and has an output capacity of 1.65-7.5 Gb.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001626,environmental datum,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001626,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,environmental datum,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ARO_3004403,Vitek System,,Specific automated system of analysis for determining antimicrobial susceptibility developed by bioMérieux.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ARO:3004403,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/aro.owl,,,,,,,,,Vitek System,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Specific automated system of analysis for determining antimicrobial susceptibility developed by bioMérieux.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001055,NCBI pathotype,,A pathotype is a common name for a group of organisms (of the same species) that have the same pathogenicity on a specified host,FALSE,,,,,,,,,,,,,,,,,,,,,https://en.wiktionary.org/wiki/pathotype,,,,,,,"For Eschericia coli: STEC, UPEC",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001055,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI pathotype,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A pathotype is a common name for a group of organisms (of the same species) that have the same pathogenicity on a specified host,,,,,,,,
http://purl.obolibrary.org/obo/HP_0025429,Abnormal cry,,"Any anomaly of the vocalizing of an infant's crying, i.e.,the typically loud voice production that is accompanied by tears and agitation.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0025429,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal cry,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Any anomaly of the vocalizing of an infant's crying, i.e.,the typically loud voice production that is accompanied by tears and agitation.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510186,unfortified claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0186,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510186,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,unfortified claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00002563,Province of Ontario,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00002563,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Province of Ontario,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00002561,Province (Canada),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00002561,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Province (Canada),http://purl.obolibrary.org/obo/GAZ_00002560,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00002567,Province of Newfoundland and Labrador,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00002567,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Province of Newfoundland and Labrador,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00002564,Province of Saskatchewan,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00002564,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Province of Saskatchewan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00002562,Province of British Columbia,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00002562,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Province of British Columbia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00002566,Province of Alberta,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00002566,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Province of Alberta,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00002565,Province of Nova Scotia,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00002565,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Province of Nova Scotia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00002569,Province of Quebec,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00002569,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Province of Quebec,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0100026,obsolete: organism,,"A material entity that is an individual living system, such as animal, plant, bacteria or virus, that is capable of replicating or reproducing, growth and maintenance in the right environment. An organism may be unicellular or made up, like humans, of many billions of cells divided into specialized tissues and organs.",TRUE,,,,,,,,,,,,,,,,,,,,,WEB: http://en.wikipedia.org/wiki/Organism,,true,,"13-02-2009: OBI doesn't take position as to  when an organism starts or ends being an organism - e.g. sperm, foetus. This issue is outside the scope of OBI.|10/21/09: This is a placeholder term, that should ideally be imported from the NCBI taxonomy, but the high level hierarchy there does not suit our needs (includes plasmids and 'other organisms')",obsolete organism,,virus|plant|fungus|animal,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000228,,,,,,,,,,,,,,,,,,,OBI:0100026,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ido.owl,,,,,,,,,organism|obsolete: organism|obsolete organism,,,,,,,,,,,,,,,,,,,,,,,,,,,,GROUP: OBI Biomaterial Branch,http://purl.obolibrary.org/obo/COB_0000022,,,"A material entity that is an individual living system, such as animal, plant, bacteria or virus, that is capable of replicating or reproducing, growth and maintenance in the right environment. An organism may be unicellular or made up, like humans, of many billions of cells divided into specialized tissues and organs.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C161324,Demographic Group,Demographic Group,"A population group that is characterized by a common descriptive factor such as age, sex, race, education, etc.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Demographic Group,,,,NCIT:C161324,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Demographic Group,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A population group that is characterized by a common descriptive factor such as age, sex, race, education, etc.",,,,,,,,
http://purl.obolibrary.org/obo/SO_0001505,reference_genome,http://purl.obolibrary.org/obo/ERO_0002173,A collection of sequences (often chromosomes) taken as the standard for a given organism and genome assembly.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ERO_0002173,,,,SO:0001505,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/so.owl,,,,,,,,,reference_genome,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A collection of sequences (often chromosomes) taken as the standard for a given organism and genome assembly.,,,,,,,,
http://purl.obolibrary.org/obo/SO_0001507,variant_collection,,A collection of one or more sequences of an individual.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SO:0001507,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/so.owl,,,,,,,,,variant_collection,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A collection of one or more sequences of an individual.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C3367,Finding,finding|Observable Entity|Finding,"Clinical, laboratory or molecular evidence, or absence of evidence of disease.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,finding|Observable Entity|Finding,,,,NCIT:C3367,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Finding,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Clinical, laboratory or molecular evidence, or absence of evidence of disease.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C3364,Septicemia,toxemia|septicemia|sepsis|blood poisoning|Systemic Sepsis|Septicemia|Sepsis Syndrome|Sepsis,"The presence of pathogenic microorganisms in the blood stream causing a rapidly progressing systemic reaction that may lead to shock. Symptoms include fever, chills, tachycardia, and increased respiratory rate. It is a medical emergency that requires urgent medical attention.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,toxemia|septicemia|sepsis|blood poisoning|Systemic Sepsis|Septicemia|Sepsis Syndrome|Sepsis,,,,NCIT:C3364,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Septicemia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The presence of pathogenic microorganisms in the blood stream causing a rapidly progressing systemic reaction that may lead to shock. Symptoms include fever, chills, tachycardia, and increased respiratory rate. It is a medical emergency that requires urgent medical attention.",,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000127,badland,barren land,An arid terrain with clay-rich soil that has been extensively eroded by wind and water.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Badlands|TGN:21205|Geonames:T.BDLD|FTT:187|FTT:186,,,,,,,,,,,,,,,,,,,,,,,,barren land,badlands,,,,ENVO:00000127,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,badland,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An arid terrain with clay-rich soil that has been extensively eroded by wind and water.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001433,GENEPIO_0001433,,The IRIDA user ID is a user account identifier provided by the IRIDA.ca system.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001433,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,The IRIDA user ID is a user account identifier provided by the IRIDA.ca system.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510200,no pork added claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0200,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510200,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,no pork added claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_26469,quaternary nitrogen compound,,A nitrogen molecular entity that is electronically neutral but which contains a quaternary nitrogen.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:26469,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,quaternary nitrogen compound,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A nitrogen molecular entity that is electronically neutral but which contains a quaternary nitrogen.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0008872,Feeding difficulties in infancy,,"Impaired feeding performance of an infant as manifested by difficulties such as weak and ineffective sucking, brief bursts of sucking, and falling asleep during sucking. There may be difficulties with chewing or maintaining attention.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C2674608,,,,,,,,,,,,,,,,,,,,,,,HP:0002568|HP:0002022|HP:0002016,,,,,,HP:0008872,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Feeding difficulties in infancy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Impaired feeding performance of an infant as manifested by difficulties such as weak and ineffective sucking, brief bursts of sucking, and falling asleep during sucking. There may be difficulties with chewing or maintaining attention.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0015895,proximal deep inguinal lymph node,rosenmuller's node|rosenmuller's gland|proximal inguinal lymph node|proximal deep inguinal node|nodus lymphoideus inguinales profundi proximalis|nodus inguinales profundi proximalis,One of the deep inguinal lymph nodes located in or adjacent to the femoral canal; sometimes mistaken for a femoral hernia when enlarged.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:44303|BTO:0004550,,,,,,,,,,,,,,,,,,,,,,,,,rosenmuller's node|rosenmuller's gland|proximal inguinal lymph node|proximal deep inguinal node|nodus lymphoideus inguinales profundi proximalis|nodus inguinales profundi proximalis,,,,UBERON:0015895,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,proximal deep inguinal lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,One of the deep inguinal lymph nodes located in or adjacent to the femoral canal; sometimes mistaken for a femoral hernia when enlarged.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_124991,cefalotin,,"A semisynthetic, first-generation cephalosporin antibiotic with acetoxymethyl and (2-thienylacetyl)nitrilo moieties at positions 3 and 7, respectively, of the core structure. Administered parenterally during surgery and to treat a wide spectrum of blood infections.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:50895|CHEBI:41547,,,,,,CHEBI:124991,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,cefalotin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A semisynthetic, first-generation cephalosporin antibiotic with acetoxymethyl and (2-thienylacetyl)nitrilo moieties at positions 3 and 7, respectively, of the core structure. Administered parenterally during surgery and to treat a wide spectrum of blood infections.",,,,,,,,
http://purl.obolibrary.org/obo/ENVO_02000048,contaminated animal feed,,Contaminated animal feed is an animal feed that has become contaminated with or come contact with microorganisms or toxic chemicals.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:02000048,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,contaminated animal feed,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Contaminated animal feed is an animal feed that has become contaminated with or come contact with microorganisms or toxic chemicals.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000300,scrubland area,scrubland,Area covered with low-growing or stunted perennial vegetation and usually not mixed with trees.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Scrubland|TGN:21652|TGN:21644|SWEETRealm:Scrub|Geonames:V.SCRB|FTT:991|FTT:792|FTT:473|FTT:374|FTT:262|FTT:1191,,,,,,,,,,,,,,,,,,,,,,,,,scrubland,,,,ENVO:00000300,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,scrubland area,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Area covered with low-growing or stunted perennial vegetation and usually not mixed with trees.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_83628,N-acylammonia,,A carboxamide obtained by the formal condensation of the carboxy group of any carboxylic acid with ammonia.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:83628,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,N-acylammonia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A carboxamide obtained by the formal condensation of the carboxy group of any carboxylic acid with ammonia.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_5052,melioidosis,,"A primary bacterial infectious disease that results_in infection, has_material_basis_in Burkholderia pseudomallei, which is transmitted_by contact with the contaminated water or soil. The infection has_symptom fever, has_symptom respiratory distress, has_symptom chest pain, and has_symptom stomach pain.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:5052,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,melioidosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A primary bacterial infectious disease that results_in infection, has_material_basis_in Burkholderia pseudomallei, which is transmitted_by contact with the contaminated water or soil. The infection has_symptom fever, has_symptom respiratory distress, has_symptom chest pain, and has_symptom stomach pain.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001028,camping,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001028,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,camping,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C161420,First Degree Biological Relative,"RELATIVE, BIOLOGICAL, FIRST DEGREE|First Degree Biological Relative","Any individual related biologically to another individual and considered immediate family as in the case of a parent, sibling or child.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"RELATIVE, BIOLOGICAL, FIRST DEGREE|First Degree Biological Relative",,,,NCIT:C161420,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,First Degree Biological Relative,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Any individual related biologically to another individual and considered immediate family as in the case of a parent, sibling or child.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100472,sequencing project name,sequencing_project_name|sequencing project name,A data field which describes the name of the project/initiative/program for which sequencing was performed.,FALSE,,,,,,,PCDS:sequencing_project_name,,,,,,,"PCDS: Provide the name of the project and/or the project ID here. If the information is unknown or cannot be provided, leave blank or provide a null value.",,,,,,,,,,,,,,PCDS: MPOX-1356,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,sequencing_project_name|sequencing project name,sequencing project name slot,,,,GENEPIO:0100472,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,sequencing project name,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the name of the project/initiative/program for which sequencing was performed.,,PCDS: The name of the project/initiative/program for which sequencing was performed.,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490341,"paperboard container, surface treated",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0341,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490341,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"paperboard container, surface treated",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001073,draft tuberculosis - specimen contextual data standard,,The tuberculosis draft standard is a GenEpiO set of draft genomic and clinical data items related to Mycobacterium tuberculosis that various agencies are using in their own reporting.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001073,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,draft tuberculosis - specimen contextual data standard,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The tuberculosis draft standard is a GenEpiO set of draft genomic and clinical data items related to Mycobacterium tuberculosis that various agencies are using in their own reporting.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510225,food allergen labelling about sulphur dioxide and sulphites,,"Sulphur dioxide and sulphites are included in the EU list of allergens
because they can cause adverse reactions in some people.

Regulated by Directive 2003/89/EC of the European Parliament and of the Council of 10 November 2003 amending Directive 2000/13/EC as regards indication of the ingredients present in foodstuffs.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0225,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510225,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food allergen labelling about sulphur dioxide and sulphites,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Sulphur dioxide and sulphites are included in the EU list of allergens
because they can cause adverse reactions in some people.

Regulated by Directive 2003/89/EC of the European Parliament and of the Council of 10 November 2003 amending Directive 2000/13/EC as regards indication of the ingredients present in foodstuffs.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002124,fork,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002124,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,fork,,,,,,,,,,,,,,,,,,,,,,,,,,,,Emma Griffiths,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100609,reference gene sequence length datum,,A reference sequence length measurement datum which describes the number of base pairs of a gene retrieved from a reference sequence.,FALSE,,,,,,,reference gene length,,,,,,,,,,,,,,Emma Griffiths,,,,,reference gene sequence length datum,,The sequence length measurment datum for the SARS-CoV-2 reference sequence (NC_045512.2) ORF1ab gene (43740578) is 21289 bp.,,,ready for release,http://purl.obolibrary.org/obo/OBI_0002888,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100609,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,reference gene sequence length datum,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-1107-9135,,,https://github.com/obi-ontology/obi/issues/1579,A reference sequence length measurement datum which describes the number of base pairs of a gene retrieved from a reference sequence.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0030149,Cardiogenic shock,Cardiovascular shock,"Severely decreased cardiac output with evidence of inadequate end-organ perfusion (i.e., tissue hypoxia) in the presence of adequate intravascular volume.",FALSE,,,,,,,,,,,,,,"Cardiogenic shock can result from a number of different of cardiac insults, the most common of which is acute myocardial infarction.",,,,,,,,,,,,,,,,,,UMLS:C0036980|SNOMEDCT_US:89138009,,,,,,,,,,,,,,,,,,,,,,,,,Cardiovascular shock,,,,HP:0030149,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Cardiogenic shock,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Severely decreased cardiac output with evidence of inadequate end-organ perfusion (i.e., tissue hypoxia) in the presence of adequate intravascular volume.",,,,,,,,
http://purl.obolibrary.org/obo/HP_0030144,Hypoactive bowel sounds,Decreased bowel sounds,An decreased amount of bowel sounds.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0232695|SNOMEDCT_US:15280003,,,,,,,,,,,,,,,,,,,,,,,,,Decreased bowel sounds,,,,HP:0030144,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Hypoactive bowel sounds,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An decreased amount of bowel sounds.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0030143,Hyperactive bowel sounds,Increased bowel sounds|Borborygmi,Abnormally increased gurgling/rumbling sounds made by the movement of fluid and gas in the intestines.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0232694|SNOMEDCT_US:18101008,,,,,,,,,,,,,,,,,,,,,,,,,Increased bowel sounds|Borborygmi,,,,HP:0030143,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Hyperactive bowel sounds,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Abnormally increased gurgling/rumbling sounds made by the movement of fluid and gas in the intestines.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0030142,Abnormal bowel sounds,Abnormal bowel sounds,An anomaly of the amount or nature of abdominal sounds. Abdominal sounds (bowel sounds) are made by the movement of the intestines as they promote passage of abdominal contents by peristalsis.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0159060|SNOMEDCT_US:60612008,,,,,,,,,,,,,,,,,,,,,,,,,Abnormal bowel sounds,,,,HP:0030142,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal bowel sounds,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An anomaly of the amount or nature of abdominal sounds. Abdominal sounds (bowel sounds) are made by the movement of the intestines as they promote passage of abdominal contents by peristalsis.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0030145,Lack of bowel sounds,Lack of bowel sounds,Complete lack of abdominal sounds as assayed by examination of the abdomen with a stethoscope.,FALSE,,,,,,,,,,,,,,This feature reflects lack of intestinal activity.,,,,,,,,,,,,,,,,,,UMLS:C4022606,,,,,,,,,,,,,,,,,,,,,,,,,Lack of bowel sounds,,,,HP:0030145,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Lack of bowel sounds,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Complete lack of abdominal sounds as assayed by examination of the abdomen with a stethoscope.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000563,pier,,"A raised walkway over water, supported by piles or pillars.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,EcoLexicon:pier,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00000563,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,pier,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A raised walkway over water, supported by piles or pillars.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100607,sequence length measurement datum,,A length measurement datum which is the number of base pairs in a sequence.,FALSE,,,,,,,,,,,,,,,,,,,,,Emma Griffiths,,,,,sequence length measurement datum,,The sequence length measurement datum for the Zika virus E protein gene (AF372422.1) is 830 bp.,,,ready for release,http://purl.obolibrary.org/obo/OBI_0002886,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100607,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,sequence length measurement datum,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-1107-9135,,,https://github.com/obi-ontology/obi/issues/1579,A length measurement datum which is the number of base pairs in a sequence.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_22712,benzenes,,Any benzenoid aromatic compound consisting of the benzene skeleton and its substituted derivatives.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:22712,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,benzenes,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any benzenoid aromatic compound consisting of the benzene skeleton and its substituted derivatives.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00002272,waste treatment plant,WWTP,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WWTP,,,,ENVO:00002272,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,waste treatment plant,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510119,processing-related claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0119,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510119,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,processing-related claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_37578,halide,,Any heteroatomic molecular entity that is a chemical compound of halogen with other chemical elements.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:37578,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,halide,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any heteroatomic molecular entity that is a chemical compound of halogen with other chemical elements.,,,,,,,,
http://purl.obolibrary.org/obo/RBO_00000017,earth surface,,That part of the Earth exposed to the Earth atmosphere.,TRUE,,,,,,,,,,,,,,,,,,,,,,,true|false,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,RBO:00000017,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/rbo.owl,,,,,,,,,earth surface,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,That part of the Earth exposed to the Earth atmosphere.,,,,,,,,
http://purl.obolibrary.org/obo/RBO_00000016,radiation environment,,An environment the occupation of which results in exposure to radiation.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,RBO:00000016,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/rbo.owl,,,,,,,,,radiation environment,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environment the occupation of which results in exposure to radiation.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001453,sequencing protocol name,sequencing protocol name,A data field which describes the name and version number of the sequencing protocol used.,FALSE,,,,,,,PCDS:sequencing_protocol_name,,,,,,,PCDS: Provide the name and version of the sequencing protocol.,,,,,,,,,,,,,,"PCDS: 1D_DNA_MinION, ARTIC Network Protocol V3",,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,sequencing protocol name,sequencing protocol name slot,,,,GENEPIO:0001453,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,sequencing protocol name,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the name and version number of the sequencing protocol used.,,PCDS: The name and version number of the sequencing protocol used.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100079,injection drug abuse,,The use of an injection drug for a reason other than which it was intended or in a manner or in quantities other than directed.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100079,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,injection drug abuse,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The use of an injection drug for a reason other than which it was intended or in a manner or in quantities other than directed.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100487,international worker,,A role inhering in a person that is realized when the bearer is an employee that performs labor internationally.,FALSE,,,,,,,International worker,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100487,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-01-23T00:42:19.315Z,,,,,,,,,,,,,,,,,,,international worker,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A role inhering in a person that is realized when the bearer is an employee that performs labor internationally.,,,,,,,,
http://www.ebi.ac.uk/efo/EFO_0007888,age at voice drop,,"The age of onset of (human) voice drop, the deepening of the voice of adolescents as they reach puberty",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,efo:EFO_0007888,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age at voice drop,,,,,,,,,,,,,,,,,,,,,,,,,,,,Dani Welter,,,,"The age of onset of (human) voice drop, the deepening of the voice of adolescents as they reach puberty",,,,,,,,
http://purl.obolibrary.org/obo/OBI_0002565,adapter-sequence trimming,,A data transformation in which adapter sequences at the end of a molecular sequence are cut (removed).,FALSE,,,,,,,,,,,,,,,,,,,,,Dan Berrios,,,,,adapter-sequence trimming,,,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0002565,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,adapter-sequence trimming,,,,,,,,,,,,,,,,,,,,,,,,,,,,Dan Berrios,,,,A data transformation in which adapter sequences at the end of a molecular sequence are cut (removed).,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0000732,restriction enzyme,,an enzyme that has a specific target cleavage sites within nucleic acids,FALSE,,,,,,,,,,,,,,,,,,,,5/22 Need to explore if there are GO / other classes exist that capture this. We need it now for cloning experiments,,,,,,restriction enzyme,,The enzyme EcoR1 cuts DNA at the canonical cleavage site CAATTG,,,http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0000732,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,restriction enzyme,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Kevin Clancy, Bjoern Peters",,,,an enzyme that has a specific target cleavage sites within nucleic acids,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102149,MGI DNBSEQ-G800,,An MGI DNBSEQ instrument model which utilises DNA nanoball sequencing to deliver long single-end reads with using CoolMPS technology.,FALSE,,,,,,,DNBSEQ-G800,,,,,,,,,,,,,,https://www.completegenomics.com/products/sequencing-platforms/dnbseq-g800/| https://en.mgi-tech.com/products/instruments_info/2/,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102149,,,,,,,,,,,,,https://orcid.org/0000-0002-7654-6902|https://orcid.org/0000-0001-8008-8249,2025-03-21T01:14:47.111Z,,,,,,,,,,,,,,,,,,,MGI DNBSEQ-G800,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An MGI DNBSEQ instrument model which utilises DNA nanoball sequencing to deliver long single-end reads with using CoolMPS technology.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100597,genomic orientation,,A sequence data which is the orientation of a genomic element on a double stranded molecule.,FALSE,,,,,,,strand | strand orientation,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/NCIT_C48673,,,,,genomic orientation,,"The ""123"" gene ORF is oriented in the 5' -> 3' direction on the DNA sense (coding) strand.",,,ready for release,http://purl.obolibrary.org/obo/OBI_0002876,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100597,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,genomic orientation,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-1107-9135,,,https://github.com/obi-ontology/obi/issues/1579,A sequence data which is the orientation of a genomic element on a double stranded molecule.,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000142,Tswana,,A Bantu Southern population with a population size of 15 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000142,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Tswana,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Bantu Southern population with a population size of 15 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000140,Chewa,,A Bantu Eastern population with a population size of 9 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000140,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Chewa,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Bantu Eastern population with a population size of 9 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000148,Kusasi,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000148,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Kusasi,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000147,Dagomba,,A Western African population with a population size of 0.93 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000147,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Dagomba,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Western African population with a population size of 0.93 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000145,Tuareg,,"A Berber Northern, Berber Western population with a population size of 2.5 millions",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000145,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Tuareg,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A Berber Northern, Berber Western population with a population size of 2.5 millions",,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000141,Soninke,,The Soninke are a Mande Western population with a population size of 2 million.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000141,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Soninke,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The Soninke are a Mande Western population with a population size of 2 million.,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000149,Frafra,,A Gurunsi population with a population size of 0.3 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000149,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Frafra,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Gurunsi population with a population size of 0.3 millions,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490376,oriented polypropylene container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0376,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490376,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,oriented polypropylene container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001963,size fractionation method,,Physical selection of size appropriate targets.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI SRA: size fractionation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001963,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,size fractionation method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Physical selection of size appropriate targets.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_13444,glanders,,"A primary bacterial infectious disease that results in septicemic infection, has_material_basis_in Burkholderia mallei, which is transmitted by contact with tissues or body fluids of infected animals, or through mucosal surfaces such as the eyes and nose. The infection has symptom fever, has symptom chills, has symptom sweating, has symptom muscle aches, has symptom chest pain, has symptom muscle tightness, has symptom headache, has symptom mucopurulent nasal discharge, and has symptom nodular lesions in the lungs.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:13444,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,glanders,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A primary bacterial infectious disease that results in septicemic infection, has_material_basis_in Burkholderia mallei, which is transmitted by contact with tissues or body fluids of infected animals, or through mucosal surfaces such as the eyes and nose. The infection has symptom fever, has symptom chills, has symptom sweating, has symptom muscle aches, has symptom chest pain, has symptom muscle tightness, has symptom headache, has symptom mucopurulent nasal discharge, and has symptom nodular lesions in the lungs.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C35773,Bile Duct Stone,Bile Duct Stone|Bile Duct Calculus,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Bile Duct Stone|Bile Duct Calculus,,,,NCIT:C35773,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Bile Duct Stone,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0002129,Illumina HiSeq X Ten,,A DNA sequencer that consists of a set of 10 HiSeq X Sequencing Systems.,FALSE,,,,,,,HiSeq X Ten,,,,,,,,,,,,,,http://www.illumina.com/systems/hiseq-x-sequencing-system/system.html,,,,,Illumina HiSeq X Ten,,,,,http://purl.obolibrary.org/obo/IAO_0000125,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0002129,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Illumina HiSeq X Ten,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Person: Chris Stoeckert, Jason Hilton, Sagar Jain, Richard Scheuermann",,,,A DNA sequencer that consists of a set of 10 HiSeq X Sequencing Systems.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020171,piece of chicken,,A severed part of a chicken.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020171,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of chicken,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A severed part of a chicken.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0001197,Abnormality of prenatal development or birth,Abnormality of prenatal development or birth,"An abnormality of the fetus or the birth of the fetus, excluding structural abnormalities.",FALSE,,,,,,,,,,,,,,"Because of the close link between prenatal developmental abnormalities and abnormalities of the birth process, a single term is chosen to subsume both classes of abnormality.",,,,,,,,,,,,,,,,,,UMLS:C4025797,,,,,,,,,,,,,,,,,,,,,,,,,Abnormality of prenatal development or birth,,,,HP:0001197,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormality of prenatal development or birth,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An abnormality of the fetus or the birth of the fetus, excluding structural abnormalities.",,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000182,odds ratio,,"Odds ratio is a ratio that measures effect size, that is the strength of association between 2 dichotomous variables, one describing an exposure and one describing an outcome.
It represents the odds that an outcome will occur given a particular exposure, compared to the odds of the outcome occurring in the absence of that exposure ( the probability of the event occuring divided by the probability of an event not occurring). The odds ratio is a ratio of describing the strength of association or non-independence between two binary data values by forming the ratio of the odds for the first group and the odds for the second group. Odds ratio are used when one wants to compare the odds of something occurring to two different groups.",FALSE,,,,,,,,,,,,,,,,,,,,,"http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2938757/
http://www.stats.org/stories/2008/odds_ratios_april4_2008.html",,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000182,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,odds ratio,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra|Orlaith Burke|Alejandra Gonzalez-Beltran,,,,"Odds ratio is a ratio that measures effect size, that is the strength of association between 2 dichotomous variables, one describing an exposure and one describing an outcome.
It represents the odds that an outcome will occur given a particular exposure, compared to the odds of the outcome occurring in the absence of that exposure ( the probability of the event occuring divided by the probability of an event not occurring). The odds ratio is a ratio of describing the strength of association or non-independence between two binary data values by forming the ratio of the odds for the first group and the odds for the second group. Odds ratio are used when one wants to compare the odds of something occurring to two different groups.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490148,paperboard container with paper liner,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0148,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490148,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,paperboard container with paper liner,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://www.ebi.ac.uk/efo/EFO_0002091,biological replicate,biological_replicate,A biological replicate is a replicate role that consists of independent biological replicates made from different individual biosamples.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MO:952,,,,,,,,,,,,,,,,,,,,,,,,,biological_replicate,,,,efo:EFO_0002091,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,biological replicate,,,,,,,,,,,,,,,,,,,,,,,,,,,,James Malone,,,,A biological replicate is a replicate role that consists of independent biological replicates made from different individual biosamples.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100794,total suspended solids measurement,total suspended solids (TSS) measurement value,"An environmental data field which describes the mass of suspended particulates, both organic and inorganic in a sample.",FALSE,,,,,,,PCDS:total_suspended_solids_tss_measurement_value,,,,,,,PCDS: Provide the numerical value of the measured TSS.,,,,,,,,,,,,,,PCDS: 8,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,total suspended solids (TSS) measurement value,total suspended solids (TSS) measurement value slot,,,,GENEPIO:0100794,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-21T01:14:47.111Z,,,,,,,,,,,,,,,,,,,total suspended solids measurement,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An environmental data field which describes the mass of suspended particulates, both organic and inorganic in a sample.",,PCDS: The numerical value from a total suspended solids (TSS) test.,,,,,,
http://purl.obolibrary.org/obo/GAZ_00009461,Province (Afghanistan),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00009461,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Province (Afghanistan),http://purl.obolibrary.org/obo/GAZ_00006882,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00009465,Province (Mongolia),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00009465,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Province (Mongolia),http://purl.obolibrary.org/obo/GAZ_00008744,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510040,reduced fat food,,Food containing at least 25% less fat per amount customarily consumed from the fat content of a comparable food product. The comparable food may not be 'low fat'.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0040,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510040,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,reduced fat food,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Food containing at least 25% less fat per amount customarily consumed from the fat content of a comparable food product. The comparable food may not be 'low fat'.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00008678,"populated place, Lebanon",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00008678,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Lebanon",http://purl.obolibrary.org/obo/GAZ_00002478,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000923,petting zoo,petting farm,A petting zoo is a zoological garden which contains domesticated non-human animals and some wild non-human animals that are docile enough for humans to touch and feed.,FALSE,,,,,,,,,,,,,,"Petting zoos are often nested within a zoological garden featuring wild non-human animals, not docile enough for humans to touch.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,petting farm,,,,ENVO:01000923,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,petting zoo,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A petting zoo is a zoological garden which contains domesticated non-human animals and some wild non-human animals that are docile enough for humans to touch and feed.,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0021166,inflammatory disease,inflammatory disorder|inflammatory disease|inflammation of anatomical structure|anatomical structure inflammation,A disease involving a pathogenic inflammatory response in the anatomical structure.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C1290884|SCTID:128139000|NCIT:C93210|MEDGEN:452939|ICD9:799.89,,,,,,,,,,,,,,,,,,,,,,,,,inflammatory disorder|inflammatory disease|inflammation of anatomical structure|anatomical structure inflammation,,,,MONDO:0021166,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#rare_grouping|http://purl.oboInOwllibrary.org/oboInOwl/mondo#harrisons_view,,,,,,,,inflammatory disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A disease involving a pathogenic inflammatory response in the anatomical structure.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02010017,animal fillet (raw),,A raw animal fillet cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02010017,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,animal fillet (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw animal fillet cut.,,,,,,,,
http://purl.obolibrary.org/obo/PATO_0001323,area,,A 2-D extent quality inhering in a bearer by virtue of the bearer's two dimensional extent.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PATO:0001323,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/pato.owl,http://purl.oboInOwllibrary.org/oboInOwl/pato#scalar_slim|http://purl.oboInOwllibrary.org/oboInOwl/pato#mpath_slim|http://purl.oboInOwllibrary.org/oboInOwl/pato#attribute_slim,,,,,,,,area,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A 2-D extent quality inhering in a bearer by virtue of the bearer's two dimensional extent.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000029,collection depth datum,,Please refer to the definitions of depth in the environmental packages,FALSE,,,,,,,,,,,,,,,,,,,,,GROUP: MIxS,,,,,,,value (5m),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000029,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,,,,,,,collection depth datum,,,,,Environmental Isolate,,,,,,,,,,,,,,,,,,,,,,Geographic location depth,,,GROUP: MIxS,,Please refer to the definitions of depth in the environmental packages,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C117720,Female Reproductive System Finding,Female Reproductive System Finding,"Symptoms, physical examination results, and/or laboratory test results related to the female reproductive system.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Female Reproductive System Finding,,,,NCIT:C117720,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Female Reproductive System Finding,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Symptoms, physical examination results, and/or laboratory test results related to the female reproductive system.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C16203,Clinical or Research Activity,Clinical or Research Activity,Any specific activity undertaken during the course of a clinical study or research protocol.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Clinical or Research Activity,,,,NCIT:C16203,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Clinical or Research Activity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any specific activity undertaken during the course of a clinical study or research protocol.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_55374,oxazolidinone,,An oxazolidine containing one or more oxo groups.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:55374,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,oxazolidinone,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An oxazolidine containing one or more oxo groups.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490346,impregnated/micro waxed paper,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0346,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490346,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,impregnated/micro waxed paper,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00010483,environmental material,portion of environmental material,A material entity which other material entities in an environmental system are primarily or partially composed of.,FALSE,,,,,,,,,,,,,,"Instances of this class are portions of environmental materials, such as seawater in bucket, a water parcel in the photic zone of a lake, or the concrete that composes a building part. Instances of these portions may have fiat or non-fiat boundaries. For example, a water parcel has not physical boundaries, while the seawater in a bucket is bounded by the internal surfaces of the bucket.|Everything under this parent must be a mass noun (i.e. not countable). All subclasses are to be understood as being composed primarily of the named entity, rather than restricted to that entity. For example, ""ENVO:water"" is to be understood as ""environmental material composed primarly of some CHEBI:water"".",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,portion of environmental material,,,,ENVO:00010483,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,environmental material,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A material entity which other material entities in an environmental system are primarily or partially composed of.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02021032,buffalo retail cut (raw),,A raw buffalo retail cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02021032,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,buffalo retail cut (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw buffalo retail cut.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100115,Illumina HiSeq 1500,,"A DNA sequencer which is manufactured by the Illumina corporation, with a single flow cell and a throughput of up to 35-50 Gb per day.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100115,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,Illumina HiSeq 1500,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A DNA sequencer which is manufactured by the Illumina corporation, with a single flow cell and a throughput of up to 35-50 Gb per day.",,,,,,,,
http://purl.obolibrary.org/obo/HP_0025439,Pharyngitis,,Inflammation (due to infection or irritation) of the pharynx.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0025439,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Pharyngitis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Inflammation (due to infection or irritation) of the pharynx.,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0045024,cancer or benign tumor,neoplasm,"Any disorder that features disrupted cell proliferation. Includes hyperplasia, neoplastic syndrome and isolated neoplasm diseases as well as precancerous conditions.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,neoplasm,,,MONDO:0045024,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#rare_grouping|http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar|http://purl.oboInOwllibrary.org/oboInOwl/mondo#harrisons_view,,,,,,,,cancer or benign tumor,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Any disorder that features disrupted cell proliferation. Includes hyperplasia, neoplastic syndrome and isolated neoplasm diseases as well as precancerous conditions.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000045,beef chuck,,A beef cut that extends from the neck to the fifth rib and includes the shoulder blade and upper arm.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000045,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef chuck,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A beef cut that extends from the neck to the fifth rib and includes the shoulder blade and upper arm.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_03501130,school building,school,An institutional building in which students are educated.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,school,,,,,ENVO:03501130,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,school building,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An institutional building in which students are educated.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001902,unordered set,,An unordered set is a set of elements which have no intrinsic (semantic) order with respect to each other. The set of all living people is not intrinsically ordered; an ordering can only be provided by looking at some partiular feature of the given set elements.,FALSE,,,,,,,,,,,,,,"The set can have a very large or infinite (open-ended) number of values.  
Because the elements are essentially open-ended, we can only offer a lookup-as-you-type function for selecting past-used items.

Use ""Categorical"" for unordered sets where items are finite, pre-defined and not too numerous.

Strings are only indirectly ordered insofar as strings can be sorted by character - but this requires picking apar the name strings, an examination which has no inherent semantic relation to the things being named.  That one email address or name comes before another is arbitrary.  Only numbers are directly ordered.",,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001902,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,unordered set,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,An unordered set is a set of elements which have no intrinsic (semantic) order with respect to each other. The set of all living people is not intrinsically ordered; an ordering can only be provided by looking at some partiular feature of the given set elements.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001616,subject identifier,,"A subject identifier is an identifier of a subject organism within the context of a particular investigation, study, or specimen extraction event.",FALSE,,,,,,,,,,,,,,"This varies in its type (numeric or string) and its central repository depending on its context (use in a particular application/instance).

Note: GSCID-BRC specification states "" 'Host' is not the preferred term since some specimens may lack any detectable pathogen"". In other words, a person would technically (logically) only have a host identifier AFTER they have been diagnosed as having a pathogen.  A health care personal identifier, or a case identifier would be better than a more ephemeral ""host id""",,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001616,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,subject identifier,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"A subject identifier is an identifier of a subject organism within the context of a particular investigation, study, or specimen extraction event.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C77683,Incision Site,"SITE, SURGICAL|Incision Site",The anatomic site of a cut made during surgery. The term may also refer to the resultant scar from the surgical procedure.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"SITE, SURGICAL|Incision Site",,,,NCIT:C77683,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Incision Site,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The anatomic site of a cut made during surgery. The term may also refer to the resultant scar from the surgical procedure.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_02000609,Special Territory (Indonesia),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:02000609,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Special Territory (Indonesia),http://purl.obolibrary.org/obo/GAZ_00003727,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HP_0025145,Rigors,Rigours,Severe chills with violent shivering. A rigor is an episode of shaking or exaggerated shivering which can occur with a high fever.,FALSE,,,,,,,,,,,,,,"A sudden attack of severe shivering accompanied by chills (a feeling of coldness) is called a rigor and may be associated with a marked rise in body temperature. Patients often describe rigors as an attack of uncontrollable shaking. Rigors are often a sign of infection, particularly bacterial infection.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Rigours,,,,HP:0025145,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Rigors,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Severe chills with violent shivering. A rigor is an episode of shaking or exaggerated shivering which can occur with a high fever.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0025142,Constitutional symptom,,A symptom or manifestation indicating a systemic or general effect of a disease and that may affect the general well-being or status of an individual.,FALSE,,,,,,,,,,,,,,"Note that we use the preferred term label constitutional symptom because this reflects common usage, but we do not restrict the term or its descendents to the narrow meaning of symptom, i.e., a complaint related by a patient to a physician. There is no generally accepted classification of what defines a constitutional symptom, but examples include weight loss, fatigue, general weakness, night sweats, shaking, chills, fever, and vomiting.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0025142,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Constitutional symptom,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A symptom or manifestation indicating a systemic or general effect of a disease and that may affect the general well-being or status of an individual.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0025143,Chills,Chills,A sudden sensation of feeling cold.,FALSE,,,,,,,,,,,,,,"The word chills can also refer to an episode of shivering, accompanied by paleness and feeling cold.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Chills,,,,HP:0025143,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Chills,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A sudden sensation of feeling cold.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0025144,Shivering,Shuddering|Shivering,Involuntary contraction or twitching of the muscles.,FALSE,,,,,,,,,,,,,,"Shivering is a physiologic method of heat production in man and other mammals. Shivering is a bodily function in response to fever, early hypothermia or feeling cold.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Shuddering|Shivering,,,,HP:0025144,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Shivering,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Involuntary contraction or twitching of the muscles.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000303,"pork sirloin chop (boneless, raw)",,A raw and boneless pork sirloin chop.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000303,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"pork sirloin chop (boneless, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw and boneless pork sirloin chop.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C16632,Geographic Area,Region|Geographic Region|Geographic Location|Geographic Area|Area,Any demarcated area of the Earth; may be determined by both natural and human boundaries.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Region|Geographic Region|Geographic Location|Geographic Area|Area,,,,NCIT:C16632,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Geographic Area,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any demarcated area of the Earth; may be determined by both natural and human boundaries.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490257,seal/gasket,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0257,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490257,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,seal/gasket,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001704,textual test result,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001704,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,textual test result,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://www.ebi.ac.uk/efo/EFO_0021784,age at initiation of smoking,,"Age of initation of the habit of smoking, the inhaling and exhaling of tobacco smoke.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,efo:EFO_0021784,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age at initiation of smoking,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Age of initation of the habit of smoking, the inhaling and exhaling of tobacco smoke.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00004331,plant material,,Anatomical or other piece(s) or substance derived from one or more plants.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00004331,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,plant material,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Anatomical or other piece(s) or substance derived from one or more plants.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100848,artic-v2 strategy,,An amplicon strategy which was developed by the ARTIC consortium for SARS-CoV-2 with the attributes of version 2.0.0.,FALSE,,,,,,,artic-v2|artic v2,,,,,,,,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100848,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2026-04-13T19:52:38.515Z,,,,,,,,,,,,,,,,,,,artic-v2 strategy,,,,,,,,,,,,,,,,,,,,,,https://www.protocols.io/view/ncov-2019-sequencing-protocol-v2-bp2l6n26rgqe/v2,,,,,,,,,,An amplicon strategy which was developed by the ARTIC consortium for SARS-CoV-2 with the attributes of version 2.0.0.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001819,NCIT,,"The National Cancer Institute Thesaurus (NCIt) provides reference terminology for many NCI and other systems. It covers vocabulary for clinical care, translational and basic research, and public information and administrative activities.",FALSE,,,,,,,National Cancer Institude Thesaurus,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000120,NCIt|NCI_Thesaurus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001819,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCIT,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,https://ncit.nci.nih.gov/ncitbrowser/,,"The National Cancer Institute Thesaurus (NCIt) provides reference terminology for many NCI and other systems. It covers vocabulary for clinical care, translational and basic research, and public information and administrative activities.",,,,,,,,
http://purl.obolibrary.org/obo/HP_0003621,Juvenile onset,Signs and symptoms begin before 15 years of age,Onset of signs or symptoms of disease between the age of 5 and 15 years.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4025588,,,,,,,,,,,,,,,,,,,,,,,HP:0003670|HP:0003661|HP:0003659|HP:0003625|HP:0003620|HP:0003619|HP:0003604|HP:0003592|HP:0003589|HP:0003583|HP:0003582|HP:0003580|HP:0003578,,Signs and symptoms begin before 15 years of age,,,,HP:0003621,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,Juvenile onset,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Onset of signs or symptoms of disease between the age of 5 and 15 years.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0003623,Neonatal onset,Onset in neonatal period|Onset in first weeks of life|Neonatal onset,Onset of signs or symptoms of disease within the first 28 days of life.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C1855106,,,,,,,,,,,,,,,,,,,,,,,HP:0003622,,Onset in neonatal period|Onset in first weeks of life|Neonatal onset,,,,HP:0003623,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,Neonatal onset,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Onset of signs or symptoms of disease within the first 28 days of life.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510270,Navajo food claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0270,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510270,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,Navajo food claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470142,chilling or freezing,,"Preservation by cooling and storage at low temperature (chilling at around 0-5°C (32 to 41°F), freezing at -18°C (0°F))  to prevent or retard microbial or enzymatic spoilage.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0142,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470142,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,chilling or freezing,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Preservation by cooling and storage at low temperature (chilling at around 0-5°C (32 to 41°F), freezing at -18°C (0°F))  to prevent or retard microbial or enzymatic spoilage.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001150,sample collection and processing field category,PCDS:sample collection and processing,A data field category which refers to sample collection and processing information fields.,FALSE,,,,,,,PCDS:sample_collection_and_processing_slot_group,,,,,,,,,,,,,,,,,,,,,,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,PCDS:sample collection and processing,sample collection and processing slot category,,,,GENEPIO:0001150,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,sample collection and processing field category,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field category which refers to sample collection and processing information fields.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001420,diagnostic test,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001420,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,diagnostic test,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100944,vacuum sludge sampling device,,A grab sampler that takes a sample at a designated depth with minimal disturbance to surrounding layers.,FALSE,,,,,,,vacuum sludge sampler,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100944,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-11-20T16:24:25Z,,,,,,,,,,,,,,,,,,,vacuum sludge sampling device,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A grab sampler that takes a sample at a designated depth with minimal disturbance to surrounding layers.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_4962,pericardial tuberculosis,,"An extrapulmonary tuberculosis that is located_in pericardium resulting in acute pericarditis, chronic pericardial effusion, cardiac tamponade or pericardial constriction.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:4962,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,pericardial tuberculosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An extrapulmonary tuberculosis that is located_in pericardium resulting in acute pericarditis, chronic pericardial effusion, cardiac tamponade or pericardial constriction.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490178,wood drum,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0178,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490178,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,wood drum,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HP_0000224,Hypogeusia,Decreased taste sensation|Decreased taste,A decreased ability to perceive flavor.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0151934|SNOMEDCT_US:697990000,,,,,,,,,,,,,,,,,,,,,,,,,Decreased taste sensation|Decreased taste,,,,HP:0000224,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Hypogeusia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A decreased ability to perceive flavor.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0000223,Abnormality of taste sensation,Abnormality of taste sensation,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4025879,,,,,,,,,,,,,,,,,,,,,,,,,Abnormality of taste sensation,,,,HP:0000223,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormality of taste sensation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00002263,garden soil,,A portion of soil which is found in a garden.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00002263,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,garden soil,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A portion of soil which is found in a garden.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0012718,Abnormal gastrointestinal tract morphology,Morphological anomaly of the digestive system|Morphological abnormality of the gastrointestinal tract|Morphological abnormality of the GI tract|Abnormal shape of the digestive system,Abnormal structure of the gastrointestinal tract.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4021073,,,,,,,,,,,,,,,,,,,,,,,,,Morphological anomaly of the digestive system|Morphological abnormality of the gastrointestinal tract|Morphological abnormality of the GI tract|Abnormal shape of the digestive system,,,,HP:0012718,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal gastrointestinal tract morphology,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Abnormal structure of the gastrointestinal tract.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0012719,Functional abnormality of the gastrointestinal tract,GI dysfunction|Functional abnormality of the GI tract,Abnormal functionality of the gastrointestinal tract.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4022755,,,,,,,,,,,,,,,,,,,,,,,,,GI dysfunction|Functional abnormality of the GI tract,,,,HP:0012719,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Functional abnormality of the gastrointestinal tract,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Abnormal functionality of the gastrointestinal tract.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510267,Native American food claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0267,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510267,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,Native American food claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001561,assembly genome size,,The assembly genome size is the sum of all lengths of a sequence assembly's contigs.,FALSE,,,,,,,,,,,,,,"As noted in Quast documentation: "" The total assembly size may increase (and in some cases exceeds the genome size) due to contaminants (see Chitsaz et al. (2011)), misassembled contigs, repeats, and hubs that contribute to multiple contigs. """,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,http://purl.obolibrary.org/obo/UO_0000244,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001561,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,,,,,,,assembly genome size,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,The assembly genome size is the sum of all lengths of a sequence assembly's contigs.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000252,freshwater lake biome,,A biome which is determined by a freshwater lake.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01000252,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,freshwater lake biome,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A biome which is determined by a freshwater lake.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510055,energy free food claim,,"A claim that a food is energy-free, and any claim likely to have the same meaning for the consumer, may only be made where the product does not contain more than 4 kcal (17 kJ)/100 ml. For table-top sweeteners the limit of 0.4 kcal (1.7 kJ)/portion, with equivalent sweetening properties to 6 g of sucrose (approximately 1 teaspoon of sucrose), applies [REGULATION (EC) No 1924/2006 Corrigendum 2007-01-18].

Food having less than 5 calories per amount customarily consumed. Calorie amount is not defined for meals or main dishes [US FDA]",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0055,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510055,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,energy free food claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A claim that a food is energy-free, and any claim likely to have the same meaning for the consumer, may only be made where the product does not contain more than 4 kcal (17 kJ)/100 ml. For table-top sweeteners the limit of 0.4 kcal (1.7 kJ)/portion, with equivalent sweetening properties to 6 g of sucrose (approximately 1 teaspoon of sucrose), applies [REGULATION (EC) No 1924/2006 Corrigendum 2007-01-18].

Food having less than 5 calories per amount customarily consumed. Calorie amount is not defined for meals or main dishes [US FDA]",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000187,beef plate short rib,,A beef cut that is usually taken from the flat end of ribs 6 through 9.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000187,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef plate short rib,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A beef cut that is usually taken from the flat end of ribs 6 through 9.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100118,obsolete: Illumina HiSeq 3000,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,Rehomed in OBI,,,,,,,,,,,,,,,,,,,GENEPIO:0100118,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: Illumina HiSeq 3000,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/OBI_0002048,,,,,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000627,odds,,"odds correspond to a ratio in which the numerator represents the probability that an event will occur and the denominator represents the probability that an event will not occur.

'Odds' and 'Odds ratio' are different terms. 'Odds' is a ratio of probabilities. 'Odds ratio' is a ratio of two different odds.

Odds are calculated as p / (1-p) where p is the probability of event occurrence.  When p = 0, the odds = 0. When p = 1, the odds may be expressed as not calculable or as ""odds against = 0"".

Odds may be expressed as p:(1-p). Odds may be expressed as p:q where q = 1-p. Odds may be expressed as a:b where a and b are multiples of p and (1-p). Examples of different expressions of the same odds include 3:2, 3/2, 0.6:0.4, 0.6/0.4, and 1.5.

Odds may be expressed as ""odds for"" or ""odds in favor"" (e.g. 1:5 for a ""3"" on a 6-sided die) or ""odds against"" (e.g. 5:1 against a ""3"" on a 6-sided die).

The term ""betting odds"" used in gambling that involves financial amounts in the formulation is not an ""Odds"" in the definition of the Scientific Evidence Code System.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000627,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,odds,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Brian S. Alper, Harold Lehmann, Joanne Dehnbostel, Khalid Shahin, Kenneth Wilkins, Muhammad Afzal",,,,"odds correspond to a ratio in which the numerator represents the probability that an event will occur and the denominator represents the probability that an event will not occur.

'Odds' and 'Odds ratio' are different terms. 'Odds' is a ratio of probabilities. 'Odds ratio' is a ratio of two different odds.

Odds are calculated as p / (1-p) where p is the probability of event occurrence.  When p = 0, the odds = 0. When p = 1, the odds may be expressed as not calculable or as ""odds against = 0"".

Odds may be expressed as p:(1-p). Odds may be expressed as p:q where q = 1-p. Odds may be expressed as a:b where a and b are multiples of p and (1-p). Examples of different expressions of the same odds include 3:2, 3/2, 0.6:0.4, 0.6/0.4, and 1.5.

Odds may be expressed as ""odds for"" or ""odds in favor"" (e.g. 1:5 for a ""3"" on a 6-sided die) or ""odds against"" (e.g. 5:1 against a ""3"" on a 6-sided die).

The term ""betting odds"" used in gambling that involves financial amounts in the formulation is not an ""Odds"" in the definition of the Scientific Evidence Code System.",,,,,,,,
http://purl.obolibrary.org/obo/HP_0001063,Acrocyanosis,Persistent blue colour of hands or feet|Persistent blue color of hands or feet,Bluish discoloration of the skin of the hands or feet.,FALSE,,,,,,,,,,,,,,Cyanosis is caused by increased levels of deoxygenated hemoglobin.,,,,,,,,,,,,,,,,,,UMLS:C0221347|SNOMEDCT_US:25003006,,,,,,,,,,,,,,,,,,,,,,,,,Persistent blue colour of hands or feet|Persistent blue color of hands or feet,,,,HP:0001063,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Acrocyanosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Bluish discoloration of the skin of the hands or feet.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_27136,triol,,A chemical compound containing three hydroxy groups.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:27136,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,triol,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A chemical compound containing three hydroxy groups.,,,,,,,,
http://purl.obolibrary.org/obo/GO_0007610,behavior,behavioural response to stimulus|behaviour|behavioral response to stimulus,"The internally coordinated responses (actions or inactions) of animals (individuals or groups) to internal or external stimuli, via a mechanism that involves nervous system activity.",FALSE,,,,,,,,,,,,,,"1. Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation reviews.
2. While a broader definition of behavior encompassing plants and single cell organisms would be justified on the basis of some usage (see PMID:20160973 for discussion), GO uses a tight definition that limits behavior to animals and to responses involving the nervous system, excluding plant responses that GO classifies under development, and responses of unicellular organisms that has general classifications for covering the responses of cells in multicellular organisms (e.g. cell chemotaxis).",,,,,,,,,,,,,,,,,,Wikipedia:Behavior|NCIt:C16326|MESH:D001519|GO:0007610,,,,,,,,,,,,,,,,,,,,,,,GO:0044709|GO:0044708|GO:0023032,,behavioural response to stimulus|behaviour|behavioral response to stimulus,,,,GO:0007610,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl|http://purl.obolibrary.org/obo/pco.owl|http://purl.obolibrary.org/obo/nbo.owl,http://purl.oboInOwllibrary.org/oboInOwl/go#goslim_flybase_ribbon|http://purl.oboInOwllibrary.org/oboInOwl/go#goslim_agr|http://purl.oboInOwllibrary.org/oboInOwl/go#gocheck_do_not_manually_annotate,,,,,,,,behavior,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The internally coordinated responses (actions or inactions) of animals (individuals or groups) to internal or external stimuli, via a mechanism that involves nervous system activity.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100934,soil coring,,A specimen collection process that is used to collect soil sample cores.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100934,,,,,,,,,,,,,https://orcid.org/0000-0001-5275-8866,2023-11-29T11:47:51Z,,,,,,,,,,,,,,,,,,,soil coring,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A specimen collection process that is used to collect soil sample cores.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100784,dissolved oxygen measurement unit,dissolved oxygen measurement unit,An environmental data field which describes the units of a measurement of dissolved oxygen.,FALSE,,,,,,,PCDS:dissolved_oxygen_measurement_unit,,,,,,,PCDS: Provide the units of the measured dissolved oxygen by selecting a value from the pick list.,,,,,,,,,,,,,,PCDS: part per million (ppm),,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,dissolved oxygen measurement unit,dissolved oxygen measurement unit slot,,,,GENEPIO:0100784,,,,,,,,,,,,,,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,dissolved oxygen measurement unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the units of a measurement of dissolved oxygen.,,PCDS: The units of a measurement of dissolved oxygen.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001559,outbreak identifier,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PulseNet: Outbreak,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001559,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,outbreak identifier,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100049,subject age at time of specimen collection bin (0 - 9),,An age group that stratifies the age of a case to be between 0 to 9 years old (inclusive).,FALSE,,,,,,,0 - 9,,,,,,,,,,,,,,,,,,,,,,,,ready for release,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100049,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,subject age at time of specimen collection bin (0 - 9),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An age group that stratifies the age of a case to be between 0 to 9 years old (inclusive).,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00003693,South East Region,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00003693,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,South East Region,http://purl.obolibrary.org/obo/GAZ_00002641,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00003691,East Midlands Region,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00003691,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,East Midlands Region,http://purl.obolibrary.org/obo/GAZ_00002641,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00003690,West Midlands Region,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00003690,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,West Midlands Region,http://purl.obolibrary.org/obo/GAZ_00002641,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00003692,East Region,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00003692,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,East Region,http://purl.obolibrary.org/obo/GAZ_00002641,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_14095,boutonneuse fever,,"A spotted fever that has_material_basis_in Rickettsia conorii subsp conorii, which is transmitted_by dog tick (Rhipicephalus sanguineus). The infection has_symptom fever, has_symptom eschar (usually single), has_symptom regional adenopathy, has_symptom maculopapular rash on extremities.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:14095,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,boutonneuse fever,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A spotted fever that has_material_basis_in Rickettsia conorii subsp conorii, which is transmitted_by dog tick (Rhipicephalus sanguineus). The infection has_symptom fever, has_symptom eschar (usually single), has_symptom regional adenopathy, has_symptom maculopapular rash on extremities.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020471,"piece of turkey meat (with bone, raw)",,A raw piece of turkey meat that contains bone material.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020471,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"piece of turkey meat (with bone, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw piece of turkey meat that contains bone material.,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_1549675,Galloanserae,,,FALSE,,,,,,,"ducks, geese, chickens, fowl, quail, currasows and allies",,,,,,,,,,,,,,,,,,,Galloanserae,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:1549675,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Galloanserae,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530120,street vendor food retail process,,The process of sourcing and selling food at a street vending establishment.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530120,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,street vendor food retail process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The process of sourcing and selling food at a street vending establishment.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03460778,chromium added claim,,A claim that chromium has been added to an edible product.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=H0778,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03460778,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,chromium added claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A claim that chromium has been added to an edible product.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_29007,ceftriaxone,,"A third-generation cephalosporin compound having 2-(2-amino-1,3-thiazol-4-yl)-2-(methoxyimino)acetylamino and [(2-methyl-5,6-dioxo-1,2,5,6-tetrahydro-1,2,4-triazin-3-yl)sulfanyl]methyl side-groups.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:446214|CHEBI:3513|CHEBI:23059,,,,,,CHEBI:29007,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,ceftriaxone,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A third-generation cephalosporin compound having 2-(2-amino-1,3-thiazol-4-yl)-2-(methoxyimino)acetylamino and [(2-methyl-5,6-dioxo-1,2,5,6-tetrahydro-1,2,4-triazin-3-yl)sulfanyl]methyl side-groups.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490416,polyamide textile container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0416,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490416,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,polyamide textile container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_2914,immune system disease,,A disease of anatomical entity that is located_in the immune system.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:2914,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,immune system disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A disease of anatomical entity that is located_in the immune system.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00004665,Province (Sri Lanka),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00004665,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Province (Sri Lanka),http://purl.obolibrary.org/obo/GAZ_00003924,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/IDO_0000659,susceptible organism,,An organism that is not infected with an infectious agent and lacks protective immunity to the infectious agent.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,IDO:0000659,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ido.owl,,,,,,,,,susceptible organism,,,,,,,,,,,,,,,,,,,,,,,,,,,,Lindsay Cowell|Alex Diehl,,,,An organism that is not infected with an infectious agent and lacks protective immunity to the infectious agent.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00003968,air filter,,An air filter is a device that removes some substance from air.,FALSE,,,,,,,,,,,,,,"This is a general definition derived from the definitions for particulate, chemical, and other air filters. Subclasses should be created if needed.",,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Air_filter,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00003968,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,air filter,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An air filter is a device that removes some substance from air.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001454,sequencing protocol,sequencing_protocol|sequencing protocol,A data field which describes the protocol used to generate the sequence.,FALSE,,,,,,,PCDS:sequencing_protocol,,,,,,,PCDS: Provide the name and version of the procedure or protocol used for sequencing. You can also provide a link to a protocol online.,,,,,,,,,,,,,,PCDS: https://www.protocols.io/view/ncov-2019-sequencing-protocol-bbmuik6w?version_warning=no,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,sequencing_protocol|sequencing protocol,sequencing protocol slot,,,,GENEPIO:0001454,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,sequencing protocol,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the protocol used to generate the sequence.,,PCDS: The protocol used to generate the sequence.,,,,,,
http://purl.obolibrary.org/obo/PATO_0000051,morphology,,A quality of a single physical entity inhering in the bearer by virtue of the bearer's size or shape or structure.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PATO:0000051,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/pato.owl,http://purl.oboInOwllibrary.org/oboInOwl/pato#attribute_slim,,,,,,,,morphology,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A quality of a single physical entity inhering in the bearer by virtue of the bearer's size or shape or structure.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03450020,cooking by simmering,,Cooking in a moderate amount of liquid at just below the boiling point.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=G0020,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03450020,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,cooking by simmering,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Cooking in a moderate amount of liquid at just below the boiling point.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01001483,surface of an astronomical body,,A surface layer where the solid or liquid material of an astronomical body comes into contact with an atmosphere or outer space.,FALSE,,,,,,,,,,,,,,a useful class: this can be used to define sub-terrestrial and sub-marine entities,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01001483,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,surface of an astronomical body,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A surface layer where the solid or liquid material of an astronomical body comes into contact with an atmosphere or outer space.,,,,,,,,
http://purl.obolibrary.org/obo/APOLLO_SV_00000168,nursery school student population census,,Motivating use case is Synthia synthetic population data.,FALSE,,,,,,,,,,,,,,Motivating use case is Synthia synthetic population data.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,APOLLO_SV:00000168,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/apollo_sv.owl,,,,,,,,,nursery school student population census,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/APOLLO_SV_00000169,primary school student population census,,Motivating use case is Synthia synthetic population data.,FALSE,,,,,,,,,,,,,,Motivating use case is Synthia synthetic population data.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,APOLLO_SV:00000169,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/apollo_sv.owl,,,,,,,,,primary school student population census,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002015,isolate preparation facility,,An isolate preparation facility is a type of organization that provides the service of isolating organisms of interest from provided specimens.,FALSE,,,,,,,,,,,,,,An isolate preparation facility is a type of organization that provides the service of isolating organisms of interest from provided specimens.,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002015,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,isolate preparation facility,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020839,bison material,,Material that derives from some bison.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020839,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,bison material,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Material that derives from some bison.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001983,FL-cDNA strategy,,Full-length sequencing of cDNA templates,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI SRA: FL-cDNA,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001983,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FL-cDNA strategy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Full-length sequencing of cDNA templates,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0001046,hindgut,,The caudalmost subdivision of a digestive tract.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,XAO:0000104|Wikipedia:Hindgut|VHOG:0000459|UMLS:C0231053|TGMA:0001020|SCTID:362856002|NCIT:C34188|MA:0001527|FMA:45618|FBbt:00005384|EMAPA:16715|EHDAA:975|EHDAA2:0000779|BTO:0000510|BILA:0000087|AAO:0011052,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0001046,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,hindgut,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The caudalmost subdivision of a digestive tract.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0001045,midgut,,"Middle subdivision of a digestive tract[CJM]. In vertebrates: The middle part of the alimentary canal from the stomach, or entrance of the bile duct, to, or including, the large intestine[GO].",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,XAO:0000103|Wikipedia:Midgut|VHOG:0000290|UMLS:C0231052|TGMA:0001036|SCTID:361410004|NCIT:C34210|MA:0001564|FMA:45617|FBbt:00005383|EMAPA:16255|EHDAA:983|EHDAA2:0001185|EFO:0001950|BTO:0000863|BILA:0000086,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0001045,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,midgut,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Middle subdivision of a digestive tract[CJM]. In vertebrates: The middle part of the alimentary canal from the stomach, or entrance of the bile duct, to, or including, the large intestine[GO].",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0001043,esophagus,oesophagus|gullet,"Tube that connects the pharynx to the stomach. In mammals, the oesophagus connects the buccal cavity with the stomach. The stratified squamous non-keratinised epithelium lining the buccal cavity is continued through the pharynx down into the oesophagus. The lowest part of the oesophagus (ca. 2 cm) is lined with gastric mucosa and covered by peritoneum. The main body of the oesophagus is lined with small, simple mucous glands. Each gland opens into the lumen by a long duct which pierces the muscularis mucosae (Wilson and Washington, 1989). A sphincter is situated at the point where the oesophagus enters the stomach to prevent gastro-oesophageal reflux, i.e. to prevent acidic gastric contents from reaching stratified epithelia of the oesophagus, where they can cause inflammation and irritation (Wilson and Washington, 1989; Brown et al., 1993).",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:Esophagus|ZFA:0000204|XAO:0000127|Wikipedia:Esophagus|VHOG:0000450|UMLS:C0014876|TAO:0000204|SCTID:181245004|NCIT:C12389|MIAA:0000048|MESH:D004947|MAT:0000048|MA:0000352|GAID:291|FMA:7131|EV:0100069|EMAPA:16833|EHDAA:2937|EHDAA2:0001285|EFO:0000835|CALOHA:TS-0700|BTO:0000959|ANISEED:1235301|AAO:0000145,,,,,,,,,,,,,,,,,,,,,,,,,oesophagus|gullet,,,,UBERON:0001043,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,esophagus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Tube that connects the pharynx to the stomach. In mammals, the oesophagus connects the buccal cavity with the stomach. The stratified squamous non-keratinised epithelium lining the buccal cavity is continued through the pharynx down into the oesophagus. The lowest part of the oesophagus (ca. 2 cm) is lined with gastric mucosa and covered by peritoneum. The main body of the oesophagus is lined with small, simple mucous glands. Each gland opens into the lumen by a long duct which pierces the muscularis mucosae (Wilson and Washington, 1989). A sphincter is situated at the point where the oesophagus enters the stomach to prevent gastro-oesophageal reflux, i.e. to prevent acidic gastric contents from reaching stratified epithelia of the oesophagus, where they can cause inflammation and irritation (Wilson and Washington, 1989; Brown et al., 1993).",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0001042,chordate pharynx,pharynx,A portion of the respiratory and digestive tracts; its distal limit is the superior part of the esophagus and it connects the nasal and oral cavities with the esophagus and larynx; it contains the valleculae and the pyriform recesses; its upper limits are the nasal cavity and cranial base.[FEED].,FALSE,,,,,,,,,,,,,,Consider generalizing to deuterostome pharynx,,,,,,,,,,,,,,,,,,galen:Pharynx|ZFA:0000056|XAO:0003227|Wikipedia:Pharynx|VHOG:0000462|UMLS:C0031354|TAO:0000056|SCTID:181211006|NCIT:C12425|MESH:D010614|MA:0000432|GAID:155|FMA:46688|EV:0100065|EMAPA:16706|EHDAA:2947|EHDAA2:0001458|EFO:0000836|CALOHA:TS-0785|BTO:0001049|AAO:0000967,,,,,,,,,,,,,,,,,,,,,,,,pharynx,,,,,UBERON:0001042,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,chordate pharynx,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A portion of the respiratory and digestive tracts; its distal limit is the superior part of the esophagus and it connects the nasal and oral cavities with the esophagus and larynx; it contains the valleculae and the pyriform recesses; its upper limits are the nasal cavity and cranial base.[FEED].,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0001041,foregut,,Anterior subdivision of a digestive tract.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,XAO:0000232|Wikipedia:Foregut|VHOG:0000285|UMLS:C0231051|TGMA:0001014|SCTID:361409009|NCIT:C34180|MA:0001526|FMA:45616|FBbt:00005379|EMAPA:16548|EHDAA:520|EHDAA2:0000557|BTO:0000507|BILA:0000085|AAO:0011042,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0001041,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,foregut,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Anterior subdivision of a digestive tract.,,,,,,,,
http://purl.obolibrary.org/obo/IAO_0000005,objective specification,,A directive information entity that describes an intended process endpoint. When part of a plan specification the concretization is realized in a planned process in which the bearer tries to effect the world so that the process endpoint is achieved.,FALSE,,,,,,,goal specification,,,,,,,,,,,,,,OBI_0000217|OBI Plan and Planned Process/Roles Branch,,,,"Answers the question, why did you do this experiment?|2014-03-31: In the example of usage (""In the protocol of a ChIP assay the objective specification says to identify protein and DNA interaction"") there is a protocol which is the ChIP assay protocol. In addition to being concretized on paper, the protocol can be concretized as a realizable entity, such as a plan that inheres in a person. The objective specification is the part that says that some protein and DNA interactions are identified. This is a specification of a process endpoint: the boundary in the process before which they are not identified and after which they are. During the realization of the plan, the goal is to get to the point of having the interactions, and participants in the realization of the plan try to do that.|2009-03-16: original definition when imported from OBI read: ""objective is an non realizable information entity which can serve as that  proper part of a plan towards which the realization of the plan is directed.""",objective specification,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,IAO:0000005,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/iao.owl|http://purl.obolibrary.org/obo/cob.owl,,,,,,,,,objective specification,,,,,,,,,,,,,,,,,,,,,,,,,,,,PERSON: Jennifer Fostel|PERSON: Bjoern Peters|PERSON: Barry Smith|PERSON: Alan Ruttenberg,,,,A directive information entity that describes an intended process endpoint. When part of a plan specification the concretization is realized in a planned process in which the bearer tries to effect the world so that the process endpoint is achieved.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00002570,pork loin,,"A cut of meat from a pig, that comes from the tissue along the dorsal side of the rib cage.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00002570,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pork loin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A cut of meat from a pig, that comes from the tissue along the dorsal side of the rib cage.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002042,obsolete: antibiotic sensitive (S),,Susceptible indicates that an isolate is observed to offer a detectable but less than intermediate level of resistance to a given antibiotic.,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002042,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: antibiotic sensitive (S),,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,http://purl.obolibrary.org/obo/NCIT_C85563,,,Susceptible indicates that an isolate is observed to offer a detectable but less than intermediate level of resistance to a given antibiotic.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00005396,lamb flap (raw),,A raw lamb flap cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00005396,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lamb flap (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw lamb flap cut.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0000790,Hematuria,High urine occult blood,The presence of blood in the urine. Hematuria may be gross hematuria (visible to the naked eye) or microscopic hematuria (detected by dipstick or microscopic examination of the urine).,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0018965|SNOMEDCT_US:53298000|SNOMEDCT_US:34436003,,,,,,,,,,,,,,,,,,,,,,,,High urine occult blood,Blood in urine,,,,HP:0000790,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Hematuria,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The presence of blood in the urine. Hematuria may be gross hematuria (visible to the naked eye) or microscopic hematuria (detected by dipstick or microscopic examination of the urine).,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102198,liter per day,,A volumetric flow rate unit which is the measure of the volume of one liter of matter crosses a given surface during the period of time equal to one day.,FALSE,,,,,,,L/day,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102198,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2026-04-13T19:52:38.515Z,,,,,,,,,,,,,,,,,,,liter per day,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A volumetric flow rate unit which is the measure of the volume of one liter of matter crosses a given surface during the period of time equal to one day.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0004722,deep cervical lymph node,,"The deep cervical lymph nodes are a group of cervical lymph nodes found near the internal jugular vein. They can be divided into upper and lower groups, or superior and inferior groups. Alternatively, they can be divided into deep anterior cervical lymph nodes and deep lateral cervical lymph nodes. They can also be divided into three groups: superior deep jugular, middle deep jugular, and 'inferior deep jugular'.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Deep_cervical_lymph_nodes|UMLS:C0458298|SCTID:279145002|NCIT:C32431|MA:0002885|EMAPA:37510,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0004722,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,deep cervical lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The deep cervical lymph nodes are a group of cervical lymph nodes found near the internal jugular vein. They can be divided into upper and lower groups, or superior and inferior groups. Alternatively, they can be divided into deep anterior cervical lymph nodes and deep lateral cervical lymph nodes. They can also be divided into three groups: superior deep jugular, middle deep jugular, and 'inferior deep jugular'.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470126,aseptic filling and sealing of food,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0126,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470126,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,aseptic filling and sealing of food,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001706,NCBI BioSample collection code,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI BioSample: collection_code,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001706,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI BioSample collection code,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_2003,European (EUR) reference superpopulation (1KGP),European Ancestry (1KGP)|EUR reference superpopulation (1KGP)|EUR,A reference population made up of samples from individuals with a European Ancestry as part of the 1000 Genomes Project.,FALSE,,,,,,,,,,,,,,This category was created to facilitate the grouping of reference populations into the superpopulations they were allocated to in the context of the project in which they were collected. This classification is intended for project provenance traceability and does not imply any kind of biological difference.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,European Ancestry (1KGP)|EUR reference superpopulation (1KGP)|EUR,,,,HANCESTRO:2003,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,European (EUR) reference superpopulation (1KGP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A reference population made up of samples from individuals with a European Ancestry as part of the 1000 Genomes Project.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_2000,African (AFR) reference superpopulation (1KGP),African Ancestry (1KGP)|AFR reference superpopulation (1KGP)|AFR,A reference population made up of samples from individuals with an African Ancestry as part of the 1000 Genomes Project and Gambian Genome Variation Project (GGVP).,FALSE,,,,,,,,,,,,,,This category was created to facilitate the grouping of reference populations into the superpopulations they were allocated to in the context of the project in which they were collected. This classification is intended for project provenance traceability and does not imply any kind of biological difference.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,African Ancestry (1KGP)|AFR reference superpopulation (1KGP)|AFR,,,,HANCESTRO:2000,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,African (AFR) reference superpopulation (1KGP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A reference population made up of samples from individuals with an African Ancestry as part of the 1000 Genomes Project and Gambian Genome Variation Project (GGVP).,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_2005,African reference superpopulation (HGDP),Africa (HGDP),A reference population made up of samples from individuals with an African Ancestry as part of the Human Genome Diversity Project.,FALSE,,,,,,,,,,,,,,This category was created to facilitate the grouping of reference populations into the superpopulations they were allocated to in the context of the project in which they were collected. This classification is intended for project provenance traceability and does not imply any kind of biological difference.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Africa (HGDP),,,,HANCESTRO:2005,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,African reference superpopulation (HGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A reference population made up of samples from individuals with an African Ancestry as part of the Human Genome Diversity Project.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_2007,Central South Asian reference superpopulation (HGDP),Central South Asia (HGDP),A reference population made up of samples from individuals with a Central South Asian Ancestry as part of the Human Genome Diversity Project.,FALSE,,,,,,,,,,,,,,This category was created to facilitate the grouping of reference populations into the superpopulations they were allocated to in the context of the project in which they were collected. This classification is intended for project provenance traceability and does not imply any kind of biological difference.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Central South Asia (HGDP),,,,HANCESTRO:2007,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Central South Asian reference superpopulation (HGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A reference population made up of samples from individuals with a Central South Asian Ancestry as part of the Human Genome Diversity Project.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_2006,American reference superpopulation (HGDP),America (HGDP),A reference population made up of samples from individuals with an American Ancestry as part of the Human Genome Diversity Project.,FALSE,,,,,,,,,,,,,,This category was created to facilitate the grouping of reference populations into the superpopulations they were allocated to in the context of the project in which they were collected. This classification is intended for project provenance traceability and does not imply any kind of biological difference.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,America (HGDP),,,,HANCESTRO:2006,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,American reference superpopulation (HGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A reference population made up of samples from individuals with an American Ancestry as part of the Human Genome Diversity Project.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_2009,European reference superpopulation (HGDP),Europe (HGDP),A reference population made up of samples from individuals with a European Ancestry as part of the Human Genome Diversity Project.,FALSE,,,,,,,,,,,,,,This category was created to facilitate the grouping of reference populations into the superpopulations they were allocated to in the context of the project in which they were collected. This classification is intended for project provenance traceability and does not imply any kind of biological difference.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Europe (HGDP),,,,HANCESTRO:2009,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,European reference superpopulation (HGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A reference population made up of samples from individuals with a European Ancestry as part of the Human Genome Diversity Project.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_2002,East Asian (EAS) reference superpopulation (1KGP),East Asian Ancestry (1KGP)|EAS reference superpopulation (1KGP)|EAS,A reference population made up of samples from individuals with an East Asian Ancestry as part of the 1000 Genomes Project.,FALSE,,,,,,,,,,,,,,This category was created to facilitate the grouping of reference populations into the superpopulations they were allocated to in the context of the project in which they were collected. This classification is intended for project provenance traceability and does not imply any kind of biological difference.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,East Asian Ancestry (1KGP)|EAS reference superpopulation (1KGP)|EAS,,,,HANCESTRO:2002,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,East Asian (EAS) reference superpopulation (1KGP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A reference population made up of samples from individuals with an East Asian Ancestry as part of the 1000 Genomes Project.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_2001,American (AMR) reference superpopulation (1KGP),AMR reference superpopulation (1KGP),A reference population made up of samples from individuals with an American Ancestry as part of the 1000 Genomes Project.,FALSE,,,,,,,,,,,,,,This category was created to facilitate the grouping of reference populations into the superpopulations they were allocated to in the context of the project in which they were collected. This classification is intended for project provenance traceability and does not imply any kind of biological difference.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AMR reference superpopulation (1KGP),American Ancestry (1KGP)|AMR,,,,HANCESTRO:2001,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,American (AMR) reference superpopulation (1KGP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A reference population made up of samples from individuals with an American Ancestry as part of the 1000 Genomes Project.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_2004,South Asian (SAS) reference superpopulation (1KGP),South Asian Ancestry (1KGP)|SAS reference superpopulation (1KGP)|SAS,A reference population made up of samples from individuals with a South Asian Ancestry as part of the 1000 Genomes Project.,FALSE,,,,,,,,,,,,,,This category was created to facilitate the grouping of reference populations into the superpopulations they were allocated to in the context of the project in which they were collected. This classification is intended for project provenance traceability and does not imply any kind of biological difference.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,South Asian Ancestry (1KGP)|SAS reference superpopulation (1KGP)|SAS,,,,HANCESTRO:2004,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,South Asian (SAS) reference superpopulation (1KGP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A reference population made up of samples from individuals with a South Asian Ancestry as part of the 1000 Genomes Project.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_2008,East Asian reference superpopulation (HGDP),East Asia (HGDP),A reference population made up of samples from individuals with an East Asian Ancestry as part of the Human Genome Diversity Project.,FALSE,,,,,,,,,,,,,,This category was created to facilitate the grouping of reference populations into the superpopulations they were allocated to in the context of the project in which they were collected. This classification is intended for project provenance traceability and does not imply any kind of biological difference.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,East Asia (HGDP),,,,HANCESTRO:2008,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,East Asian reference superpopulation (HGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A reference population made up of samples from individuals with an East Asian Ancestry as part of the Human Genome Diversity Project.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000141,Region (England) (entry subject to GAZ replacement),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000141,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Region (England) (entry subject to GAZ replacement),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0816,Crete in Greece (SGDP),Crete,A population made up of 2 samples from Crete individuals recruited in Greece as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Crete,,,,HANCESTRO:0816,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Crete in Greece (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Crete individuals recruited in Greece as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0813,Bergamo in Italy(Bergamo) (SGDP),Bergamo,A population made up of 2 samples from Bergamo individuals recruited in Italy(Bergamo) as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Bergamo,,,,HANCESTRO:0813,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Bergamo in Italy(Bergamo) (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Bergamo individuals recruited in Italy(Bergamo) as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0818,Druze in Israel(Carmel) (SGDP),Druze,A population made up of 2 samples from Druze individuals recruited in Israel(Carmel) as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Druze,,,,HANCESTRO:0818,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Druze in Israel(Carmel) (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Druze individuals recruited in Israel(Carmel) as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0819,English in England (SGDP),English,A population made up of 2 samples from English individuals recruited in England as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,English,,,,HANCESTRO:0819,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,English in England (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from English individuals recruited in England as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0817,Czech in Czechoslovakia(pre1989) (SGDP),Czech,A population made up of 1 samples from Czech individuals recruited in Czechoslovakia(pre1989) as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Czech,,,,HANCESTRO:0817,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Czech in Czechoslovakia(pre1989) (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 1 samples from Czech individuals recruited in Czechoslovakia(pre1989) as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0811,Basque in France (SGDP),Basque,A population made up of 2 samples from Basque individuals recruited in France as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Basque,,,,HANCESTRO:0811,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Basque in France (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Basque individuals recruited in France as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0815,Chechen in Russia (SGDP),Chechen,A population made up of 1 samples from Chechen individuals recruited in Russia as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Chechen,,,,HANCESTRO:0815,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Chechen in Russia (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 1 samples from Chechen individuals recruited in Russia as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0814,Bulgarian in Bulgaria (SGDP),Bulgarian,A population made up of 2 samples from Bulgarian individuals recruited in Bulgaria as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Bulgarian,,,,HANCESTRO:0814,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Bulgarian in Bulgaria (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Bulgarian individuals recruited in Bulgaria as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0812,Bedouin B in Israel(Negev) (SGDP),Bedouin B,A population made up of 2 samples from Bedouin B individuals recruited in Israel(Negev) as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Bedouin B,,,,HANCESTRO:0812,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Bedouin B in Israel(Negev) (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Bedouin B individuals recruited in Israel(Negev) as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0810,Armenian in Armenia (SGDP),Armenian,A population made up of 2 samples from Armenian individuals recruited in Armenia as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Armenian,,,,HANCESTRO:0810,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Armenian in Armenia (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Armenian individuals recruited in Armenia as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,,,,,,,,
http://purl.obolibrary.org/obo/CLO_0000001,cell line cell,,"A cultured cell that is part of a cell line - a stable and homogeneous population of cells with a common biological origin and propagation history in culture
|A cultured cell that is part of a cell line - a stable and homogeneous population of cells with a common biological origin and propagation history in culture",FALSE,,,,,,,,,,,,,,"A 'cell line cell' is a part of a cell line established through the passaging/selection of a primary cultured cells or the experimental modification of an existing cell line. New types of cell line cells are established after sufficient passaging of a primary culture to establish a stable and homogenous population that qualifies as a line (typically 1-20 passages), or following some spontaneous or experimental modification that confers novel characteristics to an existing line. A cell line cell typically has mutations of five or more genes compared to the original cell that derives the cell line cell. Some gene mutations may turn on some oncogenes.  Cell line cells can be in active culture, stored in a quiescent state for future use (e.g. frozen in liquid nitrogen), or applied in experimental procedures.  ",,,,,,,,,,,,cell line cell,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CLO:0000001,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/clo.owl,,,,,,,,,cell line cell,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Yongqun He, Matthew Brush, Sirarat Sarntivijai, Alexander Diehl, Jie Zheng, Yu Lin, Bjoern Peters",,,,"A cultured cell that is part of a cell line - a stable and homogeneous population of cells with a common biological origin and propagation history in culture
|A cultured cell that is part of a cell line - a stable and homogeneous population of cells with a common biological origin and propagation history in culture",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001632,contig length,,A contig length is the count of base pairs in a given sequence assembly contig.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001632,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/SO_0000149,,,,,,contig length,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A contig length is the count of base pairs in a given sequence assembly contig.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_10887,lepromatous leprosy,,"A leprosy that results in early cutaneous lesions which consist of pale macules that are small, diffuse, and symmetric. This form of leprosy is characterized by hypoesthesia over extensor surfaces of the distal extremities, alopecia affecting lateral aspects of the eyebrows, saddle-nose deformity and oral lepromas.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:10887,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,lepromatous leprosy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A leprosy that results in early cutaneous lesions which consist of pale macules that are small, diffuse, and symmetric. This form of leprosy is characterized by hypoesthesia over extensor surfaces of the distal extremities, alopecia affecting lateral aspects of the eyebrows, saddle-nose deformity and oral lepromas.",,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000210,channel1/channel2 fluorescence intensity ratio,,"is a data item formed by dividing the fluorescence intensity obtained in one channel to that obtained in the other channel, typically the case when considering 2-color microarray data when imaging is done for Cy3 and Cy5 dyes.",FALSE,,,,,,,,,,,,,,,,,,,,,STATO,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000210,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,channel1/channel2 fluorescence intensity ratio,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra|Alejandra Gonzalez-Beltran|Orlaith Burke,,,,"is a data item formed by dividing the fluorescence intensity obtained in one channel to that obtained in the other channel, typically the case when considering 2-color microarray data when imaging is done for Cy3 and Cy5 dyes.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102148,MGI DNBSEQ-G40 FluroXpert,,"An MGI DNBSEQ instrument model which utilises DNA nanoball sequencing with multiplex immunofluorescence staining capabilities, enabling simultaneous genomic and proteomic analyses.",FALSE,,,,,,,DNBSEQ-G40 FluroXpert,,,,,,,,,,,,,,https://www.completegenomics.com/products/sequencing-platforms/dnbseq-g400-fluoxpert/| https://en.mgi-tech.com/products/instruments_info/2/,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102148,,,,,,,,,,,,,https://orcid.org/0000-0002-7654-6902|https://orcid.org/0000-0001-8008-8249,2025-03-21T01:14:47.111Z,,,,,,,,,,,,,,,,,,,MGI DNBSEQ-G40 FluroXpert,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An MGI DNBSEQ instrument model which utilises DNA nanoball sequencing with multiplex immunofluorescence staining capabilities, enabling simultaneous genomic and proteomic analyses.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100255,administrator role,,A role inhering in a person that is realized when the bearer is engaged in administration or administrative work.,FALSE,,,,,,,Administrator,,,,,,,,,,,,,,https://en.wiktionary.org/wiki/worker,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100255,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,administrator role,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A role inhering in a person that is realized when the bearer is engaged in administration or administrative work.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0004297,Abnormality of the biliary system,,An abnormality of the biliary system.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0940767,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0004297,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormality of the biliary system,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An abnormality of the biliary system.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03460288,curing or aging < 2 weeks,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=H0288,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03460288,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,curing or aging < 2 weeks,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/COB_0000110,material processing,,A completely executed planned process that intends to output material entities from input material entities,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,COB:0000110,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/cob.owl,,,,,,,,,material processing,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A completely executed planned process that intends to output material entities from input material entities,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C19148,In Vivo Model,In Vivo Model,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,In Vivo Model,,,,NCIT:C19148,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,In Vivo Model,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C191480,Death due to Acute Myocardial Infarction Related to COVID-19,Death due to acute MI|Death due to Acute Myocardial Infarction Related to COVID-19,"Death by any cardiovascular mechanism (e.g., arrhythmia, sudden death, heart failure (HF), stroke, pulmonary embolus, peripheral arterial disease) less than or equal to 30 days after a myocardial infarction (MI), related to the immediate consequences of the MI, such as progressive HF or recalcitrant arrhythmia in a patient with probable or confirmed acute COVID-19.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Death due to acute MI|Death due to Acute Myocardial Infarction Related to COVID-19,,,,NCIT:C191480,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Death due to Acute Myocardial Infarction Related to COVID-19,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Death by any cardiovascular mechanism (e.g., arrhythmia, sudden death, heart failure (HF), stroke, pulmonary embolus, peripheral arterial disease) less than or equal to 30 days after a myocardial infarction (MI), related to the immediate consequences of the MI, such as progressive HF or recalcitrant arrhythmia in a patient with probable or confirmed acute COVID-19.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03450029,deep-frying process,,Cooked in hot fat or oil deep enough to immerse the food entirely.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=G0029,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03450029,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,deep-frying process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Cooked in hot fat or oil deep enough to immerse the food entirely.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0040085,bacterial sepsis,,A bacterial infectious disease has_material_basis_in Bacteria.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0040085,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,bacterial sepsis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A bacterial infectious disease has_material_basis_in Bacteria.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0040083,Chlamydia pneumonia,,A bacterial pneumonia has_material_basis_in Chlamydia pneumoniae.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0040083,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,Chlamydia pneumonia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A bacterial pneumonia has_material_basis_in Chlamydia pneumoniae.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0040084,Streptococcus pneumonia,,A bacterial pneumonia has_material_basis_in Streptococcus pneumoniae.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0040084,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,Streptococcus pneumonia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A bacterial pneumonia has_material_basis_in Streptococcus pneumoniae.,,,,,,,,
http://purl.obolibrary.org/obo/OMIT_0014958,"Toxins, Biological",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OMIT:0014958,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/omit.owl,,,,,,,,,"Toxins, Biological",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100000,RmYN02,,"A severe acute respiratory syndrome-related coronavirus which is 1) bat-derived, 2) sharing 93.3% nucleotide identity with SARS-CoV-2, and 3) contains an insertion at the S1/S2 cleavage site in the spike protein.",FALSE,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/RmYN02,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100000,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,RmYN02,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A severe acute respiratory syndrome-related coronavirus which is 1) bat-derived, 2) sharing 93.3% nucleotide identity with SARS-CoV-2, and 3) contains an insertion at the S1/S2 cleavage site in the spike protein.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002075,Genomic Standards Consortium (GSC) standard,,"A Genomic Standards Consortium standard is an international, community-driven standard to facilitate  genomic data integration, discovery and comparison.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002075,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Genomic Standards Consortium (GSC) standard,,,,,,,,,,,,,,,,,,,,,,http://gensc.org/,,,,,,Damion Dooley,,,,"A Genomic Standards Consortium standard is an international, community-driven standard to facilitate  genomic data integration, discovery and comparison.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490228,"one component adhesive, water soluble",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0228,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490228,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"one component adhesive, water soluble",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020466,"piece of turkey meat (skinless, raw)",,A raw piece of skinless turkey meat.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020466,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"piece of turkey meat (skinless, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw piece of skinless turkey meat.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100436,sampling location name site,geographical location site name|geo_loc name (site),A data field which describes the name of a specific geographical location (i.e. toponym).,FALSE,,,,,,,PCDS:geo_loc_name_site,,,,,,,"PCDS: Provide the name of the specific geographical site using a specific noun (a word that names a certain place, thing).",,,,,,,,,,,,,,PCDS: Lake Louise,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,geographical location site name|geo_loc name (site),sample collection name site,,,,GENEPIO:0100436,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,sampling location name site,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the name of a specific geographical location (i.e. toponym).,,PCDS: The name of a specific geographical location.,,,,,,
http://purl.obolibrary.org/obo/UBERON_0035204,occipital lymph node,occipital node,A lymph node located in the back of the head adjacent to the trapezius muscle.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Occipital_lymph_nodes|UMLS:C0229711|SCTID:245326003|NCIT:C98188|FMA:61214,,,,,,,,,,,,,,,,,,,,,,,,,occipital node,,,,UBERON:0035204,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,occipital lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A lymph node located in the back of the head adjacent to the trapezius muscle.,,,,,,,,
http://semanticscience.org/resource/SIO_000503,polygonal face,,A polygon serves as a boundary for an area of interest that exists within a larger area.,FALSE,,,,,,,,,,,,,,A polygon serves as a boundary for an area of interest that exists within a larger area.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,resource:SIO_000503,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,polygonal face,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_17,musculoskeletal system disease,,A disease of anatomical entity that occurs in the muscular and/or skeletal system.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:17,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,musculoskeletal system disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A disease of anatomical entity that occurs in the muscular and/or skeletal system.,,,,,,,,
http://purl.obolibrary.org/obo/PCO_0000034,human community event,,A human social event in which humans living in the same area or neighborhood gather to carry out activiites relevent to the people living in the area.,FALSE,,,,,,,,,,,,,,,,,,,,,GenEpio curators,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PCO:0000034,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/pco.owl,,,,,,,,,human community event,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A human social event in which humans living in the same area or neighborhood gather to carry out activiites relevent to the people living in the area.,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0005027,epilepsy,seizure disorder|epilepsy,"A brain disorder characterized by episodes of abnormally increased neuronal discharge resulting in transient episodes of sensory or motor neurological dysfunction, or psychic dysfunction. These episodes may or may not be associated with loss of consciousness or convulsions.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,birnlex:12718|UMLS:C0014544|SCTID:84757009|NCIT:C3020|MESH:D004827|MEDGEN:4506|ICD9:345.91|ICD9:345.90|ICD9:345.9|ICD9:345.80|ICD9:345.8|ICD9:345|ICD10WHO:G40|ICD10CM:G40|EFO:0000474|DOID:1826,,,,,,,,,,,,,,,,,,,,,,,,,seizure disorder|epilepsy,,,,MONDO:0005027,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar|http://purl.oboInOwllibrary.org/oboInOwl/mondo#clingen,,,,,,,,epilepsy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A brain disorder characterized by episodes of abnormally increased neuronal discharge resulting in transient episodes of sensory or motor neurological dysfunction, or psychic dysfunction. These episodes may or may not be associated with loss of consciousness or convulsions.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000132,beef strip petite roast (raw),,A raw beef strip petite roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000132,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef strip petite roast (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef strip petite roast.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02021035,buffalo roast (raw),,A raw buffalo roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02021035,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,buffalo roast (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw buffalo roast.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000270,volumetric flow rate unit,,A unit which is a standard measure of the volume of fluid which passes through a given surface per unit time .,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:0000270,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,volumetric flow rate unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A unit which is a standard measure of the volume of fluid which passes through a given surface per unit time .,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000273,milligram per liter,milligram per litre|mg/L,A mass unit density which is equal to mass of an object in milligrams divided by the volume in liters.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,milligram per litre|mg/L,,,,UO:0000273,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,milligram per liter,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A mass unit density which is equal to mass of an object in milligrams divided by the volume in liters.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000275,nanogram per milliliter,ng/ml|nanogram per millilitre,A mass unit density which is equal to mass of an object in nanograms divided by the volume in milliliters.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ng/ml|nanogram per millilitre,,,,UO:0000275,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,nanogram per milliliter,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A mass unit density which is equal to mass of an object in nanograms divided by the volume in milliliters.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000274,microgram per milliliter,ug/ml|microgram per millilitre,A mass unit density which is equal to mass of an object in micrograms divided by the volume in millliters.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,µg/ml,,ug/ml|microgram per millilitre,,,,UO:0000274,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,microgram per milliliter,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A mass unit density which is equal to mass of an object in micrograms divided by the volume in millliters.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0855,Mixe,,"Individuals who self-identify or are reported by authors as belonging to the Mixe indigenous people of Mexcio who live in the eastern highlands of the state of Oaxaca and speak the Mixe languages, part of the Mixe-Zoque family.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0855,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Mixe,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Individuals who self-identify or are reported by authors as belonging to the Mixe indigenous people of Mexcio who live in the eastern highlands of the state of Oaxaca and speak the Mixe languages, part of the Mixe-Zoque family.",,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0856,Surui,Suruí do Jiparaná|Suruí de Rondônia|Suruí|Paiter,"Individuals who self-identify or are reported by authors as belonging to an indigenous people of Brazil, who live in ten villages near the Mato Grosso–Rondônia border. This population is not be confused with the Suruí do Pará people of Brazil.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Suruí do Jiparaná|Suruí de Rondônia|Suruí|Paiter,,,,HANCESTRO:0856,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Surui,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Individuals who self-identify or are reported by authors as belonging to an indigenous people of Brazil, who live in ten villages near the Mato Grosso–Rondônia border. This population is not be confused with the Suruí do Pará people of Brazil.",,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0857,Persian,,"Individuals who self-identify or are reported by authors as belonging to the Persion ethnolinguistic group of Western Iran, which comprises the majority of the population of Iran",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0857,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Persian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Individuals who self-identify or are reported by authors as belonging to the Persion ethnolinguistic group of Western Iran, which comprises the majority of the population of Iran",,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0854,Karitiana,Caritiana,"Individuals who self-identify or are reported by authors as belonging to the Karitiana, an indigenous people of Brazil whose reservation is located in the western Amazon and whose language is part of the Arikém family.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Caritiana,,,,HANCESTRO:0854,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Karitiana,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Individuals who self-identify or are reported by authors as belonging to the Karitiana, an indigenous people of Brazil whose reservation is located in the western Amazon and whose language is part of the Arikém family.",,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0853,Chane,Izoceño|Izoceno|Chané,"Individuals who self-identify or are reported by authors as belonging to an Arawakan ethnolinguistic group who originally lived in the plains of the northern Gran Chaco and in the foothills of the Andes in Paraguay, Brazil, Bolivia, and Argentina.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Izoceño|Izoceno|Chané,,,,HANCESTRO:0853,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Chane,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Individuals who self-identify or are reported by authors as belonging to an Arawakan ethnolinguistic group who originally lived in the plains of the northern Gran Chaco and in the foothills of the Andes in Paraguay, Brazil, Bolivia, and Argentina.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C32221,Body Part,Body Structure|Body Part,Any part of an organism.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Body Structure|Body Part,,,,NCIT:C32221,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Body Part,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any part of an organism.,,,,,,,,
http://purl.obolibrary.org/obo/OMIT_0001004,Chemicals and Drugs Category,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OMIT:0001004,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/omit.owl,,,,,,,,,Chemicals and Drugs Category,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000622,ratio-based measure of association,,ratio-based measure of association is a measure of association which relies on a quotient of 2 quantities to indicate the strength of the association.,FALSE,,,,,,,,,,,,,,,,,,,,,COKA group,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000622,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,ratio-based measure of association,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ratio-based measure of association is a measure of association which relies on a quotient of 2 quantities to indicate the strength of the association.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000120,travel history item,,A datetime measurement related to a person's travel with respect to potential epidemilogical implications.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,travel history item,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A datetime measurement related to a person's travel with respect to potential epidemilogical implications.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03311076,pork chop (raw),,A raw pork chop.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://bioregistry.io/reference/siren:F11076,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03311076,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pork chop (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw pork chop.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000059,Stx2 cell culture level,,A measurement datum which describes the level of Stx2 toxin derived tissue culture toxicity.,FALSE,,,,,,,,,,,,,,,,,,,,,GROUP: IRIDA Ontology (Emma),,,,,,,value?,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000059,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,http://purl.obolibrary.org/obo/OMIT_0020918,,,,,,Stx2 cell culture level,,,,,Lab Analytic,,,,,,,,,,,,,,,,,,,,,,Stx2 Cell Culture,,,NML Labware LIMS,,A measurement datum which describes the level of Stx2 toxin derived tissue culture toxicity.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_25750,oxime,,Compounds of structure R<small><sub>2</sub></small>C=NOH derived from condensation of aldehydes or ketones with hydroxylamine. Oximes from aldehydes may be called aldoximes; those from ketones may be called ketoximes.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:25750,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,oxime,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Compounds of structure R<small><sub>2</sub></small>C=NOH derived from condensation of aldehydes or ketones with hydroxylamine. Oximes from aldehydes may be called aldoximes; those from ketones may be called ketoximes.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001811,State (United States of America),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001811,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,State (United States of America),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100266,acquaintance role,,A role inhering in a person that is realized when the bearer is in a state of being acquainted with a person.,FALSE,,,,,,,Acquaintance of case,,,,,,,,,,,,,,https://en.wiktionary.org/wiki/acquaintance,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100266,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,acquaintance role,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A role inhering in a person that is realized when the bearer is in a state of being acquainted with a person.,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0004781,acute myocardial infarction,"myocardial infarction (disease), acute|acute myocardial infarction (disease)","Necrosis of the myocardium, as a result of interruption of the blood supply to the area. It is characterized by a severe and rapid onset of symptoms that may include chest pain, often radiating to the left arm and left side of the neck, dyspnea, sweating, and palpitations.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,icd11.foundation:1334938734|UMLS:C0155626|SCTID:57054005|NCIT:C35204|MEDGEN:57611|ICD9:410.92|ICD9:410.91|ICD9:410.90|ICD9:410.9|ICD9:410.82|ICD9:410.81|ICD9:410.80|ICD9:410|ICD10WHO:I21|ICD10CM:I21.9|EFO:0008583|DOID:9408,,,,,,,,,,,,,,,,,,,,,,,,,"myocardial infarction (disease), acute|acute myocardial infarction (disease)",,,,MONDO:0004781,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,acute myocardial infarction,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Necrosis of the myocardium, as a result of interruption of the blood supply to the area. It is characterized by a severe and rapid onset of symptoms that may include chest pain, often radiating to the left arm and left side of the neck, dyspnea, sweating, and palpitations.",,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0100329,primary viral infectious disease,,The initial viral infectious disase that causes illness.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MONDO:0100329,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,,,,,,,,,primary viral infectious disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The initial viral infectious disase that causes illness.,,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000672,event rate,,The number of occurrences per unit of time.,FALSE,,,,,,,,,,,,,,,,,,,,,SEVCO group,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000672,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,event rate,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Brian S. Alper, Joanne Dehnbostel, Muhammad Afzal, Kenneth Wilkins, Harold Lehmann.",,,,The number of occurrences per unit of time.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001869,linear coordinate,,A coordinate composed of a given dimension and the offset from the origin of the dimension to some point,FALSE,,,,,,,,,,,,,,A coordinate composed of a given dimension and the offset from the origin of the dimension to some point,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/UO_0000001,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001869,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,linear coordinate,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley|http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000018,gravel,,An environmental material which is composed primarily of pieces of gravel.,FALSE,,,,,,,,,,,,,,"As with all size-based classifications, there is considerable variation in what is considered gravel.",,,,,,,,,,,,,,,,,,SWEETRealm:Gravel|EcoLexicon:gravel,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01000018,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,gravel,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental material which is composed primarily of pieces of gravel.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_46812,"1,3-oxazoles",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:46812,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,"1,3-oxazoles",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001708,food - solid,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001708,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,food - solid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_22479,amino cyclitol glycoside,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:22479,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,amino cyclitol glycoside,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001687,Salmonella serovar specification,,Damion's note: This will be converted to a categorical tree specification list of serovars by name or id asap.,FALSE,,,,,,,,,,,,,,Damion's note: This will be converted to a categorical tree specification list of serovars by name or id asap.,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001687,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Salmonella serovar specification,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001726,obsolete: swab - inanimate object surface,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000229,,,,,,,,,,,,,,,,,,,GENEPIO:0001726,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: swab - inanimate object surface,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_72292,bedaquiline,,"A quinoline-based antimycobacterial drug used (as its fumarate salt) for the treatment of pulmonary multi-drug resistant tuberculosis by inhibition of ATP synthase, an enzyme essential for the replication of the mycobacteria.",FALSE,,,,,,,Bdq,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:72292,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,bedaquiline,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A quinoline-based antimycobacterial drug used (as its fumarate salt) for the treatment of pulmonary multi-drug resistant tuberculosis by inhibition of ATP synthase, an enzyme essential for the replication of the mycobacteria.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000180,beef short plate (raw),,A raw beef short plate cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000180,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef short plate (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef short plate cut.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03430122,divided or disintegrated,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=E0122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03430122,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,divided or disintegrated,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000083,beef top blade,,"The second most tender muscle in the animal that is derived from the shoulder clod.  However, internal connective tissue should be removed to preserve that tenderness.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000083,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef top blade,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The second most tender muscle in the animal that is derived from the shoulder clod.  However, internal connective tissue should be removed to preserve that tenderness.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_50994,primary amino compound,,A compound formally derived from ammonia by replacing one hydrogen atom by an organyl group.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:50994,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,primary amino compound,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A compound formally derived from ammonia by replacing one hydrogen atom by an organyl group.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020015,animal breast (skinless),,A skinless animal breast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020015,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,animal breast (skinless),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A skinless animal breast.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470176,controlled atmosphere storage process,,"Storage of fruits and vegetables in an atmosphere in which the concentrations of oxygen, carbon dioxide (and often nitrogen) are different from those in air and at a low temperature. All three (four) factors are controlled at the desired levels in order to suppress the fruits' and vegetables' natural respiration.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0176,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470176,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,controlled atmosphere storage process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Storage of fruits and vegetables in an atmosphere in which the concentrations of oxygen, carbon dioxide (and often nitrogen) are different from those in air and at a low temperature. All three (four) factors are controlled at the desired levels in order to suppress the fruits' and vegetables' natural respiration.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_31577,ethylenediamine derivative,,Any organic amino compound that is a derivative of  ethylenediamine.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:31577,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,ethylenediamine derivative,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any organic amino compound that is a derivative of  ethylenediamine.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001448,library id,library_ID|library identifier|library ID,A data field which describes user-specified identifier for the library prepared for sequencing.,FALSE,,,,,,,PCDS:library_id,,,,,,,"PCDS: The library name should be unique, and can be an autogenerated ID from your LIMS, or modification of the isolate ID.",,,,,,,,,,,,,,PCDS: XYZ_123345,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,library_ID|library identifier|library ID,library identifier slot|library identifier field|library ID slot,,,,GENEPIO:0001448,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,library id,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes user-specified identifier for the library prepared for sequencing.,,PCDS: The user-specified identifier for the library prepared for sequencing.,,,,,,
http://purl.obolibrary.org/obo/CHEBI_47017,tetrahydrofuranol,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:47017,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,tetrahydrofuranol,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_51750,"alpha,beta-unsaturated carboxylic acid amide",,"A monocarboxylic amide of general formula R<small><sup>1</small></sup>R<small><sup>2</small></sup>C=CR<small><sup>3</small></sup>‒C(=O)NR<small><sup>4</small></sup>R<small><sup>5</small></sup>  or R<small><sup>1</small></sup>C≡C‒C(=O)NR<small><sup>2</small></sup>R<small><sup>3</small></sup> in which the amide C=O function is conjugated to an unsaturated C-C bond at the α,β position.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:51750,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,"alpha,beta-unsaturated carboxylic acid amide",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A monocarboxylic amide of general formula R<small><sup>1</small></sup>R<small><sup>2</small></sup>C=CR<small><sup>3</small></sup>‒C(=O)NR<small><sup>4</small></sup>R<small><sup>5</small></sup>  or R<small><sup>1</small></sup>C≡C‒C(=O)NR<small><sup>2</small></sup>R<small><sup>3</small></sup> in which the amide C=O function is conjugated to an unsaturated C-C bond at the α,β position.",,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00000847,Azores,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00000847,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Azores,http://purl.obolibrary.org/obo/GAZ_00001141,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0050486,exanthem,,"A skin disease that is characterized by a rash that results from a variety of causes including bacteria, viruses, toxins, drugs and autoimmune disorders.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0050486,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,exanthem,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A skin disease that is characterized by a rash that results from a variety of causes including bacteria, viruses, toxins, drugs and autoimmune disorders.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_0050485,sennetsu fever,,"A primary bacterial infectious disease that results_in infection, has_material_basis_in Neorickettsia sennetsu, which is transmitted_by ingestion of raw or under-cooked gray mullet fish infected with the trematodes. The infection has_symptom fever, has_symptom malaise, has_symptom anorexia, has_symptom lymphadenopathy, has_symptom hepatosplenomegaly, has_symptom fatigue, has_symptom chills, has_symptom headache, has_symptom backache and has_symptom myalgia.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0050485,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,sennetsu fever,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A primary bacterial infectious disease that results_in infection, has_material_basis_in Neorickettsia sennetsu, which is transmitted_by ingestion of raw or under-cooked gray mullet fish infected with the trematodes. The infection has_symptom fever, has_symptom malaise, has_symptom anorexia, has_symptom lymphadenopathy, has_symptom hepatosplenomegaly, has_symptom fatigue, has_symptom chills, has_symptom headache, has_symptom backache and has_symptom myalgia.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_0050480,epidemic typhus,,"A typhus that has_material_basis_in Rickettsia prowazekii, which is transmitted by human body louse (Pediculus humanus corporis). The infection has_symptom high fever, has_symptom cough, has_symptom rash, has_symptom severe muscle pain, has_symptom chills, has_symptom falling blood pressure, has_symptom stupor, has_symptom sensitivity to light, and has_symptom delirium.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0050480,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,epidemic typhus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A typhus that has_material_basis_in Rickettsia prowazekii, which is transmitted by human body louse (Pediculus humanus corporis). The infection has_symptom high fever, has_symptom cough, has_symptom rash, has_symptom severe muscle pain, has_symptom chills, has_symptom falling blood pressure, has_symptom stupor, has_symptom sensitivity to light, and has_symptom delirium.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_0050484,aneruptive fever,,"A spotted fever that has_material_basis_in Rickettsia helvetica, which is transmitted_by ticks (Ixodes sp). The infection has_symptom fever, has_symptom headache, has_symptom myalgia.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0050484,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,aneruptive fever,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A spotted fever that has_material_basis_in Rickettsia helvetica, which is transmitted_by ticks (Ixodes sp). The infection has_symptom fever, has_symptom headache, has_symptom myalgia.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_0050487,bacterial exanthem,,"An exanthem that is characterized by a diffuse, reddened, blanchable, finely papular, sandpaper like rash due to infection by group A streptococcus and the production of an erythrogenic toxin.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0050487,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,bacterial exanthem,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An exanthem that is characterized by a diffuse, reddened, blanchable, finely papular, sandpaper like rash due to infection by group A streptococcus and the production of an erythrogenic toxin.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_0050481,endemic typhus,,"A typhus that has_material_basis_in Rickettsia typhi or has_material_basis_in Rickettsia felis, which are transmitted by fleas (Xenopsylla cheopis). The infection has symptom headache, has symptom fever, has symptom chills, has symptom myalgia, has symptom nausea, has symptom vomiting, has symptom cough and has symptom rash.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0050481,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,endemic typhus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A typhus that has_material_basis_in Rickettsia typhi or has_material_basis_in Rickettsia felis, which are transmitted by fleas (Xenopsylla cheopis). The infection has symptom headache, has symptom fever, has symptom chills, has symptom myalgia, has symptom nausea, has symptom vomiting, has symptom cough and has symptom rash.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_0050488,early congenital syphilis,,"A congenital syphilis that is manifested during the first 3 months of life. The infection has_symptom skin lesions, has_symptom lymphadenopathy, has_symptom hepatosplenomegaly, has_symptom failure to thrive, has_symptom blood-stained nasal discharge, has_symptom perioral fissures, has_symptom meningitis, has_symptom choroiditis, has_symptom hydrocephalus, has_symptom seizures, has_symptom intellectual disability, has_symptom osteochondritis, and has_symptom pseudoparalysis.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0050488,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,early congenital syphilis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A congenital syphilis that is manifested during the first 3 months of life. The infection has_symptom skin lesions, has_symptom lymphadenopathy, has_symptom hepatosplenomegaly, has_symptom failure to thrive, has_symptom blood-stained nasal discharge, has_symptom perioral fissures, has_symptom meningitis, has_symptom choroiditis, has_symptom hydrocephalus, has_symptom seizures, has_symptom intellectual disability, has_symptom osteochondritis, and has_symptom pseudoparalysis.",,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000095,Anuak,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000095,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Anuak,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000091,Terik,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000091,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Terik,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000098,Nandi,,"A Kalenjin population with a population size of 937,884",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000098,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Nandi,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A Kalenjin population with a population size of 937,884",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0035080,intraparotid lymph node,intraparotid node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SCTID:27053001,,,,,,,,,,,,,,,,,,,,,,,,,intraparotid node,,,,UBERON:0035080,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,intraparotid lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03430153,"whole, shape achieved by forming, thickness <0.3 cm.",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=E0153,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03430153,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"whole, shape achieved by forming, thickness <0.3 cm.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00005378,beef oyster blade,,"A beef cut that is derived from the infraspinatus muscle, which sits on the scapula (shoulder blade) within the chuck primal.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00005378,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef oyster blade,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A beef cut that is derived from the infraspinatus muscle, which sits on the scapula (shoulder blade) within the chuck primal.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03450011,cooking by microwave,,Cooking in a microwave oven.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=G0011,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03450011,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,cooking by microwave,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Cooking in a microwave oven.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102206,most probable number per 100 milliliter,,A unit of microbial density that describes the most probable number of microbes within 100 milliliters of material.,FALSE,,,,,,,MPN/100 mL,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102206,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2026-04-13T19:52:38.515Z,,,,,,,,,,,,,,,,,,,most probable number per 100 milliliter,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A unit of microbial density that describes the most probable number of microbes within 100 milliliters of material.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100467,serovar,serovar,A data field which describes the serovar of the organism.,FALSE,,,,,,,PCDS:serovar,,,,,,,PCDS: Only include this information if it has been determined by traditional serological methods or a validated in silico prediction tool.,,,,,,,,,,,,,,PCDS: Heidelberg,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,serovar,serovar slot|serotype slot|serotype field,,,,GENEPIO:0100467,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,serovar,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the serovar of the organism.,,PCDS: The serovar of the organism.,,,,,,
http://purl.obolibrary.org/obo/FOODON_03500015,food-grade wax surface,,"Wax may be applied directly as a coating to the food product or may be used as a container material. Examples include wax-coated cheese, wax-coated cucumber, waxed fiberboard container, etc.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=N0015,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03500015,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food-grade wax surface,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Wax may be applied directly as a coating to the food product or may be used as a container material. Examples include wax-coated cheese, wax-coated cucumber, waxed fiberboard container, etc.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03430100,"divided into pieces, thickness <0.3 cm.",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=E0100,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03430100,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"divided into pieces, thickness <0.3 cm.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002097,specimen collection location - state/province/territory/region,,An ontology identifier or textual name of the most precise geographical location available for the site of a specimen collection event.,FALSE,,,,,,,,,,,,,,,,,,,,,Adapted from NIAID GSCID-BRC metadata working group,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002097,,,,Note that this is expressed in a particular format in some standards.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,specimen collection location - state/province/territory/region,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,An ontology identifier or textual name of the most precise geographical location available for the site of a specimen collection event.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00005210,Province (New Caledonia),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00005210,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Province (New Caledonia),http://purl.obolibrary.org/obo/GAZ_00005206,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020497,turkey breast (with skin),,A turkey breast that contains skin.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020497,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,turkey breast (with skin),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A turkey breast that contains skin.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100094,organ failure,,An organ dysfunction to such a degree that normal homeostasis cannot be maintained without external clinical intervention.,FALSE,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Organ_dysfunction,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100094,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,organ failure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An organ dysfunction to such a degree that normal homeostasis cannot be maintained without external clinical intervention.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000478,range of mounts,,A field which includes at least two mounts connected by high ground and arranged in an approximately linear fashion.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FTT:996,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00000478,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,envoPolar,,,,,,,,range of mounts,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A field which includes at least two mounts connected by high ground and arranged in an approximately linear fashion.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000154,beef top sirloin petite roast (raw),,A raw beef top sirloin petite roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000154,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef top sirloin petite roast (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef top sirloin petite roast.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002110,MIC diffusion measurement datum,,A MIC test measurement resulting from a laboratory diffusion method.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Damion Dooley's note: is this still useful? Currently ""MIC diffusion measurement specification' refers directly via 'is about' to ""Disk Diffusion Method"".",,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002110,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/NCIT_C128985,,,,,,MIC diffusion measurement datum,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A MIC test measurement resulting from a laboratory diffusion method.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490342,"paperboard container, surface treated both sides",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0342,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490342,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"paperboard container, surface treated both sides",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100227,hotel exposure process,,A process occuring within or in the vicinity of a hotel exposure that exposes the recipient organism to a material entity.,FALSE,,,,,,,Hotel,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100227,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,hotel exposure process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A process occuring within or in the vicinity of a hotel exposure that exposes the recipient organism to a material entity.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_9978,acute female pelvic peritonitis,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:9978,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,acute female pelvic peritonitis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0019050,inherited hemoglobinopathy,hereditary hemoglobinopathy|Hemoglobinopathies / iron metabolism,An inherited disorder characterized by structural alterations of a globin chain within the hemoglobin molecule.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SCTID:427306008|Orphanet:68364|NCIT:C3092|MedDRA:10060892|MESH:D006453|ICD9:282.7|GARD:0018883|DOID:2860,,,,,,,,,,,,,,,,,,,,,,,,,hereditary hemoglobinopathy|Hemoglobinopathies / iron metabolism,,,,MONDO:0019050,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#rare|http://purl.oboInOwllibrary.org/oboInOwl/mondo#ordo_group_of_disorders|http://purl.oboInOwllibrary.org/oboInOwl/mondo#gard_rare|http://purl.oboInOwllibrary.org/oboInOwl/mondo#doid_rare|http://purl.oboInOwllibrary.org/oboInOwl/mondo#disease_grouping,,,,,,,,inherited hemoglobinopathy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An inherited disorder characterized by structural alterations of a globin chain within the hemoglobin molecule.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00009509,Province (Laos),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00009509,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Province (Laos),http://purl.obolibrary.org/obo/GAZ_00006889,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00005415,veal shank (raw),,A raw veal shank cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00005415,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,veal shank (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw veal shank cut.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001713,Blnl,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001713,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Blnl,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001914,hundreds,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001914,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0001913,,,,,,,,,,,hundreds,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0000047,obsolete: processed material,,Is a material entity that is created or changed during material processing.,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,obsolete processed material,,"Examples include gel matrices, filter paper, parafilm and buffer solutions, mass spectrometer, tissue samples",,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000228,,,,,,,,,,,,,,,,,,,OBI:0000047,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: processed material|obsolete processed material,,,,,,,,,,,,,,,,,,,,,,,,,,,,PERSON: Alan Ruttenberg,http://purl.obolibrary.org/obo/COB_0000026,,,Is a material entity that is created or changed during material processing.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100288,host health status details at time of specimen collection,,An organism datum which contains additional contextual details regarding the health or disease status of a host at the time of sample collection.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100288,,,,,,,,,,,,,,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,host health status details at time of specimen collection,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An organism datum which contains additional contextual details regarding the health or disease status of a host at the time of sample collection.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000245,cropland biome,,A cropland ecosystem which is undergoing climactic ecological succession.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01000245,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,cropland biome,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A cropland ecosystem which is undergoing climactic ecological succession.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102188,Viral amplicon sequencing,,"An amplicon sequencing assay in which one or more genomic regions of viral nucleic acids are selectively amplified using PCR and subsequently sequenced to detect, characterise, or quantify viral populations",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102188,,,,,,,,,,,,,,2026-04-13T19:52:38.515Z,,,,,,,,,,,,,,,,,,,Viral amplicon sequencing,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An amplicon sequencing assay in which one or more genomic regions of viral nucleic acids are selectively amplified using PCR and subsequently sequenced to detect, characterise, or quantify viral populations",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_6472,lincomycin,,A carbohydrate-containing antibiotic produced by the actinomyces <em>Streptomyces lincolnensis</em>.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:6472,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,lincomycin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A carbohydrate-containing antibiotic produced by the actinomyces <em>Streptomyces lincolnensis</em>.,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0005335,colorectal neoplasm,tumour of the large bowel|tumour of large bowel|tumour of colorectum|tumor of the large bowel|tumor of large bowel|tumor of colorectum|neoplasm of the large bowel|neoplasm of large bowel|neoplasm of colorectum|large intestine tumour|large intestine tumor|large intestine neoplasm|large intestinal neoplasm|large bowel tumour|large bowel tumor|large bowel neoplasm|colorectum tumour|colorectum tumor|colorectum neoplasm (disease)|colorectum neoplasm|colorectal tumour|colorectal tumor|colorectal neoplasm,"A benign or malignant neoplasm that affects the colon or rectum. Representative examples of benign neoplasms include lipoma and leiomyoma. Representative examples of malignant neoplasms include carcinoma, lymphoma, and sarcoma. Colorectal adenomas always exhibit epithelial dysplasia and are considered premalignant neoplasms.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0009404|NCIT:C2956|MESH:D015179|MEDGEN:3171|EFO:0004142,,,,,,,,,,,,,,,,,,,,,,,MONDO:0021236,,tumour of the large bowel|tumour of large bowel|tumour of colorectum|tumor of the large bowel|tumor of large bowel|tumor of colorectum|neoplasm of the large bowel|neoplasm of large bowel|neoplasm of colorectum|large intestine tumour|large intestine tumor|large intestine neoplasm|large intestinal neoplasm|large bowel tumour|large bowel tumor|large bowel neoplasm|colorectum tumour|colorectum tumor|colorectum neoplasm (disease)|colorectum neoplasm|colorectal tumour|colorectal tumor|colorectal neoplasm,,,,MONDO:0005335,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,colorectal neoplasm,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A benign or malignant neoplasm that affects the colon or rectum. Representative examples of benign neoplasms include lipoma and leiomyoma. Representative examples of malignant neoplasms include carcinoma, lymphoma, and sarcoma. Colorectal adenomas always exhibit epithelial dysplasia and are considered premalignant neoplasms.",,,,,,,,
http://purl.obolibrary.org/obo/ENVO_02000140,fluid environmental material,fluid,An environmental material which is unable to resist shear forces and continuously deforms when subject to them.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,fluid,,,ENVO:02000140,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,fluid environmental material,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental material which is unable to resist shear forces and continuously deforms when subject to them.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001606,contact specification - person,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001606,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,contact specification - person,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"order:
NCIT:C40974 # first name
NCIT:C40975 # last name
NCIT:C42775 # email address
GENEPIO:0001756 # phone",,,,,
http://purl.obolibrary.org/obo/STATO_0000524,Matthews correlation coefficient,,"Matthews Correlation Coefficient (or MCC) is a correlation coefficient which is a measure of the quality of binary (two-class) classifications, introduced by biochemist Brian W. Matthews in 1975.",FALSE,,,,,,,phi coefficient,,,,,,,,,,,,,,"adapted from wikipedia:
https://en.wikipedia.org/wiki/Matthews_correlation_coefficient

and from:
https://doi.org/10.1016/0005-2795(75)90109-9",,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000524,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,Matthews correlation coefficient,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra,,,,"Matthews Correlation Coefficient (or MCC) is a correlation coefficient which is a measure of the quality of binary (two-class) classifications, introduced by biochemist Brian W. Matthews in 1975.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03412974,liquid chemical food component,,A chemical food component in liquid form.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=B2974,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03412974,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,liquid chemical food component,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A chemical food component in liquid form.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510242,polyunsaturated fat claim,,COMMISSION REGULATION (EU) No 116/2010 of 9 February 2010 amending Regulation (EC) No 1924/2006 of the European Parliament and of the Council with regard to the list of nutrition claims,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0242,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510242,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,polyunsaturated fat claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,COMMISSION REGULATION (EU) No 116/2010 of 9 February 2010 amending Regulation (EC) No 1924/2006 of the European Parliament and of the Council with regard to the list of nutrition claims,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510252,woman as food consumer,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0252,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510252,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,woman as food consumer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00005074,Province (Democratic Republic of Congo),,"The provinces are under reorganization, this list is part new part old. See: http://www.statoids.com/ucd.html",FALSE,,,,,,,,,,,,,,"The provinces are under reorganization, this list is part new part old. See: http://www.statoids.com/ucd.html",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00005074,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Province (Democratic Republic of Congo),http://purl.obolibrary.org/obo/GAZ_00001086,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00005075,"populated place, Democratic Republic of Congo",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00005075,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Democratic Republic of Congo",http://purl.obolibrary.org/obo/GAZ_00001086,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0012287,Rathkes pouch epithelium,,An epithelial sac that is part of a Rathke's pouch.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,EMAPA:25036|EHDAA2:0001473,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0012287,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,Rathkes pouch epithelium,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An epithelial sac that is part of a Rathke's pouch.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02022317,elk retail cut (raw),,A raw elk retail cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02022317,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,elk retail cut (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw elk retail cut.,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0005404,myalgic encephalomeyelitis/chronic fatigue syndrome,systemic exertion intolerance disease|myalgic encephalomyelitis|myalgic encephalitis|chronic fatigue syndrome|chronic fatigue immune dysfunction syndrome|CFS,A medical condition characterized by long-term fatigue and other symptoms that limit a person's ability to carry out ordinary daily activities.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0015674|SCTID:51771007|Orphanet:1983|NCIT:C3037|MESH:D015673|MEDGEN:5130|ICD9:780.79|ICD9:780.71|EFO:0004540|DOID:8544,,,,,,,,,,,,,,,,,,,,,,,,,systemic exertion intolerance disease|myalgic encephalomyelitis|myalgic encephalitis|chronic fatigue syndrome|chronic fatigue immune dysfunction syndrome|CFS,,,,MONDO:0005404,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar|http://purl.oboInOwllibrary.org/oboInOwl/mondo#doid_rare,,,,,,,,myalgic encephalomeyelitis/chronic fatigue syndrome,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A medical condition characterized by long-term fatigue and other symptoms that limit a person's ability to carry out ordinary daily activities.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530022,flank,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0022,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530022,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,flank,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530131,raquette,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0131,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530131,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,raquette,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00003344,chicken fillet,,A butchery cut of chicken that is typically boneless.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00003344,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,chicken fillet,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A butchery cut of chicken that is typically boneless.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00003765,Province (Cuba),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00003765,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Province (Cuba),http://purl.obolibrary.org/obo/GAZ_00062289,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00003763,"populated place, Cuba",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00003763,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Cuba",http://purl.obolibrary.org/obo/GAZ_00062289,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100438,host origin geo loc name country,host_origin geo_loc_name (country)|host origin geographical location name|host origin geo loc name (country),A host geographical location field which describes the country of origin of the host.,FALSE,,,,,,,PCDS:host_origin_geo_loc_name_country,,,,,,,"PCDS: If a sample is from a human or animal host that originated from outside of Canada, provide the the name of the country where the host originated by selecting a value from the template pick list. If the information is unknown or cannot be provided, leave blank or provide a null value.",,,,,,,,,,,,,,PCDS: South Africa [GAZ:00001094],,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,host_origin geo_loc_name (country)|host origin geographical location name|host origin geo loc name (country),host origin geographical location name slot|host origin geographical location name field|host origin geo loc name (country) slot,,,,GENEPIO:0100438,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,host origin geo loc name country,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A host geographical location field which describes the country of origin of the host.,,PCDS: The country of origin of the host.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100769,sample volume measurement unit,sample volume measurement unit,A data field which describes the unit of the volume measurement of the sample collected.,FALSE,,,,,,,PCDS:sample_volume_measurement_unit,,,,,,,PCDS: Provide the units from the pick list.,,,,,,,,,,,,,,PCDS: mL,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,sample volume measurement unit,sample volume measurement unit slot,,,,GENEPIO:0100769,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-21T01:14:47.111Z,,,,,,,,,,,,,,,,,,,sample volume measurement unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the unit of the volume measurement of the sample collected.,,PCDS: The units of the volume measurement of the sample collected.,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000403,piece of beef,,A piece of animal meat that is derived from cow.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000403,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of beef,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A piece of animal meat that is derived from cow.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001714,Apal,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001714,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Apal,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C17828,Biological Process,Biological Process|Biological Function,"An activity occurring within an organism, between organisms or among organisms and the mechanisms underlying such events.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Biological Process|Biological Function,,,,NCIT:C17828,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Biological Process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An activity occurring within an organism, between organisms or among organisms and the mechanisms underlying such events.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_63627,tinidazole,,"1<em>H</em>-imidazole substituted at C-1 by a (2-ethylsulfonyl)ethyl group, at C-2 by a methyl group and at C-5 by a nitro group.  It is used as an antiprotozoal, antibacterial agent.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:32227,,,,,,CHEBI:63627,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,tinidazole,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"1<em>H</em>-imidazole substituted at C-1 by a (2-ethylsulfonyl)ethyl group, at C-2 by a methyl group and at C-5 by a nitro group.  It is used as an antiprotozoal, antibacterial agent.",,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00003138,"populated place, contiguous United States of America",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00003138,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, contiguous United States of America",http://purl.obolibrary.org/obo/GAZ_00003937,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01001199,terrestrial environmental zone,,An environmental zone which is bounded by material parts of a land mass or the atmosphere or space adjacent to it.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01001199,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,terrestrial environmental zone,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental zone which is bounded by material parts of a land mass or the atmosphere or space adjacent to it.,,,,,,,,
http://purl.obolibrary.org/obo/GO_0051179,localization,establishment and maintenance of substrate location|establishment and maintenance of substance location|establishment and maintenance of cellular component location,"Any process in which a cell, a substance, or a cellular entity, such as a protein complex or organelle, is transported, tethered to or otherwise maintained in a specific location. In the case of substances, localization may also be achieved via selective degradation.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GO:1902578,,localisation|establishment and maintenance of position|establishment and maintenance of localization,establishment and maintenance of substrate location|establishment and maintenance of substance location|establishment and maintenance of cellular component location,,,GO:0051179,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/go.owl,http://purl.oboInOwllibrary.org/oboInOwl/go#goslim_pir|http://purl.oboInOwllibrary.org/oboInOwl/go#gocheck_do_not_annotate,,,,,,,,localization,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Any process in which a cell, a substance, or a cellular entity, such as a protein complex or organelle, is transported, tethered to or otherwise maintained in a specific location. In the case of substances, localization may also be achieved via selective degradation.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_24532,organic heterocyclic compound,,A cyclic compound having as ring members atoms of carbon and at least of one other element.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:24532,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,organic heterocyclic compound,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A cyclic compound having as ring members atoms of carbon and at least of one other element.,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0000270,lower respiratory tract disorder,lower respiratory tract disease or disorder|lower respiratory tract disease|disorder of lower respiratory tract|disease or disorder of lower respiratory tract|disease of lower respiratory tract,A disease involving the lower respiratory tract.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,icd11.foundation:1582386590|UMLS:C1290325|SCTID:128272009|MEDGEN:712703|ICD9:478.19|ICD9:478.1|EFO:0009433|DOID:0050161,,,,,,,,,,,,,,,,,,,,,,,,,lower respiratory tract disease or disorder|lower respiratory tract disease|disorder of lower respiratory tract|disease or disorder of lower respiratory tract|disease of lower respiratory tract,,,,MONDO:0000270,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,lower respiratory tract disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A disease involving the lower respiratory tract.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100857,eden-v1 strategy,,An amplicon strategy which was developed by John-Sebastian Eden with primers for SARS-CoV-2 and attributes of version 1.0.0 which produces amplicons approximately 2500bp in length.,FALSE,,,,,,,eden-v1|eden v1,,,,,,,,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100857,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2026-04-13T19:52:38.515Z,,,,,,,,,,,,,,,,,,,eden-v1 strategy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An amplicon strategy which was developed by John-Sebastian Eden with primers for SARS-CoV-2 and attributes of version 1.0.0 which produces amplicons approximately 2500bp in length.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_38295,azabicycloalkane,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:38295,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,azabicycloalkane,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_59343,cefditoren,,"A broad spectrum, third-generation cephalosporin antibiotic with (<i>Z</i>)-2-(4-methyl-1,3-thiazol-5-yl)ethenyl and (2<i>Z</i>)-2-(2-amino-1,3-thiazol-4-yl)-2-(methoxyimino)acetamido groups at positions 3 and 7, respectively, of the cephem skeleton. Generally administered as its orally absorbed pivaloyloxymethyl ester prodrug, it is used for the treatment of mild to moderate infections caused by susceptible strains of microorganisms in acute bacterial exacerbation of chronic bronchitis, community-acquired pneumonia, pharyngitis/tonsillitis, and uncomplicated skin and skin-structure infections.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:59343,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,cefditoren,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A broad spectrum, third-generation cephalosporin antibiotic with (<i>Z</i>)-2-(4-methyl-1,3-thiazol-5-yl)ethenyl and (2<i>Z</i>)-2-(2-amino-1,3-thiazol-4-yl)-2-(methoxyimino)acetamido groups at positions 3 and 7, respectively, of the cephem skeleton. Generally administered as its orally absorbed pivaloyloxymethyl ester prodrug, it is used for the treatment of mild to moderate infections caused by susceptible strains of microorganisms in acute bacterial exacerbation of chronic bronchitis, community-acquired pneumonia, pharyngitis/tonsillitis, and uncomplicated skin and skin-structure infections.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03450036,steeping,,"Extracting flavor and other components from food sources by immersion in water, usually at near-boiling temperature.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=G0036,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03450036,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,steeping,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Extracting flavor and other components from food sources by immersion in water, usually at near-boiling temperature.",,,,,,,,
http://purl.obolibrary.org/obo/OBI_0000706,SOLiD sequencing assay,,"A DNA sequencing by ligation assay that identifies sequence information using primers to hybridize to the P1 adapter sequence within the library template, fluorescently labeled di-base probes to compete for ligation to the sequencing primer, multiple cycles of ligation, detection and cleavage to determine the eventual read length, following a series of ligation cycles, the extension product is removed and the template is reset with a primer complementary to the n-1 position for a second round of ligation cycles.",FALSE,,,,,,,,,,,,,,,,,,,,,url:https://en.wikipedia.org/wiki/ABI_Solid_Sequencing,,,,,SOLiD sequencing assay,,"PMID: 19119315. High-resolution analysis of the 5'-end transcriptome using a next generation DNA sequencer. Hashimoto S, Qu W, Ahsan B, Ogoshi K, Sasaki A, Nakatani Y, Lee Y, Ogawa M, Ametani A, Suzuki Y, Sugano S, Lee CC, Nutter RC, Morishita S, Matsushima K. PLoS One. 2009;4(1):e4108.",,,http://purl.obolibrary.org/obo/IAO_0000120,NCBI SRA: ABI_SOLID,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0000706,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SOLiD sequencing assay,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra,,,,"A DNA sequencing by ligation assay that identifies sequence information using primers to hybridize to the P1 adapter sequence within the library template, fluorescently labeled di-base probes to compete for ligation to the sequencing primer, multiple cycles of ligation, detection and cleavage to determine the eventual read length, following a series of ligation cycles, the extension product is removed and the template is reset with a primer complementary to the n-1 position for a second round of ligation cycles.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001076,O antigen,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Snomed: Concept 260827009,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001076,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,O antigen,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03460331,food interior mold curing,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=H0331,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03460331,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food interior mold curing,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FIX_0000278,redox potential,,"Redox potential, measured relative to a hydrogen cell, indicating oxidation or reduction potential",FALSE,,,,,,,oxidation-reduction potential|E',,,,,,,,,,,,,,MIxS,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FIX:0000278,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/fix.owl,,,,,,,,,redox potential,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Redox potential, measured relative to a hydrogen cell, indicating oxidation or reduction potential",,,,,,,,
http://purl.obolibrary.org/obo/GSSO_000127,transgender and gender nonconforming,,An umbrella term often used in medical literature to include transgender persons and gender nonconforming people who may or may not be transgender.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GSSO:000127,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gsso.owl,,,,,,,,,transgender and gender nonconforming,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An umbrella term often used in medical literature to include transgender persons and gender nonconforming people who may or may not be transgender.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490208,multicontainer package,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0208,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490208,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,multicontainer package,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/OBA_2055789,age of onset of cor pulmonale,age cor pulmonale symptoms begin|age at onset of cor pulmonale,The age at which cor pulmonale manifestations first appear.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,age cor pulmonale symptoms begin|age at onset of cor pulmonale,,,,OBA:2055789,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age of onset of cor pulmonale,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The age at which cor pulmonale manifestations first appear.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001260,obsolete: swab,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001260,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: swab,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/NCIT_C17627,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_2012,African reference superpopulation (SGDP),Africa (SGDP),A reference population made up of samples from individuals with an African Ancestry as part of the Simons Genome Diversity Project.,FALSE,,,,,,,,,,,,,,This category was created to facilitate the grouping of reference populations into the superpopulations they were allocated to in the context of the project in which they were collected. This classification is intended for project provenance traceability and does not imply any kind of biological difference.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Africa (SGDP),,,,HANCESTRO:2012,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,African reference superpopulation (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A reference population made up of samples from individuals with an African Ancestry as part of the Simons Genome Diversity Project.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_2015,East Asian reference superpopulation (SGDP),East Asia (SGDP),A reference population made up of samples from individuals with an East Asian Ancestry as part of the Simons Genome Diversity Project.,FALSE,,,,,,,,,,,,,,This category was created to facilitate the grouping of reference populations into the superpopulations they were allocated to in the context of the project in which they were collected. This classification is intended for project provenance traceability and does not imply any kind of biological difference.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,East Asia (SGDP),,,,HANCESTRO:2015,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,East Asian reference superpopulation (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A reference population made up of samples from individuals with an East Asian Ancestry as part of the Simons Genome Diversity Project.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_2014,Central Asian and Siberia reference superpopulation (SGDP),Central Asia and Siberia (SGDP),A reference population made up of samples from individuals with a Central Asian and Siberia Ancestry as part of the Simons Genome Diversity Project.,FALSE,,,,,,,,,,,,,,This category was created to facilitate the grouping of reference populations into the superpopulations they were allocated to in the context of the project in which they were collected. This classification is intended for project provenance traceability and does not imply any kind of biological difference.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Central Asia and Siberia (SGDP),,,,HANCESTRO:2014,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Central Asian and Siberia reference superpopulation (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A reference population made up of samples from individuals with a Central Asian and Siberia Ancestry as part of the Simons Genome Diversity Project.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_2011,Oceanian reference superpopulation (HGDP),Oceania (HGDP),A reference population made up of samples from individuals with an Oceanian Ancestry as part of the Human Genome Diversity Project.,FALSE,,,,,,,,,,,,,,This category was created to facilitate the grouping of reference populations into the superpopulations they were allocated to in the context of the project in which they were collected. This classification is intended for project provenance traceability and does not imply any kind of biological difference.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Oceania (HGDP),,,,HANCESTRO:2011,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Oceanian reference superpopulation (HGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A reference population made up of samples from individuals with an Oceanian Ancestry as part of the Human Genome Diversity Project.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_2017,South Asian reference superpopulation (SGDP),South Asia (SGDP),A reference population made up of samples from individuals with a South Asian Ancestry as part of the Simons Genome Diversity Project.,FALSE,,,,,,,,,,,,,,This category was created to facilitate the grouping of reference populations into the superpopulations they were allocated to in the context of the project in which they were collected. This classification is intended for project provenance traceability and does not imply any kind of biological difference.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,South Asia (SGDP),,,,HANCESTRO:2017,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,South Asian reference superpopulation (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A reference population made up of samples from individuals with a South Asian Ancestry as part of the Simons Genome Diversity Project.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_2013,American reference superpopulation (SGDP),America (SGDP),A reference population made up of samples from individuals with an American Ancestry as part of the Simons Genome Diversity Project.,FALSE,,,,,,,,,,,,,,This category was created to facilitate the grouping of reference populations into the superpopulations they were allocated to in the context of the project in which they were collected. This classification is intended for project provenance traceability and does not imply any kind of biological difference.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,America (SGDP),,,,HANCESTRO:2013,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,American reference superpopulation (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A reference population made up of samples from individuals with an American Ancestry as part of the Simons Genome Diversity Project.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_2016,Oceanian reference superpopulation (SGDP),Oceania (SGDP),A reference population made up of samples from individuals with an Oceanian Ancestry as part of the Simons Genome Diversity Project.,FALSE,,,,,,,,,,,,,,This category was created to facilitate the grouping of reference populations into the superpopulations they were allocated to in the context of the project in which they were collected. This classification is intended for project provenance traceability and does not imply any kind of biological difference.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Oceania (SGDP),,,,HANCESTRO:2016,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Oceanian reference superpopulation (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A reference population made up of samples from individuals with an Oceanian Ancestry as part of the Simons Genome Diversity Project.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_2010,Middle East reference superpopulation (HGDP),Middle East (HGDP),A reference population made up of samples from individuals with a Middle East Ancestry as part of the Human Genome Diversity Project.,FALSE,,,,,,,,,,,,,,This category was created to facilitate the grouping of reference populations into the superpopulations they were allocated to in the context of the project in which they were collected. This classification is intended for project provenance traceability and does not imply any kind of biological difference.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Middle East (HGDP),,,,HANCESTRO:2010,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Middle East reference superpopulation (HGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A reference population made up of samples from individuals with a Middle East Ancestry as part of the Human Genome Diversity Project.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0534,Gabonese,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0534,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Gabonese,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0530,Ivoirian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0530,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Ivoirian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0537,Guinean,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0537,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Guinean,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0531,Djiboutian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0531,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Djiboutian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0533,Eritrean,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0533,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Eritrean,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0532,Equatorial Guinean,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0532,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Equatorial Guinean,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0538,Bissau-Guinean,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0538,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Bissau-Guinean,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0539,Mosotho,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0539,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Mosotho,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0535,Gambian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0535,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Gambian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0536,Ghanaian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0536,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Ghanaian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/IAO_0000408,length measurement datum,,A scalar measurement datum that is the result of measurement of length quality,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,IAO:0000408,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/iao.owl,,,,,,,,,length measurement datum,,,,,,,,,,,,,,,,,,,,,,,,,,,,Alan Ruttenberg,,,,A scalar measurement datum that is the result of measurement of length quality,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03480010,packed in vinegar with sugar,,A mixture of vinegar and sugar which are used as a packing medium for food material.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=K0010,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03480010,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,packed in vinegar with sugar,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A mixture of vinegar and sugar which are used as a packing medium for food material.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100570,low average genome coverage datum,,"A data item that describes sequence data in which the entire length of the genome is not sufficiently sequenced (low breadth of coverage), or particular positions of the genome are not sequenced a prescribed number of times (low depth of coverage).",FALSE,,,,,,,low average genome coverage,,,,,,,,,,,,,,,,,,,,,,,,ready for release,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100570,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-1107-9135,2023-01-23T00:42:19.315Z,,,,,,,,,,,,,,,,,,,low average genome coverage datum,,,,,,,,,,,,,,,,,,,,,,The PHA4GE QC Contextual Data Tags Specification: https://github.com/pha4ge/contextual-data-qc-tags,,,,,,,,,,"A data item that describes sequence data in which the entire length of the genome is not sufficiently sequenced (low breadth of coverage), or particular positions of the genome are not sequenced a prescribed number of times (low depth of coverage).",,,,,,,,
http://purl.obolibrary.org/obo/GSSO_004004,transfeminine,trans feminine,Having a feminine gender (identity) which is different from the sex one was assigned at birth.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://www.wikidata.org/wiki/Q27679684|https://mogai-genders.fandom.com/wiki/Transfeminine|https://en.wikipedia.org/wiki/Transfeminine,,,,,,,,,,,,,,,,,,,,,,,,,trans feminine,,,,GSSO:004004,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gsso.owl,,,,,,,,,transfeminine|transfeminin|transfemenino,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Having a feminine gender (identity) which is different from the sex one was assigned at birth.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00008583,"populated place, Azores",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00008583,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Azores",http://purl.obolibrary.org/obo/GAZ_00000847,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000753,obsolete air temperature,,A temperature that inheres in some portion of air.,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01000753,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,obsolete air temperature,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:09200001,,,A temperature that inheres in some portion of air.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_25061,lipopeptide antibiotic,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:25061,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,lipopeptide antibiotic,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_38445,chromenone,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:38445,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,chromenone,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_9913,Bos taurus,,,FALSE,,,,,,,ox|domestic cow|domestic cattle|dairy cow|cow|bovine,,,,,,,,,,,,,,,,,,,Bos taurus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:9913,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Bos taurus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038930,prelaryngeal lymph node,prelaryngeal node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:61234,,,,,,,,,,,,,,,,,,,,,,,,,prelaryngeal node,,,,UBERON:0038930,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,prelaryngeal lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038932,pretracheal lymph node,pretracheal node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:61236,,,,,,,,,,,,,,,,,,,,,,,,,pretracheal node,,,,UBERON:0038932,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,pretracheal lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038931,thyroid lymph node,thyroid node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:61235,,,,,,,,,,,,,,,,,,,,,,,,,thyroid node,,,,UBERON:0038931,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,thyroid lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038936,jugulodigastric lymph node,nodus lymphoideus jugulodigastricus|nodus jugulodigastricus|jugulodigastric node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:61240,,,,,,,,,,,,,,,,,,,,,,,,,nodus lymphoideus jugulodigastricus|nodus jugulodigastricus|jugulodigastric node,,,,UBERON:0038936,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,jugulodigastric lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038935,inferior deep lateral cervical lymph node,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:61239,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0038935,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,inferior deep lateral cervical lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038938,accessory cervical lymph node,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:61242,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0038938,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,accessory cervical lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038934,superior deep lateral cervical lymph node,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:61238,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0038934,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,superior deep lateral cervical lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000012,hydrographic feature,,A geographical feature associated with water.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Geonames:H.OVF|FTT:829|FTT:828|FTT:827|FTT:826|FTT:825|FTT:824|FTT:761|FTT:711|FTT:280|FTT:131,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00000012,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,envoPolar,,,,,,,,hydrographic feature,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A geographical feature associated with water.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C79426,Cancer Diagnostic or Therapeutic Procedure,Cancer Diagnostic or Therapeutic Procedure,Any procedure for diagnosis or treatment of cancer.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Cancer Diagnostic or Therapeutic Procedure,,,,NCIT:C79426,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Cancer Diagnostic or Therapeutic Procedure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any procedure for diagnosis or treatment of cancer.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020514,piece of turkey breast,,A piece of a turkey breast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020514,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of turkey breast,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A piece of a turkey breast.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100752,specimen collector subsample id,specimen collector subsample ID,An identifier field which describes the user defined name for a portion of the original sample.,FALSE,,,,,,,PCDS:specimen_collector_subsample_id,,,,,,,PCDS: Store the ID for the subsample/aliquot.,,,,,,,,,,,Drafted 2023-07-27,,,PCDS: ASDFG123_12,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,specimen collector subsample ID,sample collector sub-sample identifer slot|sample collector sub-sample ID slot,,,,GENEPIO:0100752,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-20T20:25:24.926Z,,,,,,,,,,,,,,,,,,,specimen collector subsample id,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An identifier field which describes the user defined name for a portion of the original sample.,,PCDS: The user-defined identifier assigned to a portion of the original sample.,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000265,lamb sirloin chop (raw),,A raw lamb sirloin chop.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000265,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lamb sirloin chop (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw lamb sirloin chop.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001958,RANDOM method,,Random selection by shearing or other method.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI SRA: RANDOM,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001958,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,RANDOM method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Random selection by shearing or other method.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000031,subject sex specification,,"A subject sex is the phenotypic sex of given subject (human or animal) related to a given investigation, study, and/or specimen.",FALSE,,,,,,,,,,,,,,Gender is not used because it is a term referencing human social and cultural convention.,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000031,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,subject sex specification,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/PATO_0001894,,,,Damion Dooley,,,,"A subject sex is the phenotypic sex of given subject (human or animal) related to a given investigation, study, and/or specimen.",,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000970,delicatessen,deli,A food shop which sells a selection of food products that are not typical dietary components of the human population it is co-located with.,FALSE,,,,,,,,,,,,,,The food products sold in a delicatessen are often considered unusual by the majority of its customers and may come from foreign food supplies which are not widely imported into its region of operation.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,deli,,,,ENVO:01000970,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,delicatessen,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A food shop which sells a selection of food products that are not typical dietary components of the human population it is co-located with.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001648,NCBI Contributing organization / project,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"This was created to help define a contributing organization to a repository.  However this still needs organizing. The ""collected_by"" field is free text but contact name AND organization could be associated with this in controlled vocabulary.",,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001648,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI Contributing organization / project,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/OMIT_0007017,Genetic Techniques,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OMIT:0007017,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/omit.owl,,,,,,,,,Genetic Techniques,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000220,false negative rate,,the false negative rate is a data item which denotes the proportion of missed detection of elements known to be meeting the detection criteria,FALSE,,,,,,,,,,,,,,,,,,,,,"STATO, adapted from",,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000220,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,false negative rate,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra|Alejandra Gonzalez-Beltran|Orlaith Burke,,,,the false negative rate is a data item which denotes the proportion of missed detection of elements known to be meeting the detection criteria,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001412,destination of most recent travel state province territory,destination of most recent travel (state/province/territory),A geographical data field which describes the name of the province that was the destination of most recent travel.,FALSE,,,,,,,PCDS:destination_of_most_recent_travel_state_province_territory,,,,,,,PCDS: Select the province name from the pick list provided in the template.,,,,,,,,,,,,,,PCDS: California,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,destination of most recent travel (state/province/territory),destination state or province or territory of most recent travel slot|destination state or province or territory of most recent travel field|destination of most recent travel (state/province/territory) slot,,,,GENEPIO:0001412,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,destination of most recent travel state province territory,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A geographical data field which describes the name of the province that was the destination of most recent travel.,,PCDS: The name of the province that was the destination of most recent travel.,,,,,,
http://purl.obolibrary.org/obo/FOODON_03450031,heating container by immersion in water or steam,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=G0031,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03450031,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,heating container by immersion in water or steam,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0005718,Coronaviridae infectious disease,,Virus diseases caused by coronaviridae.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0010078|MEDGEN:40491|EFO:0007223,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MONDO:0005718,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,Coronaviridae infectious disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Virus diseases caused by coronaviridae.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0012236,intercostal lymph node,nodus intercostale|nodi lymphoidei intercostales|intercostal node,"The intercostal lymph nodes (intercostal glands ) occupy the posterior parts of the intercostal spaces, in relation to the intercostal vessels. They receive the deep lymphatics from the postero-lateral aspect of the chest; some of these vessels are interrupted by small lateral intercostal glands.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Intercostal_lymph_nodes|UMLS:C0229761|SCTID:204088001|NCIT:C77652|FMA:5932,,,,,,,,,,,,,,,,,,,,,,,,,nodus intercostale|nodi lymphoidei intercostales|intercostal node,,,,UBERON:0012236,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,intercostal lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The intercostal lymph nodes (intercostal glands ) occupy the posterior parts of the intercostal spaces, in relation to the intercostal vessels. They receive the deep lymphatics from the postero-lateral aspect of the chest; some of these vessels are interrupted by small lateral intercostal glands.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470128,food slow freezing,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0128,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470128,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food slow freezing,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C111860,Maternal Mortality,Maternal Mortality|Maternal Death,"The death of a woman while pregnant or within 42 days of the end of the pregnancy, irrespective of the duration or anatomic site of the pregnancy, due to any cause related to or aggravated by the pregnancy or its management, but not from accidental or incidental causes.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Maternal Mortality|Maternal Death,,,,NCIT:C111860,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Maternal Mortality,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The death of a woman while pregnant or within 42 days of the end of the pregnancy, irrespective of the duration or anatomic site of the pregnancy, due to any cause related to or aggravated by the pregnancy or its management, but not from accidental or incidental causes.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_88187,penicillin allergen,,Any penicillin which causes the onset of an allergic reaction.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:88187,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,penicillin allergen,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any penicillin which causes the onset of an allergic reaction.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510041,cholesterol special claim,,"All narrower term definitions extracted from 58 Federal Register 2302, January 6, 1993, part 101.62(d).",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0041,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510041,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,cholesterol special claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"All narrower term definitions extracted from 58 Federal Register 2302, January 6, 1993, part 101.62(d).",,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01001828,anthropised ecosystem,,An ecosystem which is formed as a result of human activity or impact.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01001828,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,anthropised ecosystem,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An ecosystem which is formed as a result of human activity or impact.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C28421,Sex,sex|Sex for Clinical Use|Sex Parameter for Clinical Use|Sex Designation|Sex|SPCU|SEX,"An arbitrary categorization of individuals based on the assemblage of physical properties related to reproduction, and commonly associated with the designation of such categories as female and male. This designation is based on a combination of observable information from organ inventories, morphological assessments, hormone assessments, genetic testing, observed primary and secondary sex characteristics, menstrual status, and/or obstetric history. Current sex designation may or may not be the same as an individual's sex assigned or reported at birth.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,sex|Sex for Clinical Use|Sex Parameter for Clinical Use|Sex Designation|Sex|SPCU|SEX,,,,NCIT:C28421,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Sex,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An arbitrary categorization of individuals based on the assemblage of physical properties related to reproduction, and commonly associated with the designation of such categories as female and male. This designation is based on a combination of observable information from organ inventories, morphological assessments, hormone assessments, genetic testing, observed primary and secondary sex characteristics, menstrual status, and/or obstetric history. Current sex designation may or may not be the same as an individual's sex assigned or reported at birth.",,,,,,,,
http://purl.obolibrary.org/obo/ENVO_03501194,long-term care facility,long-term care centre|long-term care center|LTC facility|LTC centre|LTC center,A residential building which is used to provides long-term care for residents.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,long-term care centre|long-term care center|LTC facility|LTC centre|LTC center,,,,ENVO:03501194,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,long-term care facility,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A residential building which is used to provides long-term care for residents.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02010117,"piece of animal meat (with bone, raw)",,A raw piece of animal meat that contains bone material.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02010117,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"piece of animal meat (with bone, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw piece of animal meat that contains bone material.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100199,funeral home exposure process,,A process occuring within or in the vicinity of a fgroup home that exposes the recipient organism to a material entity.,FALSE,,,,,,,Funeral Home,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100199,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,funeral home exposure process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A process occuring within or in the vicinity of a fgroup home that exposes the recipient organism to a material entity.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03602001,label claim,,A food datum indicating a claim presented in a label.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0160,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03602001,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,label claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A food datum indicating a claim presented in a label.,,,,,,,,
http://purl.obolibrary.org/obo/OGMS_0000104,diagnostic process,,"A health care process that involves the interpretation of a clinical picture from a given patient (input) and the assertion to the effect that the patient has a disease, disorder, or syndrome of a certain type, or none of these (output).",FALSE,,,,,,,,,,,,,,,,,,,,,http://groups.google.com/group/ogms-discuss/browse_thread/thread/2a7008f311fac766/e7de486c94dfd82e,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OGMS:0000104,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ogms.owl,,,,,,,,,diagnostic process,,,,,,,,,,,,,,,,,,,,,,,,,,,,Albert Goldfain,,,,"A health care process that involves the interpretation of a clinical picture from a given patient (input) and the assertion to the effect that the patient has a disease, disorder, or syndrome of a certain type, or none of these (output).",,,,,,,,
http://purl.obolibrary.org/obo/DOID_13276,Mycoplasma pneumoniae pneumonia,,"A bacterial pneumonia that is caused by the bacterial species Mycoplasma pneumoniae. The symptoms include chest pain, chills, dry cough which is not bloody, excessive sweating, fever, headache and sore throat.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:13276,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,Mycoplasma pneumoniae pneumonia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A bacterial pneumonia that is caused by the bacterial species Mycoplasma pneumoniae. The symptoms include chest pain, chills, dry cough which is not bloody, excessive sweating, fever, headache and sore throat.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_13272,Klebsiella pneumonia,,"A bacterial pneumonia involving Klebsiella pneumoniae infection. Patients with Klebsiella pneumonia tend to cough up a characteristic sputum that is said to resemble red-currant jelly. Klebsiella pneumonia tends to affect people with underlying diseases, such as alcoholism, diabetes and chronic lung disease. The symptoms include high fever, rigors and pleuritic pain, and hemoptysis.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:13272,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,Klebsiella pneumonia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A bacterial pneumonia involving Klebsiella pneumoniae infection. Patients with Klebsiella pneumonia tend to cough up a characteristic sputum that is said to resemble red-currant jelly. Klebsiella pneumonia tends to affect people with underlying diseases, such as alcoholism, diabetes and chronic lung disease. The symptoms include high fever, rigors and pleuritic pain, and hemoptysis.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_24995,lactam,,"Cyclic amides of amino carboxylic acids, having a 1-azacycloalkan-2-one structure, or analogues having unsaturation or heteroatoms replacing one or more carbon atoms of the ring.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:24995,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,lactam,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Cyclic amides of amino carboxylic acids, having a 1-azacycloalkan-2-one structure, or analogues having unsaturation or heteroatoms replacing one or more carbon atoms of the ring.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100575,low coverage of characteristic mutations datum,,A data item that describes sequence data that contains a lower than expected number of mutations that are usually observed in the reference sequence.,FALSE,,,,,,,low coverage of characteristic mutations,,,,,,,,,,,,,,,,,,,,,,,,ready for release,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100575,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-1107-9135,2023-01-23T00:42:19.315Z,,,,,,,,,,,,,,,,,,,low coverage of characteristic mutations datum,,,,,,,,,,,,,,,,,,,,,,The PHA4GE QC Contextual Data Tags Specification: https://github.com/pha4ge/contextual-data-qc-tags,,,,,,,,,,A data item that describes sequence data that contains a lower than expected number of mutations that are usually observed in the reference sequence.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000118,beef short loin,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000118,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef short loin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000116,beef chuck flap/edge roast (raw),,A raw beef chuck flap/edge roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000116,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef chuck flap/edge roast (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef chuck flap/edge roast.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_27666,actinomycin D,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:2446|CHEBI:22218,,,,,,CHEBI:27666,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,actinomycin D,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490231,glass stopper,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0231,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490231,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,glass stopper,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000002,beef bottom round,,A beef cut that comes from the outside of the rear leg.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000002,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef bottom round,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A beef cut that comes from the outside of the rear leg.,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0003620,peripheral nervous system disorder,"peripheral neuropathy|peripheral nerve diseases|peripheral nerve disease|peripheral Neuropathies|neuropathy, peripheral|nerve diseases, peripheral|nerve disease, peripheral",A disease involving the peripheral nervous system.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4025831|SCTID:42658009|NCIT:C27580|MESH:D010523|MEDGEN:892389|ICD9:356.9|ICD9:350-359|EFO:0009387|DOID:574,,,,,,,,,,,,,,,,,,,,,,,,,peripheral nervous system disorders|peripheral nervous system disorder|peripheral nervous system disease or disorder|peripheral nervous system disease|disorder of the peripheral nervous system|disorder of peripheral nervous system|disease or disorder of peripheral nervous system|disease of peripheral nervous system|PNS diseases|PNS disease|PNS (peripheral nervous system) diseases,"peripheral neuropathy|peripheral nerve diseases|peripheral nerve disease|peripheral Neuropathies|neuropathy, peripheral|nerve diseases, peripheral|nerve disease, peripheral",,,MONDO:0003620,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#rare_grouping|http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,peripheral nervous system disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A disease involving the peripheral nervous system.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100276,intra-state/ intra-provincial travel surveillance strategy,,A domestic travel-associated surveillance strategy in which individuals are selected if their travel occurred between states/provinces within a nation.,FALSE,,,,,,,Intra-state/ intra-provincial travel surveillance,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100276,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,intra-state/ intra-provincial travel surveillance strategy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A domestic travel-associated surveillance strategy in which individuals are selected if their travel occurred between states/provinces within a nation.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001822,ASFIS,,"ASFIS is a database curated by the United Nations Food And Agriculture Organization (FAO) Fisheries and Aquaculture Statistics and Information Branch (FIPS). It contains over 12,700 species items selected according to their interest or relation to fisheries and aquaculture.",FALSE,,,,,,,UN FAO Fisheries and Aquaculture Statistics and Information Branch database,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000120,FAO ASFIS,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001822,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ASFIS,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,http://www.fao.org/fishery/collection/asfis/en,,"ASFIS is a database curated by the United Nations Food And Agriculture Organization (FAO) Fisheries and Aquaculture Statistics and Information Branch (FIPS). It contains over 12,700 species items selected according to their interest or relation to fisheries and aquaculture.",,,,,,,,
http://purl.obolibrary.org/obo/OBI_0002752,Oxford Nanopore PromethION,,"A DNA sequencer that is manufactured by the Oxford Nanopore Technologies corporation, capable of running up to 48 flow cells and producing up to 7.6 Tb of data per run. The sequencer produces real-time results and utilizes Nanopore technology, with each flow cell allowing up to 3,000 nanopores to be sequencing simultaneously.",FALSE,,,,,,,PromethION,,,,,,,,,,,,,,https://nanoporetech.com/products/promethion,,,,,Oxford Nanopore PromethION,,Structural variants identified by Oxford Nanopore PromethION sequencing of the human genome.,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0002752,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Oxford Nanopore PromethION,,,,,,,,,,,,,,,,,,,,,,,,,,,,PERSON: Bonita Lam,,,,"A DNA sequencer that is manufactured by the Oxford Nanopore Technologies corporation, capable of running up to 48 flow cells and producing up to 7.6 Tb of data per run. The sequencer produces real-time results and utilizes Nanopore technology, with each flow cell allowing up to 3,000 nanopores to be sequencing simultaneously.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000314,"pork loin country-style ribs (boneless, raw)",,A meat cut that is derived from the boneless blade end of the pork loin.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000314,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"pork loin country-style ribs (boneless, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A meat cut that is derived from the boneless blade end of the pork loin.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0001897,organization of sequencing facility contact person,,An organization that is the affiliation of the contact representative at the sequencing facility,FALSE,,,,,,,,,,,,,,,,,,,,,NIAID GSCID-BRC metadata working group,,,,,organization of sequencing facility contact person,,,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0001897,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,organization of sequencing facility contact person,,,,,,,Sequencing Facility Contact's Institution,,,,,,,,,,,,,,,,,,,,,"PERSON: Chris Stoeckert, Jie Zheng",,,,An organization that is the affiliation of the contact representative at the sequencing facility,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00005522,invertebrate material,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00005522,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,invertebrate material,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000989,plumbing fixture,,An exchangeable device which can be connected to a plumbing system to deliver and drain water.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01000989,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,plumbing fixture,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An exchangeable device which can be connected to a plumbing system to deliver and drain water.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_63353,disaccharide derivative,,A carbohydrate derivative that is formally obtained from a disaccharide.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:63353,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,disaccharide derivative,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A carbohydrate derivative that is formally obtained from a disaccharide.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000602,truck,lorry,"A truck is a motor vehicle which, as its primary funcion, transports cargo rather than human passangers.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,lorry,,,,ENVO:01000602,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,truck,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A truck is a motor vehicle which, as its primary funcion, transports cargo rather than human passangers.",,,,,,,,
http://purl.obolibrary.org/obo/PATO_0040020,spayed female,,Female quality of being incapable to reproduce because of functional loss of the ovaries and/or uterus from surgical removal.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PATO:0040020,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/pato.owl,,,,,,,,,spayed female,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Female quality of being incapable to reproduce because of functional loss of the ovaries and/or uterus from surgical removal.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510198,diabetic or suitable for diabetics claim,,"It should be noted that such claims are illegal in some countries, e.g. Denmark, and that other countries, e.g. United Kingdom, are calling for an end to the use of terms such as 'diabetic' or 'suitable for diabetics' on food labels.
The European Commission is considering how foods intended specifically for people with diabetes can be controlled.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0198,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510198,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,diabetic or suitable for diabetics claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"It should be noted that such claims are illegal in some countries, e.g. Denmark, and that other countries, e.g. United Kingdom, are calling for an end to the use of terms such as 'diabetic' or 'suitable for diabetics' on food labels.
The European Commission is considering how foods intended specifically for people with diabetes can be controlled.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_35213,cyclodepsipeptide,,A depsipeptide in which the amino and hydroxy carboxylic acid residues are connected in a ring.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:35213,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,cyclodepsipeptide,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A depsipeptide in which the amino and hydroxy carboxylic acid residues are connected in a ring.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100098,refractory cardiogenic shock,,A persistent form of cardiogenic shock that presents as persistent tissue hyoperfusion despite administration of adequote doses of vasoactive medications and treatmenft of the underlying aetiology.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100098,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,refractory cardiogenic shock,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A persistent form of cardiogenic shock that presents as persistent tissue hyoperfusion despite administration of adequote doses of vasoactive medications and treatmenft of the underlying aetiology.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100047,medically isolated datum,,Separation of people with a contagious disease from population to reduce the spread of the disease.,FALSE,,,,,,,Mechanical Ventilation,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7338113/,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100047,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,medically isolated datum,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Separation of people with a contagious disease from population to reduce the spread of the disease.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100663,quality control determination enumeration,,A data enumeration which references a set of named quality control determination entities.,FALSE,,,,,,,quality control determination,,,,,,,,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100663,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788,2023-01-23T00:42:19.315Z,,,,,,,,,,,,,,,,,,,quality control determination enumeration,,,,http://purl.obolibrary.org/obo/GENEPIO_0100567|http://purl.obolibrary.org/obo/GENEPIO_0100566|http://purl.obolibrary.org/obo/GENEPIO_0100565|http://purl.obolibrary.org/obo/GENEPIO_0100564|http://purl.obolibrary.org/obo/GENEPIO_0100563|http://purl.obolibrary.org/obo/GENEPIO_0100562,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data enumeration which references a set of named quality control determination entities.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102186,Torpedo passive water sampling device,,"A specimen collection device designed for deployment in aquatic environments, typically with a streamlined shape that enables stable positioning in flowing water while facilitating the accumulation of chemical or biological analytes over time.",FALSE,,,,,,,Torpedo passive water sampler,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102186,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2026-04-13T19:52:38.515Z,,,,,,,,,,,,,,,,,,,Torpedo passive water sampling device,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A specimen collection device designed for deployment in aquatic environments, typically with a streamlined shape that enables stable positioning in flowing water while facilitating the accumulation of chemical or biological analytes over time.",,,,,,,,
http://purl.obolibrary.org/obo/UO_0000315,turbidity unit,,"A unit used to indicate the clarity of water or other solutions or suspensions, as measured by the ability of the solution or suspension to scatter light of a defined wavelength range.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:0000315,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,turbidity unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A unit used to indicate the clarity of water or other solutions or suspensions, as measured by the ability of the solution or suspension to scatter light of a defined wavelength range.",,,,,,,,
http://purl.obolibrary.org/obo/UO_0000318,formazin nephelometric unit,FNU,1000 formazin turbidity units (FNU) on the empirical formazin turbidity scale represents reflectance of insol. reaction products of 0.0725 g hydrazine sulfate with 0.7250 g hexamethylenetetramine diluted to 1 L.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FNU,,,,UO:0000318,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,formazin nephelometric unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,1000 formazin turbidity units (FNU) on the empirical formazin turbidity scale represents reflectance of insol. reaction products of 0.0725 g hydrazine sulfate with 0.7250 g hexamethylenetetramine diluted to 1 L.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0003688,omentum,,A fold of peritoneum originating at the stomach and supporting the viscera.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:Omentum|UMLS:C0028977|SCTID:362710002|NCIT:C33209|MESH:D009852|GAID:23|FMA:14650|EV:0100084|CALOHA:TS-2004,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0003688,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,omentum,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A fold of peritoneum originating at the stomach and supporting the viscera.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100972,MGI DNBSEQ-G99,,"An MGI DNBSEQ instrument model that utilises DNA nanoball sequencing and probe-anchor synthesis for next generation sequencing and which adopts triangular matrix signal spots on sequencing flow cell, for low throughput at highspeeds.",FALSE,,,,,,,DNBSEQ-G99,,,,,,,,,,,,,,https://mgi-tech.eu/sequencing-products/dnbseq-g99,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100972,,,,,,,,,,,,,https://orcid.org/0000-0002-7654-6902|https://orcid.org/0000-0001-8008-8249,2025-03-21T01:14:47.111Z,,,,,,,,,,,,,,,,,,,MGI DNBSEQ-G99,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An MGI DNBSEQ instrument model that utilises DNA nanoball sequencing and probe-anchor synthesis for next generation sequencing and which adopts triangular matrix signal spots on sequencing flow cell, for low throughput at highspeeds.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02021756,pork retail cut (raw),,A raw pork retail cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02021756,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pork retail cut (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw pork retail cut.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100102,not vaccinated,unvaccinated,A vaccination status in which an individual has not completed or initiated a vaccine series authorized and administered according to the regional health institutional guidance.,FALSE,,,,,,,,,,,,,,"In general, people are considered not vaccinated if they have not received a single dose or have not yet completed the 2 weeks after their first dose in a single-dose or multi-dose vaccine series.",,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,unvaccinated,,,,GENEPIO:0100102,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,not vaccinated,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A vaccination status in which an individual has not completed or initiated a vaccine series authorized and administered according to the regional health institutional guidance.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001929,SOLiD 5500,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI SRA: AB SOLiD 5500,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001929,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SOLiD 5500,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100057,subject age at time of specimen collection bin (80 - 89),,An age group that stratifies the age of a case to be between 80 to 89 years old (inclusive).,FALSE,,,,,,,80 - 89,,,,,,,,,,,,,,,,,,,,,,,,ready for release,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100057,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,subject age at time of specimen collection bin (80 - 89),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An age group that stratifies the age of a case to be between 80 to 89 years old (inclusive).,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001390,host health outcome,host health outcome,A host data field which describes the disease outcome in the host.,FALSE,,,,,,,PCDS:host_health_outcome,,,,,,,"PCDS: If known, select a value from the pick list.",,,,,,,,,,,,,,PCDS: Recovered,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,host health outcome,host health outcome slot,,,,GENEPIO:0001390,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,host health outcome,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A host data field which describes the disease outcome in the host.,,PCDS: Disease outcome in the host.,,,,,,
http://www.ebi.ac.uk/efo/EFO_0002571,medical procedure,interventionDescription|SURGICAL AND MEDICAL PROCEDURES|Procedure|Interventional|Intervention or Procedure|Intervention Strategies|Intervention,"An activity that produces an effect, or that is intended to alter the course of a disease in a patient or population. This is a general term that encompasses the medical, social, behavioral, and environmental acts that can have preventive, therapeutic, or palliative effects.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SNOMEDCT:50731006|NCIt:C79751|NCIt:C25218|ICD10:Z41,,,,,,,,,,,,,,,,,,,,,,,,,interventionDescription|SURGICAL AND MEDICAL PROCEDURES|Procedure|Interventional|Intervention or Procedure|Intervention Strategies|Intervention,,,,efo:EFO_0002571,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,medical procedure,,,,,,,,,,,,,,,,,,,,,,,,,,,,Tomasz Adamusiak|Jie Zheng,,,,"An activity that produces an effect, or that is intended to alter the course of a disease in a patient or population. This is a general term that encompasses the medical, social, behavioral, and environmental acts that can have preventive, therapeutic, or palliative effects.",,,,,,,,
http://purl.obolibrary.org/obo/HP_0410042,Abnormal liver morphology,,"Any structural anomaly of the bile-secreting organ that is important for detoxification, for fat, carbohydrate, and protein metabolism, and for glycogen storage.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Fyler:4447,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0410042,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal liver morphology,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Any structural anomaly of the bile-secreting organ that is important for detoxification, for fat, carbohydrate, and protein metabolism, and for glycogen storage.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000121,beef strip loin (bone-in),,A cut refers to the group of muscles that extends the length of the Top Loin adjacent to the spine bone and on top of the finger bone.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000121,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef strip loin (bone-in),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A cut refers to the group of muscles that extends the length of the Top Loin adjacent to the spine bone and on top of the finger bone.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000217,beef ribeye cap steak,,A steak cut that is portioned from the ribeye cap roll by slicing at a right angle to the grain or muscle fibre direction.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000217,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef ribeye cap steak,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A steak cut that is portioned from the ribeye cap roll by slicing at a right angle to the grain or muscle fibre direction.,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000253,Merina,,A Malagasy population with a population size of > 5 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000253,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Merina,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Malagasy population with a population size of > 5 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000252,Zafimaniry,,A Betsileo population with a population size of 0.015 million,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000252,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Zafimaniry,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Betsileo population with a population size of 0.015 million,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000256,Antandroy,,A Malagasy population with a population size of 0.6 million,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000256,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Antandroy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Malagasy population with a population size of 0.6 million,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000254,Bara,,A Malagasy population with a population size of 0.52 million,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000254,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Bara,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Malagasy population with a population size of 0.52 million,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000258,Cafre,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000258,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Cafre,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000257,Mahafaly,,A Malagasy population with a population size of 0.15 million,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000257,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Mahafaly,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Malagasy population with a population size of 0.15 million,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000250,Antemoro,,A Malagasy population with a population size of 0.5 million,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000250,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Antemoro,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Malagasy population with a population size of 0.5 million,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000251,Betsileo,,A Malagasy population with a population size of 4.359 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000251,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Betsileo,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Malagasy population with a population size of 4.359 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000255,Vezo,,A Malagasy population with a population size of 0.0012 million,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000255,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Vezo,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Malagasy population with a population size of 0.0012 million,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000259,Malbar,,A Eastern African population with a population size of 0.18 million,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000259,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Malbar,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Eastern African population with a population size of 0.18 million,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000049,MLST clonal complex,,"Multilocus sequence typing (MLST) is a technique in molecular biology for the typing of multiple loci. The procedure characterizes isolates of microbial species using the DNA sequences of internal fragments of multiple housekeeping genes. Sequence types are grouped into clonal complexes by their similarity to a central allelic profile (genotype). As such, clonal complexes represent sequence types that share a number of identical alleles e.g. 5/7",FALSE,,,,,,,,,,,,,,,,,,,,,URI: http://en.wikipedia.org/wiki/Multilocus_sequence_typing ; http://eburst.mlst.net/3.asp,,,,,,,pick list?,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000049,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,,,,,,,MLST clonal complex,,,,,Lab Analytic,,,,,,,,,,,,,,,,,,,,,,MLST  Clonal Complex,,,inferred from BCCDC interviews and Bionumerics,,"Multilocus sequence typing (MLST) is a technique in molecular biology for the typing of multiple loci. The procedure characterizes isolates of microbial species using the DNA sequences of internal fragments of multiple housekeeping genes. Sequence types are grouped into clonal complexes by their similarity to a central allelic profile (genotype). As such, clonal complexes represent sequence types that share a number of identical alleles e.g. 5/7",,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_57486,Mus musculus molossinus,,,FALSE,,,,,,,Japanese wild mouse,,,,,,,,,,,,,,,,,,,Mus musculus molossinus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:57486,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Mus musculus molossinus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001748,transcriptome data from specimen,,Transcriptome: transcript and/or expression data.,FALSE,,,,,,,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/books/NBK54364/,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001748,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,transcriptome data from specimen,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,Transcriptome: transcript and/or expression data.,,,,transcriptome,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001818,MESH,,MeSH is the National Library of Medicine's controlled vocabulary thesaurus. It consists of sets of terms naming descriptors in a hierarchical structure that permits searching at various levels of specificity.,FALSE,,,,,,,Medical Subject Headings,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,MSH,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001818,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MESH,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,https://www.nlm.nih.gov/mesh/meshhome.html,,MeSH is the National Library of Medicine's controlled vocabulary thesaurus. It consists of sets of terms naming descriptors in a hierarchical structure that permits searching at various levels of specificity.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0000992,DNA sequencing service,,A DNA sequencing  process provided as a service - which is the realization of some DNA sequencing in which the service provider role is realized.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,Eagle-i will supply better English definition,DNA sequencing service,,,,,http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0000992,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DNA sequencing service,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A DNA sequencing  process provided as a service - which is the realization of some DNA sequencing in which the service provider role is realized.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510179,saturated fat free food,,"A claim that a food does not contain saturated fat, and any claim likely to have the same meaning for the consumer, may only be made where the sum of saturated fat and trans-fatty acids does not exceed 0,1 g of saturated fat per 100 g or 100 ml [REGULATION (EC) No 1924/2006 Corrigendum 2007-01-18].

Food having less than 0.5 grams saturated fat per amount customarily consumed (or for meals and main dishes, less than 0.5 grams saturated fat per labeled serving). Trans fatty acids are not more than 1% of total fat. Such foods contain no ingredient that is understood to contain saturated fat except where the ingredient listed has been footnoted '*adds a trivial amount of saturated fat' [US FDA].",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0179,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510179,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,saturated fat free food,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A claim that a food does not contain saturated fat, and any claim likely to have the same meaning for the consumer, may only be made where the sum of saturated fat and trans-fatty acids does not exceed 0,1 g of saturated fat per 100 g or 100 ml [REGULATION (EC) No 1924/2006 Corrigendum 2007-01-18].

Food having less than 0.5 grams saturated fat per amount customarily consumed (or for meals and main dishes, less than 0.5 grams saturated fat per labeled serving). Trans fatty acids are not more than 1% of total fat. Such foods contain no ingredient that is understood to contain saturated fat except where the ingredient listed has been footnoted '*adds a trivial amount of saturated fat' [US FDA].",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001276,water exposure by source,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001276,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,water exposure by source,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C114947,Postterm Infant,Postterm Infant|Postmature|Post Dates,"An age group comprised of infants greater than or equal to 42 weeks, 0 days gestational age.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Postterm Infant|Postmature|Post Dates,,,,NCIT:C114947,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Postterm Infant,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An age group comprised of infants greater than or equal to 42 weeks, 0 days gestational age.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102045,assay target details,assay target details 3|assay target details 2|assay target details 1,PCDS: Provide details that are applicable to the assay used for the diagnostic test.,FALSE,,,,,,,PCDS:assay_target_details_*,,,,,,,PCDS: Provide details that are applicable to the assay used for the diagnostic test.,,,,,,,,,,,,,,PCDS: Primers bind to the first 200bp of the 5' region of the gene.,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,assay target details 3|assay target details 2|assay target details 1,,,,GENEPIO:0102045,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2026-04-13T17:16:47.336Z,,,,,,,,,,,,,,,,,,,assay target details,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PCDS: Describe any details of the assay target.,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490239,plastic screw cap/pilfer proof,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0239,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490239,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,plastic screw cap/pilfer proof,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_50047,organic amino compound,,"A compound formally derived from ammonia by replacing one, two or three hydrogen atoms by organyl groups.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:50047,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,organic amino compound,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A compound formally derived from ammonia by replacing one, two or three hydrogen atoms by organyl groups.",,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0100233,long COVID-19,sequelae of COVID-19|post-acute sequelae of SARS-CoV-2 infection|post-acute sequelae of COVID-19|long-haul COVID-19|long haul COVID-19|PASC,"A chronic disease triggered by acute COVID-19 infection that is characterized by persistent symptoms following the acute phase of the SARS-CoV-2 infection, which may include fatigue, coughing, dyspnea, clouding of mentation, sleep disturbances, exercise intolerance and autonomic symptoms including tachycardia upon mild exercise or standing, night sweats, temperature dysregulation, gastroparesis, constipation or loose stools, and peripheral vasoconstriction.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C5433293|NCIT:C179263|MedDRA:10085504|MedDRA:10085503|MESH:D000094024|MEDGEN:1735839|DOID:0080848,,,,,,,,,,,,,,,,,,,,,,,,,sequelae of COVID-19|post-acute sequelae of SARS-CoV-2 infection|post-acute sequelae of COVID-19|long-haul COVID-19|long haul COVID-19|PASC,,,,MONDO:0100233,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,,,,,,,,,long COVID-19,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A chronic disease triggered by acute COVID-19 infection that is characterized by persistent symptoms following the acute phase of the SARS-CoV-2 infection, which may include fatigue, coughing, dyspnea, clouding of mentation, sleep disturbances, exercise intolerance and autonomic symptoms including tachycardia upon mild exercise or standing, night sweats, temperature dysregulation, gastroparesis, constipation or loose stools, and peripheral vasoconstriction.",,,,,,,,
http://purl.obolibrary.org/obo/OBI_0002003,Illumina MiSeq,,"A DNA sequencer which is manufactured by the Illumina corporation. Built upon sequencing by synthesis technology, the machine provides an end-to-end solution (cluster generation, amplification, sequencing, and data analysis) in a single machine.",FALSE,,,,,,,MiSeq,,,,,,,,,,,,,,http://res.illumina.com/documents/products/datasheets/datasheet_miseq.pdf,,,,,Illumina MiSeq,,"Rutvisuttinunt W, Chinnawirotpisan P, Simasathien S, Shrestha SK, Yoon IK, Klungthong C, Fernandez S. Simultaneous and complete genome sequencing of influenza A and B with high coverage by Illumina MiSeq Platform. J Virol Methods. 2013 Nov;193(2):394-404. [PMID:23856301]",,,http://purl.obolibrary.org/obo/IAO_0000120,NCBI SRA: Illumina MiSeq,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0002003,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Illumina MiSeq,,,,,,,,,,,,,,,,,,,,,,,,,,,,"PERSON: Venkat Malladi, Chris Stoeckert, Jie Zheng",,,,"A DNA sequencer which is manufactured by the Illumina corporation. Built upon sequencing by synthesis technology, the machine provides an end-to-end solution (cluster generation, amplification, sequencing, and data analysis) in a single machine.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038137,parietal pre-aortic lymph node,parietal preaortic node|parietal pre-aortic node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:16603,,,,,,,,,,,,,,,,,,,,,,,,,parietal preaortic node|parietal pre-aortic node,,,,UBERON:0038137,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,parietal pre-aortic lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038139,retro-aortic lymph node,retroaortic lymph node|retro-aortic node|postaortic lymph node|post-aortic lymph node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:16607,,,,,,,,,,,,,,,,,,,,,,,,,retroaortic lymph node|retro-aortic node|postaortic lymph node|post-aortic lymph node,,,,UBERON:0038139,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,retro-aortic lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/OMRSE_00000026,organism social role,,A role in human social processes that inheres in an organism.,FALSE,,,,,,,,,,,,,,"Previous definition: A role in human social processes played by an organism.|Includes animals as well as humans.  For example, pet, assistance animal, animal grown for food, work animal, domesticated animal, K-9, etc.  Human roles include gender role, party to legal entities, health care provider roles like doctor, nurse, etc.|Defined class that we will ultimately move to an application ontology.  We are leaving here for now until we determine which application ontology: it is likely going to be an ontology that does not currently (2012-06-05) exist.

Ditto for its current descendants.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OMRSE:00000026,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/omrse.owl,,,,,,,,,organism social role,,,,,,,,,,,,,,,,,,,,,,,,,,,,"William R. Hogan
Mathias Brochhausen",,,,A role in human social processes that inheres in an organism.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102269,filename,NCIT:C171191,A data label which is used to uniquely identify a computer file within a file system.,FALSE,,,,,,,file name,,,,,,,,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,NCIT:C171191,,,,,,,,,data filename,,,,GENEPIO:0102269,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788,2026-01-28T20:28:47.344Z,,,,,,,,,,,,,,,,,,,filename,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data label which is used to uniquely identify a computer file within a file system.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100473,sequencing platform,sequencing_platform|sequencing platform,A data field which describes the platform technology used to perform the sequencing.,FALSE,,,,,,,PCDS:sequencing_platform,,,,,,,"PCDS: Provide the name of the company that created the sequencing instrument by selecting a value from the template pick list. If the information is unknown or cannot be provided, leave blank or provide a null value.",,,,,,,,,,,,,,PCDS: Illumina [GENEPIO:0001923],,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,sequencing_platform|sequencing platform,sequencing platform slot,,,,GENEPIO:0100473,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,sequencing platform,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the platform technology used to perform the sequencing.,,PCDS: The platform technology used to perform the sequencing.,,,,,,
http://purl.obolibrary.org/obo/DOID_9988,tertiary neurosyphilis,,A tertiary syphilis that results in infection located in brain or located in spinal cord.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:9988,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,tertiary neurosyphilis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A tertiary syphilis that results in infection located in brain or located in spinal cord.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0101023,available data type details,available data types details,A data field which describes detailed information regarding other available data types.,FALSE,,,,,,,PCDS:available_data_type_details,,,,,,,PCDS: Use this field to provide free text details describing other available data types that may provide context for interpreting genomic sequence data.,,,,,,,,,,,,,,PCDS: Pooled metagenomes containing extended spectrum beta-lactamase (ESBL) bacteria,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,available data types details,available data types details slot,,,,GENEPIO:0101023,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2026-04-13T17:16:47.336Z,,,,,,,,,,,,,,,,,,,available data type details,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes detailed information regarding other available data types.,,PCDS: Detailed information regarding other available data types.,,,,,,
http://purl.obolibrary.org/obo/NCIT_C41277,Tube,Tube,"A hollow cylinder, especially one for holding or conveying liquids; anything shaped like such a hollow cylinder, e.g. an organic structure having the shape or function of a tube such as channel within a plant or animal body (e.g. fallopian tube).",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Tube,,,,NCIT:C41277,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Tube,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"A hollow cylinder, especially one for holding or conveying liquids; anything shaped like such a hollow cylinder, e.g. an organic structure having the shape or function of a tube such as channel within a plant or animal body (e.g. fallopian tube).",,"A hollow cylinder, especially one for holding or conveying liquids.",,,,,,
http://purl.obolibrary.org/obo/UBERON_0037590,lateral axillary lymph node,nodus lymphaticus brachialis axillae|humeral node|brachial axillary node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:14186,,,,,,,,,,,,,,,,,,,,,,,,,nodus lymphaticus brachialis axillae|humeral node|brachial axillary node,,,,UBERON:0037590,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,lateral axillary lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_59772,hemiketal,,"A hemiacetal having the structure RR<small><sup>1</small></sup>C(OH)OR<small><sup>2</small></sup> (R, R<small><sup>1</small></sup>, R<small><sup>2</small></sup> ≠ H), derived from a ketone by formal addition of an alcohol to the carbonyl group.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:59772,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,hemiketal,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A hemiacetal having the structure RR<small><sup>1</small></sup>C(OH)OR<small><sup>2</small></sup> (R, R<small><sup>1</small></sup>, R<small><sup>2</small></sup> ≠ H), derived from a ketone by formal addition of an alcohol to the carbonyl group.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100284,culture collection ID,culture collection,A data field which describes the name of the source collection and unique culture identifier.,FALSE,,,,,,,PCDS:culture_collection,,,,,,,"PCDS: Format: '<institution-code>:[<collection-code>:]<culture_id>'. For more information, see http://www.insdc.org/controlled-vocabulary-culturecollection-qualifier.",,,,,,,,,,,,,,"PCDS: /culture_collection=""ATCC:26370",,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,culture collection,culture collection slot,,,,GENEPIO:0100284,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,culture collection ID,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the name of the source collection and unique culture identifier.,,PCDS: The name of the source collection and unique culture identifier.,,,,,,
http://purl.obolibrary.org/obo/NCIT_C25341,Location,Location,"A position, site, or point in space where something can be found.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Location,,,,NCIT:C25341,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Location,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A position, site, or point in space where something can be found.",,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0579,Jingpo Chinese,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0579,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Jingpo Chinese,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0572,Kosraean,Kosraen,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Kosraen,,,,HANCESTRO:0572,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Kosraean,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0571,Plains Indians,Plains American Indian,Individuals who self-identify or are reported by authors as belonging to the indigenous peoples who have historically lived on the Interior Plains (the Great Plains and Canadian Prairies) of North America,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Plains American Indian,,,,HANCESTRO:0571,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Plains Indians,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Individuals who self-identify or are reported by authors as belonging to the indigenous peoples who have historically lived on the Interior Plains (the Great Plains and Canadian Prairies) of North America,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0574,Pacific Islander,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0574,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Pacific Islander,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0577,Dai,,,FALSE,,,,,,,Dai Chinese,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0577,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Dai,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0573,Native Hawaiian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0573,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Native Hawaiian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0578,Hui,,,FALSE,,,,,,,Hui Chinese,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0578,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Hui,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0570,Akimel O'odham,Pima Indian|Pima|Akimel O'otham,"Individuals who self-identify or are reported by authors as belonging to a group of indigenous Americans living in an area consisting of what is now central and southern Arizona, as well as northwestern Mexico in the states of Sonora and Chihuahua. The majority population of the two current bands of the Akimel O'odham in the United States are based in two reservations: the Keli Akimel Oʼodham on the Gila River Indian Community (GRIC) and the On'k Akimel O'odham on the Salt River Pima-Maricopa Indian Community (SRPMIC).",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Pima Indian|Pima|Akimel O'otham,,,,HANCESTRO:0570,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Akimel O'odham,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Individuals who self-identify or are reported by authors as belonging to a group of indigenous Americans living in an area consisting of what is now central and southern Arizona, as well as northwestern Mexico in the states of Sonora and Chihuahua. The majority population of the two current bands of the Akimel O'odham in the United States are based in two reservations: the Keli Akimel Oʼodham on the Gila River Indian Community (GRIC) and the On'k Akimel O'odham on the Salt River Pima-Maricopa Indian Community (SRPMIC).",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C166114,Biological Parent,Natural Parent|Biological Parent,The male who supplied the sperm or the female who supplied the egg which resulted in one's conception.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Natural Parent|Biological Parent,,,,NCIT:C166114,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Biological Parent,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The male who supplied the sperm or the female who supplied the egg which resulted in one's conception.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C166116,Step Parent,Step Parent,A non-biological parent through current or prior marriage to the subject's biological or legal parent.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Step Parent,,,,NCIT:C166116,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Step Parent,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A non-biological parent through current or prior marriage to the subject's biological or legal parent.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002146,assembly genome size specification,,A specification for the size of an assembled genome as measured in base pairs.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,This is a decimal because the megabasepair unit may involve a fractional component.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002146,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,assembly genome size specification,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0001561,,,,,,,,A specification for the size of an assembled genome as measured in base pairs.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490235,polypropylene plug,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0235,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490235,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,polypropylene plug,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00002831,"populated place, Brazil",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00002831,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Brazil",http://purl.obolibrary.org/obo/GAZ_00002828,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510275,Hopi food claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0275,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510275,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,Hopi food claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0037502,central axillary lymph node,nodus lymphaticus centralis axillae|central node,An axillary lymph node that is imbedded in the adipose tissue near the base of the axilla.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:14189,,,,,,,,,,,,,,,,,,,,,,,,,nodus lymphaticus centralis axillae|central node,,,,UBERON:0037502,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,central axillary lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An axillary lymph node that is imbedded in the adipose tissue near the base of the axilla.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0037500,subscapular axillary lymph node,subcapsular node|posterior axillary node|nodus lymphaticus subscapularis axillae,An axillary lymph node that is placed along the lower margin of the posterior wall of the axilla in the course of the subscapular artery.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:14187,,,,,,,,,,,,,,,,,,,,,,,,,subcapsular node|posterior axillary node|nodus lymphaticus subscapularis axillae,,,,UBERON:0037500,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,subscapular axillary lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An axillary lymph node that is placed along the lower margin of the posterior wall of the axilla in the course of the subscapular artery.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0037503,apical axillary lymph node,nodus lymphaticus apicalis axillae,An axillary lymph node that is situated partly posterior to the upper portion of the Pectoralis minor and partly above the upper border of this muscle.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:14190,,,,,,,,,,,,,,,,,,,,,,,,,nodus lymphaticus apicalis axillae,,,,UBERON:0037503,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,apical axillary lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An axillary lymph node that is situated partly posterior to the upper portion of the Pectoralis minor and partly above the upper border of this muscle.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0037501,pectoral axillary lymph node,pectoral lymph node|nodus lymphaticus pectoralis axillae|anterior axillary lymph node,"An axiallary lymph node along the lower border of the Pectoralis minor, in relation with the lateral thoracic artery. Their afferents drain the skin and muscles of the anterior and lateral thoracic walls, and the central and lateral parts of the mamma; their efferents pass partly to the central and partly to the subclavicular groups of axillary glands.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:14188,,,,,,,,,,,,,,,,,,,,,,,,,pectoral lymph node|nodus lymphaticus pectoralis axillae|anterior axillary lymph node,,,,UBERON:0037501,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,pectoral axillary lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An axiallary lymph node along the lower border of the Pectoralis minor, in relation with the lateral thoracic artery. Their afferents drain the skin and muscles of the anterior and lateral thoracic walls, and the central and lateral parts of the mamma; their efferents pass partly to the central and partly to the subclavicular groups of axillary glands.",,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01001476,body of liquid,,A liquid astronomical body part which is continuous and is delimited by physical discontinuities or non-liquid boundaries.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01001476,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,body of liquid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A liquid astronomical body part which is continuous and is delimited by physical discontinuities or non-liquid boundaries.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000223,beef short rib (raw),,A raw beef short rib cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000223,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef short rib (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef short rib cut.,,,,,,,,
http://purl.obolibrary.org/obo/PATO_0001230,strength,,A quality inhering in a bearer by virtue of the bearer's power or force.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PATO:0001230,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/pato.owl,http://purl.oboInOwllibrary.org/oboInOwl/pato#scalar_slim|http://purl.oboInOwllibrary.org/oboInOwl/pato#attribute_slim,,,,,,,,strength,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A quality inhering in a bearer by virtue of the bearer's power or force.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_22985,calcium molecular entity,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:22985,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,calcium molecular entity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/SO_0001248,assembly,,A region of the genome of known length that is composed by ordering and aligning two or more different regions.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://en.wikipedia.org/wiki/Genome_assembly#Genome_assembly,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SO:0001248,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/so.owl,http://purl.oboInOwllibrary.org/oboInOwl/so#SOFA,,,,,,,,assembly,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A region of the genome of known length that is composed by ordering and aligning two or more different regions.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_554446,cephapirin,,"A cephalosporin with  acetoxymethyl and 2(pyridin-4-ylsulfanyl)acetamido substituents at positions 3 and 7, respectively, of the cephem skeleton. It is used (as its sodium salt) as an antibiotic, being effective against gram-negative and gram-positive organisms.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:3544,,,,,,CHEBI:554446,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,cephapirin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A cephalosporin with  acetoxymethyl and 2(pyridin-4-ylsulfanyl)acetamido substituents at positions 3 and 7, respectively, of the cephem skeleton. It is used (as its sodium salt) as an antibiotic, being effective against gram-negative and gram-positive organisms.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C54197,Non-Sudden Cardiac Death,Non-Sudden Cardiac Death,An expected natural death from a cardiac cause. This condition usually occurs in persons with pre-existing cardiac abnormalities or disease.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Non-Sudden Cardiac Death,,,,NCIT:C54197,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Non-Sudden Cardiac Death,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An expected natural death from a cardiac cause. This condition usually occurs in persons with pre-existing cardiac abnormalities or disease.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000174,forest biome,,A forest ecosystem which is undergoing climactic ecological succession.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SPIRE:Forest|LTER:212,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01000174,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,forest biome,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A forest ecosystem which is undergoing climactic ecological succession.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100065,peripheral cyanosis,,"Bluish discoloration of the distal extremities (hands, fingertips, toes), and can sometimes involve circumoral and periorbital areas. Mucous membranes are generally not involved.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100065,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,peripheral cyanosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Bluish discoloration of the distal extremities (hands, fingertips, toes), and can sometimes involve circumoral and periorbital areas. Mucous membranes are generally not involved.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001269,outbreak animal exposure event location,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001269,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,outbreak animal exposure event location,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020465,piece of turkey meat (skinless),,A piece of skinless turkey meat.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020465,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of turkey meat (skinless),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A piece of skinless turkey meat.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02021385,"veal roast (boneless, seasoned, fresh frozen)",,"A boneless, seasoned and freshly frozen veal roast.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02021385,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"veal roast (boneless, seasoned, fresh frozen)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A boneless, seasoned and freshly frozen veal roast.",,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0017015,primary interstitial lung disease specific to childhood,primary interstitial lung disease specific to childhood|primary ILD specific to childhood,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,icd11.foundation:1408868257|UMLS:C3161253|Orphanet:264665|MEDGEN:853969|GARD:0010559,,,,,,,,,,,,,,,,,,,,,,,,,primary interstitial lung disease specific to childhood|primary ILD specific to childhood,,,,MONDO:0017015,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#rare|http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar|http://purl.oboInOwllibrary.org/oboInOwl/mondo#ordo_group_of_disorders|http://purl.oboInOwllibrary.org/oboInOwl/mondo#gard_rare|http://purl.oboInOwllibrary.org/oboInOwl/mondo#disease_grouping,,,,,,,,primary interstitial lung disease specific to childhood,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_25903,peptide antibiotic,,A chemically diverse class of peptides that exhibit antimicrobial properties.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:25903,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,peptide antibiotic,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A chemically diverse class of peptides that exhibit antimicrobial properties.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0000691,ABI 377 automated sequencer,,is a DNA sequencer which is manufactured by Applied Biosystems corporation (formerly Perkin-Elmer). It allows automated chain termination DNA sequencing. It has part polyacrylamide gel electrophoresis system and a laser -based detection system to detect fluorescence intensity emitted by the dyes attached to the dideoxyterminator nucleotides or to the primers.,FALSE,,,,,,,,,,,,,,,,,,,,,Applied Biosystems,,,,,ABI 377 automated sequencer,,,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0000691,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ABI 377 automated sequencer,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra,,,,is a DNA sequencer which is manufactured by Applied Biosystems corporation (formerly Perkin-Elmer). It allows automated chain termination DNA sequencing. It has part polyacrylamide gel electrophoresis system and a laser -based detection system to detect fluorescence intensity emitted by the dyes attached to the dideoxyterminator nucleotides or to the primers.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03480042,packed in broth,,"A broth which is used as a packing medium for meat, poultry or seafood material where the broth is derived from the packed food material.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=K0042,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03480042,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,packed in broth,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A broth which is used as a packing medium for meat, poultry or seafood material where the broth is derived from the packed food material.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C71393,Foster Relative,Foster Relative|Foster Relation,Unrelated persons who are part of the same foster family.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Foster Relative|Foster Relation,,,,NCIT:C71393,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Foster Relative,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Unrelated persons who are part of the same foster family.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03450025,cooking with added fat or oil,,Cooked by adding fat or oil to those foods that do not contain fat or oil that would render during the cooking process.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=G0025,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03450025,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,cooking with added fat or oil,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Cooked by adding fat or oil to those foods that do not contain fat or oil that would render during the cooking process.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00001992,lamb meat food product,,"Lamb meat food product is a meat product taken from a lamb, a sheep less than a year old.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00001992,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lamb meat food product,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Lamb meat food product is a meat product taken from a lamb, a sheep less than a year old.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000459,buffalo top round,,A buffalo cut that comes from the inside of the rear leg.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000459,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,buffalo top round,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A buffalo cut that comes from the inside of the rear leg.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03601064,cage-free animal claim,,"A label claim that the animals which the food product derives from, were not raised in caged housing systems.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03601064,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,cage-free animal claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A label claim that the animals which the food product derives from, were not raised in caged housing systems.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03601066,grass-fed food product claim,,"A label claim that the animals which the food product derives from, were fed a grass or forage-based diet.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03601066,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,grass-fed food product claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A label claim that the animals which the food product derives from, were fed a grass or forage-based diet.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02021030,buffalo primal cut (raw),,A raw buffalo primal cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02021030,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,buffalo primal cut (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw buffalo primal cut.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C199141,Health Issue Related Group,Health Issue Related Group,Groups that have a focus on health issues.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Health Issue Related Group,,,,NCIT:C199141,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Health Issue Related Group,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Groups that have a focus on health issues.,,,,,,,,
http://www.ebi.ac.uk/efo/EFO_0007058,last follow up,,The date or time of the last check of a patient by a medical professional.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,efo:EFO_0007058,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,last follow up,,,,,,,,,,,,,,,,,,,,,,,,,,,,Catherine Leroy,,,,The date or time of the last check of a patient by a medical professional.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_9471,meningitis,,"A central nervous system disease that is characterized by an inflammation of the pia-arachnoid meninges. It can be caused by growth of bacteria, fungi, or parasites within the subarachnoid space or by the growth of bacteria or viruses within the meningeal or ependymal cells.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:9471,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,meningitis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A central nervous system disease that is characterized by an inflammation of the pia-arachnoid meninges. It can be caused by growth of bacteria, fungi, or parasites within the subarachnoid space or by the growth of bacteria or viruses within the meningeal or ependymal cells.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00002462,shallow frying,,A form of frying characterized by the use of minimal cooking oil or fat (compared to shallow frying or deep frying); typically using just enough oil to lubricate the pan. A pan fry takes place at lower heat than does a sauté.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00002462,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,shallow frying,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A form of frying characterized by the use of minimal cooking oil or fat (compared to shallow frying or deep frying); typically using just enough oil to lubricate the pan. A pan fry takes place at lower heat than does a sauté.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002071,first line tuberculosis drug,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002071,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,first line tuberculosis drug,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490233,plastic stopper,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0233,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490233,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,plastic stopper,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002682,Helicos platform,,A sequencing platform brand provided by Helicos corporation (now defunct).,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002682,,,,,,,,,,,,,,2020-04-24T22:50:49Z,,,,,,,,,,,,,,,,,,,Helicos platform,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://orcid.org/0000-0002-8844-9165,,,,A sequencing platform brand provided by Helicos corporation (now defunct).,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100486,essential worker,,A role inhering in a person that is realized when the bearer is engaged in operations and services that are essential to ensure the continuity of critical infrastructure operations.,FALSE,,,,,,,Essential Worker,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/NCIT_C179411,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100486,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-01-23T00:42:19.315Z,,,,,,,,,,,,,,,,,,,essential worker,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A role inhering in a person that is realized when the bearer is engaged in operations and services that are essential to ensure the continuity of critical infrastructure operations.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100515,AMR testing date,antimicrobial resistance testing date|AMR_testing_date|AMR testing date,A data field which describes the date the antimicrobial resistance (AMR) testing was performed.,FALSE,,,,,,,PCDS:amr_testing_date,,,,,,,"PCDS: Provide the date according to the ISO 8601 standard 'YYYY-MM-DD', 'YYYY-MM' or 'YYYY'.",,,,,,,,,,,,,,PCDS: 2020-06-03,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,antimicrobial resistance testing date|AMR_testing_date|AMR testing date,antimicrobial resistance testing date slot|antimicrobial resistance testing date field|AMR testing date slot,,,,GENEPIO:0100515,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-12-22T00:55:53.808Z,,,,,,,,,,,,,,,,,,,AMR testing date,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the date the antimicrobial resistance (AMR) testing was performed.,,PCDS: The date the antimicrobial resistance testing was performed.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000086,number of expected base pairs per genome,,The estimated size of the genome prior to sequencing. Of particular importance in the sequencing of (eukaryotic) genome which could remain in draft form for a long or unspecified period.,FALSE,,,,,,,,,,,,,,,,,,,,,GROUP: MIxS,,,,,,,300 000,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000086,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,,,,,,,number of expected base pairs per genome,,,,,Sequencing,,,,,,,,,,,,,,,,,,,,,,Number of base pairs,,,inferred from BCCDC interviews,,The estimated size of the genome prior to sequencing. Of particular importance in the sequencing of (eukaryotic) genome which could remain in draft form for a long or unspecified period.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0000702,454 Genome Sequencer FLX,,"is a DNA sequencer which was first manufactured by 454 Life Science Corporation in 2008 and enables pyrosequencing to be performed. It comprises both optics and fluidics subsystems, which are controlled by a computer subsystem. The fluidics subsystem ensures accurate reagent dispensing. It consists of a reagents cassette (which holds the reagent containers), a sipper manifold, pumps, valves, and debubblers. The fluidics subsystem flows the sequencing reagents across the wells of the PicoTiterPlate device, and moves the spent reagents from the PicoTiterPlate device to the waste receptacle. The optics subsystem consists of a CCD camera and a camera controller. The camera captures the light emitted in the wells of the PicoTiterPlate device during each step of the sequencing cycle, and sends the digital images to the computer subsystem for processing. The computer controls the other Sequencer subsystems, and processes the digital images sent by the camera to extract the DNA sequence information.  It has the ability to sequence 400-600 million base pairs per run with 400-500 base pair read lengths.",FALSE,,,,,,,GS-FLX|454 GS FLX,,,,,,,,,,,,,,adapted from https://www.roche-applied-science.com/servlet/RCProductDisplay?langId=-1&storeId=10202&productId=3.8.8.1.1.3&catalogId=10202&krypto=mgV8a0Sdps6%2BCXU8IoddmzNEyGgjde9j8MOFCiMzRsduELeenAlVZ%2FE1QR%2BxLpzNlqMZPLRHqaI%3D&ddkey=https:RCProductDisplay,,,,,454 Genome Sequencer FLX,,"PMID: 18616967. The Genome Sequencer FLX System--longer reads, more applications, straight forward bioinformatics and more complete data sets.  Droege M, Hill B.  J Biotechnol. 2008 Aug 31;136(1-2):3-10.",,,http://purl.obolibrary.org/obo/IAO_0000120,NCBI SRA: 454 GS FLX,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0000702,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,454 Genome Sequencer FLX,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra,,,,"is a DNA sequencer which was first manufactured by 454 Life Science Corporation in 2008 and enables pyrosequencing to be performed. It comprises both optics and fluidics subsystems, which are controlled by a computer subsystem. The fluidics subsystem ensures accurate reagent dispensing. It consists of a reagents cassette (which holds the reagent containers), a sipper manifold, pumps, valves, and debubblers. The fluidics subsystem flows the sequencing reagents across the wells of the PicoTiterPlate device, and moves the spent reagents from the PicoTiterPlate device to the waste receptacle. The optics subsystem consists of a CCD camera and a camera controller. The camera captures the light emitted in the wells of the PicoTiterPlate device during each step of the sequencing cycle, and sends the digital images to the computer subsystem for processing. The computer controls the other Sequencer subsystems, and processes the digital images sent by the camera to extract the DNA sequence information.  It has the ability to sequence 400-600 million base pairs per run with 400-500 base pair read lengths.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C36278,Finding by Site or System,Finding by Site or System,A term that refers to the classification of a clinical or laboratory finding according to the anatomic site or system that is involved.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Finding by Site or System,,,,NCIT:C36278,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Finding by Site or System,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A term that refers to the classification of a clinical or laboratory finding according to the anatomic site or system that is involved.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000009,other (metadata value),,"A data item that indicates for the given categorical variable, a respondent has chosen an other or additional response not listed.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"This class cannot be referred to directly as a subclass of more than one class without involving inference from the respective classes.  Instances of it may exist as a kind of metadata.  Usually a reference to a parent categorical class, but not a subordinate, carries the same information.",,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000009,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,other (metadata value),,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"A data item that indicates for the given categorical variable, a respondent has chosen an other or additional response not listed.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02021001,buffalo material,,Material that derives from some buffalo.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02021001,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,buffalo material,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Material that derives from some buffalo.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000193,beef brisket flat half (boneless),,A boneless beef brisket flat half cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000193,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef brisket flat half (boneless),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A boneless beef brisket flat half cut.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_48,male reproductive system disease,,A reproductive system disease that affects male reproductive organs.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:48,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,male reproductive system disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A reproductive system disease that affects male reproductive organs.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000067,RiboPrinter DUP Number,,DuPont identification number from the DuPont identification library,FALSE,,,,,,,,,,,,,,,,,,,,,NML LIMS,,,,,,,DUP-PST1-1211,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000067,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,,,,,,,RiboPrinter DUP Number,,,,,Lab Analytic,,,,,,,,,,,,,,,,,,,,,,Riboprinter DUP Number,,,NML Labware LIMS,,DuPont identification number from the DuPont identification library,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100996,pooled sample id,pooled sample ID,An identifier field which describes the user-defined identifier assigned to a combined (pooled) set of samples.,FALSE,,,,,,,PCDS:pooled_sample_id,,,,,,,"PCDS: If the sample being analyzed is the result of pooling individual samples, rename the pooled sample with a new identifier. Store the pooled sample ID.",,,,,,,,,,,Drafted 2023-07-27,,,PCDS: 12345AYZ,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,pooled sample ID,pooled sample identifier slot|pooled sample identifier field|pooled sample ID slot,,,,GENEPIO:0100996,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,pooled sample id,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An identifier field which describes the user-defined identifier assigned to a combined (pooled) set of samples.,,PCDS: The user-defined identifier assigned to a combined (pooled) set of samples.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100921,experimental specimen role type,experimental control type,A data field which describes the type of control used in the experiment.,FALSE,,,,,,,PCDS:experimental_specimen_role_type,,,,,,,"PCDS: Samples can play different types of roles in experiments. A sample under study in one experiment may act as a control or be a replicate of another sample in another experiment. This field is used to distinguish samples under study from controls, replicates, etc. If the sample acted as an experimental control or a replicate, select a role type from the picklist. If the sample was not a control, leave blank or select 'Not Applicable'.",,,,,,,,,,,Drafted 2023-07-27,,,PCDS: Positive experimental control,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,experimental control type,experimental control type slot,,,,GENEPIO:0100921,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,experimental specimen role type,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the type of control used in the experiment.,,PCDS: The type of role that the sample represents in the experiment.,,,,,,
http://purl.obolibrary.org/obo/HP_0001945,Fever,Pyrexia|Hyperthermia|Fever,Body temperature elevated above the normal range.,FALSE,,,,,,,,,,,,,,"Fever has been defined as a state of elevated core temperature, which is often, but not necessarily, part of the defensive responses of multicellular organisms (host) to the invasion of live (microorganisms) or inanimate matter recognized as pathogenic or alien by the host. The febrile response (of which fever is a component) is a complex physiologic reaction to disease, involving a cytokine-mediated rise in core temperature, generation of acute phase reactants, and activation of numerous physiologic, endocrinologic, and immunologic systems. The rise in temperature during fever is to be distinguished from that occurring during episodes of hyperthermia. Unlike fever, hyperthermia involves an unregulated rise in body temperature in which pyrogenic cytokines are not directly involved and against which standard antipyretics are ineffective. It represents a failure of thermoregulatory homeostasis, in which there is uncontrolled heat production, inadequate heat dissipation, or defective hypothalamic thermoregulation.",,,,,,,,,,,,,,,,,,UMLS:C0015967|SNOMEDCT_US:50177009|SNOMEDCT_US:386661006,,,,,,,,,,,,,,,,,,,,,,,,,Pyrexia|Hyperthermia|Fever,,,,HP:0001945,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Fever,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Body temperature elevated above the normal range.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0001944,Dehydration,Exsiccosis|Dehydration,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0011175|SNOMEDCT_US:34095006,,,,,,,,,,,,,,,,,,,,,,,,,Exsiccosis|Dehydration,,,,HP:0001944,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Dehydration,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530142,entre-cote,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0142,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530142,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,entre-cote,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03460291,curing or aging 2 to 4 months,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=H0291,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03460291,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,curing or aging 2 to 4 months,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000022,culture frozen date,,A culture frozen date is a date-time entity marking the beginning of a process in which a sample culture is frozen for preservation.,FALSE,,,,,,,,,,,,,,,,,,,,,GROUP: IRIDA Ontology (Emma),,,,,,,year/month/day,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000022,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,,,,,,,culture frozen date,,,,,Collection,,,,,,,,,,,,,,,,,,,,,,Frozen date,Damion Dooley,,NML Labware LIMS,,A culture frozen date is a date-time entity marking the beginning of a process in which a sample culture is frozen for preservation.,,,,,,,,
http://purl.obolibrary.org/obo/OBA_2001032,age of onset of narcolepsy-cataplexy syndrome,age narcolepsy-cataplexy syndrome symptoms begin|age at onset of narcolepsy-cataplexy syndrome,The age at which narcolepsy-cataplexy syndrome manifestations first appear.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,age narcolepsy-cataplexy syndrome symptoms begin|age at onset of narcolepsy-cataplexy syndrome,,,,OBA:2001032,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age of onset of narcolepsy-cataplexy syndrome,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The age at which narcolepsy-cataplexy syndrome manifestations first appear.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001899,phone type - work,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001899,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,phone type - work,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,work,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0314,Sorb,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0314,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Sorb,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0317,Erasmus Rucphen,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0317,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Erasmus Rucphen,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0310,Val Borbera,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0310,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Val Borbera,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0315,Hutterite,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0315,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Hutterite,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0311,Friuli Venezia Giulia,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0311,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Friuli Venezia Giulia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0316,Amish,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0316,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Amish,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0313,Old Order Amish,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0313,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Old Order Amish,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0319,Korčulan,Korculan,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Korculan,,,,HANCESTRO:0319,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Korčulan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0312,Carlantino,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0312,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Carlantino,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0318,Orcadian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0318,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Orcadian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0021100,breast neoplasm,"tumour of the breast|tumour of breast|tumor of the breast|tumor of breast|neoplasm, breast|neoplasm of the breast|neoplasm of breast|breast tumour|breast tumor|breast neoplasm (disease)|breast neoplasm","A benign or malignant neoplasm of the breast parenchyma. It can originate from the ducts, lobules or the breast adipose tissue. Breast neoplasms are much more common in females than males.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C1458155|SCTID:126926005|ONCOTREE:BREAST|NCIT:C2910|MESH:D001943|MEDGEN:264172|ICD9:239.3|EFO:0003869,,,,,,,,,,,,,,,,,,,,,,,,,"tumour of the breast|tumour of breast|tumor of the breast|tumor of breast|neoplasm, breast|neoplasm of the breast|neoplasm of breast|breast tumour|breast tumor|breast neoplasm (disease)|breast neoplasm",,,,MONDO:0021100,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,breast neoplasm,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A benign or malignant neoplasm of the breast parenchyma. It can originate from the ducts, lobules or the breast adipose tissue. Breast neoplasms are much more common in females than males.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002145,date value specification,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/UO_0000003,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002145,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,date value specification,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C36291,Finding by Cause,Finding by Cause,A term that refers to the classification of a clinical or laboratory finding according to the underlying factors.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Finding by Cause,,,,NCIT:C36291,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Finding by Cause,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A term that refers to the classification of a clinical or laboratory finding according to the underlying factors.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001118,travel outside Canada,,A travel destination which a given human has travelled to on a particular trip and is outside Canada.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001118,,,,,,,,,,,,,,2021-05-27T04:35:17Z,,,,,,,,,,,,,,,,,,,travel outside Canada,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788,,,,A travel destination which a given human has travelled to on a particular trip and is outside Canada.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100444,food product,animal_or_plant_population|animal or plant population,A data field which describes material consumed and digested for nutritional value or enjoyment.,FALSE,,,,,,,PCDS:food_product,,,,,,,"PCDS: This field includes animal feed. If applicable, select the standardized term and ontology ID for the anatomical material from the picklist provided. Multiple values can be provided, separated by a semi-colon.",,,,,,,,,,,,,,PCDS: Chicken breast [FOODON:00002703],,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,animal_or_plant_population|animal or plant population,animal or plant population slot,,,,GENEPIO:0100444,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,food product,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes material consumed and digested for nutritional value or enjoyment.,,PCDS: A material consumed and digested for nutritional value or enjoyment.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001480,fast5 filename,fast5_filename|fast5 filename,A data field which describes the user-specified filename of the FAST5 file.,FALSE,,,,,,,PCDS:fast5_filename,,,,,,,PCDS: Provide the FAST5 filename.,,,,,,,,,,,,,,PCDS: mvs123seq.fast5,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,fast5_filename|fast5 filename,fast5 filename slot,,,,GENEPIO:0001480,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,fast5 filename,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the user-specified filename of the FAST5 file.,,PCDS: The user-specified filename of the FAST5 file.,,,,,,
http://purl.obolibrary.org/obo/FOODON_02021383,veal roast (boneless),,A boneless veal roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02021383,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,veal roast (boneless),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A boneless veal roast.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_02000001,textile,,A textile is a manufactured product comprised of a network of natural or artificial fibers (often referred to as thread or yarn).,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Textile,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:02000001,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,textile,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A textile is a manufactured product comprised of a network of natural or artificial fibers (often referred to as thread or yarn).,,,,,,,,
http://purl.obolibrary.org/obo/DOID_11963,esophagitis,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:11963,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,esophagitis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0002791,face shield,,"A personal protective device used to protect the wearer's entire face (or part of it) from hazards such as flying objects and road debris, chemical splashes, or alternately potentially infectious materials.",FALSE,,,,,,,splash shield|faceshield,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Face_shield,,,,,face shield,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0002791,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,face shield,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://orcid.org/0000-0002-8844-9165,,,https://github.com/obi-ontology/obi/issues/1193,"A personal protective device used to protect the wearer's entire face (or part of it) from hazards such as flying objects and road debris, chemical splashes, or alternately potentially infectious materials.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_365,bladder disease,,A urinary system disease that is located_in the bladder.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:365,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,bladder disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A urinary system disease that is located_in the bladder.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_10314,endocarditis,,A endocardium disease characterized by inflammation of the endocardium of the heart chambers and valves.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:10314,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,endocarditis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A endocardium disease characterized by inflammation of the endocardium of the heart chambers and valves.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002104,contact specification - professional role,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002104,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,contact specification - professional role,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"order:
NCIT:C40974 # first name
NCIT:C40975 # last name
NCIT:C93582 # job title
NCIT:C42775 # email address
GENEPIO:0001756 # phone",,,,,
http://purl.obolibrary.org/obo/FOODON_02000209,beef ribeye steak,,A beef steak that is a cut from the rib-eye roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000209,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef ribeye steak,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A beef steak that is a cut from the rib-eye roast.,,,,,,,,
http://purl.obolibrary.org/obo/EO_0007286,EO_0007286,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,EO:0007286,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/EO_0007285,EO_0007285,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,EO:0007285,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HP_0033842,Early satiety,Not able to finish a normal-sized meal|Feeling full quickly when eating,"The condition of being unable to eat a full meal because of a feeling of fullness (satiety), or or feeling very full after eating only a small amount of food.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Not able to finish a normal-sized meal|Feeling full quickly when eating,,,,HP:0033842,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Early satiety,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The condition of being unable to eat a full meal because of a feeling of fullness (satiety), or or feeling very full after eating only a small amount of food.",,,,,,,,
http://purl.obolibrary.org/obo/HP_0033843,Postprandial fullness,,Feeling excessively full after meals.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0033843,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Postprandial fullness,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Feeling excessively full after meals.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01001244,cropland ecosystem,,"An ecosystem which 1) is determined by communities of annual crops, perennial woody crops, or by actively tilled land, 2) is primarily used for agricultural activity, and 3) contains no village or larger human settlement.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01001244,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,cropland ecosystem,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An ecosystem which 1) is determined by communities of annual crops, perennial woody crops, or by actively tilled land, 2) is primarily used for agricultural activity, and 3) contains no village or larger human settlement.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0004765,skeletal element,,"Organ consisting of skeletal tissue. Encompasses whole bones, fused bones, cartilaginious elements, teeth, dermal denticles.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:SkeletalStructure|ZFA:0005494|XAO:0004012|VSAO:0000128|TAO:0001890|AAO:0011129,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0004765,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,skeletal element,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Organ consisting of skeletal tissue. Encompasses whole bones, fused bones, cartilaginious elements, teeth, dermal denticles.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0004766,cranial bone,cranium bone,A bone that is part of a cranium.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SCTID:181792001,,,,,,,,,,,,,,,,,,,,,,,,,cranium bone,,,,UBERON:0004766,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,cranial bone,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A bone that is part of a cranium.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0007023,adult organism,adult,A multicellular organism that existence_ends_with a post-juvenile adult stage and existence_starts_with a post-juvenile adult stage.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://neurolex.org/wiki/Category:Adult_organism|galen:Adult|UMLS:C0001675|TAO:0002046|NCIT:C17600|HAO:0000087|FBbt:00003004|BILA:0000078,,,,,,,,,,,,,,,,,,,,,,,,adult,adults,,,,UBERON:0007023,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,adult organism,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A multicellular organism that existence_ends_with a post-juvenile adult stage and existence_starts_with a post-juvenile adult stage.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_100147,nalidixic acid,,"A monocarboxylic acid comprising 1,8-naphthyridin-4-one substituted by carboxylic acid, ethyl and methyl groups at positions 3, 1, and 7, respectively. An orally administered antibacterial, it is used in the treatment of lower urinary-tract infections due to Gram-negative bacteria, including the majority of <em>E. coli</em>, <em>Enterobacter</em>, <em>Klebsiella</em>, and <em>Proteus</em> species.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:7456,,,,,,CHEBI:100147,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,nalidixic acid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A monocarboxylic acid comprising 1,8-naphthyridin-4-one substituted by carboxylic acid, ethyl and methyl groups at positions 3, 1, and 7, respectively. An orally administered antibacterial, it is used in the treatment of lower urinary-tract infections due to Gram-negative bacteria, including the majority of <em>E. coli</em>, <em>Enterobacter</em>, <em>Klebsiella</em>, and <em>Proteus</em> species.",,,,,,,,
http://purl.obolibrary.org/obo/OBA_2001019,age of onset of bipolar disorder,age bipolar disorder symptoms begin|age at onset of bipolar disorder,The age at which bipolar disorder manifestations first appear.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,age bipolar disorder symptoms begin|age at onset of bipolar disorder,,,,OBA:2001019,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age of onset of bipolar disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The age at which bipolar disorder manifestations first appear.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001553,exposure to individual with diarrhea,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001553,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,exposure to individual with diarrhea,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000129,beef strip steak (bone-in),,A beef strip steak that contains bone material.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000129,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef strip steak (bone-in),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A beef strip steak that contains bone material.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470137,food brining,,Immersed in a salt brine strong enough to suppress enzyme activity and growth of undesirable organisms.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0137,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470137,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food brining,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Immersed in a salt brine strong enough to suppress enzyme activity and growth of undesirable organisms.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020543,"piece of turkey breast (skinless, boneless)",,A piece of skinless and boneless turkey breast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020543,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"piece of turkey breast (skinless, boneless)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A piece of skinless and boneless turkey breast.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490387,diciandiamide-formaldehyde container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0387,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490387,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,diciandiamide-formaldehyde container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001959,RT-PCR method,,Source material was selected by reverse transcription PCR,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI SRA: RT-PCR,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001959,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,RT-PCR method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Source material was selected by reverse transcription PCR,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C53529,Non-Neoplastic Disorder,"Non-neoplastic disorder, NOS|Non-neoplastic condition, NOS|Non-neoplastic Disorder|Non-Neoplastic Disorder|Non-Neoplastic Disease|NON-NEOPLASTIC",Any disorder other than abnormal tissue growth resulting from uncontrolled cell proliferation.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Non-neoplastic disorder, NOS|Non-neoplastic condition, NOS|Non-neoplastic Disorder|Non-Neoplastic Disorder|Non-Neoplastic Disease|NON-NEOPLASTIC",,,,NCIT:C53529,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Non-Neoplastic Disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any disorder other than abnormal tissue growth resulting from uncontrolled cell proliferation.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490347,metalized paper wrapper,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0347,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490347,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,metalized paper wrapper,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100073,pseudo-chilblains on toes,covid toes,Inflammatory chilblain-like nodules on the feet and/or toes.,FALSE,,,,,,,Pseudo-chilblains on toes (covid toes),,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,covid toes,,,,GENEPIO:0100073,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,pseudo-chilblains on toes,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Inflammatory chilblain-like nodules on the feet and/or toes.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100906,total daily flow rate measurement unit,total daily flow rate measurement unit,An environmental data field which describes the units of a measured fluid flow rate over the course of a day.,FALSE,,,,,,,PCDS:total_daily_flow_rate_measurement_unit,,,,,,,PCDS: Provide the units of the measured flow rate by selecting a value from the pick list.,,,,,,,,,,,,,,PCDS: million gallons per day (MGD),,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,total daily flow rate measurement unit,total daily flow rate measurement unit slot,,,,GENEPIO:0100906,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,total daily flow rate measurement unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the units of a measured fluid flow rate over the course of a day.,,PCDS: The units of a measured fluid flow rate over the course of a day.,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490350,metalized paper laminated with treated paper,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0350,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490350,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,metalized paper laminated with treated paper,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001222,patient as host datum,,A host datum is a datum that pertains to infection-related information about an organism (animal or human) who is likely bearing a pathogen,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001222,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IDO_0000531,,,,,,patient as host datum,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A host datum is a datum that pertains to infection-related information about an organism (animal or human) who is likely bearing a pathogen,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_71962,lividomycin B,,A member of the class of lividomycins that is paromomycin in which the 2-amino-2-deoxyglucopyranosyl moiety is lacking the hydroxy group at position 3.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:71962,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,lividomycin B,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A member of the class of lividomycins that is paromomycin in which the 2-amino-2-deoxyglucopyranosyl moiety is lacking the hydroxy group at position 3.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02021241,lamb retail cut,,"A lamb meat cut that is derived from a sub-primal, individual muscle cut or minor primal cut.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02021241,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lamb retail cut,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A lamb meat cut that is derived from a sub-primal, individual muscle cut or minor primal cut.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100616,food packaging date,food_packaging_date|food packaging date,A data field which descibes the food product's packaging date as marked by a food manufacturer or retailer.,FALSE,,,,,,,PCDS:food_packaging_date,,,,,,,"PCDS: The packaging date should not be confused with, nor replaced by a Best Before date or other food quality date. If the date is known, leave blank or provide a null value. Provide the date in ISO 8601 format, i.e. 'YYYY-MM-DD'.",,,,,,,,,,,,,,PCDS: 2020-05-25,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,food_packaging_date|food packaging date,food packaging date slot,,,,GENEPIO:0100616,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,food packaging date,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which descibes the food product's packaging date as marked by a food manufacturer or retailer.,,PCDS: A food product's packaging date as marked by a food manufacturer or retailer.,,,,,,
http://purl.obolibrary.org/obo/MONDO_0005833,lymphatic system disorder,lymphangiopathy|lymphadenopathy,A disease involving the lymphatic part of lymphoid system.,FALSE,,,,,,,,,,,,,,"Editor note: check alignment to anatomy, consider lymphoid system disease",,,,,,,,,,,,,,,,,,UMLS:C4021976|SCTID:362971004|NCIT:C50764|MESH:D008206|MEDGEN:892707|EFO:0007352|DOID:75,,,,,,,,,,,,,,,,,,,,,,,,,"swollen glands|swollen gland|lymphatic part of lymphoid system disease or disorder|lymphatic part of lymphoid system disease|lymphatic disease|glands, swollen|disorder of lymphatic part of lymphoid system|disease or disorder of lymphatic part of lymphoid system|disease of lymphatic part of lymphoid system",lymphangiopathy|lymphadenopathy,,,MONDO:0005833,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,lymphatic system disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A disease involving the lymphatic part of lymphoid system.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490404,polyethylene (low density) - polypropylene container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0404,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490404,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,polyethylene (low density) - polypropylene container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002750,animal rinse,,Animal rinse is a rinse derived from animal material of one or more animals.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002750,,,,,,,,,,,,,,2019-06-28T20:11:45Z,,,,,,,,,,,,,,,,,,,animal rinse,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,Animal rinse is a rinse derived from animal material of one or more animals.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530008,"cut of meat, u.s.",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0008,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530008,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"cut of meat, u.s.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02021649,pig material,,Material that derives from some pig.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02021649,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pig material,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Material that derives from some pig.,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000535,Bariba,,A Gurma population with a population size of 1.4 million,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000535,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Bariba|Bariba,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Gurma population with a population size of 1.4 million,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000537,Lilse,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000537,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Lilse|Lilse,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000538,Lobi,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000538,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Lobi|Lobi,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000532,Ekoi,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000532,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Ekoi|Ekoi,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000539,Pana,,A Gurma population with a population size of 19700,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000539,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Pana|Pana,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Gurma population with a population size of 19700,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000536,Konkomba,,A Gurma population with a population size of 950000,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000536,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Konkomba|Konkomba,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Gurma population with a population size of 950000,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000530,Diffa Arabs,,A Western African population with a population size of 150000,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000530,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Diffa Arabs|Diffa Arabs,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Western African population with a population size of 150000,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000533,Gola,,A Western African population with a population size of 304000,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000533,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Gola|Gola,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Western African population with a population size of 304000,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000534,Guan,,The Guan are a Western African population with a population size of 1 million.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000534,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Guan|Guan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The Guan are a Western African population with a population size of 1 million.,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000531,Ditammari,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000531,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Ditammari|Ditammari,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490265,"ceramic or earthenware bottle, uncoloured",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0265,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490265,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"ceramic or earthenware bottle, uncoloured",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C82466,Death by Undetermined Cause,Unknown Cause of Death|Death by Undetermined Cause|Death Due to Indeterminate Cause|DIED - UNDETERMINED,Death resulting from an unknown cause.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Unknown Cause of Death|Death by Undetermined Cause|Death Due to Indeterminate Cause|DIED - UNDETERMINED,,,,NCIT:C82466,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Death by Undetermined Cause,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Death resulting from an unknown cause.,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0005570,hematologic disorder,rare hematologic disease|hematopoietic system disease or disorder|hematopoietic system disease|hematopoietic disease|hematological system disease|hematological disorder|hematological disease|hematologic disorder|hematologic and lymphocytic disorder|haematopoietic system disease or disorder|haematopoietic disease|haematological system disease|haematological disorder|haematological disease|disorder of hematopoietic system|disorder of haematopoietic system|disease or disorder of hematopoietic system|disease or disorder of haematopoietic system|disease of the blood and blood-forming organs|disease of hematopoietic system|blood disorder|blood disease,A disease involving the hematopoietic system.,FALSE,,,,,,,,,,,,,,placeholder for lymphoid disease,,,,,,,,,,,,,,,,,,UMLS:C0018939|SCTID:414022008|Orphanet:97992|NCIT:C26323|NANDO:2100175|NANDO:1100006|MESH:D006402|MEDGEN:5483|ICD9:289.9|ICD9:289.8|ICD9:280-289|ICD10CM:D50-D89|GTR:AN1320635|EFO:0005803|DOID:74,,,,,,,,,,,,,,,,,,,,,,,,,rare hematologic disease|hematopoietic system disease or disorder|hematopoietic system disease|hematopoietic disease|hematological system disease|hematological disorder|hematological disease|hematologic disorder|hematologic and lymphocytic disorder|haematopoietic system disease or disorder|haematopoietic disease|haematological system disease|haematological disorder|haematological disease|disorder of hematopoietic system|disorder of haematopoietic system|disease or disorder of hematopoietic system|disease or disorder of haematopoietic system|disease of the blood and blood-forming organs|disease of hematopoietic system|blood disorder|blood disease,,,,MONDO:0005570,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#rare_grouping|http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar|http://purl.oboInOwllibrary.org/oboInOwl/mondo#ordo_group_of_disorders|http://purl.oboInOwllibrary.org/oboInOwl/mondo#harrisons_view|http://purl.oboInOwllibrary.org/oboInOwl/mondo#disease_grouping,,,,,,,,hematologic disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A disease involving the hematopoietic system.,,,,,,,,
http://purl.obolibrary.org/obo/CL_0000010,cultured cell,,A cell in vitro that is or has been maintained or propagated as part of a cell culture.,FALSE,,,,,,,,,,,,,,"Note that this class was re-labeled to 'cultured cell' instead of 'cell line cell', as it intent was clarified to cover any cultured cells of multicellular and unicellular organisms. This includes cells actively being cultured, or cells that have been cultured but are stored in a quiescent state for future use. In having been cultured, cells must establish homeostasis and often replicate in a foreign environment. Accomodation of this stress initiates a selection of cells fit for such challenges, wherein necessary adaptive biochemical and.or genetic changes can occur. These changes can set them apart from the in vivo cells from which they derive, and such changes will typically accumulate and change over increasing time in culture.",,,,,,,,,,,,cultured cell,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CL:0000010,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/clo.owl,,,,,,,,,cultured cell,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A cell in vitro that is or has been maintained or propagated as part of a cell culture.,,,,,,,,
http://purl.obolibrary.org/obo/OBA_2050353,age of onset of pancreatic ductal adenocarcinoma,age pancreatic ductal adenocarcinoma symptoms begin|age at onset of pancreatic ductal adenocarcinoma,The age at which pancreatic ductal adenocarcinoma manifestations first appear.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,age pancreatic ductal adenocarcinoma symptoms begin|age at onset of pancreatic ductal adenocarcinoma,,,,OBA:2050353,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age of onset of pancreatic ductal adenocarcinoma,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The age at which pancreatic ductal adenocarcinoma manifestations first appear.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03311140,chicken breast (cooked),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://bioregistry.io/reference/siren:F11140,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03311140,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,chicken breast (cooked),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001487,exposure event end,,"A date-time datum that marks the end of possible human or animal exposure to a pathogen agent, directly or indirectly.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001487,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,exposure event end,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"A date-time datum that marks the end of possible human or animal exposure to a pathogen agent, directly or indirectly.",,,,,,,,
http://purl.obolibrary.org/obo/IAO_0000030,information content entity,information content entity,"An information entity is an entity that represents information about some other entity.  For example, a measurement, a clustered data set.|A generically dependent continuant that is about some thing.",FALSE,,,,,,,,,,,,,,,,,,,,,OBI_0000142,,,,"information_content_entity 'is_encoded_in' some digital_entity in obi before split (040907). information_content_entity 'is_encoded_in' some physical_document in obi before split (040907).

Previous. An information content entity is a non-realizable information entity that 'is encoded in' some digital or physical entity.|2014-03-10: The use of ""thing"" is intended to be general enough to include universals and configurations (see https://groups.google.com/d/msg/information-ontology/GBxvYZCk1oc/-L6B5fSBBTQJ).",information content entity,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,information content entity,,,,IAO:0000030,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl|http://purl.obolibrary.org/obo/t4fs.owl|http://purl.obolibrary.org/obo/stato.owl|http://purl.obolibrary.org/obo/pco.owl|http://purl.obolibrary.org/obo/obib.owl|http://purl.obolibrary.org/obo/mondo.owl|http://purl.obolibrary.org/obo/iao.owl|http://purl.obolibrary.org/obo/hso.owl|http://purl.obolibrary.org/obo/foodon.owl|http://purl.obolibrary.org/obo/cob.owl|http://purl.obolibrary.org/obo/apollo_sv.owl,,,,,,,,,information entity|information|information content entity,,,,,,,,,,,,,,,,,,,,,,,,,,,,PERSON: Chris Stoeckert|James Malone,,,,"An information entity is an entity that represents information about some other entity.  For example, a measurement, a clustered data set.|A generically dependent continuant that is about some thing.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001170,organism datum,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001170,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/COB_0000022,,,,,,organism datum,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/PATO_0000047|http://purl.obolibrary.org/obo/OBI_0100026|http://purl.obolibrary.org/obo/GENEPIO_0001171|http://www.ebi.ac.uk/efo/EFO_0004324|http://purl.obolibrary.org/obo/NCIT_C25190|http://purl.obolibrary.org/obo/NCIT_C124295|http://purl.obolibrary.org/obo/GENEPIO_0002131|http://purl.obolibrary.org/obo/GENEPIO_0002130|http://purl.obolibrary.org/obo/GENEPIO_0002008|http://purl.obolibrary.org/obo/GENEPIO_0001640|http://purl.obolibrary.org/obo/GENEPIO_0001183|http://purl.obolibrary.org/obo/GENEPIO_0000114,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000450,irrigation reservoir,irrigation pond,A reservoir constructed for the purpose of providing water for irrigation.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,irrigation pond,,,,ENVO:00000450,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,irrigation reservoir,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A reservoir constructed for the purpose of providing water for irrigation.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020429,piece of turkey (raw),,A raw piece of turkey.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020429,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of turkey (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw piece of turkey.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C171256,Non-Medical Object or Device,Non-Medical Object or Device,A manufactured object designed for non-medical use.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Non-Medical Object or Device,,,,NCIT:C171256,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Non-Medical Object or Device,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A manufactured object designed for non-medical use.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0000366,Abnormality of the nose,Nasal malformation|Nasal deformity|Malformation of the nose|Deformity of the nose,An abnormality of the nose.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C2235909|UMLS:C0265736|UMLS:C0240547|SNOMEDCT_US:72089000|SNOMEDCT_US:128274005,,,,,,,,,,,,,,,,,,,,,,,,,Nasal anomaly|Nasal abnormality|Anomaly of the nose|Abnormality of the nose,Nasal malformation|Nasal deformity|Malformation of the nose|Deformity of the nose,,,HP:0000366,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,http://purl.oboInOwllibrary.org/oboInOwl/hp#hposlim_core,,,,,,,,Abnormality of the nose,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An abnormality of the nose.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02010185,piece of animal breast (skinless),,A piece of skinless animal breast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02010185,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of animal breast (skinless),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A piece of skinless animal breast.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0015918,deep lymph node,,"A lymph node that is located deeper within the organism, further from the surface.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:12768,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0015918,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,deep lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A lymph node that is located deeper within the organism, further from the surface.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0015917,superficial lymph node,,A lymph node that is located close to the surface.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCIT:C102716|FMA:12767,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0015917,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,superficial lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A lymph node that is located close to the surface.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000111,beef chuck arm roast,,A roast cut from the arm bone (humerus) of the upper forelimb.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000111,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef chuck arm roast,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A roast cut from the arm bone (humerus) of the upper forelimb.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00003955,Turks and Caicos Islands,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,INSDC:country:turks and caicos islands,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00003955,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Turks and Caicos Islands,http://purl.obolibrary.org/obo/GAZ_00003954,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00003959,United States Virgin Islands,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00003959,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,United States Virgin Islands,http://purl.obolibrary.org/obo/GAZ_00003960,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00003956,Unincorporated Territory (USA),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00003956,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Unincorporated Territory (USA),http://purl.obolibrary.org/obo/GAZ_00002459,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00003957,American Samoa,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,INSDC:country:american samoa,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00003957,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,American Samoa,http://purl.obolibrary.org/obo/GAZ_00006911,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100605,accession number,,A unique identifier given to a sequence record to allow for tracking of different versions of that sequence record and the associated sequence over time in a single data repository.,FALSE,,,,,,,accession identifier,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Accession_number_(bioinformatics),,,,,accession number,,A sequence Accession number without a version suffix always refers to the latest version of the sequence.,,,ready for release,http://purl.obolibrary.org/obo/OBI_0003500,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100605,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,accession number,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135,,,https://github.com/obi-ontology/obi/issues/1579,A unique identifier given to a sequence record to allow for tracking of different versions of that sequence record and the associated sequence over time in a single data repository.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00005399,lamb loin roast,,A lamb roast derived from the Loin.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00005399,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lamb loin roast,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A lamb roast derived from the Loin.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_14566,disease of cellular proliferation,,A disease that is characterized by abnormally rapid cell division.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:14566,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,disease of cellular proliferation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A disease that is characterized by abnormally rapid cell division.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001682,host illness associated with,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001682,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,host illness associated with,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001655,obsolete: categorical tree specification,,A categorical tree specification datum is a categorical value specification which takes its value from the ontology URI identifier of any one of its subclass items; these may be organized in a hierarchy.,TRUE,,,,,,,,,,,,,,A categorical tree specification datum may have its own URI identifier as its value. This could be interpreted to mean that the datum was recorded but that no particular categorical subclass distinction was observed. This in effect makes the datum act as a boolean variable.,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001655,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: categorical tree specification,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,http://purl.obolibrary.org/obo/OBI_0001930,,,A categorical tree specification datum is a categorical value specification which takes its value from the ontology URI identifier of any one of its subclass items; these may be organized in a hierarchy.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102278,prior antiviral treatment date,,A prior infection data field which describes the date treatment was first administered during a prior pathogen infection.,FALSE,,,,,,,PCDS:prior_antiviral_treatment_date,,,,,,,PCDS: Provide the date that the antiviral treatment agent was first administered during the most recenrt prior infection. Provide the prior pathogen treatment date in ISO 8601 standard format 'YYYY-MM-DD'.,,,,,,,,,,,,,,PCDS: 2021-01-23,,,uncurated,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102278,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2026-04-09T18:02:29.914Z,,,,,,,,,,,,,,,,,,,prior antiviral treatment date,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A prior infection data field which describes the date treatment was first administered during a prior pathogen infection.,,PCDS: The date treatment was first administered during the prior pathogen infection.,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490143,"glass container, tin-plated steel lid",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0143,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490143,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"glass container, tin-plated steel lid",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001238,symbiotic role,,Organism has a symbiotic relationship with host,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001238,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,symbiotic role,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Organism has a symbiotic relationship with host,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_33257,secondary amide,,A derivative of two oxoacids R<small><sub><em>k</em></sub></small>E(=O)<small><sub><em>l</em></sub></small>(OH)<small><sub><em>m</em></sub></small> (<em>l</em> ≠ 0) in which two acyl groups are attached to the amino or substituted amino group.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:33257,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,secondary amide,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A derivative of two oxoacids R<small><sub><em>k</em></sub></small>E(=O)<small><sub><em>l</em></sub></small>(OH)<small><sub><em>m</em></sub></small> (<em>l</em> ≠ 0) in which two acyl groups are attached to the amino or substituted amino group.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000047,secondary enzyme (LMACI),,Restriction enzyme for second characterization,FALSE,,,,,,,,,,,,,,,,,,,,,GROUP: IRIDA Ontology (Emma),,,,,,,"pick list (XbaI, BlnI)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000047,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,,,,,,,secondary enzyme (LMACI),,,,,Lab Analytic,,,,,,,,,,,,,,,,,,,,,,Host Secondary Enzyme,,,PulseNet Data Capture,,Restriction enzyme for second characterization,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0003134,female reproductive organ,sex organ of female organism|reproductive system organ of female organism|reproductive structure of female organism|reproductive organ of female organism|female sex organ|female reproductive system organ|female reproductive gland/organ|female organism sex organ|female organism reproductive system organ|female organism reproductive structure|female organism reproductive organ,A female organ involved in reproduction.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MA:0000544|EMAPA:28540,,,,,,,,,,,,,,,,,,,,,,,,,sex organ of female organism|reproductive system organ of female organism|reproductive structure of female organism|reproductive organ of female organism|female sex organ|female reproductive system organ|female reproductive gland/organ|female organism sex organ|female organism reproductive system organ|female organism reproductive structure|female organism reproductive organ,,,,UBERON:0003134,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,female reproductive organ,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A female organ involved in reproduction.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0003133,reproductive organ,sex organ|reproductive system organ|genital organ,An organ involved in reproduction.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WBbt:0008422|UMLS:C0017420|TGMA:0000591|SCTID:128181006|NCIT:C25177|MESH:D005835|MA:0001752|EMAPA:37731,,,,,,,,,,,,,,,,,,,,,,,,,sex organ|reproductive system organ|genital organ,,,,UBERON:0003133,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,reproductive organ,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An organ involved in reproduction.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0003135,male reproductive organ,sex organ of male organism|reproductive system organ of male organism|reproductive structure of male organism|reproductive organ of male organism|male sex organ|male reproductive system organ|male reproductive gland/organ|male organism sex organ|male organism reproductive system organ|male organism reproductive structure|male organism reproductive organ,A male organ involved in reproduction.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WBbt:0008423|MA:0000545,,,,,,,,,,,,,,,,,,,,,,,,,sex organ of male organism|reproductive system organ of male organism|reproductive structure of male organism|reproductive organ of male organism|male sex organ|male reproductive system organ|male reproductive gland/organ|male organism sex organ|male organism reproductive system organ|male organism reproductive structure|male organism reproductive organ,,,,UBERON:0003135,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,male reproductive organ,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A male organ involved in reproduction.,,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000014,spherical coordinate system,,"In mathematics, a spherical coordinate system is a coordinate system for three-dimensional space where the position of a point is specified by three numbers: the radial distance of that point from a fixed origin, its polar angle measured from a fixed zenith direction, and the azimuth angle of its orthogonal projection on a reference plane that passes through the origin and is orthogonal to the zenith, measured from a fixed reference direction on that plane.",FALSE,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Spherical_coordinate_system,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000226,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000014,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,spherical coordinate system,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra|Orlaith Burke|Alejandra Gonzalez-Beltran,,,,"In mathematics, a spherical coordinate system is a coordinate system for three-dimensional space where the position of a point is specified by three numbers: the radial distance of that point from a fixed origin, its polar angle measured from a fixed zenith direction, and the azimuth angle of its orthogonal projection on a reference plane that passes through the origin and is orthogonal to the zenith, measured from a fixed reference direction on that plane.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470138,preservation by irradiation,,Preservation by the use of radiation to destroy or suppress undesirable microorganisms or enzyme activity.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0138,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470138,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,preservation by irradiation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Preservation by the use of radiation to destroy or suppress undesirable microorganisms or enzyme activity.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_11405,diphtheria,,"A primary bacterial infectious disease that is characterized by sore throat, low fever, and an adherent membrane (a pseudomembrane) on the tonsils, pharynx, and/or nasal cavity. A milder form of diphtheria can be restricted to the skin. It is caused by Corynebacterium diphtheriae, an aerobic Gram-positive bacterium. Diphtheria toxin spreads through the bloodstream and can lead to potentially life-threatening complications that affect other organs of the body, such as the heart and kidneys.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:11405,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,diphtheria,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A primary bacterial infectious disease that is characterized by sore throat, low fever, and an adherent membrane (a pseudomembrane) on the tonsils, pharynx, and/or nasal cavity. A milder form of diphtheria can be restricted to the skin. It is caused by Corynebacterium diphtheriae, an aerobic Gram-positive bacterium. Diphtheria toxin spreads through the bloodstream and can lead to potentially life-threatening complications that affect other organs of the body, such as the heart and kidneys.",,,,,,,,
http://purl.obolibrary.org/obo/ARO_3004397,broth dilution method,,The microbial species are inoculated in liquid growth medium containing incremental dilutions (usually 2-fold) of the antimicrobial agent.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ARO:3004397,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/aro.owl,,,,,,,,,broth dilution method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The microbial species are inoculated in liquid growth medium containing incremental dilutions (usually 2-fold) of the antimicrobial agent.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510171,lactose free food,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0171,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510171,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lactose free food,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/hancestro_0004,ancestral group,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,hancestro:0004,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ancestral group,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001493,hospital discharge date,,,FALSE,,,,,http://purl.obolibrary.org/obo/GENEPIO_0001486,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001493,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,hospital discharge date,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530144,filet,,A boneless cut or slice of meat or fish.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0144,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530144,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,filet,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A boneless cut or slice of meat or fish.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470156,preservation by adding antibiotics,,"Preservation by adding antibiotics (e.g. nisin, tylosine, subtlin, bacitracin, chlorotetracyclin, oxytetracyclin) to kill micro organisms or stop their growth.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0156,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470156,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,preservation by adding antibiotics,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Preservation by adding antibiotics (e.g. nisin, tylosine, subtlin, bacitracin, chlorotetracyclin, oxytetracyclin) to kill micro organisms or stop their growth.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C211615,All-Cause Mortality,all-cause mortality|All-Cause Mortality|All Cause Mortality,The total number of deaths from any cause in a specific group of people over a specific period of time.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,all-cause mortality|All-Cause Mortality|All Cause Mortality,,,,NCIT:C211615,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,All-Cause Mortality,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The total number of deaths from any cause in a specific group of people over a specific period of time.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001781,National Laboratory for Enteric Pathogens Identifier,,"An NLEP ID is a unique identifier code for a sample registered with the Canadian ""National Laboratory for Enteric Pathogens"" (NLEP)",FALSE,,,,,,,,,,,,,,,,,,,,,Pulsenet Canada spreadsheet.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001781,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,National Laboratory for Enteric Pathogens Identifier,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"An NLEP ID is a unique identifier code for a sample registered with the Canadian ""National Laboratory for Enteric Pathogens"" (NLEP)",,,,NLEP ID,,,,
http://purl.obolibrary.org/obo/GAZ_00007113,United States Minor Outlying Islands,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00007113,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,United States Minor Outlying Islands,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03480012,packed in heavily sweetened liquid,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=K0012,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03480012,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,packed in heavily sweetened liquid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001777,draft tuberculosis contextual data standard,,"The draft tuberculosis contextual data standard is a data standard for the collection of contextual information of a given tuberculosis case that pertain to typing, clinical treatment, and potential research questions.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001777,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,draft tuberculosis contextual data standard,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"The draft tuberculosis contextual data standard is a data standard for the collection of contextual information of a given tuberculosis case that pertain to typing, clinical treatment, and potential research questions.",,,,,,,,
http://purl.obolibrary.org/obo/HP_0002027,Abdominal pain,Gastrointestinal pain|Gastro pain,"An unpleasant sensation characterized by physical discomfort (such as pricking, throbbing, or aching) and perceived to originate in the abdomen.",FALSE,,,,,,,,,,,,,,"Abdominal pain can be crampy, achy, dull, intermittent or sharp. The terms stomach ache and stomach cramps are nonmedical terms often used to describe pain in the mid- or upper abdominal area, even though it is not the case that the (smooth) muscles of the stomach or the abdomen have cramps. Stomach pain is another layperson term commonly used to refer to abdominal pain.",,,,,,,,,,,,,,,,,,UMLS:C0000737|SNOMEDCT_US:21522001|MEDDRA:10000081,,,,,,,,,,,,,,,,,,,,,,,,Gastrointestinal pain|Gastro pain,Stomach pain|Pain in stomach|Abdominal pain,,,,HP:0002027,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,http://purl.oboInOwllibrary.org/oboInOwl/hp#hposlim_core,,,,,,,,Abdominal pain,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An unpleasant sensation characterized by physical discomfort (such as pricking, throbbing, or aching) and perceived to originate in the abdomen.",,,,,,,,
http://purl.obolibrary.org/obo/HP_0002028,Chronic diarrhea,Chronic diarrhoea|Chronic diarrhea,"The presence of chronic diarrhea, which is usually taken to mean diarrhea that has persisted for over 4 weeks.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0401151|SNOMEDCT_US:236071009,,,,,,,,,,,,,,,,,,,,,,,,,Chronic diarrhoea|Chronic diarrhea,,,,HP:0002028,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Chronic diarrhea,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The presence of chronic diarrhea, which is usually taken to mean diarrhea that has persisted for over 4 weeks.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002029,data protection item,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002029,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,data protection item,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0017014,interstitial lung disease specific to childhood,pediatric interstitial lung disease|paediatric interstitial lung disease|interstitial lung disease of childhood|childhood interstitial lung disease|chILD syndrome|chILD|ILD specific to childhood,A interstitial lung disease that occurs during childhood.,FALSE,,,,,,,,,,,,,,The terms chILD or chILD syndrome (not preferred) have been coined to memorize easily and to identify a phenotype that requires prompt and expert evaluation.,,,,,,,,,,,,,,,,,,UMLS:C5679752|SCTID:328661000119108|Orphanet:264656|MEDGEN:1842412,,,,,,,,,,,,,,,,,,,,,,,,,pediatric interstitial lung disease|paediatric interstitial lung disease|interstitial lung disease of childhood|childhood interstitial lung disease|chILD syndrome|chILD|ILD specific to childhood,,,,MONDO:0017014,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar|http://purl.oboInOwllibrary.org/oboInOwl/mondo#ordo_group_of_disorders|http://purl.oboInOwllibrary.org/oboInOwl/mondo#disease_grouping,,,,,,,,interstitial lung disease specific to childhood,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A interstitial lung disease that occurs during childhood.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C157740,Cancer Surgery,Cancer Surgery,Surgical procedures targeted at minimizing or eliminating a neoplastic process.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Cancer Surgery,,,,NCIT:C157740,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Cancer Surgery,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Surgical procedures targeted at minimizing or eliminating a neoplastic process.,,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000069,number of degrees of freedom,,"The number degree of freedom is a count evaluating the number of values in a calculation that can vary. In statistics, the number of degrees of freedom ν is equal to N-1 in the case of the direct measurement of a quantity estimated by the arithmetic mean of N independent observations.",FALSE,,,,,,,,,,,,,,,,,,,,,the rank of the quadratic form (mathematical definition)|http://www.optique-ingenieur.org/en/courses/OPI_ang_M07_C01/co/Contenu_07.html|http://stats.stackexchange.com/questions/16921/how-to-understand-degrees-of-freedom,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000069,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,number of degrees of freedom,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra|Alejandra Gonzalez-Beltran|Orlaith Burke|Hanna Ćwiek,,,,"The number degree of freedom is a count evaluating the number of values in a calculation that can vary. In statistics, the number of degrees of freedom ν is equal to N-1 in the case of the direct measurement of a quantity estimated by the arithmetic mean of N independent observations.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C43169,Bottle,Bottle|BOTTLE,A vessel with a narrow neck designed to accept a specific closure.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Bottle|BOTTLE,,,,NCIT:C43169,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Bottle,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A vessel with a narrow neck designed to accept a specific closure.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102292,Vela Sentosa SQ301,,A DNA sequencer manufactured by Vela which applies semiconductor sequencing technology for rapid and cost-effective targeted sequencing.,FALSE,,,,,,,Sentosa SQ301,,,,,,,,,,,,,,https://www.veladx.com/product/ngs-instruments/sentosa-sq301.html,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102292,,,,,,,,,,,,,https://orcid.org/0000-0002-7654-6902|https://orcid.org/0000-0001-8008-8249,2026-03-30T14:26:04.627Z,,,,,,,,,,,,,,,,,,,Vela Sentosa SQ301,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A DNA sequencer manufactured by Vela which applies semiconductor sequencing technology for rapid and cost-effective targeted sequencing.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100036,finger prick,,"A collecting specimen from organism process in which a skin site free of surface arterial flow is pierced with a sterile lancet, after a capillary blood droplet is formed a sample is captured in a capillary tupe.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100036,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,finger prick,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A collecting specimen from organism process in which a skin site free of surface arterial flow is pierced with a sterile lancet, after a capillary blood droplet is formed a sample is captured in a capillary tupe.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490226,one component adhesive,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0226,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490226,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,one component adhesive,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/EO_0007027,EO_0007027,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,EO:0007027,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01001788,marine ecosystem,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01001788,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,marine ecosystem,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00003594,fish meat,,The flesh of fish,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00003594,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,fish meat,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The flesh of fish,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0060492,chicken egg allergy,,An egg allergy triggered by Gallus gallus eggs.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0060492,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,chicken egg allergy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An egg allergy triggered by Gallus gallus eggs.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0060495,shellfish allergy,,A food allergy triggered by Crustacea or Mollusca.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0060495,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,shellfish allergy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A food allergy triggered by Crustacea or Mollusca.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100810,total nitrogen tn measurement method,total nitrogen (TN) measurement method,An environmental data field which describes the method used to measure total nitrogen (TN).,FALSE,,,,,,,PCDS:total_nitrogen_tn_measurement_method,,,,,,,PCDS: Provide the name of the procedure or technology used to measure TN.,,,,,,,,,,,,,,PCDS: Hach total nitrogen spectrophotometric test,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,total nitrogen (TN) measurement method,total nitrogen (TN) measurement method slot,,,,GENEPIO:0100810,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,total nitrogen tn measurement method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the method used to measure total nitrogen (TN).,,PCDS: The method used to measure total nitrogen (TN).,,,,,,
http://purl.obolibrary.org/obo/OBI_0002822,drag swab,,A specimen collection device consisting of a specimen pad made of sterile gauze which is aseptically attached to a pole by clips or to a string,FALSE,,,,,,,,,,,,,,,,,,,,,https://www.fda.gov/food/laboratory-methods-food/environmental-sampling-and-detection-salmonella-poultry-houses,,,,,drag swab,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,http://purl.obolibrary.org/obo/OBI_0002819,,,,,,,,,,,,,,,,,OBI:0002822,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,drag swab,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://orcid.org/0000-0002-8844-9165,,,,A specimen collection device consisting of a specimen pad made of sterile gauze which is aseptically attached to a pole by clips or to a string,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000115,beef chuck flap/edge roast,,A roast cut is made during fabrication to square off the chuck roll.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000115,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef chuck flap/edge roast,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A roast cut is made during fabrication to square off the chuck roll.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510216,food allergen labelling about eggs and products thereof,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0216,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510216,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food allergen labelling about eggs and products thereof,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001004,equal to,,"The ""equal to"" comparator indicates that a given substance was present at the given quantity or concentration.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,==,,,,,,GENEPIO:0001004,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,equal to,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"The ""equal to"" comparator indicates that a given substance was present at the given quantity or concentration.",,,,==,,,,
http://purl.obolibrary.org/obo/FOODON_02000146,beef sirloin (raw),,A raw beef sirloin cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000146,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef sirloin (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef sirloin cut.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000119,beef short loin (raw),,A raw beef short loin cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000119,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef short loin (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef short loin cut.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001760,cubic metre per second,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001760,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,cubic metre per second,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100517,AMR testing intermediate breakpoint,antimicrobial resistance testing intermediate breakpoint|AMR_testing_intermediate_breakpoint|AMR testing intermediate breakpoint,An antimicrobial resistance (AMR) field which describes intermediate measurement(s) where a sample would be considered to have an “intermediate” phenotype for this antibiotic.,FALSE,,,,,,,PCDS:amr_testing_intermediate_breakpoint|PCDS:*_intermediate_breakpoint,,,,,,,"PCDS: This field should only contain a number (either an integer or a number with decimals), since the '>_<' qualifier is implied.",,,,,,,,,,,Dependent on the units specified in the 'AMR measurement units field' [GENEPIO:0100523].,,,PCDS: 16,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,antimicrobial resistance testing intermediate breakpoint|AMR_testing_intermediate_breakpoint|AMR testing intermediate breakpoint,antimicrobial resistance testing intermediate breakpoint slot|antimicrobial resistance testing intermediate breakpoint field|AMR testing intermediate breakpoint slot,,,,GENEPIO:0100517,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-12-22T00:55:53.808Z,,,,,,,,,,,,,,,,,,,AMR testing intermediate breakpoint,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An antimicrobial resistance (AMR) field which describes intermediate measurement(s) where a sample would be considered to have an “intermediate” phenotype for this antibiotic.,,"PCDS: The intermediate measurement(s), in the units specified in the ""AMR_measurement_units"" field, where a sample would be considered to have an ""intermediate"" phenotype for this antibiotic",,,,,,
http://purl.obolibrary.org/obo/CHEBI_2790,apramycin,,"An aminoglycoside that is 2-deoxystreptamine that is substituted on the oxygen at position 4 by an (8<i>R</i>)-2-amino-8-<em>O</em>-(4-amino-4-deoxy-α-<small>D</small>-glucopyranosyl)-2,3,7-trideoxy-7-(methylamino)-<small>D</small>-glycero-α-<small>D</small>-<i>allo</i>-octodialdo-1,5:8,4-dipyranos-1-yl) group.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:40708,,,,,,CHEBI:2790,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,apramycin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An aminoglycoside that is 2-deoxystreptamine that is substituted on the oxygen at position 4 by an (8<i>R</i>)-2-amino-8-<em>O</em>-(4-amino-4-deoxy-α-<small>D</small>-glucopyranosyl)-2,3,7-trideoxy-7-(methylamino)-<small>D</small>-glycero-α-<small>D</small>-<i>allo</i>-octodialdo-1,5:8,4-dipyranos-1-yl) group.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038784,pararectal lymph node of pelvis,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:278181,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0038784,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,pararectal lymph node of pelvis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038787,superior ileocolic lymph node,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:278188,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0038787,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,superior ileocolic lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03460101,lactic acid fermentation,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=H0101,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03460101,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lactic acid fermentation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_11254,Brill-Zinsser disease,,"An epidemic typhus that is a mild form of the disease, which recurs in someone after a long period of latency due to immunosuppression, malnutrition or other illnesses.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:11254,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,Brill-Zinsser disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An epidemic typhus that is a mild form of the disease, which recurs in someone after a long period of latency due to immunosuppression, malnutrition or other illnesses.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_11258,cat-scratch disease,,"A bartonellosis that results_in infection located_in lymph node, has_material_basis_in Bartonella henselae or has_material_basis_in Bartonella clarridgeiae, which are transmitted_by scratch or bite of a kitten, or transmitted_by contact of animal's saliva with an eye or through broken skin. The infection has_symptom regional lymphadenopathy, has_symptom headache, has_symptom chills, has_symptom backache, and has_symptom abdominal pain.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:11258,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,cat-scratch disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A bartonellosis that results_in infection located_in lymph node, has_material_basis_in Bartonella henselae or has_material_basis_in Bartonella clarridgeiae, which are transmitted_by scratch or bite of a kitten, or transmitted_by contact of animal's saliva with an eye or through broken skin. The infection has_symptom regional lymphadenopathy, has_symptom headache, has_symptom chills, has_symptom backache, and has_symptom abdominal pain.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_11256,typhus,,"A primary bacterial infectious disease that refers to a group of diseases, located in endothelial cells of the small venous, arterial, and capillary vessels, has_material_basis_in Rickettsia bacteria, which are transmitted by lice, transmitted by fleas, and transmitted by mites.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:11256,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,typhus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A primary bacterial infectious disease that refers to a group of diseases, located in endothelial cells of the small venous, arterial, and capillary vessels, has_material_basis_in Rickettsia bacteria, which are transmitted by lice, transmitted by fleas, and transmitted by mites.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100716,microbiological identification tag (Beckson Dickson BBL Crystal),microbiological identification data type (Beckson Dickson BBL Crystal),A microbiological characterization data tag which indicates the presence of microbiological identification data derived using the Beckson Dickson BBL Crystal identification system.,FALSE,,,,,,,microbiological identification (Beckson Dickson BBL Crystal),,,,,,,Example Guidance: Use this tag to indicate additional data is available that provides identification information from microbiology properties generated using Beckson Dickson BBL Crystal.,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,microbiological identification data type (Beckson Dickson BBL Crystal),,,,GENEPIO:0100716,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-05-18T19:08:34.869Z,,,,,,,,,,,,,,,,,,,microbiological identification tag (Beckson Dickson BBL Crystal),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A microbiological characterization data tag which indicates the presence of microbiological identification data derived using the Beckson Dickson BBL Crystal identification system.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001709,lab test datum,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001709,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,lab test datum,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HP_0001612,Weak cry,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0234860|SNOMEDCT_US:2120003,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0001612,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Weak cry,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001459,dehosting method,dehosting method,A data field which describes the method used to remove host reads from the pathogen sequence.,FALSE,,,,,,,PCDS:consensus_sequence_name,,,,,,,PCDS: Provide the name and version number of the consensus sequence.,,,,,,,,,,,,,,PCDS: mvsassembly3,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,dehosting method,dehosting method slot,,,,GENEPIO:0001459,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,dehosting method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the method used to remove host reads from the pathogen sequence.,,PCDS: The name of the consensus sequence.,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000112,beef chuck arm roast (raw),,A raw beef chuck arm roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000112,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef chuck arm roast (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef chuck arm roast.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03309383,"fish fillet (breaded, frozen)",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://bioregistry.io/reference/siren:F9383,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03309383,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"fish fillet (breaded, frozen)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000392,Gurage,,"A Semitic Eastern population with a population size of 1.9 millions. Subdivided into three groups: East, North, West.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000392,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Gurage,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A Semitic Eastern population with a population size of 1.9 millions. Subdivided into three groups: East, North, West.",,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000399,Sandawe,,A Khoisan Eastern population with a population size of 0.06 million,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000399,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Sandawe,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Khoisan Eastern population with a population size of 0.06 million,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000397,Tigré,,A Semitic Eastern population with a population size of 1.5 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000397,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Tigré,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Semitic Eastern population with a population size of 1.5 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000398,Baka_South_Sudan,,A Pygmy Eastern population with a population size of 0.25 million,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000398,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Baka_South_Sudan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Pygmy Eastern population with a population size of 0.25 million,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000393,Habesha,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000393,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Habesha,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000394,Rashaida,,A Semitic Eastern population with a population size of 0.2 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000394,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Rashaida,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Semitic Eastern population with a population size of 0.2 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000391,Amhara,,A Semitic Eastern population with a population size of 24 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000391,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Amhara,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Semitic Eastern population with a population size of 24 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000396,Tigrinya,,A Semitic Eastern population with a population size of 10.3 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000396,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Tigrinya,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Semitic Eastern population with a population size of 10.3 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000390,Lugbara,,A Sudanic population with a population size of 11 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000390,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Lugbara,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Sudanic population with a population size of 11 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000395,Sudanese Arab,,A Semitic Eastern population with a population size of 28 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000395,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Sudanese Arab,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Semitic Eastern population with a population size of 28 millions,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_6919,mezlocillin,,A penicillin in which the substituent at position 6 of the penam ring is a (2<i>R</i>)-2-[3-(methanesulfonyl)-2-oxoimidazolidine-1-carboxamido]-2-phenylacetamido group.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:6919,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,mezlocillin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A penicillin in which the substituent at position 6 of the penam ring is a (2<i>R</i>)-2-[3-(methanesulfonyl)-2-oxoimidazolidine-1-carboxamido]-2-phenylacetamido group.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00003004,animal,,A whole animal.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=B1297,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00003004,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,animal,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A whole animal.,,,,,,,,
http://purl.obolibrary.org/obo/GSSO_004005,transmasculine,trans masculine,Having a masculine gender (identity) which is different from the sex one was assigned at birth.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://www.wikidata.org/wiki/Q27679766|https://mogai-genders.fandom.com/wiki/Transmasculine,,,,,,,,,,,,,,,,,,,,,,,,,trans masculine,,,,GSSO:004005,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gsso.owl,,,,,,,,,transmaskulin|transmasculino|transmasculine,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Having a masculine gender (identity) which is different from the sex one was assigned at birth.,,,,,,,,
http://purl.obolibrary.org/obo/OBA_2050099,age of onset of anorexia nervosa,age at onset of anorexia nervosa|age anorexia nervosa symptoms begin,The age at which anorexia nervosa manifestations first appear.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,age at onset of anorexia nervosa|age anorexia nervosa symptoms begin,,,,OBA:2050099,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age of onset of anorexia nervosa,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The age at which anorexia nervosa manifestations first appear.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0646,Gambian in Gambia (SGDP),Gambian,A population made up of 2 samples from Gambian individuals recruited in Gambia as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation African.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Gambian,,,,HANCESTRO:0646,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Gambian in Gambia (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Gambian individuals recruited in Gambia as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation African.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0647,Ju|'hoan North in Namibia (SGDP),Ju|'hoan North,A population made up of 4 samples from Ju|'hoan North individuals recruited in Namibia as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation African.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Ju|'hoan North,,,,HANCESTRO:0647,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Ju|'hoan North in Namibia (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 4 samples from Ju|'hoan North individuals recruited in Namibia as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation African.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0644,Dinka in Sudan (SGDP),Dinka,A population made up of 3 samples from Dinka individuals recruited in Sudan as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation African.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Dinka,,,,HANCESTRO:0644,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Dinka in Sudan (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 3 samples from Dinka individuals recruited in Sudan as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation African.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0640,Bantu Herero in Botswana Or Namibia (SGDP),Bantu Herero,A population made up of 2 samples from Bantu Herero individuals recruited in Botswana Or Namibia as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation African.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Bantu Herero,,,,HANCESTRO:0640,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Bantu Herero in Botswana Or Namibia (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Bantu Herero individuals recruited in Botswana Or Namibia as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation African.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0645,Esan in Nigeria (SGDP),Esan,A population made up of 2 samples from Esan individuals recruited in Nigeria as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation African.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Esan,,,,HANCESTRO:0645,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Esan in Nigeria (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Esan individuals recruited in Nigeria as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation African.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0643,Biaka in Central African Republic (SGDP),Biaka,A population made up of 2 samples from Biaka individuals recruited in Central African Republic as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation African.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Biaka,,,,HANCESTRO:0643,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Biaka in Central African Republic (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Biaka individuals recruited in Central African Republic as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation African.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0642,Bantu Tswana in Botswana Or Namibia (SGDP),Bantu Tswana,A population made up of 2 samples from Bantu Tswana individuals recruited in Botswana Or Namibia as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation African.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Bantu Tswana,,,,HANCESTRO:0642,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Bantu Tswana in Botswana Or Namibia (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Bantu Tswana individuals recruited in Botswana Or Namibia as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation African.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0649,Luhya in Kenya (SGDP),Luhya,A population made up of 2 samples from Luhya individuals recruited in Kenya as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation African.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Luhya,,,,HANCESTRO:0649,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Luhya in Kenya (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Luhya individuals recruited in Kenya as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation African.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0641,Bantu Kenya in Kenya (SGDP),Bantu Kenya,A population made up of 2 samples from Bantu Kenya individuals recruited in Kenya as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation African.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Bantu Kenya,,,,HANCESTRO:0641,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Bantu Kenya in Kenya (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Bantu Kenya individuals recruited in Kenya as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation African.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0648,Khomani San in South Africa (SGDP),Khomani San,A population made up of 2 samples from Khomani San individuals recruited in South Africa as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation African.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Khomani San,,,,HANCESTRO:0648,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Khomani San in South Africa (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Khomani San individuals recruited in South Africa as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation African.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530210,outdoor/open-air organic plant cultivation,,The organic cultivation of plants in an unsheltered area.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0210,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530210,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,outdoor/open-air organic plant cultivation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The organic cultivation of plants in an unsheltered area.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000145,beef sirloin,,A beef primal cut that is contained within the larger cut 'beef loin'. It is located between the short loin and the round and includes the hip section and ends at the socket of the pelvis.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000145,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef sirloin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A beef primal cut that is contained within the larger cut 'beef loin'. It is located between the short loin and the round and includes the hip section and ends at the socket of the pelvis.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001791,isolate identifier specification,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001791,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,isolate identifier specification,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0001644,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_39410,"1,2,4-triazines",,"Any compound with a 1,2,4-triazine skeleton, in which nitrogen atoms replace carbon at positions 1, 2 and 4 of the core benzene ring structure.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:39410,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,"1,2,4-triazines",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Any compound with a 1,2,4-triazine skeleton, in which nitrogen atoms replace carbon at positions 1, 2 and 4 of the core benzene ring structure.",,,,,,,,
http://purl.obolibrary.org/obo/IDO_0000537,infectious agent host,,An organism bearing an infectious agent host role.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,IDO:0000537,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ido.owl,,,,,,,,,infectious agent host,,,,,,,,,,,,,,,,,,,,,,,,,,,,Lindsay Cowell|Alexander Diehl|Albert Goldfain,,,,An organism bearing an infectious agent host role.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000104,beef chuck roast (raw),,A raw beef chuck roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000104,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef chuck roast (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef chuck roast.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100429,sample collection project name,sample_collection_project_name|sample collection project name,A data field which describes the project/initiative/program for which the sample was collected.,FALSE,,,,,,,PCDS:sample_collection_project_name,,,,,,,"PCDS: Provide the name of the project and/or the project ID here. If the information is unknown or cannot be provided, leave blank or provide a null value.",,,,,,,,,,,,,,PCDS: Watershed Project (HA-120),,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,sample_collection_project_name|sample collection project name,sample collection project name slot,,,,GENEPIO:0100429,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,sample collection project name,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the project/initiative/program for which the sample was collected.,,PCDS: The name of the project/initiative/program for which the sample was collected.,,,,,,
http://purl.obolibrary.org/obo/CHEBI_16385,organic sulfide,,Compounds having the structure RSR (R ≠ H). Such compounds were once called thioethers.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:9340|CHEBI:26960|CHEBI:13694,,,,,,CHEBI:16385,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,organic sulfide,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Compounds having the structure RSR (R ≠ H). Such compounds were once called thioethers.,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_7777,Chondrichthyes,,,FALSE,,,,,,,fishes|fish|cartilaginous fishes,,,,,,,,,,,,,,,,,,,Chondrichthyes,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:7777,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Chondrichthyes,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_7776,Gnathostomata <vertebrates>,,,FALSE,,,,,,,jawed vertebrates|Gnathostomata,,,,,,,,,,,,,,,,,,,Gnathostomata <vertebrates>,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:7776,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Gnathostomata <vertebrates>,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102284,GeneMind FASTASeq 300,,A DNA sequencer manufactured by GeneMInd which uses high-density flow cells advanced base identification algorithms to perform targeted and whole-genome low-pass sequencing.,FALSE,,,,,,,FASTASeq 300,,,,,,,,,,,,,,https://en.genemind.com/product/fastaseq-300,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102284,,,,,,,,,,,,,https://orcid.org/0000-0002-7654-6902|https://orcid.org/0000-0001-8008-8249,2026-03-30T14:26:04.627Z,,,,,,,,,,,,,,,,,,,GeneMind FASTASeq 300,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A DNA sequencer manufactured by GeneMInd which uses high-density flow cells advanced base identification algorithms to perform targeted and whole-genome low-pass sequencing.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100583,taxonomic identification process,taxonomic identification method,A data field which describes the type of planned process by which an organismal entity is associated with a taxon or taxa.,FALSE,,,,,,,PCDS:taxonomic_identification_process,,,,,,,"PCDS: Provide the type of method used to determine the taxonomic identity of the organism by selecting a value from the pick list. If the information is unknown or cannot be provided, leave blank or provide a null value.",,,,,,,,,,,,,,PCDS: PCR assay [OBI:0002740],,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,taxonomic_identification_process|taxonomic identification process,taxonomic identification process slot,taxonomic identification method,,,GENEPIO:0100583,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,taxonomic identification process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the type of planned process by which an organismal entity is associated with a taxon or taxa.,,PCDS: The type of planned process by which an organismal entity is associated with a taxon or taxa.,,,,,,
http://purl.obolibrary.org/obo/DOID_8481,rheumatic myocarditis,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:8481,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,rheumatic myocarditis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_85129,ristocetin,,A heterodetic cyclic peptide  that is produced by species of <em>Amycolatopsis</em> and <em>Nocardia</em>.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:85129,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,ristocetin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A heterodetic cyclic peptide  that is produced by species of <em>Amycolatopsis</em> and <em>Nocardia</em>.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0002041,Intractable diarrhea,Intractable diarrhoea,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0743178,,,,,,,,,,,,,,,,,,,,,,,,,Intractable diarrhoea,,,,HP:0002041,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Intractable diarrhea,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000395,channel of a watercourse,,"A depressed landform which physically confines a river, slough or ocean strait, and which consists of a bed and banks.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,TGN:23451|TGN:21137|SWEETRealm:Channel|Geonames:U.SCSU|Geonames:U.SCNU|Geonames:H.CHN|FTT:470|FTT:469|FTT:468|FTT:466|FTT:465|FTT:464|FTT:463|FTT:462|FTT:461|FTT:233|FTT:1192|EcoLexicon:sea_channel|EcoLexicon:channel,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00000395,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,channel of a watercourse,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A depressed landform which physically confines a river, slough or ocean strait, and which consists of a bed and banks.",,,,,,,,
http://purl.obolibrary.org/obo/HP_0001507,Growth abnormality,Growth issue|Growth abnormality|Abnormal growth,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0262361,,,,,,,,,,,,,,,,,,,,,,,HP:0008904,,Growth issue|Growth abnormality|Abnormal growth,,,,HP:0001507,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Growth abnormality,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100828,number of unique reads,number of unique reads,A data field which describes the number of unique reads generated by the sequencing process.,FALSE,,,,,,,PCDS:number_of_unique_reads,,,,,,,PCDS: Provide a numerical value (no need to include units).,,,,,,,,,,,,,,PCDS: 248236,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,number of unique reads,number of unique reads slot,,,,GENEPIO:0100828,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,number of unique reads,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the number of unique reads generated by the sequencing process.,,PCDS: The number of unique reads generated by the sequencing process.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001484,ns per 100 kbp,Ns per 100 kilobase pairs|Ns per 100 kbp,"A data field which describes the number of N (unidentified nucleotide) symbols present in the consensus fasta sequence, per 100kbp of sequence.",FALSE,,,,,,,PCDS:ns_per_100_kbp,,,,,,,PCDS: Provide a numerical value (no need to include units).,,,,,,,,,,,,,,PCDS: 330,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,Ns per 100 kilobase pairs|Ns per 100 kbp,unidentified nucleotides per 100 kbp slot|unidentified nucleotides per 100 kbp field|Ns per 100 kilobase pairs slot|Ns per 100 kilobase pairs field|Ns per 100 kbp slot,,,,GENEPIO:0001484,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,ns per 100 kbp,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A data field which describes the number of N (unidentified nucleotide) symbols present in the consensus fasta sequence, per 100kbp of sequence.",,PCDS: The number of ambiguous bases (Ns) normalized per 100 kilobasepairs (kbp).,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001464,exposure history record,,"An exposure can be narrowed down to a single date, or can be reasoned to exist with a lower and/or upper bound date.  A single date exposure has lower and upper bound dates set as the same value.",FALSE,,,,,,,,,,,,,,"An exposure can be narrowed down to a single date, or can be reasoned to exist with a lower and/or upper bound date.  A single date exposure has lower and upper bound dates set as the same value.",,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001464,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,exposure history record,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001807,obsolete: NCBI BioSample ID -,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001807,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: NCBI BioSample ID -,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/OBI_0001616,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000128,"beef strip steak (boneless, raw)",,A raw and boneless beef strip steak.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000128,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"beef strip steak (boneless, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw and boneless beef strip steak.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0000066,investigation,,"a planned process that consists of parts: planning, study design execution, documentation and which produce conclusion(s).",FALSE,,,,,,,,,,,,,,,,,,,,"Following OBI call November 2012,26th: it was decided there was no need for adding achieves objective of drawing conclusion as existing relations were providing equivalent ability. this note closes the issue and validates the class definition to be part of the OBI core editor = PRS|Could add specific objective specification",OBI branch derived,,,,,investigation,,"Lung cancer investigation using expression profiling, a stem cell transplant investigation, biobanking is not an investigation, though it may be part of an investigation",,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0000066,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,investigation,,,,,,,,,,,,,,,,,,,,,,,,,,,,Bjoern Peters,,,,"a planned process that consists of parts: planning, study design execution, documentation and which produce conclusion(s).",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490349,metalized paper laminated with plastic,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0349,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490349,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,metalized paper laminated with plastic,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_9212,sparfloxacin,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:9212,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,sparfloxacin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_9215,spectinomycin,,A pyranobenzodioxin and antibiotic that is active against gram-negative bacteria and used (as its dihydrochloride pentahydrate) to treat gonorrhea. It is produced by the bacterium <em>Streptomyces spectabilis</em>.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:45551,,,,,,CHEBI:9215,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,spectinomycin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A pyranobenzodioxin and antibiotic that is active against gram-negative bacteria and used (as its dihydrochloride pentahydrate) to treat gonorrhea. It is produced by the bacterium <em>Streptomyces spectabilis</em>.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02021763,pork chop (boneless),,A boneless pork chop.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02021763,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pork chop (boneless),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A boneless pork chop.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490395,polyethylene (high density) - polyamide container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0395,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490395,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,polyethylene (high density) - polyamide container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001007,NCBI Antibiogram standard,,The NCBI antibiogram standard details the reporting specifications for antimicrobial susceptibility and resistance data derived from drug resistant pathogens. This information is submitted as an antibiogram table on BioSample records.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001007,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI Antibiogram standard,,,,,,,,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/biosample/docs/antibiogram/,,,,,,Damion Dooley,,,,The NCBI antibiogram standard details the reporting specifications for antimicrobial susceptibility and resistance data derived from drug resistant pathogens. This information is submitted as an antibiogram table on BioSample records.,,,"order:
OBI:0001616 # specimen identifier
OBI:0001614 # GenBank ID
GENEPIO:0001100 # antibiogram drug test model
GENEPIO:0002062 # amr testing reference standard
GENEPIO:0002045 # amr resistance testing method
GENEPIO:0002047 # ... version or reagent
GENEPIO:0002049 # amr testing platform
GENEPIO:0002056 # ... vendor",,,,,
http://purl.obolibrary.org/obo/FOODON_03510277,phytosterol claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0277,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510277,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,phytosterol claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000228,beef prime rib roast (raw),,A raw beef prime rib roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000228,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef prime rib roast (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef prime rib roast.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001508,diagnostic pcr protocol,diagnostic pcr protocol 3|diagnostic pcr protocol 2|diagnostic pcr protocol 1|GENEPIO:0001514|GENEPIO:0001511,A data field which describes the name and version number of the protocol used for diagnostic marker amplification.,FALSE,,,,,,,PCDS:diagnostic_pcr_protocol_*,,,,,,,PCDS: The name and version number of the protocol used for carrying out a diagnostic PCR test. This information can be compared to sequence data for evaluation of performance and quality control.,,,,,,,,,,,,,,PCDS: PCREGene 2.0,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,diagnostic pcr protocol 3|diagnostic pcr protocol 2|diagnostic pcr protocol 1|GENEPIO:0001514|GENEPIO:0001511,,,,GENEPIO:0001508,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,diagnostic pcr protocol,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the name and version number of the protocol used for diagnostic marker amplification.,,PCDS: The name and version number of the protocol used for diagnostic marker amplification.,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490212,edible container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0212,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490212,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,edible container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0010000,multicellular anatomical structure,multicellular structure,An anatomical structure that has more than one cell as a part.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FBbt:00100313|CARO:0010000,,,,,,,,,,,,,,,,,,,,,,,,,multicellular structure,,,,UBERON:0010000,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl|http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,multicellular anatomical structure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An anatomical structure that has more than one cell as a part.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0002809,surgical N95 respirator,,A N95 respirator which has been approved by the FDA as a surgical mask.,FALSE,,,,,,,surgical N95 respirator|surgical N95|medical respirator|healthcare respirator,,,,,,,,,,,,,,https://multimedia.3m.com/mws/media/1794572O/surgical-n95-vs-standard-n95-which-to-consider.pdf,,,,,surgical N95 respirator,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0002809,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,surgical N95 respirator,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://orcid.org/0000-0002-8844-9165,,,https://github.com/obi-ontology/obi/issues/1193,A N95 respirator which has been approved by the FDA as a surgical mask.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0032101,Unusual infection,,"A type of infection that is regarded as a sign of a pathological susceptibility to infection. There are five general subtypes. (i) Opportunistic infection, meaning infection by a pathogen that is not normally able to cause infection in a healthy host (e.g., pneumonia by Pneumocystis jirovecii or CMV); (ii) Unusual location (focus) of an infection (e.g., an aspergillus brain abscess); (iii) a protracted course or lack of adequate response to treatment (e.g., chronic rhinosinusitis); (iv) Unusual severity or intensity of an infection; and (v) unusual recurrence of infections.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0032101,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Unusual infection,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A type of infection that is regarded as a sign of a pathological susceptibility to infection. There are five general subtypes. (i) Opportunistic infection, meaning infection by a pathogen that is not normally able to cause infection in a healthy host (e.g., pneumonia by Pneumocystis jirovecii or CMV); (ii) Unusual location (focus) of an infection (e.g., an aspergillus brain abscess); (iii) a protracted course or lack of adequate response to treatment (e.g., chronic rhinosinusitis); (iv) Unusual severity or intensity of an infection; and (v) unusual recurrence of infections.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470133,spray-drying,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0133,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470133,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,spray-drying,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000010,transport feature,,"A construction which enables the movement of humans, their animals or their vehicles.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FTT:83,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00000010,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,transport feature,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A construction which enables the movement of humans, their animals or their vehicles.",,,,,,,,
http://purl.obolibrary.org/obo/BFO_0000034,function,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,BFO:0000034,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/cob.owl,,,,,,,,,function,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001554,other human exposure,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001554,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,other human exposure,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100779,sampling weather conditions,sampling weather conditions,An environmental data field which describes the state of the atmosphere at a given place during sampling.,FALSE,,,,,,,PCDS:sampling_weather_conditions,,,,,,,PCDS: Provide the weather conditions at the time of sample collection.,,,,,,,,,,,,,,PCDS: Rain,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,sampling weather conditions,sampling weather conditions slot,,,,GENEPIO:0100779,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,sampling weather conditions,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the state of the atmosphere at a given place during sampling.,,"PCDS: The state of the atmosphere at a place and time as regards heat, dryness, sunshine, wind, rain, etc.",,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001598,epigenetic markers objective,,"DNA methylation, histone modification, chromatin accessibility datasets",FALSE,,,,,,,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/books/NBK54364/,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001598,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,epigenetic markers objective,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"DNA methylation, histone modification, chromatin accessibility datasets",,,,epigenetic markers,,,,
http://purl.obolibrary.org/obo/FOODON_02020539,piece of turkey breast (skinless),,A piece of skinless turkey breast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020539,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of turkey breast (skinless),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A piece of skinless turkey breast.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002036,phenotypic antimicrobial drug susceptibility test datum,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"This covers the following entities:

'has member' some 'antimicrobial phenotype'
'has member' some 'antimicrobial resistance test drug'
'has member' some 'antimicrobial resistance test platform'
'has member' some 'antimicrobial resistance testing method'
'has member' some 'antimicrobial resistance testing method version or reagent'
'has member' some 'antimicrobial resistance testing reference standard'
'has member' some 'antimicrobial resistance testing reference standard version'
'has member' some 'antimicrobial resistance tissue specificity'
'has member' some 'antimicrobial resistant plasmid type'
'has member' some 'automated testing platform vendor'
'has member' some 'draft antibiogram drug test model'
'has member' some 'in-vitro microbial susceptibility test'
'has member' some 'measurement comparator'
'has member' some 'MIC unit'
'has member' some 'MIC value'
'has member' some 'Minimum Inhibitory Concentration Test'
'has member' some 'test drug maximum concentration'
'has member' some 'test drug minimum concentration'
'has member' some 'tuberculosis treatment drug'",,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002036,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,phenotypic antimicrobial drug susceptibility test datum,,,,,,,,,,,,,,,,,,,,,,,,,,,,This is a collection of antibiotic resistance process parameters and outputs|Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001566,contig N99 length QC threshold,,The contig N99 length QC threshold is the minimum length that a contig N99 or NG99 length datum can be for satisfactory QC.  This threshold avoids having too many gene coding regions prematurely clipped inside short contigs.  An assembly having 1% or more of its content in less than 2Kbp chunks is cause for concern. Bacterial genes are generally about 1Kbp in length.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,2000,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001566,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,,,,,,,contig N99 length QC threshold,,,,,Assembly QC,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,The contig N99 length QC threshold is the minimum length that a contig N99 or NG99 length datum can be for satisfactory QC.  This threshold avoids having too many gene coding regions prematurely clipped inside short contigs.  An assembly having 1% or more of its content in less than 2Kbp chunks is cause for concern. Bacterial genes are generally about 1Kbp in length.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002060,Etest (device),Epsilometer test|E-Test,A manual in vitro diagnostic device used by laboratories to determine the MIC (Minimum Inhibitory Concentration) and whether or not a specific strain of bacterium or fungus is susceptible to the action of a specific antimicrobial.,FALSE,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Etest,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,Epsilometer test|E-Test,,,,GENEPIO:0002060,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Etest (device),,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A manual in vitro diagnostic device used by laboratories to determine the MIC (Minimum Inhibitory Concentration) and whether or not a specific strain of bacterium or fungus is susceptible to the action of a specific antimicrobial.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_28,endocrine system disease,,A disease of anatomical entity that is located_in endocrine glands which secretes a type of hormone directly into the bloodstream to regulate the body.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:28,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,endocrine system disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A disease of anatomical entity that is located_in endocrine glands which secretes a type of hormone directly into the bloodstream to regulate the body.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100461,isolated by,isolated_by|isolated by,"A data field which describes the name of the agency, organization or institution with which the individual who performed the isolation procedure is affiliated.",FALSE,,,,,,,PCDS:isolated_by,,,,,,,"PCDS: Provide the name of the agency, organization or institution that isolated the original isolate in full (avoid abbreviations). If the information is unknown or cannot be provided, leave blank or provide a null value.",,,,,,,,,,,,,,PCDS: Public Health Agency of Canada,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,isolated_by|isolated by,isolated by slot,,,,GENEPIO:0100461,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,isolated by,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A data field which describes the name of the agency, organization or institution with which the individual who performed the isolation procedure is affiliated.",,"PCDS: The name of the agency, organization or institution with which the individual who performed the isolation procedure is affiliated.",,,,,,
http://purl.obolibrary.org/obo/CHEBI_63276,mycinamicin,,Name for a family of macrolide antibiotics with more than twenty members produced by the rare actinomycete <em>Micromonospora griseorubida</em>.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:63276,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,mycinamicin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Name for a family of macrolide antibiotics with more than twenty members produced by the rare actinomycete <em>Micromonospora griseorubida</em>.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510077,no or reduced salt or sodium claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0077,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510077,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,no or reduced salt or sodium claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00004125,Autonomous Region (Portugal),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00004125,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Autonomous Region (Portugal),http://purl.obolibrary.org/obo/GAZ_00002944,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020869,"bison roast (boneless, raw)",,A raw and boneless bison roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020869,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"bison roast (boneless, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw and boneless bison roast.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_38582,difluorobenzene,,Any member of the class of fluorobenzenes containing a mono- or poly-substituted benzene ring carrying two fluorine atoms.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:38582,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,difluorobenzene,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any member of the class of fluorobenzenes containing a mono- or poly-substituted benzene ring carrying two fluorine atoms.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0001479,specimen from organism,,"A specimen that derives from an anatomical part or substance arising from an organism. Examples of tissue specimen include tissue, organ, physiological system, blood, or body location (arm).",FALSE,,,,,,,tissue specimen,,,,,,,,,,,,,,MO_954 organism_part,,,,"Damion Dooley note: OBI has a variety of subclasses like ""blood specimen"" and ""colon specimen"" etc. which we have not added here. The are mapped to UBERON terms indirectly through the logic ""derives from some [uberon term]"".  GenEpiO takes a different approach in describing this class with  lists for ""subject anatomical site"", ""subject body product"", and ""plant anatomy"".",specimen from organism,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0001479,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,specimen from organism,,,,,,,,,,,,,,,,,,,,,,,,,,,,"PERSON: Chris Stoeckert, Jie Zheng",,,,"A specimen that derives from an anatomical part or substance arising from an organism. Examples of tissue specimen include tissue, organ, physiological system, blood, or body location (arm).",,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0020641,respiratory tract neoplasm,"tumour of the respiratory tract|tumour of respiratory tract|tumor of the respiratory tract|tumor of respiratory tract|tract neoplasms, respiratory|tract neoplasm, respiratory|respiratory tract tumour|respiratory tract tumor|respiratory tract neoplasm|respiratory system neoplasm|neoplasms, respiratory tract|neoplasm, respiratory tract|neoplasm of the respiratory tract|neoplasm of respiratory tract","A benign or malignant, primary or metastatic neoplasm involving the respiratory tract.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0035244|SCTID:126667002|NCIT:C3355|MESH:D012142|MEDGEN:11200|ICD10CM:C30-C39|EFO:0003853,,,,,,,,,,,,,,,,,,,,,,,,,"tumour of the respiratory tract|tumour of respiratory tract|tumor of the respiratory tract|tumor of respiratory tract|tract neoplasms, respiratory|tract neoplasm, respiratory|respiratory tract tumour|respiratory tract tumor|respiratory tract neoplasm|respiratory system neoplasm|neoplasms, respiratory tract|neoplasm, respiratory tract|neoplasm of the respiratory tract|neoplasm of respiratory tract",,,,MONDO:0020641,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,respiratory tract neoplasm,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A benign or malignant, primary or metastatic neoplasm involving the respiratory tract.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000100,GENEPIO_0000100,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000100,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0001630,muscle organ,muscle,Organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work[GO].,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:Muscle|ZFA:0005145|XAO:0000172|VHOG:0001245|TAO:0005145|SCTID:71616004|MA:0000015|GAID:131|FMA:5022|EV:0100146|EMAPA:37474,,,,,,,,,,,,,,,,,,,,,,,,muscle,,,,,UBERON:0001630,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,muscle organ,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work[GO].,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020209,piece of chicken meat (with skin),,A piece of chicken meat that contains skin.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020209,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of chicken meat (with skin),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A piece of chicken meat that contains skin.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000234,beef cowboy steak (raw),,A raw beef cowboy steak.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000234,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef cowboy steak (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef cowboy steak.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0037518,epicolic lymph node,epicolic node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:16613,,,,,,,,,,,,,,,,,,,,,,,,,epicolic node,,,,UBERON:0037518,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,epicolic lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0037515,juxta-arterial mesenteric lymph node,juxta-arterial mesenteric node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:16610,,,,,,,,,,,,,,,,,,,,,,,,,juxta-arterial mesenteric node,,,,UBERON:0037515,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,juxta-arterial mesenteric lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0037514,intermediate mesenteric lymph node,intermediate mesenteric node|intermediate lymph node of small intestine|central superior mesenteric lymph node|central mesenteric lymph node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:16609,,,,,,,,,,,,,,,,,,,,,,,,,intermediate mesenteric node|intermediate lymph node of small intestine|central superior mesenteric lymph node|central mesenteric lymph node,,,,UBERON:0037514,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,intermediate mesenteric lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470107,food preservation process,,"The methods contributing to the prevention or retardation of microbial, enzymatic or oxidative spoilage and thus to the extension of shelf life. Index all methods for which information is available, even if a corresponding descriptor has already been used in *H. TREATMENT APPLIED*. Preservation descriptors refer to the finished food as a whole with these exceptions: (1) if the components of a multi-component food, such as cream pie, are preservation by different methods, index all methods; (2)  if chemical preservatives are declared on the label, always index them even if it is known that the preservative was introduced through or is only present in a component or ingredient of the food; and (3) if the preservation method for an ingredient is declared on the label (such as brie cheese made from pasteurized milk) index it. Also use *INGREDIENT preservation by THERMAL PROCESSING* or *INGREDIENT preservation by IRRADIATION* when ingredients have been pasteurized, ultrapasteurized, sterilized or irradiated.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0107,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470107,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food preservation process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The methods contributing to the prevention or retardation of microbial, enzymatic or oxidative spoilage and thus to the extension of shelf life. Index all methods for which information is available, even if a corresponding descriptor has already been used in *H. TREATMENT APPLIED*. Preservation descriptors refer to the finished food as a whole with these exceptions: (1) if the components of a multi-component food, such as cream pie, are preservation by different methods, index all methods; (2)  if chemical preservatives are declared on the label, always index them even if it is known that the preservative was introduced through or is only present in a component or ingredient of the food; and (3) if the preservation method for an ingredient is declared on the label (such as brie cheese made from pasteurized milk) index it. Also use *INGREDIENT preservation by THERMAL PROCESSING* or *INGREDIENT preservation by IRRADIATION* when ingredients have been pasteurized, ultrapasteurized, sterilized or irradiated.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_38785,morpholines,,Any compound containing morpholine as part of its structure.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:38785,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,morpholines,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any compound containing morpholine as part of its structure.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_37912,hydroxycoumarin,,Any coumarin carrying at least one hydroxy substituent.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:24692|CHEBI:24691,,,,,,CHEBI:37912,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,hydroxycoumarin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any coumarin carrying at least one hydroxy substituent.,,,,,,,,
http://purl.obolibrary.org/obo/ERO_0000833,ERO_0000833,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ERO:0000833,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002158,boolean value specification,,A boolean value specification indicates a presence (true value) or absence (false value) of a given feature.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002158,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/STATO_0000090,,,,,,boolean value specification,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A boolean value specification indicates a presence (true value) or absence (false value) of a given feature.,,,,boolean,,,,
http://purl.obolibrary.org/obo/FOODON_02000048,beef chuck tender steak,,A steak cut from the beef chuck tender.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000048,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef chuck tender steak,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A steak cut from the beef chuck tender.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001231,laboratory data,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001231,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,laboratory data,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000002,GSCID-BRC Project and Sample Application Standard,,The GSCID-BRC Project and Sample Application Standard captures standardized human pathogen and vector sequencing metadata to support epidemiologic and genotype-phenotype association studies for human infectious diseases.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"The NIAID page for specifications has a broken link for Core Project. This is the existing page:

https://www.niaid.nih.gov/research/dmid-metadata-standards-core-project

Link page is:

https://www.niaid.nih.gov/research/human-pathogen-and-vector-sequencing-metadata-standards",,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000002,,,,"This standard was developed by representatives of the Genome Sequencing Centers for Infectious Diseases (GSCIDs), the Bioinformatics Resource Centers (BRCs), and NIAID and informed by discussions and input with numerous collaborating scientists.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,GSCID-BRC Project and Sample Application Standard,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,The GSCID-BRC Project and Sample Application Standard captures standardized human pathogen and vector sequencing metadata to support epidemiologic and genotype-phenotype association studies for human infectious diseases.,,,,GSCID-BRC standard,,,,
http://purl.obolibrary.org/obo/CHEBI_100241,ciprofloxacin,,"A  quinolone that is quinolin-4(1<em>H</em>)-one bearing cyclopropyl, carboxylic acid, fluoro and piperazin-1-yl substituents at positions 1, 3, 6 and 7, respectively.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:41638|CHEBI:3717|CHEBI:102718,,,,,,CHEBI:100241,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,ciprofloxacin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A  quinolone that is quinolin-4(1<em>H</em>)-one bearing cyclopropyl, carboxylic acid, fluoro and piperazin-1-yl substituents at positions 1, 3, 6 and 7, respectively.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_100246,norfloxacin,,A quinolinemonocarboxylic acid with broad-spectrum antibacterial activity against most gram-negative and gram-positive bacteria. Norfloxacin is bactericidal and its mode of action depends on blocking of bacterial DNA replication by binding itself to an enzyme called DNA gyrase.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:7629,,,,,,CHEBI:100246,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,norfloxacin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A quinolinemonocarboxylic acid with broad-spectrum antibacterial activity against most gram-negative and gram-positive bacteria. Norfloxacin is bactericidal and its mode of action depends on blocking of bacterial DNA replication by binding itself to an enzyme called DNA gyrase.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000137,draft pathogenic epi case test record,,A laboratory test performed on a specimen from a patient with regard to potential pathogenic disease.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000137,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,draft pathogenic epi case test record,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A laboratory test performed on a specimen from a patient with regard to potential pathogenic disease.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_13521,tetanus neonatorum,,"A tetanus that occurs in newborn babies when the birth cord stump gets dirty through cutting it with an unclean blade or applying substances containing bacteria to it. The infection has symptom stiff body, has symptom muscle spasms, has symptom difficulty in breathing, and has symptom exhaustion.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:13521,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,tetanus neonatorum,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A tetanus that occurs in newborn babies when the birth cord stump gets dirty through cutting it with an unclean blade or applying substances containing bacteria to it. The infection has symptom stiff body, has symptom muscle spasms, has symptom difficulty in breathing, and has symptom exhaustion.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530213,under glass/protected organic plant cultivation,,The organic cultivation of plants in a sheltered area.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0213,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530213,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,under glass/protected organic plant cultivation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The organic cultivation of plants in a sheltered area.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_25000,lactone,,"Any cyclic carboxylic ester containing a 1-oxacycloalkan-2-one structure, or an analogue having unsaturation or heteroatoms replacing one or more carbon atoms of the ring.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:25000,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,lactone,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Any cyclic carboxylic ester containing a 1-oxacycloalkan-2-one structure, or an analogue having unsaturation or heteroatoms replacing one or more carbon atoms of the ring.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001418,exposure contact level,exposure contact level,A data field which describes the exposure transmission contact type.,FALSE,,,,,,,PCDS:exposure_contact_level,,,,,,,PCDS: Select exposure contact level from the pick-list.,,,,,,,,,,,,,,PCDS: Direct,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,exposure contact level,exposure contact level slot,,,,GENEPIO:0001418,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,exposure contact level,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the exposure transmission contact type.,,PCDS: The exposure transmission contact type.,,,,,,
http://purl.obolibrary.org/obo/CHEBI_37923,astromicin,,"An amino cyclitol glycoside that is <small>L</small>-<em>chiro</em>-inositol in which the hydroxy groups at positions 1, 4, and 6 are replaced by aminoacetyl)methylamino, amino, and methoxy groups, respectively, and in which the hydroxy group at position 3 is converted to the corresponding 2,6-diamino-2,3,4,6,7-pentadeoxy-β-<small>L</small>-<i>lyxo</i>-heptopyranoside. The major component of fortimicin, obtained from <em>Micromonospora olivasterospora</em>. It is administered (as the sulfate salt) by intramuscular injection or intravenous infusion for the treatment of severe systemic infections due to sensitive Gram-negative organisms.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:37923,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,astromicin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An amino cyclitol glycoside that is <small>L</small>-<em>chiro</em>-inositol in which the hydroxy groups at positions 1, 4, and 6 are replaced by aminoacetyl)methylamino, amino, and methoxy groups, respectively, and in which the hydroxy group at position 3 is converted to the corresponding 2,6-diamino-2,3,4,6,7-pentadeoxy-β-<small>L</small>-<i>lyxo</i>-heptopyranoside. The major component of fortimicin, obtained from <em>Micromonospora olivasterospora</em>. It is administered (as the sulfate salt) by intramuscular injection or intravenous infusion for the treatment of severe systemic infections due to sensitive Gram-negative organisms.",,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00003941,Collectivite d'outre-mer,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00003941,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Collectivite d'outre-mer,http://purl.obolibrary.org/obo/GAZ_00002940,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00003944,Region d'outre-mer,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00003944,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Region d'outre-mer,http://purl.obolibrary.org/obo/GAZ_00002940,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00003942,Saint-Pierre and Miquelon,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,INSDC:country:saint pierre and miquelon,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00003942,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Saint-Pierre and Miquelon,http://purl.obolibrary.org/obo/GAZ_00000458,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00003943,Mayotte,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,INSDC:country:mayotte,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00003943,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Mayotte,http://purl.obolibrary.org/obo/GAZ_00006923,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001541,obsolete: parent-guardian role,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,"Redundant with ""term replaced by"" entity.",,,,,,,,,,,,,,,,,,,GENEPIO:0001541,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,parent-guardian role|obsolete: parent-guardian role,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0100269,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001868,angular coordinate,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Damion Dooley's note: IAO lat/long can't be made a subclass of ""angular coordinate"" or disjoint contradiction arises with ""immaterial entity""",,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,http://purl.obolibrary.org/obo/UO_0000121,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001868,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,angular coordinate,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0524,Motswana,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0524,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Motswana,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0521,Ugandan,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0521,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Ugandan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0523,Beninese,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0523,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Beninese,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0522,Angolan,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0522,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Angolan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0529,Congolese,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0529,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Congolese,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0525,Burkinabe,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0525,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Burkinabe,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0526,Burundian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0526,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Burundian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0520,St. Helenian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0520,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,St. Helenian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0528,Comoran,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0528,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Comoran,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100707,chemical characterization data tag,chemical characterization data type|chemical characterization attribute bundle,A dataset attribute bundle which indicates the presence of chemical characterization data.,FALSE,,,,,,,chemical characterization,,,,,,,Example Guidance: Use this tag to indicate additional data is available that provides characterization information from chemical properties.,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,chemical characterization data type|chemical characterization attribute bundle,,,,GENEPIO:0100707,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-05-18T19:08:34.869Z,,,,,,,,,,,,,,,,,,,chemical characterization data tag,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A dataset attribute bundle which indicates the presence of chemical characterization data.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001486,hospital admission date,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001486,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,hospital admission date,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00003031,animal manure,,Manure which is derived from the waste products of animals.,FALSE,,,,,,,,,,,,,,"This is interesting in that the ""role"" aspect of ""waste"" is (or can be) replaced by another role ""fertilizer"". Thus, the positioning of ""manure"" under waste may not be totally correct.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00003031,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,animal manure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Manure which is derived from the waste products of animals.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001961,Restriction Digest method,,DNA fractionation using restriction enzymes.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI SRA: Restriction Digest,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001961,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Restriction Digest method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DNA fractionation using restriction enzymes.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000635,planetary landmass,land,A landmass which is part of a planet.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,land,,,,,ENVO:01000635,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,planetary landmass,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A landmass which is part of a planet.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C173767,Mitigation Strategy,Mitigation Strategy,A plan used to minimize the effects of a deleterious phenomenon.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Mitigation Strategy,,,,NCIT:C173767,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Mitigation Strategy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A plan used to minimize the effects of a deleterious phenomenon.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C173768,Self-Isolation,Self-Isolation,A method used by an individual to be kept apart in seclusion from others for a period of time in an attempt to minimize the risk of transmission of an infectious disease.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Self-Isolation,,,,NCIT:C173768,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Self-Isolation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A method used by an individual to be kept apart in seclusion from others for a period of time in an attempt to minimize the risk of transmission of an infectious disease.,,,,,,,,
http://purl.obolibrary.org/obo/ARO_3004415,direct bioautography,,A developed TLC plate is dipped into or sprayed with a microbial suspension and then incubated. Live microbial cells are visualized using tetrazolium salts.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ARO:3004415,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/aro.owl,,,,,,,,,direct bioautography,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A developed TLC plate is dipped into or sprayed with a microbial suspension and then incubated. Live microbial cells are visualized using tetrazolium salts.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C19498,Document,documentation|Document Type|Document|DOC,"A physical object, or electronic counterpart, that is characterized by containing writing which is meant to be human-readable.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,documentation|Document Type|Document|DOC,,,,NCIT:C19498,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Document,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A physical object, or electronic counterpart, that is characterized by containing writing which is meant to be human-readable.",,,,,,,,
http://purl.obolibrary.org/obo/OMIT_0008622,Therapeutic Irrigation,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OMIT:0008622,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/omit.owl,,,,,,,,,Therapeutic Irrigation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/OMIT_0006951,Gastric Lavage,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OMIT:0006951,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/omit.owl,,,,,,,,,Gastric Lavage,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000132,draft pathogenic epi case general information record,,"An epi case general info model contains datum specifications about an epidemiology investigation case including the person involved, contact information and their demographics.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000132,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,draft pathogenic epi case general information record,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"An epi case general info model contains datum specifications about an epidemiology investigation case including the person involved, contact information and their demographics.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100706,therapeutic administration history documentation tag,therapeutic administration history documentation data type,A documentation data tag which indicates the presence of data that describes a history of therapeutic administration.,FALSE,,,,,,,therapeutic administration history,,,,,,,Example Guidance: Use this tag to indicate additional data is available that provides a history of therapeutics admnistered to a subject.,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,therapeutic administration history documentation data type,,,,GENEPIO:0100706,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-05-18T19:08:34.869Z,,,,,,,,,,,,,,,,,,,therapeutic administration history documentation tag,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A documentation data tag which indicates the presence of data that describes a history of therapeutic administration.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100468,serotyping method,serotyping_method|serotyping method,A data field which describes the method used to determine the serovar.,FALSE,,,,,,,PCDS:serotyping_method,,,,,,,"PCDS: If the serovar was determined via traditional serotyping methods, put 'Traditional serotyping'. If the serovar was determined via in silico methods, provide the name and version number of the software.",,,,,,,,,,,,,,PCDS: SISTR 1.0.1,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,serotyping_method|serotyping method,serotyping method slot,,,,GENEPIO:0100468,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,serotyping method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the method used to determine the serovar.,,PCDS: The method used to determine the serovar.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002123,spoon,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,spoon,,,,,,,,,,,,,,,,,,,,,,,,,,,,Emma Griffiths,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000059,beef chuck eye steak (raw),,A raw beef chuck eye steak.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000059,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef chuck eye steak (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef chuck eye steak.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001083,drug use status,,"",FALSE,,,,,,,,,,,,,,,,,,,,,"",,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001083,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,drug use status,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"",,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_1639,Listeria monocytogenes,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,Listeria monocytogenes,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:1639,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Listeria monocytogenes,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_1637,Listeria,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,Listeria,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:1637,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Listeria,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100763,sample processing date,sample processing date,A data field which describes the date the sample was processed.,FALSE,,,,,,,PCDS:sample_processing_date,,,,,,,"PCDS: Provide the sample processed date in ISO 8601 format, i.e. 'YYYY-MM-DD'. The sample may be collected and processed (e.g. filtered, extraction) on the same day, or on different dates.",,,,,,,,,,,,,,PCDS: 2024-02-01,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,sample processing date,sample processing date slot,,,,GENEPIO:0100763,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-21T01:14:47.111Z,,,,,,,,,,,,,,,,,,,sample processing date,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the date the sample was processed.,,PCDS: The date on which the sample was processed.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100447,food packaging,animal_source_of_food|animal source of food,A data field which describes the type of packaging used to contain a food product.,FALSE,,,,,,,PCDS:food_packaging,,,,,,,"PCDS: If known, provide information regarding how the food product was packaged.",,,,,,,,,,,,,,PCDS: Plastic tray or pan [FOODON:03490126],,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,animal_source_of_food|animal source of food,animal source of food slot,,,,GENEPIO:0100447,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,food packaging,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the type of packaging used to contain a food product.,,PCDS: The type of packaging used to contain a food product.,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490357,"plastic container, according to type of plastic",,Corresponds to FSTA Thesaurus Packaging 2.2.1 'Type of plastic',FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0357,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490357,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"plastic container, according to type of plastic",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Corresponds to FSTA Thesaurus Packaging 2.2.1 'Type of plastic',,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03317170,meat (whole or pieces),,A meat product is a product organized by the form of - or processing done to - its meat component (a skeletal meat part of an animal or crustacean).,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://bioregistry.io/reference/siren:F17170,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03317170,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,meat (whole or pieces),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A meat product is a product organized by the form of - or processing done to - its meat component (a skeletal meat part of an animal or crustacean).,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000017,American HIPPA Protected Health Information (PHI) guidelines,,"The American HIPPA Protected Health Information (PHI) guidelines cover information, including demographic information, which relates to:

- the individual’s past, present, or future physical or mental health or condition,
- the provision of health care to the individual, or
- the past, present, or future payment for the provision of health care to the individual, and that identifies the individual or for which there is a reasonable basis to believe can be used to identify the individual. Protected health information includes many common identifiers (e.g., name, address, birth date, Social Security Number) when they can be associated with the health information listed above.""",FALSE,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Health_Insurance_Portability_and_Accountability_Act,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000017,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,American HIPPA Protected Health Information (PHI) guidelines,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The American HIPPA Protected Health Information (PHI) guidelines cover information, including demographic information, which relates to:

- the individual’s past, present, or future physical or mental health or condition,
- the provision of health care to the individual, or
- the past, present, or future payment for the provision of health care to the individual, and that identifies the individual or for which there is a reasonable basis to believe can be used to identify the individual. Protected health information includes many common identifiers (e.g., name, address, birth date, Social Security Number) when they can be associated with the health information listed above.""",,,,HIPPA PHI guideline,,,,
http://purl.obolibrary.org/obo/CHEBI_38313,diazines,,Any organic heterocyclic compound containing a benzene ring in which two of the C-H fragments have been replaced by isolobal nitrogens (the diazine parent structure).,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:38313,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,diazines,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any organic heterocyclic compound containing a benzene ring in which two of the C-H fragments have been replaced by isolobal nitrogens (the diazine parent structure).,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000022,beef top round roast (raw),,A raw beef top round roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000022,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef top round roast (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef top round roast.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000301,microgram per liter,ug/L|microgram per litre,A mass unit density which is equal to mass of an object in micrograms divided by the volume in liters.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ug/L|microgram per litre,,,,UO:0000301,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,microgram per liter,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A mass unit density which is equal to mass of an object in micrograms divided by the volume in liters.,,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000009,cartesian coordinate system,,"A Cartesian coordinate system is a coordinate system that specifies each point uniquely in a plane by a pair of numerical coordinates, which are the signed distances from the point to two fixed perpendicular directed lines, measured in the same unit of length.",FALSE,,,,,,,,,,,,,,,,,,,,,http://en.wikipedia.org/wiki/Cartesian_coordinate_system,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000009,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,cartesian coordinate system,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra|Orlaith Burke|Alejandra Gonzalez-Beltran,,,,"A Cartesian coordinate system is a coordinate system that specifies each point uniquely in a plane by a pair of numerical coordinates, which are the signed distances from the point to two fixed perpendicular directed lines, measured in the same unit of length.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000072,sequencing workflow,,A lab sequencing datum which describes a pre-defined sequence of steps to run the automated sequencing pipeline.,FALSE,,,,,,,,,,,,,,,,,,,,,GROUP: IRIDA Ontology (Emma),,,,,,,"Resequencing, FastQ only",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000072,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,,,,,,,sequencing workflow,,,,,Sequencing,,,,,,,,,,,,,,,,,,,,,,Workflow,,,Derived from Sample Sheet,,A lab sequencing datum which describes a pre-defined sequence of steps to run the automated sequencing pipeline.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001770,6 - finished,,"Finished: which describes un-gapped complete sequences that have minimal errors, if any. The biology of the microbe will determine whether this finished genome consists of more than one chromosome.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001770,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,6 - finished,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"Finished: which describes un-gapped complete sequences that have minimal errors, if any. The biology of the microbe will determine whether this finished genome consists of more than one chromosome.",,,,,,,,
http://purl.obolibrary.org/obo/HP_0002625,Deep venous thrombosis,Multiple deep venous thrombosis|Deep vein thrombosis|Blood clot in a deep vein,"Formation of a blot clot in a deep vein. The clot often blocks blood flow, causing swelling and pain. The deep veins of the leg are most often affected.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0149871|SNOMEDCT_US:128053003,,,,,,,,,,,,,,,,,,,,,,,,,Multiple deep venous thrombosis|Deep vein thrombosis|Blood clot in a deep vein,,,,HP:0002625,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Deep venous thrombosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Formation of a blot clot in a deep vein. The clot often blocks blood flow, causing swelling and pain. The deep veins of the leg are most often affected.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001662,in process,undetermined,"A categorical choice recorded while the data for a given measurable datum has not finished being collected, is awaiting a conclusion, or has not yet been communicated.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,undetermined,,,,GENEPIO:0001662,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,in process,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"A categorical choice recorded while the data for a given measurable datum has not finished being collected, is awaiting a conclusion, or has not yet been communicated.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470143,drying under normal pressure,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0143,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470143,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,drying under normal pressure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002089,draft sequence repository data - virulence,,"The virulence factors determined to be present in the sequenced isolate by phenotypic or target amplification methods e.g. Shiga toxins, hemolysins.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002089,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,draft sequence repository data - virulence,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"The virulence factors determined to be present in the sequenced isolate by phenotypic or target amplification methods e.g. Shiga toxins, hemolysins.",,,"order:
GENEPIO:0002130 # Virulence factor name
GENEPIO:0002131 # Virulence testing protocol
GENEPIO:0002132 # detection limit",,,,,
http://purl.obolibrary.org/obo/CHEBI_33575,carboxylic acid,,"A carbon oxoacid acid carrying at least one ‒C(=O)OH group and having the structure RC(=O)OH, where R is any any monovalent functional group. Carboxylic acids are the most common type of organic acid.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:23027|CHEBI:13627|CHEBI:13428,,,,,,CHEBI:33575,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,carboxylic acid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A carbon oxoacid acid carrying at least one ‒C(=O)OH group and having the structure RC(=O)OH, where R is any any monovalent functional group. Carboxylic acids are the most common type of organic acid.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001017,obsolete: bakery,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001017,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: bakery,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ENVO_00003864,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_543,Enterobacteriaceae,,,FALSE,,,,,,,enterobacteria,,,,,,,,,,,,,,,,,,,Enterobacteriaceae,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:543,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Enterobacteriaceae,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00002470,food material characteristic,,A physical object quality which describes a characteristic of some food material.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00002470,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food material characteristic,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A physical object quality which describes a characteristic of some food material.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002141,latitude and longitude coordinate (NCBI BioSample format),,"The geographical coordinates of the location where the sample was collected. Specify as degrees latitude and longitude in format ""d[d.dddd] N|S d[dd.dddd] W|E"", eg, 38.98 N 77.11 W",FALSE,,,,,,,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/biosample/docs/attributes/,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002141,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,latitude and longitude coordinate (NCBI BioSample format),,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"The geographical coordinates of the location where the sample was collected. Specify as degrees latitude and longitude in format ""d[d.dddd] N|S d[dd.dddd] W|E"", eg, 38.98 N 77.11 W",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490384,amin resin container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0384,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490384,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,amin resin container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_33273,polyatomic anion,,An anion consisting of more than one atom.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:33273,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,polyatomic anion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An anion consisting of more than one atom.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0002878,Respiratory failure,Respiratory failure,A severe form of respiratory insufficiency characterized by inadequate gas exchange such that the levels of oxygen or carbon dioxide cannot be maintained within normal limits.,FALSE,,,,,,,,,,,,,,"Respiratory failure is classified as type 1 with hypoxemia (arterial partial pressure of oxygen less than 60 mmHg) without hypercapnea, and type 2 with hypoxemia in the present of hypercapnea (partial pressure of carbon dioxide over 50 mmHg).",,,,,,,,,,,,,,,,,,UMLS:C1145670|SNOMEDCT_US:409622000,,,,,,,,,,,,,,,,,,,,,,,HP:0004877,,Respiratory failure,,,,HP:0002878,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Respiratory failure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A severe form of respiratory insufficiency characterized by inadequate gas exchange such that the levels of oxygen or carbon dioxide cannot be maintained within normal limits.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_3118,hepatobiliary disease,,A gastrointestinal system disease that is located_in the liver and/or biliary tract.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:3118,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,hepatobiliary disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A gastrointestinal system disease that is located_in the liver and/or biliary tract.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000056,Stx1 Toxin PCR result,,A qPCR measurement result of Stx1 gene amplification.,FALSE,,,,,,,,,,,,,,,,,,,,,GROUP: IRIDA Ontology (Emma),,,,,,,CT value?,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000056,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,http://purl.obolibrary.org/obo/OMIT_0020917,,,,,,Stx1 Toxin PCR result,,,,,Lab Analytic,,,,,,,,,,,,,,,,,,,,,,Stx1 Toxin PCR result,,,NML Labware LIMS,,A qPCR measurement result of Stx1 gene amplification.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001096,date last seen alive,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001096,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,date last seen alive,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The 'date last seen alive' is the date that a subject (patient) was last known (seen, heard, messaged) to be alive.|Damion Dooley",,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00010365,"populated place, Yemen",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00010365,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Yemen",http://purl.obolibrary.org/obo/GAZ_00005284,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C19239,"Infant Mortality, AIDS","Infant Mortality, AIDS|AIDS, Infant Mortality",infant death due to AIDS,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Infant Mortality, AIDS|AIDS, Infant Mortality",,,,NCIT:C19239,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,"Infant Mortality, AIDS",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,infant death due to AIDS,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0016382,prescapular lymph node,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCIT:C77654|MA:0003069|EMAPA:37723,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0016382,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,prescapular lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0016386,paraaortic lymph node,para-aortic lymph node|lateral aortic node|lateral aortic lymph node,"The paraaortic lymph nodes (also known as para-aortic, periaortic, and peri-aortic) are a group of lymph nodes that lie in front of the lumbar vertebral bodies near the aorta. These lymph nodes receive drainage from the lower gastrointestinal tract and the pelvic organs.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Paraaortic_lymph_node|NCIT:C77643|MA:0003073|FMA:16604,,,,,,,,,,,,,,,,,,,,,,,,,para-aortic lymph node|lateral aortic node|lateral aortic lymph node,,,,UBERON:0016386,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,paraaortic lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The paraaortic lymph nodes (also known as para-aortic, periaortic, and peri-aortic) are a group of lymph nodes that lie in front of the lumbar vertebral bodies near the aorta. These lymph nodes receive drainage from the lower gastrointestinal tract and the pelvic organs.",,,,,,,,
http://purl.obolibrary.org/obo/OBA_2001008,age of onset of osteoarthritis,age osteoarthritis symptoms begin|age at onset of osteoarthritis,The age at which osteoarthritis manifestations first appear.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,age osteoarthritis symptoms begin|age at onset of osteoarthritis,,,,OBA:2001008,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age of onset of osteoarthritis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The age at which osteoarthritis manifestations first appear.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000304,pork sirloin roast,,A pork roast that is derived from the whole loin. The Sirloin is the last 5 to 7 inches of the posterior end of the Loin. The Sirloin Roast comes after but is adjacent to the posterior end of the Center Cut Loin.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000304,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pork sirloin roast,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A pork roast that is derived from the whole loin. The Sirloin is the last 5 to 7 inches of the posterior end of the Loin. The Sirloin Roast comes after but is adjacent to the posterior end of the Center Cut Loin.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_25106,macrolide,,A macrocyclic lactone with a ring of twelve or more members derived from a polyketide.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:25106,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,macrolide,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A macrocyclic lactone with a ring of twelve or more members derived from a polyketide.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0600014,material component separation,,a material processing in which components of an input material become segregated in space,FALSE,,,,,,,,,,,,,,,,,,,,,IEDB,,,,,material component separation,,"Using a cell sorter to separate a mixture of T cells into two fractions; one with surface receptor CD8 and the other lacking the receptor, or purification",,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/BFO_0000040,http://purl.obolibrary.org/obo/BFO_0000040,,,,,,,,,,OBI:0600014,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,material component separation,,,,,,,,,,,,,,,,,,,,,,,,,,,,Bjoern Peters,,,,a material processing in which components of an input material become segregated in space,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C1636,Therapeutic Steroid Hormone,steroid drug|Therapeutic Steroid Hormone|Synthetic Steroids|Steroid Hormone,"Synthetically made hormones possessing the steroid ring system; e.g., androgens, estrogens, and adrenocortical hormones.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,steroid drug|Therapeutic Steroid Hormone|Synthetic Steroids|Steroid Hormone,,,,NCIT:C1636,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Therapeutic Steroid Hormone,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Synthetically made hormones possessing the steroid ring system; e.g., androgens, estrogens, and adrenocortical hormones.",,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00005491,"populated place, Nepal",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00005491,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Nepal",http://purl.obolibrary.org/obo/GAZ_00004399,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490201,vial,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0201,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490201,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,vial,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510149,no or reduced cholesterol claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0149,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510149,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,no or reduced cholesterol claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HP_0002371,Loss of speech,Loss of speech,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0542223,,,,,,,,,,,,,,,,,,,,,,,,,Loss of speech,,,,HP:0002371,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Loss of speech,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510094,no starch added claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0094,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510094,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,no starch added claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0000703,Illumina Genome Analyzer II,,is a DNA sequence which is manufactured by Illumina (Solexa) corporation. it support sequencing of single or paired end clone libraries relying on sequencing by synthesis technology,FALSE,,,,,,,,,,,,,,,,,,,,,Illumina Corporation,,,,,Illumina Genome Analyzer II,,"PMID: 19336255. RNA-Seq-quantitative measurement of expression through massively parallel RNA-sequencing. Wilhelm BT, Landry JR.Methods. 2009 Jul;48(3):249-57.",,,http://purl.obolibrary.org/obo/IAO_0000120,NCBI SRA: Illumina Genome Analyzer II,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0000703,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Illumina Genome Analyzer II,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra,,,,is a DNA sequence which is manufactured by Illumina (Solexa) corporation. it support sequencing of single or paired end clone libraries relying on sequencing by synthesis technology,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00007292,"populated place, Bhutan",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00007292,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Bhutan",http://purl.obolibrary.org/obo/GAZ_00003920,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ARO_3004402,Sensitire,,"Specific automated system of analysis for determining antimicrobial susceptibility developed by Trek, Thermo Fisher Scientific.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ARO:3004402,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/aro.owl,,,,,,,,,Sensitire,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Specific automated system of analysis for determining antimicrobial susceptibility developed by Trek, Thermo Fisher Scientific.",,,,,,,,
http://purl.obolibrary.org/obo/PCO_0000039,baby shower,,A human social gathering at which the key participant is an expectant parent and other guests bring presents for the soon to be born baby.,FALSE,,,,,,,,,,,,,,,,,,,,,GenEpiO curators,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PCO:0000039,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/pco.owl,,,,,,,,,baby shower,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A human social gathering at which the key participant is an expectant parent and other guests bring presents for the soon to be born baby.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000158,beef culotte steak (raw),,A raw beef culotte steak.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000158,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef culotte steak (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef culotte steak.,,,,,,,,
http://purl.obolibrary.org/obo/PATO_0001986,dissolved,,A quality inhering in a bearer by virtue of the bearer's passing into solution.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PATO:0001986,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/pato.owl,http://purl.oboInOwllibrary.org/oboInOwl/pato#value_slim|http://purl.oboInOwllibrary.org/oboInOwl/pato#relational_slim,,,,,,,,dissolved,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A quality inhering in a bearer by virtue of the bearer's passing into solution.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0000136,incubator,,"A device in which environmental conditions (light, photoperiod, temperature, humidity, etc.) can be controlled",FALSE,,,,,,,,,,,,,,,,,,,,,http://www.medterms.com/script/main/art.asp?articlekey=18426,,,,,incubator,,"Incubators are used in microbiology for culturing (growing) bacteria and other microorganisms. Incubators in tissue culture rooms are used for culturing stem cells, lymphocytes, skin fibroblasts and other types of cells",,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0000136,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,incubator,,,,,,,,,,,,,,,,,,,,,,,,,,,,Frank Gibson,,,,"A device in which environmental conditions (light, photoperiod, temperature, humidity, etc.) can be controlled",,,,,,,,
http://purl.obolibrary.org/obo/DOID_10567,late yaws,,"A yaws that appears after five years of the initial infection and is characterized by disabling consequences of the nose, bones and palmar/plantar hyperkeratosis.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:10567,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,late yaws,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A yaws that appears after five years of the initial infection and is characterized by disabling consequences of the nose, bones and palmar/plantar hyperkeratosis.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_10568,early yaws,,"A yaws that results in initial papule at the site of entry of bacteria. Without treatment, this is followed by disseminated skin lesions over the body. Bone pain and bone lesions may also occur.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:10568,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,early yaws,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A yaws that results in initial papule at the site of entry of bacteria. Without treatment, this is followed by disseminated skin lesions over the body. Bone pain and bone lesions may also occur.",,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00003040,animal house,,A house used for sheltering non-human animals.,FALSE,,,,,,,,,,,,,,"While humans are animals, this class does not refer to human houses.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00003040,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,animal house,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A house used for sheltering non-human animals.,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0005139,morbid obesity,,"An excess of body weight, normally defined as an individual with a body mass index greater than 35 or a body weight greater than one hundred percent of ideal body weight.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0028756|SCTID:83911000119104|MESH:D009767|MEDGEN:18128|ICD9:278.01|EFO:0001074|DOID:11981,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MONDO:0005139,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,morbid obesity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An excess of body weight, normally defined as an individual with a body mass index greater than 35 or a body weight greater than one hundred percent of ideal body weight.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_23697,dichlorobenzene,,Any member of the class of chlorobenzenes carrying two chloro groups at unspecified positions.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:23697,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,dichlorobenzene,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any member of the class of chlorobenzenes carrying two chloro groups at unspecified positions.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100819,fecal coliform count unit,fecal coliform count unit|faecal coliform count unit,An environmental data field which describes the units of a measurement of fecal coliforms.,FALSE,,,,,,,PCDS:fecal_coliform_count_unit,,,,,,,PCDS: Provide the units of the measured fecal coliforms.,,,,,,,,,,,,,,PCDS: most probable number per milliliter (MPN/mL),,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,fecal coliform count unit|faecal coliform count unit,fecal coliform count unit slot|faecal coliform count unit slot,,,,GENEPIO:0100819,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,fecal coliform count unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the units of a measurement of fecal coliforms.,,PCDS: The units of a measurement of fecal coliforms.,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530121,"cut of meat, french",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0121,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530121,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"cut of meat, french",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490398,polyethylene (high density) - polypropylene container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0398,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490398,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,polyethylene (high density) - polypropylene container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001006,greater than,,"The ""greater than"" comparator indicates that a given substance was present at greater than a given quantity or concentration.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,>,,,,,,GENEPIO:0001006,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,greater than,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"The ""greater than"" comparator indicates that a given substance was present at greater than a given quantity or concentration.",,,,>,,,,
http://purl.obolibrary.org/obo/NCBITaxon_46456,Mus musculus wagneri,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,Mus musculus wagneri,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:46456,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Mus musculus wagneri,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02021382,veal roast (raw),,A raw veal roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02021382,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,veal roast (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw veal roast.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100844,genome completeness,genome completeness,A data field which describes the percentage of expected genes identified in the genome being sequenced.,FALSE,,,,,,,PCDS:genome_completeness,,,,,,,PCDS: Provide the genome completeness as a percent (no need to include units).,,,,,,,,,,,,,,PCDS: 85,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,genome completeness,genome completeness slot,,,,GENEPIO:0100844,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,genome completeness,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the percentage of expected genes identified in the genome being sequenced.,,PCDS: The percentage of expected genes identified in the genome being sequenced. Missing genes indicate missing genomic regions (incompleteness) in the data.,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490175,"aluminum can, drum or barrel",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0175,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490175,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"aluminum can, drum or barrel",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001636,animal body product,,"A product of an animal, as in blood, feces, sputum, etc. that has no particular anatomical site",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001636,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,animal body product,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/COB_0000022,,,,,,,,Damion Dooley,,,,"A product of an animal, as in blood, feces, sputum, etc. that has no particular anatomical site",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100433,presampling activity,presampling_activity|presampling activity,A data field which describes the activities or variables introduced upstream of sample collection that may affect the sample collected.,FALSE,,,,,,,PCDS:presampling_activity,,,,,,,"PCDS: If there was an activity that would affect the sample prior to collection (this is different than sample processing), provide the activities by selecting one or more values from the template pick list. If the information is unknown or cannot be provided, leave blank or provide a null value.",,,,,,,,,,,,,,PCDS: Vaccination,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,presampling_activity|presampling activity,presampling activity slot,,,,GENEPIO:0100433,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,presampling activity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the activities or variables introduced upstream of sample collection that may affect the sample collected.,,PCDS: The upstream activities or variables that may affect the sample collected.,,,,,,
http://purl.obolibrary.org/obo/UBERON_0012311,deep anterior cervical lymph node,,The deep anterior cervical lymph nodes are found near the middle cricothyroid ligament and the trachea.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Deep_anterior_cervical_lymph_nodes|SCTID:52363008|FMA:12779,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0012311,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,deep anterior cervical lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The deep anterior cervical lymph nodes are found near the middle cricothyroid ligament and the trachea.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0012310,deep lateral cervical lymph node,deep lateral cervical node,"The deep lateral cervical lymph nodes are found near the upper part of the internal jugular vein in the neck, lateral or posterior to the carotid sheath.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Deep_lateral_cervical_lymph_nodes|SCTID:61755005|FMA:12770,,,,,,,,,,,,,,,,,,,,,,,,,deep lateral cervical node,,,,UBERON:0012310,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,deep lateral cervical lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The deep lateral cervical lymph nodes are found near the upper part of the internal jugular vein in the neck, lateral or posterior to the carotid sheath.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00004470,beef primal cut,,A cut of beef that is initially separated from the carcass of a{n} {organism} during butchering.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00004470,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef primal cut,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A cut of beef that is initially separated from the carcass of a{n} {organism} during butchering.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490274,"glass container, uncoloured, light weight",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0274,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490274,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"glass container, uncoloured, light weight",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000055,beef chuck eye roll (raw),,A raw beef chuck eye roll cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000055,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef chuck eye roll (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef chuck eye roll cut.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C113419,Housemate,Roommate|Housemate,A person who shares a house with another person.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Roommate|Housemate,,,,NCIT:C113419,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Housemate,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A person who shares a house with another person.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_36807,hydrochloride,,A salt formally resulting from the reaction of hydrochloric acid with an organic base.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:36807,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,hydrochloride,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A salt formally resulting from the reaction of hydrochloric acid with an organic base.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00002018,sewage,,"Wastewater that is contaminated with feces or urine,",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Sewage|SWEETRealm:Sewage,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00002018,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,sewage,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Wastewater that is contaminated with feces or urine,",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100725,antimicrobial resistance (AMR) phenotypic testing characterization tag,antimicrobial resistance phenotypic testing data type|AMR phenotypic testing tag|AMR phenotypic testing data type,A phenotypic microbiological characterization data tag which indicates the presence of antimicrobial resistance (AMR) phenotypic testing characterization data.,FALSE,,,,,,,AMR phenotypic testing,,,,,,,Example Guidance: Use this tag to indicate additional data is available that provides phenotypic characterization using AMR testing.,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,antimicrobial resistance phenotypic testing data type|AMR phenotypic testing tag|AMR phenotypic testing data type,,,,GENEPIO:0100725,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-05-18T19:08:34.869Z,,,,,,,,,,,,,,,,,,,antimicrobial resistance (AMR) phenotypic testing characterization tag,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A phenotypic microbiological characterization data tag which indicates the presence of antimicrobial resistance (AMR) phenotypic testing characterization data.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490161,"aluminum tray or pan, cardboard cover",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0161,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490161,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"aluminum tray or pan, cardboard cover",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HP_0032263,Increased blood pressure,Increased BP,"Abnormal increase in blood pressure. An individual measurement of increased blood pressure does not necessarily imply hypertension. In practical terms, multiple measurements are recommended to diagnose the presence of hypertension.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Increased BP,,,,HP:0032263,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Increased blood pressure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Abnormal increase in blood pressure. An individual measurement of increased blood pressure does not necessarily imply hypertension. In practical terms, multiple measurements are recommended to diagnose the presence of hypertension.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000174,beef sirloin bavette steak (raw),,A raw beef sirloin bavette steak.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000174,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef sirloin bavette steak (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef sirloin bavette steak.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000102,beef blade chuck roast (raw),,A raw beef blade chuck roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000102,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef blade chuck roast (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef blade chuck roast.,,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000545,narrow sense heritability,,"A particularly important component of the genetic variance is the additive variance, Var(A), which is the variance due to the average effects (additive effects) of the alleles. Since each parent passes a single allele per locus to each offspring, parent-offspring resemblance depends upon the average effect of single alleles. Additive variance represents, therefore, the genetic component of variance responsible for parent-offspring resemblance. The additive genetic portion of the phenotypic variance is known as Narrow-sense heritability and is defined as:

 h2 = Var(A)/Var(P)",FALSE,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Heritability,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000545,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,narrow sense heritability,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra,,,,"A particularly important component of the genetic variance is the additive variance, Var(A), which is the variance due to the average effects (additive effects) of the alleles. Since each parent passes a single allele per locus to each offspring, parent-offspring resemblance depends upon the average effect of single alleles. Additive variance represents, therefore, the genetic component of variance responsible for parent-offspring resemblance. The additive genetic portion of the phenotypic variance is known as Narrow-sense heritability and is defined as:

 h2 = Var(A)/Var(P)",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002176,duration specification,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/UO_0000003,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002176,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,duration specification,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000170,beef petite sirloin roast (raw),,A raw beef petite sirloin roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000170,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef petite sirloin roast (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef petite sirloin roast.,,,,,,,,
http://purl.obolibrary.org/obo/IAO_0020000,identifier,,An information content entity that is the outcome of a dubbing process and is used to refer to one instance of entity shared by a group of people to refer to that individual entity.,FALSE,,,,,,,,,,,,,,"Sep 29, 2016: The current definition has been amended from the previous version: ""A proper name is an information content entity that is the outcome of a dubbing process and is used to refer to one instance of entity shared by a group of people to refer to that individual entity."" to more accuratly reflect the necessary and sufficient condition on the class. (MB)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,IAO:0020000,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/obib.owl,,,,,,,,,identifier,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An information content entity that is the outcome of a dubbing process and is used to refer to one instance of entity shared by a group of people to refer to that individual entity.,,,,,,,,
http://purl.obolibrary.org/obo/GO_0032991,protein-containing complex,,"A stable assembly of two or more macromolecules, i.e. proteins, nucleic acids, carbohydrates or lipids, in which at least one component is a protein and the constituent parts function together.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GO:0032991,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/cob.owl,,,,,,,,,protein-containing complex,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A stable assembly of two or more macromolecules, i.e. proteins, nucleic acids, carbohydrates or lipids, in which at least one component is a protein and the constituent parts function together.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C19332,personal attribute,Subject Characteristics|Personal Attribute|Personal,The distinguishing qualities or prominent aspects of an individual person.|The distinguishing qualities or prominent aspects of an individual person.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Subject Characteristics|Personal Attribute|Personal,,,,NCIT:C19332,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl|http://purl.obolibrary.org/obo/gsso.owl,,,,,,,,,personal attribute|Personal Attribute,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The distinguishing qualities or prominent aspects of an individual person.|The distinguishing qualities or prominent aspects of an individual person.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_600103,daptomycin,,"A polypeptide comprising <em>N</em>-decanoyltryptophan, asparagine, aspartic acid, threonine, glycine, ornithine, aspartic acid, <small>D</small>-alanine, aspartic acid, glycine, <small>D</small>-serine, <em>threo</em>-3-methylglutamic acid and 3-anthraniloylalanine (also known as kynurinine) coupled in sequence and lactonised by condensation of the carboxylic acid group of the 3-anthraniloylalanine  with the alcohol group of the threonine residue.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:478255|CHEBI:478132|CHEBI:321017|CHEBI:29570,,,,,,CHEBI:600103,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,daptomycin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A polypeptide comprising <em>N</em>-decanoyltryptophan, asparagine, aspartic acid, threonine, glycine, ornithine, aspartic acid, <small>D</small>-alanine, aspartic acid, glycine, <small>D</small>-serine, <em>threo</em>-3-methylglutamic acid and 3-anthraniloylalanine (also known as kynurinine) coupled in sequence and lactonised by condensation of the carboxylic acid group of the 3-anthraniloylalanine  with the alcohol group of the threonine residue.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00002715,herring fillet,,A herring fillet is a fillet cut of herring,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00002715,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,herring fillet,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A herring fillet is a fillet cut of herring,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000349,veal top round (raw),,A raw veal top round cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000349,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,veal top round (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw veal top round cut.,,,,,,,,
http://purl.obolibrary.org/obo/OBA_2001022,age of onset of frontotemporal dementia,age frontotemporal dementia symptoms begin|age at onset of frontotemporal dementia,The age at which frontotemporal dementia manifestations first appear.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,age frontotemporal dementia symptoms begin|age at onset of frontotemporal dementia,,,,OBA:2001022,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age of onset of frontotemporal dementia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The age at which frontotemporal dementia manifestations first appear.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038900,inferior tracheobronchial lymph node,nodus tracheobronchialis inferioris lymphaticus|carinate lymph node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:5962,,,,,,,,,,,,,,,,,,,,,,,,,nodus tracheobronchialis inferioris lymphaticus|carinate lymph node,,,,UBERON:0038900,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,inferior tracheobronchial lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0101017,specimen control role,,A specimen that has a role of establishing a baseline for an experiment.,FALSE,,,,,,,control sample,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Scientific_control,,,,,,,,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0101017,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-11-20T16:24:25Z,,,,,,,,,,,,,,,,,,,specimen control role,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A specimen that has a role of establishing a baseline for an experiment.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0032556,Circumoral cyanosis,Bluish around mouth,Persistent blue color of the skin that surrounds the mouth.,FALSE,,,,,,,,,,,,,,Circumoral cyanosis may be a sign of peripheral or of central cyanosis.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Bluish around mouth,,,,HP:0032556,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Circumoral cyanosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Persistent blue color of the skin that surrounds the mouth.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002040,antibiotic resistance not defined,,"A not defined resistance indicates that an isolate was not tested against a given antibiotic, or the result of the test was inconclusive.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Damion Dooley note: Is this the same as ""indeterminate""?",,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,ND|N,,,,,,GENEPIO:0002040,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,antibiotic resistance not defined,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"A not defined resistance indicates that an isolate was not tested against a given antibiotic, or the result of the test was inconclusive.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000464,beef sub-primal cut (raw),,A raw beef sub-primal cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000464,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef sub-primal cut (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef sub-primal cut.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0004539,right kidney,,A kidney that is part of a right side of organism [Automatically generated definition].,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0227613|SCTID:362208000|NCIT:C34005|MA:0001683|FMA:7204|EMAPA:36590,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0004539,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,right kidney,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A kidney that is part of a right side of organism [Automatically generated definition].,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0004538,left kidney,,A kidney that is part of a left side of organism [Automatically generated definition].,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0227614|SCTID:362209008|NCIT:C34006|MA:0001655|FMA:7205|EMAPA:36589,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0004538,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,left kidney,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A kidney that is part of a left side of organism [Automatically generated definition].,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_59792,thioacetal,,"The sulfur analogue of 'acetal'.  The term includes monothioacetals having the structure R<small><sub>2</sub></small>C(OR')(SR') (subclass monothioketals, R ≠ H); and dithioacetals having the structure R<small><sub>2</sub></small>C(SR')<small><sub>2</sub></small> (subclass dithioketals, R ≠ H, R' ≠ H).",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:59792,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,thioacetal,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The sulfur analogue of 'acetal'.  The term includes monothioacetals having the structure R<small><sub>2</sub></small>C(OR')(SR') (subclass monothioketals, R ≠ H); and dithioacetals having the structure R<small><sub>2</sub></small>C(SR')<small><sub>2</sub></small> (subclass dithioketals, R ≠ H, R' ≠ H).",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001793,data aggregated,,"The 'data aggregated' role between a user and given data entails that the user is authorized to see aggregated results (like the patient count) via preset reports, queries or views.  The results are not obfuscated.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001793,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,data aggregated,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"The 'data aggregated' role between a user and given data entails that the user is authorized to see aggregated results (like the patient count) via preset reports, queries or views.  The results are not obfuscated.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001641,identifier model,,"An identifier moe3l indicates an identifier, the organization it has been issued by, and the status of the identifier - whether it is a primary one, active or archaic.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001641,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,identifier model,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"An identifier moe3l indicates an identifier, the organization it has been issued by, and the status of the identifier - whether it is a primary one, active or archaic.",,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01001206,grassland ecosystem,grassland|GRASSLAND,An ecosystem in which grasses (Graminae) are the dominant form of vegetation and determine the system's structure and dynamics.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,TGN:54052|TGN:21604|LTER:232|Geonames:V.GRSLD|FTT:766|FTT:760|FTT:259|EcoLexicon:grassland,,,,,,,,,,,,,,,,,,,,,,,,,grassland|GRASSLAND,,,,ENVO:01001206,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,grassland ecosystem,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An ecosystem in which grasses (Graminae) are the dominant form of vegetation and determine the system's structure and dynamics.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02010027,piece of animal (raw),,A raw piece of animal.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02010027,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of animal (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw piece of animal.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C71392,Legal Relative,Legal Relative|Legal Relation,Family members related by secondary marriage or other legal arrangement.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Legal Relative|Legal Relation,,,,NCIT:C71392,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Legal Relative,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Family members related by secondary marriage or other legal arrangement.,,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000610,measure of association,,measure of association is a statistic which quantitatively represents a relationship between two or more variables,FALSE,,,,,,,,,,,,,,,,,,,,,COKA group,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000610,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,measure of association,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Brian S. Alper, Joanne Dehnbostel, Kenneth Wilkins, Muhammad Afzal, Neeraj Ojha",,,,measure of association is a statistic which quantitatively represents a relationship between two or more variables,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00002682,pet food,,Pet food is plant or animal material intended for consumption by pets.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00002682,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pet food,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Pet food is plant or animal material intended for consumption by pets.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001560,reference genome size,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/UO_0000244,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001560,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,http://purl.obolibrary.org/obo/SO_0001505,,,,,,reference genome size,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00003872,ground sirloin,,A meat made up from the beef cut is known as sirloin. Ground sirloin is ground sirloin meat.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00003872,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,ground sirloin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A meat made up from the beef cut is known as sirloin. Ground sirloin is ground sirloin meat.,,,,,,,,
http://purl.obolibrary.org/obo/UO_1000084,gram per cubic centimeter based unit,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:1000084,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,gram per cubic centimeter based unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UO_1000089,cubic meter per mole based unit,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:1000089,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,cubic meter per mole based unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100081,liver transplant,,An individual who is receiving or has received a transplant of a liver.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100081,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,liver transplant,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An individual who is receiving or has received a transplant of a liver.,,,,,,,,
http://purl.obolibrary.org/obo/OBA_2001011,age of onset of schizophrenia,age schizophrenia symptoms begin|age at onset of schizophrenia,The age at which schizophrenia manifestations first appear.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,age schizophrenia symptoms begin|age at onset of schizophrenia,,,,OBA:2001011,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age of onset of schizophrenia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The age at which schizophrenia manifestations first appear.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_6827,methicillin,,"A penicillin that is 6-aminopenicillanic acid in which one of the amino hydrogens is replaced by a 2,6-dimethoxybenzoyl group.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:6827,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,methicillin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A penicillin that is 6-aminopenicillanic acid in which one of the amino hydrogens is replaced by a 2,6-dimethoxybenzoyl group.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C27993,General Qualifier,General Qualifiers|General Qualifier|General Modifier,A term that helps define and render another concept unique.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,General Qualifiers|General Qualifier|General Modifier,,,,NCIT:C27993,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,General Qualifier,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A term that helps define and render another concept unique.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C45908,Intersex,Intersexed|Intersex|INTERSEX,"Refers to an individual who was born with genitalia and/or secondary sexual characteristics of indeterminate sex, or which combine features of both sexes.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Intersexed|Intersex|INTERSEX,,,,NCIT:C45908,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Intersex,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Refers to an individual who was born with genitalia and/or secondary sexual characteristics of indeterminate sex, or which combine features of both sexes.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470103,food salting,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0103,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470103,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food salting,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://semanticscience.org/resource/SIO_000507,point,,A point is a geometric entity that is located in a zero-dimensional spatial region and whose position is defined by its coordinates in some coordinate system.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,resource:SIO_000507,,,,,,,,,,,,,,,,,,,,,,,,http://semanticscience.org/ontology/sio.owl,,,,,,,,,point,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A point is a geometric entity that is located in a zero-dimensional spatial region and whose position is defined by its coordinates in some coordinate system.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0001899,target capture specification,,"A plan specification which specifies how the material enrichment procedure will influence the scale, or type of material that will be assayed in the specimen.",FALSE,,,,,,,,,,,,,,,,,,,,,NIAID GSCID-BRC metadata working group,,,,,target capture specification,,"Some examples of target capture are Whole, CloneEnds, Exome, TargetedLocusLoci, RandomSurvey",,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0001899,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,target capture specification,,,,,,,Target Capture,,,,,,,,,,,,,,,,,,,,,"PERSON: Chris Stoeckert, Jie Zheng",,,,"A plan specification which specifies how the material enrichment procedure will influence the scale, or type of material that will be assayed in the specimen.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490372,"low density polyethylene container, treated",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0372,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490372,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"low density polyethylene container, treated",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/OBA_2051964,age of onset of isolated dystonia,age isolated dystonia symptoms begin|age at onset of isolated dystonia,The age at which isolated dystonia manifestations first appear.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,age isolated dystonia symptoms begin|age at onset of isolated dystonia,,,,OBA:2051964,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age of onset of isolated dystonia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The age at which isolated dystonia manifestations first appear.,,,,,,,,
http://www.ebi.ac.uk/efo/EFO_0004703,age at menarche,,"The age of onset of (human) menarche, the beginning of the first menstrual cycle in an individual",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SNOMEDCT:398700009|NCIt:C19666,,,,,,,,,,,,,,,,,,,,,,,,,,,,,efo:EFO_0004703,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age at menarche,,,,,,,,,,,,,,,,,,,,,,,,,,,,Helen Parkinson,,,,"The age of onset of (human) menarche, the beginning of the first menstrual cycle in an individual",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03460102,proteolytic fermentation,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=H0102,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03460102,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,proteolytic fermentation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ARO_3004300,intermediate antimicrobial phenotype,,Intermediate sensitivity of a bacterial strain to a given antibiotic occurs when it is inhibited by a concentration of the drug that is associated with uncertain therapeutic effect. The elimination of intermediate phenotype bacteria may depend on the site of infection and/or the concentration of the administered drug. Definition from https://clsi.org.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,I,,,,,,ARO:3004300,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/aro.owl,,,,,,,,,intermediate antimicrobial phenotype,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Intermediate sensitivity of a bacterial strain to a given antibiotic occurs when it is inhibited by a concentration of the drug that is associated with uncertain therapeutic effect. The elimination of intermediate phenotype bacteria may depend on the site of infection and/or the concentration of the administered drug. Definition from https://clsi.org.,,,,intermediate,,,,
http://purl.obolibrary.org/obo/FOODON_03530293,shank (meat),,"A meat shank or shin is the portion of meat around the tibia of the animal, the leg bone beneath the knee. [http://en.wikipedia.org/wiki/Shank_(meat)]",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0293,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530293,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,shank (meat),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A meat shank or shin is the portion of meat around the tibia of the animal, the leg bone beneath the knee. [http://en.wikipedia.org/wiki/Shank_(meat)]",,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000189,Berber Western,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000189,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Berber Western,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000185,Semite Northern,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000185,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Semite Northern,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000183,Khoisan Eastern,,A Eastern African population with a population size of 0.4 million,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000183,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Khoisan Eastern,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Eastern African population with a population size of 0.4 million,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000188,Eastern African,,People living in: Burundi OR Comoros OR Djibouti OR Eritrea OR Ethiopia OR Kenya OR Madagascar OR Malawi OR Mauritius OR Mayotte OR Mozambique OR Rwanda OR Réunion OR Seychelles OR Somalia OR South Sudan OR Sudan OR Uganda OR United Republic of Tanzania OR Zimbabwe,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000188,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Eastern African,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,People living in: Burundi OR Comoros OR Djibouti OR Eritrea OR Ethiopia OR Kenya OR Madagascar OR Malawi OR Mauritius OR Mayotte OR Mozambique OR Rwanda OR Réunion OR Seychelles OR Somalia OR South Sudan OR Sudan OR Uganda OR United Republic of Tanzania OR Zimbabwe,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000187,Pygmy Eastern,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000187,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Pygmy Eastern,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000180,Seychellois,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000180,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Seychellois,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000184,Semitic Eastern,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000184,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Semitic Eastern,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000186,Semite Central,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000186,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Semite Central,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_59779,cyclic ketal,,A ketal in the molecule of which the ketal carbon and one or both oxygen atoms thereon are members of a ring.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:59779,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,cyclic ketal,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A ketal in the molecule of which the ketal carbon and one or both oxygen atoms thereon are members of a ring.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490415,polymer base textile container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0415,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490415,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,polymer base textile container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ARO_3007398,Werkgroep Richtlijnen Gevoeligheidsbepalingen (WRG),Working Group Guidelines Susceptibility Testing|Committee Guidelines Susceptibility Testing|Commissie Richtlijnen Gevoeligheidsbepalingen (CRG),The WRG is a standardized antimicrobial susceptibility testing methodology created by the Dutch Commissie Richtlijnen Gevoeligheidsbepalingen in 1981.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Working Group Guidelines Susceptibility Testing|Committee Guidelines Susceptibility Testing|Commissie Richtlijnen Gevoeligheidsbepalingen (CRG),,,,ARO:3007398,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/aro.owl,,,,,,,,,Werkgroep Richtlijnen Gevoeligheidsbepalingen (WRG),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The WRG is a standardized antimicrobial susceptibility testing methodology created by the Dutch Commissie Richtlijnen Gevoeligheidsbepalingen in 1981.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000105,beef chuck steak,,A beef steak that comes from the center portion of the Chuck Roll.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000105,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef chuck steak,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A beef steak that comes from the center portion of the Chuck Roll.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000350,veal hindshank,,A meat cut from the upper part of a hind leg.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000350,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,veal hindshank,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A meat cut from the upper part of a hind leg.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100877,scale of sampling,scale of sampling,A data field which describes the range of locations or entities sampled expressed in general terms.,FALSE,,,,,,,PCDS:scale_of_sampling,,,,,,,PCDS: Provide the scale of wastewater sampling by selecting a value from the picklist.,,,,,,,,,,,Drafted 2023-08-01,,,PCDS: Community-level surveillance,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,scale of sampling,scale of sampling slot,,,,GENEPIO:0100877,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,scale of sampling,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the range of locations or entities sampled expressed in general terms.,,PCDS: The range of locations or entities sampled expressed in general terms.,,,,,,
http://purl.obolibrary.org/obo/CHEBI_36586,carbonyl compound,,"Any compound containing the carbonyl group, C=O. The term is commonly used in the restricted sense of aldehydes and ketones, although it actually includes carboxylic acids and derivatives.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:36586,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,carbonyl compound,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Any compound containing the carbonyl group, C=O. The term is commonly used in the restricted sense of aldehydes and ketones, although it actually includes carboxylic acids and derivatives.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001101,predicted exposure start,,"A date-time datum that marks the predicted start of possible human or animal exposure to a pathogen agent, directly or indirectly, based on a suspected pathogen and first symptom date-time.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001101,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,predicted exposure start,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"A date-time datum that marks the predicted start of possible human or animal exposure to a pathogen agent, directly or indirectly, based on a suspected pathogen and first symptom date-time.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C20200,Outcome,result|outcome|Result|Outcome,The result of an action.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,result|outcome|Result|Outcome,,,,NCIT:C20200,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Outcome,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The result of an action.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001750,purified chromosome from specimen,,Purified chromosome: one or more chromosomes or replicons were experimentally purified.,FALSE,,,,,,,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/books/NBK54364/,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001750,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,purified chromosome from specimen,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,Purified chromosome: one or more chromosomes or replicons were experimentally purified.,,,,purified chromosome,,,,
http://purl.obolibrary.org/obo/OBI_0000717,HeliScope Single Molecule Sequencer,,is a DNA sequencer manufacturer by Helicos Corporation to carry out Single Molecule sequencing using reversible termination chemistry,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,HeliScope Single Molecule Sequencer,,,,,http://purl.obolibrary.org/obo/IAO_0000120,NCBI SRA: Helicos HeliScope,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0000717,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HeliScope Single Molecule Sequencer,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra,,,,is a DNA sequencer manufacturer by Helicos Corporation to carry out Single Molecule sequencing using reversible termination chemistry,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000160,exome resequencing project,,Exome resequencing project,FALSE,,,,,,,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/books/NBK54364/,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000160,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,exome resequencing project,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,Exome resequencing project,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02010124,animal breast,,A whole breast that is obtained from an animal.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02010124,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,animal breast,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A whole breast that is obtained from an animal.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020177,chicken organ,,An organ that derives from a chicken.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020177,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,chicken organ,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An organ that derives from a chicken.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001741,draft GenEpiO component record,,"This class contains components under development for fulfilling GenEpiO and other standard data specifications. Components are relevant to epidemiological, laboratory, clinical or environmental pathogen sample data collection and analysis.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001741,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,draft GenEpiO component record,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"This class contains components under development for fulfilling GenEpiO and other standard data specifications. Components are relevant to epidemiological, laboratory, clinical or environmental pathogen sample data collection and analysis.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002016,plant product,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002016,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,plant product,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C106561,Pregnant During the Study,Pregnant During the Study|PREGST,An indicator as to whether the female subject is pregnant during the study period.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Pregnant During the Study|PREGST,,,,NCIT:C106561,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Pregnant During the Study,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An indicator as to whether the female subject is pregnant during the study period.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00004944,Region (Azerbaijan),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00004944,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Region (Azerbaijan),http://purl.obolibrary.org/obo/GAZ_00004941,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001277,human water activity,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001277,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,human water activity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00005747,compost soil,,Soil which is derived from compost.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00005747,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,compost soil,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Soil which is derived from compost.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001751,Targeted Locus Loci data capture,,"TargetedLocusLoci: capturing specific loci (gene, genomic region, bar code standard).",FALSE,,,,,,,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/books/NBK54364/,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001751,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Targeted Locus Loci data capture,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"TargetedLocusLoci: capturing specific loci (gene, genomic region, bar code standard).",,,,targeted locus/loci,,,,
http://purl.obolibrary.org/obo/GENEPIO_0101090,residual sample status,,"PCDS: Residual samples are samples that remain after the sample material was used for its original purpose. Select a residual sample status from the picklist. If sample still exists, select 'Residual sample remaining (some sample left)'.",FALSE,,,,,,,PCDS:residual_sample_status,,,,,,,"PCDS: Residual samples are samples that remain after the sample material was used for its original purpose. Select a residual sample status from the picklist. If sample still exists, select 'Residual sample remaining (some sample left)'.",,,,,,,,,,,,,,PCDS: No residual sample (sample all used) [GENEPIO:0101088],,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0101090,,,,,,,,,,,,,,2026-04-13T17:16:47.336Z,,,,,,,,,,,,,,,,,,,residual sample status,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PCDS: The status of the residual sample (whether any sample remains after its original use).,,,,,,
http://purl.obolibrary.org/obo/HP_0003201,Rhabdomyolysis,Breakdown of skeletal muscle,Breakdown of muscle fibers that leads to the release of muscle fiber contents (myoglobin) into the bloodstream.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0035410|SNOMEDCT_US:89010004|SNOMEDCT_US:240131006,,,,,,,,,,,,,,,,,,,,,,,,,Breakdown of skeletal muscle,,,,HP:0003201,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Rhabdomyolysis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Breakdown of muscle fibers that leads to the release of muscle fiber contents (myoglobin) into the bloodstream.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00002452,invertebrate animal,,"Invertebrates are animals that neither possess nor develop a vertebral column (commonly known as a backbone or spine), derived from the notochord. This includes all animals apart from the subphylum Vertebrata.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00002452,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,invertebrate animal,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Invertebrates are animals that neither possess nor develop a vertebral column (commonly known as a backbone or spine), derived from the notochord. This includes all animals apart from the subphylum Vertebrata.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_9997,pristinamycin IIA,,"A macrolide that is (together with pristinamycin IA) a component of pristinamycin, an oral streptogramin antibiotic produced by <em>Streptomyces pristinaespiralis</em>. Pristinamycin exhibits bactericidal activity against Gram positive organisms including methicillin-resistant <em>Staphylococcus aureus</em>.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:46395,,,,,,CHEBI:9997,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,pristinamycin IIA,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A macrolide that is (together with pristinamycin IA) a component of pristinamycin, an oral streptogramin antibiotic produced by <em>Streptomyces pristinaespiralis</em>. Pristinamycin exhibits bactericidal activity against Gram positive organisms including methicillin-resistant <em>Staphylococcus aureus</em>.",,,,,,,,
http://purl.obolibrary.org/obo/BFO_0000027,object aggregate,,,FALSE,,,,,,,,,,,,,,,,,,,,,"ISBN:978-3-938793-98-5pp124-158#Thomas Bittner and Barry Smith, 'A Theory of Granular Partitions', in K. Munn and B. Smith (eds.), Applied Ontology: An Introduction, Frankfurt/Lancaster: ontos, 2008, 125-158.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,BFO:0000027,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ido.owl|http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,object aggregate,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002140,specimen strain or isolate identifier,,Name of strain from which sample was obtained OR name of isolate from which sample was obtained.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002140,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,specimen strain or isolate identifier,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,Name of strain from which sample was obtained OR name of isolate from which sample was obtained.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100103,filter,,A manufactured product which separates solids from fluids by adding a medium through which only a fluid can pass.,FALSE,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/NCIT_C41199,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100103,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,filter,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A manufactured product which separates solids from fluids by adding a medium through which only a fluid can pass.,,,,,,,,
http://purl.obolibrary.org/obo/OBA_2040154,age of onset of glaucoma,age glaucoma symptoms begin|age at onset of glaucoma,The age at which glaucoma manifestations first appear.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,age glaucoma symptoms begin|age at onset of glaucoma,,,,OBA:2040154,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age of onset of glaucoma,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The age at which glaucoma manifestations first appear.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490385,aniline-formaldehyde container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0385,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490385,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,aniline-formaldehyde container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002093,sequencing dna extraction method datum,,"The procedure used to obtain genomic DNA from a sample through chemical, physical or mechanical means.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002093,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,sequencing dna extraction method datum,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"The procedure used to obtain genomic DNA from a sample through chemical, physical or mechanical means.",,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00009998,"populated place, Angola",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00009998,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Angola",http://purl.obolibrary.org/obo/GAZ_00001095,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001495,outbreak date,,An outbreak date is on which disease onset appears to have occured,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001495,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,outbreak date,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,An outbreak date is on which disease onset appears to have occured,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001755,contact specification,,This is a collection of various human (and animal contact location) contact information specifications used in data standards.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001755,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,contact specification,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,This is a collection of various human (and animal contact location) contact information specifications used in data standards.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510045,energy special claim,,"All narrower term definitions are extracted from 58 Federal Register 2302, January 6, 1993, part 101.60(b) and from Corrigendum to Regulation (EC) No 1924/2006 of the European Parliament and of the Council of 20 December 2006 on nutrition and health claims made on foods.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0045,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510045,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,energy special claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"All narrower term definitions are extracted from 58 Federal Register 2302, January 6, 1993, part 101.60(b) and from Corrigendum to Regulation (EC) No 1924/2006 of the European Parliament and of the Council of 20 December 2006 on nutrition and health claims made on foods.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100055,subject age at time of specimen collection bin (60 - 69),,An age group that stratifies the age of a case to be between 60 to 69 years old (inclusive).,FALSE,,,,,,,60 - 69,,,,,,,,,,,,,,,,,,,,,,,,ready for release,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100055,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,subject age at time of specimen collection bin (60 - 69),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An age group that stratifies the age of a case to be between 60 to 69 years old (inclusive).,,,,,,,,
http://purl.obolibrary.org/obo/HP_0011014,Abnormal glucose homeostasis,,Abnormality of glucose homeostasis.,FALSE,,,,,,,,,,,,,,An abnormality of any process involved in the maintenance of an internal steady state of glucose within an organism or cell.,,,,,,,,,,,,,,,,,,UMLS:C4023598,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0011014,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal glucose homeostasis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Abnormality of glucose homeostasis.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490236,polyvinyl chloride plug,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0236,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490236,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,polyvinyl chloride plug,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470114,food sterilization by hot filling and cooling,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0114,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470114,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food sterilization by hot filling and cooling,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03460328,food interior bacterial curing,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=H0328,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03460328,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food interior bacterial curing,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001027,hiking,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001027,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,hiking,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_25807,organooxygen heterocyclic antibiotic,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:25807,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,organooxygen heterocyclic antibiotic,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000679,diagnostic odd ratio,,A measure of association that is the ratio of the odds of a positive test in those with disease relative to the odds of a positive test in those without disease.,FALSE,,,,,,,DOR,,,,,,,,,,,,,,"AHRQ https://effectivehealthcare.ahrq.gov/products/test-performance-metrics/appendixes: 
The diagnostic odds ratio (DOR) describes the odds of a positive test in those with disease relative to the odds of a positive test in those without disease.4 It can be computed in terms of sensitivity and specificity as well as in terms of positive and negative likelihood ratios (DOR = LR+/LR-). Thus this single measure includes information about both sensitivity and specificity and tends to be reasonably constant despite diagnostic threshold. However, it is impossible to use diagnostic odds ratios to weigh sensitivity and specificity separately, and to distinguish between tests with high sensitivity and low specificity and tests with low sensitivity and high specificity.

Another disadvantage is that it is difficult for clinicians to understand and apply, limiting its clinical value. This is partly because they are not often exposed to diagnostic odds ratios. A diagnostic odds ratio is similar to an odds ratio that measures strength of association in an observational study or effect size in a trial. However, contrary to the typical effect size magnitudes of such odds ratios (often between 0.5 and 2), diagnostic odds ratios can attain much larger values (often greater than 100).",,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000679,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,diagnostic odd ratio,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Harold Lehmann, Brian S. Alper, Joanne Dehnbostel, Kenneth Wilkins",,,,A measure of association that is the ratio of the odds of a positive test in those with disease relative to the odds of a positive test in those without disease.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002126,trier,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002126,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,trier,,,,,,,,,,,,,,,,,,,,,,,,,,,,Emma Griffiths,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001673,date of pregnancy outcome,,,FALSE,,,,,http://purl.obolibrary.org/obo/GENEPIO_0001225,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001673,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,date of pregnancy outcome,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0000178,blood,vertebrate blood|portion of blood,A fluid that is composed of blood plasma and erythrocytes.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:Blood|ZFA:0000007|XAO:0000124|Wikipedia:Blood|VHOG:0000224|UMLS:C0005767|TAO:0000007|NCIT:C12434|MIAA:0000315|MESH:D001769|MA:0000059|GAID:965|FMA:9670|EV:0100047|ENVO:02000027|EMAPA:16332|EHDAA:418|EHDAA2:0000176|EFO:0000296|CALOHA:TS-0079|BTO:0000089|AAO:0000046,,,,,,,,,,,,,,,,,,,,,,,,,vertebrate blood|portion of blood,,,,UBERON:0000178,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,blood,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A fluid that is composed of blood plasma and erythrocytes.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0000179,haemolymphatic fluid,,"Circulating fluid that is part of the hemolymphoid system. Blood, lymph, interstitial fluid or its analogs.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CARO:0000081,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0000179,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,haemolymphatic fluid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Circulating fluid that is part of the hemolymphoid system. Blood, lymph, interstitial fluid or its analogs.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0000174,excreta,waste substance|portion of excreted substance|excreted substance,A portion of organism substance that is the product of an excretion process that will be eliminated from the body. An excretion process is elimination by an organism of the waste products that arise as a result of metabolic activity.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:Excretion|FMA:9674|ENVO:02000022|EHDAA2_RETIRED:0003184|BTO:0000491|AEO:0000184,,,,,,,,,,,,,,,,,,,,,,,UBERON:0007550|UBERON:0000324,,waste substance|portion of excreted substance|excreted substance,,,,UBERON:0000174,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,excreta,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A portion of organism substance that is the product of an excretion process that will be eliminated from the body. An excretion process is elimination by an organism of the waste products that arise as a result of metabolic activity.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0000171,respiration organ,respiratory system organ|respiratory organ|organ of respiratory system|organ of apparatus respiratorius|breathing organ|apparatus respiratorius organ,"Organ that functions in gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,TGMA:0001247|SPD:0000428|SCTID:272626006,,,,,,,,,,,,,,,,,,,,,,,,,respiratory system organ|respiratory organ|organ of respiratory system|organ of apparatus respiratorius|breathing organ|apparatus respiratorius organ,,,,UBERON:0000171,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,respiration organ,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Organ that functions in gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0000173,amniotic fluid,,"Amniotic fluid is a bodily fluid consisting of watery liquid surrounding and cushioning a growing fetus within the amnion. It allows the fetus to move freely without the walls of the uterus being too tight against its body. Buoyancy is also provided. The composition of the fluid changes over the course of gestation. Initially, amniotic fluid is similar to maternal plasma, mainly water with electrolytes. As the fetus develops, proteins, carbohydrates, lipids, phospholipids originating from the lungs, fetal cells, and urea are deposited in the fluid.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,VHOG:0001267|UMLS:C0002638|NCIT:C13188|MESH:D000653|MA:0002893|GAID:1155|FMA:305905|EV:0100123|ENVO:02000021|EMAPA:36771|CALOHA:TS-0034|BTO:0000068,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0000173,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,amniotic fluid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Amniotic fluid is a bodily fluid consisting of watery liquid surrounding and cushioning a growing fetus within the amnion. It allows the fetus to move freely without the walls of the uterus being too tight against its body. Buoyancy is also provided. The composition of the fluid changes over the course of gestation. Initially, amniotic fluid is similar to maternal plasma, mainly water with electrolytes. As the fetus develops, proteins, carbohydrates, lipids, phospholipids originating from the lungs, fetal cells, and urea are deposited in the fluid.",,,,,,,,
http://purl.obolibrary.org/obo/OBI_0000430,plasmid,,"plasmid = DNA and has_quality circular and has_function
(is_realized_as some gene expression) GO:0010467",FALSE,,,,,,,,,,,,,,,,,,,,,group:OBI,,,,,plasmid,,,,,http://purl.obolibrary.org/obo/IAO_0000125,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0000430,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,plasmid,,,,,,,,,,,,,,,,,,,,,,,,,,,,person:Melanie Courtot,,,,"plasmid = DNA and has_quality circular and has_function
(is_realized_as some gene expression) GO:0010467",,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00002008,dust,,Particulate environmental material with diameters less than 500 micrometers.,FALSE,,,,,,,,,,,,,,Dust occurs in and may be deposited from the atmosphere.,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Dust|SWEETRealm:Dust|EcoLexicon:dust,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00002008,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,envoPolar,,,,,,,,dust,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Particulate environmental material with diameters less than 500 micrometers.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510126,religion- or customs-related claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0126,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510126,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,religion- or customs-related claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100805,salinity measurement value,salinity measurement value,An environmental data field which describes the numerical value of a measurement of salinity.,FALSE,,,,,,,PCDS:salinity_measurement_value,,,,,,,PCDS: Provide the numerical value of the measured salinity.,,,,,,,,,,,,,,PCDS: 35,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,salinity measurement value,salinity measurement value slot,,,,GENEPIO:0100805,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,salinity measurement value,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the numerical value of a measurement of salinity.,,PCDS: The numerical value of a measurement of salinity.,,,,,,
http://purl.obolibrary.org/obo/MP_0005621,abnormal cell physiology,,any functional anomaly of the vital processes of the cell,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MP:0005621,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mp.owl,,,,,,,,,abnormal cell physiology,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,any functional anomaly of the vital processes of the cell,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00003346,overripe,,A fruit ripeness characteristic in which a fruit has surpassed ripeness and is undergoing decomposition.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00003346,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,overripe,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A fruit ripeness characteristic in which a fruit has surpassed ripeness and is undergoing decomposition.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100822,sample temperature at collection unit,sample temperature unit (at collection),An environmental data field which describes the units of a measurement of temperature of a sample at the time of collection.,FALSE,,,,,,,PCDS:sample_temperature_unit_at_collection,,,,,,,PCDS: Provide the units of the measured temperature.,,,,,,,,,,,,,,PCDS: degree Celsius (C),,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,sample temperature unit (at collection),sample temperature at collection unit slot,,,,GENEPIO:0100822,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,sample temperature at collection unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the units of a measurement of temperature of a sample at the time of collection.,,PCDS: The units of a measurement of temperature of a sample at the time of collection.,,,,,,
http://purl.obolibrary.org/obo/HP_0001695,Cardiac arrest,Heart stops beating,An abrupt loss of heart function.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0018790|SNOMEDCT_US:410429000|SNOMEDCT_US:397829000,,,,,,,,,,,,,,,,,,,,,,,,,Heart stops beating,,,,HP:0001695,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Cardiac arrest,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An abrupt loss of heart function.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0036217,coelomic fluid,,A bodily fluid that is located in the coelom.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,BTO:0001708,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0036217,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,coelomic fluid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A bodily fluid that is located in the coelom.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00002236,sheep meat food product,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00002236,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,sheep meat food product,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C25720,Zip Code,Zip Code|ZIP,A system designed to expedite the sorting and delivery of mail by assigning a series of numbers to each delivery area in the United States.  Also used to refer to any individual delivery area code.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Zip Code|ZIP,,,,NCIT:C25720,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Zip Code,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A system designed to expedite the sorting and delivery of mail by assigning a series of numbers to each delivery area in the United States.  Also used to refer to any individual delivery area code.,,,,,,,"/^(:<zip>\d{5}(-\d{4})?)/, $zip",
http://purl.obolibrary.org/obo/GENEPIO_0001523,signs and symptoms,signs & symptoms,"An analytic datum which describes the observed or detectable signs, and experienced symptomps of an illness, injury, or condition.",FALSE,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Signs_and_symptoms,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,signs & symptoms,,,,GENEPIO:0001523,,,,,,,,,,,,,,2022-01-31T23:08:50Z,,,,,,,,,,,,,,,,,,,signs and symptoms,,,,,,,,,,,,,,,,,,,,,,,,,,,,0000-0002-9578-0788,,,,"An analytic datum which describes the observed or detectable signs, and experienced symptomps of an illness, injury, or condition.",,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0003274,thoracic cancer,tumour of thorax|tumor of thorax|thorax neoplasm|thoracic tumour|thoracic tumor,A primary or metastatic malignant neoplasm affecting the tissues of the thorax.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0153661|SCTID:188361007|NCIT:C3576|MEDGEN:56320|ICD9:195.1|ICD10CM:C76.1|DOID:5093,,,,,,,,,,,,,,,,,,,,,,,,tumour of thorax|tumor of thorax|thorax neoplasm|thoracic tumour|thoracic tumor,thoracic segment of trunk cancer|malignant tumour of thorax|malignant tumour of the thorax|malignant tumor of thorax|malignant tumor of the thorax|malignant thoracic tumour|malignant thoracic tumor|malignant thoracic segment of trunk neoplasm|malignant thoracic neoplasm|malignant neoplasm of thorax|malignant neoplasm of thoracic segment of trunk|malignant neoplasm of the thorax|cancer of thoracic segment of trunk,,,,MONDO:0003274,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,thoracic cancer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A primary or metastatic malignant neoplasm affecting the tissues of the thorax.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0002385,muscle tissue,textus muscularis|portion of muscle tissue|muscular tissue,Muscle tissue is a contractile tissue made up of actin and myosin fibers[GO].,FALSE,,,,,,,,,,,,,,"Vertebrate muscle is categorized into three major muscle types defined by their structural and functional properties: skeletal, cardiac and smooth. In Dmel the counterparts are somatic, heart/cardiac and visceral. Here we take a cell type based approach.",,,,,,,,,,,,,,,,,,galen:MuscleTissue|Wikipedia:Muscle_tissue|UMLS:C2328219|SCTID:91727004|NCIT:C12435|MESH:D009132|MA:0002437|FMA:9641|EMAPA:32715|EHDAA2:0003122|CALOHA:TS-0642|AEO:0000122|AAO:0000306,,,,,,,,,,,,,,,,,,,,,,,,,textus muscularis|portion of muscle tissue|muscular tissue,,,,UBERON:0002385,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,muscle tissue,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Muscle tissue is a contractile tissue made up of actin and myosin fibers[GO].,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0002384,connective tissue,textus connectivus|portion of connective tissue,Tissue with cells that deposit non-polarized extracellular matrix including connective tissue fibers and ground substance.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:ConnectiveTissue|ZFA:0001632|XAO:0001017|VSAO:0000017|UMLS:C0009780|TAO:0001641|SCTID:361919005|NCIT:C12374|MIAA:0000301|MESH:D003238|MAT:0000301|MA:0000011|GAID:100|FMA:9640|EMAPA:35251|EFO:0000952|CALOHA:TS-2009|BTO:0000421|AAO:0000098,,,,,,,,,,,,,,,,,,,,,,,,,textus connectivus|portion of connective tissue,,,,UBERON:0002384,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,connective tissue,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Tissue with cells that deposit non-polarized extracellular matrix including connective tissue fibers and ground substance.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001066,travel for pleasure,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001066,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,travel for pleasure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_03501310,switch,,"A device which can connect, disconnect, or divert current in an electrical circuit.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:03501310,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,switch,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A device which can connect, disconnect, or divert current in an electrical circuit.",,,,,,,,
http://purl.obolibrary.org/obo/HP_0000478,Abnormality of the eye,Abnormality of the eye|Abnormal eye,"Any abnormality of the eye, including location, spacing, and intraocular abnormalities.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0015397|UMLS:C0015393|SNOMEDCT_US:371409005|SNOMEDCT_US:371405004|SNOMEDCT_US:19416009,,,,,,,,,,,,,,,,,,,,,,,,,Abnormality of the eye|Abnormal eye,,,,HP:0000478,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,http://purl.oboInOwllibrary.org/oboInOwl/hp#hposlim_core,,,,,,,,Abnormality of the eye,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Any abnormality of the eye, including location, spacing, and intraocular abnormalities.",,,,,,,,
http://purl.obolibrary.org/obo/COB_0000082,planned process,,A process that is initiated by an agent who intends to carry out a plan to achieve an objective through one or more actions as described in a plan specification.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,COB:0000082,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl|http://purl.obolibrary.org/obo/cob.owl,,,,,,,,,planned process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A process that is initiated by an agent who intends to carry out a plan to achieve an objective through one or more actions as described in a plan specification.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03450008,griddle cooking,,Cooking on a flat surface at medium heat with only a sufficient amount of fat used to prevent sticking.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=G0008,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03450008,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,griddle cooking,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Cooking on a flat surface at medium heat with only a sufficient amount of fat used to prevent sticking.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_86324,quinolone antibiotic,,An organonitrogen heterocyclic antibiotic whose structure contains a quinolone or quinolone-related skeleton.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:86324,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,quinolone antibiotic,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An organonitrogen heterocyclic antibiotic whose structure contains a quinolone or quinolone-related skeleton.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0100763,Abnormality of the lymphatic system,,"An anomaly of the lymphatic system, a network of lymphatic vessels that carry a clear fluid called lymph unidirectionally towards either the right lymphatic duct or the thoracic duct, which in turn drain into the right and left subclavian veins respectively.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4021976|UMLS:C0024228|SNOMEDCT_US:362971004|SNOMEDCT_US:3305006|SNOMEDCT_US:234087005|SNOMEDCT_US:111590001,,,,,,,,,,,,,,,,,,,,,,,HP:0003012,,,,,,HP:0100763,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormality of the lymphatic system,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An anomaly of the lymphatic system, a network of lymphatic vessels that carry a clear fluid called lymph unidirectionally towards either the right lymphatic duct or the thoracic duct, which in turn drain into the right and left subclavian veins respectively.",,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_33213,Bilateria,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,Bilateria,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:33213,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Bilateria,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UO_1000185,degree based unit,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:1000185,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,degree based unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C141241,"Death During, or within 90 Days of, Index Hospital Admission","Death Less than 90 Days or During Index Hospital Admission|Death During, or within 90 Days of, Index Hospital Admission",An indication that death occurred on or within 90 days of a patient's initial admission to a hospital.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Death Less than 90 Days or During Index Hospital Admission|Death During, or within 90 Days of, Index Hospital Admission",,,,NCIT:C141241,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,"Death During, or within 90 Days of, Index Hospital Admission",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An indication that death occurred on or within 90 days of a patient's initial admission to a hospital.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100012,travel-associated surveillance strategy,,A priority surveillance strategy in which individuals are selected if they have a travel history outside of the reporting region within a specified number of days before onset of symptoms.,FALSE,,,,,,,Travel-associated surveillance,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100012,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,travel-associated surveillance strategy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A priority surveillance strategy in which individuals are selected if they have a travel history outside of the reporting region within a specified number of days before onset of symptoms.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100846,sequence assembly length,sequence assembly length,A data field which describes the length of the genome generated by assembling reads using a scaffold or by reference-based mapping.,FALSE,,,,,,,PCDS:sequence_assembly_length,,,,,,,PCDS: Provide a numerical value (no need to include units).,,,,,,,,,,,,,,PCDS: 34272,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,sequence assembly length,sequence assembly length slot,,,,GENEPIO:0100846,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,sequence assembly length,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the length of the genome generated by assembling reads using a scaffold or by reference-based mapping.,,PCDS: The length of the genome generated by assembling reads using a scaffold or by reference-based mapping.,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000508,terrace,terrace|rock terrace|ledge|bench,"A step-like feature between higher and lower ground: a relatively flat or gently inclined shelf of earth, backed and fronted by steep slopes or manmade detaining walls.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Terrace|TGN:21513|TGN:21498|Geonames:T.TRR|Geonames:T.BNCH|FTT:248|FTT:247|EcoLexicon:terrace,,,,,,,,,,,,,,,,,,,,,,,,,TERRACE,terrace|rock terrace|ledge|bench,,,ENVO:00000508,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,terrace,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A step-like feature between higher and lower ground: a relatively flat or gently inclined shelf of earth, backed and fronted by steep slopes or manmade detaining walls.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001936,454 Genome Sequencer FLX Titanium,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI SRA: 454 GS FLX Titanium,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001936,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,454 Genome Sequencer FLX Titanium,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000002,water well,,A well which provides access to groundwater held  in an aquifer.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Water_well,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01000002,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,water well,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A well which provides access to groundwater held  in an aquifer.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000023,beef top round roast (boneless),,A boneless beef top round roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000023,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef top round roast (boneless),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A boneless beef top round roast.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00002680,mahi mahi fillet,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00002680,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,mahi mahi fillet,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530158,poultry breast,,A whole breast that is obtained from a poultry.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0158,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530158,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,poultry breast,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A whole breast that is obtained from a poultry.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510178,"\""fresh frozen\""label claim",,The food was quickly frozen while still fresh.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0178,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510178,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"""fresh frozen""label claim",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The food was quickly frozen while still fresh.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00008796,Province (Cambodia),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00008796,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Province (Cambodia),http://purl.obolibrary.org/obo/GAZ_00006888,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00003926,random sample animal meat cut,,An animal meat (cut) and an output of simple random sampling.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00003926,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,random sample animal meat cut,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An animal meat (cut) and an output of simple random sampling.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_35915,sterol ester,,A steroid ester obtained by formal condensation of the carboxy group of any carboxylic acid with the 3-hydroxy group of a sterol.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:9269|CHEBI:9268|CHEBI:26772|CHEBI:26770|CHEBI:18213|CHEBI:15115|CHEBI:13220,,,,,,CHEBI:35915,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,sterol ester,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A steroid ester obtained by formal condensation of the carboxy group of any carboxylic acid with the 3-hydroxy group of a sterol.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100021,intra-jurisdictional outbreak investigation strategy,,An outbreak investigation sampling strategy in which individuals are chosen for investigation into a disease outbreak that only has connections within a single jurisdiction.,FALSE,,,,,,,Intra-jurisdictional outbreak investigation,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100021,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,intra-jurisdictional outbreak investigation strategy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An outbreak investigation sampling strategy in which individuals are chosen for investigation into a disease outbreak that only has connections within a single jurisdiction.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000179,beef short plate,,A beef cut that is located on the underside of the animal below the rib primal.  The end of the sixth through the twelfth rib is contained within the plate primal cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000179,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef short plate,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A beef cut that is located on the underside of the animal below the rib primal.  The end of the sixth through the twelfth rib is contained within the plate primal cut.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100357,contact with infected individual,,"A type of contact in which an individual comes in contact with an infected person, either directly or indirectly.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100357,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-02-28T05:08:07.274Z,,,,,,,,,,,,,,,,,,,contact with infected individual,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A type of contact in which an individual comes in contact with an infected person, either directly or indirectly.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_25693,organic heteromonocyclic compound,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:25693,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,organic heteromonocyclic compound,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000678,prevalence ratio,,A measure of association that is the ratio of two prevalences.,FALSE,,,,,,,,,,,,,,,,,,,,,"https://www.ctspedia.org/do/view/CTSpedia/PrevalenceRatio#:~:text=Reference-,Definition%20of%20Prevalence%20Ratio,the%20proportion%20with%20the%20exposure.
The ratio of the proportion of the persons with disease over the proportion with the exposure.

Calculation is described here:
https://sphweb.bumc.bu.edu/otlt/MPH-Modules/PH717-QuantCore/PH717-Module3-Frequency-Association/PH717-Module3-Frequency-Association12.html",,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000678,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,prevalence ratio,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Brian S. Alper, Harold Lehmann, Joanne Dehnbostel, Kenneth Wilkins, Muhammad Afzal, Janice Tufte",,,,A measure of association that is the ratio of two prevalences.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C41085,Person Contact Information,Person Contact Information|Contact Info,Information regarding the person who is acting as a channel for communication between groups.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Person Contact Information|Contact Info,,,,NCIT:C41085,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Person Contact Information,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Information regarding the person who is acting as a channel for communication between groups.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100732,enzyme-linked immunosorbent assay (ELISA) toxin binding tag,enzyme-linked immunosorbent assay (ELISA) toxin binding data type|ELISA toxin binding data type,A microbiological quantification data tag which indicates the presence of data which describes enzyme-linked immunosorbent assay (ELISA) toxin binding.,FALSE,,,,,,,ELISA toxin binding,,,,,,,Example Guidance: Use this tag to indicate additional data is available that provides quantification data from ELISA toxin binding assay(s).,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,enzyme-linked immunosorbent assay (ELISA) toxin binding data type|ELISA toxin binding data type,,,,GENEPIO:0100732,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-05-18T19:08:34.869Z,,,,,,,,,,,,,,,,,,,enzyme-linked immunosorbent assay (ELISA) toxin binding tag,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A microbiological quantification data tag which indicates the presence of data which describes enzyme-linked immunosorbent assay (ELISA) toxin binding.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0033709,Increased sputum production,Increased phlegm,An increase in the amount of airway mucus. This feature may be characterized by frequent or excessive throat clearing (exhalation through tightly constricted laryngopharyngeal tissues accompanied by vibration of the palatoglossal arch and the vocal folds serving to clear mucus from the airway).,FALSE,,,,,,,,,,,,,,"If excessive sputum production is manifested by frequent and often involuntary coughing, the HPO term Productive cough should be used.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Increased phlegm,,,,HP:0033709,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Increased sputum production,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An increase in the amount of airway mucus. This feature may be characterized by frequent or excessive throat clearing (exhalation through tightly constricted laryngopharyngeal tissues accompanied by vibration of the palatoglossal arch and the vocal folds serving to clear mucus from the airway).,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0600044,lavage,,A protocol application to separate cells and/or cellular secretions from an anatomical space by the introduction and removal of fluid,FALSE,,,,,,,,,,,,,,,,,,,,,OBI branch derived,,,,"This is not washing, in which case the material of interest is not the resulting fluid",lavage,,the collection of bronchoalveolar lavage fluid (BAL) from the lungs of mice in order to study the cytokines present,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0600044,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,lavage,,,,,,,,,,,,,,,,,,,,,,,,,,,,PlanAndPlannedProcess Branch,,,,A protocol application to separate cells and/or cellular secretions from an anatomical space by the introduction and removal of fluid,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001972,viral RNA source,,Viral RNA.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI SRA: VIRAL RNA,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001972,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,viral RNA source,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,Viral RNA.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100090,incomplete Kawasaki disease,incomplete Kawasaki syndrome,"A diagnosis of Kawasaki disease (KD) when patients fail to meet “classic” clinical features but have laboratory findings usually associated with KD and no reasonable alternate diagnosis, they are said to have incomplete or atypical KD.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,incomplete Kawasaki syndrome,,,,GENEPIO:0100090,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,incomplete Kawasaki disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A diagnosis of Kawasaki disease (KD) when patients fail to meet “classic” clinical features but have laboratory findings usually associated with KD and no reasonable alternate diagnosis, they are said to have incomplete or atypical KD.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510228,food allergen labelling about lupine and products thereof,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0228,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510228,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food allergen labelling about lupine and products thereof,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02010210,piece of light animal meat (raw),,A raw piece of light animal meat.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02010210,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of light animal meat (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw piece of light animal meat.,,,,,,,,
http://www.ebi.ac.uk/efo/EFO_0009712,father's age at death,,The age of a person's father at which father's death occurred.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,efo:EFO_0009712,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,father's age at death,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The age of a person's father at which father's death occurred.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001759,millisiemens per centimetre,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001759,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,millisiemens per centimetre,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_33655,aromatic compound,,A cyclically conjugated molecular entity with a stability (due to delocalization) significantly greater than that of a hypothetical localized structure (e.g. Kekulé structure) is said to possess aromatic character.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:33655,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,aromatic compound,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A cyclically conjugated molecular entity with a stability (due to delocalization) significantly greater than that of a hypothetical localized structure (e.g. Kekulé structure) is said to possess aromatic character.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000009,beef bottom round roast (raw),,A raw beef bottom round roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000009,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef bottom round roast (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef bottom round roast.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001009,obsolete: restaurant,,"A restaurant or an eatery, is a business which prepares and serves food and drinks to customers in exchange for money.",TRUE,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Restaurant,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001009,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: restaurant,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,http://purl.obolibrary.org/obo/ENVO_01000934,,,"A restaurant or an eatery, is a business which prepares and serves food and drinks to customers in exchange for money.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000452,bison ribeye steak (raw),,A raw bison ribeye steak.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000452,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,bison ribeye steak (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw bison ribeye steak.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102158,PacBio Vega,,A benchtop PacBio sequencing instrument model which utilizes single-molecule real-time (SMRT) sequencing technology to generate long-read sequences with high accuracy (HiFi reads).,FALSE,,,,,,,,,,,,,,,,,,,,,https://www.pacb.com/wp-content/uploads/Vega-brochure.pdf,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102158,,,,,,,,,,,,,https://orcid.org/0000-0002-7654-6902|https://orcid.org/0000-0001-8008-8249,2025-03-21T01:14:47.111Z,,,,,,,,,,,,,,,,,,,PacBio Vega,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A benchtop PacBio sequencing instrument model which utilizes single-molecule real-time (SMRT) sequencing technology to generate long-read sequences with high accuracy (HiFi reads).,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000179,desert biome,,A desert ecosystem which is undergoing climactic ecological succession.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SPIRE:Desert_or_dune,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01000179,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,wwfBiome,,,,,,,,desert biome,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A desert ecosystem which is undergoing climactic ecological succession.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0011410,Caesarean section,Caesarean section,Delivery of a fetus through surgical incisions made through the abdominal wall (laparotomy) and the uterine wall (hysterotomy).,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C1384674|SNOMEDCT_US:200144004,,,,,,,,,,,,,,,,,,,,,,,,,Caesarean section,,,,HP:0011410,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Caesarean section,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Delivery of a fetus through surgical incisions made through the abdominal wall (laparotomy) and the uterine wall (hysterotomy).,,,,,,,,
http://purl.obolibrary.org/obo/APOLLO_SV_00000617,population count,,A count of simulated or physical individuals in a population.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,APOLLO_SV:00000617,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/apollo_sv.owl,,,,,,,,,population count,,,,,,,,,,,,,,,,,,,,,,,,,,,,Matthew Diller,,,,A count of simulated or physical individuals in a population.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0001367,Abnormal joint morphology,Anomaly of the joints|Abnormality of the joints|Abnormal shape of joints,"An abnormal structure or form of the joints, i.e., one or more of the articulations where two bones join.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0240083|UMLS:C0022408|SNOMEDCT_US:399269003,,,,,,,,,,,,,,,,,,,,,,,,,Anomaly of the joints|Abnormality of the joints|Abnormal shape of joints,,,,HP:0001367,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal joint morphology,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An abnormal structure or form of the joints, i.e., one or more of the articulations where two bones join.",,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0695,Itelman in Russia (SGDP),Itelman,A population made up of 1 samples from Itelman individuals recruited in Russia as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Central Asian and Siberian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Itelman,,,,HANCESTRO:0695,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Itelman in Russia (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 1 samples from Itelman individuals recruited in Russia as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Central Asian and Siberian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0699,Tlingit in Russia (SGDP),Tlingit,A population made up of 2 samples from Tlingit individuals recruited in Russia as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Central Asian and Siberian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Tlingit,,,,HANCESTRO:0699,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Tlingit in Russia (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Tlingit individuals recruited in Russia as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Central Asian and Siberian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0694,Even in Russia (SGDP),Even,A population made up of 3 samples from Even individuals recruited in Russia as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Central Asian and Siberian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Even,,,,HANCESTRO:0694,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Even in Russia (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 3 samples from Even individuals recruited in Russia as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Central Asian and Siberian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0691,Eskimo Chaplin in Russia (SGDP),Eskimo Chaplin,A population made up of 1 samples from Eskimo Chaplin individuals recruited in Russia as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Central Asian and Siberian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Eskimo Chaplin,,,,HANCESTRO:0691,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Eskimo Chaplin in Russia (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 1 samples from Eskimo Chaplin individuals recruited in Russia as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Central Asian and Siberian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0690,Chukchi in Russia (SGDP),Chukchi,A population made up of 1 samples from Chukchi individuals recruited in Russia as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Central Asian and Siberian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Chukchi,,,,HANCESTRO:0690,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Chukchi in Russia (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 1 samples from Chukchi individuals recruited in Russia as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Central Asian and Siberian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0697,Mansi in Russia (SGDP),Mansi,A population made up of 2 samples from Mansi individuals recruited in Russia as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Central Asian and Siberian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Mansi,,,,HANCESTRO:0697,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Mansi in Russia (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Mansi individuals recruited in Russia as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Central Asian and Siberian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0698,Mongola in China (SGDP),Mongola,A population made up of 2 samples from Mongola individuals recruited in China as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Central Asian and Siberian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Mongola,,,,HANCESTRO:0698,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Mongola in China (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Mongola individuals recruited in China as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Central Asian and Siberian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0693,Eskimo Sireniki in Russia (SGDP),Eskimo Sireniki,A population made up of 2 samples from Eskimo Sireniki individuals recruited in Russia as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Central Asian and Siberian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Eskimo Sireniki,,,,HANCESTRO:0693,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Eskimo Sireniki in Russia (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Eskimo Sireniki individuals recruited in Russia as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Central Asian and Siberian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0692,Eskimo Naukan in Russia (SGDP),Eskimo Naukan,A population made up of 2 samples from Eskimo Naukan individuals recruited in Russia as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Central Asian and Siberian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Eskimo Naukan,,,,HANCESTRO:0692,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Eskimo Naukan in Russia (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Eskimo Naukan individuals recruited in Russia as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Central Asian and Siberian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0696,Kyrgyz in Kyrgyzystan (SGDP),Kyrgyz,A population made up of 2 samples from Kyrgyz individuals recruited in Kyrgyzystan as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Central Asian and Siberian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Kyrgyz,,,,HANCESTRO:0696,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Kyrgyz in Kyrgyzystan (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Kyrgyz individuals recruited in Kyrgyzystan as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Central Asian and Siberian.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0001005,Dermatological manifestations of systemic disorders,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4025812,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0001005,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,http://purl.oboInOwllibrary.org/oboInOwl/hp#secondary_consequence,,,,,,,,Dermatological manifestations of systemic disorders,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100966,genomic target enrichment method,genomic target enrichment method,A data field which describes the molecular technique used to selectively capture and amplify specific regions of interest from a genome.,FALSE,,,,,,,PCDS:genomic_target_enrichment_method,,,,,,,PCDS: Provide the name of the enrichment method,,,,,,,,,,,Drafted 2023-12-02,,,PCDS: hybrid selection method,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,genomic target enrichment method,genomic target enrichment method slot,,,,GENEPIO:0100966,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,genomic target enrichment method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the molecular technique used to selectively capture and amplify specific regions of interest from a genome.,,PCDS: The molecular technique used to selectively capture and amplify specific regions of interest from a genome.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001806,isolate (pathogen) identification,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001806,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,isolate (pathogen) identification,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_03501215,nurse call button,nurse call cord,A switch which allows patients in health care settings to alert a nurse or other health care staff member.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,nurse call cord,,,,ENVO:03501215,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,nurse call button,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A switch which allows patients in health care settings to alert a nurse or other health care staff member.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00001015,plant food product,,A food product which has as a defining ingredient some plant material.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00001015,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,plant food product,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A food product which has as a defining ingredient some plant material.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490196,ampul,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0196,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490196,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,ampul,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000071,reaction rate,,reaction rate is a measurement datum which represents the speed of a chemical reaction turning reactive species into product species of event (i.e the number of such conversions)s occuring over a time interval,FALSE,,,,,,,,,,,,,,,,,,,,,STATO,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000071,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,reaction rate,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra|Alejandra Gonzalez-Beltran|Orlaith Burke,,,,reaction rate is a measurement datum which represents the speed of a chemical reaction turning reactive species into product species of event (i.e the number of such conversions)s occuring over a time interval,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001653,previous (archaic) identifier,,An identifier that had been used previously but is no longer promoted.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001653,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,previous (archaic) identifier,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,An identifier that had been used previously but is no longer promoted.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001837,AHA HIPPA standard,,The American Hospital Association has issued HIPAA Updated Guidelines for Releasing Information on the Condition of Patients,FALSE,,,,,,,American Hospital Association HIPAA Standard,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000120,AHA HIPPA,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001837,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AHA HIPPA standard,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,http://www.webcitation.org/5VBWPbFgY|http://www.aha.org/content/00-10/overview0302.pdf,,The American Hospital Association has issued HIPAA Updated Guidelines for Releasing Information on the Condition of Patients,,,,,,,,
http://purl.obolibrary.org/obo/DOID_13282,intestinal tuberculosis,,"A gastrointestinal tuberculosis that involves diffuse mucosal fold thickening, formation of ulcers and fistulae located_in intestine. The infection has_symptom abdominal pain, has_symptom gastrointestinal bleeding, has_symptom nausea and has_symptom vomiting.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:13282,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,intestinal tuberculosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A gastrointestinal tuberculosis that involves diffuse mucosal fold thickening, formation of ulcers and fistulae located_in intestine. The infection has_symptom abdominal pain, has_symptom gastrointestinal bleeding, has_symptom nausea and has_symptom vomiting.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001593,sequence project objective,,"A sequence project objective has a goal of submission of sequence data to standard archival sequence databases (yielding accession.version identifiers; e.g., whole genome shotgun, cDNA sequences, transcript shotgun assemblies)",FALSE,,,,,,,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/books/NBK54364/,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001593,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,sequence project objective,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"A sequence project objective has a goal of submission of sequence data to standard archival sequence databases (yielding accession.version identifiers; e.g., whole genome shotgun, cDNA sequences, transcript shotgun assemblies)",,,,sequence,,,,
http://purl.obolibrary.org/obo/OBI_0001900,specimen identifier assigned by specimen repository,,A specimen identifier which is assigned by a specimen repository,FALSE,,,,,,,,,,,,,,,,,,,,,NIAID GSCID-BRC metadata working group,,,,,specimen identifier assigned by specimen repository,,,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0001900,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,specimen identifier assigned by specimen repository,,,,,,,Specimen Repository Sample ID,,,,,,,,,,,,,,,,,,,,,"PERSON: Chris Stoeckert, Jie Zheng",,,,A specimen identifier which is assigned by a specimen repository,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02021126,lamb material,,Material that derives from some lamb.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02021126,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lamb material,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Material that derives from some lamb.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00003074,manufactured product,manufactured good,"A material entity that has been processed by humans or their technology in any way, including intermediate products as well as final products.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,manufactured good,,,,ENVO:00003074,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,manufactured product,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A material entity that has been processed by humans or their technology in any way, including intermediate products as well as final products.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000011,"beef bottom round roast (boneless, raw)",,A raw and boneless beef bottom round roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000011,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"beef bottom round roast (boneless, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw and boneless beef bottom round roast.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0000689,454 Genome Sequence 20,,"is a DNA sequencer first manufactured by 454 Life Science Corporation in 2005, and enables pyrosequencing to be performed. It comprises both optics and fluidics subsystems, which are controlled by a computer subsystem. The fluidics subsystem ensures accurate reagent dispensing. It consists of a reagents cassette (which holds the reagent containers), a sipper manifold, pumps, valves, and debubblers. The fluidics subsystem flows the sequencing reagents across the wells of the PicoTiterPlate device, and moves the spent reagents from the PicoTiterPlate device to the waste receptacle. The optics subsystem consists of a CCD camera and a camera controller. The camera captures the light emitted in the wells of the PicoTiterPlate device during each step of the sequencing cycle, and sends the digital images to the computer subsystem for processing. The computer controls the other Sequencer subsystems, and processes the digital images sent by the camera to extract the DNA sequence information.",FALSE,,,,,,,GS 20,,,,,,,,,,,,,,,,,,,454 Genome Sequence 20,,"PMID: 18946007.Pyrosequencing analysis of the oral microflora of healthy adults.  Keijser BJ, Zaura E, Huse SM, van der Vossen JM, Schuren FH, Montijn RC, ten Cate JM, Crielaard W. J Dent Res. 2008 Nov;87(11):1016-20.",,,http://purl.obolibrary.org/obo/IAO_0000120,NCBI SRA: 454 GS 20,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0000689,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,454 Genome Sequence 20,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra,,,,"is a DNA sequencer first manufactured by 454 Life Science Corporation in 2005, and enables pyrosequencing to be performed. It comprises both optics and fluidics subsystems, which are controlled by a computer subsystem. The fluidics subsystem ensures accurate reagent dispensing. It consists of a reagents cassette (which holds the reagent containers), a sipper manifold, pumps, valves, and debubblers. The fluidics subsystem flows the sequencing reagents across the wells of the PicoTiterPlate device, and moves the spent reagents from the PicoTiterPlate device to the waste receptacle. The optics subsystem consists of a CCD camera and a camera controller. The camera captures the light emitted in the wells of the PicoTiterPlate device during each step of the sequencing cycle, and sends the digital images to the computer subsystem for processing. The computer controls the other Sequencer subsystems, and processes the digital images sent by the camera to extract the DNA sequence information.",,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000069,Zulu,,A Nguni population with a population size of 12 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000069,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Zulu,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Nguni population with a population size of 12 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000067,Bassa,,A Bantu Western population with a population size of 0.8 million,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000067,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Bassa,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Bantu Western population with a population size of 0.8 million,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000066,Taveta,,A Bantu Eastern population with a population size of 0.026 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000066,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Taveta,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Bantu Eastern population with a population size of 0.026 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000060,Nama,,A Khoisan South population with a population size of 0.13 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000060,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Nama,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Khoisan South population with a population size of 0.13 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000064,Susu,,A Mande Western population with a population size of 2.2 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000064,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Susu,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Mande Western population with a population size of 2.2 millions,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001043,special diet,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001043,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,special diet,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470161,preservation by electron accelerator radiation,,"Treated by electron accelerator radiation, for example to kill insects in cereals.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0161,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470161,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,preservation by electron accelerator radiation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Treated by electron accelerator radiation, for example to kill insects in cereals.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000076,beef shoulder roast (raw),,A raw beef shoulder roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000076,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef shoulder roast (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef shoulder roast.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0101029,experimental protocol;experimental protocol field;experimental protocol name,experimental protocol,A data field which describes the name of the overarching experimental methodology that was used.,FALSE,,,,,,,PCDS:experimental_protocol_name,,,,,,,"PCDS: Provide the name of the methodology used in your study. If available, provide a link to the protocol.",,,,,,,,,,,,,,PCDS: Legionella Testing Protocol 2025,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,experimental protocol,experimental protocol slot,,,,GENEPIO:0101029,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,experimental protocol;experimental protocol field;experimental protocol name,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the name of the overarching experimental methodology that was used.,,PCDS: The name of the overarching experimental methodology that was used to process the biomaterial.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000078,sequencing run multiplex identifiers,,"Molecular barcodes, called Multiplex Identifiers (MIDs), that are used to specifically tag unique samples in a sequencing run. Sequence should be reported in uppercase letters",FALSE,,,,,,,,,,,,,,,,,,,,,GROUP: MIxS,,,,,,,S017,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000078,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,,,,,,,sequencing run multiplex identifiers,,,,,Sequencing,,,,,,,,,,,,,,,,,,,,,,Multiplex identifiers,,,Derived from Illumina Sample Sheet,,"Molecular barcodes, called Multiplex Identifiers (MIDs), that are used to specifically tag unique samples in a sequencing run. Sequence should be reported in uppercase letters",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000453,bison chuck,,A bison cut that extends from the neck to the fifth rib and includes the shoulder blade and upper arm.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000453,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,bison chuck,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A bison cut that extends from the neck to the fifth rib and includes the shoulder blade and upper arm.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000197,beef shank,,"A portion of the beef leg, which is used extensively for movement.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000197,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef shank,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A portion of the beef leg, which is used extensively for movement.",,,,,,,,
http://purl.obolibrary.org/obo/OMIT_0020917,Shiga toxin 1,,A type of Shiga toxin found in E. coli,FALSE,,,,,,,Stx1,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4270005/,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,http://purl.obolibrary.org/obo/OMIT_0020917,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OMIT:0020917,,,,,,,,,,,,,,,,,,,,,,,,http://snomed.info/sct/900000000000207008|http://purl.obolibrary.org/obo/omit.owl,,,,,,,,,Shiga toxin 1|Shiga Toxin 1,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A type of Shiga toxin found in E. coli,,,,,,,,
http://purl.obolibrary.org/obo/OMIT_0020915,Shiga Toxins,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OMIT:0020915,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/omit.owl,,,,,,,,,Shiga Toxins,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/OMIT_0020918,Shiga toxin 2,,A type of Shiga toxin found in E. coli which is antigenically distinct from Shiga toxin 1,FALSE,,,,,,,Stx2,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4270005/,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,http://purl.obolibrary.org/obo/OMIT_0020918,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OMIT:0020918,,,,,,,,,,,,,,,,,,,,,,,,http://snomed.info/sct/900000000000207008|http://purl.obolibrary.org/obo/omit.owl,,,,,,,,,Shiga toxin 2|Shiga Toxin 2,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A type of Shiga toxin found in E. coli which is antigenically distinct from Shiga toxin 1,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0002118,urinary system disorder,"urological disorders|urological disorder|urological diseases|urological disease|urologic disorder|urologic disease|urinary tract disorder|urinary tract diseases|urinary tract disease|urinary system disorder|urinary disease|renal system disease or disorder|renal system disease|disorder of urinary system|disorder of the urinary system|disorder of renal system|diseases, urological|diseases, urologic|diseases, urinary tract|disease, urological|disease, urologic|disease, urinary tract|disease or disorder of renal system|disease of renal system",A disease involving the renal system.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0042075|SCTID:128606002|NCIT:C3430|MESH:D014570|MEDGEN:21791|ICD9:V47.4|EFO:0009690|DOID:18,,,,,,,,,,,,,,,,,,,,,,,,,"urological disorders|urological disorder|urological diseases|urological disease|urologic disorder|urologic disease|urinary tract disorder|urinary tract diseases|urinary tract disease|urinary system disorder|urinary disease|renal system disease or disorder|renal system disease|disorder of urinary system|disorder of the urinary system|disorder of renal system|diseases, urological|diseases, urologic|diseases, urinary tract|disease, urological|disease, urologic|disease, urinary tract|disease or disorder of renal system|disease of renal system",,,,MONDO:0002118,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#rare_grouping|http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar|http://purl.oboInOwllibrary.org/oboInOwl/mondo#harrisons_view,,,,,,,,urinary system disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A disease involving the renal system.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C54014,Castrated Female,Spayed Female|Castrated Female,A female individual who has had her ovaries removed.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Spayed Female|Castrated Female,,,,NCIT:C54014,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Castrated Female,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A female individual who has had her ovaries removed.,,,,,,,,
http://purl.obolibrary.org/obo/OBA_2001017,age of onset of allergic disease,age at onset of allergic disease|age allergic disease symptoms begin,The age at which allergic disease manifestations first appear.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,age at onset of allergic disease|age allergic disease symptoms begin,,,,OBA:2001017,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age of onset of allergic disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The age at which allergic disease manifestations first appear.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000290,pork loin blade chop,,Pork loin chop that is derived from the blade end of the pork loin and must include the blade bone/cartilage.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000290,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pork loin blade chop,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Pork loin chop that is derived from the blade end of the pork loin and must include the blade bone/cartilage.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C15310,Paracentesis,paracentesis|Paracentesis,The removal of excess fluid via needle puncture from any body cavity.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,paracentesis|Paracentesis,,,,NCIT:C15310,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Paracentesis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The removal of excess fluid via needle puncture from any body cavity.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000451,bison ribeye steak,,A bison steak that is a cut from the rib-eye roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000451,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,bison ribeye steak,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A bison steak that is a cut from the rib-eye roast.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001123,specimen collector sample ID,specimen collector sample ID|sample_collector_sample_ID|sample collector sample identifier,An identifier field which describes the user-defined name for the sample.,FALSE,,,,,,,PCDS:specimen_sample_collector_sample_id,,,,,,,"PCDS: The sample ID should represent the identifier assigned to the sample at time of collection, for which all the descriptive information applies. Every sample ID from a single submitter must be unique. The ID may use any format, but should be concise, consistent within the lab, and informative where possible. If the original sample ID is unknown or cannot be provided, leave blank or provide a null value.",,,,,,,,,,,,,,PCDS: ABCD123,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,specimen collector sample ID|sample_collector_sample_ID|sample collector sample identifier,specimen collector sample ID slot|sample collector sample identifier slot|sample collector sample identifier field,,,,GENEPIO:0001123,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,specimen collector sample ID,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An identifier field which describes the user-defined name for the sample.,,PCDS: The user-defined name for the sample.,,,,,,
http://purl.obolibrary.org/obo/UBERON_0008246,pyloric stomach,,"The mouth of a starfish is located on the underside of the body, and opens through a short esophagus into firstly a cardiac stomach, and then, a second, pyloric stomach. Each arm also contains two pyloric caeca, long hollow tubes branching outwards from the pyloric stomach. Each pyloric caecum is lined by a series of digestive glands, which secrete digestive enzymes and absorb nutrients from the food. A short intestine runs from the upper surface of the pyloric stomach to open at an anus in the center of the upper body.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Starfish|SCTID:280119005|BTO:0002121,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0008246,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,pyloric stomach,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The mouth of a starfish is located on the underside of the body, and opens through a short esophagus into firstly a cardiac stomach, and then, a second, pyloric stomach. Each arm also contains two pyloric caeca, long hollow tubes branching outwards from the pyloric stomach. Each pyloric caecum is lined by a series of digestive glands, which secrete digestive enzymes and absorb nutrients from the food. A short intestine runs from the upper surface of the pyloric stomach to open at an anus in the center of the upper body.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0008248,echinoderm pyloric cecum,pyloric cecum|pyloric caecum,The pyloric ceca (or digestive glands) and the cardiac stomach produce digestive enzymes in starfishes. Digested material is absorbed through the pyloric ceca for transport to the rest of the body. Each pyloric cecum extends the length of each arm.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,BTO:0002120,,,,,,,,,,,,,,,,,,,,,,,,pyloric cecum|pyloric caecum,,,,,UBERON:0008248,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,echinoderm pyloric cecum,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The pyloric ceca (or digestive glands) and the cardiac stomach produce digestive enzymes in starfishes. Digested material is absorbed through the pyloric ceca for transport to the rest of the body. Each pyloric cecum extends the length of each arm.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001064,travel mode,,A travel mode is a type of transportation which a given human has used while travelling on a particular trip.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001064,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,travel mode,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A travel mode is a type of transportation which a given human has used while travelling on a particular trip.,,,,,,,,
http://purl.obolibrary.org/obo/BTO_0002924,NHBE cell,,Normal human bronchial epithelial cell line.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,BTO:0002924,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/bto.owl,,,,,,,,,NHBE cell,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Normal human bronchial epithelial cell line.,,,,,,,,
http://purl.obolibrary.org/obo/OBA_2040157,age of onset of glioblastoma,age glioblastoma symptoms begin|age at onset of glioblastoma,The age at which glioblastoma manifestations first appear.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,age glioblastoma symptoms begin|age at onset of glioblastoma,,,,OBA:2040157,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age of onset of glioblastoma,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The age at which glioblastoma manifestations first appear.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000965,constructed swimming pool,pool,A construction which is designed to hold water in which humans may swim or perform other leisure activities.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,pool,wading pool|swimming pool|swimming bath|paddling pool,,,,ENVO:01000965,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,constructed swimming pool,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A construction which is designed to hold water in which humans may swim or perform other leisure activities.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0002819,specimen pad,,"A sample collection device consisting of a soft flexible, absorbent pad usually made from natural material such as gauze or cotton, used to absorb specimen fluid or particulate matter.",FALSE,,,,,,,swab|surface wipe|specimen sponge|sampling sponge|sample pad|polysponge|absorbant pad,,,,,,,,,,,,,,Derived from NCIT sponge definition.,,,,,specimen pad,,"An absorbent pad and its accompanying container are designed to provide safe storage and transport to various degrees for diagnostic and clinical samples, infectious and hazardous materials, chemicals, pharmaceuticals and environmental samples.",,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0002819,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,specimen pad,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://orcid.org/0000-0002-8844-9165,,,,"A sample collection device consisting of a soft flexible, absorbent pad usually made from natural material such as gauze or cotton, used to absorb specimen fluid or particulate matter.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490409,natural textile container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0409,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490409,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,natural textile container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490281,"glass container, coloured, strengthened",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0281,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490281,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"glass container, coloured, strengthened",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000186,beef hanger steak (raw),,A raw beef hanger steak.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000186,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef hanger steak (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef hanger steak.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_63284,mycinamicin IV,,"A mycinamicin composed of a 16-membered ring macrolactone core, an <em>N</em>,<em>N</em>-dimethylated deoxysugar desosamine and a 2,3-di-<em>O</em>-methylated 6-deoxysugar mycinose.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:63284,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,mycinamicin IV,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A mycinamicin composed of a 16-membered ring macrolactone core, an <em>N</em>,<em>N</em>-dimethylated deoxysugar desosamine and a 2,3-di-<em>O</em>-methylated 6-deoxysugar mycinose.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000032,beef sirloin tip side roast (raw),,A raw beef sirloin tip side roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000032,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef sirloin tip side roast (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef sirloin tip side roast.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_22213,acridines,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:22213,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,acridines,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100006,targeted surveillance strategy,non-random sampling,A surveillance sampling strategy in which an aspired outcome is explicity stated.,FALSE,,,,,,,Targeted surveillance (non-random sampling),,,,,,,,,,,,,,"Target"" (p.279) in Porta, M. (2014). A Dictionary of Epidemiology (6th ed.). Oxford University Press, Incorporated.",,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,non-random sampling,,,,GENEPIO:0100006,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,targeted surveillance strategy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A surveillance sampling strategy in which an aspired outcome is explicity stated.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03460774,magnesium added claim,,A claim that magnesium has been added to an edible product.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=H0774,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03460774,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,magnesium added claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A claim that magnesium has been added to an edible product.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C19160,Occupation or Discipline,Occupation or Discipline,A grouping of occupations and fields of study.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Occupation or Discipline,,,,NCIT:C19160,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Occupation or Discipline,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A grouping of occupations and fields of study.,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_1078021,Escherichia coli O113:H21,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,Escherichia coli O113:H21,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:1078021,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Escherichia coli O113:H21,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/IAO_0000100,data set,,A data item that is an aggregate of other data items of the same type that have something in common. Averages and distributions can be determined for data sets.,FALSE,,,,,,,data set,,,,,,,,,,,,,,group:OBI|OBI_0000042,,,,"2014-05-05: Data sets are aggregates and thus must include two or more data items. We have chosen not to add logical axioms to make this restriction.|2009/10/23 Alan Ruttenberg. The intention is that this term represent collections of like data. So this isn't for, e.g. the whole contents of a cel file, which includes parameters, metadata etc. This is more like java arrays of a certain rather specific type",homogenous data collection|data set,,,,,http://purl.obolibrary.org/obo/IAO_0000125,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,IAO:0000100,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl|http://purl.obolibrary.org/obo/iao.owl,,,,,,,,,homogenous data collection|data set,,,,,,,,,,,,,,,,,,,,,,,,,,,,person:Chris Stoeckert|person:Allyson Lister,,,,A data item that is an aggregate of other data items of the same type that have something in common. Averages and distributions can be determined for data sets.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510196,trans fat claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0196,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510196,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,trans fat claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03500010,food product contact surface,,The specific container or coating materials in direct contact with the food. [FDA CFSAN 1995],FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=N0010,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03500010,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food product contact surface,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The specific container or coating materials in direct contact with the food. [FDA CFSAN 1995],,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100587,PHA4GE SARS-CoV-2 specification,Public Health Alliance for Genomic Epidemiology severe acute respiratory syndrome coronavirus 2 specification|Public Health Alliance for Genomic Epidemiology SARS-CoV-2 specification,A data specification established for use by The Public Health Alliance for Genomic Epidemiology (PHA4GE) project for SARS-CoV-2 contextual data (metadata) harmonization and curation across data providers.,FALSE,,,,,,,PHA4GE SARS-CoV-2 contextual data specification,,,,,,,,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,Public Health Alliance for Genomic Epidemiology severe acute respiratory syndrome coronavirus 2 specification|Public Health Alliance for Genomic Epidemiology SARS-CoV-2 specification,,,,GENEPIO:0100587,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788,2022-12-09T20:18:38.91Z,,,,,,,,,,,,,,,,,,,PHA4GE SARS-CoV-2 specification,,,,,,,,,,,,,,,,,,,,,,GitHub: https://github.com/pha4ge/SARS-CoV-2-Contextual-Data-Specification | Manuscript: https://doi.org/10.1093/gigascience/giac003,,,,,,,,,,A data specification established for use by The Public Health Alliance for Genomic Epidemiology (PHA4GE) project for SARS-CoV-2 contextual data (metadata) harmonization and curation across data providers.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C15675,Adjuvant Therapy,adjuvant therapy|adjunctive therapy|adjunct therapy|Adjuvant Therapy|AJ-Adjuvant Therapy,Any therapy that is administered to augment or stimulate other treatment modalities or to minimize or prevent disease recurrence subsequent to the main treatment plan.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,adjuvant therapy|adjunctive therapy|adjunct therapy|Adjuvant Therapy|AJ-Adjuvant Therapy,,,,NCIT:C15675,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Adjuvant Therapy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any therapy that is administered to augment or stimulate other treatment modalities or to minimize or prevent disease recurrence subsequent to the main treatment plan.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000306,pork tenderloin,,"The whole tenderloin. Because of its anatomical location, the tenderloin is the least exercised muscle in the carcass, thus the name “tender” loin. The tenderloin is located underneath the Finger bones and the Hipbone in the Loin.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000306,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pork tenderloin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The whole tenderloin. Because of its anatomical location, the tenderloin is the least exercised muscle in the carcass, thus the name “tender” loin. The tenderloin is located underneath the Finger bones and the Hipbone in the Loin.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C204466,Body Fluid Specimen,Body Fluid Specimen|Body Fluid Sample,A biospecimen that consists of a body fluid.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Body Fluid Specimen|Body Fluid Sample,,,,NCIT:C204466,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Body Fluid Specimen,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A biospecimen that consists of a body fluid.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_2123,tularemia,,"A primary bacterial infectious disease that has_material_basis_in Francisella tularensis, which is transmitted by dog tick bite (Dermacentor variabilis), transmitted by deer flies (Chrysops sp) or transmitted by contact with infected animal tissues.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:2123,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,tularemia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A primary bacterial infectious disease that has_material_basis_in Francisella tularensis, which is transmitted by dog tick bite (Dermacentor variabilis), transmitted by deer flies (Chrysops sp) or transmitted by contact with infected animal tissues.",,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000078,farm,agricultural site,"An area of land which is used for the cultivation of crops or grazing of livestock, including any agricultural constructions therein.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Farm|TGN:54011|Geonames:S.RNCH|Geonames:S.FRMS|Geonames:S.FRM|FTT:69|FTT:59|FTT:58|FTT:45,,,,,,,,,,,,,,,,,,,,,,,,agricultural site,FARM,,,,ENVO:00000078,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,farm,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An area of land which is used for the cultivation of crops or grazing of livestock, including any agricultural constructions therein.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03309517,herring fillet (raw),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://bioregistry.io/reference/siren:F9517,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03309517,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,herring fillet (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C25717,Vital Status,vital_status|vital status|Vital_Status|Vital Status (at date of last contact)|Vital Status|Survival Status|SURVSTAT,The state or condition of being living or deceased; also includes the case where the vital status is unknown.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,vital_status|vital status|Vital_Status|Vital Status (at date of last contact)|Vital Status|Survival Status|SURVSTAT,,,,NCIT:C25717,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Vital Status,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The state or condition of being living or deceased; also includes the case where the vital status is unknown.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00001549,Kingdom of the Netherlands,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,INSDC:country:netherlands,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00001549,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Kingdom of the Netherlands,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01001873,hatchery,,A construction in which eggs are hatched under artificial conditions.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01001873,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,hatchery,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A construction in which eggs are hatched under artificial conditions.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001637,obsolete: specimen source material category,,This is the scientific role or category that the subject organism or material has with respect to an investigation.,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001637,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: specimen source material category,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,http://purl.obolibrary.org/obo/GENEPIO_0001237,,,This is the scientific role or category that the subject organism or material has with respect to an investigation.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0033589,Flatulence,,Passage of excessive amounts of gas and the feeling of abdominal fullness and bloating.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0033589,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Flatulence,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Passage of excessive amounts of gas and the feeling of abdominal fullness and bloating.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000062,beef under blade,,A meat cut that is the flatter portion of the Chuck Roll and is under the Chuck Eye Roll.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000062,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef under blade,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A meat cut that is the flatter portion of the Chuck Roll and is under the Chuck Eye Roll.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C112863,Late Fetal Death,Late Fetal Death,"Death of a fetus at 16 weeks, 0 days to 19 weeks, 6 days of gestation.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Late Fetal Death,,,,NCIT:C112863,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Late Fetal Death,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Death of a fetus at 16 weeks, 0 days to 19 weeks, 6 days of gestation.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C112862,Early Fetal Death,Early Fetal Death,"Death of a fetus at 10 weeks, 0 days to 15 weeks, 6 days of gestation.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Early Fetal Death,,,,NCIT:C112862,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Early Fetal Death,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Death of a fetus at 10 weeks, 0 days to 15 weeks, 6 days of gestation.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100941,grab sampling device,,A specimen collection device which is used to collect a single discrete samples from a specific location.,FALSE,,,,,,,grab sampler,,,,,,,"It typically consists of a container or scoop that can be manually triggered to open and close, allowing the user to ""grab"" a representative sample at a specific depth or location. Represents a “snapshot” of conditions at the moment of sampling, commonly used in water, wastewater and surface environmental sampling and alone does not account for temporal or spatial variability.",,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100941,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-11-20T16:24:25Z,,,,,,,,,,,,,,,,,,,grab sampling device,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A specimen collection device which is used to collect a single discrete samples from a specific location.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03430148,divided into quarters,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=E0148,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03430148,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,divided into quarters,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0002424,oral epithelium,epithelium of oral mucosa|epithelium of mucosa of mouth,"An epithelium that is part of the mouth and lines the oral cavity, typically stratified squamous, and may be para-, ortho- or non- keratinized. Primary barrier between oral environment and deeper tissues.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ZFA:0000816|XAO:0003201|VHOG:0000187|UMLS:C1709332|TAO:0000816|NCIT:C49595|MA:0000344|FMA:265152|EMAPA:26942|EMAPA:16839|EHDAA:2187|EHDAA2:0001325|CALOHA:TS-0715|BTO:0001775|AAO:0010357,,,,,,,,,,,,,,,,,,,,,,,,,epithelium of oral mucosa|epithelium of mucosa of mouth,,,,UBERON:0002424,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,oral epithelium,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An epithelium that is part of the mouth and lines the oral cavity, typically stratified squamous, and may be para-, ortho- or non- keratinized. Primary barrier between oral environment and deeper tissues.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0002429,cervical lymph node,lymph node of neck,"Cervical lymph nodes are lymph nodes found in the neck. [WP,unvetted].",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Cervical_lymph_nodes|UMLS:C0588054|SCTID:181757009|NCIT:C32298|MA:0000736|FMA:61213,,,,,,,,,,,,,,,,,,,,,,,,,lymph node of neck,,,,UBERON:0002429,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,cervical lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Cervical lymph nodes are lymph nodes found in the neck. [WP,unvetted].",,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000671,hazard rate,,"A conditional instantaneous rate in which the numerator represents an incidence conditioned on survival to a specified time, and the denominator represents a time interval with a duration approaching zero.",FALSE,,,,,,,instantaneous hazard rate|hazard function|hazard,,,,,,,,,,,,,,SEVCO group,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000671,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,hazard rate,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Harold Lehmann, Kenneth Wilkins, Joanne Dehnbostel, Brian S. Alper",,,,"A conditional instantaneous rate in which the numerator represents an incidence conditioned on survival to a specified time, and the denominator represents a time interval with a duration approaching zero.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03460195,potassium added claim,,A claim that potassium has been added to an edible product.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=H0195,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03460195,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,potassium added claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A claim that potassium has been added to an edible product.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00004308,chicken breast cutlet,,A cutlet made from chicken breast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00004308,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,chicken breast cutlet,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A cutlet made from chicken breast.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03308071,"fish fillet (with skin, raw, breaded, frozen)",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://bioregistry.io/reference/siren:F8071,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03308071,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"fish fillet (with skin, raw, breaded, frozen)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000065,Qualicon (DuPont) RiboPrinter Microbial Characterization System,,A device that generates an automated genetic fingerprint of a bacterium from a bacterial suspension.,FALSE,,,,,,,,,,,,,,"an automated system that takes a purified bacterial suspension, lyses the cells, extracts the DNA, restriction endonuclease digests the DNA, separates the digest on a gel, transfers the DNA bands to a membrane, probes the bands with non-radioisotope-labeled, 5S-16S-23S rRNA-specific probes (Southern hybridization), photographs the membrane, and finally compares the bar code-like pattern to databases in order to identify the genus and species.",,,,,,,http://www.ncbi.nlm.nih.gov/pmc/articles/PMC92620/,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000065,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,,,,,,,Qualicon (DuPont) RiboPrinter Microbial Characterization System,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A device that generates an automated genetic fingerprint of a bacterium from a bacterial suspension.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_33261,organosulfur compound,,An organosulfur compound is a compound containing at least one carbon-sulfur bond.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:25714|CHEBI:23010,,,,,,CHEBI:33261,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,organosulfur compound,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An organosulfur compound is a compound containing at least one carbon-sulfur bond.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020430,piece of turkey (with skin),,A piece of turkey that contains skin.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020430,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of turkey (with skin),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A piece of turkey that contains skin.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510219,food allergen labelling about soybeans and products thereof,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0219,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510219,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food allergen labelling about soybeans and products thereof,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000928,fish processing building,,A building in which fish are subject to a series of operations to prepare them for human consumption.,FALSE,,,,,,,,,,,,,,"This is a kind of fish processing facility. Facilities need not be buildings, factory ships may be considered fish processing facilities.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01000928,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,fish processing building,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A building in which fish are subject to a series of operations to prepare them for human consumption.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000463,beef primal cut (raw),,A raw beef primal cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000463,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef primal cut (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef primal cut.,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000354,Kgatla,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000354,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Kgatla,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000358,Nubian Northern,,A Northern African population with a population size of 1.7 million,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000358,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Nubian Northern,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Northern African population with a population size of 1.7 million,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000355,Andalusian,,Descendants of Andalusians people,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000355,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Andalusian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Descendants of Andalusians people,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000352,North Ndebele,,A Ndebele population with a population size of 1.5 million,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000352,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,North Ndebele,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Ndebele population with a population size of 1.5 million,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000356,Berber Northern,,A Northern African population with a population size of 38 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000356,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Berber Northern,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Northern African population with a population size of 38 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000359,Algerian Berber,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000359,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Algerian Berber,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000350,Ndebele,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000350,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Ndebele,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000353,South Ndebele,,A Ndebele population with a population size of 0.7 million,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000353,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,South Ndebele,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Ndebele population with a population size of 0.7 million,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000351,Swazi,,A Nguni population with a population size of 2.3 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000351,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Swazi,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Nguni population with a population size of 2.3 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000357,Copt,,"A Eastern African, Northern African population with a population size of 20 millions",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000357,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Copt,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A Eastern African, Northern African population with a population size of 20 millions",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C89084,Undetermined,Undetermined|UNDETERMINED,A term referring to the lack of definitive clinical or pathologic criteria for a tumor to predict its clinical course or to classify it as benign or malignant.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Undetermined|UNDETERMINED,,,,NCIT:C89084,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Undetermined,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A term referring to the lack of definitive clinical or pathologic criteria for a tumor to predict its clinical course or to classify it as benign or malignant.,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000552,Kpelle,,The Kpelle are a Mande Western population with a population size of 2 million.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000552,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Kpelle|Kpelle,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The Kpelle are a Mande Western population with a population size of 2 million.,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000553,Kuranko,,A Mande Western population with a population size of > 2 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000553,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Kuranko|Kuranko,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Mande Western population with a population size of > 2 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000559,Oron,,A Western African population with a population size of 1.407 million,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000559,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Oron|Oron,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Western African population with a population size of 1.407 million,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000555,Mano,,A Mande Western population with a population size of 498000,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000555,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Mano|Mano,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Mande Western population with a population size of 498000,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000550,Jakhanke,,A Mande Western population with a population size of 115200,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000550,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Jakhanke|Jakhanke,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Mande Western population with a population size of 115200,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000558,Mankanya,,A Western African population with a population size of 106900,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000558,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Mankanya|Mankanya,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Western African population with a population size of 106900,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000554,Loko,,A Mande Western population with a population size of 165692,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000554,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Loko|Loko,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Mande Western population with a population size of 165692,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000557,Yalunka,,A Mande Western population with a population size of 206000,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000557,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Yalunka|Yalunka,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Mande Western population with a population size of 206000,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000556,Vai,,A Mande Western population with a population size of 240000,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000556,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Vai|Vai,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Mande Western population with a population size of 240000,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000551,Kono,,A Mande Western population with a population size of 363000,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000551,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Kono|Kono,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Mande Western population with a population size of 363000,,,,,,,,
http://purl.obolibrary.org/obo/HP_0006536,Airway obstruction,Pulmonary obstruction|Obstructive lung disease,Obstruction of conducting airways of the lung.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0600260,,,,,,,,,,,,,,,,,,,,,,,HP:0006512,,Pulmonary obstruction|Obstructive lung disease,,,,HP:0006536,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Airway obstruction,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Obstruction of conducting airways of the lung.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0006530,Abnormal pulmonary interstitial morphology,Interstitial pulmonary disease|Interstitial lung disease|Abnormality in area between air sacs in lung|Abnormal lung parenchyma morphology,Abnormality of the lung parenchyma extending to the pulmonary interstitium and leading to diffuse pulmonary fibrosis.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0206062|SNOMEDCT_US:233703007,,,,,,,,,,,,,,,,,,,,,,,HP:0006547|HP:0006513,,Interstitial pulmonary disease|Interstitial lung disease|Abnormality in area between air sacs in lung|Abnormal lung parenchyma morphology,,,,HP:0006530,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal pulmonary interstitial morphology,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Abnormality of the lung parenchyma extending to the pulmonary interstitium and leading to diffuse pulmonary fibrosis.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001426,container record,,"A container id is an identifier that refers to a container object about a patient specimen. Container ids are referenced in clinical patient records reported to be suspect, or lab test results.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001426,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,container record,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"A container id is an identifier that refers to a container object about a patient specimen. Container ids are referenced in clinical patient records reported to be suspect, or lab test results.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100512,AMR testing by laboratory name,antimicrobial resistance testing by laboratory name|AMR_testing_by_laboratory_name|AMR testing by laboratory name,A data field which describes the name of the lab within the organization that performed the antimicrobial resistance (AMR) testing.,FALSE,,,,,,,PCDS:amr_testing_by_laboratory_name,,,,,,,"PCDS: Provide the name of the specific laboratory that performed the AMR testing (avoid abbreviations). If the information is unknown or cannot be provided, leave blank or provide a null value.",,,,,,,,,,,,,,PCDS: Topp Lab,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,antimicrobial resistance testing by laboratory name|AMR_testing_by_laboratory_name|AMR testing by laboratory name,antimicrobial resistance testing by laboratory name slot|antimicrobial resistance testing by laboratory name field|AMR testing by laboratory name slot,,,,GENEPIO:0100512,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-12-22T00:55:53.808Z,,,,,,,,,,,,,,,,,,,AMR testing by laboratory name,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the name of the lab within the organization that performed the antimicrobial resistance (AMR) testing.,,PCDS: The name of the lab within the organization that performed the antimicrobial resistance testing.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000027,specimen source context,,"Describes the physical, environmental and/or local geographical source of the biological sample from which the sample was derived.",FALSE,,,,,,,,,,,,,,,,,,,,,NCBI Biosample,,,,,,,"sediment, chicken feces, cheese",,http://purl.obolibrary.org/obo/GENEPIO_0002174,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000027,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,specimen source context,,,,,Environmental Isolate,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"Describes the physical, environmental and/or local geographical source of the biological sample from which the sample was derived.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C97331,Intellectual Property,Intellectual Property|Intellectual Product,"Creations of the mind, such as those created by musicians, authors, artists, and inventors.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Intellectual Property|Intellectual Product,,,,NCIT:C97331,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Intellectual Property,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Creations of the mind, such as those created by musicians, authors, artists, and inventors.",,,,,,,,
http://purl.obolibrary.org/obo/OBI_0001629,grant identifier,,A CRID symbol used to identify a grant.,FALSE,,,,,,,,,,,,,,,,,,,,,NIAID GSCID-BRC metadata working group,,,,,grant identifier,,,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0001629,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,grant identifier,,,,,,,grant ID,,,,,,,,,,,,,,,,,,,,,"Person: Chris Stoeckert, Jie Zheng",,,,A CRID symbol used to identify a grant.,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_9031,Gallus gallus,,,FALSE,,,,,,,chickens|chicken|bantam|Gallus domesticus,,,,,,,,,,,,,,,,,,,Gallus gallus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:9031,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Gallus gallus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000443,bison top sirloin steak,,A steak cut from the bison top sirloin butt.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000443,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,bison top sirloin steak,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A steak cut from the bison top sirloin butt.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530050,fruit ripeness,,A food plant physical characteristic about the ripening stage of development of a fruit.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0050,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530050,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,fruit ripeness,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A food plant physical characteristic about the ripening stage of development of a fruit.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510127,kosher claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0127,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510127,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,kosher claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100454,microbiological method,microbiological method,"A data field which describes the laboratory method used to grow, prepare, and/or isolate the microbial isolate.",FALSE,,,,,,,PCDS:microbiological_method,,,,,,,PCDS: Provide the name and version number of the microbiological method. The ID of the method is also acceptable if the ID can be linked to the laboratory that created the procedure.,,,,,,,,,,,,,,PCDS: MFHPB-30,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,microbiological method,microbiological method slot,,,,GENEPIO:0100454,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,microbiological method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A data field which describes the laboratory method used to grow, prepare, and/or isolate the microbial isolate.",,"PCDS: The laboratory method used to grow, prepare, and/or isolate the microbial isolate.",,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000128,epidemiology contact network model,,An epidemiology contact network model is a definition of the information necessary to connect pathogen transmission patterns between individuals or animals in connection with an outbreak investigation.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000128,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,epidemiology contact network model,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,An epidemiology contact network model is a definition of the information necessary to connect pathogen transmission patterns between individuals or animals in connection with an outbreak investigation.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100789,chemical oxygen demand (COD) measurement unit,chemical oxygen demand (COD) measurement unit,An environmental data field which describes the units associated with a value from a chemical oxygen demand (COD) test.,FALSE,,,,,,,PCDS:chemical_oxygen_demand_cod_measurement_unit,,,,,,,PCDS: Provide the units of the COD test result.,,,,,,,,,,,,,,PCDS: milligram per liter (mg/L),,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,chemical oxygen demand (COD) measurement unit,chemical oxygen demand (COD) measurement unit slot,,,,GENEPIO:0100789,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,chemical oxygen demand (COD) measurement unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the units associated with a value from a chemical oxygen demand (COD) test.,,PCDS: The units associated with a value from a chemical oxygen demand (COD) test.,,,,,,
http://purl.obolibrary.org/obo/OBI_0000658,data representational model,,An information content entity representing the relationships between data items.,FALSE,,,,,,,data structure specification|data structure,,,,,,,,,,,,,2009-02-28: work on this term has been finalized during the OBI workshop winter 2009,GROUP: OBI,,,,,data representational model,,"protein interaction network|phylogenetic tree|gene regulatory graph model|The Cytoscape application is commonly used to visualize data representational models about biological entities. It can read and write several serializations of data representational models, including BioPAX.",,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0000658,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,data representational model,,,,,,,,,,,,,,,,,,,,,,,,,,,,Melanie Courtot,,,,An information content entity representing the relationships between data items.,,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000415,accuracy,,"in the context of binary classification, accuracy is defined as the proportion of true results (both true positives and true negatives) to the total number of cases examined (the sum of true positive, true negative, false positive and false negative).

It can be understood as a measure of the proximity of measurement results to the true value.

Accuracy is a metric used in the context of classification tasks to evaluate the proportion of correctly predicted instances among the total instances.

Key Points:

Use Case: Classification performance evaluation.
Metric: Measures the proportion of correct predictions.
Interpretation: Higher values indicate better classification performance.",FALSE,,,,,,,,,,,,,,,,,,,,,"adapted from wikipedia:
https://en.wikipedia.org/wiki/Accuracy_and_precision#In_binary_classification

last accessed: May 2016

adapted from ChatGPT using the following prompt: [what is the difference between ""Rand Index"" and ""Accuracy"" in statistics]

last accessed: July 2024",,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000415,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,accuracy,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra,,,,"in the context of binary classification, accuracy is defined as the proportion of true results (both true positives and true negatives) to the total number of cases examined (the sum of true positive, true negative, false positive and false negative).

It can be understood as a measure of the proximity of measurement results to the true value.

Accuracy is a metric used in the context of classification tasks to evaluate the proportion of correctly predicted instances among the total instances.

Key Points:

Use Case: Classification performance evaluation.
Metric: Measures the proportion of correct predictions.
Interpretation: Higher values indicate better classification performance.",,,,,,,,
http://purl.obolibrary.org/obo/PATO_0001828,male pseudohermaphrodite,,A biological sex quality inhering in an individual or a population by virtue of having internal reproductive organs of male and external sexual characteristics of female.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PATO:0001828,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/pato.owl,http://purl.oboInOwllibrary.org/oboInOwl/pato#value_slim,,,,,,,,male pseudohermaphrodite,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A biological sex quality inhering in an individual or a population by virtue of having internal reproductive organs of male and external sexual characteristics of female.,,,,,,,,
http://purl.obolibrary.org/obo/PATO_0001827,pseudohermaphrodite,,A biological sex quality inhering in an individual or a population by virtue of having internal reproductive organs of one sex and external sexual characteristics of the other sex.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,This value is not present in NCBI BioSample host sex.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PATO:0001827,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/pato.owl,http://purl.oboInOwllibrary.org/oboInOwl/pato#value_slim,,,,,,,,pseudohermaphrodite,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A biological sex quality inhering in an individual or a population by virtue of having internal reproductive organs of one sex and external sexual characteristics of the other sex.,,,,,,,,
http://purl.obolibrary.org/obo/PATO_0001829,female pseudohermaphrodite,,A biological sex quality inhering in an individual or a population by virtue of having internal reproductive organs of female and external sexual characteristics of male.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PATO:0001829,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/pato.owl,http://purl.oboInOwllibrary.org/oboInOwl/pato#value_slim,,,,,,,,female pseudohermaphrodite,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A biological sex quality inhering in an individual or a population by virtue of having internal reproductive organs of female and external sexual characteristics of male.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_8200,tertiary syphilis,,"A syphilis that is characterized as the third stage of syphilis that develops after the disappearance of the secondary symptoms and is marked by ulcers and gummas under the skin and commonly by involvement of the skeletal, cardiovascular, and nervous systems.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:8200,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,tertiary syphilis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A syphilis that is characterized as the third stage of syphilis that develops after the disappearance of the secondary symptoms and is marked by ulcers and gummas under the skin and commonly by involvement of the skeletal, cardiovascular, and nervous systems.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_9016,arsphenamine,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:9016,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,arsphenamine,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03480016,packed in vegetable juice,,Vegetable juice which is used as a packing medium for food material.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=K0016,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03480016,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,packed in vegetable juice,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Vegetable juice which is used as a packing medium for food material.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02010016,animal fillet,,A butchery cut of animal that is typically boneless.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02010016,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,animal fillet,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A butchery cut of animal that is typically boneless.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03500042,aluminum surface,,A surface made out of aluminum metal,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=N0042,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03500042,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,aluminum surface,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A surface made out of aluminum metal,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100415,at-home community healthcare exposure process,,"A process occuring within or in the vicinty of a the individual home where the patient or client is living and health care or supportive care is being being delivered, as opposed to care provided in group accommodations like clinics or nursing home.",FALSE,,,,,,,Community Healthcare (At-Home) Setting,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100415,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-01-23T00:42:19.315Z,,,,,,,,,,,,,,,,,,,at-home community healthcare exposure process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A process occuring within or in the vicinty of a the individual home where the patient or client is living and health care or supportive care is being being delivered, as opposed to care provided in group accommodations like clinics or nursing home.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000113,beef chuck neck roast,,A beef cut that is derived from the anterior end of the untrimmed chuck roll.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000113,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef chuck neck roast,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A beef cut that is derived from the anterior end of the untrimmed chuck roll.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490194,"can, bottle or jar",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0194,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490194,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"can, bottle or jar",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530026,short loin,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0026,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530026,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,short loin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C49643,Infant And Toddler,Infant And Toddler (28 Days to 23 Months)|Infant And Toddler,An age group comprised of individuals between 28 days to 23 months of age.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Infant And Toddler (28 Days to 23 Months)|Infant And Toddler,,,,NCIT:C49643,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Infant And Toddler,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An age group comprised of individuals between 28 days to 23 months of age.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C150895,Swabbed Material,Swabbed Material|SWABBED MATERIAL,"A heterogeneous and variable aggregate of body fluids, tissues, cells, microorganisms, and other materials that are collected from a swab biospecimen collection procedure.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Swabbed Material|SWABBED MATERIAL,,,,NCIT:C150895,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Swabbed Material,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A heterogeneous and variable aggregate of body fluids, tissues, cells, microorganisms, and other materials that are collected from a swab biospecimen collection procedure.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020981,beef chop (boneless),,A boneless beef chop.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020981,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef chop (boneless),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A boneless beef chop.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0002167,Abnormal speech pattern,Abnormality of speech or vocalization|Abnormal vocalization|Abnormal vocalisation|Abnormal speech,An abnormality in the sound (volume) or cadence (rate) of speech.,FALSE,,,,,,,,,,,,,,"The term Abnormal speech pattern includes both psychiatric and neurological conditions that affect the rate, rhythm, and volume of expressed speech.",,,,,,,,,,,,,,,,,,UMLS:C0037822,,,,,,,,,,,,,,,,,,,,,,,,,Abnormality of speech or vocalization|Abnormal vocalization|Abnormal vocalisation|Abnormal speech,,,,HP:0002167,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal speech pattern,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An abnormality in the sound (volume) or cadence (rate) of speech.,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_7215,"Drosophila <flies,genus>",,,FALSE,,,,,,,fruit fly|fruit flies|Drosophila,,,,,,,,,,,,,,,,,,,"Drosophila <flies,genus>",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:7215,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,"Drosophila <flies,genus>",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_03501211,door handle,door knob,A manufactured product consisting of a handle used to open or close a door.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,door knob,,,,ENVO:03501211,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,door handle,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A manufactured product consisting of a handle used to open or close a door.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001411,destination of most recent travel city,destination of most recent travel (city),A geographical data field which describes the name of the city that was the destination of most recent travel.,FALSE,,,,,,,PCDS:destination_of_most_recent_travel_city,,,,,,,PCDS: Provide the name of the city that the host travelled to. Use this look-up service to identify the standardized term: https://www.ebi.ac.uk/ols/ontologies/gaz,,,,,,,,,,,,,,PCDS: New York City,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,destination of most recent travel (city),destination of most recent travel (city) slot|destination city of most recent travel slot|destination city of most recent travel field,,,,GENEPIO:0001411,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,destination of most recent travel city,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A geographical data field which describes the name of the city that was the destination of most recent travel.,,PCDS: The name of the city that was the destination of most recent travel.,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510192,"toddler as food consumer, 12 months and onwards",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0192,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510192,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"toddler as food consumer, 12 months and onwards",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/BTO_0001865,PK-15 cell,,Pig kidney cell line. Original line: PK-2a; contains type C viruses. Morphology: epithelial-like.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,BTO:0001865,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/bto.owl,,,,,,,,,PK-15 cell,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Pig kidney cell line. Original line: PK-2a; contains type C viruses. Morphology: epithelial-like.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001192,analytic datum,,Judgements here are marked down after an agent's (doctor/veterenary) analysis of symptoms.,FALSE,,,,,,,,,,,,,,Judgements here are marked down after an agent's (doctor/veterenary) analysis of symptoms.,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001192,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,analytic datum,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001398,host subject id,host subject identifier|host subject ID,A host data field which describes the unique identifier by which each host can be referred to.,FALSE,,,,,,,PCDS:host_subject_id,,,,,,,"PCDS: Provide the host identifier. Should be a unique, user-defined identifier.",,,,,,,,,,,,,,PCDS: BCxy123,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,host subject identifier|host subject ID,host subject identifier slot|host subject identifier field|host subject ID slot,,,,GENEPIO:0001398,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,host subject id,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A host data field which describes the unique identifier by which each host can be referred to.,,PCDS: A unique identifier by which each host can be referred to.,,,,,,
http://purl.obolibrary.org/obo/NCIT_C43359,Group,Panel|Group,Any number of entities (members) considered as a unit.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Panel|Group,,,,NCIT:C43359,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Group,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any number of entities (members) considered as a unit.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0033151,Abnormal pharynx morphology,,A structural anomaly of the pharynx.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0033151,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal pharynx morphology,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A structural anomaly of the pharynx.,,,,,,,,
http://purl.obolibrary.org/obo/BFO_0000030,object,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,BFO:0000030,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,object,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C96572,Biological Father,"Natural Father|Father|FATHER, BIOLOGICAL|Biological Father",A male who contributes to the genetic makeup of his offspring through the fertilization of an ovum by his sperm.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Natural Father|Father|FATHER, BIOLOGICAL|Biological Father",,,,NCIT:C96572,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Biological Father,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A male who contributes to the genetic makeup of his offspring through the fertilization of an ovum by his sperm.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000041,total phosphorous concentration,,An environmental datum which describes the total phosphorus concentration in a sample.,FALSE,,,,,,,,,,,,,,"Total phosphorus concentration, calculated by: total phosphorus = total dissolved phosphorus + particulate phosphorus. Can also be measured without filtering, reported as phosphorus.",,,,,,,GROUP: MIxS enviro package,,,,,,,micromole per liter,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000041,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,,,,,,,total phosphorous concentration,,,,,Environmental Isolate,,,,,,,,,,,,,,,,,,,,,,Total phosphorous,,,GROUP: MIxS,,An environmental datum which describes the total phosphorus concentration in a sample.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_25661,oleandomycins,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:25661,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,oleandomycins,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510028,pet cat as consumer,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0028,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510028,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pet cat as consumer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_03501354,steel,,A manufactured product which is an alloy of iron and which typically contains a few tenths of a percent of carbon.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:03501354,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,steel,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A manufactured product which is an alloy of iron and which typically contains a few tenths of a percent of carbon.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002003,draft tuberculosis - case clinical presentation,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002003,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,draft tuberculosis - case clinical presentation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000611,measure of correlation,,"measure of correlation is a measure of association between ordinal or continuous variables.

A value of 0 means no association. 
A positive value means a positive association (as one variable increases, the other variable increases). 
A negative value means a negative association (as one variable increases, the other variable decreases).
For correlation coefficients, the possible values range from +1 (perfect positive association) to -1 (perfect negative association)",FALSE,,,,,,,correlation,,,,,,,,,,,,,,COKA group,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000611,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,measure of correlation,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Brian S. Alper, Joanne Dehnbostel, Muhammad Afzal, Yuan Gao, Kenneth Wilkins, Harold Lehmann",,,,"measure of correlation is a measure of association between ordinal or continuous variables.

A value of 0 means no association. 
A positive value means a positive association (as one variable increases, the other variable increases). 
A negative value means a negative association (as one variable increases, the other variable decreases).
For correlation coefficients, the possible values range from +1 (perfect positive association) to -1 (perfect negative association)",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_26788,streptomycins,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:26788,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,streptomycins,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0009061,cystic fibrosis,"pseudomonas aeruginosa, susceptibility to chronic infection by, in cystic fibrosis|mucoviscidosis|cystic fibrosis lung disease, modifier of|cystic fibrosis|CF","Autosomal recessive disorder caused by pathogenic variants in the CFTR gene (cystic fibrosis transmembrane conductance regulator), which encodes a chloride and bicarbonate channel expressed in epithelial cells, and follow the diagnosis criteria. Diagnosis requires evidence of CFTR dysfunction, defined as a sweat chloride concentration of 60 mmol/L or greater, or identification of two CF-causing CFTR pathogenic variants, or an abnormal nasal potential difference measurement. CF is a progressive, multi-organ disease characterized by chronic obstructive lung disease with recurrent infections, exocrine pancreatic insufficiency, intestinal obstruction (including meconium ileus in neonates), male infertility due to obstructive azoospermia, hepatobiliary complications, and elevated sweat chloride concentrations.",FALSE,,,,,,,,,,,,,,"Diagnosis of CF requires **one clinical indicator** (positive newborn screen, symptoms consistent with CF, or family history) **plus one functional/genetic indicator**:
1. Sweat chloride concentration ≥60 mmol/L, or
2. Identification of two CF-causing CFTR pathogenic variants, or
3. Abnormal nasal potential difference measurement

See also CFTR-related disorders (MONDO:7770004), which involve CFTR dysfunction limited to a single organ system and do not meet CF diagnostic criteria.",,,,,,,,,,,,,,,,,,icd11.foundation:514403112|UMLS:C0010674|SCTID:190905008|Orphanet:586|OMIM:219700|NORD:1026|NCIT:C2975|NANDO:2200205|NANDO:2100035|NANDO:1201021|NANDO:1200922|MedDRA:10011762|MESH:D003550|MEDGEN:41393|ICD9:277.0|ICD10WHO:E84|ICD10CM:E84|GARD:0006233|DOID:1485,,,,,,,,,,,,,,,,,,,,,,,,,"pseudomonas aeruginosa, susceptibility to chronic infection by, in cystic fibrosis|mucoviscidosis|cystic fibrosis lung disease, modifier of|cystic fibrosis|CF",,,,MONDO:0009061,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#rare|http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar|http://purl.oboInOwllibrary.org/oboInOwl/mondo#orphanet_rare|http://purl.oboInOwllibrary.org/oboInOwl/mondo#ordo_disorder|http://purl.oboInOwllibrary.org/oboInOwl/mondo#omim_susceptibility|http://purl.oboInOwllibrary.org/oboInOwl/mondo#nord_rare|http://purl.oboInOwllibrary.org/oboInOwl/mondo#gard_rare|http://purl.oboInOwllibrary.org/oboInOwl/mondo#doid_rare,,,,,,,,cystic fibrosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Autosomal recessive disorder caused by pathogenic variants in the CFTR gene (cystic fibrosis transmembrane conductance regulator), which encodes a chloride and bicarbonate channel expressed in epithelial cells, and follow the diagnosis criteria. Diagnosis requires evidence of CFTR dysfunction, defined as a sweat chloride concentration of 60 mmol/L or greater, or identification of two CF-causing CFTR pathogenic variants, or an abnormal nasal potential difference measurement. CF is a progressive, multi-organ disease characterized by chronic obstructive lung disease with recurrent infections, exocrine pancreatic insufficiency, intestinal obstruction (including meconium ileus in neonates), male infertility due to obstructive azoospermia, hepatobiliary complications, and elevated sweat chloride concentrations.",,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_1095706,Escherichia coli O18,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,Escherichia coli O18,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:1095706,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Escherichia coli O18,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000498,pole,,"A solid, cylindrical object or column with its length greater than its diameter.",FALSE,,,,,,,,,,,,,,"This was created in response to a user request, but it is an odd class in that it specifies a shape rather than a particular material entity. It may, therefore, be deprecated when more meaningful or sensible alternatives become apparent.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01000498,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,pole,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A solid, cylindrical object or column with its length greater than its diameter.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_26512,quinolinemonocarboxylic acid,,Any aromatic carboxylic acid that contains a quinoline moiety that is substituted by one carboxy substituent.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:26512,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,quinolinemonocarboxylic acid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any aromatic carboxylic acid that contains a quinoline moiety that is substituted by one carboxy substituent.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_9531,latent syphilis,,A syphilis that is characterized as having serologic proof of infection without signs or symptoms of disease.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:9531,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,latent syphilis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A syphilis that is characterized as having serologic proof of infection without signs or symptoms of disease.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_1019,osteomyelitis,,A bone inflammation disease that has_material_basis_in infection located_in bone or located_in bone marrow.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:1019,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,osteomyelitis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A bone inflammation disease that has_material_basis_in infection located_in bone or located_in bone marrow.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001685,other antigen specification,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001685,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,other antigen specification,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/CHEBI_59132,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0011057,cerebrovascular disorder,stroke|cerebrovascular accident|cerebral infarction|CVA (cerebral vascular accident)|CVA,"A disorder resulting from inadequate blood flow in the vessels that supply the brain. Representative examples include cerebrovascular ischemia, cerebral embolism, and cerebral infarction.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,icd11.foundation:843843448|UMLS:C0007820|SCTID:62914000|NCIT:C2938|MESH:D002561|MEDGEN:858|ICD9:437.9|ICD9:437.8|ICD9:434.91|ICD9:430-438|ICD10CM:I60-I69|EFO:0003763|DOID:6713,,,,,,,,,,,,,,,,,,,,,,,,,cerebrovascular disorder|cerebrovascular disease,stroke|cerebrovascular accident|cerebral infarction|CVA (cerebral vascular accident)|CVA,,,MONDO:0011057,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,cerebrovascular disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A disorder resulting from inadequate blood flow in the vessels that supply the brain. Representative examples include cerebrovascular ischemia, cerebral embolism, and cerebral infarction.",,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000080,mountain range,,A range of mounts which is dominated by mountains.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Mountain_range|TGN:21432|TGN:21431|SWEETRealm:MountainRange|Geonames:MTS|FTT:997|FTT:995|FTT:548|EcoLexicon:mountain_range,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00000080,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,envoPolar,,,,,,,,mountain range,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A range of mounts which is dominated by mountains.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_51737,"alpha,beta-unsaturated carboxylic ester",,"A carboxylic ester of general formula R<small><sup>1</small></sup>R<small><sup>2</small></sup>C=CR<small><sup>3</small></sup>‒C(=O)OR<small><sup>4</small></sup> (R<small><sup>4</small></sup> ≠ H) or R<small><sup>1</small></sup>C≡C‒C(=O)OR<small><sup>2</small></sup> (R<small><sup>2</small></sup> ≠ H) in which the ester C=O function is conjugated to an unsaturated C-C bond at the α,β position.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:51737,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,"alpha,beta-unsaturated carboxylic ester",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A carboxylic ester of general formula R<small><sup>1</small></sup>R<small><sup>2</small></sup>C=CR<small><sup>3</small></sup>‒C(=O)OR<small><sup>4</small></sup> (R<small><sup>4</small></sup> ≠ H) or R<small><sup>1</small></sup>C≡C‒C(=O)OR<small><sup>2</small></sup> (R<small><sup>2</small></sup> ≠ H) in which the ester C=O function is conjugated to an unsaturated C-C bond at the α,β position.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_1426,ureteral disease,,A urinary system disease that is located_in the ureter.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:1426,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,ureteral disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A urinary system disease that is located_in the ureter.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0001880,organization of specimen provider principal investigator,,An organization that is the affiliation of the principal investigator providing the specimens for the investigation,FALSE,,,,,,,,,,,,,,,,,,,,,NIAID GSCID-BRC metadata working group,,,,,organization of specimen provider principal investigator,,,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0001880,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,organization of specimen provider principal investigator,,,,,,,Sample Provider PI's Institution,,,,,,,,,,,,,,,,,,,,,"PERSON: Chris Stoeckert, Jie Zheng",,,,An organization that is the affiliation of the principal investigator providing the specimens for the investigation,,,,specimen provider PI organization,,,,
http://purl.obolibrary.org/obo/FOODON_03510193,low alcohol claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0193,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510193,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,low alcohol claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100949,moore swab,,"A composite sampler which consists of an absorbent material, suspended in flowing water or wastewater, in order to capture microorganisms or particulates over time.",FALSE,,,,,,,,,,,,,,,,,,,,,https://journals.asm.org/doi/10.1128/aem.00060-20,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100949,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-11-20T16:24:25Z,,,,,,,,,,,,,,,,,,,moore swab,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A composite sampler which consists of an absorbent material, suspended in flowing water or wastewater, in order to capture microorganisms or particulates over time.",,,,,,,,
http://purl.obolibrary.org/obo/SYMP_0000462,symptom,,"A symptom is a perceived change in function, sensation, loss, disturbance or appearance reported by a patient indicative of a disease.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SYMP:0000462,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/symp.owl,,,,,,,,,symptom,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A symptom is a perceived change in function, sensation, loss, disturbance or appearance reported by a patient indicative of a disease.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102283,GeneMind sequencing instrument model,,A sequencing instrument manufactured by GeneMind Biosciences Company that performs high-throughput sequencing using sequencing-by-synthesis chemistry and fluorescence-based detection.,FALSE,,,,,,,sequencing instrument model,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102283,,,,,,,,,,,,,https://orcid.org/0000-0002-7654-6902|https://orcid.org/0000-0001-8008-8249,2026-03-30T14:26:04.627Z,,,,,,,,,,,,,,,,,,,GeneMind sequencing instrument model,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A sequencing instrument manufactured by GeneMind Biosciences Company that performs high-throughput sequencing using sequencing-by-synthesis chemistry and fluorescence-based detection.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000084,read adapter trimming,,The removal of adapter sequences from demultiplexed data reads,FALSE,,,,,,,,,,,,,,,,,,,,,GROUP: IRIDA Ontology (Emma),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000084,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,,,,,,,read adapter trimming,,,,,Sequencing,,,,,,,,,,,,,,,,,,,,,,Adapter Trimming,,,Derived from Illumina Sample Sheet,,The removal of adapter sequences from demultiplexed data reads,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0050026,human monocytic ehrlichiosis,,"An ehrlichiosis that results in infection located in monocyte or located in macrophage, has_material_basis_in Ehrlichia chaffeensis, which is transmitted by black-legged tick (Ixodes scapularis), transmitted by western black-legged tick (Ixodes pacificus) or transmitted by castor bean tick (Ixodes ricinus). The infection has symptom headache, has symptom muscle aches, has symptom fatigue, has symptom fever and has symptom rash.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0050026,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,human monocytic ehrlichiosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An ehrlichiosis that results in infection located in monocyte or located in macrophage, has_material_basis_in Ehrlichia chaffeensis, which is transmitted by black-legged tick (Ixodes scapularis), transmitted by western black-legged tick (Ixodes pacificus) or transmitted by castor bean tick (Ixodes ricinus). The infection has symptom headache, has symptom muscle aches, has symptom fatigue, has symptom fever and has symptom rash.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_0050025,human granulocytic anaplasmosis,,"An ehrlichiosis that results in infection located in granular leukocyte, has_material_basis_in Anaplasma phagocytophilum, which is transmitted by lone star tick (Amblyomma americanum). The infection has symptom headache, has symptom muscle aches, has symptom fatigue, has symptom fever and has symptom rash.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0050025,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,human granulocytic anaplasmosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An ehrlichiosis that results in infection located in granular leukocyte, has_material_basis_in Anaplasma phagocytophilum, which is transmitted by lone star tick (Amblyomma americanum). The infection has symptom headache, has symptom muscle aches, has symptom fatigue, has symptom fever and has symptom rash.",,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_149539,Salmonella enterica subsp. enterica serovar Enteritidis,,,FALSE,,,,,,,Salmonella enterica serovar Enteritidis,,,,,,,,,,,,,,,,,,,Salmonella enterica subsp. enterica serovar Enteritidis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:149539,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Salmonella enterica subsp. enterica serovar Enteritidis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C130200,Solid Organ Transplant Recipient,Solid Organ Transplantation Recipient|Solid Organ Transplant Recipient,An individual who is receiving a transplant of a solid organ.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Solid Organ Transplantation Recipient|Solid Organ Transplant Recipient,,,,NCIT:C130200,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Solid Organ Transplant Recipient,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An individual who is receiving a transplant of a solid organ.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000399,elk eye of round roast,,A cut of meat that is found between the top and bottom round roast located on both hindquarters of the elk.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000399,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,elk eye of round roast,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A cut of meat that is found between the top and bottom round roast located on both hindquarters of the elk.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00005223,"populated place, Nigeria",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00005223,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Nigeria",http://purl.obolibrary.org/obo/GAZ_00000912,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00005221,"populated place, Nicaragua",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00005221,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Nicaragua",http://purl.obolibrary.org/obo/GAZ_00002978,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C87194,State,Territory|State,A constituent administrative district of a nation.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,Territory|State,,,,NCIT:C87194,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,State,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A constituent administrative district of a nation.,,,lookup:http://purl.obolibrary.org/obo/GAZ_00000448,,,,,
http://purl.obolibrary.org/obo/GAZ_00008835,"populated place, Netherlands Antiles",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00008835,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Netherlands Antiles",http://purl.obolibrary.org/obo/GAZ_00004019,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00002785,State (Australia),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00002785,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,State (Australia),http://purl.obolibrary.org/obo/GAZ_00000463,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00002787,Northern Territory,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00002787,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Northern Territory,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00002788,Australian Capital Territory,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00002788,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Australian Capital Territory,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00002784,Territory (Australia),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00002784,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Territory (Australia),http://purl.obolibrary.org/obo/GAZ_00000463,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001717,viral subtype,,A viral subtype is a classification name for a virus according to some protocol.,FALSE,,,,,,,,,,,,,,,,,,,,,NCBI BioSample,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001717,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,viral subtype,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A viral subtype is a classification name for a virus according to some protocol.,,,help:This is an optional additional subtype classification as per organism convention,,,,,
http://purl.obolibrary.org/obo/NCIT_C16118,Anti-HIV Therapy,"therapy, anti-HIV|therapy, AIDS anti-HIV|Anti-HIV Therapy|AIDS anti-HIV therapy","Treatment of human immunodeficiency virus (HIV) infections with medications that target the virus directly, limiting the ability of infected cells to produce new HIV particles.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"therapy, anti-HIV|therapy, AIDS anti-HIV|Anti-HIV Therapy|AIDS anti-HIV therapy",,,,NCIT:C16118,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Anti-HIV Therapy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Treatment of human immunodeficiency virus (HIV) infections with medications that target the virus directly, limiting the ability of infected cells to produce new HIV particles.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C25577,Most Recent,Most Recent,Nearest to the present.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Most Recent,,,,NCIT:C25577,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Most Recent,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Nearest to the present.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00004242,animal food product,,A food product that is derived from some animal.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00004242,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,animal food product,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A food product that is derived from some animal.,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000367,Maghrebi,,A Semite Northern population with a population size of >72 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000367,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Maghrebi,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Semite Northern population with a population size of >72 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000360,Lybian Berber,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000360,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Lybian Berber,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000362,Shilha,,A Berber Northern population with a population size of Afro-Asiatic|Berber|Northern|Atlas,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000362,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Shilha,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Berber Northern population with a population size of Afro-Asiatic|Berber|Northern|Atlas,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000368,Moor,,"A Semite Northern, Semitic Eastern population with a population size of 2 millions",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000368,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Moor,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A Semite Northern, Semitic Eastern population with a population size of 2 millions",,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000361,Moroccan Berber,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000361,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Moroccan Berber,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000364,Tunisian Berber,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000364,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Tunisian Berber,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000366,Haratin,,A Semite Northern population with a population size of 2 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000366,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Haratin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Semite Northern population with a population size of 2 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000369,Bantu Eastern,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000369,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Bantu Eastern,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000363,Tunisian Andalusian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000363,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Tunisian Andalusian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000365,Egyptian,,A Semite Northern population with a population size of 85 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000365,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Egyptian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Semite Northern population with a population size of 85 millions,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0036243,vaginal fluid,,Fluid that lines the vaginal walls that consists of multiple secretions that collect in the vagina from different glands.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,BTO:0003084,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0036243,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,vaginal fluid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Fluid that lines the vaginal walls that consists of multiple secretions that collect in the vagina from different glands.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0036244,secretion of serous membrane,serous fluid,A transudate found in the serous sac.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:20932,,,,,,,,,,,,,,,,,,,,,,,,serous fluid,serous sac fluid,,,,UBERON:0036244,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,secretion of serous membrane,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A transudate found in the serous sac.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530109,home food preparation process,,The process of preparing food at a human residence.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0109,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530109,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,home food preparation process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The process of preparing food at a human residence.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C49188,Microbiology Test,"Microbiology Test|Laboratory Testing, Microbiology",A laboratory procedure to detect microorganisms in a sample.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Microbiology Test|Laboratory Testing, Microbiology",,,,NCIT:C49188,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Microbiology Test,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A laboratory procedure to detect microorganisms in a sample.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0012830,Position,,The anatomical localization of the specified phenotypic abnormality.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4019252,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0012830,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Position,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The anatomical localization of the specified phenotypic abnormality.,,,,position of phenotype abnormality,,,,
http://purl.obolibrary.org/obo/HP_0025722,Cerebral infarct,,"A necrotic lesion in the cerebrum resulting from a sudden insufficiency of arterial or venous blood supply due to emboli, thrombi or mechanical factors.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0025722,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Cerebral infarct,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A necrotic lesion in the cerebrum resulting from a sudden insufficiency of arterial or venous blood supply due to emboli, thrombi or mechanical factors.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038687,visceral lymph node of abdomen,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:277227,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0038687,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,visceral lymph node of abdomen,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038684,superior left gastric lymph node,superior left gastric node|no. 7 left gastric lymph node|jPS no. 7 node|jPS 7 node,Left gastric lymph node located along the left gastric artery.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:277061,,,,,,,,,,,,,,,,,,,,,,,,,superior left gastric node|no. 7 left gastric lymph node|jPS no. 7 node|jPS 7 node,,,,UBERON:0038684,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,superior left gastric lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Left gastric lymph node located along the left gastric artery.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038685,inferior left gastric lymph node,jPS No. 3 node|jPS 3 node|inferior left gastric node,Left gastric lymph node located along the cardiac half of the lesser curvature of stomach in the lesser omentum.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:277064,,,,,,,,,,,,,,,,,,,,,,,,,jPS No. 3 node|jPS 3 node|inferior left gastric node,,,,UBERON:0038685,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,inferior left gastric lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Left gastric lymph node located along the cardiac half of the lesser curvature of stomach in the lesser omentum.,,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000412,prevalence,,"A proportion in which the numerator represents all events of interest (for example, both new and preexisting cases of a disease) in the population, which is represented by the denominator.",FALSE,,,,,,,,,,,,,,,,,,,,,adapted from: https://www.health.ny.gov/diseases/chronic/basicstat.htm,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000412,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,prevalence,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Philippe Rocca-Serra|Brian S. Alper, Muhammad Afzal, Joanne Dehnbostel, Janice Tufte, Kenneth Wilkins, Harold Lehmann",,,,"A proportion in which the numerator represents all events of interest (for example, both new and preexisting cases of a disease) in the population, which is represented by the denominator.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100743,conductivity measurement characterization tag,conductivity measurement data type,A physical characterization data tag which indicates the presence of data that describes conductivity measurement characterization.,FALSE,,,,,,,conductivity measurement,,,,,,,"Example Guidance: Use this tag to indicate additional data is available that provides physical characterization via measurement of conductivity, including the units of measurement.",,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,conductivity measurement data type,,,,GENEPIO:0100743,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-05-18T19:08:34.869Z,,,,,,,,,,,,,,,,,,,conductivity measurement characterization tag,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A physical characterization data tag which indicates the presence of data that describes conductivity measurement characterization.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530047,"cut of meat, composite",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0047,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530047,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"cut of meat, composite",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001585,environment sample scope,,"An environment sample scope indicates that the species content of the sample is not known. Generally, nucleic acid is directly isolated from an environmental sample for analysis. This is used for metagenome studies.",FALSE,,,,,,,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/books/NBK54364/,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001585,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,environment sample scope,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"An environment sample scope indicates that the species content of the sample is not known. Generally, nucleic acid is directly isolated from an environmental sample for analysis. This is used for metagenome studies.",,,,environment,,,,
http://purl.obolibrary.org/obo/CHEBI_37141,organobromine compound,,A compound containing at least one carbon-bromine bond.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:37141,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,organobromine compound,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A compound containing at least one carbon-bromine bond.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_5195,furazolidone,,"A member of the class of oxazolidines that is 1,3-oxazolidin-2-one in which the hydrogen attached to the nitrogen is replaced by an <em>N</em>-{[(5-nitro-2-furyl)methylene]amino} group. It has antibacterial and antiprotozoal properties, and is used in the treatment of giardiasis and cholera.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:5195,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,furazolidone,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A member of the class of oxazolidines that is 1,3-oxazolidin-2-one in which the hydrogen attached to the nitrogen is replaced by an <em>N</em>-{[(5-nitro-2-furyl)methylene]amino} group. It has antibacterial and antiprotozoal properties, and is used in the treatment of giardiasis and cholera.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100450,host ecotype,sample_storage_medium|sample storage medium,A host field which describes the biotype resulting from selection in a particular habitat.,FALSE,,,,,,,PCDS:host_ecotype,,,,,,,PCDS: Provide the name of the ecotype of the host organism.,,,,,,,,,,,,,,PCDS: Sea ecotype,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,sample_storage_medium|sample storage medium,sample storage medium slot,,,,GENEPIO:0100450,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,host ecotype,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A host field which describes the biotype resulting from selection in a particular habitat.,,PCDS: The biotype resulting from selection in a particular habitat.,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530253,organic plant cultivation,,"Plant cultivation according to organic food production methods including the use of fertilizers of organic origin such as compost manure, green manure, and bone meal and places emphasis on techniques such as crop rotation and companion planting, biological pest control and the fostering of insect predators.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0253,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530253,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,organic plant cultivation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Plant cultivation according to organic food production methods including the use of fertilizers of organic origin such as compost manure, green manure, and bone meal and places emphasis on techniques such as crop rotation and companion planting, biological pest control and the fostering of insect predators.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100039,virus passage,,The process of growing a virus in serial iterations.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100039,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,virus passage,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The process of growing a virus in serial iterations.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C189008,COVID-19 Complication,COVID-19 Complications|COVID-19 Complication,"A disease or disorder that occurs during the course of, or because of COVID-19 infection or treatment.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,COVID-19 Complications|COVID-19 Complication,,,,NCIT:C189008,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,COVID-19 Complication,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A disease or disorder that occurs during the course of, or because of COVID-19 infection or treatment.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510273,Northern Plains food claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0273,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510273,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,Northern Plains food claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001392,host age,host age,A host data field which describes the age of the host at the time of sampling.,FALSE,,,,,,,PCDS:host_age,,,,,,,"PCDS: If known, provide age. Age-binning is also acceptable.",,,,,,,,,,,,,,PCDS: 79,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,host age,host age slot,,,,GENEPIO:0001392,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,host age,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A host data field which describes the age of the host at the time of sampling.,,PCDS: Age of host at the time of sampling.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001236,specimen record,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001236,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,specimen record,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03450028,stir-frying,,"Cooked by frying foods quickly over high heat, stirring constantly. Only enough cooking oil is used to coat the bottom of the pan.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=G0028,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03450028,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,stir-frying,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Cooked by frying foods quickly over high heat, stirring constantly. Only enough cooking oil is used to coat the bottom of the pan.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0006925,digestive system gland,,Any gland that is part of the digestive system.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,BTO:0000345|AAO:0000130,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0006925,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,digestive system gland,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any gland that is part of the digestive system.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00005406,pork loin center roast,,A roast derived from the Loin Center Cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00005406,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pork loin center roast,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A roast derived from the Loin Center Cut.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_11394,adult respiratory distress syndrome,,"A respiratory failure that results from diffuse injury to the endothelium of the lung (as in sepsis, chest trauma, massive blood transfusion, aspiration of the gastric contents, or pneumonia) and is characterized by pulmonary edema with an abnormally high amount of protein in the edematous fluid and by difficult rapid breathing and hypoxemia.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:11394,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,adult respiratory distress syndrome,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A respiratory failure that results from diffuse injury to the endothelium of the lung (as in sepsis, chest trauma, massive blood transfusion, aspiration of the gastric contents, or pneumonia) and is characterized by pulmonary edema with an abnormally high amount of protein in the edematous fluid and by difficult rapid breathing and hypoxemia.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00005405,lamb hind shank,,Meat lower shank from the hind leg with no hock bone.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00005405,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lamb hind shank,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Meat lower shank from the hind leg with no hock bone.,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0002657,breast disorder,disorder of breast|disease or disorder of breast|disease of breast|breast disorder|breast diseases|breast disease or disorder|breast disease,A disease involving the breast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0006145|SCTID:79604008|NCIT:C26709|MESH:D001941|MEDGEN:652|ICD9:611.9|ICD9:611.8|ICD9:610-612|ICD10CM:N60-N65|EFO:0009483|DOID:3463,,,,,,,,,,,,,,,,,,,,,,,,,disorder of breast|disease or disorder of breast|disease of breast|breast disorder|breast diseases|breast disease or disorder|breast disease,,,,MONDO:0002657,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar|http://purl.oboInOwllibrary.org/oboInOwl/mondo#harrisons_view,,,,,,,,breast disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A disease involving the breast.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0001513,Obesity,Obesity|Having too much body fat,Accumulation of substantial excess body fat.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0028754|SNOMEDCT_US:414916001|SNOMEDCT_US:414915002,,,,,,,,,,,,,,,,,,,,,,,,,Obesity|Having too much body fat,,,,HP:0001513,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Obesity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Accumulation of substantial excess body fat.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0080176,meningococcal meningitis,,A bacterial meningitis that has_material_basis_in Neisseria meningitidis infection.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0080176,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,meningococcal meningitis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A bacterial meningitis that has_material_basis_in Neisseria meningitidis infection.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0080179,haemophilus meningitis,,A bacterial meningitis that has_material_basis_in Haemophilus influenzae infection.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0080179,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,haemophilus meningitis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A bacterial meningitis that has_material_basis_in Haemophilus influenzae infection.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03311653,turkey breast (roasted),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://bioregistry.io/reference/siren:F11653,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03311653,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,turkey breast (roasted),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C14419,Organism Strain,strain|Strain Number|Strain|STRAIN|Organism Strain,A population or type of organisms that is genetically different from others of the same species and possessing a set of defined characteristics.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,strain|Strain Number|Strain|STRAIN|Organism Strain,,,,NCIT:C14419,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Organism Strain,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population or type of organisms that is genetically different from others of the same species and possessing a set of defined characteristics.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01001477,liquid astronomical body part,,A part of an astronomical body which is primarily composed of liquid material.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01001477,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,liquid astronomical body part,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A part of an astronomical body which is primarily composed of liquid material.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100533,prior mpox infection date,prior Monkeypox infection date,A prior infection data field which describes the date of diagnosis of the prior Monkeypox infection.,FALSE,,,,,,,PCDS:prior_mpox_infection_date,,,,,,,PCDS: Provide the date that the most recent prior infection was diagnosed. Provide the prior Mpox infection date in ISO 8601 standard format 'YYYY-MM-DD'.,,,,,,,,,,,,,,PCDS: 2021-01-23,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,prior Monkeypox infection date,prior Monkeypox infection date slot,,,,GENEPIO:0100533,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,prior mpox infection date,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A prior infection data field which describes the date of diagnosis of the prior Monkeypox infection.,,PCDS: The date of diagnosis of the prior Mpox infection.,,,,,,
http://purl.obolibrary.org/obo/FOODON_00005379,beef oyster blade (raw),,A raw beef oyster blade cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00005379,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef oyster blade (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef oyster blade cut.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02021424,piece of elk (raw),,A raw piece of elk.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02021424,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of elk (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw piece of elk.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000093,beef square cut chuck,,"A beef cut that is the portion of the forequarter after removal of the rib, shortplate, foreshank and brisket.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000093,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef square cut chuck,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A beef cut that is the portion of the forequarter after removal of the rib, shortplate, foreshank and brisket.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_33304,chalcogen molecular entity,,Any p-block molecular entity containing a chalcogen.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:33304,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,chalcogen molecular entity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any p-block molecular entity containing a chalcogen.,,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000266,Bayes factor,,"Bayes factor is a ratio between 2 probabilities of observing data according 2 distinct models. It is used in Bayes model selection to evaluate which model best explains the data. if K<0, the model used in the denominator term is supported, if K>1, the model used in the numerator term is supported.
The Bayes factor is about the plausibility of 2 different models",FALSE,,,,,,,,,,,,,,,,,,,,,"adapted from Wikipedia
last accessed 2013-11-13",,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000266,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,Bayes factor,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra|Alejandra Gonzalez-Beltran|Orlaith Burke,,,,"Bayes factor is a ratio between 2 probabilities of observing data according 2 distinct models. It is used in Bayes model selection to evaluate which model best explains the data. if K<0, the model used in the denominator term is supported, if K>1, the model used in the numerator term is supported.
The Bayes factor is about the plausibility of 2 different models",,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000105,log signal intensity ratio,,"log signal intensity ratio is a data item which corresponding the logarithmitic base 2 of the ratio between 2 signal intensity, each corresponding to a condition.",FALSE,,,,,,,,,,,,,,,,,,,,,"adapted from wikipedia:
http://en.wikipedia.org/wiki/MA_plot
last accessed: 2014-03-13",,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000105,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,log signal intensity ratio,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra|Orlaith Burke|Alejandra Gonzalez-Beltran,,,,"log signal intensity ratio is a data item which corresponding the logarithmitic base 2 of the ratio between 2 signal intensity, each corresponding to a condition.",,,,,,,,
http://purl.obolibrary.org/obo/OBI_0001619,specimen collection time measurement datum,,A time measurement datum that is the measure of the time when the specimens are collected.,FALSE,,,,,,,collection date,,,,,,,,,,,,,,NIAID GSCID-BRC metadata working group,,,,,specimen collection time measurement datum,,,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0001619,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,specimen collection time measurement datum,,,,,,,Specimen Collection Date,,,,,,,,,,,,,,,,,,,,,"Person: Chris Stoeckert, Jie Zheng",,,,A time measurement datum that is the measure of the time when the specimens are collected.,,,,specimen collection date,,,,
http://purl.obolibrary.org/obo/CHEBI_23239,chromopeptide,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:23239,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,chromopeptide,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0000659,specimen collection process,,A planned process with the objective to obtain a material entity for potential use as an input upon which measurements or observations are performed.,FALSE,,,,,,,specimen collection,,,,,,,,,,,,,"6/9/09: used at workshop|5/31/2012: This process is not necessarily an acquisition, as specimens may be collected from materials already in posession",,,,,"label  changed to 'specimen collection process' on 10/27/2014, details see tracker:
http://sourceforge.net/p/obi/obi-terms/716/|Philly2013: The specimen_role for the specimen is created during the specimen collection process.|Philly2013: A specimen collection can have as part a material entity acquisition, such as ordering from a bank. The distinction is that specimen collection necessarily involves the creation of a specimen role. However ordering cell lines cells from ATCC for use in an investigation is NOT a specimen collection, because the cell lines already have a specimen role.|Note: definition is in specimen creation objective which is defined as an objective to obtain and store a material entity for potential use as an input during an investigation.|Definition updated following discussion on 2024-10-07 OBI dev call.",specimen collection process,,"drawing blood from a patient for analysis, collecting a piece of a plant for depositing in a herbarium, buying meat from a butcher in order to measure its protein content in an investigation, collecting a stone from a site",,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/BFO_0000040,http://purl.obolibrary.org/obo/OBI_0100051,,,,,,,,,,OBI:0000659,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,specimen collection process,,,,,,,,,,,,,,,,,,,,,,,,,,,,Bjoern Peters,,,,A planned process with the objective to obtain a material entity for potential use as an input upon which measurements or observations are performed.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000060,AccuProbe culture identification assay,,An AccuProbe assay that uses a luminometer and DNA probe designed to identify a specific bacteria or fungus species within a culture.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0000062,,,,,,,,,,,,,,,,,,GENEPIO:0000060,,,,"Nucleic acid hybridization tests are based on the ability of complementary nucleic acid strands to specifically align and associate to form stable double-stranded complexes (6). The ACCUPROBE method uses a single-stranded DNA probe with a chemiluminescent label that is complementary to the ribosomal RNA of the target organism. After the ribosomal RNA is released from the target organism, the labeled DNA probe combines with the target organism’s ribosomal RNA to form a stable DNA:RNA hybrid. The Selection Reagent allows for the differentiation of non-hybridized and hybridized probes.The light signal emitted by the DNA:RNA hybrids is measured by a GEN-PROBE luminometer. A positive result is a luminometer reading equal to or greater than the cut-off. A value below this cut-off is the negative result.",,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,,,,,,,AccuProbe culture identification assay,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,An AccuProbe assay that uses a luminometer and DNA probe designed to identify a specific bacteria or fungus species within a culture.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_403,mouth disease,,A gastrointestinal system disease that is located_in the mouth.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:403,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,mouth disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A gastrointestinal system disease that is located_in the mouth.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_401,multidrug-resistant tuberculosis,,"A tuberculosis that is resistant to isoniazid and rifampicin, the two most powerful first-line anti-TB drugs.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:401,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,multidrug-resistant tuberculosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A tuberculosis that is resistant to isoniazid and rifampicin, the two most powerful first-line anti-TB drugs.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_409,liver disease,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:409,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,liver disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_402,oral tuberculosis,,"A gastrointestinal tuberculosis that involves formation of painful ulcerative mucosal lesions located in tongue, located in palate, located in maxilla or located in mandible.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:402,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,oral tuberculosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A gastrointestinal tuberculosis that involves formation of painful ulcerative mucosal lesions located in tongue, located in palate, located in maxilla or located in mandible.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_407,hepatic tuberculosis,,"A gastrointestinal tuberculosis that involves infection located_in liver, which results in the formation of tuberculous granulomas. The infection has_symptom fever, has_symptom anorexia, has_symptom weight loss, has_symptom abdominal pain and has_symptom jaundice.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:407,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,hepatic tuberculosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A gastrointestinal tuberculosis that involves infection located_in liver, which results in the formation of tuberculous granulomas. The infection has_symptom fever, has_symptom anorexia, has_symptom weight loss, has_symptom abdominal pain and has_symptom jaundice.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_404,gastrointestinal tuberculosis,,"An abdominal tuberculosis that results_in infection located_in gastrointestinal tract. The infection has_symptom abdominal pain, has_symptom weight loss, has_symptom fever, has_symptom anorexia, has_symptom constipation, has_symptom nausea, and has_symptom vomiting.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:404,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,gastrointestinal tuberculosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An abdominal tuberculosis that results_in infection located_in gastrointestinal tract. The infection has_symptom abdominal pain, has_symptom weight loss, has_symptom fever, has_symptom anorexia, has_symptom constipation, has_symptom nausea, and has_symptom vomiting.",,,,,,,,
http://purl.obolibrary.org/obo/HP_0025406,Asthenia,Weakness|Lack of energy and strength,A state characterized by a feeling of weakness and loss of strength leading to a generalized weakness of the body.,FALSE,,,,,,,,,,,,,,"Asthenia is to be distinguished from fatigue, because asthenia refers to a sensation of exhaustion which occurs before any effort. Asthenia is to be distinguished from myasthenia, which means a specific weakness of one or more muscles. Asthenia and fatigue can coexist.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Weakness|Lack of energy and strength,,,,HP:0025406,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Asthenia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A state characterized by a feeling of weakness and loss of strength leading to a generalized weakness of the body.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002055,obsolete: manual - noncommercial,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002055,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: manual - noncommercial,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ARO_3004399,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0483,Ni-Vanuato,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0483,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Ni-Vanuato,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0487,Indian,Indian Asian|Asian Indian,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Indian Asian|Asian Indian,,,,HANCESTRO:0487,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Indian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0485,Bangladeshi,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0485,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Bangladeshi,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0481,Tongan,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0481,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Tongan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0488,Maldivian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0488,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Maldivian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0489,Nepalese,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0489,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Nepalese,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0486,Bhutanese,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0486,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Bhutanese,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0484,Wallis and Futuna Islander,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0484,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Wallis and Futuna Islander,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0482,Tuvaluan,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0482,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Tuvaluan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0480,Tokelauan,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0480,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Tokelauan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0007644,thoracic lymph node,lymph node of thorax,A lymph node that is part of a thorax. Includes lymph nodes of the lungs and mediastinal lymph nodes.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Lymph_node#Lymph_nodes_of_the_thorax|UMLS:C0229745|SCTID:196374005|NCIT:C33769|FMA:12772,,,,,,,,,,,,,,,,,,,,,,,,,lymph node of thorax,,,,UBERON:0007644,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,thoracic lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A lymph node that is part of a thorax. Includes lymph nodes of the lungs and mediastinal lymph nodes.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0007643,node of ligamentum arteriosum,nodus ligamenti arteriosi|lymph node of ligamentum arteriosum|ligamentum arteriosum node|Botallo's node,An inconstant lymph node of the anterior mediastinal group located adjacent to the ligamentum arteriosum.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:74033,,,,,,,,,,,,,,,,,,,,,,,,,nodus ligamenti arteriosi|lymph node of ligamentum arteriosum|ligamentum arteriosum node|Botallo's node,,,,UBERON:0007643,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,node of ligamentum arteriosum,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An inconstant lymph node of the anterior mediastinal group located adjacent to the ligamentum arteriosum.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001922,circle,,"A circle is a simple closed shape in Euclidean geometry. It is the set of all points in a plane that are at a given distance from a given point, the centre; equivalently it is the curve traced out by a point that moves so that its distance from a given point is constant.",FALSE,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Circle,,,,,,,,,http://purl.obolibrary.org/obo/PATO_0002390|http://purl.obolibrary.org/obo/GENEPIO_0002035,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001922,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,circle,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"A circle is a simple closed shape in Euclidean geometry. It is the set of all points in a plane that are at a given distance from a given point, the centre; equivalently it is the curve traced out by a point that moves so that its distance from a given point is constant.",,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0005046,immune system disorder,immune system disorder|immune system disease or disorder|immune dysfunction|immune disorder|immune disease|disorder of immune system|disease or disorder of immune system|disease of immune system,A disorder resulting from an abnormality in the immune system.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0021053|SCTID:414029004|NCIT:C3507|NANDO:2100202|NANDO:1100004|MESH:D007154|MEDGEN:5759|ICD9:279.9|ICD9:279.8|ICD9:279.49|ICD9:279.4|ICD9:279.19|ICD9:279.10|ICD9:279.1|ICD9:279|EFO:0000540|DOID:2914,,,,,,,,,,,,,,,,,,,,,,,,,immune system disorder|immune system disease or disorder|immune dysfunction|immune disorder|immune disease|disorder of immune system|disease or disorder of immune system|disease of immune system,,,,MONDO:0005046,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#rare_grouping|http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar|http://purl.oboInOwllibrary.org/oboInOwl/mondo#harrisons_view,,,,,,,,immune system disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A disorder resulting from an abnormality in the immune system.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510038,low salt or sodium claim,,"A claim that a food is low in sodium/salt, and any claim likely to have the same meaning for the consumer, may only be made where the product contains no more than 0,12 g of sodium, or the equivalent value for salt, per 100 g or per 100 ml. For waters, other than natural mineral waters falling within the scope of Directive 80/777/EEC, this value should not exceed 2 mg of sodium per 100 ml [REGULATION (EC) No 1924/2006 Corrigendum 2007-01-18].

Food having 140 milligrams or less salt or sodium per amount customarily consumed. Meals and main dishes have 140 milligrams or less salt or sodium per 100 grams food [US FDA]",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0038,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510038,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,low salt or sodium claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A claim that a food is low in sodium/salt, and any claim likely to have the same meaning for the consumer, may only be made where the product contains no more than 0,12 g of sodium, or the equivalent value for salt, per 100 g or per 100 ml. For waters, other than natural mineral waters falling within the scope of Directive 80/777/EEC, this value should not exceed 2 mg of sodium per 100 ml [REGULATION (EC) No 1924/2006 Corrigendum 2007-01-18].

Food having 140 milligrams or less salt or sodium per amount customarily consumed. Meals and main dishes have 140 milligrams or less salt or sodium per 100 grams food [US FDA]",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001573,agricultural project relevance,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001573,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,agricultural project relevance,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_611,Salmonella enterica subsp. enterica serovar Heidelberg,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,Salmonella enterica subsp. enterica serovar Heidelberg,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:611,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Salmonella enterica subsp. enterica serovar Heidelberg,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/OBIB_0000001,sample collection identifier,,A proper name that refers to a sample collection.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBIB:0000001,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/obib.owl,,,,,,,,,sample collection identifier,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A proper name that refers to a sample collection.,,,,,,,,
http://purl.obolibrary.org/obo/OBIB_0000689,storage temperature setting,,A setting datum that specifies the temperature inside a container participating in a storage process.,FALSE,,,,,,,,,,,,,,"Examples:  -18 °C to -35 °C, -60 °C to -85 °C, Liquid nitrogen, Room temperature etc",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBIB:0000689,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/obib.owl,,,,,,,,,storage temperature setting,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A setting datum that specifies the temperature inside a container participating in a storage process.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000042,stream order categorical measurement datum,,"Stream order is a measure of the relative size of streams (The smallest tributaries are referred to as first-order streams, while the largest river in the world, the Amazon, is a twelfth-order waterway).",FALSE,,,,,,,,,,,,,,,,,,,,,GROUP: Environment Canada Metadata,,,,,,,"value, 1-12",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000042,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,,,,,,,stream order categorical measurement datum,,,,,Environmental Isolate,,,,,,,,,,,,,,,,,,,,,,Stream order,,,Environment Canada Metadata,,"Stream order is a measure of the relative size of streams (The smallest tributaries are referred to as first-order streams, while the largest river in the world, the Amazon, is a twelfth-order waterway).",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510096,color-related claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0096,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510096,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,color-related claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102291,Ultima UG100,,"A DNA sequencer manufactured by Ultima which applies semiconductor sequencing technology for rapid and cost-effective targeted sequencing of human and viral DNA, optimized for clinical laboratory settings.",FALSE,,,,,,,UG100,,,,,,,,,,,,,,https://www.ultimagenomics.com/products/ug-100-sequencing-platform,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102291,,,,,,,,,,,,,https://orcid.org/0000-0002-7654-6902|https://orcid.org/0000-0001-8008-8249,2026-03-30T14:26:04.627Z,,,,,,,,,,,,,,,,,,,Ultima UG100,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A DNA sequencer manufactured by Ultima which applies semiconductor sequencing technology for rapid and cost-effective targeted sequencing of human and viral DNA, optimized for clinical laboratory settings.",,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01001787,aquatic ecosystem,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01001787,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,aquatic ecosystem,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00051073,Pacific Ocean region,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00051073,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Pacific Ocean region,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00051071,Atlantic Ocean region,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00051071,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Atlantic Ocean region,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00051074,European Seas,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00051074,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,European Seas,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00005377,beef bolar blade (raw),,A raw beef bolar blade cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00005377,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef bolar blade (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef bolar blade cut.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100956,automatic composite sampling,,"A method of composite sampling which utilizes an automated system to collect multiple samples, continuously or at discrete timepoints.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100956,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-11-20T16:24:25Z,,,,,,,,,,,,,,,,,,,automatic composite sampling,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A method of composite sampling which utilizes an automated system to collect multiple samples, continuously or at discrete timepoints.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03480014,packed in gas other than air,,"Packed in a modified atmosphere that contributes to preservation (e.g., applesauce packed with nitrogen in the head space or tuna salad sandwich packed in nitrogen-containing polyethylene wrapper). Also applicable to large-scale applications in shipping or storage (e.g., meat under carbon dioxide in a rail car).",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=K0014,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03480014,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,packed in gas other than air,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Packed in a modified atmosphere that contributes to preservation (e.g., applesauce packed with nitrogen in the head space or tuna salad sandwich packed in nitrogen-containing polyethylene wrapper). Also applicable to large-scale applications in shipping or storage (e.g., meat under carbon dioxide in a rail car).",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510048,high fiber food,,"A claim that a food is high in fibre, and any claim likely to have the same meaning for the consumer, may only be made where the product contains at least 6 g of fibre per 100 g or at least 3 g of fibre per 100 kcal [REGULATION (EC) No 1924/2006 Corrigendum 2007-01-18].

Food that is promoted as a source of or as high in dietary fiber (often called simply 'fiber').",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0048,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510048,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,high fiber food,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A claim that a food is high in fibre, and any claim likely to have the same meaning for the consumer, may only be made where the product contains at least 6 g of fibre per 100 g or at least 3 g of fibre per 100 kcal [REGULATION (EC) No 1924/2006 Corrigendum 2007-01-18].

Food that is promoted as a source of or as high in dietary fiber (often called simply 'fiber').",,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00002127,stream sediment,,Revise adjacent to. Consider sampled stream sediment. Dry stream sediment.,FALSE,,,,,,,,,,,,,,Revise adjacent to. Consider sampled stream sediment. Dry stream sediment.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00002127,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,stream sediment,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001577,environmental project relevance,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001577,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,environmental project relevance,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490150,paperboard molded pack,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0150,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490150,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,paperboard molded pack,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/IAO_0000007,action specification,,A directive information entity that describes an action the bearer will take.,FALSE,,,,,,,,,,,,,,,,,,,,,OBI Plan and Planned Process branch,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,IAO:0000007,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/iao.owl|http://purl.obolibrary.org/obo/cob.owl,,,,,,,,,action specification,,,,,,,,,,,,,,,,,,,,,,,,,,,,Alan Ruttenberg,,,,A directive information entity that describes an action the bearer will take.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0037764,anterior superior deep cervical lymph node,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:232355,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0037764,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,anterior superior deep cervical lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0037763,lateral superior deep cervical lymph node,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:232351,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0037763,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,lateral superior deep cervical lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0037765,lateral inferior deep cervical lymph node,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:232358,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0037765,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,lateral inferior deep cervical lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0037766,anterior inferior deep cervical lymph node,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:232361,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0037766,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,anterior inferior deep cervical lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001272,exposure by human contact,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001272,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,exposure by human contact,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0000992,ovary,reproductive system of female organism gonada|reproductive system of female organism gonad|ovum-producing ovary|gonada of reproductive system of female organism|gonada of genitalia of female organism|gonada of female reproductive system|gonada of female organism reproductive system|gonada of female organism genitalia|gonad of reproductive system of female organism|gonad of genitalia of female organism|gonad of female reproductive system|gonad of female organism reproductive system|gonad of female organism genitalia|genitalia of female organism gonada|genitalia of female organism gonad|female reproductive system gonada|female reproductive system gonad|female organism reproductive system gonada|female organism reproductive system gonad|female organism genitalia gonada|female organism genitalia gonad|female gonad|animal ovary,The gonad of a female organism which contains germ cells.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ZFA:0000403|XAO:0000258|Wikipedia:Ovary|VHOG:0000251|UMLS:C0029939|TAO:0000403|SCTID:181464007|NCIT:C12404|MIAA:0000125|MESH:D010053|MA:0000384|GAID:367|FMA:7209|FBbt:00004865|EV:0100111|EMAPA:17962|EHDAA:8124|EHDAA2:0001360|EFO:0000973|CALOHA:TS-0730|BTO:0000975|BSA:0000080|BILA:0000125|AAO:0000371,,,,,,,,,,,,,,,,,,,,,,,,,reproductive system of female organism gonada|reproductive system of female organism gonad|ovum-producing ovary|gonada of reproductive system of female organism|gonada of genitalia of female organism|gonada of female reproductive system|gonada of female organism reproductive system|gonada of female organism genitalia|gonad of reproductive system of female organism|gonad of genitalia of female organism|gonad of female reproductive system|gonad of female organism reproductive system|gonad of female organism genitalia|genitalia of female organism gonada|genitalia of female organism gonad|female reproductive system gonada|female reproductive system gonad|female organism reproductive system gonada|female organism reproductive system gonad|female organism genitalia gonada|female organism genitalia gonad|female gonad|animal ovary,,,,UBERON:0000992,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,ovary,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The gonad of a female organism which contains germ cells.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0000991,gonad,gonada,Reproductive organ that produces and releases eggs (ovary) or sperm (testis).,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ZFA:0000413|XAO:0003146|Wikipedia:Gonad|WBbt:0005175|VHOG:0000397|UMLS:C0018067|TAO:0000413|SCTID:304623008|NCIT:C12725|MESH:D006066|MA:0002420|HAO:0000379|GAID:368|FMA:18250|EMAPA:17383|BTO:0000534|BSA:0000079|BILA:0000123|AAO:0000213,,,,,,,,,,,,,,,,,,,,,,,,,gonada,,,,UBERON:0000991,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,gonad,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Reproductive organ that produces and releases eggs (ovary) or sperm (testis).,,,,,,,,
http://purl.obolibrary.org/obo/BFO_0000019,quality,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,BFO:0000019,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/omit.owl,,,,,,,,,quality,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100843,dna fragment length,DNA fragment length,A data field which describes the length of the DNA fragment generated by mechanical shearing or enzymatic digestion for the purposes of library preparation.,FALSE,,,,,,,PCDS:dna_fragment_length,,,,,,,PCDS: Provide the fragment length in base pairs (do not include the units).,,,,,,,,,,,Drafted 2023-07-27,,,PCDS: 400,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,DNA fragment length,DNA fragment length slot,,,,GENEPIO:0100843,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,dna fragment length,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the length of the DNA fragment generated by mechanical shearing or enzymatic digestion for the purposes of library preparation.,,PCDS: The length of the DNA fragment generated by mechanical shearing or enzymatic digestion for the purposes of library preparation.,,,,,,
http://purl.obolibrary.org/obo/CHEBI_87228,sulfonamide antibiotic,,A class of sulfonamides whose members generally have bacteriostatic antibiotic properties.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:87228,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,sulfonamide antibiotic,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A class of sulfonamides whose members generally have bacteriostatic antibiotic properties.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001410,location of exposure geo loc name country,location of exposure geo_loc name (country),A geographical data field which describes the country where the host was likely exposed to the causative agent of the illness.,FALSE,,,,,,,PCDS:location_of_exposure_geo_loc_name_country,,,,,,,PCDS: Select the country name from pick list provided in the template.,,,,,,,,,,,,,,PCDS: Canada,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,location of exposure geo_loc name (country),location of exposure geographical location country name slot|location of exposure geographical location country name field|location of exposure geo_loc name (country) slot,,,,GENEPIO:0001410,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,location of exposure geo loc name country,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A geographical data field which describes the country where the host was likely exposed to the causative agent of the illness.,,PCDS: The country where the host was likely exposed to the causative agent of the illness.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100954,composite sampling,,An environmental material collection process in which mutliple water or soil samples are taken at different time points and combined to produce a composite. Samples can be collected continuously or at discrete time points.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100954,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-11-20T16:24:25Z,,,,,,,,,,,,,,,,,,,composite sampling,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental material collection process in which mutliple water or soil samples are taken at different time points and combined to produce a composite. Samples can be collected continuously or at discrete time points.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02021033,buffalo steak (raw),,A raw buffalo steak.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02021033,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,buffalo steak (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw buffalo steak.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102268,third party role,third-party role,"A role that inheres in a subject and is realized in processes in which the subject stands in relation to two or more principal parties without being one of those principals, thereby functioning as a third party within that context.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,pending final vetting,,,,,,,,,,,,,,,,,,,,,,,,,,third-party role,,,,GENEPIO:0102268,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788,2026-01-28T19:04:12.572Z,,,,,,,,,,,,,,,,,,,third party role,,,,,,,,,,,,,,,,,,,,,,https://www.merriam-webster.com/dictionary/third%20party,,,,,,,,,,"A role that inheres in a subject and is realized in processes in which the subject stands in relation to two or more principal parties without being one of those principals, thereby functioning as a third party within that context.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510113,no artificial preservatives claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0113,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510113,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,no artificial preservatives claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_17076,streptomycin,,A amino cyclitol glycoside that consists of streptidine having a disaccharyl moiety attached at the 4-position. The parent of the streptomycin class,FALSE,,,,,,,Stm|Sm|STR,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:9284|CHEBI:45745|CHEBI:26784|CHEBI:15119,,,,,,CHEBI:17076,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,streptomycin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A amino cyclitol glycoside that consists of streptidine having a disaccharyl moiety attached at the 4-position. The parent of the streptomycin class,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_24278,glucoside,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:24278,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,glucoside,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_10073,syphilitic meningitis,,A bacterial meningitis that is characterized by inflammation of the tissues covering the brain and spinal cord.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:10073,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,syphilitic meningitis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A bacterial meningitis that is characterized by inflammation of the tissues covering the brain and spinal cord.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03500049,husk food contact surface,,A plant husk used as a food contact surface.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=N0049,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03500049,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,husk food contact surface,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A plant husk used as a food contact surface.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510265,structure/function claim,,"Structure/function claims describe the role of a nutrient or dietary ingredient intended to affect normal structure or function in humans, for example, ""calcium builds strong bones"". In addition, they may characterize the means by which a nutrient or dietary ingredient acts to maintain such structure or function, for example, ""fiber maintains bowel regularity,"" or ""antioxidants maintain cell integrity,""or they may describe general well-being from consumption of a nutrient or dietary ingredient. [http://www.fda.gov/Food/LabelingNutrition/LabelClaims/StructureFunctionClaims/default.htm]",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0265,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510265,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,structure/function claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Structure/function claims describe the role of a nutrient or dietary ingredient intended to affect normal structure or function in humans, for example, ""calcium builds strong bones"". In addition, they may characterize the means by which a nutrient or dietary ingredient acts to maintain such structure or function, for example, ""fiber maintains bowel regularity,"" or ""antioxidants maintain cell integrity,""or they may describe general well-being from consumption of a nutrient or dietary ingredient. [http://www.fda.gov/Food/LabelingNutrition/LabelClaims/StructureFunctionClaims/default.htm]",,,,,,,,
http://purl.obolibrary.org/obo/DOID_162,cancer,,"A disease of cellular proliferation that is malignant and primary, characterized by uncontrolled cellular proliferation, local cell invasion and metastasis.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:162,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,cancer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A disease of cellular proliferation that is malignant and primary, characterized by uncontrolled cellular proliferation, local cell invasion and metastasis.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_16,integumentary system disease,,A disease of anatomical entity that is located_in the integumentary system comprising the skin and its appendages.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:16,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,integumentary system disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A disease of anatomical entity that is located_in the integumentary system comprising the skin and its appendages.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100624,sequence identity variance ratio,,"PCDS: Enter the number of different positions in the target sequence compared to the reference sequence length, expressed as a ratio.",FALSE,,,,,,,PCDS:sequence_identity_variance_ratio,,,,,,,"PCDS: Enter the number of different positions in the target sequence compared to the reference sequence length, expressed as a ratio.",,,,,,,,,,,,,,PCDS: 1/420,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100624,,,,,,,,,,,,,,2026-04-13T17:18:02.461Z,,,,,,,,,,,,,,,,,,,sequence identity variance ratio,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PCDS: The ratio of the reference sequence not covered by the sequence of interest.,,,,,,
http://purl.obolibrary.org/obo/MONDO_0000314,primary bacterial infectious disease,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0050338,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MONDO:0000314,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,,,,,,,,,primary bacterial infectious disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/PATO_0001595,depth,,A 1-D extent quality inhering in a bearer by virtue of the bearer's downward or backward or inward dimension.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PATO:0001595,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/pato.owl,http://purl.oboInOwllibrary.org/oboInOwl/pato#scalar_slim|http://purl.oboInOwllibrary.org/oboInOwl/pato#attribute_slim,,,,,,,,depth,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A 1-D extent quality inhering in a bearer by virtue of the bearer's downward or backward or inward dimension.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0001884,specimen-based scope of investigation specification,,A plan specification which specifies the scope of an investigation based on the heterogeneity of organisms or type of material that are the specified input of specimen collection.,FALSE,,,,,,,,,,,,,,,,,,,,,NIAID GSCID-BRC metadata working group,,,,,specimen-based scope of investigation specification,,"Some examples of specimen scope are Monoisolate, Multiisolate, Multi-species, Environment, or Synthetic.",,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0001884,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,specimen-based scope of investigation specification,,,,,,,Sample Scope,,,,,,,,,,,,,,,,,,,,,"PERSON: Chris Stoeckert, Jie Zheng",,,,A plan specification which specifies the scope of an investigation based on the heterogeneity of organisms or type of material that are the specified input of specimen collection.,,,,specimen sample scope,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100200,group home exposure process,,A process occuring within or in the vicinity of a group home that exposes the recipient organism to a material entity.,FALSE,,,,,,,Group Home,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100200,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,group home exposure process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A process occuring within or in the vicinity of a group home that exposes the recipient organism to a material entity.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001618,missing,,A categorical choice recorded when a measurement value was known to be recorded in the past but the observed value cannot be located or retrieved for some reason.,FALSE,,,,,,,,,,,,,,,,,,,,,https://ena-docs.readthedocs.io/en/latest/submit/samples/missing-values.html,,,,,,,,,,,NCBI Biosample: missing|http://purl.obolibrary.org/obo/GENEPIO_0001666,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001618,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,missing,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,INSDC term (top level),,A categorical choice recorded when a measurement value was known to be recorded in the past but the observed value cannot be located or retrieved for some reason.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510085,very low salt claim,,Food having less than 35 milligrams of salt per serving and per 100 grams of food. (U.S. proposed),FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0085,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510085,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,very low salt claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Food having less than 35 milligrams of salt per serving and per 100 grams of food. (U.S. proposed),,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000237,beef rib finger,,A thin strip of beef cut from between individual ribs in the rib primal.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000237,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef rib finger,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A thin strip of beef cut from between individual ribs in the rib primal.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510173,no vitamin or mineral added claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0173,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510173,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,no vitamin or mineral added claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100114,obsolete: Illumina HiSeq 1000,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,Rehomed in OBI,,,,,,,,,,,,,,,,,,,GENEPIO:0100114,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: Illumina HiSeq 1000,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/OBI_0002022,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100194,nursery exposure process,,A process occuring within or in the vicinity of a human nursery that exposes the recipient organism to a material entity.,FALSE,,,,,,,Nursery,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100194,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,nursery exposure process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A process occuring within or in the vicinity of a human nursery that exposes the recipient organism to a material entity.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0037559,anorectal lymph node,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:16669,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0037559,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,anorectal lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_03501133,homeless shelter,,An institutional building which temporarily houses homeless people.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:03501133,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,homeless shelter,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An institutional building which temporarily houses homeless people.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00003034,"populated place, Republic of South Africa",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00003034,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Republic of South Africa",http://purl.obolibrary.org/obo/GAZ_00001094,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00005432,"populated place, Madagascar",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00005432,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Madagascar",http://purl.obolibrary.org/obo/GAZ_00001108,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000109,woodland area,pine grove|brigalow,"Land having a cover of trees, shrubs, or both.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Woodland|TGN:21641|TGN:21632|TGN:21631|SWEETRealm:Scrub|SWEETRealm:Break|LTER:503|Geonames:V.GRVPN|FTT:774|FTT:719|FTT:506|FTT:505|FTT:1083,,,,,,,,,,,,,,,,,,,,,,,,,,pine grove|brigalow,,,ENVO:00000109,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,woodland area,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Land having a cover of trees, shrubs, or both.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490223,"multicomponent adhesive, no solvent",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0223,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490223,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"multicomponent adhesive, no solvent",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00003775,"populated place, India",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00003775,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, India",http://purl.obolibrary.org/obo/GAZ_00002839,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510203,high protein food,,"A claim that a food is high in protein, and any claim likely to have the same meaning for the consumer, may only be made where at least 20 % of the energy value of the food is provided by protein [REGULATION (EC) No 1924/2006 Corrigendum 2007-01-18].",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0203,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510203,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,high protein food,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A claim that a food is high in protein, and any claim likely to have the same meaning for the consumer, may only be made where at least 20 % of the energy value of the food is provided by protein [REGULATION (EC) No 1924/2006 Corrigendum 2007-01-18].",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100866,varskip-vss1a strategy,VarSkip 1a,An amplicon strategy which targets SARS-CoV-2 and was developed by New England BioLabs using PrimalSeq to reduce effects of variants with the attributes of version 1a short.,FALSE,,,,,,,varskip-vss1a|varskip vss1a,,,,,,,,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,VarSkip 1a,,,,GENEPIO:0100866,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2026-04-13T19:52:38.515Z,,,,,,,,,,,,,,,,,,,varskip-vss1a strategy,,,,,,,,,,,,,,,,,,,,,,https://github.com/nebiolabs/VarSkip,,,,,,,,,,An amplicon strategy which targets SARS-CoV-2 and was developed by New England BioLabs using PrimalSeq to reduce effects of variants with the attributes of version 1a short.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01001055,environment associated with an animal part or small animal,,"An environmental system determined by part of a living or dead animal, or a whole small animal.",FALSE,,,,,,,Animal corpus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01001055,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,envoOmics|envoMeo|envoEmpo,,,,,,,,environment associated with an animal part or small animal,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An environmental system determined by part of a living or dead animal, or a whole small animal.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100514,AMR testing by contact email,antimicrobial resistance testing by contact email|AMR_testing_by_contact_email|AMR testing by contact email,A data field which describes the email of the individual or the individual's role in the organization that performed the antimicrobial resistance (AMR) testing.,FALSE,,,,,,,PCDS:amr_testing_by_contact_email,,,,,,,"PCDS: Provide the email associated with the listed contact. As personnel turnover may render an individual's email obsolete, it is more preferable to provide an address for a position or lab, to ensure accuracy of information and institutional memory. If the information is unknown or cannot be provided, leave blank or provide a null value.",,,,,,,,,,,,,,PCDS: johnnyblogs@lab.ca,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,antimicrobial resistance testing by contact email|AMR_testing_by_contact_email|AMR testing by contact email,antimicrobial resistance testing by contact email slot|antimicrobial resistance testing by contact email field|AMR testing by contact email slot,,,,GENEPIO:0100514,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-12-22T00:55:53.808Z,,,,,,,,,,,,,,,,,,,AMR testing by contact email,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the email of the individual or the individual's role in the organization that performed the antimicrobial resistance (AMR) testing.,,PCDS: The email of the individual or the individual's role in the organization that performed the antimicrobial resistance testing.,,,,,,
http://purl.obolibrary.org/obo/ARO_3004301,resistant antimicrobial phenotype,,A bacterial strain is said to be resistant to a given antibiotic when it is inhibited in vitro by a concentration of this drug that is associated with a high likelihood of therapeutic failure.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,R,,,,,,ARO:3004301,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/aro.owl,,,,,,,,,resistant antimicrobial phenotype,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A bacterial strain is said to be resistant to a given antibiotic when it is inhibited in vitro by a concentration of this drug that is associated with a high likelihood of therapeutic failure.,,,,resistant,,,,
http://purl.obolibrary.org/obo/ARO_3004414,agar diffusion bioautography,,The antimicrobial agent is transferred from a chromatogram to an agar plate previously inoculated with the test microorganism.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ARO:3004414,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/aro.owl,,,,,,,,,agar diffusion bioautography,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The antimicrobial agent is transferred from a chromatogram to an agar plate previously inoculated with the test microorganism.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0033310,Osmotic diarrhea,,"Osmotic diarrhea results from the presence of osmotically active, poorly absorbed solutes in the bowel lumen that inhibit normal water and electrolyte absorption.",FALSE,,,,,,,,,,,,,,"Osmotic diarrhea involves an unabsorbed substance that draws water from the plasma into the intestinal lumen along osmotic gradients. Secretory diarrhea results from disordered electrolyte transport and, despite the term, is more commonly caused by decreased absorption rather than net secretion. Inflammatory diseases cause diarrhea with exudative, secretory, or osmotic components.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0033310,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Osmotic diarrhea,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Osmotic diarrhea results from the presence of osmotically active, poorly absorbed solutes in the bowel lumen that inhibit normal water and electrolyte absorption.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C41256,Family Member,Family Member|FAMILY MEMBER,"Any of the individuals who are descended from a common progenitor, related by marriage or other legal tie, or by a feeling of closeness.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Family Member|FAMILY MEMBER,,,,NCIT:C41256,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Family Member,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Any of the individuals who are descended from a common progenitor, related by marriage or other legal tie, or by a feeling of closeness.",,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00005042,"populated place, Poland",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00005042,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Poland",http://purl.obolibrary.org/obo/GAZ_00002939,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00005040,Province (Poland),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00005040,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Province (Poland),http://purl.obolibrary.org/obo/GAZ_00002939,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001169,Well water - untreated,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001169,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Well water - untreated,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470162,disinfection by irradiation,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0162,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470162,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,disinfection by irradiation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C52009,Amniocentesis,Amniocentesis,A prenatal diagnostic procedure in which a small sample of amniotic fluid is removed from the uterus by a needle inserted into the abdomen. This procedure is used to detect various genetic abnormalities in the fetus and/or the sex of the fetus.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Amniocentesis,,,,NCIT:C52009,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Amniocentesis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A prenatal diagnostic procedure in which a small sample of amniotic fluid is removed from the uterus by a needle inserted into the abdomen. This procedure is used to detect various genetic abnormalities in the fetus and/or the sex of the fetus.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00004436,animal organ,,An organ that derives from an animal.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00004436,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,animal organ,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An organ that derives from an animal.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_4029,gastritis,,A stomach disease that is an inflammation of the lining of the stomach.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:4029,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,gastritis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A stomach disease that is an inflammation of the lining of the stomach.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03480026,packed in fat or oil,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=K0026,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03480026,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,packed in fat or oil,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000240,lamb shoulder (raw),,A raw lamb shoulder cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000240,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lamb shoulder (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw lamb shoulder cut.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01001899,reef,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01001899,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,reef,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02010111,piece of animal meat (with skin),,A piece of animal meat that contains skin.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02010111,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of animal meat (with skin),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A piece of animal meat that contains skin.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000347,veal leg (raw),,A raw veal leg.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000347,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,veal leg (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw veal leg.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530124,bavette,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0124,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530124,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,bavette,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001724,subject organism common name,,"The natural language (non-taxonomic) name of the type of organism (human or animal) that is the subject of a given investigation, study and/or specimen.",FALSE,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/COB_0000022,,,"Damion Dooley's note: as of 2017 this is a problematic field for NCBI Biosample because it is slotted into ""host"" field, yet field is listed as ""host common name"" which does not fit with requirement that scientific name be provided.",,,human; dog; horse,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001724,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,subject organism common name,,,,,,,,,,,,,,,,,,,,,,,,,,,,Person: Damion Dooley,,,,"The natural language (non-taxonomic) name of the type of organism (human or animal) that is the subject of a given investigation, study and/or specimen.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00001184,algae material,,Material which derives from algae (including single-celled microalgae and  multicellular macroalgae).,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://bioregistry.io/reference/siren:F10419,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00001184,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,algae material,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Material which derives from algae (including single-celled microalgae and  multicellular macroalgae).,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001798,NCBI BioSample culture identifier,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001798,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI BioSample culture identifier,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley|http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020456,piece of turkey organ (raw),,A raw piece of a turkey organ.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020456,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of turkey organ (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw piece of a turkey organ.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C114931,Healthy Preterm Newborn,Healthy Preterm Newborn,An age group comprised of healthy newborns whose only diagnoses are those related to prematurity.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Healthy Preterm Newborn,,,,NCIT:C114931,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Healthy Preterm Newborn,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An age group comprised of healthy newborns whose only diagnoses are those related to prematurity.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C114939,Extremely Preterm Infant,Extremely Preterm Infant|Extreme Immaturity,"An age group comprised of infants less than 28 weeks, 0 days gestational age.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Extremely Preterm Infant|Extreme Immaturity,,,,NCIT:C114939,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Extremely Preterm Infant,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An age group comprised of infants less than 28 weeks, 0 days gestational age.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C114930,Healthy Term Newborn,Healthy Term Newborn,"An age group comprised of infants delivered after full 37 weeks gestation whose 5 minute Apgar score was above 7, has no major congenital anomalies and was discharged home with mother without any additional diagnoses except for physiologic hyperbilirubinemia.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Healthy Term Newborn,,,,NCIT:C114930,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Healthy Term Newborn,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An age group comprised of infants delivered after full 37 weeks gestation whose 5 minute Apgar score was above 7, has no major congenital anomalies and was discharged home with mother without any additional diagnoses except for physiologic hyperbilirubinemia.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C114938,Late Preterm Infant,Near Term Infant|Late Preterm Infant,"An age group comprised of infants greater than or equal to 34 weeks, 0 days and less than 37 weeks, 0 days gestational age.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Near Term Infant|Late Preterm Infant,,,,NCIT:C114938,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Late Preterm Infant,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An age group comprised of infants greater than or equal to 34 weeks, 0 days and less than 37 weeks, 0 days gestational age.",,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0100545,hereditary neurological disease,neurogenetic disease,"A heterogeneous group of genetic conditions with Mendelian (autosomal dominant, recessive, or X-linked) or chromosomal etiology characterized by abnormalities in the brain, spinal cord, nerves, or muscles.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,neurogenetic disease,,,,MONDO:0100545,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,,,,,,,,,hereditary neurological disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A heterogeneous group of genetic conditions with Mendelian (autosomal dominant, recessive, or X-linked) or chromosomal etiology characterized by abnormalities in the brain, spinal cord, nerves, or muscles.",,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0024619,central nervous system infectious disorder,infectious disease of central nervous system|central nervous system infectious disorder|central nervous system infectious disease,"An infectious process that affects the brain and/or spinal cord. Representative examples include encephalitis, poliomyelitis, arachnoiditis, and meningitis.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4759823|SCTID:128117002|NCIT:C27582|MESH:D002494|MEDGEN:1684837|ICD9:349.89|GARD:0025438|EFO:1001456,,,,,,,,,,,,,,,,,,,,,,,,,infectious disease of central nervous system|central nervous system infectious disorder|central nervous system infectious disease,,,,MONDO:0024619,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#rare|http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar|http://purl.oboInOwllibrary.org/oboInOwl/mondo#gard_rare,,,,,,,,central nervous system infectious disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An infectious process that affects the brain and/or spinal cord. Representative examples include encephalitis, poliomyelitis, arachnoiditis, and meningitis.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_3385,bacterial vaginosis,,A vaginitis that is characterized by a grayish vaginal discharge usually of foul odor and the presence of Gardnerella vaginalis.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:3385,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,bacterial vaginosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A vaginitis that is characterized by a grayish vaginal discharge usually of foul odor and the presence of Gardnerella vaginalis.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490216,drawn can,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0216,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490216,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,drawn can,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001437,prior sarscov2 infection date,prior SARS-CoV-2 infection date,A prior infection data field which describes the date of diagnosis of the prior Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection.,FALSE,,,,,,,PCDS:prior_sarscov2_infection_date,,,,,,,PCDS: Provide the date that the most recent prior infection was diagnosed. Provide the prior SARS-CoV-2 infection date in ISO 8601 standard format 'YYYY-MM-DD'.,,,,,,,,,,,,,,PCDS: 2021-01-28,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,prior SARS-CoV-2 infection date,prior SARS-CoV-2 infection date slot,,,,GENEPIO:0001437,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,prior sarscov2 infection date,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A prior infection data field which describes the date of diagnosis of the prior Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection.,,PCDS: The date of diagnosis of the prior SARS-CoV-2 infection.,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490383,alkyd resin container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0383,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490383,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,alkyd resin container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002224,isolate preparation service,,An isolate preparation service prepares isolates for molecular sequencing.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002224,,,,,,,,,,,,,,2019-05-03T02:51:51Z,,,,,,,,,,,,,,,,,,,isolate preparation service,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,An isolate preparation service prepares isolates for molecular sequencing.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_26421,pyridines,,Any organonitrogen heterocyclic compound based on a pyridine skeleton and its substituted derivatives.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:26421,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,pyridines,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any organonitrogen heterocyclic compound based on a pyridine skeleton and its substituted derivatives.,,,,,,,,
http://purl.obolibrary.org/obo/CLO_0000220,immortal kidney-derived cell line cell,,An immortal cell line cell that derives from kidney.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CLO:0000220,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/clo.owl,,,,,,,,,immortal kidney-derived cell line cell,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Yue Liu, Yongqun He",,,,An immortal cell line cell that derives from kidney.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C70806,Telecommunication Address,telecomAddress|Telecommunication Address,The value for a particular telecommunication address used as the contact telecommunication information for a person or organization.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,telecomAddress|Telecommunication Address,,,,NCIT:C70806,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Telecommunication Address,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The value for a particular telecommunication address used as the contact telecommunication information for a person or organization.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001926,Roche LS454 platform,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI SRA: LS454,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001926,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Roche LS454 platform,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0002788,non-medical mask,,A face mask not manufactured according to medical equipment standards.,FALSE,,,,,,,cloth mask,,,,,,,,,,,,,,https://www.canada.ca/en/public-health/services/diseases/2019-novel-coronavirus-infection/prevention-risks/about-non-medical-masks-face-coverings.html,,,,,non-medical mask,,"A non-medical mask may contain fabrics that are not regulated for use in surgical masks or respirators, or may not be designed to form a seal around the nose and mouth.",,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0002788,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,non-medical mask,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://orcid.org/0000-0002-8844-9165,,,https://github.com/obi-ontology/obi/issues/1193,A face mask not manufactured according to medical equipment standards.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_9942,lymph node disease,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:9942,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,lymph node disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001472,breadth of coverage value,breadth of coverage value,"A data field which describes the percentage of the reference genome covered by the sequenced data, to a prescribed depth.",FALSE,,,,,,,PCDS:breadth_of_coverage_value,,,,,,,PCDS: Provide value as a percent.,,,,,,,,,,,,,,PCDS: 95,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,breadth of coverage value,breadth of coverage value slot,,,,GENEPIO:0001472,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,breadth of coverage value,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A data field which describes the percentage of the reference genome covered by the sequenced data, to a prescribed depth.",,"PCDS: The percentage of the reference genome covered by the sequenced data, to a prescribed depth.",,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100916,conductivity measurement value,conductivity measurement value,An environmental data field which describes the numerical value of a measurement of conductivity.,FALSE,,,,,,,PCDS:conductivity_measurement_value,,,,,,,PCDS: Provide the numerical value of the measured conductivity.,,,,,,,,,,,,,,PCDS: 1412,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,conductivity measurement value,conductivity measurement value slot,,,,GENEPIO:0100916,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,conductivity measurement value,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the numerical value of a measurement of conductivity.,,PCDS: The numerical value of a measurement of conductivity.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002002,draft tuberculosis - case risk factors,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002002,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,draft tuberculosis - case risk factors,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020212,piece of chicken meat (with bone),,A piece of chicken meat that contains bone material.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020212,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of chicken meat (with bone),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A piece of chicken meat that contains bone material.,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000121,Minianka,,A Senufo population with a population size of 0.74 million,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000121,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Minianka,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Senufo population with a population size of 0.74 million,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000127,Mijikenda,,A Bantu Eastern population with a population size of 2.488 Millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000127,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Mijikenda,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Bantu Eastern population with a population size of 2.488 Millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000128,Fang,,A Bantu Central population with a population size of 1 million,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000128,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Fang,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Bantu Central population with a population size of 1 million,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000123,Herero,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000123,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Herero,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000125,Hausa,,"A Western African, Eastern African population with a population size of 90 millions",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000125,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Hausa,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A Western African, Eastern African population with a population size of 90 millions",,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000126,Nuer,,The Nuer are a Nilotic Eastern population with a population size of 3 million.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000126,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Nuer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The Nuer are a Nilotic Eastern population with a population size of 3 million.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0001903,email address of specimen provider principal investigator,,An email address of the principal investigator providing the specimens for the investigation,FALSE,,,,,,,,,,,,,,,,,,,,,NIAID GSCID-BRC metadata working group,,,,,email address of specimen provider principal investigator,,,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0001903,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,email address of specimen provider principal investigator,,,,,,,Sample Provider PI's email,,,,,,,,,,,,,,,,,,,,,"PERSON: Chris Stoeckert, Jie Zheng",,,,An email address of the principal investigator providing the specimens for the investigation,,,,specimen provider PI email,,,,
http://purl.obolibrary.org/obo/FOODON_02020431,piece of turkey (skinless),,A piece of turkey that is skinless.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020431,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of turkey (skinless),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A piece of turkey that is skinless.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020428,piece of turkey,,A severed part of a turkey.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020428,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of turkey,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A severed part of a turkey.,,,,,,,,
http://purl.obolibrary.org/obo/MP_0001790,abnormal immune system physiology,immune system: response/ function abnormalities|immune system/response abnormalities,deviation from the normal function of the immune system,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GO:0006955,,,,,,,,,,,,,,,,,,,,,,,MP:0001789,,immune system: response/ function abnormalities|immune system/response abnormalities,,,,MP:0001790,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mp.owl,,,,,,,,,abnormal immune system physiology,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,deviation from the normal function of the immune system,,,,,,,,
http://purl.obolibrary.org/obo/BTO_0000067,kidney cell line,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,BTO:0000067,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/bto.owl,,,,,,,,,kidney cell line,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100240,agricultural event exposure datum,,A human social gathering at which humans gather for a planned or social occasion to carry out activities relevant to agriculture.,FALSE,,,,,,,Agricultural Event,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100240,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,agricultural event exposure datum,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A human social gathering at which humans gather for a planned or social occasion to carry out activities relevant to agriculture.,,,,,,,,
http://purl.obolibrary.org/obo/GO_0005575,cellular_component,,"A location, relative to cellular compartments and structures, occupied by a macromolecular machine. There are three types of cellular components described in the gene ontology: (1) the cellular anatomical entity where a gene product carries out a molecular function (e.g., plasma membrane, cytoskeleton) or membrane-enclosed compartments (e.g., mitochondrion); (2) virion components, where viral proteins act, and (3) the stable macromolecular complexes of which gene product are parts (e.g., the clathrin complex).",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GO:0005575,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/cob.owl,,,,,,,,,cellular_component,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A location, relative to cellular compartments and structures, occupied by a macromolecular machine. There are three types of cellular components described in the gene ontology: (1) the cellular anatomical entity where a gene product carries out a molecular function (e.g., plasma membrane, cytoskeleton) or membrane-enclosed compartments (e.g., mitochondrion); (2) virion components, where viral proteins act, and (3) the stable macromolecular complexes of which gene product are parts (e.g., the clathrin complex).",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03460127,lipolytic fermentation,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=H0127,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03460127,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lipolytic fermentation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001249,food specimen,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001249,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,food specimen,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02021762,"pork roast (boneless, seasoned, fresh frozen)",,"A boneless, seasoned and freshly frozen pork roast.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02021762,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"pork roast (boneless, seasoned, fresh frozen)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A boneless, seasoned and freshly frozen pork roast.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_9909,hordeolum,,An eyelid disease that is characterized by an infection of the sebaceous glands at the base of the eyelashes. Styes are generally caused by a Staphylococcus aureus bacterial infection.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:9909,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,hordeolum,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An eyelid disease that is characterized by an infection of the sebaceous glands at the base of the eyelashes. Styes are generally caused by a Staphylococcus aureus bacterial infection.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0033343,Mucoid diarrhea,Mucous diarrhoea|Mucous diarrhea,"Passage of an increased number of stools containing mucus, a thick fluid substance secreted by mucous membranes.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Mucous diarrhoea|Mucous diarrhea,,,,HP:0033343,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Mucoid diarrhea,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Passage of an increased number of stools containing mucus, a thick fluid substance secreted by mucous membranes.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100286,specimen processing,,"A specimen datum which describes the collection, isolate production, sequencing, or storage of specimen material or data.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100286,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,specimen processing,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A specimen datum which describes the collection, isolate production, sequencing, or storage of specimen material or data.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001758,obsolete: millisiemens,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001758,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: millisiemens,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/UO_0010002,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C308,Immunotherapeutic Agent,Immunotherapy Agent|Immunotherapy|Immunotherapeutic Drug|Immunotherapeutic Agent|Immunopotentiators|Immunomodulatory Agent|Immunomodulators|Immunomodulating Agent|Immune Regulators|Immune Modulators|Immune Mediators|Biomodulators|Biological Response Modifier|BRM,"Any substance that induces, enhances, restores or suppresses the host's immune system, or an agent that utilizes or is derived from a component of the immune system.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Immunotherapy Agent|Immunotherapy|Immunotherapeutic Drug|Immunotherapeutic Agent|Immunopotentiators|Immunomodulatory Agent|Immunomodulators|Immunomodulating Agent|Immune Regulators|Immune Modulators|Immune Mediators|Biomodulators|Biological Response Modifier|BRM,,,,NCIT:C308,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Immunotherapeutic Agent,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Any substance that induces, enhances, restores or suppresses the host's immune system, or an agent that utilizes or is derived from a component of the immune system.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100208,ward exposure process,,A process occuring within or in the vicinity of a hospital ward that exposes the recipient organism to a material entity.,FALSE,,,,,,,Ward,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100208,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,ward exposure process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A process occuring within or in the vicinity of a hospital ward that exposes the recipient organism to a material entity.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001417,exposure event,exposure event,A data field which describes an event leading to exposure.,FALSE,,,,,,,PCDS:exposure_event,,,,,,,"PCDS: If known, select the exposure event from the pick list.",,,,,,,,,,,,,,PCDS: Party,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,exposure event,exposure event slot,,,,GENEPIO:0001417,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,exposure event,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes an event leading to exposure.,,PCDS: Event leading to exposure.,,,,,,
http://www.ebi.ac.uk/efo/EFO_0021780,age at initiation of hormone replacement therapy,,"Age at initiation of hormone replacement therapy, the therapeutic use of hormones to alleviate the effects of hormone deficiency.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,efo:EFO_0021780,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age at initiation of hormone replacement therapy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Age at initiation of hormone replacement therapy, the therapeutic use of hormones to alleviate the effects of hormone deficiency.",,,,,,,,
http://purl.obolibrary.org/obo/OMIT_0026008,Ribosome Inactivating Proteins,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OMIT:0026008,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/omit.owl,,,,,,,,,Ribosome Inactivating Proteins,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C35016,Shock,Shock|Circulatory Collapse,"A life-threatening condition that requires immediate medical intervention. It is characterized by reduced blood flow that may result in damage of multiple organs. Types of shock include cardiogenic, hemorrhagic, septic, anaphylactic, and traumatic shock.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Shock|Circulatory Collapse,,,,NCIT:C35016,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Shock,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A life-threatening condition that requires immediate medical intervention. It is characterized by reduced blood flow that may result in damage of multiple organs. Types of shock include cardiogenic, hemorrhagic, septic, anaphylactic, and traumatic shock.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100797,total dissolved solids measurement,total dissolved solids (TDS) measurement value,An environmental data field which describes the numerical value from a total dissolved solids (TDS) test.,FALSE,,,,,,,PCDS:total_dissolved_solids_tds_measurement_value,,,,,,,PCDS: Provide the numerical value of the measured TDS.,,,,,,,,,,,,,,PCDS: 2,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,total dissolved solids (TDS) measurement value,total dissolved solids (TDS) measurement value slot,,,,GENEPIO:0100797,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-21T01:14:47.111Z,,,,,,,,,,,,,,,,,,,total dissolved solids measurement,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the numerical value from a total dissolved solids (TDS) test.,,PCDS: The numerical value from a total dissolved solids (TDS) test.,,,,,,
http://purl.obolibrary.org/obo/ENVO_01001784,compound astronomical body part,,"A part of an astronomical body which is composed of a continuous medium bearing liquid, gaseous, and solid material in variable quantities.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01001784,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,compound astronomical body part,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A part of an astronomical body which is composed of a continuous medium bearing liquid, gaseous, and solid material in variable quantities.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530140,tranche grasse,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0140,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530140,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,tranche grasse,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02010209,piece of light animal meat,,A piece of light meat that comes from an animal breast or wing.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02010209,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of light animal meat,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A piece of light meat that comes from an animal breast or wing.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C27550,Non-Neoplastic Digestive System Disorder,Non-Neoplastic Gastrointestinal System Disorder|Non-Neoplastic Gastrointestinal Disorder|Non-Neoplastic Digestive System Disorder,"A non-neoplastic disorder that affects the gastrointestinal tract, anus, liver, biliary system, and pancreas. Representative examples include infections, ulcers, cirrhosis, and diverticulosis.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Non-Neoplastic Gastrointestinal System Disorder|Non-Neoplastic Gastrointestinal Disorder|Non-Neoplastic Digestive System Disorder,,,,NCIT:C27550,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Non-Neoplastic Digestive System Disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A non-neoplastic disorder that affects the gastrointestinal tract, anus, liver, biliary system, and pancreas. Representative examples include infections, ulcers, cirrhosis, and diverticulosis.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002156,subject age specification,,A value specification which describes the age since birth of a given organism that is involved in an investigation or study at a given time.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002156,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0002077,,,,,,subject age specification,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/OBI_0001169,,,,Damion Dooley,,,,A value specification which describes the age since birth of a given organism that is involved in an investigation or study at a given time.,,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000050,signal to noise ratio,,"signal to noise ratio is a measurement datum comparing the amount of meaningful, useful or interesting data (the signal) to the amount of irrelevant or false data (the noise). Depending on the field and domain of application, different variables will be used to determinate a 'signal to noise ratio'. In statistics, the definition of signal to noise ratio is the ratio of the mean of a measurement to its standard deviation. It thus corresponds to the inverse of the coefficient of variation",FALSE,,,,,,,,,,,,,,,,,,,,,"adapted from Wikipedia:
http://en.wikipedia.org/wiki/Signal-to-noise_ratio#Alternative_definition
last accessed: 2013-10-18",,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000050,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,signal to noise ratio,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra|Alejandra Gonzalez-Beltran|Orlaith Burke,,,,"signal to noise ratio is a measurement datum comparing the amount of meaningful, useful or interesting data (the signal) to the amount of irrelevant or false data (the noise). Depending on the field and domain of application, different variables will be used to determinate a 'signal to noise ratio'. In statistics, the definition of signal to noise ratio is the ratio of the mean of a measurement to its standard deviation. It thus corresponds to the inverse of the coefficient of variation",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C166134,Adoptive Mother,Adoptive Mother,A female parent in the parent-child relationship established by a legal adoption proceeding.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Adoptive Mother,,,,NCIT:C166134,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Adoptive Mother,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A female parent in the parent-child relationship established by a legal adoption proceeding.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C166133,Adoptive Father,Adoptive Father,A male parent in the parent-child relationship established by a legal adoption proceeding.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Adoptive Father,,,,NCIT:C166133,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Adoptive Father,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A male parent in the parent-child relationship established by a legal adoption proceeding.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100061,inability to arouse,inability to stay awake,Inability to arouse in response to one or more external stimuli.,FALSE,,,,,,,Inability to arouse (inability to stay awake),,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,inability to stay awake,,,,GENEPIO:0100061,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,inability to arouse,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Inability to arouse in response to one or more external stimuli.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100735,polymerase chain reaction (PCR) marker detection characterization tag,Polymerase chain reaction (PCR) marker detection data type|PCR marker detection data type,A molecular characterization data tag which indicates the presence of polymerase chain reaction (PCR) marker detection characterization data.,FALSE,,,,,,,PCR marker detection,,,,,,,Example Guidance: Use this tag to indicate additional data is available that provides characterization information from PCR marker detection.,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,Polymerase chain reaction (PCR) marker detection data type|PCR marker detection data type,,,,GENEPIO:0100735,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-05-18T19:08:34.869Z,,,,,,,,,,,,,,,,,,,polymerase chain reaction (PCR) marker detection characterization tag,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A molecular characterization data tag which indicates the presence of polymerase chain reaction (PCR) marker detection characterization data.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100239,convocation exposure datum,,A human social gathering in which a group of humans formally assemble for a specific purpose.,FALSE,,,,,,,Convocation,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Convocation,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100239,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,convocation exposure datum,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A human social gathering in which a group of humans formally assemble for a specific purpose.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510026,human as food consumer,,Food produced and marketed for human use.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0026,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510026,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,human as food consumer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Food produced and marketed for human use.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490222,multicomponent adhesive,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0222,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490222,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,multicomponent adhesive,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ARO_3004416,agar overlay bioautography,agar overlay bioassay,The TLC plate is covered with a molten agar medium seeded with the test microbe and the antimicrobial compounds are allowed to diffuse onto the agar medium. Tetrazolium dye staining allows for visualization.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,agar overlay bioassay,,,,ARO:3004416,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/aro.owl,,,,,,,,,agar overlay bioautography,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The TLC plate is covered with a molten agar medium seeded with the test microbe and the antimicrobial compounds are allowed to diffuse onto the agar medium. Tetrazolium dye staining allows for visualization.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_26020,phosphate,,"Salts and esters of phosphoric and oligophosphoric acids and their chalcogen analogues. In inorganic chemistry, the term is also used to describe anionic coordination entities with phosphorus as central atom.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:26020,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,phosphate,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Salts and esters of phosphoric and oligophosphoric acids and their chalcogen analogues. In inorganic chemistry, the term is also used to describe anionic coordination entities with phosphorus as central atom.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_33822,organic hydroxy compound,,An organic compound having at least one hydroxy group attached to a carbon atom.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:64710,,,,,,CHEBI:33822,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,organic hydroxy compound,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An organic compound having at least one hydroxy group attached to a carbon atom.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C171562,COVID-19-Associated Coagulation Disorder,SARS-CoV-2-Associated Coagulopathy|SARS-CoV-2-Associated Coagulation Disorder|COVID-19-Associated Coagulopathy|COVID-19-Associated Coagulation Disorder,Coagulation disorder caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2).,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SARS-CoV-2-Associated Coagulopathy|SARS-CoV-2-Associated Coagulation Disorder|COVID-19-Associated Coagulopathy|COVID-19-Associated Coagulation Disorder,,,,NCIT:C171562,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,COVID-19-Associated Coagulation Disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Coagulation disorder caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2).,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490195,container or wrapping by form,,Classification corresponding to FSTA Thesaurus Packaging 3.1 Package Types,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0195,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490195,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,container or wrapping by form,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Classification corresponding to FSTA Thesaurus Packaging 3.1 Package Types,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00004478,beef retail cut,,"A cut of beef that is derived from a sub-primal, individual muscle cut or minor primal cut.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00004478,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef retail cut,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A cut of beef that is derived from a sub-primal, individual muscle cut or minor primal cut.",,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_947985,Mus musculus albula,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,Mus musculus albula,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:947985,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Mus musculus albula,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000456,bison shoulder clod (raw),,A raw bison shoulder clod.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000456,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,bison shoulder clod (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw bison shoulder clod.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00010130,"populated place, Cambodia",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00010130,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Cambodia",http://purl.obolibrary.org/obo/GAZ_00006888,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002112,draft sequence repository data - antibiogram MIC measurement,,This is a component of an antibiogram that enables a choice of MIC measurements based on either the diffusion or dilution method. These methods call for different numeric input ranges and units.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002112,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,draft sequence repository data - antibiogram MIC measurement,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,This is a component of an antibiogram that enables a choice of MIC measurements based on either the diffusion or dilution method. These methods call for different numeric input ranges and units.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100130,Pacific Biosciences sequencing instrument model,,A DNA sequencer manufactured by the Pacific Biosciences corporation.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100130,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,Pacific Biosciences sequencing instrument model,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A DNA sequencer manufactured by the Pacific Biosciences corporation.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020866,bison roast,,A retail cut of meat from a bison that is of a size for slicing into more than one portion and is suitable for roasting.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020866,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,bison roast,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A retail cut of meat from a bison that is of a size for slicing into more than one portion and is suitable for roasting.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038094,inferior rectal lymph node,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:276796,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0038094,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,inferior rectal lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038093,jejunal lymph node,jejunal mesentary lymph node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:276784,,,,,,,,,,,,,,,,,,,,,,,,,jejunal mesentary lymph node,,,,UBERON:0038093,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,jejunal lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000066,beef denver steak (raw),,A raw beef denver steak.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000066,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef denver steak (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef denver steak.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100776,water catchment area human population density value,water catchment human population density value,An environmental data field which describes the numerical value depicting the number of humans per geographical area in a water catchment.,FALSE,,,,,,,PCDS:water_catchment_area_human_population_density_value,,,,,,,PCDS: Provide the numerical value of the population density in the catchement area.,,,,,,,,,,,,,,PCDS: 4,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,water catchment human population density value,water catchment human population density value slot,,,,GENEPIO:0100776,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,water catchment area human population density value,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the numerical value depicting the number of humans per geographical area in a water catchment.,,PCDS: The numerical value describing the number of humans per geographical area in a water catchment.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002024,subject health status (UK NHS),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002024,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,subject health status (UK NHS),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,depth:1,,,,,
http://purl.obolibrary.org/obo/PATO_0001585,conductivity,,A physical quality inhering in a bearer by virtue of the bearer's disposition to transmit of an entity through a medium.,FALSE,,,,,,,,,,,,,,Examples could be heat or electricity or sound.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PATO:0001585,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/pato.owl,http://purl.oboInOwllibrary.org/oboInOwl/pato#scalar_slim|http://purl.oboInOwllibrary.org/oboInOwl/pato#disposition_slim|http://purl.oboInOwllibrary.org/oboInOwl/pato#attribute_slim,,,,,,,,conductivity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A physical quality inhering in a bearer by virtue of the bearer's disposition to transmit of an entity through a medium.,,,,,,,,
http://purl.obolibrary.org/obo/OBA_2055790,age of onset of cardiovascular disorder,age cardiovascular disorder symptoms begin|age at onset of cardiovascular disorder,The age at which cardiovascular disorder manifestations first appear.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,age cardiovascular disorder symptoms begin|age at onset of cardiovascular disorder,,,,OBA:2055790,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age of onset of cardiovascular disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The age at which cardiovascular disorder manifestations first appear.,,,,,,,,
http://purl.obolibrary.org/obo/UO_1000100,cubic decimeter based unit,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:1000100,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,cubic decimeter based unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000195,beef brisket point half,,A beef sub-primal cut that is the less lean half of the whole Brisket.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000195,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef brisket point half,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A beef sub-primal cut that is the less lean half of the whole Brisket.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0002012,PacBio RS II,,"A DNA sequencer which is manufactured by the Pacific Biosciences corporation. Built upon single molecule real-time sequencing technology, the machine is optimized for generation with long reads and high consensus accuracy.",FALSE,,,,,,,Pacific Biosciences RS II,,,,,,,,,,,,,,http://www.pacificbiosciences.com/products/,,,,,PacBio RS II,,"Spaethling, Jennifer M., and James H. Eberwine. ""Single-cell transcriptomics for drug target discovery."" Current opinion in pharmacology (2013). pmid:23725882",,,http://purl.obolibrary.org/obo/IAO_0000120,NCBI SRA: PacBio RS,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0002012,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PacBio RS II,,,,,,,,,,,,,,,,,,,,,,,,,,,,"PERSON: Venkat Malladi, Chris Stoeckert, Jie Zheng, Alan Ruttenberg",,,,"A DNA sequencer which is manufactured by the Pacific Biosciences corporation. Built upon single molecule real-time sequencing technology, the machine is optimized for generation with long reads and high consensus accuracy.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100635,antimicrobial field,antimicrobial slot,A data field which describes antimicrobial information.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,antimicrobial slot,,,,GENEPIO:0100635,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788,2022-12-22T00:55:53.808Z,,,,,,,,,,,,,,,,,,,antimicrobial field,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes antimicrobial information.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0025095,Sneeze,,"A sudden violent, spasmodic, audible expiration of breath through the nose and mouth.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0025095,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Sneeze,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A sudden violent, spasmodic, audible expiration of breath through the nose and mouth.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100708,pH measurement characterization tag,pH measurement characterization data tag,A chemical characterization data tag which indicates the presence of data that describes a measurement of pH.,FALSE,,,,,,,pH measurement,,,,,,,"Example Guidance: Use this tag to indicate additional data is available that provides characterization information from the measurement of pH, where pH is a numeric scale used to specify the acidity or basicity (alkalinity) of an aqueous solution.",,,,,,,,,,,"http://purl.obolibrary.org/obo/GENEPIO_0001736 used as a partial source for the ""Example Guidance"".",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,pH measurement characterization data tag,,,,GENEPIO:0100708,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-5275-8866,2023-05-18T19:08:34.869Z,,,,,,,,,,,,,,,,,,,pH measurement characterization tag,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A chemical characterization data tag which indicates the presence of data that describes a measurement of pH.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0012622,Chronic kidney disease,Chronic kidney disease|CKD,Functional anomaly of the kidney persisting for at least three months.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C1561643|UMLS:C0748318|SNOMEDCT_US:709044004,,,,,,,,,,,,,,,,,,,,,,,HP:0008671|HP:0001918|HP:0000106,,Chronic kidney disease|CKD,,,,HP:0012622,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Chronic kidney disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Functional anomaly of the kidney persisting for at least three months.,,,,,,,,
http://purl.obolibrary.org/obo/ARO_3004371,MIC value,,The measured or quantified MIC.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ARO:3004371,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/aro.owl,,,,,,,,,MIC value,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The measured or quantified MIC.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001623,draft NCBI isolate source location model,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001623,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,draft NCBI isolate source location model,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/OBA_2055788,age of onset of bronchus cancer,age bronchus cancer symptoms begin|age at onset of bronchus cancer,The age at which bronchus cancer manifestations first appear.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,age bronchus cancer symptoms begin|age at onset of bronchus cancer,,,,OBA:2055788,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age of onset of bronchus cancer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The age at which bronchus cancer manifestations first appear.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001451,flow cell barcode,flow cell barcode,A data field which describes the barcode of the flow cell used for sequencing.,FALSE,,,,,,,PCDS:flow_cell_barcode,,,,,,,PCDS: Provide the barcode of the flow cell used for sequencing the sample.,,,,,,,,,,,,,,PCDS: FAB06069,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,flow cell barcode,flow cell barcode slot,,,,GENEPIO:0001451,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,flow cell barcode,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the barcode of the flow cell used for sequencing.,,PCDS: The barcode of the flow cell used for sequencing.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001695,listeria serotype 3a,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001695,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,listeria serotype 3a,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03500021,polypropylene surface,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=N0021,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03500021,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,polypropylene surface,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/BTO_0000297,carcinoma cell line,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,BTO:0000297,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/bto.owl,,,,,,,,,carcinoma cell line,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_51914,organic heterohexacyclic compound,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:51914,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,organic heterohexacyclic compound,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000169,fold change,,Fold change is a number describing how much a quantity changes going from an initial to a final value or one condition to another condition,FALSE,,,,,,,,,,,,,,,,,,,,,http://en.wikipedia.org/wiki/Fold_change,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000169,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,fold change,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra|Alejandra Gonzalez-Beltran|Orlaith Burke,,,,Fold change is a number describing how much a quantity changes going from an initial to a final value or one condition to another condition,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03460777,selenium added claim,,A claim that selenium has been added to an edible product.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=H0777,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03460777,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,selenium added claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A claim that selenium has been added to an edible product.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510154,reduced sodium claim,,Food containing at least 25% less sodium per amount customarily consumed than the sodium content of a comparable food product. The comparable food may not be 'low sodium'.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0154,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510154,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,reduced sodium claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Food containing at least 25% less sodium per amount customarily consumed than the sodium content of a comparable food product. The comparable food may not be 'low sodium'.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0008944,albumen,egg white,"Albumen is the clear liquid contained within an egg and consists of water and proteins, among which are ovomucin and ovomucoid. It protects the egg yolk and provides additional nutrition for the growth of the embryo.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ncithesaurus:Egg_White|Wikipedia:Albumen|GO:0097099|BTO:0000370,,,,,,,,,,,,,,,,,,,,,,,,,egg white,,,,UBERON:0008944,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,albumen,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Albumen is the clear liquid contained within an egg and consists of water and proteins, among which are ovomucin and ovomucoid. It protects the egg yolk and provides additional nutrition for the growth of the embryo.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002468,string value specification,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002468,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,string value specification,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,string,,,,
http://purl.obolibrary.org/obo/CHEBI_28368,novobiocin,,A coumarin-derived antibiotic obtained from <em>Streptomyces niveus</em>.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:7644|CHEBI:44505|CHEBI:25597,,,,,,CHEBI:28368,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,novobiocin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A coumarin-derived antibiotic obtained from <em>Streptomyces niveus</em>.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000371,veal shoulder arm (raw),,A raw veal shoulder blade cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000371,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,veal shoulder arm (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw veal shoulder blade cut.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0008270,mollusc shell,,"A calcareous exoskeleton which encloses, supports and protects the soft parts of an animal in the phylum Mollusca, which includes snails, clams, tusk shells, and several other classes. Not all shelled molluscs live in the sea, many live on the land and in freshwater.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=N0053,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0008270,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,mollusc shell,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A calcareous exoskeleton which encloses, supports and protects the soft parts of an animal in the phylum Mollusca, which includes snails, clams, tusk shells, and several other classes. Not all shelled molluscs live in the sea, many live on the land and in freshwater.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03480035,packed in gelatin,,Gelatin which is used as a packing medium for food material.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=K0035,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03480035,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,packed in gelatin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Gelatin which is used as a packing medium for food material.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00002264,waste material,,A material which is not the desired output of a process and which is typically the input of a process which removes it from its producer (e.g. a disposal process).,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Waste|SWEETRealm:Waste|EcoLexicon:waste,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00002264,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,waste material,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A material which is not the desired output of a process and which is typically the input of a process which removes it from its producer (e.g. a disposal process).,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00002451,food transformation process,,A process involving the physical transformation of a food source or food product into some derived organic material or food product,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00002451,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food transformation process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A process involving the physical transformation of a food source or food product into some derived organic material or food product,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C25179,Hospitalization,Hospitalized|Hospitalization|HOSPITALIZATION,The condition of being treated as a patient in a hospital.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Hospitalized|Hospitalization|HOSPITALIZATION,,,,NCIT:C25179,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Hospitalization,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The condition of being treated as a patient in a hospital.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000356,veal rib roast,,A veal roast that is derived from the rib section.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000356,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,veal rib roast,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A veal roast that is derived from the rib section.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00004704,"populated place, Kenya",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00004704,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Kenya",http://purl.obolibrary.org/obo/GAZ_00001101,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00004706,Province (Kenya),,When an authorative list of Divisions of the new (2007) Districts is available this needs revision.,FALSE,,,,,,,,,,,,,,When an authorative list of Divisions of the new (2007) Districts is available this needs revision.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00004706,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Province (Kenya),http://purl.obolibrary.org/obo/GAZ_00001101,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_477815,Mus musculus musculus x M. m. domesticus,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,Mus musculus musculus x M. m. domesticus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:477815,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Mus musculus musculus x M. m. domesticus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_477816,Mus musculus musculus x Mus musculus castaneus,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,Mus musculus musculus x Mus musculus castaneus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:477816,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Mus musculus musculus x Mus musculus castaneus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002045,obsolete: antimicrobial resistance testing method,,The type of assay used to determine the minimum inhibitory concentration.,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002045,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: antimicrobial resistance testing method,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,http://purl.obolibrary.org/obo/NCIT_C85540,,,The type of assay used to determine the minimum inhibitory concentration.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510195,full fat claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0195,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510195,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,full fat claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02010112,"piece of animal meat (with skin, raw)",,A raw piece of animal meat that contains skin.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02010112,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"piece of animal meat (with skin, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw piece of animal meat that contains skin.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001133,umbrella bioproject accession,umbrella bioproject accession,An identifier field which describes the International Nucleotide Sequence Database Collaboration (INSDC) umbrella accession number of the BioProject to which the BioSample belongs.,FALSE,,,,,,,PCDS:umbrella_bioproject_accession,,,,,,,"PCDS: Required if submission is linked to an umbrella BioProject. An umbrella BioProject links together related BioProjects. A valid BioProject umbrella accession has prefix PRJN, PRJE or PRJD. Your laboratory can have one or many BioProjects.",,,,,,,,,,,,,,PCDS: PRJNA623807,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,umbrella bioproject accession,umbrella bioproject accession slot,,,,GENEPIO:0001133,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,umbrella bioproject accession,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An identifier field which describes the International Nucleotide Sequence Database Collaboration (INSDC) umbrella accession number of the BioProject to which the BioSample belongs.,,PCDS: The INSDC accession number assigned to the umbrella BioProject.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002165,subject disease specification,,"A value specification which describes the name of a disease in a subject that is related to a given investigation, study and/or specimen.",FALSE,,,,,,,,,,,,,,"Controlled vocabulary. Human specimen source: https://bioportal.bioontology.org/ontologies/DOID
or https://www.ncbi.nlm.nih.gov/mesh/1000067",,,,,,,NIAID GSCID-BRC metadata working group,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002165,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0001617,,,,,,subject disease specification,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/DOID_4,,,,Damion Dooley,,,,"A value specification which describes the name of a disease in a subject that is related to a given investigation, study and/or specimen.",,,,,,,,
http://purl.obolibrary.org/obo/OBI_0002804,nitrile glove,,A personal protective glove which is made out of nitrile rubber.,FALSE,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Medical_glove,,,,,nitrile glove,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0002804,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,nitrile glove,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://orcid.org/0000-0002-8844-9165,,,https://github.com/obi-ontology/obi/issues/1193,A personal protective glove which is made out of nitrile rubber.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490301,stainless steel container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0301,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490301,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,stainless steel container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0080015,physical disorder,,"A disease that has_material_basis_in a genetic abnormality, error with embryonic development, infection or compromised intrauterine environment.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0080015,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,physical disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A disease that has_material_basis_in a genetic abnormality, error with embryonic development, infection or compromised intrauterine environment.",,,,,,,,
http://semanticscience.org/resource/SIO_010057,life status,,life status is the quality of whether something is alive or dead.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,resource:SIO_010057,,,,,,,,,,,,,,,,,,,,,,,,http://semanticscience.org/ontology/sio.owl,,,,,,,,,life status,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,life status is the quality of whether something is alive or dead.,,,lookup|depth:1,,,,,
http://purl.obolibrary.org/obo/CHEBI_3732,clarithromycin,,"The 6-<em>O</em>-methyl ether of erythromycin A, clarithromycin is a macrolide antibiotic used in the treatment of respiratory-tract, skin and soft-tissue infections. It is also used to eradicate <em>Helicobacter pylori</em> in the treatment of peptic ulcer disease. It prevents bacteria from growing by interfering with their protein synthesis.",FALSE,,,,,,,Clr,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:670147|CHEBI:442148|CHEBI:41676,,,,,,CHEBI:3732,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,clarithromycin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The 6-<em>O</em>-methyl ether of erythromycin A, clarithromycin is a macrolide antibiotic used in the treatment of respiratory-tract, skin and soft-tissue infections. It is also used to eradicate <em>Helicobacter pylori</em> in the treatment of peptic ulcer disease. It prevents bacteria from growing by interfering with their protein synthesis.",,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_48409,Salmonella enterica subsp. enterica serovar Virchow,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,Salmonella enterica subsp. enterica serovar Virchow,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:48409,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Salmonella enterica subsp. enterica serovar Virchow,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001244,food specimen detail,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001244,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,food specimen detail,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001240,obsolete: host sample material,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001240,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: host sample material,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,http://purl.obolibrary.org/obo/GENEPIO_0000028|http://purl.obolibrary.org/obo/GENEPIO_0000025,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0001825,paranasal sinus,sinus,The paired air-filled cavities surrounded by the bones of the face that are lined by mucous membranes and are continuous with the nasal cavity.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Paranasal_sinuses|UMLS:C0030471|SCTID:181203001|NCIT:C12763|MESH:D010256|MA:0000431|GAID:355|FMA:59679|EV:0100038|EMAPA:35662|EHDAA:6489|CALOHA:TS-2082,,,,,,,,,,,,,,,,,,,,,,,,sinus,,,,,UBERON:0001825,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,paranasal sinus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The paired air-filled cavities surrounded by the bones of the face that are lined by mucous membranes and are continuous with the nasal cavity.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0001827,secretion of lacrimal gland,tears|tear|lacrimal secretion|lacrimal gland secretion|lacrimal fluid,Aqueous substance secreted by the lacrimal gland.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:Tears|galen:Tear|Wikipedia:Tear|UMLS:C0039409|NCIT:C33739|MESH:D013666|MA:0002508|GAID:1173|FMA:59756|ENVO:02000034|EMAPA:36537|CALOHA:TS-1016|BTO:0001499,,,,,,,,,,,,,,,,,,,,,,,,,tears|tear|lacrimal secretion|lacrimal gland secretion|lacrimal fluid,,,,UBERON:0001827,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,secretion of lacrimal gland,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Aqueous substance secreted by the lacrimal gland.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0015469,splenic lymph node,,"The splenic lymph nodes (or pancreaticolienal) accompany the lienal (splenic) artery, and are situated in relation to the posterior surface and upper border of the pancreas; one or two members of this group are found in the gastrolienal ligament. Their afferents are derived from the stomach, spleen, and pancreas, their efferents join the celiac group of preaortic glands.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Splenic_lymph_nodes|SCTID:80088008|MA:0003074|FMA:66187,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0015469,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,splenic lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The splenic lymph nodes (or pancreaticolienal) accompany the lienal (splenic) artery, and are situated in relation to the posterior surface and upper border of the pancreas; one or two members of this group are found in the gastrolienal ligament. Their afferents are derived from the stomach, spleen, and pancreas, their efferents join the celiac group of preaortic glands.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_209807,cefoxitin,,"A semisynthetic cephamycin antibiotic which, in addition to the methoxy group at the 7α position, has 2-thienylacetamido and carbamoyloxymethyl side-groups. It is resistant to β-lactamase.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:658070|CHEBI:471714|CHEBI:41436|CHEBI:3500,,,,,,CHEBI:209807,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,cefoxitin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A semisynthetic cephamycin antibiotic which, in addition to the methoxy group at the 7α position, has 2-thienylacetamido and carbamoyloxymethyl side-groups. It is resistant to β-lactamase.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00002502,ham food product,,"Ham is pork from a leg cut that has been preserved by wet or dry curing, with or without smoking.  As a processed meat, the term ""ham"" includes both whole cuts of meat and ones that have been mechanically formed.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00002502,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,ham food product,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Ham is pork from a leg cut that has been preserved by wet or dry curing, with or without smoking.  As a processed meat, the term ""ham"" includes both whole cuts of meat and ones that have been mechanically formed.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C27197,Acute Pneumonia,Acute Pneumonia,"Acute inflammation of the lung parenchyma caused by viruses, bacteria, fungi, radiation treatment, or exposure to chemicals.  Signs and symptoms include cough, shortness of breath, fevers, chills, chest pain, headache, sweating, and weakness.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Acute Pneumonia,,,,NCIT:C27197,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Acute Pneumonia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Acute inflammation of the lung parenchyma caused by viruses, bacteria, fungi, radiation treatment, or exposure to chemicals.  Signs and symptoms include cough, shortness of breath, fevers, chills, chest pain, headache, sweating, and weakness.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020368,butchery cut of chicken,,A piece of chicken meat which has been cut according to butchery practice.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020368,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,butchery cut of chicken,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A piece of chicken meat which has been cut according to butchery practice.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002035,centre point,,A centre point is a point used in the description of an n-dimentional entity from which other (given) aspects of the entity are most efficienty described. A point of symmetry.  The entity must have only one such point.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,Probably a better formal math defn?,,,"Centre of circle, ellipse or parabola; centre of mass.",,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002035,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,centre point,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A centre point is a point used in the description of an n-dimentional entity from which other (given) aspects of the entity are most efficienty described. A point of symmetry.  The entity must have only one such point.,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0019056,neuromuscular disease,neuromuscular disease|nerve and muscle disorder,"Any disease that impairs the functioning of the muscles, either directly, being pathologies of the voluntary muscle, or indirectly, being pathologies of nerves or neuromuscular junctions",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0027868|Orphanet:68381|NANDO:2100214|NANDO:1100001|MedDRA:10029323|MESH:D009468|MEDGEN:10323|ICD9:358.9|ICD9:358|EFO:1001902|DOID:440,,,,,,,,,,,,,,,,,,,,,,,,,neuromuscular disease|nerve and muscle disorder,,,,MONDO:0019056,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar|http://purl.oboInOwllibrary.org/oboInOwl/mondo#ordo_group_of_disorders|http://purl.oboInOwllibrary.org/oboInOwl/mondo#disease_grouping|http://purl.oboInOwllibrary.org/oboInOwl/mondo#clingen,,,,,,,,neuromuscular disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Any disease that impairs the functioning of the muscles, either directly, being pathologies of the voluntary muscle, or indirectly, being pathologies of nerves or neuromuscular junctions",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100084,tachyarrhythmia,,A disorder characterized by an arrhythmia with an above normal rate.,FALSE,,,,,,,,,,,,,,,,,,,,,https://ncit.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&version=21.09d&ns=ncit&code=C110938&key=n2078840696&b=1&n=null,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100084,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,tachyarrhythmia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A disorder characterized by an arrhythmia with an above normal rate.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00009419,Province (Zambia),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00009419,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Province (Zambia),http://purl.obolibrary.org/obo/GAZ_00001107,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/COB_0000035,completely executed planned process,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,COB:0000035,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl|http://purl.obolibrary.org/obo/cob.owl,,,,,,,,,completely executed planned process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020207,piece of chicken meat (skinless),,A piece of skinless chicken meat.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020207,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of chicken meat (skinless),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A piece of skinless chicken meat.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530005,food datum,,A data item consisting of a claim or record of a food product's origin or processing history or suitability for some purpose.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0005|http://www.langual.org/langual_thesaurus.asp?termid=Z0001,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530005,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food datum,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data item consisting of a claim or record of a food product's origin or processing history or suitability for some purpose.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00008577,"populated place, Dijubti",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00008577,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Dijubti",http://purl.obolibrary.org/obo/GAZ_00000582,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100704,feed history documentation tag,feed history data type,A documentation data tag which indicates the presence of data that describes feed history.,FALSE,,,,,,,feed history,,,,,,,Example Guidance: Use this tag to indicate additional data is available that provides a history of food material given to meet nutritional requirements.,,,,,,,,,,,"http://purl.obolibrary.org/obo/ENVO_02000047 used as a partial source for the ""Example Guidance"".",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,feed history data type,,,,GENEPIO:0100704,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-05-18T19:08:34.869Z,,,,,,,,,,,,,,,,,,,feed history documentation tag,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A documentation data tag which indicates the presence of data that describes feed history.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0002803,medical glove,,A personal protective glove which is disposable and is used during medical examinations and procedures to help prevent cross-contamination between caregivers and patients.,FALSE,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Medical_glove,,,,,medical glove,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0002803,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,medical glove,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://orcid.org/0000-0002-8844-9165,,,https://github.com/obi-ontology/obi/issues/1193,A personal protective glove which is disposable and is used during medical examinations and procedures to help prevent cross-contamination between caregivers and patients.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100124,Illumina MiniSeq,,A DNA sequencer which is manufactured by the Illumina corporation using sequence-by-synthesis chemistry that fits on a benchtop and has an output capacity of 1.65-7.5 Gb.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100124,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,Illumina MiniSeq,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A DNA sequencer which is manufactured by the Illumina corporation using sequence-by-synthesis chemistry that fits on a benchtop and has an output capacity of 1.65-7.5 Gb.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_29013,fusidic acid,,A steroid antibiotic that is isolated from the fermentation broth of <em>Fusidium coccineum</em>.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:5201|CHEBI:42742|CHEBI:24133,,,,,,CHEBI:29013,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,fusidic acid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A steroid antibiotic that is isolated from the fermentation broth of <em>Fusidium coccineum</em>.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_22478,amino alcohol,,An alcohol containing an amino functional group in addition to the alcohol-defining hydroxy group.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:22478,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,amino alcohol,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An alcohol containing an amino functional group in addition to the alcohol-defining hydroxy group.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490297,aluminum coextruded with paper,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0297,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490297,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,aluminum coextruded with paper,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100599,gene name,,A sequence data which is the name of a gene (typically) assigned by a person and/or according to a naming scheme.,FALSE,,,,,,,,,,,,,,,,,,,,,http://edamontology.org/data_2299,,,,,gene name,,Gyrase A,,,ready for release,http://purl.obolibrary.org/obo/OBI_0002878,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100599,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,gene name,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-1107-9135,,,https://github.com/obi-ontology/obi/issues/1579,A sequence data which is the name of a gene (typically) assigned by a person and/or according to a naming scheme.,,,,,,,,
http://purl.obolibrary.org/obo/ARO_3004407,Siemens,,Specific vendor of automated system of analysis for determining antimicrobial susceptibility headquartered in Berlin and Munich.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ARO:3004407,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/aro.owl,,,,,,,,,Siemens,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Specific vendor of automated system of analysis for determining antimicrobial susceptibility headquartered in Berlin and Munich.,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0024883,metastatic neoplasm,metastatic tumour|metastatic tumor|metastatic neoplasm|metastatic disease,"A tumor that has spread from its original (primary) site of growth to another site, close to or distant from the primary site. Metastasis is characteristic of advanced malignancies, but in rare instances can be seen in neoplasms lacking malignant morphology.",FALSE,,,,,,,,,,,,,,"Note that we currently treat secondary neoplasms as being neoplastic diseases that are derived from neoplasm; classes such as 'neoplasm', 'carcinoma' are implicitly primary. This may change in future.",,,,,,,,,,,,,,,,,,UMLS:C2939420|NCIT:C3261|MEDGEN:422476|ICDO:8000/6|EFO:0009709,,,,,,,,,,,,,,,,,,,,,,,,,metastatic tumour|metastatic tumor|metastatic neoplasm|metastatic disease,,,,MONDO:0024883,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,metastatic neoplasm,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A tumor that has spread from its original (primary) site of growth to another site, close to or distant from the primary site. Metastasis is characteristic of advanced malignancies, but in rare instances can be seen in neoplasms lacking malignant morphology.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000461,buffalo top round steak,,A steak cut from the buffalo top round.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000461,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,buffalo top round steak,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A steak cut from the buffalo top round.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0000315,Abnormality of the orbital region,Malformation of the orbital region of the face|Deformity of the orbital region of the face|Anomaly of the orbital region of the face,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4025863,,,,,,,,,,,,,,,,,,,,,,,HP:0000284,,Abnormality of the region around the eyes|Abnormality of the eye region,Malformation of the orbital region of the face|Deformity of the orbital region of the face|Anomaly of the orbital region of the face,,,HP:0000315,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormality of the orbital region,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00002918,French Polynesia,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,INSDC:country:french polynesia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00002918,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,French Polynesia,http://purl.obolibrary.org/obo/GAZ_00051089|http://purl.obolibrary.org/obo/GAZ_00005861,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_33839,macromolecule,,"A macromolecule is a molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:33839,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,macromolecule,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A macromolecule is a molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0101003,Weep fluid collection (pouring),,A specimen collection process that is used to collect weep fluid via pouring from the source container into the sample collection device. (e.g. bag or tube),FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0101003,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2026-04-13T19:52:38.515Z,,,,,,,,,,,,,,,,,,,Weep fluid collection (pouring),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A specimen collection process that is used to collect weep fluid via pouring from the source container into the sample collection device. (e.g. bag or tube),,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020844,piece of bison (raw),,A raw piece of bison.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020844,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of bison (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw piece of bison.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00003382,"populated place, Metropolitan France",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00003382,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Metropolitan France",http://purl.obolibrary.org/obo/GAZ_00003940,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0000679,average value,,A  data item that is produced as the output of an averaging data transformation and represents the average value of the input data.,FALSE,,,,,,,arithmetic mean,,,,,,,,,,,,,,,,,,,average value,,,,,http://purl.obolibrary.org/obo/IAO_0000125,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0000679,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,average value,,,,,,,,,,,,,,,,,,,,,,,,,,,,PERSON: Monnie McGee|PERSON: James Malone,,,,A  data item that is produced as the output of an averaging data transformation and represents the average value of the input data.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490414,leaf fibre container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0414,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490414,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,leaf fibre container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_1232152,Escherichia coli O103:H11,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,Escherichia coli O103:H11,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:1232152,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Escherichia coli O103:H11,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_2965,bursitis,,"A connective tissue disease that is characterized by the inflammation of bursae, small, fluid-filled sacs that cushion the bones, tendons and muscles near your joints.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:2965,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,bursitis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A connective tissue disease that is characterized by the inflammation of bursae, small, fluid-filled sacs that cushion the bones, tendons and muscles near your joints.",,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00014424,Nanumanga District,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00014424,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Nanumanga District,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0826,Icelandic in Iceland (SGDP),Icelandic,A population made up of 2 samples from Icelandic individuals recruited in Iceland as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Icelandic,,,,HANCESTRO:0826,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Icelandic in Iceland (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Icelandic individuals recruited in Iceland as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0821,Finnish in Finland (SGDP),Finnish,A population made up of 3 samples from Finnish individuals recruited in Finland as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Finnish,,,,HANCESTRO:0821,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Finnish in Finland (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 3 samples from Finnish individuals recruited in Finland as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0824,Greek in Greece (SGDP),Greek,A population made up of 2 samples from Greek individuals recruited in Greece as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Greek,,,,HANCESTRO:0824,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Greek in Greece (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Greek individuals recruited in Greece as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0825,Hungarian in Hungary (SGDP),Hungarian,A population made up of 2 samples from Hungarian individuals recruited in Hungary as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Hungarian,,,,HANCESTRO:0825,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Hungarian in Hungary (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Hungarian individuals recruited in Hungary as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0828,Iraqi Jew in Iraq (SGDP),Iraqi Jew,A population made up of 2 samples from Iraqi Jew individuals recruited in Iraq as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Iraqi Jew,,,,HANCESTRO:0828,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Iraqi Jew in Iraq (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Iraqi Jew individuals recruited in Iraq as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0820,Estonian in Estonia (SGDP),Estonian,A population made up of 2 samples from Estonian individuals recruited in Estonia as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Estonian,,,,HANCESTRO:0820,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Estonian in Estonia (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Estonian individuals recruited in Estonia as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0822,French in France (SGDP),French,A population made up of 3 samples from French individuals recruited in France as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,French,,,,HANCESTRO:0822,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,French in France (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 3 samples from French individuals recruited in France as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0829,Jordanian in Jordan (SGDP),Jordanian,A population made up of 3 samples from Jordanian individuals recruited in Jordan as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Jordanian,,,,HANCESTRO:0829,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Jordanian in Jordan (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 3 samples from Jordanian individuals recruited in Jordan as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0827,Iranian in Iran (SGDP),Iranian,A population made up of 2 samples from Iranian individuals recruited in Iran as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Iranian,,,,HANCESTRO:0827,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Iranian in Iran (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Iranian individuals recruited in Iran as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0823,Georgian in Georgia (SGDP),Georgian,A population made up of 2 samples from Georgian individuals recruited in Georgia as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Georgian,,,,HANCESTRO:0823,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Georgian in Georgia (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Georgian individuals recruited in Georgia as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_33832,organic cyclic compound,,Any organic molecule that consists of atoms connected in the form of a ring.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:33832,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,organic cyclic compound,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any organic molecule that consists of atoms connected in the form of a ring.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0100851,Abnormal emotional state,Psychological distress|Mood disturbance|Emotional dysregulation,"A disturbance in the experience or expression of emotion, characterized by alterations in valence, intensity, frequency, or duration. It may also involve emotional responses that are mismatched, exaggerated, or incongruent relative to internal expectations or external contextual stimuli, such as experiencing negative affect in response to neutral or positive events.",FALSE,,,,,,,,,,,,,,"Emotions are complex psychological and physiological states that may include any combination of: a subjective internal experience, a physiological response, and a behavioral or expressive component. Behavioral expression is not required for the emotional state to be considered present or clinically relevant. The assessment of abnormal emotional states should consider sociocultural and individual context, as well as intra-individual baselines. The term 'abnormal' is used descriptively and non-pejoratively, to denote deviations from typical emotional patterns, which may or may not reach the threshold of clinical disorder.",,,,,,,,,,,,,,,,,,UMLS:C4020949,,,,,,,,,,,,,,,,,,,,,,,,Psychological distress|Mood disturbance|Emotional dysregulation,,,,,HP:0100851,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal emotional state,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A disturbance in the experience or expression of emotion, characterized by alterations in valence, intensity, frequency, or duration. It may also involve emotional responses that are mismatched, exaggerated, or incongruent relative to internal expectations or external contextual stimuli, such as experiencing negative affect in response to neutral or positive events.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0000945,stomach,stomach chamber,"An expanded region of the vertebrate alimentary tract that serves as a food storage compartment and digestive organ. A stomach is lined, in whole or in part by a glandular epithelium.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:Stomach|XAO:0000128|Wikipedia:Stomach|VHOG:0000408|UMLS:C0038351|TAO:0002121|SCTID:181246003|NCIT:C12391|MIAA:0000051|MESH:D013270|MAT:0000051|MA:0000353|GAID:293|FMA:7148|EV:0100070|EMAPA:17021|EHDAA:2993|EHDAA2:0001915|EFO:0000837|CALOHA:TS-0980|BTO:0001307|ANISEED:1235297|AAO:0000579,,,,,,,,,,,,,,,,,,,,,,,,,,stomach chamber,,,UBERON:0000945,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,stomach,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An expanded region of the vertebrate alimentary tract that serves as a food storage compartment and digestive organ. A stomach is lined, in whole or in part by a glandular epithelium.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0000948,heart,branchial heart,A myogenic muscular circulatory organ found in the vertebrate cardiovascular system composed of chambers of cardiac muscle. It is the primary circulatory organ.,FALSE,,,,,,,,,,,,,,"Taxon notes:"" the ascidian tube-like heart lacks chambers....The ascidian heart is formed after metamorphosis as a simple tube-like structure with a single-layered myoepithelium that is continuous with a single-layered pericar- dial wall. It lacks chambers and endocardium.... The innovation of the chambered heart was a key event in vertebrate evolution, because the chambered heart generates one-way blood flow with high pressure, a critical requirement for the efficient blood supply of large-body vertebrates... all extant vertebrates have hearts with two or more chambers (Moorman and Christoffels 2003)"" DOI:10.1101/gad.1485706",,,,,,,,,,,,,,,,,,galen:Heart|ZFA:0000114|XAO:0000064|Wikipedia:Heart|VHOG:0000276|UMLS:C0018787|TAO:0000114|SCTID:302509004|NCIT:C12727|MIAA:0000036|MESH:D006321|MAT:0000036|MA:0000072|GAID:174|FMA:7088|EV:0100018|EMAPA:16105|EHDAA:420|EHDAA2:0000738|EFO:0000815|CALOHA:TS-0445|BTO:0000562|BILA:0000020|AAO:0010210,,,,,,,,,,,,,,,,,,,,,,,,,vertebrate heart|chambered heart,branchial heart,,,UBERON:0000948,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,heart,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A myogenic muscular circulatory organ found in the vertebrate cardiovascular system composed of chambers of cardiac muscle. It is the primary circulatory organ.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_6909,metronidazole,,"A member of the class of imidazoles substituted at C-1, -2 and -5 with 2-hydroxyethyl, nitro and methyl groups respectively. It has activity against anaerobic bacteria and protozoa, and has a radiosensitising effect on hypoxic tumour cells. It may be given by mouth in tablets, or as the benzoate in an oral suspension. The hydrochloride salt can be used in intravenous infusions. Metronidazole is a prodrug and is selective for anaerobic bacteria due to their ability to intracellularly reduce the nitro group of metronidazole to give nitroso-containing intermediates. These can covalently bind to DNA, disrupting its helical structure, inducing DNA strand breaks and inhibiting bacterial nucleic acid synthesis, ultimately resulting in bacterial cell death.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:63636|CHEBI:39845,,,,,,CHEBI:6909,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,metronidazole,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A member of the class of imidazoles substituted at C-1, -2 and -5 with 2-hydroxyethyl, nitro and methyl groups respectively. It has activity against anaerobic bacteria and protozoa, and has a radiosensitising effect on hypoxic tumour cells. It may be given by mouth in tablets, or as the benzoate in an oral suspension. The hydrochloride salt can be used in intravenous infusions. Metronidazole is a prodrug and is selective for anaerobic bacteria due to their ability to intracellularly reduce the nitro group of metronidazole to give nitroso-containing intermediates. These can covalently bind to DNA, disrupting its helical structure, inducing DNA strand breaks and inhibiting bacterial nucleic acid synthesis, ultimately resulting in bacterial cell death.",,,,,,,,
http://purl.obolibrary.org/obo/HP_0002094,Dyspnea,Trouble breathing|Shortness of breath|Dyspnoea|Difficulty breathing|Difficult to breathe|Breathing difficulty|Abnormal breathing,"Difficult or labored breathing. Dyspnea is a subjective feeling only the patient can rate, e.g., on a Borg scale.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0013404|SNOMEDCT_US:267036007|SNOMEDCT_US:230145002,,,,,,,,,,,,,,,,,,,,,,,,,Trouble breathing|Shortness of breath|Dyspnoea|Difficulty breathing|Difficult to breathe|Breathing difficulty|Abnormal breathing,,,,HP:0002094,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Dyspnea,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Difficult or labored breathing. Dyspnea is a subjective feeling only the patient can rate, e.g., on a Borg scale.",,,,,,,,
http://purl.obolibrary.org/obo/HP_0002099,Asthma,Bronchial asthma|Asthma,"Asthma is characterized by increased responsiveness of the tracheobronchial tree to multiple stimuli, leading to narrowing of the air passages with resultant dyspnea, cough, and wheezing.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C3714497|UMLS:C0004096|SNOMEDCT_US:991000119106|SNOMEDCT_US:195967001,,,,,,,,,,,,,,,,,,,,,,,HP:0002112,,Bronchial asthma|Asthma,,,,HP:0002099,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Asthma,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Asthma is characterized by increased responsiveness of the tracheobronchial tree to multiple stimuli, leading to narrowing of the air passages with resultant dyspnea, cough, and wheezing.",,,,,,,,
http://purl.obolibrary.org/obo/HP_0002097,Emphysema,Pulmonary emphysema,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0034067|SNOMEDCT_US:87433001,,,,,,,,,,,,,,,,,,,,,,,HP:0006534,,Pulmonary emphysema,,,,HP:0002097,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Emphysema,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HP_0002093,Respiratory insufficiency,Respiratory impairment,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4020855|UMLS:C0035229|SNOMEDCT_US:409623005,,,,,,,,,,,,,,,,,,,,,,,HP:0006542|HP:0005937|HP:0004893,,Respiratory impairment,,,,HP:0002093,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Respiratory insufficiency,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HP_0002090,Pneumonia,Pneumonia,Inflammation of any part of the lung parenchyma.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0032285|SNOMEDCT_US:233604007,,,,,,,,,,,,,,,,,,,,,,,,,Pneumonia,,,,HP:0002090,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Pneumonia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Inflammation of any part of the lung parenchyma.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001896,phone type,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001896,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,phone type,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510236,traditional ingredient claim,,"Raw material (species and/or varieties) or primary product either alone or as an ingredient that has been used in identifiable geographical areas and remains in use today (taking into account cases where use was abandoned for a time and then reinstated) and its characteristics are in accordance with current specifications of national and EU legislation. [Traditional Foods in Europe, EuroFIR Synthesis report No 6, 2009]",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0236,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510236,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,traditional ingredient claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Raw material (species and/or varieties) or primary product either alone or as an ingredient that has been used in identifiable geographical areas and remains in use today (taking into account cases where use was abandoned for a time and then reinstated) and its characteristics are in accordance with current specifications of national and EU legislation. [Traditional Foods in Europe, EuroFIR Synthesis report No 6, 2009]",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100023,viral passage experiment strategy,,A research sampling strategy in which individuals are sampled in order to perform a viral passage experiment.,FALSE,,,,,,,Viral passage experiment,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100023,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,viral passage experiment strategy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A research sampling strategy in which individuals are sampled in order to perform a viral passage experiment.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000008,Minimum information about a marker gene sequence,,"The ""minimum information about a marker gene sequence"" (MIMARKS) is a standard developed by the Genomic Standards Consortium (GSC) for reporting marker gene sequences.",FALSE,,,,,,,,,,,,,,,,,,,,,http://www.nature.com/nbt/journal/v29/n5/full/nbt.1823.html,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000008,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Minimum information about a marker gene sequence,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The ""minimum information about a marker gene sequence"" (MIMARKS) is a standard developed by the Genomic Standards Consortium (GSC) for reporting marker gene sequences.",,,,MIMARKS standard,,,,
http://purl.obolibrary.org/obo/FOODON_03510215,food allergen labelling about crustaceans and products thereof,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0215,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510215,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food allergen labelling about crustaceans and products thereof,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000267,"lamb sirloin chop (boneless, raw)",,A raw and boneless lamb sirloin chop.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000267,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"lamb sirloin chop (boneless, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw and boneless lamb sirloin chop.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0070334,vegetable allergy,,A food allergy triggered by a vegetable food product.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0070334,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,vegetable allergy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A food allergy triggered by a vegetable food product.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0070335,celery allergy,,A vegetable allergy triggered by celery (Apium graveolens).,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0070335,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,celery allergy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A vegetable allergy triggered by celery (Apium graveolens).,,,,,,,,
http://purl.obolibrary.org/obo/DOID_10461,dentin caries,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:10461,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,dentin caries,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/APOLLO_SV_00000236,asymptomatic host,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,APOLLO_SV:00000236,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/apollo_sv.owl,,,,,,,,,asymptomatic host,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03317624,fish fillet (deep-frozen),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://bioregistry.io/reference/siren:F17624,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03317624,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,fish fillet (deep-frozen),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ARO_3004365,British Society for Antimicrobial Chemotherapy (BSAC),,"BSAC is a British inter-professional organisation involved in antibiotic education, research and leadership. Baquero F. found that the BSAC system recommends lower breakpoints than the consensus standard of all systems for antimicrobial susceptibility testing used in Europe (BSAC, DIN, SFM, SIR, NCCLS and WRG).",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,BSAC,,,,,,ARO:3004365,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/aro.owl,,,,,,,,,British Society for Antimicrobial Chemotherapy (BSAC),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"BSAC is a British inter-professional organisation involved in antibiotic education, research and leadership. Baquero F. found that the BSAC system recommends lower breakpoints than the consensus standard of all systems for antimicrobial susceptibility testing used in Europe (BSAC, DIN, SFM, SIR, NCCLS and WRG).",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490141,"paper bag, sack or pouch, paper liner",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0141,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490141,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"paper bag, sack or pouch, paper liner",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100418,concert event datum,,A recreational event where the primary emphasis is on a concert performance.,FALSE,,,,,,,Concert,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100418,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-01-23T00:42:19.315Z,,,,,,,,,,,,,,,,,,,concert event datum,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A recreational event where the primary emphasis is on a concert performance.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490139,"aluminum tube, unlined plastic top",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0139,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490139,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"aluminum tube, unlined plastic top",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100231,travelled on a plane exposure process,,A process occuring within or in the vicinity of an airplane that exposes the recipient organism to a material entity.,FALSE,,,,,,,Travelled on a Plane,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100231,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,travelled on a plane exposure process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A process occuring within or in the vicinity of an airplane that exposes the recipient organism to a material entity.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001032,obsolete: baby shower,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001032,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: baby shower,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/PCO_0000039,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000033,pond,pool (water body),"A body of water, usually of smaller size than a lake.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Pond|TGN:21119|TGN:21104|SWEETRealm:Pond|SPIRE:Lake_or_pond|LTER:975|Geonames:H.POOL|Geonames:H.PNDS|Geonames:H.PND|FTT:905|FTT:904|FTT:902|FTT:221|EcoLexicon:pond,,,,,,,,,,,,,,,,,,,,,,,,lake,Pond,pool (water body),,,ENVO:00000033,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,pond,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A body of water, usually of smaller size than a lake.",,,,,,,,
http://purl.obolibrary.org/obo/GSSO_000129,"genderqueer, gender nonconforming, and gender nonbinary","genderqueer, gender nonconforming and gender nonbinary|genderqueer, gender non-conforming, and gender nonbinary","An umbrella term often used in research to covered genderqueer and gender nonbinary identities, as well as gender nonconforming persons.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"genderqueer, gender nonconforming and gender nonbinary|genderqueer, gender non-conforming, and gender nonbinary",,,,GSSO:000129,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gsso.owl,,,,,,,,,"genderqueer, gender nonconforming, and gender nonbinary",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An umbrella term often used in research to covered genderqueer and gender nonbinary identities, as well as gender nonconforming persons.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_23007,carbohydrate-containing antibiotic,,Any carbohydrate derivative that exhibits antibiotic activity.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:23007,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,carbohydrate-containing antibiotic,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any carbohydrate derivative that exhibits antibiotic activity.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00003740,"populated place, Tanzania",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00003740,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Tanzania",http://purl.obolibrary.org/obo/GAZ_00001103,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00003742,"populated place, Tunisia",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00003742,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Tunisia",http://purl.obolibrary.org/obo/GAZ_00000562,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00003746,"populated place, Thailand",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00003746,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Thailand",http://purl.obolibrary.org/obo/GAZ_00003744,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_13034,relapsing fever,,"A primary bacterial infectious disease that results_in infection, has_material_basis_in Borrelia, which is transmitted_by tick or transmitted_by body louse.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:13034,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,relapsing fever,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A primary bacterial infectious disease that results_in infection, has_material_basis_in Borrelia, which is transmitted_by tick or transmitted_by body louse.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_13036,tick-borne relapsing fever,,"A relapsing fever that is characterized by relapsing or recurring episodes of fever, has_material_basis_in Borrelia hermsii, has_material_basis_in Borrelia parkeri or has_material_basis_in Borrelia duttoni, which are transmitted_by soft ticks (Ornithodoros parkeri and Ornithodoros hermsii). The infection has_symptom tachypnea, has_symptom tachycardia, has_symptom hepatosplenomegaly and has_symptom lymphadenopathy.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:13036,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,tick-borne relapsing fever,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A relapsing fever that is characterized by relapsing or recurring episodes of fever, has_material_basis_in Borrelia hermsii, has_material_basis_in Borrelia parkeri or has_material_basis_in Borrelia duttoni, which are transmitted_by soft ticks (Ornithodoros parkeri and Ornithodoros hermsii). The infection has_symptom tachypnea, has_symptom tachycardia, has_symptom hepatosplenomegaly and has_symptom lymphadenopathy.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_13035,louse-borne relapsing fever,,"A relapsing fever that is characterized by relapsing or recurring episodes of fever, has_material_basis_in Borrelia recurrentis, which is transmitted_by body louse (Pediculus humanus). The infection has_symptom tachypnea, has_symptom tachycardia, has_symptom hepatosplenomegaly and has_symptom lymphadenopathy.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:13035,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,louse-borne relapsing fever,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A relapsing fever that is characterized by relapsing or recurring episodes of fever, has_material_basis_in Borrelia recurrentis, which is transmitted_by body louse (Pediculus humanus). The infection has_symptom tachypnea, has_symptom tachycardia, has_symptom hepatosplenomegaly and has_symptom lymphadenopathy.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020469,piece of turkey meat (boneless),,A piece of boneless turkey meat.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020469,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of turkey meat (boneless),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A piece of boneless turkey meat.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0010538,paired limb/fin segment,limb/fin segment,An appendage segment that is part of a limb/fin.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,limb/fin segment,,,,UBERON:0010538,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,paired limb/fin segment,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An appendage segment that is part of a limb/fin.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102286,GeneMind GenoLab M,,A DNA sequencer manufactured by GeneMInd. Uses sequencing-by-synthesis.,FALSE,,,,,,,GenoLab M,,,,,,,,,,,,,,https://en.genemind.com/product/genolab-m,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102286,,,,,,,,,,,,,https://orcid.org/0000-0002-7654-6902|https://orcid.org/0000-0001-8008-8249,2026-03-30T14:26:04.627Z,,,,,,,,,,,,,,,,,,,GeneMind GenoLab M,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A DNA sequencer manufactured by GeneMInd. Uses sequencing-by-synthesis.,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0018076,tuberculosis,active tuberculosis,"A chronic, recurrent infection caused by the bacterium Mycobacterium tuberculosis. Tuberculosis (TB) may affect almost any tissue or organ of the body with the lungs being the most common site of infection. The clinical stages of TB are primary or initial infection, latent or dormant infection, and recrudescent or adult-type TB. Ninety to 95% of primary TB infections may go unrecognized. Histopathologically, tissue lesions consist of granulomas which usually undergo central caseation necrosis. Local symptoms of TB vary according to the part affected; acute symptoms include hectic fever, sweats, and emaciation; serious complications include granulomatous erosion of pulmonary bronchi associated with hemoptysis. If untreated, progressive TB may be associated with a high degree of mortality. This infection is frequently observed in immunocompromised individuals with AIDS or a history of illicit IV drug use.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,icd11.foundation:2072728114|UMLS:C0041296|SCTID:56717001|Orphanet:3389|NORD:1801|NCIT:C3423|MedDRA:10044755|MESH:D014376|MEDGEN:22513|ICD9:017.96|ICD9:017.94|ICD9:017.92|ICD9:017.90|ICD10WHO:A15-A19|ICD10CM:A15-A19|GARD:0007827|DOID:399,,,,,,,,,,,,,,,,,,,,,,,,,tuberculosis disease,active tuberculosis,,,MONDO:0018076,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#rare|http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar|http://purl.oboInOwllibrary.org/oboInOwl/mondo#ordo_group_of_disorders|http://purl.oboInOwllibrary.org/oboInOwl/mondo#nord_rare|http://purl.oboInOwllibrary.org/oboInOwl/mondo#gard_rare|http://purl.oboInOwllibrary.org/oboInOwl/mondo#doid_rare,,,,,,,,tuberculosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A chronic, recurrent infection caused by the bacterium Mycobacterium tuberculosis. Tuberculosis (TB) may affect almost any tissue or organ of the body with the lungs being the most common site of infection. The clinical stages of TB are primary or initial infection, latent or dormant infection, and recrudescent or adult-type TB. Ninety to 95% of primary TB infections may go unrecognized. Histopathologically, tissue lesions consist of granulomas which usually undergo central caseation necrosis. Local symptoms of TB vary according to the part affected; acute symptoms include hectic fever, sweats, and emaciation; serious complications include granulomatous erosion of pulmonary bronchi associated with hemoptysis. If untreated, progressive TB may be associated with a high degree of mortality. This infection is frequently observed in immunocompromised individuals with AIDS or a history of illicit IV drug use.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490217,three-part can,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0217,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490217,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,three-part can,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000360,veal breast (boneless),,A boneless veal breast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000360,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,veal breast (boneless),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A boneless veal breast.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C15655,Thoracic Surgical Procedure,Thoracic Surgical Procedures|Thoracic Surgical Procedure|Thoracic Surgery|Chest Surgery,Any surgery performed inside the thoracic cavity.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Thoracic Surgical Procedures|Thoracic Surgical Procedure|Thoracic Surgery|Chest Surgery,,,,NCIT:C15655,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Thoracic Surgical Procedure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any surgery performed inside the thoracic cavity.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001492,outbreak history item,,"An outbreak date may have an official start, but because it might be ongoing, it may not have an end (yet).",FALSE,,,,,,,,,,,,,,"An outbreak date may have an official start, but because it might be ongoing, it may not have an end (yet).",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001492,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,outbreak history item,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03460141,food modification process,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=H0141,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03460141,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food modification process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020436,turkey organ,,An organ that derives from a turkey.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020436,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,turkey organ,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An organ that derives from a turkey.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02021759,pork roast (raw),,A raw pork roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02021759,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pork roast (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw pork roast.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100801,total solids (TS) measurement unit,total solids (TS) measurement unit,An environmental data field which describes the units associated with a value from a total solids (TS) test.,FALSE,,,,,,,PCDS:total_solids_ts_measurement_unit,,,,,,,PCDS: Provide the units of the measured TS.,,,,,,,,,,,,,,PCDS: percent (%),,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,total solids (TS) measurement unit,total solids (TS) measurement unit slot,,,,GENEPIO:0100801,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,total solids (TS) measurement unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the units associated with a value from a total solids (TS) test.,,PCDS: The units associated with a value from a total solids (TS) test.,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510047,salt or sodium special claim,,"All narrower term definitions extracted from 58 Federal Register 2032, January 6, 1993, part 101.61.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0047,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510047,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,salt or sodium special claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"All narrower term definitions extracted from 58 Federal Register 2032, January 6, 1993, part 101.61.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03430140,"whole, shape achieved by forming, thickness 0.3-1.5 cm.",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=E0140,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03430140,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"whole, shape achieved by forming, thickness 0.3-1.5 cm.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490117,"paper bag, sack or pouch, plastic liner",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0117,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490117,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"paper bag, sack or pouch, plastic liner",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/IAO_0000140,setting datum,,A settings datum is a datum that denotes some configuration of an instrument.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Alan grouped these in placeholder for the moment. Name by analogy to measurement datum.|2/3/2009 Feedback from OBI

This should be a ""setting specification"". There is a question of whether it is information about a realizable or not.

Pro other specification are about realizables.
Cons sometimes specifies a quality which is not a realizable.",,,,,,http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,IAO:0000140,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/obib.owl|http://purl.obolibrary.org/obo/iao.owl,,,,,,,,,setting datum,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A settings datum is a datum that denotes some configuration of an instrument.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490358,thermoplastic sheet or container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0358,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490358,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,thermoplastic sheet or container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02021802,animal fillet (skinless),,An animal fillet that is skinless.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02021802,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,animal fillet (skinless),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An animal fillet that is skinless.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_60584,bicozamycin,,A commercially important azabicyclic antibiotic obtained from <em>Streptomyces sapporonensis</em>. It inhibits the Rho protein of <em>E. coli</em>.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:3091,,,,,,CHEBI:60584,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,bicozamycin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A commercially important azabicyclic antibiotic obtained from <em>Streptomyces sapporonensis</em>. It inhibits the Rho protein of <em>E. coli</em>.,,,,,,,,
http://purl.obolibrary.org/obo/IDO_0000509,organism population,,An aggregate of organisms of the same Species.,FALSE,,,,,,,,,,,,,,The organism population may be delineated by spatio-temporal proximity or by demographic criteria such as age.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,IDO:0000509,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ido.owl,,,,,,,,,organism population,,,,,,,,,,,,,,,,,,,,,,,,,,,,Lindsay Cowell|Alexander Diehl|Albert Goldfain,,,,An aggregate of organisms of the same Species.,,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000674,frequency,,A ratio in which the numerator represents a count and the denominator represents a count (without involving an interval of time).,FALSE,,,,,,,,,,,,,,,,,,,,,SEVCO group,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000674,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,frequency,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Brian S. Alper, Joanne Dehnbostel, Muhammad Afzal, Kenneth Wilkins, Harold Lehmann",,,,A ratio in which the numerator represents a count and the denominator represents a count (without involving an interval of time).,,,,,,,,
http://purl.obolibrary.org/obo/HP_0011277,Abnormality of the urinary system physiology,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4023437,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0011277,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormality of the urinary system physiology,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0406,Dominican,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0406,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Dominican,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0401,British Virgin Islander,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0401,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,British Virgin Islander,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0402,Caymanian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0402,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Caymanian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0400,Bolivian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0400,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Bolivian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0403,Colombian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0403,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Colombian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0407,Ecuadorian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0407,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Ecuadorian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0408,Salvadoran,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0408,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Salvadoran,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0405,Cuban,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0405,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Cuban,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0404,Costa Rican,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0404,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Costa Rican,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0409,French Guianese,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0409,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,French Guianese,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00001145,microbial food material,,"Microbial material derived from one or more microorganisms including bacteria, mold, and yeast.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00001145,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,microbial food material,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Microbial material derived from one or more microorganisms including bacteria, mold, and yeast.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000308,"New York chop (boneless, raw)",,A raw and boneless New York chop.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000308,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"New York chop (boneless, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw and boneless New York chop.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00004332,piece of animal,,A severed part of an animal.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00004332,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of animal,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A severed part of an animal.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_59064,colistin A,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:59064,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,colistin A,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/BTO_0001913,colonic adenocarcinoma cell line,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,BTO:0001913,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/bto.owl,,,,,,,,,colonic adenocarcinoma cell line,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_74159,D-cycloserine zwitterion,,A zwitterion resulting from the transfer of a proton from the ring nitrogen to the primary amino group of <small>D</small>-cycloserine. The major species at pH 7.3.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:74159,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,D-cycloserine zwitterion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A zwitterion resulting from the transfer of a proton from the ring nitrogen to the primary amino group of <small>D</small>-cycloserine. The major species at pH 7.3.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490368,high density polyethylene container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0368,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490368,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,high density polyethylene container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0004119,endoderm-derived structure,,An anatomical structure that develops (entirely or partially) from the endoderm.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0004119,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,endoderm-derived structure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An anatomical structure that develops (entirely or partially) from the endoderm.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0004111,anatomical conduit,foramina|foramen,"Any tube, opening or passage that connects two distinct anatomical spaces.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Foramen|SCTID:346902003|FMA:242873|EHDAA2:0003080|AEO:0000080,,,,,,,,,,,,,,,,,,,,,,,,,,foramina|foramen,,,UBERON:0004111,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,anatomical conduit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Any tube, opening or passage that connects two distinct anatomical spaces.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_10027,tabes dorsalis,,"A tertiary neurosyphilis that results in slow degeneration of the nerve cells and nerve fibers that carry sensory information to the brain. The infection has symptom intense, stabbing pain in the back and legs that recurs irregularly, has symptom gait ataxia, has symptom hyperesthesia, has symptom paresthesia, has symptom loss of bladder sensation leading to urine retention, has symptom erectile dysfunction.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:10027,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,tabes dorsalis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A tertiary neurosyphilis that results in slow degeneration of the nerve cells and nerve fibers that carry sensory information to the brain. The infection has symptom intense, stabbing pain in the back and legs that recurs irregularly, has symptom gait ataxia, has symptom hyperesthesia, has symptom paresthesia, has symptom loss of bladder sensation leading to urine retention, has symptom erectile dysfunction.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510105,unsweetened claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0105,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510105,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,unsweetened claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001220,spa water,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001220,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,spa water,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001271,animal exposure event by material,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001271,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,animal exposure event by material,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00002006,liquid water,water,An environmental material primarily composed of dihydrogen oxide in its liquid form.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Water|LTER:617|EcoLexicon:water,,,,,,,,,,,,,,,,,,,,,,,,water,,,,,ENVO:00002006,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,liquid water,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental material primarily composed of dihydrogen oxide in its liquid form.,,,,,,,,
http://purl.obolibrary.org/obo/COB_0000080,complex of molecules,,A complex of two or more molecules that are not covalently bound.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,COB:0000080,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/cob.owl,,,,,,,,,complex of molecules,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A complex of two or more molecules that are not covalently bound.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000208,beef ribeye roast (raw),,A raw beef ribeye roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000208,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef ribeye roast (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef ribeye roast.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000278,lamb loin (raw),,A raw lamb loin cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000278,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lamb loin (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw lamb loin cut.,,,,,,,,
http://purl.obolibrary.org/obo/BTO_0000195,CACO-2 cell,,"Human colon adenocarcinoma cell line, established from the primary colon tumor (adenocarcinoma) of a 72-year-old Caucasian man in 1974.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,BTO:0000195,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/bto.owl,,,,,,,,,CACO-2 cell,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Human colon adenocarcinoma cell line, established from the primary colon tumor (adenocarcinoma) of a 72-year-old Caucasian man in 1974.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000161,genome sequencing project,,"A whole, or partial, genome sequencing project (with or without a genome assembly)",FALSE,,,,,,,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/books/NBK54364/,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000161,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,genome sequencing project,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"A whole, or partial, genome sequencing project (with or without a genome assembly)",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510174,gluten free claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0174,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510174,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,gluten free claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_17632,nitrate,,A nitrogen oxoanion formed by loss of a proton from nitric acid. Principal species present at pH 7.3.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:71263|CHEBI:44487|CHEBI:14654,,,,,,CHEBI:17632,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,nitrate,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A nitrogen oxoanion formed by loss of a proton from nitric acid. Principal species present at pH 7.3.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001889,Canada postal code FSA,,"The ""Canadia postal code FSA"" is the leading FSA (Forward Sortation Area) 3 character portion of a full 6 character Canadian postal code.  It can be used to reduce the geographic granularity of a postal code for data generalization or obfuscation.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001889,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Canada postal code FSA,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"The ""Canadia postal code FSA"" is the leading FSA (Forward Sortation Area) 3 character portion of a full 6 character Canadian postal code.  It can be used to reduce the geographic granularity of a postal code for data generalization or obfuscation.",,,,,,,"/^((:<FSA>[ABCEGHJKLMNPRSTVXY][0-9][ABCEGHJKLMNPRSTVWXYZ]))$/i, $FSA",
http://purl.obolibrary.org/obo/FOODON_00001038,pork meat food product,,A food product made from domestic pig meat (Sus domesticus or Sus scrofa scrofa).,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00001038,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pork meat food product,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A food product made from domestic pig meat (Sus domesticus or Sus scrofa scrofa).,,,,,,,,
http://purl.obolibrary.org/obo/OMIT_0006039,Enzymes,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OMIT:0006039,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/omit.owl,,,,,,,,,Enzymes,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510017,fat special claim,,"All narrower term definitions extracted from 58 Federal Register 2302, January 6, 1993, part 101.62(b).",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0017,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510017,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,fat special claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"All narrower term definitions extracted from 58 Federal Register 2302, January 6, 1993, part 101.62(b).",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000268,leg of lamb,,"A whole rear leg containing the eye, bottom, sirloin, sirloin tip and top.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000268,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,leg of lamb,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A whole rear leg containing the eye, bottom, sirloin, sirloin tip and top.",,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000002,anthropogenic geographic feature,,An anthropogenic geographic feature is a geographic feature resulting from the influence of human beings on nature.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,TGN:50001|FTT:78,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00000002,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,anthropogenic geographic feature,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An anthropogenic geographic feature is a geographic feature resulting from the influence of human beings on nature.,,,,constructed feature,,,,
http://purl.obolibrary.org/obo/CHEBI_102265,sulfamethazine,,A sulfonamide consisting of pyrimidine with methyl substituents at the 4- and 6-positions and a 4-aminobenzenesulfonamido group at the 2-position.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:102265,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,sulfamethazine,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A sulfonamide consisting of pyrimidine with methyl substituents at the 4- and 6-positions and a 4-aminobenzenesulfonamido group at the 2-position.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0001977,Abnormal thrombosis,Abnormal blood clotting|Abnormal blood clot,Venous or arterial thrombosis (formation of blood clots) of spontaneous nature and which cannot be fully explained by acquired risk (e.g. atherosclerosis).,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4025731,,,,,,,,,,,,,,,,,,,,,,,,,Abnormal blood clotting|Abnormal blood clot,,,,HP:0001977,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal thrombosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Venous or arterial thrombosis (formation of blood clots) of spontaneous nature and which cannot be fully explained by acquired risk (e.g. atherosclerosis).,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000580,Karonica,,A Jola population with a population size of 117000,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000580,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Karonica,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Jola population with a population size of 117000,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000875,precipitation process,,A precipitation process is a process in which a portion of some substance segregates from a material in which that substance or its precursors were dissolved or suspended in and settles due to a force such as gravity or centrifugal force.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01000875,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,precipitation process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A precipitation process is a process in which a portion of some substance segregates from a material in which that substance or its precursors were dissolved or suspended in and settles due to a force such as gravity or centrifugal force.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490337,grease proof paper container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0337,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490337,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,grease proof paper container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000263,lamb leg top,,"A boneless cut that comes from the inside portion of any boneless leg cut and shall consist of the semimembranosus, adductor and firmly attached muscles. The inside is separated from the bottom and knuckle portion along the natural seams.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000263,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lamb leg top,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A boneless cut that comes from the inside portion of any boneless leg cut and shall consist of the semimembranosus, adductor and firmly attached muscles. The inside is separated from the bottom and knuckle portion along the natural seams.",,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00004682,"populated place, Slovenia",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00004682,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Slovenia",http://purl.obolibrary.org/obo/GAZ_00002955,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/SYMP_0000009,blister,,A skin and integumentary tissue symptom that is characterized by a fluid-filled elevation of the epidermis.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SYMP:0000009,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/symp.owl,,,,,,,,,blister,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A skin and integumentary tissue symptom that is characterized by a fluid-filled elevation of the epidermis.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00005343,Province (Republic of China),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00005343,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Province (Republic of China),http://purl.obolibrary.org/obo/GAZ_00005341,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_25585,nonmetal atom,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:25585,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,nonmetal atom,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100431,sample plan id,sample_plan_ID|sample plan identifier|sample plan ID,An identifier field which describes the identifier of the study design for a surveillance project.,FALSE,,,,,,,PCDS:sample_plan_id,,,,,,,"PCDS: Provide the identifier of the sample plan used for sample collection. If the information is unknown or cannot be provided, leave blank or provide a null value.",,,,,,,,,,,,,,PCDS: 2001_M205,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,sample_plan_ID|sample plan identifier|sample plan ID,sample plan identifier slot|sample plan identifier field|sample plan ID slot,,,,GENEPIO:0100431,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,sample plan id,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An identifier field which describes the identifier of the study design for a surveillance project.,,PCDS: The identifier of the study design for a surveillance project.,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000016,sea,open water|open sound|open sea|marginal sea|closed sea|channel,A large expanse of saline water usually connected with an ocean.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Sea|TGN:21103|Geonames:H.SEA|FTT:830|FTT:233|EcoLexicon:sea,,,,,,,,,,,,,,,,,,,,,,,,,,open water|open sound|open sea|marginal sea|closed sea|channel,,,ENVO:00000016,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,envoPolar|envoMarine,,,,,,,,sea,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A large expanse of saline water usually connected with an ocean.,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_9694,Panthera tigris,,,FALSE,,,,,,,tiger,,,,,,,,,,,,,,,,,,,Panthera tigris,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:9694,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Panthera tigris,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0023370,neoplastic disease or syndrome,,Either an isolated neoplasm or a syndrome with neoplasm as a major feature.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MONDO:0023370,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,neoplastic disease or syndrome,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Either an isolated neoplasm or a syndrome with neoplasm as a major feature.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0101026,sediment depth units,sediment depth units,An environmental field which describes the units of measurement for sediment depth.,FALSE,,,,,,,PCDS:sediment_depth_units,,,,,,,PCDS: Provide the units of measurement for which the depth was recorded.,,,,,,,,,,,,,,PCDS: meter (m) [UO:0000008],,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,sediment depth units,sediment depth units slot,,,,GENEPIO:0101026,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,sediment depth units,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental field which describes the units of measurement for sediment depth.,,PCDS: The units of measurement for sediment depth.,,,,,,
http://purl.obolibrary.org/obo/FOODON_03430107,divided into segments or wedges,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=E0107,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03430107,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,divided into segments or wedges,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00003269,"populated place, Slovakia",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00003269,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Slovakia",http://purl.obolibrary.org/obo/GAZ_00002956,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100799,total dissolved solids tds measurement method,total dissolved solids (TDS) measurement method,An environmental data field which describes the method used to measure total dissolved solids (TDS).,FALSE,,,,,,,PCDS:total_dissolved_solids_tds_measurement_method,,,,,,,PCDS: Provide the name of the procedure or technology used to measure TDS.,,,,,,,,,,,,,,PCDS: Subtract calculated TSS from calculated TS,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,total dissolved solids (TDS) measurement method,total dissolved solids (TDS) measurement method slot,,,,GENEPIO:0100799,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,total dissolved solids tds measurement method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the method used to measure total dissolved solids (TDS).,,PCDS: The method used to measure total dissolved solids (TDS).,,,,,,
http://purl.obolibrary.org/obo/HP_0033677,Acute respiratory distress syndrome,ARDS,Acute respiratory distress syndrome (ARDS) is defined as an acute disorder that starts within seven days of the inciting event and is characterized by bilateral lung infiltrates and severe progressive hypoxemia in the absence of any evidence of cardiogenic pulmonary edema. ARDS is defined by the patient's oxygen in arterial blood (PaO2) to the fraction of the oxygen in the inspired air (FiO2). These patients have a PaO2/FiO2 ratio of less than 300.,FALSE,,,,,,,,,,,,,,"Acute respiratory distress syndrome (ARDS) is a life-threatening condition of seriously ill patients, characterized by poor oxygenation, pulmonary infiltrates, and acuity of onset. On a microscopic level, the disorder is associated with capillary endothelial injury and diffuse alveolar damage. Once ARDS develops, patients usually have varying degrees of pulmonary artery vasoconstriction and may subsequently develop pulmonary hypertension. ARDS carries a high mortality, and few effective therapeutic modalities exist to combat this condition. ARDS can be observed as a complication of many diseases including pulmonary infection or aspiration, sepsis, trauma, massive transfusion, drowning, drug overdose, fat embolism, inhalation of toxic fumes, and pancreatitis.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ARDS,,,,HP:0033677,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Acute respiratory distress syndrome,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Acute respiratory distress syndrome (ARDS) is defined as an acute disorder that starts within seven days of the inciting event and is characterized by bilateral lung infiltrates and severe progressive hypoxemia in the absence of any evidence of cardiogenic pulmonary edema. ARDS is defined by the patient's oxygen in arterial blood (PaO2) to the fraction of the oxygen in the inspired air (FiO2). These patients have a PaO2/FiO2 ratio of less than 300.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000625,manufactured cage,cage,"A manufactured structure made of interspaced structural elements such as metal or wooden bars or wires held together such that they may be used to confine, contain, or protect something.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,cage,,,,,ENVO:01000625,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,manufactured cage,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A manufactured structure made of interspaced structural elements such as metal or wooden bars or wires held together such that they may be used to confine, contain, or protect something.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00001286,turkey meat food product,,A turkey meat food product is any food product made predominantly of turkey parts.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00001286,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,turkey meat food product,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A turkey meat food product is any food product made predominantly of turkey parts.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0302885,filtration,,filtration is a process which separates components suspended in a fluid based on granularity properties relying on a filter device,FALSE,,,,,,,,,,,,,,,,,,,,,OBI-Branch: adapted from wikipedia and wordnet,,,,,filtration,,PMID: 18524968.Filtration of CSF improves isolation of Mycobacteria.J Clin Microbiol. 2008 Jun 4.,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0302885,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,filtration,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra,,,,filtration is a process which separates components suspended in a fluid based on granularity properties relying on a filter device,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0002795,disposable patient gown,,A patient gown intended for a single period of continuous use and then disposed of.,FALSE,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Patient_gown,,,,,disposable patient gown,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0002795,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,disposable patient gown,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://orcid.org/0000-0002-8844-9165,,,https://github.com/obi-ontology/obi/issues/1193,A patient gown intended for a single period of continuous use and then disposed of.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000117,specimen collection location - city or region,,A datum containing the city or region or more precise geographical location identifier for the site of a specimen collection event.,FALSE,,,,,,,,,,,,,,,,,,,,,Adapted from NIAID GSCID-BRC metadata working group,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000117,,,,Note that this is expressed in a particular format in some standards.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,specimen collection location - city or region,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A datum containing the city or region or more precise geographical location identifier for the site of a specimen collection event.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020205,piece of chicken meat,,A piece of meat that is derived from a chicken.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020205,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of chicken meat,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A piece of meat that is derived from a chicken.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0031704,Abnormal ear physiology,,Any functional anomaly of the ear.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0031704,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal ear physiology,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any functional anomaly of the ear.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_36094,organic chloride salt,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:36094,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,organic chloride salt,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_6195,conjunctivitis,,"A conjunctival disease characterized by an inflammation of the conjunctiva, the outermost layer of the eye and the inner surface of the eyelids.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:6195,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,conjunctivitis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A conjunctival disease characterized by an inflammation of the conjunctiva, the outermost layer of the eye and the inner surface of the eyelids.",,,,,,,,
http://purl.obolibrary.org/obo/HP_0001376,Limitation of joint mobility,Limited joint motion|Limited joint mobility|Limitation of joint mobility|Decreased mobility of joints|Decreased joint mobility,A reduction in the freedom of movement of one or more joints.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C1857108,,,,,,,,,,,,,,,,,,,,,,,HP:0003101,,Limited joint motion|Limited joint mobility|Limitation of joint mobility|Decreased mobility of joints|Decreased joint mobility,,,,HP:0001376,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Limitation of joint mobility,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A reduction in the freedom of movement of one or more joints.,,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000142,correlation coefficient,,The correlation coefficient of two variables in a data sample is their covariance divided by the product of their individual standard deviations. It is a normalized measurement of how the two are linearly related.,FALSE,,,,,,,,,,,,,,,,,,,,,STATO,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000142,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,correlation coefficient,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra|Alejandra Gonzalez-Beltran|Orlaith Burke,,,,The correlation coefficient of two variables in a data sample is their covariance divided by the product of their individual standard deviations. It is a normalized measurement of how the two are linearly related.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470180,ultra high temperature (UHT) pasteurization,,"Typically involves heating milk or cream to 135° to 150° C (275° to 302° F) for 1 or 2 seconds. The milk is then packaged in sterile, hermetically-sealed (airtight) containers (aspetic filling) and can be stored without refrigeration for up to 90 days. After opening, spoilage times for UHT products are similar to those of conventionally pasteurized products.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0180,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470180,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,ultra high temperature (UHT) pasteurization,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Typically involves heating milk or cream to 135° to 150° C (275° to 302° F) for 1 or 2 seconds. The milk is then packaged in sterile, hermetically-sealed (airtight) containers (aspetic filling) and can be stored without refrigeration for up to 90 days. After opening, spoilage times for UHT products are similar to those of conventionally pasteurized products.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530023,rib (meat cut),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0023,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530023,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,rib (meat cut),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_8283,peritonitis,,"A gastrointestinal system disease that involves inflammation of the peritoneum resulting from perforation of the gastrointestinal tract, which produces immediate chemical inflammation followed shortly by infection from intestinal organisms. Peritonitis can also result from appendicitis, diverticulitis, strangulating intestinal obstruction, pancreatitis, pelvic inflammatory disease, mesenteric ischemia, intraperitoneal blood, barium, or peritoneo-systemic shunts, drains, and dialysis catheters in the peritoneal cavity. The symptoms include abdominal pain and tenderness, fever, fluid in the abdomen, nausea, vomiting and low urine output.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:8283,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,peritonitis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A gastrointestinal system disease that involves inflammation of the peritoneum resulting from perforation of the gastrointestinal tract, which produces immediate chemical inflammation followed shortly by infection from intestinal organisms. Peritonitis can also result from appendicitis, diverticulitis, strangulating intestinal obstruction, pancreatitis, pelvic inflammatory disease, mesenteric ischemia, intraperitoneal blood, barium, or peritoneo-systemic shunts, drains, and dialysis catheters in the peritoneal cavity. The symptoms include abdominal pain and tenderness, fever, fluid in the abdomen, nausea, vomiting and low urine output.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02010318,animal chop (raw),,A raw animal chop.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02010318,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,animal chop (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw animal chop.,,,,,,,,
http://www.ebi.ac.uk/efo/EFO_0008336,disease progression measurement,,"quantification of some aspect of disease progression such as speed or symptom variability. Disease progression can be quantified in a number of ways, for example as a correlated measure of progression scores from different symptom areas",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PMID:28642124,,,,,,,,,,,,,,,,,,,,,,,,,,,,,efo:EFO_0008336,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,disease progression measurement,,,,,,,,,,,,,,,,,,,,,,,,,,,,Dani Welter,,,,"quantification of some aspect of disease progression such as speed or symptom variability. Disease progression can be quantified in a number of ways, for example as a correlated measure of progression scores from different symptom areas",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100977,AB 3130xL Genetic Analyzer,,An Applied Biosystems sequencing instrument model which performs capillary electrophoresis to sequence DNA and has 16 capillaries.,FALSE,,,,,,,AB 3130xL sequencer,,,,,,,The 3130 series is the successor to the AB PRISM 310.,,,,,,,https://assets.thermofisher.com/TFS-Assets/LSG/manuals/cms_041990.pdf,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100977,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2023-11-28T18:23:15.862Z,,,,,,,,,,,,,,,,,,,AB 3130xL Genetic Analyzer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An Applied Biosystems sequencing instrument model which performs capillary electrophoresis to sequence DNA and has 16 capillaries.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C26548,Gene Product,Genome Encoded Entity|Gene Product,"A protein, RNA or a complex that contains proteins and/or RNA.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Genome Encoded Entity|Gene Product,,,,NCIT:C26548,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Gene Product,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A protein, RNA or a complex that contains proteins and/or RNA.",,,,,,,,
http://purl.obolibrary.org/obo/BTO_0002909,RK-13 cell,,Rabbit renal epithelium cell line.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,BTO:0002909,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/bto.owl,,,,,,,,,RK-13 cell,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Rabbit renal epithelium cell line.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0005264,Abnormality of the gallbladder,Anomaly of the gallbladder|Abnormality of the gallbladder,An abnormality of the gallbladder.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0266249|SNOMEDCT_US:49714001|SNOMEDCT_US:253803008,,,,,,,,,,,,,,,,,,,,,,,,,Anomaly of the gallbladder|Abnormality of the gallbladder,,,,HP:0005264,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormality of the gallbladder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An abnormality of the gallbladder.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0005268,Miscarriage,Spontaneous abortion|Early foetal demise|Early fetal demise,"A pregnancy that ends at a stage in which the fetus is incapable of surviving on its own, defined as the spontaneous loss of a fetus before the 22th week of pregnancy.",FALSE,,,,,,,,,,,,,,The age at which fetal demise is legally classified asa a miscarriage varies between countries with the US being 20 gestational weeks and the UK being 24 gestational weeks. The HPO chooses the average of these age ranges.,,,,,,,,,,,,,,,,,,UMLS:C0000786|SNOMEDCT_US:17369002,,,,,,,,,,,,,,,,,,,,,,,,,Spontaneous abortion|Early foetal demise|Early fetal demise,,,,HP:0005268,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl|http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Miscarriage,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A pregnancy that ends at a stage in which the fetus is incapable of surviving on its own, defined as the spontaneous loss of a fetus before the 22th week of pregnancy.",,,,,,,,
http://purl.obolibrary.org/obo/MONDO_7770006,disease by body system or component,,A grouping class for human diseases classified by the body system or anatomical component primarily affected.,FALSE,,,,,,,,,,,,,,This term is intended solely for classification purposes and should not be used for direct data annotation.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MONDO:7770006,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,,,,,,,,,disease by body system or component,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A grouping class for human diseases classified by the body system or anatomical component primarily affected.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490170,"aluminum tube, top lined with foil",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0170,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490170,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"aluminum tube, top lined with foil",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001177,sample collection date precision,sample collection date precision,"A data field which describes the precision to which the ""sample collection date"" was provided.",FALSE,,,,,,,PCDS:sample_collection_date_precision,,,,,,,"PCDS: Provide the precision of granularity to the 'day', 'month', or 'year' for the date provided in the 'sample collection date' field. The 'sample collection date' will be truncated to the precision specified upon export: 'day' for 'YYYY-MM-DD', 'month' for 'YYYY-MM', or 'year' for 'YYYY'.",,,,,,,,,,,,,,PCDS: year,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,sample collection date precision,sample collection date precision slot,,,,GENEPIO:0001177,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,sample collection date precision,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A data field which describes the precision to which the ""sample collection date"" was provided.",,"PCDS: The precision to which the ""sample collection date"" was provided.",,,,,,
http://purl.obolibrary.org/obo/DOID_11976,botulism,,"A primary bacterial infectious disease that involves intoxication caused by botulinum neurotoxins (BoNTA, B, E and F) located in neuromuscular junction resulting in descending muscle paralysis, has_material_basis_in Clostridium botulinum A, has_material_basis_in Clostridium botulinum B, has_material_basis_in Clostridium botulinum E and has_material_basis_in Clostridium botulinum F.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:11976,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,botulism,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A primary bacterial infectious disease that involves intoxication caused by botulinum neurotoxins (BoNTA, B, E and F) located in neuromuscular junction resulting in descending muscle paralysis, has_material_basis_in Clostridium botulinum A, has_material_basis_in Clostridium botulinum B, has_material_basis_in Clostridium botulinum E and has_material_basis_in Clostridium botulinum F.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000077,beef ranch steak,,A steak cut across the grain from the shoulder clod arm roast similar to the shoulder steak. Visible connective tissue and associated lean must be removed to qualify as a Ranch Steak.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000077,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef ranch steak,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A steak cut across the grain from the shoulder clod arm roast similar to the shoulder steak. Visible connective tissue and associated lean must be removed to qualify as a Ranch Steak.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0000165,mouth,adult mouth,"The proximal portion of the digestive tract, containing the oral cavity and bounded by the oral opening. In vertebrates, this extends to the pharynx and includes gums, lips, tongue and parts of the palate. Typically also includes the teeth, except where these occur elsewhere (e.g. pharyngeal jaws) or protrude from the mouth (tusks).",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.oboInOwllibrary.org/oboInOwl/uberon/images/lamprey_sucker_rosava_3238889218.jpg|galen:Mouth|ZFA:0000590|ZFA:0000547|XAO:0003029|Wikipedia:Mouth|VHOG:0000812|VHOG:0000280|TGMA:0000131|TAO:0000590|TAO:0000547|TADS:0000040|SCTID:21082005|MIAA:0000038|MESH:D009055|MAT:0000038|MA:0002474|MA:0000341|GAID:75|FMA:49184|FBbt:00003126|EMAPA:16262|EHDAA:542|EHDAA2:0001326|EFO:0000825|CALOHA:TS-1315|BTO:0004698|BTO:0001090|AAO:0010355,,,,,,,,,,,,,,,,,,,,,,,,,regio oralis,adult mouth,,,UBERON:0000165,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,mouth,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The proximal portion of the digestive tract, containing the oral cavity and bounded by the oral opening. In vertebrates, this extends to the pharynx and includes gums, lips, tongue and parts of the palate. Typically also includes the teeth, except where these occur elsewhere (e.g. pharyngeal jaws) or protrude from the mouth (tusks).",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0000161,orifice,hilum,"Anatomical conduit that connects two adjacent body spaces (or a body space with the space surrounding the organism)[FMA,modified].",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SCTID:91837002|FMA:3724,,,,,,,,,,,,,,,,,,,,,,,,ostium|anatomical ostium,anatomical orifice,hilum,,,UBERON:0000161,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,orifice,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Anatomical conduit that connects two adjacent body spaces (or a body space with the space surrounding the organism)[FMA,modified].",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0000160,intestine,bowel,"Segment of the alimentary canal extending from the stomach to the anus and, in humans and other mammals, consists of two segments, the small intestine and the large intestine.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:Intestine|ZFA:0001338|XAO:0000129|Wikipedia:Intestine|WBbt:0005772|VHOG:0000056|UMLS:C0021853|TAO:0001338|SCTID:256876008|NCIT:C12736|MIAA:0000043|MESH:D007422|MA:0001524|MA:0000328|GAID:295|FMA:7199|EV:0100071|EMAPA:32874|EFO:0000834|CALOHA:TS-0490|BTO:0000648|BSA:0000093|ANISEED:1235303|AAO:0000246,,,,,,,,,,,,,,,,,,,,,,,,,bowel,,,,UBERON:0000160,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,intestine,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Segment of the alimentary canal extending from the stomach to the anus and, in humans and other mammals, consists of two segments, the small intestine and the large intestine.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0000162,cloaca,,"Common chamber into which the intestines and excretory system opens. Arises during development in all vertebrates, but in many it becomes subdivided, lost or incorporated into other structures.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ZFA:0005781|XAO:0000244|Wikipedia:Cloaca|VHOG:0001186|UMLS:C0008987|SCTID:370631000|SCTID:362857006|NCIT:C34127|MESH:D002988|GAID:1206|AAO:0000095,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0000162,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,cloaca,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Common chamber into which the intestines and excretory system opens. Arises during development in all vertebrates, but in many it becomes subdivided, lost or incorporated into other structures.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0000168,proximal-distal subdivision of colon,,A section dividing a colon along a proximal-distal axis.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:222905,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0000168,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,proximal-distal subdivision of colon,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A section dividing a colon along a proximal-distal axis.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_116278,lomefloxacin,,"A fluoroquinolone antibiotic, used (generally as the hydrochloride salt) to treat bacterial infections including bronchitis and urinary tract infections. It is also used to prevent urinary tract infections prior to surgery.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:6517,,,,,,CHEBI:116278,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,lomefloxacin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A fluoroquinolone antibiotic, used (generally as the hydrochloride salt) to treat bacterial infections including bronchitis and urinary tract infections. It is also used to prevent urinary tract infections prior to surgery.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001558,container identifier,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001558,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,container identifier,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://www.ebi.ac.uk/efo/EFO_0002950,pregnancy,Pregnancies|PREGN|Gestation,"The status during which female mammals carry their developing young (EMBRYOS or FETUSES) in utero before birth, beginning from FERTILIZATION to BIRTH.|The state or condition of having a developing embryo or fetus in the body (uterus), after union of an ovum and spermatozoon, during the period from conception to birth.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SNOMEDCT:289908002|NCIt:C25742|MedDRA:10036556|MESH:D011247|ICD10:Z34,,,,,,,,,,,,,,,,,,,,,,,,,Pregnancies|PREGN|Gestation,,,,efo:EFO_0002950,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,pregnancy,,,,,,,,,,,,,,,,,,,,,,,,,,,,Tomasz Adamusiak,,,,"The status during which female mammals carry their developing young (EMBRYOS or FETUSES) in utero before birth, beginning from FERTILIZATION to BIRTH.|The state or condition of having a developing embryo or fetus in the body (uterus), after union of an ovum and spermatozoon, during the period from conception to birth.",,,,,,,,
http://purl.obolibrary.org/obo/OBI_0000968,obsolete: device,,"A material entity that is designed to perform a function in a scientific investigation, but is not a reagent.",TRUE,,,,,,,instrument,,,,,,,,,,,,,,OBI development call 2012-12-17.,,true,,"2013-6-5 MHB: The following clarifications are outcomes of the May 2013 Philly Workshop. Reagents are distinguished from devices that also participate in scientific techniques by the fact that reagents are chemical or biological in nature and necessarily participate in some chemical interaction or reaction during the realization of their experimental role. By contrast, devices do not participate in such chemical reactions/interactions.  Note that there are cases where devices use reagent components during their operation, where the reagent-device distinction is less clear.  For example: (1) An HPLC machine is considered a device, but has a column that holds a stationary phase resin as an operational component.  This resin qualifies as a device if it participates purely in size exclusion, but bears a reagent role that is realized in the running of a column if it interacts electrostatically or chemically with the evaluant. The container the resin is in (“the column”) considered alone is a device. So the entire column as well as the entire HPLC machine are devices that have a reagent as an operating part.  (2) A pH meter is a device, but its electrode component bears a reagent role in virtue of its interacting directly with the evaluant in execution of an assay. (3) A gel running  box  is a device that has a metallic lead as a component that participates in a chemical reaction with the running buffer when a charge is passed through it.  This metallic lead is considered to have a reagent role as a component of this device realized in the running of a gel. In the examples above, a reagent is an operational component of a device, but the device itself does not realize a reagent role (as bearing a reagent role is not transitive across the part_of relation).  In this way, the asserted disjointness between a reagent and device holds, as both roles are never realized in the same bearer during execution of an assay.|2012-12-17 JAO: In common lab usage, there is a distinction made between devices and reagents that is difficult to model. Therefore we have chosen to specifically exclude reagents from the definition of ""device"", and are enumerating the types of roles that a reagent can perform.",obsolete device,,An autoclave is a device that sterlizes instruments or contaminated waste by applying high temperature and pressure.|A voltmeter is a measurement device which is intended to perform some measure function.,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000228,,,,,,,,,,,,,,,,,,,OBI:0000968,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: device|obsolete device,,,,,,,,,,,,,,,,,,,,,,,,,,,,PERSON: Helen Parkinson,http://purl.obolibrary.org/obo/COB_0001300,,,"A material entity that is designed to perform a function in a scientific investigation, but is not a reagent.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001611,draft NCBI component model,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001611,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,draft NCBI component model,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020278,"piece of chicken breast (with skin, raw)",,A raw piece of chicken breast that contains skin.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020278,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"piece of chicken breast (with skin, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw piece of chicken breast that contains skin.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_27565,4-aminosalicylic acid,,An aminobenzoic acid that is salicylic acid substituted by an amino group at position 4.,FALSE,,,,,,,PAS,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:41152|CHEBI:20320|CHEBI:1789,,,,,,CHEBI:27565,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,4-aminosalicylic acid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An aminobenzoic acid that is salicylic acid substituted by an amino group at position 4.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000971,food truck,,A truck which is equipped to cook and sell food.,FALSE,,,,,,,,,,,,,,"Due to the facilities on board, food trucks are often larger than other trucks with comparable mechanics.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01000971,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,food truck,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A truck which is equipped to cook and sell food.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000107,beef cross-rib roast,,A beef cut that is adjacent to the arm and includes ribs 2 through 5.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000107,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef cross-rib roast,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A beef cut that is adjacent to the arm and includes ribs 2 through 5.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_47956,thiocarboxamide,,Any primary amide having its amide oxygen replaced by sulfur.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:47956,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,thiocarboxamide,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any primary amide having its amide oxygen replaced by sulfur.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0000697,Helicos sequencing assay,,A DNA sequencing by synthesis assay that identifiies the sequnece of billions of DNA molecules immobilized to a surface using DNA polymerase and fluorescently labeled nucleotides added one at a time. The sequencing process does not require an amplification step and is typically able to produce reads of 25 base pair length.,FALSE,,,,,,,true single molecule sequencing,,,,,,,,,,,,,,url:https://en.wikipedia.org/wiki/Helicos_single_molecule_fluorescent_sequencing,,,,,Helicos sequencing assay,,PMID: 18388294. Single-molecule DNA sequencing of a viral genome.,,,http://purl.obolibrary.org/obo/IAO_0000120,NCBI SRA: HELICOS,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0000697,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Helicos sequencing assay,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra,,,,A DNA sequencing by synthesis assay that identifiies the sequnece of billions of DNA molecules immobilized to a surface using DNA polymerase and fluorescently labeled nucleotides added one at a time. The sequencing process does not require an amplification step and is typically able to produce reads of 25 base pair length.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00001041,cow food product,,A food product that is derived from some cow.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00001041,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,cow food product,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A food product that is derived from some cow.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00051084,Indian Ocean region,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00051084,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Indian Ocean region,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C15986,Pharmacotherapy,"drug therapy|Treatment With Medication|Pharmacotherapy|Pharmacological Treatments|Pharmacological Treatment|Pharmaceutical Therapy, NOS|Pharmaceutical Therapy|Drug Therapy",Treatment of disease through the use of drugs.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"drug therapy|Treatment With Medication|Pharmacotherapy|Pharmacological Treatments|Pharmacological Treatment|Pharmaceutical Therapy, NOS|Pharmaceutical Therapy|Drug Therapy",,,,NCIT:C15986,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Pharmacotherapy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Treatment of disease through the use of drugs.,,,,,,,,
http://purl.obolibrary.org/obo/SO_0001410,experimental_feature,experimental_output_artefact|experimental output artefact,A region which is the result of some arbitrary experimental procedure. The procedure may be carried out with biological material or inside a computer.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,experimental_output_artefact|experimental output artefact,,,,SO:0001410,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/so.owl,http://purl.oboInOwllibrary.org/oboInOwl/so#SOFA,,,,,,,,experimental_feature,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A region which is the result of some arbitrary experimental procedure. The procedure may be carried out with biological material or inside a computer.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100485,child care or education worker,,A role inhering in a person that is realized when the bearer is engaged in child care or education work.,FALSE,,,,,,,Child Care/Education Worker,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100485,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-01-23T00:42:19.315Z,,,,,,,,,,,,,,,,,,,child care or education worker,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A role inhering in a person that is realized when the bearer is engaged in child care or education work.,,,,,,,,
http://www.ebi.ac.uk/efo/EFO_0004949,clinical temporal measurement,clinical event,A temporal measurement related to disease progression,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,clinical event,,,,efo:EFO_0004949,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,clinical temporal measurement,,,,,,,,,,,,,,,,,,,,,,,,,,,,Helen Parkinson,,,,A temporal measurement related to disease progression,,,,,,,,
http://purl.obolibrary.org/obo/HP_0002829,Arthralgia,Joint pain|Arthralgias,Joint pain.,FALSE,,,,,,,,,,,,,,"Arthralgia is distinct from Arthritis, which is not a symptom but a diagnosis with articular inflammation or signs of osteoarthritis.",,,,,,,,,,,,,,,,,,UMLS:C0003862|SNOMEDCT_US:57676002,,,,,,,,,,,,,,,,,,,,,,,,,Joint pain|Arthralgias,,,,HP:0002829,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Arthralgia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Joint pain.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102200,practical salinity unit,,A unitless measure of salinity that is equivalent to per thousand.,FALSE,,,,,,,PSU,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102200,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2026-04-13T19:52:38.515Z,,,,,,,,,,,,,,,,,,,practical salinity unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A unitless measure of salinity that is equivalent to per thousand.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002069,obsolete: SIR,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,Replaced by domain appropriate term created in the Comprehensive Antibiotic Resistance Database (CARD).,,,,,,,,,,,,,,,,,,,GENEPIO:0002069,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: SIR,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ARO_3007397,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_10773,bubonic plague,,"A plague that results_in infection located_in lymph node producing a bubo, which is an inflamed, necrotic, and hemorrhagic lymphoid tissue. The infection has_symptom enlarged, tender lymph nodes, has_symptom fever, has_symptom chills and has_symptom prostration.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:10773,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,bubonic plague,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A plague that results_in infection located_in lymph node producing a bubo, which is an inflamed, necrotic, and hemorrhagic lymphoid tissue. The infection has_symptom enlarged, tender lymph nodes, has_symptom fever, has_symptom chills and has_symptom prostration.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002170,test drug minimum concentration specification,,A value specification which describes the minimum concentration of a drug applied during an an assay.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002170,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,test drug minimum concentration specification,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0002101,,,,Damion Dooley,,,,A value specification which describes the minimum concentration of a drug applied during an an assay.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_26004,phenylpropanoid,,"Any organic aromatic compound with a structure based on a phenylpropane skeleton. The class includes naturally occurring phenylpropanoid esters, flavonoids, anthocyanins, coumarins and many small phenolic molecules as well as their semi-synthetic and synthetic analogues. Phenylpropanoids are also precursors of lignin.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:26004,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,phenylpropanoid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Any organic aromatic compound with a structure based on a phenylpropane skeleton. The class includes naturally occurring phenylpropanoid esters, flavonoids, anthocyanins, coumarins and many small phenolic molecules as well as their semi-synthetic and synthetic analogues. Phenylpropanoids are also precursors of lignin.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C53531,Non-Neoplastic Disorder by Site,Non-Neoplastic Disorder by Site|Non-Neoplastic Disease by Site,A term that refers to the classification of a non-neoplastic disorder according to the anatomic site that is involved in the pathologic process.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Non-Neoplastic Disorder by Site|Non-Neoplastic Disease by Site,,,,NCIT:C53531,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Non-Neoplastic Disorder by Site,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A term that refers to the classification of a non-neoplastic disorder according to the anatomic site that is involved in the pathologic process.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001980,DNase-Hypersensitivity strategy,,"Sequencing of hypersensitive sites, or segments of open chromatin that are more readily cleaved by DNaseI.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI SRA: DNase-Hypersensitivity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001980,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DNase-Hypersensitivity strategy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Sequencing of hypersensitive sites, or segments of open chromatin that are more readily cleaved by DNaseI.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510035,salt or sodium free claim,,"A claim that a food is sodium-free or salt-free, and any claim likely to have the same meaning for the consumer, may only be made where the product contains no more than 0,005 g of sodium, or the equivalent value for salt, per 100 g. [REGULATION (EC) No 1924/2006 Corrigendum 2007-01-18].

Food having less than 5 milligrams of salt or sodium per amount customarily consumed (or for meals and main dishes, less than 5 miligrams of salt or sodium per labeled serving). Such foods must not contain an ingredient that is salt or sodium or generally understood to comtain salt or sodium except where the ingredient listed is footnoted '*adds a trivial amount of {salt or sodium}' [US FDA]",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0035,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510035,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,salt or sodium free claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A claim that a food is sodium-free or salt-free, and any claim likely to have the same meaning for the consumer, may only be made where the product contains no more than 0,005 g of sodium, or the equivalent value for salt, per 100 g. [REGULATION (EC) No 1924/2006 Corrigendum 2007-01-18].

Food having less than 5 milligrams of salt or sodium per amount customarily consumed (or for meals and main dishes, less than 5 miligrams of salt or sodium per labeled serving). Such foods must not contain an ingredient that is salt or sodium or generally understood to comtain salt or sodium except where the ingredient listed is footnoted '*adds a trivial amount of {salt or sodium}' [US FDA]",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000013,beef top round (raw),,A raw beef top round cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000013,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef top round (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef top round cut.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0015865,pancreaticosplenic lymph node,pancreaticosplenic node,"Lymph nodes of the pancreatic tail and spleen, receiving afferents from both organs plus the greater curvature of the stomach; they drain to the celiac lymph nodes.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SCTID:280723006|FMA:12799,,,,,,,,,,,,,,,,,,,,,,,,,pancreaticosplenic node,,,,UBERON:0015865,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,pancreaticosplenic lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Lymph nodes of the pancreatic tail and spleen, receiving afferents from both organs plus the greater curvature of the stomach; they drain to the celiac lymph nodes.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0015869,retropharyngeal lymph node,retropharyngeal node,"The retropharyngeal lymph nodes, from one to three in number, lie in the buccopharyngeal fascia, behind the upper part of the pharynx and in front of the arch of the atlas, being separated, however, from the latter by the Longus capitis. Their afferents drain the nasal cavities, the nasal part of the pharynx, and the auditory tubes. Their efferents pass to the superior deep cervical glands. They are in the retropharyngeal space.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Retropharyngeal_lymph_nodes|UMLS:C0229737|SCTID:167263004|NCIT:C77649|MA:0003070|FMA:61237|EMAPA:37724,,,,,,,,,,,,,,,,,,,,,,,,,retropharyngeal node,,,,UBERON:0015869,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,retropharyngeal lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The retropharyngeal lymph nodes, from one to three in number, lie in the buccopharyngeal fascia, behind the upper part of the pharynx and in front of the arch of the atlas, being separated, however, from the latter by the Longus capitis. Their afferents drain the nasal cavities, the nasal part of the pharynx, and the auditory tubes. Their efferents pass to the superior deep cervical glands. They are in the retropharyngeal space.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0015867,cystic lymph node,cystic node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SCTID:46081008|FMA:12804,,,,,,,,,,,,,,,,,,,,,,,,,cystic node,,,,UBERON:0015867,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,cystic lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0015860,visceral abdominal lymph node,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:66178,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0015860,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,visceral abdominal lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0015868,lymph node of epiploic foramen,nodus lymphoideus foraminalis|nodus foraminalis|node of anterior border of omental foramen|node of anterior border of epiploic foramen|lymph node of anterior border of omental foramen|lymph node of anterior border of epiploic foramen,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:12805,,,,,,,,,,,,,,,,,,,,,,,,,nodus lymphoideus foraminalis|nodus foraminalis|node of anterior border of omental foramen|node of anterior border of epiploic foramen|lymph node of anterior border of omental foramen|lymph node of anterior border of epiploic foramen,,,,UBERON:0015868,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,lymph node of epiploic foramen,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0015863,gastric lymph node,nodi lymphoidei gastrici|gastric node,A lymph node along the left gastric artery or greater omentum.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Gastric_lymph_nodes|UMLS:C1282334|NCIT:C92222|MA:0003071|FMA:12796,,,,,,,,,,,,,,,,,,,,,,,,,nodi lymphoidei gastrici|gastric node,,,,UBERON:0015863,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,gastric lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A lymph node along the left gastric artery or greater omentum.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0015866,pyloric lymph node,pyloric node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SCTID:280127001|FMA:12802,,,,,,,,,,,,,,,,,,,,,,,,,pyloric node,,,,UBERON:0015866,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,pyloric lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000454,bison chuck (raw),,A raw bison chuck cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000454,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,bison chuck (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw bison chuck cut.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00003895,paper product,,A product which is composed primarily of paper.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00003895,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,paper product,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A product which is composed primarily of paper.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C3430,Urinary System Disorder,urinary tract disorder|Urologic Disorder|Urinary System Disorder|Disorder of Urinary System,A non-neoplastic or neoplastic disorder affecting the urinary system.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,urinary tract disorder|Urologic Disorder|Urinary System Disorder|Disorder of Urinary System,,,,NCIT:C3430,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Urinary System Disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A non-neoplastic or neoplastic disorder affecting the urinary system.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C91106,Clinical or Research Assessment Answer,Clinical or Research Assessment Response|Clinical or Research Assessment Question Response|Clinical or Research Assessment Answer,A statement (either spoken or written) that is made in reply to a clinical research assessment question.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Clinical or Research Assessment Response|Clinical or Research Assessment Question Response|Clinical or Research Assessment Answer,,,,NCIT:C91106,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Clinical or Research Assessment Answer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A statement (either spoken or written) that is made in reply to a clinical research assessment question.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0035371,retroperitoneal lymph node,retroperitoneal node,A lymph node located in the retroperitoneal space.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0229802|SCTID:249613000|NCIT:C98189|FMA:16694,,,,,,,,,,,,,,,,,,,,,,,,,retroperitoneal node,,,,UBERON:0035371,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,retroperitoneal lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A lymph node located in the retroperitoneal space.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0035162,infraclavicular lymph node,nodus lymphaticus infraclavicularis axillae|infraclavicular node|deltopectoral node|deltopectoral lymph node,A lymph node located in the area below the clavicle.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Deltopectoral_lymph_nodes|UMLS:C0229743|SCTID:9659009|NCIT:C63705|FMA:14193,,,,,,,,,,,,,,,,,,,,,,,,,nodus lymphaticus infraclavicularis axillae|infraclavicular node|deltopectoral node|deltopectoral lymph node,,,,UBERON:0035162,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,infraclavicular lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A lymph node located in the area below the clavicle.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0004323,Abnormality of body weight,Abnormality of body weight,An abnormal increase or decrease of weight or an abnormal distribution of mass in the body.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4025357|UMLS:C0878621,,,,,,,,,,,,,,,,,,,,,,,HP:0010718,,Abnormality of body weight,,,,HP:0004323,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormality of body weight,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An abnormal increase or decrease of weight or an abnormal distribution of mass in the body.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0004325,Decreased body weight,Weight less than 3rd percentile|Low weight|Low body weight|Decreased weight|Decreased body weight,Abnormally low body weight.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C1844806|UMLS:C1262477|UMLS:C0041667|SNOMEDCT_US:89362005|SNOMEDCT_US:262285001|SNOMEDCT_US:248342006|SNOMEDCT_US:161832001,,,,,,,,,,,,,,,,,,,,,,,HP:0001826|HP:0001823,,Weight less than 3rd percentile|Low weight|Low body weight|Decreased weight|Decreased body weight,,,,HP:0004325,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Decreased body weight,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Abnormally low body weight.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0004324,Increased body weight,Increased body weight,Abnormally increased body weight.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0043094|SNOMEDCT_US:8943002|SNOMEDCT_US:262286000|SNOMEDCT_US:161831008,,,,,,,,,,,,,,,,,,,,,,,HP:0045083,,Increased body weight,,,,HP:0004324,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Increased body weight,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Abnormally increased body weight.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000012,beef top round,,A beef cut that comes from the inside of the rear leg.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000012,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef top round,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A beef cut that comes from the inside of the rear leg.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03309967,pork tenderloin (raw),,A raw pork tenderloin cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://bioregistry.io/reference/siren:F9967,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03309967,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pork tenderloin (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw pork tenderloin cut.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0001305,genotype information,,"a genetic characteristics information that is about the genetic material of an organism and minimally includes information about the genetic background and can in addition contain information about specific alleles, genetic modifications, etc.",FALSE,,,,,,,,,,,,,,,,,,,,,Group: OBI group,,,,"discussed on San Diego OBI workshop, March 2011",genotype information,,"Genotype information can be: Mus musculus wild type (in this case the genetic population background information is Mus musculus), C57BL/6J  Hnf1a+/- (in this case, C57BL/6J is the genetic population background information and Hnf1a+/- is the allele information",,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0001305,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,genotype information,,,,,,,,,,,,,,,,,,,,,,,,,,,,Group: OBI group,,,,"a genetic characteristics information that is about the genetic material of an organism and minimally includes information about the genetic background and can in addition contain information about specific alleles, genetic modifications, etc.",,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01001479,fluid astronomical body part,,A part of an astronomical body which is primarily composed of fluid.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01001479,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,fluid astronomical body part,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A part of an astronomical body which is primarily composed of fluid.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_25558,organonitrogen heterocyclic antibiotic,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:25558,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,organonitrogen heterocyclic antibiotic,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_24870,ion,,A molecular entity having a net electric charge.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:24870,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,ion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A molecular entity having a net electric charge.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000273,lamb rib (raw),,A raw lamb rib.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000273,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lamb rib (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw lamb rib.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00013888,"populated place, Benin",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00013888,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Benin",http://purl.obolibrary.org/obo/GAZ_00000904,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UO_1010029,quart based unit,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:1010029,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,quart based unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UO_1010028,pint based unit,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:1010028,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,pint based unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UO_1010022,nautical mile based unit,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:1010022,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,nautical mile based unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UO_1010021,cable based unit,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:1010021,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,cable based unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UO_1010026,fluid ounce based unit,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:1010026,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,fluid ounce based unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UO_1010020,fathom based unit,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:1010020,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,fathom based unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UO_1010027,gill based unit,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:1010027,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,gill based unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000604,vehicle,,A vehicle is a mobile machine which transports people or cargo.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01000604,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,vehicle,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A vehicle is a mobile machine which transports people or cargo.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0002383,Infectious encephalitis,Brain inflammation,"A disorder of the brain caused by an infectious agent that presents with fever, headache, and an altered level of consciousness. There may also be focal or multifocal neurologic deficits, and focal or generalized seizure activity.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0014038|SNOMEDCT_US:45170000,,,,,,,,,,,,,,,,,,,,,,,,,Brain inflammation,,,,HP:0002383,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Infectious encephalitis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A disorder of the brain caused by an infectious agent that presents with fever, headache, and an altered level of consciousness. There may also be focal or multifocal neurologic deficits, and focal or generalized seizure activity.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_1532,pleural disease,,"A thoracic disease which may involve inflammation of pleura, collection of air within the pleural cavity, abnormal collection of pleural fluid, abnormal growths on the pleura (pleural tumor) and pleural plaques. The main causes of pleural diseases including pleural effusions are congestive heart failure, malignancy, parapneumonic infections and pulmonary embolism.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:1532,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,pleural disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A thoracic disease which may involve inflammation of pleura, collection of air within the pleural cavity, abnormal collection of pleural fluid, abnormal growths on the pleura (pleural tumor) and pleural plaques. The main causes of pleural diseases including pleural effusions are congestive heart failure, malignancy, parapneumonic infections and pulmonary embolism.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03411301,algae,,"An informal term for a large, diverse group of photosynthetic eukaryotic organisms that are not necessarily closely related, and is thus polyphyletic.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=B1301,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03411301,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,algae,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An informal term for a large, diverse group of photosynthetic eukaryotic organisms that are not necessarily closely related, and is thus polyphyletic.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000054,beef chuck eye roll,,The top portion of the chuck roll that is separated from the under-blade section.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000054,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef chuck eye roll,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The top portion of the chuck roll that is separated from the under-blade section.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001604,mass spectrometry project method,,Select Mass Spectrometry if that is the primary method,FALSE,,,,,,,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/books/NBK54364/,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001604,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,mass spectrometry project method,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,Select Mass Spectrometry if that is the primary method,,,,mass spectrometry,,,,
http://purl.obolibrary.org/obo/DOID_214,teeth hard tissue disease,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:214,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,teeth hard tissue disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_216,dental caries,,"A teeth hard tissue disease that is characterized by damage to a tooth that can happen when decay-causing bacteria in your mouth make acids that attack the tooth’s surface, or enamel.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:216,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,dental caries,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A teeth hard tissue disease that is characterized by damage to a tooth that can happen when decay-causing bacteria in your mouth make acids that attack the tooth’s surface, or enamel.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_217,enamel caries,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:217,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,enamel caries,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C25190,Person,Person|Individual,A human being.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Person|Individual,,,,NCIT:C25190,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Person,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A human being.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100665,childcare worker role,,A role inhering in a person that is realized when the bearer is engaged in child care work.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100665,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788,2023-01-23T00:42:19.315Z,,,,,,,,,,,,,,,,,,,childcare worker role,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A role inhering in a person that is realized when the bearer is engaged in child care work.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490142,paperboard container with laminate liner,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0142,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490142,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,paperboard container with laminate liner,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510238,traditional type of production and/or processing claim,,"The production and/or processing of a food that has been transmitted from generation to generation through oral tradition or other means and has been applied prior to the Second World War and remains in use (taking into account cases where composition was abandoned for a time and then reinstated) despite its adjustment to binding rules from national or EU food hygiene regulations or the incorporation of technological progress, under the condition that production and/or processing remains in line with methods used originally and that the food""s intrinsic features such as its physical, chemical, microbiological or organoleptic features are maintained. [Traditional Foods in Europe, EuroFIR Synthesis report No 6, 2009]",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0238,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510238,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,traditional type of production and/or processing claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The production and/or processing of a food that has been transmitted from generation to generation through oral tradition or other means and has been applied prior to the Second World War and remains in use (taking into account cases where composition was abandoned for a time and then reinstated) despite its adjustment to binding rules from national or EU food hygiene regulations or the incorporation of technological progress, under the condition that production and/or processing remains in line with methods used originally and that the food""s intrinsic features such as its physical, chemical, microbiological or organoleptic features are maintained. [Traditional Foods in Europe, EuroFIR Synthesis report No 6, 2009]",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002004,draft tuberculosis - case laboratory testing,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002004,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,draft tuberculosis - case laboratory testing,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_80274,Mus musculus gentilulus,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,Mus musculus gentilulus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:80274,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Mus musculus gentilulus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001117,organs or organ parts,,"An object aggregate which has as members whole organs or parts of organs, possibly from different organisms.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001117,,,,,,,,,,,,,,2021-04-19T23:36:25Z,,,,,,,,,,,,,,,,,,,organs or organ parts,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://orcid.org/0000-0002-8844-9165,,,,"An object aggregate which has as members whole organs or parts of organs, possibly from different organisms.",,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000190,Nubian Eastern,,"'The Nubians are known as people of the Nile and are located between Egypt and northern Sudan.' taken from: Culture and Customs of Sudan. Written by De Kwame Essien, Toyin Falola Ph.D.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000190,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Nubian Eastern,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"'The Nubians are known as people of the Nile and are located between Egypt and northern Sudan.' taken from: Culture and Customs of Sudan. Written by De Kwame Essien, Toyin Falola Ph.D.",,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000195,Mahas,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000195,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Mahas,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000191,Mattokki,,A Nubian Northern population with a population size of 0.050 million,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000191,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Mattokki,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Nubian Northern population with a population size of 0.050 million,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000199,Kalenjin,,The Kalenjin are a Nilotic Eastern population with a population size of 3 million.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000199,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Kalenjin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The Kalenjin are a Nilotic Eastern population with a population size of 3 million.,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000194,Banda,,A Ubangi Central population with a population size of 1.5 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000194,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Banda,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Ubangi Central population with a population size of 1.5 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000198,Luo,,"A Nilotic Eastern population with a population size of Nilo-Saharan, Luo, River-Lake",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000198,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Luo,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A Nilotic Eastern population with a population size of Nilo-Saharan, Luo, River-Lake",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100101,partially vaccinated,,A vaccination status in which an individual has started but not yet fully completed a vaccine series authorized and administered according to the regional health institutional guidance.,FALSE,,,,,,,,,,,,,,"In general, people are considered partially vaccinated 2 weeks after their first dose in a single-dose or multi-dose vaccine series.",,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100101,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,partially vaccinated,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A vaccination status in which an individual has started but not yet fully completed a vaccine series authorized and administered according to the regional health institutional guidance.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_15,reproductive system disease,,A disease of anatomical entity that is located_in reproductive system organs.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:15,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,reproductive system disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A disease of anatomical entity that is located_in reproductive system organs.,,,,,,,,
http://purl.obolibrary.org/obo/COB_0000021,gross anatomical part,,A part of a multicellular organism that is a collection of cell components that are not all contained in one cell.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,COB:0000021,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/cob.owl,,,,,,,,,gross anatomical part,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A part of a multicellular organism that is a collection of cell components that are not all contained in one cell.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100962,diagnostic target presence,,A data field which describes the binary value of the result from a diagnostic test.,FALSE,,,,,,,PCDS:diagnostic_target_presence_*,,,,,,,"PCDS: Select a value from the pick list provided, to describe whether a target was determined to be present or absent within a sample.",,,,,,,,,,,,,,PCDS: diagnostic target present,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100962,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,diagnostic target presence,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the binary value of the result from a diagnostic test.,,PCDS: The binary value of the result from a diagnostic test.,,,,,,
http://purl.obolibrary.org/obo/HP_0010978,Abnormality of immune system physiology,,A functional abnormality of the immune system.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4023616,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0010978,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormality of immune system physiology,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A functional abnormality of the immune system.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_45367,rifabutin,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:8857|CHEBI:45364,,,,,,CHEBI:45367,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,rifabutin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0010758,subdivision of organism along appendicular axis,appendicular segment|appendage segment,"A major subdivision of an organism that divides an organism along an axis perpedicular to the main body anterior-posterior axis. In vertebrates, this is typically a fin or limb segment. In insects, this includes segments of appendages such as antennae, as well as segments of the insect leg.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FBbt:00007018,,,,,,,,,,,,,,,,,,,,,,,,,appendicular segment|appendage segment,,,,UBERON:0010758,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,subdivision of organism along appendicular axis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A major subdivision of an organism that divides an organism along an axis perpedicular to the main body anterior-posterior axis. In vertebrates, this is typically a fin or limb segment. In insects, this includes segments of appendages such as antennae, as well as segments of the insect leg.",,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0005070,neoplasm,other neoplasm,"A benign or malignant tissue growth resulting from uncontrolled cell proliferation. Benign neoplastic cells resemble normal cells without exhibiting significant cytologic atypia, while malignant cells exhibit overt signs such as dysplastic features, atypical mitotic figures, necrosis, nuclear pleomorphism, and anaplasia. Representative examples of benign neoplasms include papillomas, cystadenomas, and lipomas; malignant neoplasms include carcinomas, sarcomas, lymphomas, and leukemias.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0027651|SCTID:55342001|ONCOTREE:OTHER|NCIT:C3262|MESH:D009369|MEDGEN:10294|ICD9:239.9|ICD9:239.8|ICD9:140-239|ICD10CM:C7B-C7B|ICD10CM:C7A-C7A|ICD10CM:C00-D49|HP:0002664|EFO:0000616|DOID:14566,,,,,,,,,,,,,,,,,,,,,,,,cell process disease,tumour disease|tumour|tumor disease|tumor|neoplastic growth|neoplastic disease|neoplasm (disease)|neoplasm|neoplasia|disease of cellular proliferation,other neoplasm,,,MONDO:0005070,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,neoplasm,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A benign or malignant tissue growth resulting from uncontrolled cell proliferation. Benign neoplastic cells resemble normal cells without exhibiting significant cytologic atypia, while malignant cells exhibit overt signs such as dysplastic features, atypical mitotic figures, necrosis, nuclear pleomorphism, and anaplasia. Representative examples of benign neoplasms include papillomas, cystadenomas, and lipomas; malignant neoplasms include carcinomas, sarcomas, lymphomas, and leukemias.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470111,preservation by storage in modified atmosphere,,"Preservation by storage in an atmosphere in which the concentrations of oxygen and carbon dioxide are different from those in air. This reduces microbial and enzymatic activity; often used commercially in conjunction with refrigeration (e.g., refrigerated rail cars) for fresh meat and produce.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0111,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470111,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,preservation by storage in modified atmosphere,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Preservation by storage in an atmosphere in which the concentrations of oxygen and carbon dioxide are different from those in air. This reduces microbial and enzymatic activity; often used commercially in conjunction with refrigeration (e.g., refrigerated rail cars) for fresh meat and produce.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C113644,Person Role Title,title|Title|Role Title|Person Role Title|Person Role,An identifying designation assigned to an individual that corresponds with their function.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,title|Title|Role Title|Person Role Title|Person Role,,,,NCIT:C113644,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Person Role Title,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An identifying designation assigned to an individual that corresponds with their function.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C71394,Adoptive Relative,Adoptive Relative|Adoptive Relation,A family relation established by a legal proceeding that creates a parent-child relation between persons not related by blood.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Adoptive Relative|Adoptive Relation,,,,NCIT:C71394,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Adoptive Relative,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A family relation established by a legal proceeding that creates a parent-child relation between persons not related by blood.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C42775,E-mail Address,Email Address|Email|Electronic Mail Address|E-mail Address|E-mail|http://purl.obolibrary.org/obo/IAO_0000429,A text string identifier for a location to which e-mail can be delivered.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley's note: It can also be used as an authorization token in some identification processes.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Email Address|Email|Electronic Mail Address|E-mail Address|E-mail|http://purl.obolibrary.org/obo/IAO_0000429,,,,NCIT:C42775,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,E-mail Address,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A text string identifier for a location to which e-mail can be delivered.,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_10141,Cavia porcellus,,,FALSE,,,,,,,guinea pig|domestic guinea pig,,,,,,,,,,,,,,,,,,,Cavia porcellus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:10141,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Cavia porcellus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000230,beef small end rib roast (raw),,A raw beef small end rib roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000230,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef small end rib roast (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef small end rib roast.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00001304,food fermentation,,"A fermentation process in which either carbohydrates, proteins or fats are modified through microbial, enzymatic and/or other biological process.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0104,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00001304,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food fermentation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A fermentation process in which either carbohydrates, proteins or fats are modified through microbial, enzymatic and/or other biological process.",,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00003032,fresh animal manure,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00003032,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,fresh animal manure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510272,Pacific food claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0272,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510272,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,Pacific food claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510222,food allergen labelling about celery and products thereof,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0222,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510222,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food allergen labelling about celery and products thereof,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000150,Gurunsi,,A Gurma population with a population size of 0.8 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000150,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Gurunsi,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Gurma population with a population size of 0.8 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000151,Gurma,,A Western African population with a population size of 3.3 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000151,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Gurma,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Western African population with a population size of 3.3 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000153,Dagaaba,,The Dagaaba are a Western African population with a population size of 1 million.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000153,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Dagaaba,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The Dagaaba are a Western African population with a population size of 1 million.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00004532,piece(s) of cow,,One or more pieces of cows.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00004532,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece(s) of cow,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,One or more pieces of cows.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C42856,Sponge,Sponge,"A soft flexible, absorbent pad usually made from natural material such as gauze or cotton, used to absorb blood and other fluids, as in surgery or the dressing of a wound. The term also refers to a small absorbent contraceptive pad that contains a spermicide and is placed against the cervix of the uterus before sexual intercourse.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Sponge,,,,NCIT:C42856,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Sponge,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A soft flexible, absorbent pad usually made from natural material such as gauze or cotton, used to absorb blood and other fluids, as in surgery or the dressing of a wound. The term also refers to a small absorbent contraceptive pad that contains a spermicide and is placed against the cervix of the uterus before sexual intercourse.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00002572,"cut of beef, british",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00002572,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"cut of beef, british",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
https://w3id.org/linkml/Example,Example,,Usage example and description.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,linkml:Example,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Usage example and description.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0002507,abdominal lymph node,lymph node of abdomen|abdomen lymph node,A lymph node that is part of an abdomen [Automatically generated definition].,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SCTID:245342005|MA:0002827|FMA:12787|EMAPA:35992,,,,,,,,,,,,,,,,,,,,,,,,,lymph node of abdomen|abdomen lymph node,,,,UBERON:0002507,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,abdominal lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A lymph node that is part of an abdomen [Automatically generated definition].,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0002509,mesenteric lymph node,mesenteric node,"The lymph nodes located in the mesentery, of which there are 3 classes: ileocolic, juxtaintestinal mesenteric, and central superior group.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Mesenteric_lymph_nodes|UMLS:C0229792|NCIT:C77641|MA:0002829|FMA:12795|EMAPA:35561|BTO:0000767,,,,,,,,,,,,,,,,,,,,,,,,,mesenteric node,,,,UBERON:0002509,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,mesenteric lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The lymph nodes located in the mesentery, of which there are 3 classes: ileocolic, juxtaintestinal mesenteric, and central superior group.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0002508,celiac lymph node,terminal ventral aortic node|nodus lymphaticus coeliacus|coeliac node|coeliac axis lymph node|celiac node|celiac axis lymph node,"The visceral glands that are associated with the branches of the celiac artery, including the gastric, hepatic, and pancreaticolienal (splenic) lymph nodes.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Celiac_lymph_node|UMLS:C0229766|SCTID:245343000|NCIT:C65166|MA:0002828|FMA:12792,,,,,,,,,,,,,,,,,,,,,,,,,terminal ventral aortic node|nodus lymphaticus coeliacus|coeliac node|coeliac axis lymph node|celiac node|celiac axis lymph node,,,,UBERON:0002508,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,celiac lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The visceral glands that are associated with the branches of the celiac artery, including the gastric, hepatic, and pancreaticolienal (splenic) lymph nodes.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000210,beef ribeye steak (raw),,A raw beef ribeye steak.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000210,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef ribeye steak (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef ribeye steak.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100480,prevalence metrics,prevalence_metrics|prevalence metrics,A data field which describes metrics regarding the prevalence of the pathogen of interest obtained from a surveillance project.,FALSE,,,,,,,PCDS:prevalence_metrics,,,,,,,"PCDS: Risk assessment requires detailed information regarding the quantities of a pathogen in a specified location, commodity, or environment. As such, it is useful for risk assessors to know what types of information are available through documented methods and results. Provide the metric types that are available in the surveillance project sample plan by selecting them from the pick list. The metrics of interest are ' Number of total samples collected', 'Number of positive samples', 'Average count of hazard organism', 'Average count of indicator organism'. You do not need to provide the actual values, just indicate that the information is available.",,,,,,,,,,,,,,"PCDS: Number of total samples collected, Number of positive samples",,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,prevalence_metrics|prevalence metrics,prevalence metrics slot,,,,GENEPIO:0100480,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-12-22T00:55:53.808Z,,,,,,,,,,,,,,,,,,,prevalence metrics,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes metrics regarding the prevalence of the pathogen of interest obtained from a surveillance project.,,PCDS: Metrics regarding the prevalence of the pathogen of interest obtained from a surveillance project.,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490190,aluminum foil wrapper,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0190,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490190,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,aluminum foil wrapper,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0044986,lymphoid system disorder,lymphoid system disease or disorder|lymphoid system disease|disorder of lymphoid system|disease or disorder of lymphoid system|disease of lymphoid system,A disease or disorder that involves the lymphoid system.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0024228|SCTID:111590001|MEDGEN:9829,,,,,,,,,,,,,,,,,,,,,,,,,lymphoid system disease or disorder|lymphoid system disease|disorder of lymphoid system|disease or disorder of lymphoid system|disease of lymphoid system,,,,MONDO:0044986,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,,,,,,,,,lymphoid system disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A disease or disorder that involves the lymphoid system.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_1639,skeletal tuberculosis,,An extrapulmonary tuberculosis that results in formation of lesions located in bone.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:1639,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,skeletal tuberculosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An extrapulmonary tuberculosis that results in formation of lesions located in bone.,,,,,,,,
http://purl.obolibrary.org/obo/IDO_0000531,host,,An organism bearing a host role.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,IDO:0000531,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ido.owl,,,,,,,,,host,,http://purl.obolibrary.org/obo/OBI_0000925,,,,,,,,,,,,,,,,,,,,,,,,,,Lindsay Cowell|Alexander Diehl|Albert Goldfain,,,,An organism bearing a host role.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_14456,Brucella melitensis brucellosis,,"A brucellosis that involves an infection caused by Brucella melitensis in cattle, goats, sheep and humans. The disease has_symptom fever, has_symptom malaise, has_symptom anorexia, has_symptom limb pain and has_symptom back pain.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:14456,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,Brucella melitensis brucellosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A brucellosis that involves an infection caused by Brucella melitensis in cattle, goats, sheep and humans. The disease has_symptom fever, has_symptom malaise, has_symptom anorexia, has_symptom limb pain and has_symptom back pain.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_14457,Brucella abortus brucellosis,,"A brucellosis that involves an infection caused by Brucella abortus in cattle and humans. The disease has_symptom fever, has_symptom chills, has_symptom sweats, has_symptom weight loss, has_symptom malaise, has_symptom headaches, has_symptom myalgia, and has_symptom arthralgia.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:14457,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,Brucella abortus brucellosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A brucellosis that involves an infection caused by Brucella abortus in cattle and humans. The disease has_symptom fever, has_symptom chills, has_symptom sweats, has_symptom weight loss, has_symptom malaise, has_symptom headaches, has_symptom myalgia, and has_symptom arthralgia.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001654,geographic location datum,,"A geographical location datum is a datum that refers to a real, hypothesized or fanciful spatial location",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001654,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,geographic location datum,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"A geographical location datum is a datum that refers to a real, hypothesized or fanciful spatial location",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100295,exposure datum,,A data item that describes an event in which exposure to a stressor may have occurred.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100295,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,exposure datum,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data item that describes an event in which exposure to a stressor may have occurred.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490386,carbamide-formaldehyde container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0386,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490386,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,carbamide-formaldehyde container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000014,canal,,"Artificial watercourse with no flow or a controlled flow used for navigation, drainage or irrigation.",FALSE,,,,,,,,,,,,,,"This class refers to the water contained in a canal channel, and not the channel itself.",,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Canal|TGN:51252|SWEETRealm:Canal|Geonames:H.CNL|FTT:408|FTT:407|FTT:395|FTT:129|EcoLexicon:canal,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00000014,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,canal,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Artificial watercourse with no flow or a controlled flow used for navigation, drainage or irrigation.",,,,,,,,
http://purl.obolibrary.org/obo/OBI_0001627,country name,,A textual entity that denotes a geographic location that is a site or part of a site that is identified as a country in the political geography.,FALSE,,,,,,,,,,,,,http://purl.obolibrary.org/obo/NCIT_C25464,"Damion Dooley's note: A 'sovereign state' entity should have attribute or relationships to measurables - population, size, name, etc.  So e.g. "" 'country name' inheres in some 'sovereign state/country'"".

Also note historical name issue (Myanmar vs Burma) and diplomatic name issue (Taiwan vs ""Republic of China"").  Both point to needing a single entity with multiple names.",,,,,,,Website: http://en.wikipedia.org/wiki/Country|NIAID GSCID-BRC metadata working group,,,,,country name,,,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0001627,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,country name,,,,,,,Specimen Collection Location - Country,,,,,,,,,,,,,,,,,,,,,"Person: Chris Stoeckert, Jie Zheng",,,,A textual entity that denotes a geographic location that is a site or part of a site that is identified as a country in the political geography.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0015859,hepatic lymph node,portal lymph node|nodi lymphoidei hepatici|lymphoglandulæ hepaticæ|lymphoglandulae hepaticae|hepatic node,Any of the lymph nodes adjacent to the stomach and duodenum.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Hepatic_lymph_nodes|UMLS:C0229769|SCTID:280480005|NCIT:C77640|MA:0003072|FMA:12798,,,,,,,,,,,,,,,,,,,,,,,,,portal lymph node|nodi lymphoidei hepatici|lymphoglandulæ hepaticæ|lymphoglandulae hepaticae|hepatic node,,,,UBERON:0015859,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,hepatic lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any of the lymph nodes adjacent to the stomach and duodenum.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0015857,parotid lymph node,parotid node,A lymph node found near the parotid gland.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Parotid_lymph_nodes|SCTID:279140007|MA:0003088|FMA:61216,,,,,,,,,,,,,,,,,,,,,,,,,parotid node,,,,UBERON:0015857,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,parotid lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A lymph node found near the parotid gland.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_38106,organosulfur heterocyclic compound,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:38106,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,organosulfur heterocyclic compound,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03500020,enamel surface for meat,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=N0020,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03500020,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,enamel surface for meat,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00003863,food processing building,,"A food processing building is a building in which materials that contain or consist of essential body nutrients - such as carbohydrates, fats, proteins, vitamins, or minerals - and may be ingested and assimilated by an organism to produce energy, stimulate growth, and maintain life are converted alternative forms.",FALSE,,,,,,,,,,,,,,The semantics of food are being handled by FOODON http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00003863,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,food processing building,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A food processing building is a building in which materials that contain or consist of essential body nutrients - such as carbohydrates, fats, proteins, vitamins, or minerals - and may be ingested and assimilated by an organism to produce energy, stimulate growth, and maintain life are converted alternative forms.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100014,international travel surveillance strategy,,A travel-associated surveillance strategy in which individuals are selected if they have a travel history outside of the reporting country in a specified number of days before onset of symptoms.,FALSE,,,,,,,International travel surveillance,,,,,,,,,,,,,,https://www.eurosurveillance.org/content/10.2807/1560-7917.ES.2020.25.37.2001641,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100014,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,international travel surveillance strategy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A travel-associated surveillance strategy in which individuals are selected if they have a travel history outside of the reporting country in a specified number of days before onset of symptoms.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100760,sampling site ID,sampling site ID,An identifier field which describes the user-defined identifier assigned to a specific location from which samples are taken.,FALSE,,,,,,,PCDS:sampling_site_id,,,,,,,"PCDS: Store the ID for the site from which a sample was taken. The 'site' is user defined; it may be a building and its environs, a specific entity within an environment. Please use the same site ID for all samples from a given site, regardless of when these samples were taken. Any important changes in site location, should be represented with a new site ID.",,,,,,,,,,,Drafted 2023-07-27,,,PCDS: Site 12A,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,sampling site ID,sampling site code|sampling site ID slot,,,,GENEPIO:0100760,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-20T20:25:24.926Z,,,,,,,,,,,,,,,,,,,sampling site ID,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://github.com/GenEpiO/genepio/issues/91,An identifier field which describes the user-defined identifier assigned to a specific location from which samples are taken.,,PCDS: The user-defined identifier assigned to a specific location from which samples are taken.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002223,bioinformatics analysis service,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002223,,,,,,,,,,,,,,2019-05-03T02:49:24Z,,,,,,,,,,,,,,,,,,,bioinformatics analysis service,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0009497,epithelium of foregut-midgut junction,,An epithelium that is part of a foregut-midgut junction.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,EMAPA:16564|EHDAA2:0000573,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0009497,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,epithelium of foregut-midgut junction,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An epithelium that is part of a foregut-midgut junction.,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0100192,liver failure,hepatic failure,A liver disease characterized by the liver losing or has lost all of its function.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0085605|NCIT:C26922|MESH:D017093|MEDGEN:88444,,,,,,,,,,,,,,,,,,,,,,,,,hepatic failure,,,,MONDO:0100192,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,,,,,,,,,liver failure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A liver disease characterized by the liver losing or has lost all of its function.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0009472,axilla,regio axillaris|axillary region|armpit|arm pit,The axilla is the area directly under the joint where the forelimb connects to the shoulder.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:Axilla|Wikipedia:Axilla|UMLS:C0004454|SCTID:362732006|NCIT:C12674|MESH:D001365|FMA:24864|EFO:0001395|CALOHA:TS-2208,,,,,,,,,,,,,,,,,,,,,,,,,regio axillaris|axillary region|armpit|arm pit,,,,UBERON:0009472,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,axilla,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The axilla is the area directly under the joint where the forelimb connects to the shoulder.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001967,metagenomic source,,Mixed material from metagenome.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI SRA: METAGENOMIC,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001967,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,metagenomic source,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,Mixed material from metagenome.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C166093,Biological Mother of Subject's Child,"MOTHER, BIOLOGICAL OF SUBJECT'S CHILD|Biological Mother of Subject's Child",The biological mother of the offspring of the male subject.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"MOTHER, BIOLOGICAL OF SUBJECT'S CHILD|Biological Mother of Subject's Child",,,,NCIT:C166093,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Biological Mother of Subject's Child,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The biological mother of the offspring of the male subject.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C166092,Biological Father of Subject's Child,"FATHER, BIOLOGICAL OF SUBJECT'S CHILD|Biological Father of Subject's Child",The biological father of the offspring of the female subject.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"FATHER, BIOLOGICAL OF SUBJECT'S CHILD|Biological Father of Subject's Child",,,,NCIT:C166092,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Biological Father of Subject's Child,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The biological father of the offspring of the female subject.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102274,prior pathogen infection status,,A data field which describes the absence or presence of a prior pathogen infection.,FALSE,,,,,,,PCDS:prior_infection,,,,,,,"PCDS: If known, provide information about whether the individual had a previous pathogen infection. Select a value from the pick list.",,,,,,,,,,,,,,PCDS: Prior infection,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102274,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2026-04-09T18:02:29.914Z,,,,,,,,,,,,,,,,,,,prior pathogen infection status,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the absence or presence of a prior pathogen infection.,,PCDS:The absence or presence of a prior pathogen infection.,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490310,varnished tin-plate container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0310,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490310,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,varnished tin-plate container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510227,food allergen labelling about coriander and products thereof,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0227,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510227,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food allergen labelling about coriander and products thereof,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0101072,sample collection start time,,A data field which describes the time at which sample collection began.,FALSE,,,,,,,PCDS:sample_collection_start_time,,,,,,,"PCDS: Provide this time in ISO 8601 24hr format, in your local time.",,,,,,,,,,,,,,PCDS: 17:15 PST,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0101072,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,sample collection start time,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the time at which sample collection began.,,PCDS: The time at which sample collection began.,,,,,,
http://purl.obolibrary.org/obo/OBI_0000181,population,,"a population is a collection of individuals from the same taxonomic class living, counted or sampled at a particular site or in a particular area",FALSE,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0001886,,,,,,,,,,,,,,rem1: collection somehow always involve a selection process,adapted from Oxford English Dictionnary,,,,"1/28/2013, BP, on the call it was raised that we may want to switch to an external ontology for all populatin terms: 
http://code.google.com/p/popcomm-ontology/",population,,PMID12564891. Environ Sci Technol. 2003 Jan 15;37(2):223-8. Effects of historic PCB exposures on the reproductive success of the Hudson River striped bass population.,,,http://purl.obolibrary.org/obo/IAO_0000125,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0000181,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,population,,,,,,,,,,,,,,,,,,,,,,,,,,,,PERSON: Philippe Rocca-Serra,,,,"a population is a collection of individuals from the same taxonomic class living, counted or sampled at a particular site or in a particular area",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100785,dissolved oxygen measurement method,dissolved oxygen measurement method,An environmental data field which describes the method used to measure dissolved oxygen.,FALSE,,,,,,,PCDS:dissolved_oxygen_measurement_method,,,,,,,PCDS: Provide the name of the procedure or technology used to measure dissolved oxygen.,,,,,,,,,,,,,,PCDS: Dissolved oxygen meter in vertical direction,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,dissolved oxygen measurement method,dissolved oxygen measurement method slot,,,,GENEPIO:0100785,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,dissolved oxygen measurement method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the method used to measure dissolved oxygen.,,PCDS: The method used to measure dissolved oxygen.,,,,,,
http://purl.obolibrary.org/obo/CHEBI_50954,diarsenes,,Compounds with structure RAs=AsR.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:50954,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,diarsenes,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Compounds with structure RAs=AsR.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C25709,Unit of Measure,unit(s)|Units|Unit(s)|Unit of Measurement|Unit of Measure|Unit|UOM|U,"A named quantity in terms of which other quantities are measured or specified, used as a standard measurement of like kinds.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,unit(s)|Units|Unit(s)|Unit of Measurement|Unit of Measure|Unit|UOM|U,,,,NCIT:C25709,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Unit of Measure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A named quantity in terms of which other quantities are measured or specified, used as a standard measurement of like kinds.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03304435,"beef (steak, freeze-dried)",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://bioregistry.io/reference/siren:F4435,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03304435,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"beef (steak, freeze-dried)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001113,INSDC country qualifier,,"The INSDC country qualifier is a textual controlled vocabulary used to indicate the country of origin of a DNA sample.  It can also have the following format: country:sub_region, such as: ""Canada:Vancouver"".",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001113,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,INSDC country qualifier,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/NCIT_C25464,,,,Damion Dooley,,,,"The INSDC country qualifier is a textual controlled vocabulary used to indicate the country of origin of a DNA sample.  It can also have the following format: country:sub_region, such as: ""Canada:Vancouver"".",,,help: Consult the http://www.insdc.org/country.html country list for valid options.,,,,,
http://purl.obolibrary.org/obo/CHEBI_33290,food,,"A physiological role played by any substance of either plant, animal or artificial origin which contains essential body nutrients that can be ingested by an organism to provide energy, promote growth, and maintain the processes of life.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:33290,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,food,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A physiological role played by any substance of either plant, animal or artificial origin which contains essential body nutrients that can be ingested by an organism to provide energy, promote growth, and maintain the processes of life.",,,,food role,,,,
http://purl.obolibrary.org/obo/PCO_0000035,party,,"A human social gathering in which the intention is to have a good time. Often the intention is to celebrate something like a birthday, anniversary, or holiday, but there is not always a purpose.",FALSE,,,,,,,,,,,,,,,,,,,,,GenEpiO curators,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PCO:0000035,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/pco.owl,,,,,,,,,party,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A human social gathering in which the intention is to have a good time. Often the intention is to celebrate something like a birthday, anniversary, or holiday, but there is not always a purpose.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000151,beef top sirloin roast,,A roast cut from the beef top sirloin.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000151,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef top sirloin roast,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A roast cut from the beef top sirloin.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0037998,external jugular lymph node,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:234382,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0037998,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,external jugular lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0037995,supramandibular lymph node,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:234376,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0037995,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,supramandibular lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00005502,vertebrate material,,Material which derives from one or more vertebrate animals.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00005502,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,vertebrate material,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Material which derives from one or more vertebrate animals.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000253,lamb leg,,A primal cut that comes from the area which extends from groin to ankle.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000253,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lamb leg,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A primal cut that comes from the area which extends from groin to ankle.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02021764,"pork chop (boneless, raw)",,A raw and boneless pork chop.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02021764,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"pork chop (boneless, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw and boneless pork chop.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530110,restaurant food preparation process,,The process of preparing and serving food in a restaurant.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0110,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530110,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,restaurant food preparation process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The process of preparing and serving food in a restaurant.,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_9689,Panthera leo,,,FALSE,,,,,,,lion,,,,,,,,,,,,,,,,,,,Panthera leo,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:9689,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Panthera leo,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_9685,Felis catus,,,FALSE,,,,,,,domestic cat|cats|cat,,,,,,,,,,,,,,,,,,,Felis catus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:9685,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Felis catus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_9688,Panthera,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,Panthera,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:9688,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Panthera,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_9681,Felidae,,,FALSE,,,,,,,cat family,,,,,,,,,,,,,,,,,,,Felidae,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:9681,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Felidae,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_02000896,State (Myanmar),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:02000896,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,State (Myanmar),http://purl.obolibrary.org/obo/GAZ_00006899,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C2991,Disease or Disorder,"disorder|disease_type|disease_term|disease type|disease term|disease|condition|Other Disease|Disorders|Disorder|Diseases and Disorders|Diseases|Disease or Disorder, Non-Neoplastic|Disease or Disorder|Disease|Diagnosis|Condition","Any abnormal condition of the body or mind that causes discomfort, dysfunction, or distress to the person affected or those in contact with the person. The term is often used broadly to include injuries, disabilities, syndromes, symptoms, deviant behaviors, and atypical variations of structure and function.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"disorder|disease_type|disease_term|disease type|disease term|disease|condition|Other Disease|Disorders|Disorder|Diseases and Disorders|Diseases|Disease or Disorder, Non-Neoplastic|Disease or Disorder|Disease|Diagnosis|Condition",,,,NCIT:C2991,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Disease or Disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Any abnormal condition of the body or mind that causes discomfort, dysfunction, or distress to the person affected or those in contact with the person. The term is often used broadly to include injuries, disabilities, syndromes, symptoms, deviant behaviors, and atypical variations of structure and function.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C2990,Digestive System Disorder,stomach or intestinal disorder|Unspecified Gastrointestinal Problem|Gastrointestinal System Disorder|Gastrointestinal System Disease|Gastrointestinal Disorder|GI Disorder|Disorder of Digestive System|Digestive System Disorder|Digestive System Disease|Digestive Disease,"A non-neoplastic or neoplastic disorder that affects the gastrointestinal tract, anus, liver, biliary system, and pancreas.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,stomach or intestinal disorder|Unspecified Gastrointestinal Problem|Gastrointestinal System Disorder|Gastrointestinal System Disease|Gastrointestinal Disorder|GI Disorder|Disorder of Digestive System|Digestive System Disorder|Digestive System Disease|Digestive Disease,,,,NCIT:C2990,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Digestive System Disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A non-neoplastic or neoplastic disorder that affects the gastrointestinal tract, anus, liver, biliary system, and pancreas.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100947,vertical grab sampling device,,"A grab sampler in which the container for the sample is mounted on the end of a rod, which is suitable for collecting waste from a tank.",FALSE,,,,,,,vertical grab sampler,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100947,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-11-20T16:24:25Z,,,,,,,,,,,,,,,,,,,vertical grab sampling device,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A grab sampler in which the container for the sample is mounted on the end of a rod, which is suitable for collecting waste from a tank.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100516,AMR testing susceptible breakpoint,antimicrobial resistance testing susceptible breakpoint|AMR_testing_susceptible_breakpoint|AMR testing susceptible breakpoint,An antimicrobial resistance (AMR) field which describes the maximum measurement for a sample to be considered “sensitive” to this antibiotic.,FALSE,,,,,,,PCDS:amr_testing_susceptible_breakpoint|PCDS:*_susceptible_breakpoint,,,,,,,"PCDS: This field should only contain a number (either an integer or a number with decimals), since the '<=' qualifier is implied.",,,,,,,,,,,Dependent on the units specified in the 'AMR measurement units field' [GENEPIO:0100523].,,,PCDS: 8,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,antimicrobial resistance testing susceptible breakpoint|AMR_testing_susceptible_breakpoint|AMR testing susceptible breakpoint,antimicrobial resistance testing susceptible breakpoint slot|antimicrobial resistance testing susceptible breakpoint field|AMR testing susceptible breakpoint slot,,,,GENEPIO:0100516,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-12-22T00:55:53.808Z,,,,,,,,,,,,,,,,,,,AMR testing susceptible breakpoint,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An antimicrobial resistance (AMR) field which describes the maximum measurement for a sample to be considered “sensitive” to this antibiotic.,,"PCDS: The maximum measurement, in the units specified in the ""AMR_measurement_units"" field, for a sample to be considered ""sensitive"" to this antibiotic",,,,,,
http://purl.obolibrary.org/obo/DOID_0050340,opportunistic bacterial infectious disease,,A bacterial infectious disease that results_in infection by bacteria in individuals whose host defense mechanisms have been compromised.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0050340,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,opportunistic bacterial infectious disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A bacterial infectious disease that results_in infection by bacteria in individuals whose host defense mechanisms have been compromised.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001910,decimal,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001910,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,decimal,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,^([+-]?[1-9]\d*|0)(\.\d+)?$,
http://purl.obolibrary.org/obo/HP_0011804,Abnormal muscle physiology,Issue with muscle function|Abnormality of muscle physiology,A functional abnormality of a skeletal muscle.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4023182,,,,,,,,,,,,,,,,,,,,,,,,,Issue with muscle function|Abnormality of muscle physiology,,,,HP:0011804,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal muscle physiology,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A functional abnormality of a skeletal muscle.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0011805,Abnormal skeletal muscle morphology,Issue with muscle structure|Abnormally shaped muscle|Abnormality of muscle morphology|Abnormal muscle morphology,A structural abnormality of a skeletal muscle.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4023181,,,,,,,,,,,,,,,,,,,,,,,HP:0003735,,Issue with muscle structure|Abnormally shaped muscle|Abnormality of muscle morphology|Abnormal muscle morphology,,,,HP:0011805,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal skeletal muscle morphology,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A structural abnormality of a skeletal muscle.,,,,,,,,
http://purl.obolibrary.org/obo/OMIT_0012450,Proteins,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OMIT:0012450,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/omit.owl,,,,,,,,,Proteins,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001970,synthetic source,,Synthetic DNA.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI SRA: SYNTHETIC,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001970,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,synthetic source,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,Synthetic DNA.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00002690,turkey breast,,A whole breast that is obtained from a turkey.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00002690,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,turkey breast,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A whole breast that is obtained from a turkey.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03308082,fish fillet (stuffed with crabmeat and shrimp),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://bioregistry.io/reference/siren:F8082,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03308082,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,fish fillet (stuffed with crabmeat and shrimp),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_131567,cellular organism,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,cellular organisms,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:131567,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl|http://purl.obolibrary.org/obo/cob.owl,,,,,,,,,cellular organisms|cellular organism,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001061,bus travel,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001061,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,bus travel,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00003064,drinking water,potable water,Drinking water is water which may be consumed by humans with no adverse effects on their health.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Drinking_water|SWEETRealm:DrinkingWater|EcoLexicon:drinking_water,,,,,,,,,,,,,,,,,,,,,,,,,potable water,,,,ENVO:00003064,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,drinking water,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Drinking water is water which may be consumed by humans with no adverse effects on their health.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001071,travel tour,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001071,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,travel tour,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UO_1010014,yard based unit,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:1010014,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,yard based unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UO_1010012,thou based unit,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:1010012,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,thou based unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UO_1010018,league based unit,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:1010018,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,league based unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UO_1010017,mile based unit,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:1010017,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,mile based unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UO_1010015,chain based unit,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:1010015,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,chain based unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UO_1010011,inch based unit,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:1010011,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,inch based unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UO_1010013,foot based unit,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:1010013,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,foot based unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UO_1010019,maritime length unit based unit,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:1010019,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,maritime length unit based unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UO_1010016,furlong based unit,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:1010016,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,furlong based unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_03501127,conference venue,conference centre|conference center,A building which accomodates conferences.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,conference centre|conference center,,,,ENVO:03501127,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,conference venue,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A building which accomodates conferences.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0004323,fluid from meat rinse,,A fluid that is obtained from rinsing meat for the purpose of collecting materials and organisms that are on its surface.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0004323,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135,2022-09-23T11:24:53Z,,,,,,,,,,,,,,,,,,,fluid from meat rinse,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A fluid that is obtained from rinsing meat for the purpose of collecting materials and organisms that are on its surface.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102156,PacBio Revio,,"A PacBio sequencing instrument model which utilises SPRQ chemistry to produce long-read sequencing using advanced single molecule real time (SMRT) technology (HiFi reads), with reduced material input compared to Sequel models.",FALSE,,,,,,,,,,,,,,,,,,,,,https://www.pacb.com/revio/,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102156,,,,,,,,,,,,,https://orcid.org/0000-0002-7654-6902|https://orcid.org/0000-0001-8008-8249,2025-03-21T01:14:47.111Z,,,,,,,,,,,,,,,,,,,PacBio Revio,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A PacBio sequencing instrument model which utilises SPRQ chemistry to produce long-read sequencing using advanced single molecule real time (SMRT) technology (HiFi reads), with reduced material input compared to Sequel models.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001583,multiisolate sample scope,,"A multiisolate sample scope contains multiple individuals that represent distinct specimen collections, a population (representative of a species).",FALSE,,,,,,,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/books/NBK54364/,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001583,,,,"This is often used for variation or phenotype and genotype studies. This should not be used when multiple genomes will be annotated. Eventually, multiple locus_tag prefixes will be able to be assigned to a single multiisolate genome sequencing project, but currently only a single prefix can be registered per project. Therefore, individual monoisolate projects need to be registered when more than one genome will be annotated.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,multiisolate sample scope,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"A multiisolate sample scope contains multiple individuals that represent distinct specimen collections, a population (representative of a species).",,,,multiisolate,,,,
http://purl.obolibrary.org/obo/FOODON_00004480,pork roast,,A retail cut of meat from a pork that is of a size for slicing into more than one portion and is suitable for roasting.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00004480,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pork roast,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A retail cut of meat from a pork that is of a size for slicing into more than one portion and is suitable for roasting.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C48191,Information,Information|Info,"Knowledge derived from study, experience, or instruction that has been gathered or received by communication.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Information|Info,,,,NCIT:C48191,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Information,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Knowledge derived from study, experience, or instruction that has been gathered or received by communication.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002044,MIC dilution measurement datum,,A MIC test measurement resulting from a laboratory dilution method.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Damion Dooley's note: is this still useful? Currently ""MIC dilution measurement specification' refers directly via 'is about' to ""broth dilution method"" but that may be too specific.",,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002044,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/NCIT_C128985,,,,,,MIC dilution measurement datum,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A MIC test measurement resulting from a laboratory dilution method.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00013569,"populated place, American Samoa",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00013569,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, American Samoa",http://purl.obolibrary.org/obo/GAZ_00003957,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://www.ebi.ac.uk/efo/EFO_0004920,progression free survival,time before disease progression,Progression free survival is a measurement from a defined time point e.g. diagnosis and indicates that the disease did not progress i.e. tumours did not increase in size and new incidences did not occur. PFS is usually used in analyzing results of treatment for advanced disease.,FALSE,,,,,,,,,,,,,,,,,,,,,http://cancerguide.org/scurve_basic.html,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,time before disease progression,,,,efo:EFO_0004920,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,progression free survival,,,,,,,,,,,,,,,,,,,,,,,,,,,,Helen Parkinson,,,,Progression free survival is a measurement from a defined time point e.g. diagnosis and indicates that the disease did not progress i.e. tumours did not increase in size and new incidences did not occur. PFS is usually used in analyzing results of treatment for advanced disease.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0100613,Death in early adulthood,Death in early adulthood,Death between the age of 16 and 40 years.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4022012,,,,,,,,,,,,,,,,,,,,,,,,,Death in early adulthood,,,,HP:0100613,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,Death in early adulthood,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Death between the age of 16 and 40 years.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_24533,heterodetic cyclic peptide,,"A heterodetic cyclic peptide is a peptide consisting only of amino-acid residues, but in which the linkages forming the ring are not solely peptide bonds; one or more is an isopeptide, disulfide, ester, or other bond.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:24533,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,heterodetic cyclic peptide,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A heterodetic cyclic peptide is a peptide consisting only of amino-acid residues, but in which the linkages forming the ring are not solely peptide bonds; one or more is an isopeptide, disulfide, ester, or other bond.",,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01001305,vegetated area,,A vegetated area is a geographic feature which has ground cover dominated by plant communities.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01001305,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,envoPolar,,,,,,,,vegetated area,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A vegetated area is a geographic feature which has ground cover dominated by plant communities.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C15248,Hemodialysis,Renal Dialysis|Kidney Dialysis|Hemodialysis|HEMODIALYSIS|Extracorporeal Dialysis|Artificial Kidney Dialysis,"A therapeutic procedure used in patients with kidney failure.  It involves the extracorporeal removal of harmful wastes and fluids from the blood using a dialysis machine.  Following the dialysis, the blood is returned to the body.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Renal Dialysis|Kidney Dialysis|Hemodialysis|HEMODIALYSIS|Extracorporeal Dialysis|Artificial Kidney Dialysis,,,,NCIT:C15248,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Hemodialysis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A therapeutic procedure used in patients with kidney failure.  It involves the extracorporeal removal of harmful wastes and fluids from the blood using a dialysis machine.  Following the dialysis, the blood is returned to the body.",,,,,,,,
http://purl.obolibrary.org/obo/OBI_0002750,Oxford Nanopore MinION,,"A portable DNA sequencer which is manufactured by the Oxford Nanopore Technologies corporation, that uses consumable flow cells producing up to 30 Gb of DNA sequence data per flow cell. The sequencer produces real-time results and utilizes nanopore technology with up to 512 nanopore channels in the sensor array.",FALSE,,,,,,,"ONT MinION, MinION",,,,,,,,,,,,,,https://nanoporetech.com/products/minion,,,,,Oxford Nanopore MinION,,Approaches to Whole Mitochondrial Genome Sequencing on the Oxford Nanopore MinION,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0002750,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Oxford Nanopore MinION,,,,,,,,,,,,,,,,,,,,,,,,,,,,PERSON: Bonita Lam,,,,"A portable DNA sequencer which is manufactured by the Oxford Nanopore Technologies corporation, that uses consumable flow cells producing up to 30 Gb of DNA sequence data per flow cell. The sequencer produces real-time results and utilizes nanopore technology with up to 512 nanopore channels in the sensor array.",,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000873,freshwater biome,,An aquatic biome which is determined by a body of freshwater.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SPIRE:Freshwater,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00000873,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,envoPolar,,,,,,,,freshwater biome,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An aquatic biome which is determined by a body of freshwater.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C13442,Anatomy Qualifier,Anatomy Qualifiers|Anatomy Qualifier|Anatomic Qualifier,An adjectival term used to specify a region of the body or other concepts associated with the body.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Anatomy Qualifiers|Anatomy Qualifier|Anatomic Qualifier,,,,NCIT:C13442,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Anatomy Qualifier,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An adjectival term used to specify a region of the body or other concepts associated with the body.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_25710,organophosphorus compound,,"An organophosphorus compound is formally a compound containing at least one carbon-phosphorus bond, but the term is often extended to include esters and thioesters.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:25710,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,organophosphorus compound,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An organophosphorus compound is formally a compound containing at least one carbon-phosphorus bond, but the term is often extended to include esters and thioesters.",,,,,,,,
http://purl.obolibrary.org/obo/OBI_0002049,Illumina HiSeq 4000,,"A DNA sequencer manufactured by Illumina corporation, with two flow cell and a throughput of more than 400 Gb per day.",FALSE,,,,,,,HiSeq 4000,,,,,,,,,,,,,,http://www.illumina.com/systems/hiseq-3000-4000.html,,,,,Illumina HiSeq 4000,,,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0002049,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Illumina HiSeq 4000,,,,,,,,,,,,,,,,,,,,,,,,,,,,"PERSON: Sagar Jain, Richard Scheuermann",,,,"A DNA sequencer manufactured by Illumina corporation, with two flow cell and a throughput of more than 400 Gb per day.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001918,millions,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001918,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0001915,,,,,,,,,,,millions,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03301077,fish (whole or pieces),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://bioregistry.io/reference/siren:F1077,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03301077,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,fish (whole or pieces),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_7370,Musca domestica,,,FALSE,,,,,,,house fly,,,,,,,,,,,,,,,,,,,Musca domestica,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:7370,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Musca domestica,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000091,beef chuck short rib (boneless),,A cut from beef chuck short rib that is an individual muscle and is boneless.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000091,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef chuck short rib (boneless),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A cut from beef chuck short rib that is an individual muscle and is boneless.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001003,less than or equal to,,"The ""less than or equal to"" comparator indicates that a given substance was present at less than or equal to a given quantity or concentration.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,<=,,,,,,GENEPIO:0001003,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,less than or equal to,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"The ""less than or equal to"" comparator indicates that a given substance was present at less than or equal to a given quantity or concentration.",,,,<=,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000159,epigenomics project,,"A sequencing project involving DNA methylation, histone modification, and/or chromatin accessibility datasets",FALSE,,,,,,,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/books/NBK54364/,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000159,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,epigenomics project,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"A sequencing project involving DNA methylation, histone modification, and/or chromatin accessibility datasets",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100005,baseline surveillance strategy,random sampling,A surveillance sampling strategy in which baseline is established at the beginning of a study or project by the selection of sample units via random sampling.,FALSE,,,,,,,Baseline surveillance (random sampling),,,,,,,"Such that each possible unit has a fixed and known or equal probability of selection. [Source: ""Random Sample"" (p.238) in Porta, M. (2014). A Dictionary of Epidemiology (6th ed.). Oxford University Press, Incorporated.]",,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,random sampling,,,,GENEPIO:0100005,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,baseline surveillance strategy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A surveillance sampling strategy in which baseline is established at the beginning of a study or project by the selection of sample units via random sampling.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000685,water mass,,A mass of water.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01000685,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,water mass,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A mass of water.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_25105,macrolide antibiotic,,A macrocyclic lactone with a ring of twelve or more members which exhibits antibiotic activity.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:25105,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,macrolide antibiotic,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A macrocyclic lactone with a ring of twelve or more members which exhibits antibiotic activity.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100191,animal rescue exposure process,,A process occuring within or in the vicinity of an animal rescue facility that exposes the recipient organism to a material entity.,FALSE,,,,,,,Animal Rescue,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100191,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,animal rescue exposure process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A process occuring within or in the vicinity of an animal rescue facility that exposes the recipient organism to a material entity.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0101025,water depth units,water depth units,An environmental data field which describes the units of measurement for water depth.,FALSE,,,,,,,PCDS:water_depth_units,,,,,,,PCDS: Provide the units of measurement for which the depth was recorded.,,,,,,,,,,,,,,PCDS: meter (m) [UO:0000008],,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,water depth units,water depth units slot,,,,GENEPIO:0101025,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-02-29T20:11:13.332Z,,,,,,,,,,,,,,,,,,,water depth units,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the units of measurement for water depth.,,PCDS: The units of measurement for water depth.,,,,,,
http://purl.obolibrary.org/obo/PR_000018263,amino acid chain,,An organic amino compound that consists of amino acid residues (unmodified amino-acid residues and/or modified amino-acid residues) linked by peptide bonds or derivatives of such bonds.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PR:000018263,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/cob.owl,,,,,,,,,amino acid chain,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An organic amino compound that consists of amino acid residues (unmodified amino-acid residues and/or modified amino-acid residues) linked by peptide bonds or derivatives of such bonds.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_38131,lactol,,Cyclic hemiacetals formed by intramolecular addition of a hydroxy group to an aldehydic or ketonic carbonyl group. They are thus 1-oxacycloalkan-2-ols or unsaturated analogues.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:38131,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,lactol,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Cyclic hemiacetals formed by intramolecular addition of a hydroxy group to an aldehydic or ketonic carbonyl group. They are thus 1-oxacycloalkan-2-ols or unsaturated analogues.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0001904,sequencing service,,A service provides sequencing service which is the realization of some sequencing such as RNA and DNA sequencing in which the service provider role is realized.,FALSE,,,,,,,,,,,,,,,,,,,,,Adpated from 'DNA sequencing service',,,,,sequencing service,,,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0001904,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,sequencing service,,,,,,,,,,,,,,,,,,,,,,,,,,,,Person: Jie Zheng,,,,A service provides sequencing service which is the realization of some sequencing such as RNA and DNA sequencing in which the service provider role is realized.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000969,cafeteria,,A building which provides the site for food services with little or no waiting staff furnishing table service.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01000969,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,cafeteria,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A building which provides the site for food services with little or no waiting staff furnishing table service.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490418,polyolefin textile container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0418,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490418,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,polyolefin textile container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001689,listeria antigen,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001689,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,listeria antigen,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/CHEBI_59132,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100011,vaccine escape surveillance strategy,,"A priority surveillance strategy in which individuals are monitored for investigation into vaccine escape, i.e., identifying variants that contain mutations that counteracted the immunity provided by vaccine(s) of interest.",FALSE,,,,,,,Vaccine escape surveillance,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100011,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,vaccine escape surveillance strategy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A priority surveillance strategy in which individuals are monitored for investigation into vaccine escape, i.e., identifying variants that contain mutations that counteracted the immunity provided by vaccine(s) of interest.",,,,,,,,
http://purl.obolibrary.org/obo/HP_0004408,Abnormality of the sense of smell,Smell defect|Abnormality of the sense of smell|Abnormality of olfaction|Abnormal sense of smell,An anomaly in the ability to perceive and distinguish scents (odors).,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4021655,,,,,,,,,,,,,,,,,,,,,,,HP:0004410,,Smell defect|Abnormality of the sense of smell|Abnormality of olfaction|Abnormal sense of smell,,,,HP:0004408,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,http://purl.oboInOwllibrary.org/oboInOwl/hp#hposlim_core,,,,,,,,Abnormality of the sense of smell,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An anomaly in the ability to perceive and distinguish scents (odors).,,,,,,,,
http://purl.obolibrary.org/obo/HP_0004409,Hyposmia,Sense of smell impaired|Decreased smell sensation,"A decreased sensitivity to odorants (that is, a decreased ability to perceive odors).",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C2364082|SNOMEDCT_US:83156004,,,,,,,,,,,,,,,,,,,,,,,,,Sense of smell impaired|Decreased smell sensation,,,,HP:0004409,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,http://purl.oboInOwllibrary.org/oboInOwl/hp#hposlim_core,,,,,,,,Hyposmia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A decreased sensitivity to odorants (that is, a decreased ability to perceive odors).",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001937,454 Genome Sequencer,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI SRA: 454 GS,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001937,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,454 Genome Sequencer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_35715,nitro compound,,"A compound having a nitro group, ‒NO<small><sub>2</sub></small> (free valence on nitrogen), which may be attached to carbon, nitrogen (as in nitramines), or oxygen (as in nitrates), among other elements (in the absence of specification, <em>C</em>-nitro compounds are usually implied).",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:35715,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,nitro compound,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A compound having a nitro group, ‒NO<small><sub>2</sub></small> (free valence on nitrogen), which may be attached to carbon, nitrogen (as in nitramines), or oxygen (as in nitrates), among other elements (in the absence of specification, <em>C</em>-nitro compounds are usually implied).",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_48844,roxithromycin,,Semisynthetic derivative of erythromycin A.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:48844,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,roxithromycin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Semisynthetic derivative of erythromycin A.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00002663,pig food product,,A food product that is derived from some pig.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00002663,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pig food product,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A food product that is derived from some pig.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C87913,Microbiology Specimen Origin,Microbiology Specimen Origin|MBLOC,A site where a microbiology specimen is collected.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Microbiology Specimen Origin|MBLOC,,,,NCIT:C87913,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Microbiology Specimen Origin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A site where a microbiology specimen is collected.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01001319,saline water body,saline body of water,A body of water which is primarily composed of saline water.,FALSE,,,,,,,,,,,,,,This class has its subclasses populated by inference.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,saline body of water,,,,ENVO:01001319,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,saline water body,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A body of water which is primarily composed of saline water.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_35689,tetrazoles,,An azole in which the five-membered heterocyclic aromatic skeleton contains four N atoms and one C atom.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:35689,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,tetrazoles,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An azole in which the five-membered heterocyclic aromatic skeleton contains four N atoms and one C atom.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02010313,animal roast (raw),,A raw animal roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02010313,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,animal roast (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw animal roast.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490330,"paper container, treated",,A paper container that has been treated with an antimicrobial agent or preservative chemical.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0330,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490330,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"paper container, treated",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A paper container that has been treated with an antimicrobial agent or preservative chemical.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_33560,p-block element atom,,Any main group element atom belonging to the p-block of the periodic table.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:33560,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,p-block element atom,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any main group element atom belonging to the p-block of the periodic table.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_1586,rheumatic fever,,"A connective tissue disease that develops from an antecedent Group A Streptococcal pharyngeal infection and has_symptom carditis, has_symptom polyarthritis, has_symptom chorea, has_symptom erythema marginatum, has_symptom subcutaneous nodules, has_symptom arthralgia, has_symptom prolonged PR interval, and/or has_symptom fever.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:1586,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,rheumatic fever,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A connective tissue disease that develops from an antecedent Group A Streptococcal pharyngeal infection and has_symptom carditis, has_symptom polyarthritis, has_symptom chorea, has_symptom erythema marginatum, has_symptom subcutaneous nodules, has_symptom arthralgia, has_symptom prolonged PR interval, and/or has_symptom fever.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001388,host health state,host health state,A host field which describes the health status of the host at the time of sample collection.,FALSE,,,,,,,PCDS:host_health_state,,,,,,,"PCDS: If known, select a value from the pick list.",,,,,,,,,,,,,,PCDS: Symptomatic,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,host health state,host health state slot,,,,GENEPIO:0001388,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,host health state,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A host field which describes the health status of the host at the time of sample collection.,,PCDS: Health status of the host at the time of sample collection.,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000324,pork picnic,,Forelimb from a shoulder.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000324,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pork picnic,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Forelimb from a shoulder.,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0003916,overnutrition,,"An imbalanced nutritional status resulting from excessive intake of nutrients. Generally, overnutrition generates an energy imbalance between food consumption and energy expenditure leading to disorders such as obesity.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C1257763|SCTID:302872003|MESH:D044343|MEDGEN:219760|ICD9:278.8|DOID:654,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MONDO:0003916,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,overnutrition,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An imbalanced nutritional status resulting from excessive intake of nutrients. Generally, overnutrition generates an energy imbalance between food consumption and energy expenditure leading to disorders such as obesity.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_45285,pyrazinecarboxamide,,"A monocarboxylic acid amide resulting from the formal condensation of the carboxy group of pyrazinoic acid (pyrazine-2-carboxylic acid) with ammonia. A prodrug for pyrazinoic acid, pyrazinecarboxamide is used as part of multidrug regimens for the treatment of tuberculosis.",FALSE,,,,,,,Pza,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:8656|CHEBI:45281,,,,,,CHEBI:45285,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,pyrazinecarboxamide,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A monocarboxylic acid amide resulting from the formal condensation of the carboxy group of pyrazinoic acid (pyrazine-2-carboxylic acid) with ammonia. A prodrug for pyrazinoic acid, pyrazinecarboxamide is used as part of multidrug regimens for the treatment of tuberculosis.",,,,pyrazinamide,,,,
http://purl.obolibrary.org/obo/FOODON_02010029,piece of animal (skinless),,A piece of animal that is skinless.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02010029,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of animal (skinless),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A piece of animal that is skinless.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100143,Oxford Nanopore PromethION,,"A DNA sequencer that is manufactured by the Oxford Nanopore Technologies corporation, capable of running up to 48 flow cells and producing up to 7.6 Tb of data per run. The sequencer produces real-time results and utilizes Nanopore technology, with each flow cell allowing up to 3,000 nanopores to be sequencing simultaneously.",FALSE,,,,,,,,,,,,,,,,,,,,,https://nanoporetech.com/products/sequence/promethion,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100143,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,Oxford Nanopore PromethION,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A DNA sequencer that is manufactured by the Oxford Nanopore Technologies corporation, capable of running up to 48 flow cells and producing up to 7.6 Tb of data per run. The sequencer produces real-time results and utilizes Nanopore technology, with each flow cell allowing up to 3,000 nanopores to be sequencing simultaneously.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C25182,Inpatient,Inpatient,A patient who is residing in the hospital where he is being treated.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Inpatient,,,,NCIT:C25182,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Inpatient,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A patient who is residing in the hospital where he is being treated.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001052,obsolete: petting zoo,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001052,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: petting zoo,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,http://purl.obolibrary.org/obo/ENVO_01000923,,,,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0000093,patient role,,a role which inheres in a person and is realized by the process of being under the care of a physician or health care provider,FALSE,,,,,,,patient,,,,,,,,,,,,,"CDISC definition:  patient. Person under a physician's care for a particular disease or condition. NOTE: A subject in a clinical trial is not necessarily a patient, but a patient in a clinical trial is a subject. See also subject, trial subject, healthy volunteer. Often used interchangeably","OBI, CDISC",,,,See also OMRSE:00000011 'patient role',patient role,,a hospitalized person; a person with controlled diabetes; the patient's role http://www.fertilityjourney.com/testingAndDiagnosis/theRightDoctor/thePatientsRole/index.asp?C=55245395146924652778,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0000093,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,patient role,,,,,,,,,,,,,,,,,,,,,,,,,,,,GROUP:Role Branch,,,,a role which inheres in a person and is realized by the process of being under the care of a physician or health care provider,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000028,subject body product,,"Substance produced by the body, e.g. stool, mucus, where the specimen was obtained from.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,"feces, cerebral spinal fluid (CSF)",,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000028,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,subject body product,,,,,Pathogen Isolate,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0002077,,,,,,,,Damion Dooley,,,,"Substance produced by the body, e.g. stool, mucus, where the specimen was obtained from.",,,,,,,,
http://purl.obolibrary.org/obo/HP_0000969,Edema,Soft tissue swelling,"An abnormal accumulation of fluid beneath the skin, or in one or more cavities of the body.",FALSE,,,,,,,,,,,,,,"Edema may be related to one or more of the following factors: 1) increased capillary hydrostatic pressure, 2) decreased osmotic pressure of plasma, 3) decreased tissue tension and lymphatic drainage, 4) increased osmotic pressure of tissue fluids, and 5) increased capillary permeability.",,,,,,,,,,,,,,,,,,UMLS:C0013604|SNOMEDCT_US:79654002|SNOMEDCT_US:423666004|SNOMEDCT_US:267038008|SNOMEDCT_US:20741006,,,,,,,,,,,,,,,,,,,,,,,HP:0000990,Soft tissue swelling,Water retention|Oedema|Hydrops|Fluid retention|Dropsy,,,,HP:0000969,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Edema,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An abnormal accumulation of fluid beneath the skin, or in one or more cavities of the body.",,,,,,,,
http://purl.obolibrary.org/obo/HP_0000961,Cyanosis,Blue discoloration of the skin,Bluish discoloration of the skin and mucosa due to poor circulation or inadequate oxygenation of arterial or capillary blood.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0010520|SNOMEDCT_US:3415004|SNOMEDCT_US:119419001,,,,,,,,,,,,,,,,,,,,,,,,,Blue discoloration of the skin,,,,HP:0000961,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Cyanosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Bluish discoloration of the skin and mucosa due to poor circulation or inadequate oxygenation of arterial or capillary blood.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0000964,Eczematoid dermatitis,Eczema,"Eczema is a form of dermatitis that is characterized by scaly, pruritic, erythematous lesions located on flexural surfaces.",FALSE,,,,,,,,,,,,,,"The term eczema is broadly applied to a range of persistent skin conditions and can be related to a number of underlying conditions. Manifestations of eczema can include dryness and recurring skin rashes with redness, skin edema, itching and dryness, crusting, flaking, blistering, cracking, oozing, or bleeding. Eczema has several forms including atopic dermatitis, contact dermatitis, dyshidrotic eczema, nummular eczema, seborrheic dermatitis, and stasis dermatitis.",,,,,,,,,,,,,,,,,,UMLS:C0013595|SNOMEDCT_US:43116000|SNOMEDCT_US:281104002,,,,,,,,,,,,,,,,,,,,,,,HP:0001481|HP:0000976,,Eczema,,,,HP:0000964,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Eczematoid dermatitis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Eczema is a form of dermatitis that is characterized by scaly, pruritic, erythematous lesions located on flexural surfaces.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100699,food product production stream,food_product_production_stream|food product production stream,"A production stream data field which describes a pathway incorporating the processes, material entities, and conditions that participate in the generation a food commodity.",FALSE,,,,,,,PCDS:food_product_production_stream,,,,,,,PCDS: Provide the name of the agricultural production stream from the picklist.,,,,,,,,,,,"Material entities examples: equipment, animals, locations",,,PCDS: Beef cattle production stream [FOODON:03000452],,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,food_product_production_stream|food product production stream,food product production stream slot,,,,GENEPIO:0100699,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-1107-9135,2023-05-18T05:09:29.167Z,,,,,,,,,,,,,,,,,,,food product production stream,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A production stream data field which describes a pathway incorporating the processes, material entities, and conditions that participate in the generation a food commodity.",,"PCDS: A production pathway incorporating the processes, material entities (i.e. equipment, animals, locations), and conditions that participate in the generation of a food commodity.",,,,,,
http://purl.obolibrary.org/obo/FOODON_02000346,veal leg,,A veal cut that is the portion of hindquarter remaining after the removal of loin.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000346,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,veal leg,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A veal cut that is the portion of hindquarter remaining after the removal of loin.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100211,physician's Office exposure process,,A process occuring within or in the vicinity of a physician's office that exposes the recipient organism to a material entity.,FALSE,,,,,,,Physician's Office,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100211,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,physician's Office exposure process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A process occuring within or in the vicinity of a physician's office that exposes the recipient organism to a material entity.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001462,consensus sequence filepath,consensus sequence filepath,A data field which describes the filepath of the consensus sequence file.,FALSE,,,,,,,PCDS:consensus_sequence_filepath,,,,,,,PCDS: Provide the filepath of the consensus sequence FASTA file.,,,,,,,,,,,,,,PCDS: /User/Documents/STILab/Data/mev123assembly.fasta,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,consensus sequence filepath,consensus sequence filepath slot,,,,GENEPIO:0001462,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,consensus sequence filepath,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the filepath of the consensus sequence file.,,PCDS: The filepath of the consensus sequence file.,,,,,,
http://purl.obolibrary.org/obo/UO_1000097,cubic centimeter based unit,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:1000097,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,cubic centimeter based unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UO_1000090,cubic centimeter per mole based unit,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:1000090,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,cubic centimeter per mole based unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UO_1000096,cubic meter based unit,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:1000096,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,cubic meter based unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UO_1000093,cubic meter per kilogram based unit,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:1000093,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,cubic meter per kilogram based unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UO_1000094,meter per second based unit,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:1000094,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,meter per second based unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UO_1000099,liter based unit,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:1000099,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,liter based unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0021117,lung neoplasm,tumour of the lung|tumour of lung|tumor of the lung|tumor of lung|neoplasm of the lung|neoplasm of lung|lung tumour|lung tumor|lung neoplasms|lung neoplasm (disease)|lung neoplasm,"A benign or malignant, primary or metastatic neoplasm involving the lungs. Representative examples of benign neoplasms include adenoma, papilloma, chondroma, and endobronchial lipoma. Representative examples of malignant neoplasms include carcinoma, carcinoid tumor, sarcoma, and lymphoma.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0024121|ONCOTREE:LUNG|NCIT:C3200|MESH:D008175|MEDGEN:7400,,,,,,,,,,,,,,,,,,,,,,,,,tumour of the lung|tumour of lung|tumor of the lung|tumor of lung|neoplasm of the lung|neoplasm of lung|lung tumour|lung tumor|lung neoplasms|lung neoplasm (disease)|lung neoplasm,,,,MONDO:0021117,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,lung neoplasm,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A benign or malignant, primary or metastatic neoplasm involving the lungs. Representative examples of benign neoplasms include adenoma, papilloma, chondroma, and endobronchial lipoma. Representative examples of malignant neoplasms include carcinoma, carcinoid tumor, sarcoma, and lymphoma.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100298,vaccination status,,A patient as host datum which indicates the vaccination status of the patient.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100298,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,vaccination status,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A patient as host datum which indicates the vaccination status of the patient.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0004921,Abnormal magnesium concentration,Abnormality of magnesium homeostasis|Abnormal Mg concentration,An abnormality of magnesium ion homeostasis.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4025274|UMLS:C4020826,,,,,,,,,,,,,,,,,,,,,,,HP:0008274,,Abnormality of magnesium homeostasis|Abnormal Mg concentration,,,,HP:0004921,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal magnesium concentration,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An abnormality of magnesium ion homeostasis.,,,,,,,,
http://purl.obolibrary.org/obo/ARO_3004723,gradient plate method,,A method to determine microbial susceptibility to antibiotics in which test bacteria is inoculated onto an agar plate that contains a concentration gradient of antibiotic. The minimum inhibitory concentration of antibiotic is assessed.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ARO:3004723,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/aro.owl,,,,,,,,,gradient plate method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A method to determine microbial susceptibility to antibiotics in which test bacteria is inoculated onto an agar plate that contains a concentration gradient of antibiotic. The minimum inhibitory concentration of antibiotic is assessed.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01001813,construction,,"A material entity which has been assembled through the intentional, instinctual, or deliberately programmed efforts of an organism or machine.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01001813,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,construction,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A material entity which has been assembled through the intentional, instinctual, or deliberately programmed efforts of an organism or machine.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C103245,Cryovial,Cryovial,A vial used to store specimens in a cryopreservative at very low temperatures.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Cryovial,,,,NCIT:C103245,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Cryovial,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A vial used to store specimens in a cryopreservative at very low temperatures.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000241,lamb shoulder blade,,A whole cut from the Shoulder. The cut location is the full length of the Scapula or blade bone and includes the muscle groups above and below the Scapula.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000241,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lamb shoulder blade,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A whole cut from the Shoulder. The cut location is the full length of the Scapula or blade bone and includes the muscle groups above and below the Scapula.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_26404,puromycins,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:26404,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,puromycins,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100225,temporary residence exposure process,,A process occuring within or in the vicinity of a temporary residence that exposes the recipient organism to a material entity.,FALSE,,,,,,,Temporary Residence,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100225,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,temporary residence exposure process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A process occuring within or in the vicinity of a temporary residence that exposes the recipient organism to a material entity.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000336,pork leg cap steak,,"A pork steak that is derived from the Top Leg, also known as an Inside Leg; the individual muscle Gracilis. It is the cap that covers the center portion of the Top Leg.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000336,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pork leg cap steak,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A pork steak that is derived from the Top Leg, also known as an Inside Leg; the individual muscle Gracilis. It is the cap that covers the center portion of the Top Leg.",,,,,,,,
http://purl.obolibrary.org/obo/ExO_0000002,exposure event,,An interaction between an exposure stressor and an exposure_receptor.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ExO:0000002,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ecto.owl,,,,,,,,,exposure event,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An interaction between an exposure stressor and an exposure_receptor.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002100,test drug maximum concentration,,This is the maximum concentration of a drug applied during an an assay.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002100,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,test drug maximum concentration,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,This is the maximum concentration of a drug applied during an an assay.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00005252,Territory (Pakistan),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00005252,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Territory (Pakistan),http://purl.obolibrary.org/obo/GAZ_00005246,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00005258,"populated place, Pakistan",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00005258,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Pakistan",http://purl.obolibrary.org/obo/GAZ_00005246,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C35755,Non-Neoplastic Respiratory System Disorder,Non-Neoplastic Respiratory System Disorder,"A non-neoplastic disorder that affects the respiratory system.  Representative examples include pneumonia, chronic obstructive pulmonary disease, pulmonary failure, tracheitis, and tracheal agenesis.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Non-Neoplastic Respiratory System Disorder,,,,NCIT:C35755,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Non-Neoplastic Respiratory System Disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A non-neoplastic disorder that affects the respiratory system.  Representative examples include pneumonia, chronic obstructive pulmonary disease, pulmonary failure, tracheitis, and tracheal agenesis.",,,,,,,,
http://purl.obolibrary.org/obo/HP_0012378,Fatigue,Tiredness|Tired|Fatigue,A subjective feeling of tiredness characterized by a lack of energy and motivation.,FALSE,,,,,,,,,,,,,,Fatigue is distinct from muscle weakness.,,,,,,,,,,,,,,,,,,UMLS:C0015672|SNOMEDCT_US:84229001|SNOMEDCT_US:248274002,,,,,,,,,,,,,,,,,,,,,,,,,Tiredness|Tired|Fatigue,,,,HP:0012378,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Fatigue,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A subjective feeling of tiredness characterized by a lack of energy and motivation.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0012372,Abnormal eye morphology,Abnormally shaped eye|Abnormality of the globe|Abnormal eye structure,"A structural anomaly of the globe of the eye, or bulbus oculi.",FALSE,,,,,,,,,,,,,,previously: Abnormal globe morphology,,,,,,,,,,,,,,,,,,UMLS:C4022925|Fyler:4863,,,,,,,,,,,,,,,,,,,,,,,HP:0012374|HP:0000489,,Abnormally shaped eye|Abnormality of the globe|Abnormal eye structure,,,,HP:0012372,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal eye morphology,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A structural anomaly of the globe of the eye, or bulbus oculi.",,,,,,,,
http://purl.obolibrary.org/obo/HP_0012373,Abnormal eye physiology,Abnormal vision physiology,A functional anomaly of the eye.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4022924,,,,,,,,,,,,,,,,,,,,,,,,Abnormal vision physiology,Abnormal eye physiology,,,,HP:0012373,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal eye physiology,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A functional anomaly of the eye.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510245,high omega-3 fatty acids,,"A claim that a food is high in omega-3 fatty acids, and any claim likely to have the same meaning for the consumer, may only be made where the product contains at least 0,6 g alpha-linolenic acid per 100 g and per 100 kcal, or at least 80 mg of the sum of eicosapentaenoic acid and docosahexaenoic acid per 100 g and per 100 kcal [COMMISSION REGULATION (EU) No 116/2010 of 9 February 2010 amending Regulation (EC) No 1924/2006 of the European Parliament and of the Council with regard to the list of nutrition claims].",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0245,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510245,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,high omega-3 fatty acids,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A claim that a food is high in omega-3 fatty acids, and any claim likely to have the same meaning for the consumer, may only be made where the product contains at least 0,6 g alpha-linolenic acid per 100 g and per 100 kcal, or at least 80 mg of the sum of eicosapentaenoic acid and docosahexaenoic acid per 100 g and per 100 kcal [COMMISSION REGULATION (EU) No 116/2010 of 9 February 2010 amending Regulation (EC) No 1924/2006 of the European Parliament and of the Council with regard to the list of nutrition claims].",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100263,personal care aid role,personal care aide role,A role inhering in a person that is realized when the bearer works to help another person complete their daily activities.,FALSE,,,,,,,Personal Care Aid,,,,,,,,,,,,,,"https://www.careerexplorer.com/careers/personal-care-aide/#:~:text=A%20personal%20care%20aide%20is,as%20in%2Dhome%20caretakers).",,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,personal care aide role,,,,GENEPIO:0100263,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,personal care aid role,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A role inhering in a person that is realized when the bearer works to help another person complete their daily activities.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490266,"ceramic or earthenware jar, coloured",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0266,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490266,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"ceramic or earthenware jar, coloured",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/OMIABIS_0001008,comorbidity,complications,A diagnosis that is the outcome of a diagnostic process targeting a second or additional health problem.,FALSE,,,,,,,,,,,,,,,,,,,,,amended from http://en.wikipedia.org/wiki/Comorbidity,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,NIAID: Comorbidity|http://purl.obolibrary.org/obo/GENEPIO_0002073,,,,,,,,,,,,,,,,,,,,,,,,,,complications,,,OMIABIS:0001008,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/obib.owl,,,,,,,,,comorbidity,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A diagnosis that is the outcome of a diagnostic process targeting a second or additional health problem.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100041,293/ACE2 cell line,293/hACE2 cell line,"293 cells stably expressing the SARS-CoV receptor protein, angiotensin-converting enzyme 2 (ACE2).",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,293/hACE2 cell line,,,,GENEPIO:0100041,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,293/ACE2 cell line,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"293 cells stably expressing the SARS-CoV receptor protein, angiotensin-converting enzyme 2 (ACE2).",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001223,environmental material field,environmental_material|environmental material,A data field which describes the substance obtained from the natural or man-made environment.,FALSE,,,,,,,PCDS:environmental_material,,,,,,,"PCDS: Environmental material answers what is collected and analyzed, and may be a material or a material‑bearing object. It represents the physical medium from which data are generated, distinct from the environmental site.",,,,,,,,,,,,,,PCDS: Air; Bandage; Face mask,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,environmental_material|environmental material,environmental_material,,,,GENEPIO:0001223,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,environmental material field,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://github.com/GenEpiO/genepio/issues/117,A data field which describes the substance obtained from the natural or man-made environment.,,PCDS: The material or material-bearing object collected from an environmental site.,,,,,,
http://purl.obolibrary.org/obo/HP_0002917,Hypomagnesemia,Low blood magnesium levels|Low blood Mg levels,An abnormally decreased magnesium concentration in the blood.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0151723|SNOMEDCT_US:190855004,,,,,,,,,,,,,,,,,,,,,,,HP:0003284,,Low blood magnesium levels|Low blood Mg levels,,,,HP:0002917,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Hypomagnesemia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An abnormally decreased magnesium concentration in the blood.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001579,obsolete: NCBI BioProject model,,The NCBI BioProject model includes all datums associated with the current NCBI BioProject specification.,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001579,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: NCBI BioProject model,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,http://purl.obolibrary.org/obo/GENEPIO_0001836,,,The NCBI BioProject model includes all datums associated with the current NCBI BioProject specification.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000142,beef tenderloin roast (raw),,A raw beef tenderloin roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000142,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef tenderloin roast (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef tenderloin roast.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0000571,manufacturer role,,Manufacturer role is a role which inheres in a person or organization and which is realized by a manufacturing process.,FALSE,,,,,,,,,,,,,,,,,,,,,OBI,,,,,manufacturer role,,"With respect to The Accuri C6 Flow Cytometer System, the organization Accuri bears the role manufacturer role.  With respect to a transformed line of tissue culture cells derived by a specific lab, the lab whose personnel isolated the cll line bears the role manufacturer role.  With respect to a specific antibody produced by an individual scientist, the scientist who purifies, characterizes and distributes the anitbody bears the role manufacturer role.",,,http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0000571,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,manufacturer role,,,,,,,,,,,,,,,,,,,,,,,,,,,,GROUP:  Role Branch,,,,Manufacturer role is a role which inheres in a person or organization and which is realized by a manufacturing process.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100104,mRNA extract,messenger RNA extract,An extract which is the output of an extraction process in which messenger RNA molecules are isolated from a specimen.,FALSE,,,,,,,mRNA (messenger RNA),,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,messenger RNA extract,,,,GENEPIO:0100104,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,mRNA extract,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An extract which is the output of an extraction process in which messenger RNA molecules are isolated from a specimen.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_38418,"1,3-thiazoles",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:38417|CHEBI:26949,,,,,,CHEBI:38418,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,"1,3-thiazoles",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0050035,African tick-bite fever,,"A spotted fever that has_material_basis_in Rickettsia africae, which is transmitted_by ticks (Amblyomma hebraeum and Amblyomma variegatum). The infection has_symptom fever, has_symptom eschar and has_symptom maculopapular rash.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0050035,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,African tick-bite fever,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A spotted fever that has_material_basis_in Rickettsia africae, which is transmitted_by ticks (Amblyomma hebraeum and Amblyomma variegatum). The infection has_symptom fever, has_symptom eschar and has_symptom maculopapular rash.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020234,"chicken breast (with skin, raw)",,A raw chicken breast that contains skin.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020234,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"chicken breast (with skin, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw chicken breast that contains skin.,,,,,,,,
http://purl.obolibrary.org/obo/ARO_3004299,antimicrobial phenotype,,"Qualitative description of a microbial response to antimicrobial agents and the expected clinical outcome. Bacteria may be susceptible or resistant to a broad range of antibiotic drugs or drug classes, with several intermediate states or phases.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ARO:3004299,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/aro.owl,,,http://purl.obolibrary.org/obo/IDO_0000581,,,,,,antimicrobial phenotype,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Qualitative description of a microbial response to antimicrobial agents and the expected clinical outcome. Bacteria may be susceptible or resistant to a broad range of antibiotic drugs or drug classes, with several intermediate states or phases.",,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000077,agricultural ecosystem,stockyard|sheepfold|pastoral site|nursery|irrigated field|grazing allotment|grange|feedlot|dairy|corral|cattle dipping tank|barn,"As with other classes that are ""features"", the subclasses of this class are being moved to more informative locations. Their relation to agriculture will be modelled by something more akin to a quality or relation to an agricultural process.",FALSE,,,,,,,,,,,,,,"As with other classes that are ""features"", the subclasses of this class are being moved to more informative locations. Their relation to agriculture will be modelled by something more akin to a quality or relation to an agricultural process.",,,,,,,,,,,,,,,,,,TGN:55001|Geonames:S.NSY|Geonames:L.RESA|Geonames:L.AGRC|FTT:74|FTT:72|FTT:64|FTT:63|FTT:62|FTT:60|FTT:57|FTT:52|FTT:51|FTT:50|FTT:48|FTT:46|FTT:45|FTT:44|FTT:1247|FTT:1246,,,,,,,,,,,,,,,,,,,,,,,,,,stockyard|sheepfold|pastoral site|nursery|irrigated field|grazing allotment|grange|feedlot|dairy|corral|cattle dipping tank|barn,,,ENVO:00000077,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,agricultural ecosystem,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102068,amplicon pcr primer scheme url,,PCDS: Provide the url of the primer scheme used to generate the amplicons for sequencing.,FALSE,,,,,,,PCDS:amplicon_pcr_primer_scheme_url,,,,,,,PCDS: Provide the url of the primer scheme used to generate the amplicons for sequencing.,,,,,,,,,,,,,,PCDS: https://github.com/artic-network/primer-schemes/tree/master/nCoV-2019/V1,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102068,,,,,,,,,,,,,,2026-04-13T17:16:47.336Z,,,,,,,,,,,,,,,,,,,amplicon pcr primer scheme url,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"PCDS: A URL linking to detailed information or documentation about the amplicon PCR primer scheme, including specifications such as primer sequences, binding positions, and fragment sizes. This URL should direct users to a source that provides the necessary details to reproduce or understand the primer scheme used in the dataset.",,,,,,
http://purl.obolibrary.org/obo/NCIT_C80234,Municipality,Municipality,"A political unit, such as a city, town, or village, incorporated for local self-government.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Municipality,,,,NCIT:C80234,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Municipality,,,,,,,,,,,,,,,,,,,,,,http://semanticscience.org/resource/SIO_000665,,,,,,,,,,"A political unit, such as a city, town, or village, incorporated for local self-government.",,,lookup:http://purl.obolibrary.org/obo/GAZ_00000448,,,,,
http://purl.obolibrary.org/obo/ENVO_03501218,toilet bowl,lavatory bowl,"A plumbing fixture which is bowl-shaped, part of a toilet fixture, and capable of contain human waste until it is disposed of.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,lavatory bowl,,,,ENVO:03501218,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,toilet bowl,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A plumbing fixture which is bowl-shaped, part of a toilet fixture, and capable of contain human waste until it is disposed of.",,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00008375,"populated place, Tajikistan",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00008375,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Tajikistan",http://purl.obolibrary.org/obo/GAZ_00006912,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00008372,Province (Tajikistan),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00008372,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Province (Tajikistan),http://purl.obolibrary.org/obo/GAZ_00006912,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C16326,Behavior,Conduct|Behavioral|Behavior|Attitude,"The actions or reactions of an object or organism, usually in relation to the environment or surrounding world of stimuli.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Conduct|Behavioral|Behavior|Attitude,,,,NCIT:C16326,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Behavior,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The actions or reactions of an object or organism, usually in relation to the environment or surrounding world of stimuli.",,,,,,,,
http://purl.obolibrary.org/obo/ENVO_06105101,plastic,Kunststoff,An environnmental material which 1) is composed primarily of polymers with high molecular mass and 2) once deformed does not spontaneously return to its original shape.,FALSE,,,,,,,,,,,,,,"""High molecular mass"" can be ambiguous as it does not set a threshold for what is considered ""high"". Here we make no commitment to a threshold.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,塑膠|plastica|Plastik,Kunststoff,,,ENVO:06105101,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,envoPlastics,,,,,,,,plastic,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environnmental material which 1) is composed primarily of polymers with high molecular mass and 2) once deformed does not spontaneously return to its original shape.,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_90371,Salmonella enterica subsp. enterica serovar Typhimurium,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,Salmonella enterica subsp. enterica serovar Typhimurium,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:90371,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Salmonella enterica subsp. enterica serovar Typhimurium,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GO_0051234,establishment of localization,establishment of localisation,"Any process that localizes a substance or cellular component. This may occur via movement, tethering or selective degradation.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,establishment of localisation,,,,GO:0051234,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/go.owl,http://purl.oboInOwllibrary.org/oboInOwl/go#goslim_pir|http://purl.oboInOwllibrary.org/oboInOwl/go#goslim_mouse|http://purl.oboInOwllibrary.org/oboInOwl/go#goslim_flybase_ribbon|http://purl.oboInOwllibrary.org/oboInOwl/go#goslim_agr|http://purl.oboInOwllibrary.org/oboInOwl/go#gocheck_do_not_annotate,,,,,,,,establishment of localization,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Any process that localizes a substance or cellular component. This may occur via movement, tethering or selective degradation.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470115,surface pasteurization or disinfection by ultraviolet irradiation,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0115,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470115,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,surface pasteurization or disinfection by ultraviolet irradiation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002171,listeria antigen specification,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002171,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,listeria antigen specification,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0001689,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020867,bison roast (raw),,A raw bison roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020867,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,bison roast (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw bison roast.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00002705,"populated place, Israel",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00002705,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Israel",http://purl.obolibrary.org/obo/GAZ_00002476,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/OGMS_0000045,disorder,,A material entity which is clinically abnormal and part of an extended organism. Disorders are the physical basis of disease.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OGMS:0000045,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ido.owl,,,,,,,,,disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A material entity which is clinically abnormal and part of an extended organism. Disorders are the physical basis of disease.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C80693,Bone Marrow Failure,Bone Marrow Failure,The inability of the bone marrow to produce hematopoietic elements.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Bone Marrow Failure,,,,NCIT:C80693,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Bone Marrow Failure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The inability of the bone marrow to produce hematopoietic elements.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0672,Pima in Mexico (HGDP),Pima,A population made up of 12 samples from Pima individuals recruited in Mexico as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Latin or Admixed American.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Pima,,,,HANCESTRO:0672,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Pima in Mexico (HGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 12 samples from Pima individuals recruited in Mexico as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Latin or Admixed American.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0671,Maya in Mexico (HGDP),Maya,A population made up of 21 samples from Maya individuals recruited in Mexico as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Latin or Admixed American.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Maya,,,,HANCESTRO:0671,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Maya in Mexico (HGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 21 samples from Maya individuals recruited in Mexico as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Latin or Admixed American.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0674,Chane in Argentina (SGDP),Chane,A population made up of 1 samples from Chane individuals recruited in Argentina as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Latin or Admixed American.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Chane,,,,HANCESTRO:0674,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Chane in Argentina (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 1 samples from Chane individuals recruited in Argentina as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Latin or Admixed American.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0677,Mixe in Mexico (SGDP),Mixe,A population made up of 3 samples from Mixe individuals recruited in Mexico as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Latin or Admixed American.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Mixe,,,,HANCESTRO:0677,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Mixe in Mexico (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 3 samples from Mixe individuals recruited in Mexico as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Latin or Admixed American.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0676,Mayan in Mexico (SGDP),Mayan,A population made up of 2 samples from Mayan individuals recruited in Mexico as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Latin or Admixed American.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Mayan,,,,HANCESTRO:0676,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Mayan in Mexico (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Mayan individuals recruited in Mexico as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Latin or Admixed American.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0670,Karitiana in Brazil (HGDP),Karitiana,A population made up of 9 samples from Karitiana individuals recruited in Brazil as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Latin or Admixed American.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Karitiana,,,,HANCESTRO:0670,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Karitiana in Brazil (HGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 9 samples from Karitiana individuals recruited in Brazil as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Latin or Admixed American.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0673,Surui in Brazil (HGDP),Surui,A population made up of 6 samples from Surui individuals recruited in Brazil as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Latin or Admixed American.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Surui,,,,HANCESTRO:0673,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Surui in Brazil (HGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 6 samples from Surui individuals recruited in Brazil as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Latin or Admixed American.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0679,Piapoco in Colombia (SGDP),Piapoco,A population made up of 2 samples from Piapoco individuals recruited in Colombia as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Latin or Admixed American.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Piapoco,,,,HANCESTRO:0679,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Piapoco in Colombia (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Piapoco individuals recruited in Colombia as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Latin or Admixed American.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0678,Mixtec in Mexico (SGDP),Mixtec,A population made up of 2 samples from Mixtec individuals recruited in Mexico as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Latin or Admixed American.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Mixtec,,,,HANCESTRO:0678,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Mixtec in Mexico (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Mixtec individuals recruited in Mexico as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Latin or Admixed American.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0675,Karitiana in Brazil (SGDP),Karitiana,A population made up of 3 samples from Karitiana individuals recruited in Brazil as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Latin or Admixed American.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Karitiana,,,,HANCESTRO:0675,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Karitiana in Brazil (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 3 samples from Karitiana individuals recruited in Brazil as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Latin or Admixed American.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0100651,Type I diabetes mellitus,Type I diabetes|Type 1 diabetes|Juvenile diabetes mellitus|Diabetes mellitus Type I,A chronic condition in which the pancreas produces little or no insulin. Type I diabetes mellitus is manifested by the sudden onset of severe hyperglycemia with rapid progression to diabetic ketoacidosis unless treated with insulin.,FALSE,,,,,,,,,,,,,,"The onset of type 1 diabetes is typically during adolescence, but it can develop at any age.",,,,,,,,,,,,,,,,,,UMLS:C0011854|SNOMEDCT_US:46635009,,,,,,,,,,,,,,,,,,,,,,,,,Type I diabetes|Type 1 diabetes|Juvenile diabetes mellitus|Diabetes mellitus Type I,,,,HP:0100651,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Type I diabetes mellitus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A chronic condition in which the pancreas produces little or no insulin. Type I diabetes mellitus is manifested by the sudden onset of severe hyperglycemia with rapid progression to diabetic ketoacidosis unless treated with insulin.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0100659,Abnormal cerebral vascular morphology,Abnormality of the cerebral vasculature|Abnormality of the cerebral blood vessels,An anomaly of the cerebral blood vessels.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4022001,,,,,,,,,,,,,,,,,,,,,,,,,Abnormality of the cerebral vasculature|Abnormality of the cerebral blood vessels,,,,HP:0100659,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal cerebral vascular morphology,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An anomaly of the cerebral blood vessels.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000137,beef tenderloin steak (bone-in),,A beef tenderloin steak with bone.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000137,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef tenderloin steak (bone-in),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A beef tenderloin steak with bone.,,,,,,,,
http://purl.obolibrary.org/obo/PATO_0000047,biological sex,,An organismal quality inhering in a bearer by virtue of the bearer's ability to undergo sexual reproduction in order to differentiate the individuals or types involved.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PATO:0000047,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/pato.owl,http://purl.oboInOwllibrary.org/oboInOwl/pato#attribute_slim,,,,,,,,biological sex,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An organismal quality inhering in a bearer by virtue of the bearer's ability to undergo sexual reproduction in order to differentiate the individuals or types involved.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001952,MF method,,Methyl Filtrated,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI SRA: MF,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001952,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MF method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Methyl Filtrated,,,,,,,,
http://semanticscience.org/resource/SIO_000546,collection of points,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,resource:SIO_000546,,,,,,,,,,,,,,,,,,,,,,,,http://semanticscience.org/resource/SIO_000546,,,,,,,,,collection of points,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000676,number density,,"A ratio in which the numerator represents a count and the denominator represents an interval of space (distance, area, or volume).",FALSE,,,,,,,,,,,,,,,,,,,,,SEVCO group,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000676,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,number density,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Brian S. Alper, Joanne Dehnbostel, Muhammad Afzal, Kenneth Wilkins, Harold Lehmann",,,,"A ratio in which the numerator represents a count and the denominator represents an interval of space (distance, area, or volume).",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000048,PFGE secondary test,,Second PFGE pattern from given diagnostic restriction enzyme,FALSE,,,,,,,,,,,,,,,,,,,,,GROUP: IRIDA Ontology (Emma),,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000048,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,,,,,,,PFGE secondary test,,,,,Lab Analytic,,,,,,,,,,,,,,,,,,,,,,Host Secondary PFGE Pattern,,,NML LIMS,,Second PFGE pattern from given diagnostic restriction enzyme,,,,,,,,
http://purl.obolibrary.org/obo/ARO_3004419,chromogenic cephalosporinase test,,Assay for beta lactamase detection.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ARO:3004419,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/aro.owl,,,,,,,,,chromogenic cephalosporinase test,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Assay for beta lactamase detection.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_4378,peanut allergy,,A legume allergy that is an allergy or hypersensitivity to dietary substances from peanuts causing an overreaction of the immune system which in a small percentage of people may lead to severe physical symptoms.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:4378,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,peanut allergy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A legume allergy that is an allergy or hypersensitivity to dietary substances from peanuts causing an overreaction of the immune system which in a small percentage of people may lead to severe physical symptoms.,,,,,,,,
http://purl.obolibrary.org/obo/COB_0000026,processed material entity,,A material entity processed by human activity with an intent to produce it.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,COB:0000026,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/cob.owl,,,,,,,,,processed material entity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A material entity processed by human activity with an intent to produce it.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002065,obsolete: German Institute for Standardization (DIN),,DIN is recognized by the Federal Government of Germany as the competent standards organization for Germany and as the national standards body representing Germany in non-governmental international standards organizations.,TRUE,,,,,,,,,,,,,,,,,,,,,http://www.din.de/en/din-and-our-partners/din-e-v,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DIN,,,,,,GENEPIO:0002065,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: German Institute for Standardization (DIN)|obsolete: Deutsches Institut für Normung,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,http://purl.obolibrary.org/obo/ARO_3004367,,,DIN is recognized by the Federal Government of Germany as the competent standards organization for Germany and as the national standards body representing Germany in non-governmental international standards organizations.,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0044348,hemoglobinopathy,hemoglobinopathy,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0019045|SCTID:80141007|MEDGEN:42400|ICD9:282.7,,,,,,,,,,,,,,,,,,,,,,,,,hemoglobinopathy,,,,MONDO:0044348,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,hemoglobinopathy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000281,layer,,"A material entity which 1) is spatially continuous, 2) is composed of material of comparable thickness, composition, and physical properties, and 3) is physically distinct from adjacent portions of environmental material.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01000281,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,envoPolar,,,,,,,,layer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A material entity which 1) is spatially continuous, 2) is composed of material of comparable thickness, composition, and physical properties, and 3) is physically distinct from adjacent portions of environmental material.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_17658,tylosin,,A macrolide antibiotic that is tylonolide having mono- and diglycosyl moieties attached to two of its hydroxy groups. It is found naturally as a fermentation product of <em>Streptomyces fradiae</em>.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:9787|CHEBI:46150|CHEBI:27172|CHEBI:15275,,,,,,CHEBI:17658,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,tylosin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A macrolide antibiotic that is tylonolide having mono- and diglycosyl moieties attached to two of its hydroxy groups. It is found naturally as a fermentation product of <em>Streptomyces fradiae</em>.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000094,assembly name (identifier),,Name/version of the assembly provided by the submitter that is used in the genome browsers and in the community,FALSE,,,,,,,,,,,,,,,,,,,,,GROUP: MIxS,,,,,,,name and version of assemby,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000094,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,http://purl.obolibrary.org/obo/SO_0000353,,,,,,assembly name (identifier),,,,,Assembly QC,,,,,,,,,,,,,,,,,,,,,,Assembly name,,,Standard Term,,Name/version of the assembly provided by the submitter that is used in the genome browsers and in the community,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000167,beef petite sirloin steak,,A small-sized sirloin steak.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000167,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef petite sirloin steak,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A small-sized sirloin steak.,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_9615,Canis lupus familiaris,,,FALSE,,,,,,,dogs|dog,,,,,,,,,,,,,,,,,,,Canis lupus familiaris,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:9615,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Canis lupus familiaris,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03460779,molybdenum added claim,,A claim that molybdenum has been added to an edible product.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=H0779,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03460779,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,molybdenum added claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A claim that molybdenum has been added to an edible product.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490324,butyrate cellulose film,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0324,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490324,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,butyrate cellulose film,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000366,veal shoulder,,A veal primal cut that is the upper foreleg extending from elbow to blade bone.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000366,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,veal shoulder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A veal primal cut that is the upper foreleg extending from elbow to blade bone.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001267,plant rinse,,Plant rinse is a rinse derived from plant material from one or more plants.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001267,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,plant rinse,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,Plant rinse is a rinse derived from plant material from one or more plants.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0001824,Weight loss,Loss of weight,Reduction of total body weight.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C1262477|SNOMEDCT_US:89362005|SNOMEDCT_US:262285001|SNOMEDCT_US:161832001,,,,,,,,,,,,,,,,,,,,,,,,,Loss of weight,,,,HP:0001824,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Weight loss,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Reduction of total body weight.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_02000022,excreta material,,"A bodily fluid material which is composed primarily of excreta, bodily fluids consisting of matter which contains the waste products of biological processes, including urine or feces, discharged from an organism's body.",FALSE,,,,,,,,,,,,,,"ENVO bodily fluid classes differ from UBERON's treatment of bodily fluids. UBERON refers to the substance itself (""S""). We assert that UBERON's classes are the primary compositional component of the terms in ENVO (""S material""). Use of the ENVO terms is typically recommended when you wish to indicate that there may be other materials intermixed with S.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:02000022,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,excreta material,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A bodily fluid material which is composed primarily of excreta, bodily fluids consisting of matter which contains the waste products of biological processes, including urine or feces, discharged from an organism's body.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001823,FTT,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001823,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FTT,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000049,beef chuck tender steak (raw),,A raw beef chuck tender steak.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000049,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef chuck tender steak (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef chuck tender steak.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00003096,West Region,,A census region in the United States of America,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00003096,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,West Region,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A census region in the United States of America,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00003093,Midwest Region,,A census region in the United States of America,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00003093,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Midwest Region,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A census region in the United States of America,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00003092,Region (contiguous United States of America),,Census Regions and Divisions are groupings of States that subdivide the United States.,FALSE,,,,,,,,,,,,,,,,,,,,,United States Census Bureau,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00003092,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Region (contiguous United States of America),http://purl.obolibrary.org/obo/GAZ_00003937,,,,,,,,,,,,,,,,,,,,,http://www.census.gov/econ/census/help/geography/regions_and_divisions.html,,,,,,Damion Dooley,,,,Census Regions and Divisions are groupings of States that subdivide the United States.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00003094,South Region,,A census region in the United States of America,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00003094,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,South Region,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A census region in the United States of America,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00003095,Northeast Region,,A census region in the United States of America,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00003095,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Northeast Region,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A census region in the United States of America,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100793,carbonaceous biochemical oxygen demand cbod measurement method,carbonaceous biochemical oxygen demand (CBOD) measurement method,An environmental data field which describes the method used to measure carbonaceous biochemical oxygen demand (CBOD).,FALSE,,,,,,,PCDS:carbonaceous_biochemical_oxygen_demand_cbod_measurement_method,,,,,,,PCDS: Provide the units of the measured CBOD by selecting a value from the pick list.,,,,,,,,,,,,,,PCDS: milligram per liter (mg/L),,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,carbonaceous biochemical oxygen demand (CBOD) measurement method,carbonaceous biochemical oxygen demand (CBOD) measurement method slot,,,,GENEPIO:0100793,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,carbonaceous biochemical oxygen demand cbod measurement method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the method used to measure carbonaceous biochemical oxygen demand (CBOD).,,PCDS: The units of a measurement of carbonaceous biochemical oxygen demand (CBOD).,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490111,"laminate tube, ends lined with cork",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0111,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490111,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"laminate tube, ends lined with cork",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000068,beef denver roast (raw),,A beef denver roast that is raw.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000068,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef denver roast (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A beef denver roast that is raw.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_02000610,Papua Province,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:02000610,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Papua Province,http://purl.obolibrary.org/obo/GAZ_00005200,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0050141,intestinal botulism,,"A botulism that involves intoxication caused by botulinum neurotoxins (BoNTA, B, E and F) in adults, has_material_basis_in Clostridium botulinum A, has_material_basis_in Clostridium botulinum B, has_material_basis_in Clostridium botulinum E and has_material_basis_in Clostridium botulinum F, which are transmitted by ingestion of bacterial spores, which then grow in the intestine and release toxins.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0050141,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,intestinal botulism,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A botulism that involves intoxication caused by botulinum neurotoxins (BoNTA, B, E and F) in adults, has_material_basis_in Clostridium botulinum A, has_material_basis_in Clostridium botulinum B, has_material_basis_in Clostridium botulinum E and has_material_basis_in Clostridium botulinum F, which are transmitted by ingestion of bacterial spores, which then grow in the intestine and release toxins.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001186,infectious disease treatment,,A course of treatment designed to resolve an infectious disease,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001186,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,infectious disease treatment,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A course of treatment designed to resolve an infectious disease,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470135,pasteurization by heating,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0135,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470135,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pasteurization by heating,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00003393,aquaculture closed containment pen rearing,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00003393,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,aquaculture closed containment pen rearing,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000152,beef top sirloin roast (raw),,A raw beef top sirloin roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000152,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef top sirloin roast (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef top sirloin roast.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_4974,actinobacillosis,,"A commensal bacterial infectious disease that results_in infection, has_material_basis_in Actinobacillus ureae, which is a commensal of the human respiratory tract. The pathogen causes meningitis, endocarditis, bacteremia, atrophic rhinitis, bronchitis, pneumonia, conjunctivitis, peritonitis, and otitis media.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:4974,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,actinobacillosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A commensal bacterial infectious disease that results_in infection, has_material_basis_in Actinobacillus ureae, which is a commensal of the human respiratory tract. The pathogen causes meningitis, endocarditis, bacteremia, atrophic rhinitis, bronchitis, pneumonia, conjunctivitis, peritonitis, and otitis media.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100781,ph measurement method,pH measurement method,An environmental data field which describes the process used to measure pH value.,FALSE,,,,,,,PCDS:ph_measurement_method,,,,,,,PCDS: Provide the name of the procedure or technology used to measure pH.,,,,,,,,,,,,,,PCDS: pH test strip (litmus test),,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,pH measurement method,pH measurement method slot,,,,GENEPIO:0100781,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,ph measurement method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the process used to measure pH value.,,PCDS: The process used to measure pH value.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100138,Ion Torrent S5 XL,,A DNA sequencer manufactured by the Ion Torrent corporation which utilizes Ion semiconductor sequencing and requires only a small amount of input material while producing data faster than the S5 model.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100138,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,Ion Torrent S5 XL,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A DNA sequencer manufactured by the Ion Torrent corporation which utilizes Ion semiconductor sequencing and requires only a small amount of input material while producing data faster than the S5 model.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0002793,scrubs,,"A personal protective clothing item which is sterilized and which is worn by a health care professional.  It can reference a shirt and pants or dress, and depending on medical protocol, may include a medical cap.",FALSE,,,,,,,scrub clothing item,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Scrubs_(clothing),,,,,scrubs,,"Examples consist of a short-sleeve V-necked shirt and drawstring pants or a short-sleeve calf-length dress, a tie-back or bouffant-style cap, a mask, a surgical gown, latex gloves, and supportive closed-toe shoes.",,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0002793,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,scrubs,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://orcid.org/0000-0002-8844-9165,,,https://github.com/obi-ontology/obi/issues/1193,"A personal protective clothing item which is sterilized and which is worn by a health care professional.  It can reference a shirt and pants or dress, and depending on medical protocol, may include a medical cap.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038897,superior tracheobronchial lymph node,station 4 lymph node|station 4 N2 lymph node|nodus tracheobronchiale superiore lymphaticus|lower paratracheal lymph node|4R+L thoracic lymph node|4 thoracic lymph node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:5959,,,,,,,,,,,,,,,,,,,,,,,,,station 4 lymph node|station 4 N2 lymph node|nodus tracheobronchiale superiore lymphaticus|lower paratracheal lymph node|4R+L thoracic lymph node|4 thoracic lymph node,,,,UBERON:0038897,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,superior tracheobronchial lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038894,paratracheal lymph node,tracheal lymph node|paratracheal node|nodus paratracheale lymphaticus|cervical paratracheal lymph node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:5953,,,,,,,,,,,,,,,,,,,,,,,,,tracheal lymph node|paratracheal node|nodus paratracheale lymphaticus|cervical paratracheal lymph node,,,,UBERON:0038894,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,paratracheal lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://www.w3.org/2006/vcard/ns#Address,address,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Address,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/arg/isf-dev.owl,,,,,,,,,address,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_03501109,subway train,metropolitana|Underground|U-Bahn|Tube|SkyTrain|London Underground,A passenger train which runs along an undergroud rail system.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,underground train|tube train|subway,metropolitana|Underground|U-Bahn|Tube|SkyTrain|London Underground,,,ENVO:03501109,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,subway train,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A passenger train which runs along an undergroud rail system.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_552,pneumonia,,"A lung disease that involves lung parenchyma or alveolar inflammation and abnormal alveolar filling with fluid (consolidation and exudation). It results from a variety of causes including infection with bacteria, viruses, fungi or parasites, and chemical or physical injury to the lungs. It is accompanied by fever, chills, cough, and difficulty in breathing.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:552,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,pneumonia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A lung disease that involves lung parenchyma or alveolar inflammation and abnormal alveolar filling with fluid (consolidation and exudation). It results from a variety of causes including infection with bacteria, viruses, fungi or parasites, and chemical or physical injury to the lungs. It is accompanied by fever, chills, cough, and difficulty in breathing.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_557,kidney disease,,A urinary system disease that is located_in the kidney.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:557,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,kidney disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A urinary system disease that is located_in the kidney.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0598,Singaporean Indian,,Includes individuals who either self-report or have been described by authors as Singaporean Indian.,FALSE,,,,,,,,,,,,,,,,,,,,,PMID:31626772|PMID:19700652,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0598,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Singaporean Indian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Includes individuals who either self-report or have been described by authors as Singaporean Indian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0590,European American,White|Non-Hispanic White|Caucasian|American of European ancestry,Individuals who self-identify or are reported by authors as European American. Term used by some communities to describe themselves and some US and UK government and other institutions on official forms used to collect demographic information.,FALSE,,,,,,,,,,,,,,"It should be noted that the synonym ""Caucasian"", while widely used in some part of the world, has strong associations with notions of white supremancy and should be avoided whenever possible.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,White|Non-Hispanic White|Caucasian|American of European ancestry,,,,HANCESTRO:0590,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,European American,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Individuals who self-identify or are reported by authors as European American. Term used by some communities to describe themselves and some US and UK government and other institutions on official forms used to collect demographic information.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0597,Singaporean Malay,,Includes individuals who either self-report or have been described by authors as Singaporean Malay.,FALSE,,,,,,,,,,,,,,,,,,,,,PMID:31626772|PMID:19700652,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0597,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Singaporean Malay,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Includes individuals who either self-report or have been described by authors as Singaporean Malay.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0596,Arab,,Includes individuals with ethnic origins in the Semitic people populating the Arabian Peninsula and other countries in the Middle East and Northern Africa,FALSE,,,,,,,,,,,,,,,,,,,,,PMID:28106113|PMID:27393651,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0596,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Arab,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Includes individuals with ethnic origins in the Semitic people populating the Arabian Peninsula and other countries in the Middle East and Northern Africa,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0595,Inuit,,"Native people residing in the Arctic of Alaska, northern Canada, Greenland, or eastern Siberia",FALSE,,,,,,,,,,,,,,"Class previously labelled as ""Eskimo"", which is outdated and culturally inappropriate. Outdated label may be added as an appropriately flagged synonym at a later stage.",,,,,,,PMID:29220501|PMID:25884279,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0595,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Inuit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Native people residing in the Arctic of Alaska, northern Canada, Greenland, or eastern Siberia",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100767,sample collection duration unit,,A data field which describes the unit of the time duration measurement of sample collection.,FALSE,,,,,,,PCDS:sample_collection_time_duration_unit,,,,,,,PCDS: Provide the units from the pick list.,,,,,,,A data field which describes the unit of the time duration measurement of sample collection.,,,,,,,PCDS: Hour,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100767,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-21T01:14:47.111Z,,,,,,,,,,,,,,,,,,,sample collection duration unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the unit of the time duration measurement of sample collection.,,PCDS: The units of the time duration measurement of sample collection.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0101015,sample storage duration unit,sample storage duration unit,A data field which describes the units of a measured sample storage duration.,FALSE,,,,,,,PCDS:sample_storage_duration_unit,,,,,,,PCDS: Provide the units from the pick list.,,,,,,,,,,,,,,PCDS: Day,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,sample storage duration unit,sample storage duration unit slot,,,,GENEPIO:0101015,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-21T01:14:47.111Z,,,,,,,,,,,,,,,,,,,sample storage duration unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the units of a measured sample storage duration.,,PCDS: The units of a measured sample storage duration.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000105,obsolete: MIxS data item,,A MixS data item is a term or field defined in the Genomic Standards Consortium MIxS standard.,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000105,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: MIxS data item,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,http://purl.obolibrary.org/obo/GENEPIO_0000003,,,A MixS data item is a term or field defined in the Genomic Standards Consortium MIxS standard.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001468,diagnosis record,,"Issue: a diagnosis is a set of diseases, each of which can be marked primary or secondary ""Illness causality"" with respect to a particular case?  Requires a relation annotation.",FALSE,,,,,,,,,,,,,,"Issue: a diagnosis is a set of diseases, each of which can be marked primary or secondary ""Illness causality"" with respect to a particular case?  Requires a relation annotation.",,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001468,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,diagnosis record,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0035612,nasal turbinal,turbinate|turbinal|nasal turbinate|nasal turbinal element|nasal turbinal,A skeletal element of the ethmoid region with complex morphology that are lined with mucuous membranes involved in either olfaction or air conditioning.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,turbinate|turbinal|nasal turbinate|nasal turbinal element|nasal turbinal,,,,UBERON:0035612,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,nasal turbinal,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A skeletal element of the ethmoid region with complex morphology that are lined with mucuous membranes involved in either olfaction or air conditioning.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0011097,Epileptic spasm,Salaam seizures|Salaam seizure|Salaam convulsions|Salaam convulsion|Epileptic spasms,"A sudden flexion, extension, or mixed extension-flexion of predominantly proximal and truncal muscles that is usually more sustained than a myoclonic movement but not as sustained as a tonic seizure. Limited forms may occur: Grimacing, head nodding, or subtle eye movements. Epileptic spasms frequently occur in clusters. Infantile spasms are the best known form, but spasms can occur at all ages",FALSE,,,,,,,,,,,,,,"The maximum age of onset is between 3 and 12 months, the peak being at 6 months. However, spasms may start from birth, or appear long after the age of 12 months, including into adulthood. Infantile spasms represent a specific type of seizure seen in an epilepsy syndrome of infancy and childhood known as West Syndrome. West Syndrome is characterized by infantile spasms, developmental regression, and hypsarrhythmia (as demonstrated by electroencephalography).",,,,,,,,,,,,,,,,,,UMLS:C1527366|UMLS:C0037769|SNOMEDCT_US:28055006,,,,,,,,,,,,,,,,,,,,,,,,,Salaam seizures|Salaam seizure|Salaam convulsions|Salaam convulsion|Epileptic spasms,,,,HP:0011097,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Epileptic spasm,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A sudden flexion, extension, or mixed extension-flexion of predominantly proximal and truncal muscles that is usually more sustained than a myoclonic movement but not as sustained as a tonic seizure. Limited forms may occur: Grimacing, head nodding, or subtle eye movements. Epileptic spasms frequently occur in clusters. Infantile spasms are the best known form, but spasms can occur at all ages",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001014,pool water,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001014,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,pool water,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HP_0033353,Abnormal blood vessel morphology,,"Any structural anomaly of a blood vessel (artery, arteriole, capillary, venule, or vein).",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0033353,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal blood vessel morphology,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Any structural anomaly of a blood vessel (artery, arteriole, capillary, venule, or vein).",,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000068,tunnel,TUNNEL,An underground or underwater passage.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Tunnel|TGN:21447|SWEETRealm:Tunnel|Geonames:R.TNLN|FTT:448|FTT:445,,,,,,,,,,,,,,,,,,,,,,,,,TUNNEL,,,,ENVO:00000068,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,tunnel,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An underground or underwater passage.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00002986,fish steak,,"A fish steak, alternatively known as a fish cutlet, is a cut of fish which is cut perpendicular to the spine and can either include the bones or be boneless.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00002986,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,fish steak,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A fish steak, alternatively known as a fish cutlet, is a cut of fish which is cut perpendicular to the spine and can either include the bones or be boneless.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02021245,lamb roast (raw),,A raw lamb roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02021245,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lamb roast (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw lamb roast.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0011009,Acute,Acute onset,Sudden appearance of disease manifestations over a short period of time.,FALSE,,,,,,,,,,,,,,"The word acute is applied to different time scales depending on the disease or manifestation and does not have an exact definition in minutes, hours, or days.",,,,,,,,,,,,,,,,,,UMLS:C0205178|SNOMEDCT_US:272118002,,,,,,,,,,,,,,,,,,,,,,,,,Acute onset,,,,HP:0011009,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Acute,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Sudden appearance of disease manifestations over a short period of time.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0011008,Temporal pattern,Speed of onset,The speed at which disease manifestations appear and develop.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4021204,,,,,,,,,,,,,,,,,,,,,,,,,Speed of onset,,,,HP:0011008,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Temporal pattern,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The speed at which disease manifestations appear and develop.,,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000471,estimate,,a estimate is a data item which is computed from a dataset to provide an approximated value (an estimator) for a 'statistical parameter'  (a 'characteristics/parameter' of the true underlying distribution) of a real population.,FALSE,,,,,,,,,,,,,,,,,,,,,STATO,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000471,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,estimate,,,,,,,,,,,,,,,,,,,,,,,,,,,,Tom Nichols|Philippe Rocca-Serra,,,,a estimate is a data item which is computed from a dataset to provide an approximated value (an estimator) for a 'statistical parameter'  (a 'characteristics/parameter' of the true underlying distribution) of a real population.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_974,upper respiratory tract disease,,A respiratory system disease which involves the upper respiratory tract.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:974,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,upper respiratory tract disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A respiratory system disease which involves the upper respiratory tract.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100226,homeless shelter exposure process,,A process occuring within or in the vicinity of a homeless shelter that exposes the recipient organism to a material entity.,FALSE,,,,,,,Homeless Shelter,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100226,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,homeless shelter exposure process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A process occuring within or in the vicinity of a homeless shelter that exposes the recipient organism to a material entity.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001854,n-dimensional space,,"An N-dimensional space consists of n dimensions, each with an origin.  It can be translated via various coordinate systems, and can be populated with N and lesser dimensional vectors.",FALSE,,,,,,,,,,,,,,"An N-dimensional space consists of n dimensions, each with an origin.  It can be translated via various coordinate systems, and can be populated with N and lesser dimensional vectors.",,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001854,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,n-dimensional space,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0000485,simple columnar epithelium,columnar epithlium|columnar epithelium,"Unilaminar epithelium, which consists of a single layer of columnar cells. Examples: ciliated columnar epithelium, gastric epithelium, microvillus columnar epithelium.[FMA].",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ZFA:0001496|XAO:0004008|Wikipedia:Simple_columnar_epithelium|UMLS:C0836135|TAO:0001496|SCTID:32210007|NCIT:C33552|HAO:0000068|FMA:45567|FBbt:00007027|EHDAA2_RETIRED:0003068|CARO:0000068|BILA:0000068|AEO:0000068|AAO:0010063,,,,,,,,,,,,,,,,,,,,,,,,columnar epithlium|columnar epithelium,simple columnar epithelium|epithelium simplex columnare,,,,UBERON:0000485,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,simple columnar epithelium,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Unilaminar epithelium, which consists of a single layer of columnar cells. Examples: ciliated columnar epithelium, gastric epithelium, microvillus columnar epithelium.[FMA].",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0000483,epithelium,portion of epithelium|epithelial tissue,"Portion of tissue, that consists of one or more layers of epithelial cells connected to each other by cell junctions and which is underlain by a basal lamina. Examples: simple squamous epithelium, glandular cuboidal epithelium, transitional epithelium, myoepithelium[CARO].",FALSE,,,,,,,,,,,,,,"Editor note: surface epithelium may contain non-epithelial cells, such as melanocytes, lymphocytes and dendritic cells, within the sheet of epithelial cells. Do we consider these part of the epithelium, or located-in it?",,,,,,,,,,,,,,,,,,ZFA:0001486|XAO:0003045|Wikipedia:Epithelium|VHOG:0000387|UMLS:C0014609|TAO:0001486|SCTID:31610004|NCIT:C12710|MESH:D004848|MA:0003060|HAO:0000066|GAID:402|FMA:9639|FBbt:00007005|EMAPA:32738|EHDAA2:0003066|CARO:0000066|CALOHA:TS-0288|BTO:0000416|BILA:0000066|AEO:0000066|AAO:0010055|AAO:0000144,,,,,,,,,,,,,,,,,,,,,,,,,portion of epithelium|epithelial tissue,,,,UBERON:0000483,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,epithelium,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Portion of tissue, that consists of one or more layers of epithelial cells connected to each other by cell junctions and which is underlain by a basal lamina. Examples: simple squamous epithelium, glandular cuboidal epithelium, transitional epithelium, myoepithelium[CARO].",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0000489,cavitated compound organ,cavitated organ,Compound organ that contains one or more macroscopic anatomical spaces.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ZFA:0001490|XAO:0003165|VHOG:0001730|TGMA:0001857|TAO:0001490|HAO:0000072|FMA:55671|EHDAA2:0003072|CARO:0000072|BILA:0000072|AEO:0000072|AAO:0010016,,,,,,,,,,,,,,,,,,,,,,,,,cavitated organ,,,,UBERON:0000489,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,cavitated compound organ,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Compound organ that contains one or more macroscopic anatomical spaces.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01001884,surface landform,,A landform which occurs on the surface of an astronomical body.,FALSE,,,,,,,,,,,,,,"The usage of ""surface"" here aligns with that of planetary surface: in contact with the atmosphere or space. The extent of the ""surface"" can vary. For rocky planets like Earth, astrogeologists consider the crust as the surface.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01001884,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,surface landform,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A landform which occurs on the surface of an astronomical body.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001757,millimetres per day,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000125,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001757,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,millimetres per day,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0002025,psychiatric disorder,mental illness|mental dysfunction|mental disorder|disease of mental health,"A disorder characterized by behavioral and/or psychological abnormalities, often accompanied by physical symptoms. The symptoms may cause clinically significant distress or impairment in social and occupational areas of functioning. Representative examples include anxiety disorders, cognitive disorders, mood disorders and schizophrenia.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCIT:C2893|MFOMD:0000004|MESH:D001523|DOID:150,,,,,,,,,,,,,,,,,,,,,,,,,Psychiatric disorder|Psychiatric disease,mental illness|mental dysfunction|mental disorder|disease of mental health,,,MONDO:0002025,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#rare_grouping|http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar|http://purl.oboInOwllibrary.org/oboInOwl/mondo#harrisons_view,,,,,,,,psychiatric disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A disorder characterized by behavioral and/or psychological abnormalities, often accompanied by physical symptoms. The symptoms may cause clinically significant distress or impairment in social and occupational areas of functioning. Representative examples include anxiety disorders, cognitive disorders, mood disorders and schizophrenia.",,,,,,,,
http://purl.obolibrary.org/obo/IAO_0000429,email address,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Alan Ruttenberg 1/3/2012 - Provisional id, see issue at https://github.com/information-artifact-ontology/IAO/issues/130&thanks=130&ts=1325636583",email address,,,,,http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,IAO:0000429,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/iao.owl,,,,,,,,,email address,,,,,,,,,,,,,,,,,,,,,,,,,,,,Person:Chris Stoeckart|Person:Alan Ruttenberg,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001951,MBD2 protein methyl-CpG binding domain method,,Enrichment by methyl-CpG binding domain.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI SRA: MBD2 protein methyl-CpG binding domain,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001951,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MBD2 protein methyl-CpG binding domain method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Enrichment by methyl-CpG binding domain.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03450004,cooking by dry heat,,Cooked at moderate to high levels of heat in which no liquid is added and only small amounts of fat may be added to prevent sticking.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=G0004,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03450004,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,cooking by dry heat,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Cooked at moderate to high levels of heat in which no liquid is added and only small amounts of fat may be added to prevent sticking.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100768,sample volume measurement,sample volume measurement value,A data field which describes the numerical value of the volume measurement of the sample collected.,FALSE,,,,,,,PCDS:sample_volume_measurement_value,,,,,,,PCDS: Provide the numerical value of volume.,,,,,,,,,,,,,,PCDS: 5,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,sample volume measurement value,sample volume measurement value slot,,,,GENEPIO:0100768,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-21T01:14:47.111Z,,,,,,,,,,,,,,,,,,,sample volume measurement,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the numerical value of the volume measurement of the sample collected.,,PCDS: The numerical value of the volume measurement of the sample collected.,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000260,"lamb sirloin half (shank off, semi-boneless)",,"A lamb sirloin half that has bones removed except for the femur and humerus bone and the designated shank (i.e. hindshank, or foreshank) is removed.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000260,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"lamb sirloin half (shank off, semi-boneless)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A lamb sirloin half that has bones removed except for the femur and humerus bone and the designated shank (i.e. hindshank, or foreshank) is removed.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001441,sequence information field category,sequencing_information|sequencing|sequence information,A data field category which refers to sequencing information fields.,FALSE,,,,,,,PCDS:sequence information data collection_slot_group,,,,,,,,,,,,,,,,,,,,,,,,metadata incomplete,,,,,,,,,,,,,,,,,sequencing_information|sequencing|sequence information,,,,,,,,PCDS:sequencing information|PCDS:sequencing,sequencing slot category|sequencing information slot category,,,,GENEPIO:0001441,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,sequence information field category,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field category which refers to sequencing information fields.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000216,beef ribeye fillet (raw),,A raw beef ribeye fillet.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000216,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef ribeye fillet (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef ribeye fillet.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002086,draft sequence repository data - geographic location,,"The geographical origin of the sample by city, region, country or latitude and logitude.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002086,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,draft sequence repository data - geographic location,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"The geographical origin of the sample by city, region, country or latitude and logitude.",,,"order:
GENEPIO_0001656 # latitude and longitude ISO 6709
GENEPIO:0000118 # specimen collection country
GENEPIO:0002097 # specimen collection state/prov/ter/region
GENEPIO:0001785 # specimen collection city",,,,,
http://purl.obolibrary.org/obo/HP_0002793,Abnormal pattern of respiration,Unusual breathing patterns|Abnormal respiratory patterns|Abnormal pattern of respiration,An anomaly of the rhythm or depth of breathing.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C1837388,,,,,,,,,,,,,,,,,,,,,,,,,Unusual breathing patterns|Abnormal respiratory patterns|Abnormal pattern of respiration,,,,HP:0002793,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal pattern of respiration,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An anomaly of the rhythm or depth of breathing.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0002795,Abnormal respiratory system physiology,Functional respiratory abnormality|Abnormal respiration,Abnormal function of the respiratory system.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4025677|Fyler:4200,,,,,,,,,,,,,,,,,,,,,,,HP:0005952,,Functional respiratory abnormality|Abnormal respiration,,,,HP:0002795,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal respiratory system physiology,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Abnormal function of the respiratory system.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001707,draft NCBI BioSample host model,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001707,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IDO_0000531,,,,,,draft NCBI BioSample host model,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100268,child role,,A role inhering in a person that is realized when the bearer is a person younger than the age of majority.,FALSE,,,,,,,Child of case,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Child,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100268,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,child role,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A role inhering in a person that is realized when the bearer is a person younger than the age of majority.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03480017,packed in water,,Water which is used as a packing medium for food material.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=K0017,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03480017,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,packed in water,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Water which is used as a packing medium for food material.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0004815,lower respiratory tract epithelium,lower respiratory tract epithelial tissue|epithelium of lower respiratory tract|epithelial tissue of lower respiratory tract,An epithelium that is part of a lower respiratory tract [Automatically generated definition].,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MA:0001481|EMAPA:37549,,,,,,,,,,,,,,,,,,,,,,,,,lower respiratory tract epithelial tissue|epithelium of lower respiratory tract|epithelial tissue of lower respiratory tract,,,,UBERON:0004815,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,lower respiratory tract epithelium,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An epithelium that is part of a lower respiratory tract [Automatically generated definition].,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0000061,anatomical structure,connected biological structure|biological structure,Material anatomical entity that is a single connected structure with inherent 3D shape generated by coordinated expression of the organism's own genome.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://dbpedia.org/ontology/AnatomicalStructure|ZFA:0000037|XAO:0003000|VHOG:0001759|TGMA:0001823|TAO:0000037|SCTID:362889002|MESH:D000825|MA:0003000|HAO:0000003|GAID:781|FMA:67135|FMA:305751|FBbt:00007001|FAO:0000001|EMAPA:0|EHDAA2:0003003|CARO:0000003|BILA:0000003|AEO:0000003|AAO:0010825,,,,,,,,,,,,,,,,,,,,,,,,,connected biological structure|biological structure,,,,UBERON:0000061,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl|http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,anatomical structure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Material anatomical entity that is a single connected structure with inherent 3D shape generated by coordinated expression of the organism's own genome.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0000068,embryo stage,embryonic stage,A life cycle stage that starts with fertilization and ends with the fully formed embryo.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,XAO:1000012|WBls:0000102|WBls:0000092|WBls:0000003|SscrDv:0000002|SsalDv:0000002|SCTID:296280003|RnorDv:0000002|PtroDv:0000002|PpanDv:0000002|OcunDv:0000002|OariDv:0000002|OanaDv:0000002|OGES:000022|OGES:000000|MmusDv:0000042|MmulDv:0000002|MdomDv:0000002|HsapDv:0000045|GgorDv:0000002|GgalDv:0000002|FcatDv:0000002|FMA:72652|FBdv:00005289|EcabDv:0000002|EV:0300001|DsimDv:0000002|DpseDv:0000002|CporDv:0000002|ChirDv:0000002|CfamDv:0000002|BtauDv:0000002|BilaDO:0000002|AcarDv:0000002,,,,,,,,,,,,,,,,,,,,,,,,,embryonic stage,,,,UBERON:0000068,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,embryo stage,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A life cycle stage that starts with fertilization and ends with the fully formed embryo.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0000069,larval stage,"zoea stage|zoea|wriggler stage|wriggler|veliger stage|veliger|trochophore stage|trochophore|tornaria|planula stage|planula|nymph stage|nymph|nauplius stage|nauplius|naiad, nymph stage|naiad, nymph|metacestode|maggot stage|maggot|leptocephalus stage|leptocephalus|grub stage|grub|glochidium stage|glochidium|caterpillar stage|caterpillar|bipinnaria stage|bipinnaria|ammocoete stage|ammocoete","A distinct juvenile stage many animals undergo before metamorphosis into adults. Animals with indirect development such as insects, amphibians, or cnidarians typically have a larval phase of their life cycle.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ZFS:0000048|Wikipedia:Larva|SsalDv:0000039|OGES:000008|MIAA:0000400|EFO:0001303|DsimDv:0000003|DpseDv:0000003|BTO:0000954|BTO:0000915,,,,,,,,,,,,,,,,,,,,,,,,,larva stage,"zoea stage|zoea|wriggler stage|wriggler|veliger stage|veliger|trochophore stage|trochophore|tornaria|planula stage|planula|nymph stage|nymph|nauplius stage|nauplius|naiad, nymph stage|naiad, nymph|metacestode|maggot stage|maggot|leptocephalus stage|leptocephalus|grub stage|grub|glochidium stage|glochidium|caterpillar stage|caterpillar|bipinnaria stage|bipinnaria|ammocoete stage|ammocoete",,,UBERON:0000069,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,larval stage,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A distinct juvenile stage many animals undergo before metamorphosis into adults. Animals with indirect development such as insects, amphibians, or cnidarians typically have a larval phase of their life cycle.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0000065,respiratory tract,,Anatomical structure that is part of the respiratory system. In mammals consists of upper and lower tracts.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,VHOG:0000393|SCTID:361110005|FMA:265130|EMAPA:16737|EHDAA:2219|EHDAA:1568|EHDAA2:0001606,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0000065,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,respiratory tract,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Anatomical structure that is part of the respiratory system. In mammals consists of upper and lower tracts.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0000064,organ part,cardinal organ part,A multicellular structure that is a part of an organ.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SCTID:91717005|SCTID:113343008|FMA:82472|EFO:0000635|BIRNLEX:16|AAO:0011124,,,,,,,,,,,,,,,,,,,,,,,,,cardinal organ part,,,,UBERON:0000064,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,organ part,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A multicellular structure that is a part of an organ.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0000062,organ,,Anatomical structure that performs a specific function or group of functions [WP].,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Organ_(anatomy)|WBbt:0003760|UMLS:C0178784|SCTID:272625005|NCIT:C13018|MA:0003001|FMA:67498|ENVO:01000162|EMAPA:35949|EFO:0000634|CARO:0020004|BIRNLEX:4,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0000062,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,organ,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Anatomical structure that performs a specific function or group of functions [WP].,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000196,beef brisket point half (raw),,A raw beef brisket point half.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000196,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef brisket point half (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef brisket point half.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03450041,food reheating in pan or cooking utensil,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=G0041,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03450041,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food reheating in pan or cooking utensil,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_03501136,clinical patient assessment facility,clinical assessment centre|CAC,A healthcare facility in which patients are medically assessed.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,clinical assessment centre|CAC,clinical patient assessment centre|clinical patient assessment center,,,,ENVO:03501136,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,clinical patient assessment facility,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A healthcare facility in which patients are medically assessed.,,,,,,,,
http://purl.obolibrary.org/obo/OMIT_0027409,Molecular Typing,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OMIT:0027409,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/omit.owl,,,,,,,,,Molecular Typing,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/OMIT_0027406,Multilocus Sequence Typing,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OMIT:0027406,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/omit.owl,,,,,,,,,Multilocus Sequence Typing,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MLST typing,,,,
http://purl.obolibrary.org/obo/RO_0002577,system,,A material entity consisting of multiple components that are causally integrated.,FALSE,,,,,,,,,,,,,,,,,,,,,http://www.jbiomedsem.com/content/4/1/43,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,RO:0002577,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/rbo.owl|http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,system,,,,,,,,,,,,,,,,,,,,,,,,,,,,Chris Mungall|https://orcid.org/0000-0002-6601-2165,,,,A material entity consisting of multiple components that are causally integrated.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002062,obsolete: antimicrobial resistance testing reference standard,,The clinical and laboratory guidelines or standards that prescribe the threshold values for determining resistance phenotypes.,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002062,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: antimicrobial resistance testing reference standard,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,http://purl.obolibrary.org/obo/ARO_3004360,,,The clinical and laboratory guidelines or standards that prescribe the threshold values for determining resistance phenotypes.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490288,"aluminium box, plastic-coated",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0288,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490288,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"aluminium box, plastic-coated",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00001995,rock,,A rock is a naturally occurring solid aggregate of one or more minerals or mineraloids.,FALSE,,,,,,,,,,,,,,"From https://en.wikipedia.org/wiki/ [A mineral] is different from a rock, which can be an aggregate of minerals or non-minerals and does not have a specific chemical composition. The exact definition of a mineral is under debate, especially with respect to the requirement a valid species be abiogenic, and to a lesser extent with regards to it having an ordered atomic structure.",,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Rock|TGN:21444|SWEETRealm:Rock|Geonames:T.RKS|Geonames:T.RK|FTT:145|FTT:1010|EcoLexicon:rock,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00001995,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,rock,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A rock is a naturally occurring solid aggregate of one or more minerals or mineraloids.,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_9091,Coturnix coturnix,,,FALSE,,,,,,,Common quail,,,,,,,,,,,,,,,,,,,Coturnix coturnix,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:9091,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Coturnix coturnix,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100558,quality control method version,quality control method version,A data field which describes the version number of the method used to assess whether a sequence passed a predetermined quality control threshold.,FALSE,,,,,,,PCDS:quality_control_method_version,,,,,,,"PCDS: Methods updates can make big differences to their outputs. Provide the version of the method used for quality control. The version can be expressed using whatever convention the developer implements (e.g. date, semantic versioning). If multiple methods were used, record the version numbers in the same order as the method names. Separate the version numbers using a semi-colon.",,,,,,,,,,,,,,PCDS: 1.2.3,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,quality control method version,quality control method version slot|quality control method version field|qc method version slot|qc method version field,,,,GENEPIO:0100558,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-1107-9135,2023-01-23T00:42:19.315Z,,,,,,,,,,,,,,,,,,,quality control method version,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the version number of the method used to assess whether a sequence passed a predetermined quality control threshold.,,PCDS: The version number of the method used to assess whether a sequence passed a predetermined quality control threshold.,,,,,,
http://purl.obolibrary.org/obo/NCIT_C147908,Hormone Therapy Agent,Hormone Therapy Drug|Hormone Therapy Agent|Hormone Therapy|Hormonal Therapy Agent,Any agent that can alter hormone levels or modulate hormone effects.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Hormone Therapy Drug|Hormone Therapy Agent|Hormone Therapy|Hormonal Therapy Agent,,,,NCIT:C147908,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Hormone Therapy Agent,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any agent that can alter hormone levels or modulate hormone effects.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0012823,Clinical modifier,Phenotypic modifier,"This subontology is designed to provide terms to characterize and specify the phenotypic abnormalities defined in the Phenotypic abnormality subontology, with respect to severity, laterality, age of onset, and other aspects.",FALSE,,,,,,,,,,,,,,"Note that some of the terms, such as Intellectual disability, have children terms such as Severe intellectual disability that represent precomposed combinations of modifiers and phenotypic abnormality terms. This done where the medical community commonly uses these terms with a fixed meaning (for instance, the Intellectual disability terms are used with specific IQ ranges). For computational reasoning, the semantics are intended to be the same as if there was a combination of the phenotype term and the clinical modifier term.",,,,,,,,,,,,,,,,,,UMLS:C4021064,,,,,,,,,,,,,,,,,,,,,,,HP:0000004,,Phenotypic modifier,,,,HP:0012823,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Clinical modifier,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"This subontology is designed to provide terms to characterize and specify the phenotypic abnormalities defined in the Phenotypic abnormality subontology, with respect to severity, laterality, age of onset, and other aspects.",,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0003900,connective tissue disorder,"tissue disease, connective|primary disorder of connective tissue|disorder of connective tissue|disease, connective tissue|disease or disorder of connective tissue|disease of connective tissue|connective tissue disorders|connective tissue disorder|connective tissue diseases|connective tissue disease or disorder|connective tissue disease",A disease involving the connective tissue.,FALSE,,,,,,,,,,,,,,"Following clinical usage of the term 'connective tissue disorder' this grouping excludes some diseases affecting tissues classically considered to be connective tissue, such as bone.",,,,,,,,,,,,,,,,,,UMLS:C0009782|SCTID:105969002|NCIT:C26729|NANDO:2100172|MESH:D003240|MEDGEN:1098|EFO:1001986|DOID:65,,,,,,,,,,,,,,,,,,,,,,,,,"tissue disease, connective|primary disorder of connective tissue|disorder of connective tissue|disease, connective tissue|disease or disorder of connective tissue|disease of connective tissue|connective tissue disorders|connective tissue disorder|connective tissue diseases|connective tissue disease or disorder|connective tissue disease",,,,MONDO:0003900,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#rare_grouping|http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar|http://purl.oboInOwllibrary.org/oboInOwl/mondo#harrisons_view,,,,,,,,connective tissue disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A disease involving the connective tissue.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001338,obsolete: earth surface,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001338,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: earth surface,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/RBO_00000017,,,,,,,,,,,
http://purl.obolibrary.org/obo/OBA_2001026,age of onset of migraine disorder,age migraine disorder symptoms begin|age at onset of migraine disorder,The age at which migraine disorder manifestations first appear.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,age migraine disorder symptoms begin|age at onset of migraine disorder,,,,OBA:2001026,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age of onset of migraine disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The age at which migraine disorder manifestations first appear.,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0006502,acute respiratory distress syndrome,shock lung|acute respiratory distress syndrome|ARDS,"Progressive and life-threatening pulmonary distress in the absence of an underlying pulmonary condition, usually following major trauma or surgery. Cases of neonatal respiratory distress syndrome are not included in this definition.",FALSE,,,,,,,,,,,,,,This disease can present as a mild ARDS (PaO2/FiO2 of 201–300 mmHg) moderate ARDS (PaO2/FiO2 of 101–200 mmHg) and severe ARDS (PaO2/FiO2 ≤100 mmHg). [PMID:30872586],,,,,,,,,,,,,,,,,,icd11.foundation:1189702844|UMLS:C2887484|NCIT:C3353|MedDRA:10001052|MEDGEN:1812214|ICD10CM:J80|EFO:1000637,,,,,,,,,,,,,,,,,,,,,,,,,shock lung|acute respiratory distress syndrome|ARDS,,,,MONDO:0006502,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,acute respiratory distress syndrome,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Progressive and life-threatening pulmonary distress in the absence of an underlying pulmonary condition, usually following major trauma or surgery. Cases of neonatal respiratory distress syndrome are not included in this definition.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100250,passenger role,,A role inhering in a person that is realized when the bearer travels in a vehicle but bears little to no responsibility for vehicle operation nor arrival at its destination.,FALSE,,,,,,,Passenger,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Passenger,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100250,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,passenger role,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A role inhering in a person that is realized when the bearer travels in a vehicle but bears little to no responsibility for vehicle operation nor arrival at its destination.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_14239,gastrointestinal tularemia,,"A tularemia that results in formation of ulcerative lesions located in gastrointestinal tract. The infection has symptom fever, has symptom chills, has symptom malaise, has symptom muscle aches, and has symptom vomiting.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:14239,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,gastrointestinal tularemia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A tularemia that results in formation of ulcerative lesions located in gastrointestinal tract. The infection has symptom fever, has symptom chills, has symptom malaise, has symptom muscle aches, and has symptom vomiting.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_1251,tuberculous epididymitis,,"An urogenital tuberculosis that is located_in epididymis, has_symptom pain and has_symptom scrotal swelling.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:1251,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,tuberculous epididymitis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An urogenital tuberculosis that is located_in epididymis, has_symptom pain and has_symptom scrotal swelling.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510073,no tropical oils added claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0073,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510073,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,no tropical oils added claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000052,beef chuck roll,,"A large, boneless cut that comes from between the ribs and backbone. It contains a mix of tender and somewhat tough muscles, which are fabricated into smaller cuts known as the chuck eye roll and the chuck under blade.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000052,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef chuck roll,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A large, boneless cut that comes from between the ribs and backbone. It contains a mix of tender and somewhat tough muscles, which are fabricated into smaller cuts known as the chuck eye roll and the chuck under blade.",,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00013817,"populated place, Liechtenstein",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00013817,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Liechtenstein",http://purl.obolibrary.org/obo/GAZ_00003858,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_48975,substituted aniline,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:48975,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,substituted aniline,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000170,Mauritian Creole,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000170,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Mauritian Creole,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000171,Tamil,,A Eastern African population with a population size of 0.055 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000171,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Tamil,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Eastern African population with a population size of 0.055 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000179,Nankani,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000179,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Nankani,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000109,I2B2 Data Protection role standard,,The I2B2 Workbench Data Protection role standard is a standard which names and lists data protection roles between a user and a given dataset that define the level of detail a user has access to.,FALSE,,,,,,,,,,,,,,,,,,,,,Derived from the Data Protection Track of the I2B2 Workbench software specification: https://www.i2b2.org/software/files/PDF/current/IM_Architecture.pdf,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000109,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,I2B2 Data Protection role standard,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,The I2B2 Workbench Data Protection role standard is a standard which names and lists data protection roles between a user and a given dataset that define the level of detail a user has access to.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000051,core genome fingerprinting assay,,The process of fingerprinting the core genome of a bacteria.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Add under upcomming OBI ""DNA fingerprinting assay"".",,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000051,,,,"Some bacteria like E coli have a highly variable genome, and so to type them methods must focus on typing the core genome that is common to all strains.",,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,,,,,,,core genome fingerprinting assay,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,The process of fingerprinting the core genome of a bacteria.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000182,beef inside skirt steak (raw),,A raw beef inside skirt steak.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000182,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef inside skirt steak (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef inside skirt steak.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000927,day care building,daycare building|child care building,"A building which is used to care for a human child during the working day by a person, outside the child's immediate family, other than that child's legal guardians.",FALSE,,,,,,,,,,,,,,This is a kind of day care facility. A facility need not be a building.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,daycare building|child care building,,,,ENVO:01000927,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,day care building,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A building which is used to care for a human child during the working day by a person, outside the child's immediate family, other than that child's legal guardians.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100443,animal or plant population,weather_type|weather type,A data field which describes the type of animal or plant population inhabiting an area.,FALSE,,,,,,,PCDS:animal_or_plant_population,,,,,,,"PCDS: This field should be used when a sample is taken from an environmental location inhabited by many individuals of a specific type, rather than describing a sample taken from one particular host. If applicable, provide the standardized term and ontology ID for the animal or plant population name. The standardized term can be sourced from this look-up service: https://www.ebi.ac.uk/ols/ontologies/genepio. If not applicable, leave blank.",,,,,,,,,,,"Regarding heat, dryness, sunshine, wind, rain, etc.",,,PCDS: Turkey [NCBITaxon:9103],,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,weather_type|weather type,weather type slot,,,,GENEPIO:0100443,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,animal or plant population,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the type of animal or plant population inhabiting an area.,,PCDS: The type of animal or plant population inhabiting an area.,,,,,,
http://purl.obolibrary.org/obo/NCIT_C93044,Index Case,index case|Index Case,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,index case|Index Case,,,,NCIT:C93044,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Index Case,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510269,Apache food claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0269,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510269,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,Apache food claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510202,protein special claim,,Food that is promoted as being either high or low in protein.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0202,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510202,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,protein special claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Food that is promoted as being either high or low in protein.,,,,,,,,
http://purl.obolibrary.org/obo/MI_0489,source database,,Database that originally provided the interaction record for exchange purposes.,FALSE,,,,,,,,,,,,,,"Damion Dooley's note: GenEpiO is using members of this class for the first part of the hasDbXref relation.  This is where we are keeping the mapping between a code and its source database.

Depending on its context, hasDbXref annotations may point directly to metadata field names in the target database, and may be annotated with additional information that guides any additional specifications that impact on data conversion of these fields.",,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,PMID:14755292,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MI:0489,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,source database,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.ontobee.org/ontology/MI,,Database that originally provided the interaction record for exchange purposes.,,,,data source,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100044,VeroE6/TMPRSS2 cell line,Vero-E6/TMPRSS2 cell|Vero E6/TMPRSS2 cell,VeroE6 cells expressing the transmembrane serine protease TMPRSS2.,FALSE,,,,,,,,,,,,,,,,,,,,,https://cellbank.nibiohn.go.jp/~cellbank/en/search_res_det.cgi?ID=8668,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,Vero-E6/TMPRSS2 cell|Vero E6/TMPRSS2 cell,,,,GENEPIO:0100044,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,VeroE6/TMPRSS2 cell line,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,VeroE6 cells expressing the transmembrane serine protease TMPRSS2.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100964,diagnostic measurement unit,diagnostic measurement unit 3|diagnostic measurement unit 2|diagnostic measurement unit 1,A data field which describes the unit of the result from a diagnostic test.,FALSE,,,,,,,PCDS:diagnostic_measurement_unit_*,,,,,,,"PCDS: Select a value from the pick list provided, to describe the units of the given diagnostic test.",,,,,,,,,,,,,,PCDS: cycle threshold (Ct),,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,diagnostic measurement unit 3|diagnostic measurement unit 2|diagnostic measurement unit 1,,,,GENEPIO:0100964,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,diagnostic measurement unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the unit of the result from a diagnostic test.,,PCDS: The unit of the result from a diagnostic test.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001147,gisaid accession,GISAID accession,An identifier field which describes the Global Initiative on Sharing Avian Influenza Data (GISAID) accession number assigned to the sequence.,FALSE,,,,,,,PCDS:gisaid_accession,,,,,,,PCDS: Store the accession returned from the GISAID submission.,,,,,,,,,,,,,,PCDS: EPI_ISL_436489,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,GISAID accession,Global Initiative on Sharing Avian Influenza Data accession slot|Global Initiative on Sharing Avian Influenza Data accession field|GISAID accession slot,,,,GENEPIO:0001147,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,gisaid accession,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An identifier field which describes the Global Initiative on Sharing Avian Influenza Data (GISAID) accession number assigned to the sequence.,,PCDS: The GISAID accession number assigned to the sequence.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002109,draft EBI antimicrobial susceptibility test V. 2017-08-30,,A standard for European Bioinformatics Institute (EBI) antibiogram data submission,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002109,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,draft EBI antimicrobial susceptibility test V. 2017-08-30,,,,,,,,,,,,,,,,,,,,,,https://github.com/EBI-COMMUNITY/compare-amr/blob/master/Antimicrobial-susceptibility-testing-data-submission_V_2017-08-30.pdf,,,,,,Damion Dooley,,,,A standard for European Bioinformatics Institute (EBI) antibiogram data submission,,,"order:
OBI:0001616 # BioSample_ID
GENEPIO:0001640 # Species
GENEPIO:0001187 # Antibiotic_Name
GENEPIO:0002062 # AST_Standard
GENEPIO:0002111 # Breakpoint_version
NCIT:C85540 # Laboratory_typing_method
GENEPIO:0002112 # Measurement
GENEPIO:0002080 # Measurement_units
GENEPIO:0001001 # Measurement_sign
NCIT:C85539 # Resistance_phenotype
GENEPIO:0002181 # Resistance_phenotype - ECOFF
GENEPIO:0002049 # Platform",,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100610,reference protein sequence length datum,,A reference sequence length measurement datum which describes the number of positions of a reference protein.,FALSE,,,,,,,reference protein length,,,,,,,,,,,,,,Emma Griffiths,,,,,reference protein sequence length datum,,The sequence length measurment datum for the SARS-CoV-2 reference sequence (NC_045512.2) nps13_ZBD protein (YP_009725308.1) is 1802 bp.,,,ready for release,http://purl.obolibrary.org/obo/OBI_0002889,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100610,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,reference protein sequence length datum,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-1107-9135,,,https://github.com/obi-ontology/obi/issues/1579,A reference sequence length measurement datum which describes the number of positions of a reference protein.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000026,well,,"A cylindrical hole, pit, or tunnel drilled or dug down to a depth from which water, oil, or gas can be pumped or brought to the surface.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Well|TGN:51255|SWEETRealm:Well|Geonames:H.WLLS|Geonames:H.WLL|FTT:833|FTT:1237|FTT:1032|EcoLexicon:well,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00000026,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,well,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A cylindrical hole, pit, or tunnel drilled or dug down to a depth from which water, oil, or gas can be pumped or brought to the surface.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03460196,chloride added claim,,A claim that chloride has been added to an edible product.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=H0196,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03460196,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,chloride added claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A claim that chloride has been added to an edible product.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_29347,monocarboxylic acid amide,,A carboxamide derived from a monocarboxylic acid.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:6977|CHEBI:25383|CHEBI:22207|CHEBI:13211,,,,,,CHEBI:29347,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,monocarboxylic acid amide,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A carboxamide derived from a monocarboxylic acid.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001494,notification date,,A notification date is the date that an outbreak is suspected by a laboratory or other agency and is reported per outbreak detection guidelines.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001494,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,notification date,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A notification date is the date that an outbreak is suspected by a laboratory or other agency and is reported per outbreak detection guidelines.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001647,original submission,,An identifier used in the initial submission of content to a repository.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001647,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,original submission,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An identifier used in the initial submission of content to a repository.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001880,datetime linear coordinate,,"Some dates don't belong to a range other than the overall timeline.

Other dates associated with a process fall within a range that has a start and end bound.",FALSE,,,,,,,,,,,,,,"Some dates don't belong to a range other than the overall timeline.

Other dates associated with a process fall within a range that has a start and end bound.",,,,,,,,,,,"As mentioned here: http://www.datypic.com/sc/xsd11/t-xsd_dateTimeStamp.html , we could change this to dateTimeStamp if we need to enforce a time zone?",,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001880,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,datetime linear coordinate,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_850,lung disease,,"A lower respiratory tract disease in which the function of the lungs is adversely affected by narrowing or blockage of the airways resulting in poor air flow, a loss of elasticity in the lungs that produces a decrease in the total volume of air that the lungs are able to hold, and clotting, scarring, or inflammation of the blood vessels that affect the ability of the lungs to take up oxygen and to release carbon dioxide.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:850,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,lung disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A lower respiratory tract disease in which the function of the lungs is adversely affected by narrowing or blockage of the airways resulting in poor air flow, a loss of elasticity in the lungs that produces a decrease in the total volume of air that the lungs are able to hold, and clotting, scarring, or inflammation of the blood vessels that affect the ability of the lungs to take up oxygen and to release carbon dioxide.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470182,low-temperature-long-time (LTLT) pasteurization,,A pasteurization by heating process which uses low heat for a longer time to kill pathogenic bacteria.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0182,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470182,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,low-temperature-long-time (LTLT) pasteurization,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A pasteurization by heating process which uses low heat for a longer time to kill pathogenic bacteria.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001864,1D coordinate system,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/UO_0000000,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001864,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,1D coordinate system,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001274,outbreak human exposure event location,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001274,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,outbreak human exposure event location,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00001251,avian food product,,A food product that is derived from some avian animal.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00001251,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,avian food product,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A food product that is derived from some avian animal.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000279,lamb tenderloin,,"A whole cut that is derived from the short loin or any loin item that includes the sirloin. Because of its anatomical location, the tenderloin is the least exercised muscle in the carcass thus the name “Tender” Loin. The cut location is from underneath the finger bones in the short loin and the hipbone in the sirloin.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000279,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lamb tenderloin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A whole cut that is derived from the short loin or any loin item that includes the sirloin. Because of its anatomical location, the tenderloin is the least exercised muscle in the carcass thus the name “Tender” Loin. The cut location is from underneath the finger bones in the short loin and the hipbone in the sirloin.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_35605,carbon oxoacid,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:35605,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,carbon oxoacid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001100,draft antibiogram drug test model,,This is the minimal set of parameters for drug test results for a particular antimicrobial agent.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001100,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,draft antibiogram drug test model,,,,,,,,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/biosample/docs/antibiogram/|http://the-vet.net/DVMWiz/Vetlibrary/Lab-%20Microbiology%20Guide%20to%20Interpreting%20MIC.htm,,,,,,Damion Dooley,,,,This is the minimal set of parameters for drug test results for a particular antimicrobial agent.,,,"order:
GENEPIO:0001187 #  antimicrobial resistance test drug
GENEPIO:0002112 # drug MIC
GENEPIO:0002080 # drug minimum inhibitory concentration unit
GENEPIO:0001001 # measurement comparator
NCIT:C85539 # antimicrobial resistance phenotype
GENEPIO:0002181 # antimicrobial resistance phenotype - ECOFF",,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001669,stable health status,,,FALSE,,,,,http://purl.obolibrary.org/obo/GENEPIO_0001842,,,,http://purl.obolibrary.org/obo/GENEPIO_0001841,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001669,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,stable health status,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0002026,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/PATO_0000069,deviation (from_normal),,A quality inhering in a bearer by virtue of the whether the bearer differs from normal or average.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PATO:0000069,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/pato.owl,http://purl.oboInOwllibrary.org/oboInOwl/pato#attribute_slim,,,,,,,,deviation (from_normal),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A quality inhering in a bearer by virtue of the whether the bearer differs from normal or average.,,,,,,,,
http://purl.obolibrary.org/obo/PATO_0000068,qualitative,,"A quality of an entity that is descriptive or observational, typically not represented numerically.",FALSE,,,,,,,,,,,,,,TODO: define this or obsolete it and move children somewhere else.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PATO:0000068,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/pato.owl,,,,,,,,,qualitative,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A quality of an entity that is descriptive or observational, typically not represented numerically.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002713,obsolete: drag swab,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002713,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: drag swab,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/OBI_0002822,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002107,isolation medium,,An isolation medium is a culture medium which has the disposition to encourage growth of particular bacteria to the exclusion of others in the same growth environment.,FALSE,,,,,,,PCDS:isolation_medium,,,,,,,PCDS: Select the isolation medium from the pick list.,,,,,,,,,,,"Chris has proposed this term for OBI as ""enrichment culture medium""",,,PCDS: Brain heart infusion (BHI),,,metadata incomplete|http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002107,,,,,,,,,,,,,,2026-04-13T17:18:02.461Z,,,,,,,,,,,,,,,,,,,isolation medium,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,An isolation medium is a culture medium which has the disposition to encourage growth of particular bacteria to the exclusion of others in the same growth environment.,,PCDS: An isolation medium is a culture medium which has the disposition to encourage growth of particular bacteria to the exclusion of others in the same growth environment.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100602,sequence identity percentage,,A data item which is the number of matches (identical characters) in positions from an alignment of two molecular sequences as a percentage.,FALSE,,,,,,,,,,,,,,,,,,,,,http://edamontology.org/data_1412,,,,,sequence identity percentage,,The BLAST results for two sequences of interest resulted in a sequence identity of 50%; i.e. only 50% of the sequences matched in both nucleotide content and corresponding positions when performing a theoretically optimal local alignment.,,,ready for release,http://purl.obolibrary.org/obo/OBI_0002882,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100602,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,sequence identity percentage,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-1107-9135,,,https://github.com/obi-ontology/obi/issues/1579,A data item which is the number of matches (identical characters) in positions from an alignment of two molecular sequences as a percentage.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000050,beef chuck tender roast,,A roast cut from the beef chuck tender.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000050,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef chuck tender roast,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A roast cut from the beef chuck tender.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001106,other project data type,,Other: a free text description is provided to indicate Other data type,FALSE,,,,,,,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/books/NBK54364/,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001106,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,other project data type,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,Other: a free text description is provided to indicate Other data type,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00003001,cutlet,,"A thin slice of meat from the leg or ribs of veal, pork, chicken, or mutton.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00003001,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,cutlet,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A thin slice of meat from the leg or ribs of veal, pork, chicken, or mutton.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038707,anterior pancreaticoduodenal lymph node,no. 17 pancreaticoduodenal lymph node|jPS 17 node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:277368,,,,,,,,,,,,,,,,,,,,,,,,,no. 17 pancreaticoduodenal lymph node|jPS 17 node,,,,UBERON:0038707,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,anterior pancreaticoduodenal lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038700,posterior inferior pancreaticoduodenal lymph node,posteroinferior pancreaticoduodenal lymph node|no. 13b pancreaticoduodenal lymph node|jPS no. 13b node|jPS 13b node,Inferior pancreaticoduodenal lymph node located on the posterior aspect of inferior region of head of pancreas.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:277317,,,,,,,,,,,,,,,,,,,,,,,,,posteroinferior pancreaticoduodenal lymph node|no. 13b pancreaticoduodenal lymph node|jPS no. 13b node|jPS 13b node,,,,UBERON:0038700,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,posterior inferior pancreaticoduodenal lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Inferior pancreaticoduodenal lymph node located on the posterior aspect of inferior region of head of pancreas.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0001622,investigation title,,A textual entity that denotes an investigation.,FALSE,,,,,,,,,,,,,http://purl.obolibrary.org/obo/OBI_0000066,,,,,,,,NIAID GSCID-BRC metadata working group,,,,,investigation title,,,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0001622,,,,,,,,,,,,,,,,,,,,,,,,,NIAID GSCID-BRC|NCBI BioProject,,,,,,,,investigation title,,,,,,,project title,,,,,,,,,,,,,,,,,,,,,"Person:Chris Stoeckert, Jie Zheng",,,,A textual entity that denotes an investigation.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490263,tin solder,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0263,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490263,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,tin solder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000444,woodland clearing,forest clearing,A tract of land which has few or no trees and is surrounded by more heavily wooded areas.,FALSE,,,,,,,,,,,,,,"There should be a better superclass than ""field"" which should indicate that there are no woody plants in growth form ""tree"" around.",,,,,,,,,,,,,,,,,,TGN:21651|LTER:79|Geonames:L.CLG|FTT:488|FTT:259,,,,,,,,,,,,,,,,,,,,,,,,,clearing|CLEARING,forest clearing,,,ENVO:00000444,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,woodland clearing,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A tract of land which has few or no trees and is surrounded by more heavily wooded areas.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100936,ambient temperature measurement unit,ambient temperature measurement value,An environmental data field which describes the units of a measurement of the ambient temperature.,FALSE,,,,,,,PCDS:ambient_temperature_measurement_unit,,,,,,,PCDS: Provide the units of the measured temperature.,,,,,,,,,,,,,,PCDS: degree Celsius (C),,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,ambient temperature measurement value,ambient temperature measurement value slot,,,,GENEPIO:0100936,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,ambient temperature measurement unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the units of a measurement of the ambient temperature.,,PCDS: The units of a measurement of the ambient temperature.,,,,,,
http://purl.obolibrary.org/obo/OBI_0002812,protective apron,,A personal protective clothing item which is an apron.,FALSE,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Apron,,,,,protective apron,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0002812,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,protective apron,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://orcid.org/0000-0002-8844-9165,,,https://github.com/obi-ontology/obi/issues/1193,A personal protective clothing item which is an apron.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100137,Ion Torrent Proton,,A DNA sequencer manufactured by the Ion Torrent corporation which utilizes Ion semiconductor sequencing and has an output capacity of up to 15 Gb.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100137,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,Ion Torrent Proton,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A DNA sequencer manufactured by the Ion Torrent corporation which utilizes Ion semiconductor sequencing and has an output capacity of up to 15 Gb.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001828,EcoLexicon,,EcoLexicon is a terminological resource developed by the LexiCon Research Group at the University of Granada.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001828,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,EcoLexicon,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,http://ecolexicon.ugr.es/en/index.htm,,EcoLexicon is a terminological resource developed by the LexiCon Research Group at the University of Granada.,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0100320,post-COVID-19 disorder,,"A SARS-CoV-2-related disease that is caused by infection by SARS-CoV-2, and manifests after the original primary infection.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MONDO:0100320,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,,,,,,,,,post-COVID-19 disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A SARS-CoV-2-related disease that is caused by infection by SARS-CoV-2, and manifests after the original primary infection.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490264,"ceramic or earthenware bottle, coloured",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0264,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490264,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"ceramic or earthenware bottle, coloured",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001600,mapping objective,,"Maps: non-sequence based map data; e.g., genetic, radiation hybrid, cytogenetic, etc.",FALSE,,,,,,,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/books/NBK54364/,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001600,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,mapping objective,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"Maps: non-sequence based map data; e.g., genetic, radiation hybrid, cytogenetic, etc.",,,,maps,,,,
http://purl.obolibrary.org/obo/NCBITaxon_452646,Neogale vison,,,FALSE,,,,,,,mink|American mink,,,,,,,,,,,,,,,,,,,Neogale vison,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:452646,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Neogale vison,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HP_0003674,Onset,Age symptoms begin|Age of onset,The age group in which disease manifestations appear.,FALSE,,,,,,,,,,,,,,Adolescent is defined by WHO as a person between 10-19 years of age.,,,,,,,,,,,,,,,,,,UMLS:C0206132|MESH:D017668,,,,,,,,,,,,,,,,,,,,,,,HP:0011007|HP:0003668|HP:0003664|HP:0003663|HP:0003630|HP:0003628|HP:0003626|HP:0003618|HP:0003603|HP:0003602|HP:0003597|HP:0003590|HP:0003588,,Age symptoms begin|Age of onset,,,,HP:0003674,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl|http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Onset,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The age group in which disease manifestations appear.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0002802,laboratory coat,,A personal protective clothing item which is an overcoat worn by medical or laboratory professionals.,FALSE,,,,,,,white coat,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/White_coat,,,,,laboratory coat,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0002802,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,laboratory coat,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://orcid.org/0000-0002-8844-9165,,,https://github.com/obi-ontology/obi/issues/1193,A personal protective clothing item which is an overcoat worn by medical or laboratory professionals.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0000737,Irritability,Increased emotional sensitivity|Increased emotional instability|Heightened reactivity state|Frustration intolerance|Exasperation|Emotional overactivity|Dysphoric agitation|Behavioral irritation state,"An emotional state characterized by negative feelings of heightened frustration, annoyance, or feeling upset, often triggered by internal factors (e.g., fatigue, hunger, unfulfilled desires) or external factors (e.g., social or environmental challenges). Irritability may be unpredictable, and is accompanied by a lowered threshold for emotional reactivity and observable features (speech, facial expressions, or psychomotor activity).",FALSE,,,,,,,,,,,,,,Consider the context of the individual experience; the state of being irritable implies a change from a recognized baseline. Irritability as a trait implies an enduring feature (years) of the individual.,,,,,,,,,,,,,,,,,,UMLS:C2700617,,,,,,,,,,,,,,,,,,,,,,,,Increased emotional sensitivity|Increased emotional instability|Heightened reactivity state|Frustration intolerance|Exasperation|Emotional overactivity|Dysphoric agitation|Behavioral irritation state,Short tempered|Short fuse|Quick-temper|On edge|Irritable mood|Irritable|Irritability|Hot-temper|Grumpy|Easily upset|Easily bothered|Easily annoyed|Cranky,,,,HP:0000737,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Irritability,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An emotional state characterized by negative feelings of heightened frustration, annoyance, or feeling upset, often triggered by internal factors (e.g., fatigue, hunger, unfulfilled desires) or external factors (e.g., social or environmental challenges). Irritability may be unpredictable, and is accompanied by a lowered threshold for emotional reactivity and observable features (speech, facial expressions, or psychomotor activity).",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002233,food isolate,,An isolate derived from a food sample.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002233,,,,,,,,,,,,,,2019-06-28T23:41:26Z,,,,,,,,,,,,,,,,,,,food isolate,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,An isolate derived from a food sample.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0035765,subsegmental lymph node,,The lymph nodes around the subsegmental bronchi.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C1515031|NCIT:C28745|FMA:276861,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0035765,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,subsegmental lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The lymph nodes around the subsegmental bronchi.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0035764,pulmonary lymph node,pulmonary node|intrapulmonary lymph node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:5968,,,,,,,,,,,,,,,,,,,,,,,,,pulmonary node|intrapulmonary lymph node,,,,UBERON:0035764,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,pulmonary lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490259,metal gasket,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0259,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490259,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,metal gasket,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_03501198,wet market,,A market which is used for the sale and purchase of perishable goods.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:03501198,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,wet market,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A market which is used for the sale and purchase of perishable goods.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_83821,amino-acid derivative,,"Any derivative of an amino acid resulting from reaction at an amino group, carboxy group, side-chain functional group, or from the replacement of any hydrogen by a heteroatom. The definition normally excludes peptides containing amino acid residues.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:25359,,,,,,CHEBI:83821,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,amino-acid derivative,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Any derivative of an amino acid resulting from reaction at an amino group, carboxy group, side-chain functional group, or from the replacement of any hydrogen by a heteroatom. The definition normally excludes peptides containing amino acid residues.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_2326,gastroenteritis,,"A gastrointestinal system infectious disease that involves inflammation of the lining of the stomach and small and large intestines, which is caused by viruses, bacteria, or parasites. Chemicals and drugs also cause gastroenteritis. The symptoms include diarrhea, loss of appetite, nausea, vomiting, cramps, and discomfort in the abdomen.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:2326,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,gastroenteritis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A gastrointestinal system infectious disease that involves inflammation of the lining of the stomach and small and large intestines, which is caused by viruses, bacteria, or parasites. Chemicals and drugs also cause gastroenteritis. The symptoms include diarrhea, loss of appetite, nausea, vomiting, cramps, and discomfort in the abdomen.",,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00010069,"populated place, Antigua and Barbuda",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00010069,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Antigua and Barbuda",http://purl.obolibrary.org/obo/GAZ_00006883,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038048,antebrachial lymph node,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:234527,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0038048,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,antebrachial lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HP_0012211,Abnormal renal physiology,Renal functional abnormality|Kidney function issue|Abnormality of renal physiology|Abnormal renal function|Abnormal kidney function,An abnormal functionality of the kidney.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0151746|SNOMEDCT_US:39539005,,,,,,,,,,,,,,,,,,,,,,,HP:0008646|HP:0005566|HP:0000087|HP:0000082,,Renal functional abnormality|Kidney function issue|Abnormality of renal physiology|Abnormal renal function|Abnormal kidney function,,,,HP:0012211,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal renal physiology,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An abnormal functionality of the kidney.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100302,health complications enumeration,,A data enumeration which references a set of named complications entities.,FALSE,,,,,,,complications,,,,,,,,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100302,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,health complications enumeration,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data enumeration which references a set of named complications entities.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C85540,Microbial Susceptibility Test,Microbiology Susceptibility Test|Microbial Susceptibility Test|Microbial Susceptibility|MSTEST|MICROSUS,A method to determine whether microbial growth is affected by an antimicrobial compound.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Microbiology Susceptibility Test|Microbial Susceptibility Test|Microbial Susceptibility|MSTEST|MICROSUS,,,,NCIT:C85540,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Microbial Susceptibility Test,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A method to determine whether microbial growth is affected by an antimicrobial compound.,,,,antimicrobial resistance testing method,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100198,first nations reserve exposure process,,A process occuring within or in the vicinity of a first nations reserve that exposes the recipient organism to a material entity.,FALSE,,,,,,,First Nations Reserve,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100198,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,first nations reserve exposure process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A process occuring within or in the vicinity of a first nations reserve that exposes the recipient organism to a material entity.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490184,"plastic container, rigid or semirigid",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0184,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490184,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"plastic container, rigid or semirigid",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001196,specimen with confirmed presence of disease agent,,A specimen which has been confirmed by laboratory test(s) to contain a disease-causing agent such as a pathogen,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001196,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,specimen with confirmed presence of disease agent,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A specimen which has been confirmed by laboratory test(s) to contain a disease-causing agent such as a pathogen,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100560,quality control issues,quality control issues,"A data field which describes the reason contributing to, or causing, a low quality determination in a quality control assessment.",FALSE,,,,,,,PCDS:quality_control_issues,,,,,,,"PCDS: Select a value from the pick list provided. If a desired value is missing, submit a new term request to the PHA4GE QC Tag GitHub issuetracker using the New Term Request form.",,,,,,,,,,,,,,PCDS: low average genome coverage,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,quality control issues,quality control issues slot|quality control issues field|qc issues slot|qc issues field,,,,GENEPIO:0100560,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-1107-9135,2023-01-23T00:42:19.315Z,,,,,,,,,,,,,,,,,,,quality control issues,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A data field which describes the reason contributing to, or causing, a low quality determination in a quality control assessment.",,"PCDS: The reason contributing to, or causing, a low quality determination in a quality control assessment.",,,,,,
http://purl.obolibrary.org/obo/NCIT_C25251,Primary,Primary,Occurring first in time or sequence; original; of greatest rank or importance or value.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Primary,,,,NCIT:C25251,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Primary,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Occurring first in time or sequence; original; of greatest rank or importance or value.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000016,obsolete: NCBI antibiogram data item,,An NCBI antibiogram data item is an antimicrobial susceptibility and resistance datum related to drug resistant pathogens. This information is provided within an antibiogram table on BioSample records.,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000227,,,,,,,,,,,,,,,,,,,GENEPIO:0000016,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: NCBI antibiogram data item,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,http://purl.obolibrary.org/obo/GENEPIO_0001007,,,An NCBI antibiogram data item is an antimicrobial susceptibility and resistance datum related to drug resistant pathogens. This information is provided within an antibiogram table on BioSample records.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0003326,Myalgia,Muscle pain|Muscle ache,Pain in muscle.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0231528|SNOMEDCT_US:68962001,,,,,,,,,,,,,,,,,,,,,,,HP:0003718,,Muscle pain|Muscle ache,,,,HP:0003326,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Myalgia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Pain in muscle.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0012274,columnar epithelium,,"An epithelium that consists of columnar epithelial cells. Columnar epithelia are epithelial cells whose heights are at least four times their width. Columnar epithelia are divided into simple (or unilayered), and the rarer stratified (or multi-layered).[WP, modified].",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Columnar_epithelium,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0012274,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,columnar epithelium,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An epithelium that consists of columnar epithelial cells. Columnar epithelia are epithelial cells whose heights are at least four times their width. Columnar epithelia are divided into simple (or unilayered), and the rarer stratified (or multi-layered).[WP, modified].",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0012273,periampullary region of duodenum,periampullary region,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C1882332|NCIT:C60699,,,,,,,,,,,,,,,,,,,,,,,,,periampullary region,,,,UBERON:0012273,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,periampullary region of duodenum,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000985,fairground,,A part of an ecosystem which has been allocated to host a gathering of people for multiple entertainment or commercial activities.,FALSE,,,,,,,,,,,,,,"Fairgrounds, or parts thereof, may be constructed (e.g. concreted over) or be natural (e.g. clearings or heaths), thus land use is the key differentia.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01000985,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,fairground,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A part of an ecosystem which has been allocated to host a gathering of people for multiple entertainment or commercial activities.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_29556,chloroeremomycin,,A complex glycopeptide antibiotic that is isolated from <em>Amycolatopsis orientalis</em>.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:29556,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,chloroeremomycin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A complex glycopeptide antibiotic that is isolated from <em>Amycolatopsis orientalis</em>.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_9856,congenital syphilis,,A syphilis that results_in a multisystem infection in the fetus via the placenta.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:9856,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,congenital syphilis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A syphilis that results_in a multisystem infection in the fetus via the placenta.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_03501137,hospital unit facility,hospital ward,A healthcare facility which 1) is located in part of a hospital and 2) is used by an organizational unit within a hospital.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,hospital ward,,,,ENVO:03501137,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,hospital unit facility,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A healthcare facility which 1) is located in part of a hospital and 2) is used by an organizational unit within a hospital.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0005678,NML LabWare sample primary key,Public Health Agency of Canada National Microbiology Laboratory LabWare sample number|PHAC NML LabWare sample number|National Microbiology Laboratory LabWare sample number|NML LabWare sample number,A numeric sample identifier assigned to a sample or specimen by the Public Health Agency of Canada’s National Microbiology Laboratory (NML) LabWare database. This number is the unique primary key of the NML Labware database SAMPLE table.,FALSE,,,,,,,PCDS:nml_labware_sample_number,,,,,,,PCDS: Provide the LabWare sample number exactly as generated by the NML Branch of the Public Health Agency of Canada and recorded in the NML LabWare system. It supports system-to-system integration and specimen tracking and should be included when available.,,,,,,,,,,,"These metadata fields are defined specifically to describe Public Health Agency of Canada’s (PHAC) National Microbiology Laboratory (NML) data fields. They are organizational constructs intended to support a particular template and underlying database and should not be reused to model metadata outside the intended context. Where possible, more general, template‑independent terms should be used instead.",,,PCDS: 4589123,,,pending final vetting,,,,,,,,,,,,,,,,,,,,,,,,,Public Health Agency of Canada National Microbiology Laboratory LabWare sample number|PHAC NML LabWare sample number|National Microbiology Laboratory LabWare sample number|NML LabWare sample number,National Microbiology Laboratory LabWare sample number slot|National Microbiology Laboratory LabWare sample number field|NML LabWare sample number slot|NML LabWare sample number field|NML LabWare sample id,,,,GENEPIO:0005678,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-5275-8866|http://purl.obolibrary.org/obo/genepio/components/specification.owl#NMLB-DOT,2026-03-06T11:22:46Z,,,,,,,,,,,,,,,,,,,NML LabWare sample primary key,,,,,,,,,,,,,,,,,,,,,,https://www.canada.ca/en/public-health/programs/national-microbiology-laboratory.html,,,,,,,,,https://github.com/GenEpiO/genepio/issues/111,A numeric sample identifier assigned to a sample or specimen by the Public Health Agency of Canada’s National Microbiology Laboratory (NML) LabWare database. This number is the unique primary key of the NML Labware database SAMPLE table.,,PCDS: A numeric sample identifier assigned to a sample or specimen by the Public Health Agency of Canada’s National Microbiology Laboratory (NML) LabWare database. This number is the unique primary key of the NML Labware database SAMPLE table.,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490113,textile or fabric stocking or casing,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0113,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490113,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,textile or fabric stocking or casing,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_subspecies,subspecies,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:subspecies,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,subspecies,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02010190,"piece of animal breast (skinless, boneless, raw)",,A raw piece of skinless and boneless animal breast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02010190,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"piece of animal breast (skinless, boneless, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw piece of skinless and boneless animal breast.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000018,obsolete: subject species,,"The natural (as opposed to laboratory) full scientific taxonomic name of a subject related to a given investigation, study and/or specimen.",TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000227,,,,,,,,,,,,,,,,,,,GENEPIO:0000018,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: subject species,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,http://purl.obolibrary.org/obo/GENEPIO_0001567,,,"The natural (as opposed to laboratory) full scientific taxonomic name of a subject related to a given investigation, study and/or specimen.",,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000528,Bedik,,A Western African population with a population size of 2500,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000528,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Bedik|Bedik,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Western African population with a population size of 2500,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000529,Bassari,,A Western African population with a population size of 40800,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000529,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Bassari|Bassari,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Western African population with a population size of 40800,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000526,Kombe,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000526,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Kombe|Kombe,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000527,Luvale,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000527,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Luvale|Luvale,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000524,Baule,,A Akan population with a population size of 5 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000524,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Baule|Baule,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Akan population with a population size of 5 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000523,Anaang,,A Western African population with a population size of 2.6 million,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000523,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Anaang|Anaang,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Western African population with a population size of 2.6 million,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000521,Aja,,A Western African population with a population size of 810000,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000521,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Aja|Aja,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Western African population with a population size of 810000,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000522,Fante,,A Akan population with a population size of 2 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000522,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Fante|Fante,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Akan population with a population size of 2 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000520,Aghem,,A Western African population with a population size of 61500,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000520,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Aghem|Aghem,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Western African population with a population size of 61500,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000525,Bamum,,A Western African population with a population size of 659000,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000525,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Bamum|Bamum,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Western African population with a population size of 659000,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001792,data obfuscated,,The 'data obfuscated' role between a user and given data entails that the user is authorized to see particular fields that have been transformed consistently such that statistics performed on those fields would yeild the same results as statistics applied to the un-obfuscated data. The purpose of obfuscation is to prevent related individuals or organizations from being identified.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001792,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,data obfuscated,,,,,,,,,,,,,,,,,,,,,,https://www.hhs.gov/hipaa/for-professionals/privacy/special-topics/de-identification/,,,,,,Damion Dooley,,,,The 'data obfuscated' role between a user and given data entails that the user is authorized to see particular fields that have been transformed consistently such that statistics performed on those fields would yeild the same results as statistics applied to the un-obfuscated data. The purpose of obfuscation is to prevent related individuals or organizations from being identified.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470145,preservation by reducing water activity,,"Preservation method that lowers the water activity (relative humidity) of a food product. This is accomplished by using mechanical dehydration equipment, by natural drying, by adding salt, sugar or other agents to the food or by surface drying during a refrigeration or freezing operation. This method of preservation may be used in conjunction with other preservation methods such as preservation by thermal processing.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0145,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470145,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,preservation by reducing water activity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Preservation method that lowers the water activity (relative humidity) of a food product. This is accomplished by using mechanical dehydration equipment, by natural drying, by adding salt, sugar or other agents to the food or by surface drying during a refrigeration or freezing operation. This method of preservation may be used in conjunction with other preservation methods such as preservation by thermal processing.",,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_58055,Rhinolophidae,,,FALSE,,,,,,,horseshoe bats,,,,,,,,,,,,,,,,,,,Rhinolophidae,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:58055,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Rhinolophidae,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490379,unplasticized polyvinyl chloride container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0379,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490379,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,unplasticized polyvinyl chloride container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490182,aluminum container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0182,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490182,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,aluminum container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490308,steel plate container tinned one side,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0308,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490308,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,steel plate container tinned one side,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_9796,Equus caballus,,,FALSE,,,,,,,horse|equine|domestic horse,,,,,,,,,,,,,,,,,,,Equus caballus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:9796,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Equus caballus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0070527,Borrelia miyamotoi disease,,"A primary bacterial infectious disease that has_material_basis_in Borrelia miyamotoi, which is transmitted_by the blacklegged tick (Ixodes scapularis), the western blacklegged tick (Ixodes pacificus), the taiga tick (Ixodes persulcatus), or the castor bean tick (Ixodes ricinus). The infection has_symptom fever, headache, chills, muscle pain, joint pain, asthenia, fatigue and nausea, and rarely relapses.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0070527,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,Borrelia miyamotoi disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A primary bacterial infectious disease that has_material_basis_in Borrelia miyamotoi, which is transmitted_by the blacklegged tick (Ixodes scapularis), the western blacklegged tick (Ixodes pacificus), the taiga tick (Ixodes persulcatus), or the castor bean tick (Ixodes ricinus). The infection has_symptom fever, headache, chills, muscle pain, joint pain, asthenia, fatigue and nausea, and rarely relapses.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_0070528,cepacia syndrome,,"An opportunistic bacterial infectious disease characterized by necrotizing pneumonia, acute respiratory distress syndrome, and bacteremia that has_material_basis_in Burkholderia cepacia complex, which is transmitted_by contact transmission, droplet spread transmission, vehicle-borne fomite transmission, and vehicle-borne ingestion transmission.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0070528,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,cepacia syndrome,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An opportunistic bacterial infectious disease characterized by necrotizing pneumonia, acute respiratory distress syndrome, and bacteremia that has_material_basis_in Burkholderia cepacia complex, which is transmitted_by contact transmission, droplet spread transmission, vehicle-borne fomite transmission, and vehicle-borne ingestion transmission.",,,,,,,,
http://purl.obolibrary.org/obo/ENVO_03501107,train,,A vehicle which locomotes using rails and consists of a series of connected compartments used to transport passengers or cargo.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:03501107,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,train,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A vehicle which locomotes using rails and consists of a series of connected compartments used to transport passengers or cargo.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0034919,juvenile stage,,The stage of being no more dependent of the nest and/or from caregivers for subsistence while having not reach sexual maturity.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SscrDv:0000005|RnorDv:0000058|PtroDv:0000005|PpanDv:0000005|OariDv:0000005|MmusDv:0000178|MmulDv:0000014|MdomDv:0000005|HsapDv:0000271|GgorDv:0000005|GgalDv:0000005|ChirDv:0000034,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0034919,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,juvenile stage,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The stage of being no more dependent of the nest and/or from caregivers for subsistence while having not reach sexual maturity.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001625,subject disease stage,,"A subject disease stage is a measure of the acuteness of a subject organism's diagnosed disease, if any, at a given time in an investigation, study or specimen extraction event.",FALSE,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0001835,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001625,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,subject disease stage,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"A subject disease stage is a measure of the acuteness of a subject organism's diagnosed disease, if any, at a given time in an investigation, study or specimen extraction event.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510241,monounsaturated fat claim,,COMMISSION REGULATION (EU) No 116/2010 of 9 February 2010 amending Regulation (EC) No 1924/2006 of the European Parliament and of the Council with regard to the list of nutrition claims.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0241,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510241,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,monounsaturated fat claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,COMMISSION REGULATION (EU) No 116/2010 of 9 February 2010 amending Regulation (EC) No 1924/2006 of the European Parliament and of the Council with regard to the list of nutrition claims.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C16960,Patient,patient|Patients|Patient|PT|PATIENT|LAY USER/PATIENT,"A person who receives medical attention, care, or treatment, or who is registered with medical professional or institution with the purpose to receive medical care when necessary.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,patient|Patients|Patient|PT|PATIENT|LAY USER/PATIENT,,,,NCIT:C16960,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Patient,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A person who receives medical attention, care, or treatment, or who is registered with medical professional or institution with the purpose to receive medical care when necessary.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000244,lamb shoulder blade roast (raw),,A raw lamb shoulder blade roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000244,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lamb shoulder blade roast (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw lamb shoulder blade roast.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0000600,Abnormality of the pharynx,,"An anomaly of the pharynx, i.e., of the tubular structure extending from the base of the skull superiorly to the esophageal inlet inferiorly.",FALSE,,,,,,,,,,,,,,"The pharynx is tubular structure extending from base of skull superiorly to esophageal inlet inferiorly, and is composed of three distinct areas: the nasopharynx, the oropharynx, and the hypopharynx, with the pharyngeal walls being composed of the superior, middle, and inferior pharyngeal constrictor muscles. It is part of the digestive system and of the conducting zone of the respiratory system.",,,,,,,,,,,,,,,,,,UMLS:C4025838,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0000600,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormality of the pharynx,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An anomaly of the pharynx, i.e., of the tubular structure extending from the base of the skull superiorly to the esophageal inlet inferiorly.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490137,plastic shrink-pack,,"A thin, transparent plastic film that adheres to the surface and itself, and is used to wrap objects and materials in an air-tight manner.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0137,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490137,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,plastic shrink-pack,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A thin, transparent plastic film that adheres to the surface and itself, and is used to wrap objects and materials in an air-tight manner.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020863,bison sub-primal cut (raw),,A raw bison sub-primal cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020863,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,bison sub-primal cut (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw bison sub-primal cut.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00001283,poultry food product,,A food product that is derived from some poultry.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00001283,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,poultry food product,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A food product that is derived from some poultry.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0035079,deep intraparotid lymph node,intraglandular deep parotid lymph nodes|deep intraparotid node,The intraglandular deep parotid lymph nodes are a group of lymph nodes found inside the parotid gland.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Intraglandular_deep_parotid_lymph_nodes|SCTID:75040000,,,,,,,,,,,,,,,,,,,,,,,,,intraglandular deep parotid lymph nodes|deep intraparotid node,,,,UBERON:0035079,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,deep intraparotid lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The intraglandular deep parotid lymph nodes are a group of lymph nodes found inside the parotid gland.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000219,anthropogenic terrestrial biome,human biome|anthrome,An anthropogenic terrestrial biome is a terrestrial biome which has community structures determined by human activity.,FALSE,,,,,,,,,,,,,,Preliminary definition.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,human biome|anthrome,,,,ENVO:01000219,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,anthropogenic terrestrial biome,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An anthropogenic terrestrial biome is a terrestrial biome which has community structures determined by human activity.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_23953,erythromycins,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:23953,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,erythromycins,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001225,date of conception,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001225,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,date of conception,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ARO_3004302,susceptible antimicrobial phenotype,sensitive,A bacterial strain is said to be susceptible to a given antibiotic when it is inhibited in vitro by a concentration of a drug that is associated with a high likelihood of therapeutic success.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,S,,sensitive,,,,ARO:3004302,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/aro.owl,,,,,,,,,susceptible antimicrobial phenotype,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A bacterial strain is said to be susceptible to a given antibiotic when it is inhibited in vitro by a concentration of a drug that is associated with a high likelihood of therapeutic success.,,,,susceptible,,,,
http://purl.obolibrary.org/obo/ENVO_01001790,terrestrial ecosystem,,An ecosystem which primarily occurs on land.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01001790,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,terrestrial ecosystem,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An ecosystem which primarily occurs on land.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02021293,piece of veal (raw),,A raw piece of veal.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02021293,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of veal (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw piece of veal.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_4251,conjunctival disease,,"An eye disease affecting the conjunctiva, which is the mucous membrane surrounding the eye and interior of the eyelids.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:4251,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,conjunctival disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An eye disease affecting the conjunctiva, which is the mucous membrane surrounding the eye and interior of the eyelids.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000254,lamb leg (raw),,A raw lamb leg.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000254,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lamb leg (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw lamb leg.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100096,secondary strep infection,,"A infection caused by streptococcal bacteria, bearing the secondary infection role",FALSE,,,,,,,,,,,,,,If a secondary streptococcal infection was identified during or after treatment of the primary infection.,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100096,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,secondary strep infection,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A infection caused by streptococcal bacteria, bearing the secondary infection role",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001469,consensus sequence software version,consensus sequence software version,A data field which describes the version of the software used to generate the consensus sequence.,FALSE,,,,,,,PCDS:consensus_sequence_software_version,,,,,,,PCDS: Provide the version of the software used to generate the consensus sequence.,,,,,,,,,,,,,,PCDS: 1.3,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,consensus sequence software version,consensus sequence software version slot,,,,GENEPIO:0001469,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,consensus sequence software version,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the version of the software used to generate the consensus sequence.,,PCDS: The version of the software used to generate the consensus sequence.,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_991915,Escherichia coli O121:H19,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,Escherichia coli O121:H19,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:991915,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Escherichia coli O121:H19,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_991913,Escherichia coli O103:H25,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,Escherichia coli O103:H25,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:991913,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Escherichia coli O103:H25,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_991919,Escherichia coli O145:NM,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,Escherichia coli O145:NM,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:991919,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Escherichia coli O145:NM,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000110,subject health status (GSCID-BRC),,"A description of whether a given subject organism appeared healthy, sick or deceased at the time of specimen extraction. If sick or deceased, additional details should be provided in project-specific fields.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,CS8,,,,,,GENEPIO:0000110,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,subject health status (GSCID-BRC),,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"A description of whether a given subject organism appeared healthy, sick or deceased at the time of specimen extraction. If sick or deceased, additional details should be provided in project-specific fields.",,,"order:
NCIT:C115935 # healthy
NCIT:C25610 # pathologic / diseased
NCIT:C28554 # deceased|depth:1",,,,,
http://purl.obolibrary.org/obo/OBI_0000710,Li-Cor 4300 DNA Analysis System,,is a DNA sequencer which is manufactured by Li-Cor corporation and enable automated chain termination based DNA sequencing,FALSE,,,,,,,,,,,,,,,,,,,,,OBI and Li-Cor,,,,,Li-Cor 4300 DNA Analysis System,,,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0000710,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Li-Cor 4300 DNA Analysis System,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra,,,,is a DNA sequencer which is manufactured by Li-Cor corporation and enable automated chain termination based DNA sequencing,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03480011,packed in edible medium,,Packed in a medium that is also a food product.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=K0011,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03480011,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,packed in edible medium,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Packed in a medium that is also a food product.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03430117,medium ground,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=E0117,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03430117,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,medium ground,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001645,identifier status,,An identifier status describes the principle role of an identifier assigned to an entity by its curator or handler. An entity may have a number of identifiers assigned to it over time.  An identifier may be phased-out as can happen when its content is transferred to another curator.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001645,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,identifier status,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,An identifier status describes the principle role of an identifier assigned to an entity by its curator or handler. An entity may have a number of identifiers assigned to it over time.  An identifier may be phased-out as can happen when its content is transferred to another curator.,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000280,Masa,,A Central African population with a population size of 0.45 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000280,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Masa,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Central African population with a population size of 0.45 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000282,Aka,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000282,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Aka,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000289,Kanembu,,A Kanuri population with a population size of 0.655 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000289,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Kanembu,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Kanuri population with a population size of 0.655 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000287,Twa,,"A Pygmy Eastern, Pygmy Southern, Banyarwanda, Pygmy Central population with a population size of 0.04 million",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000287,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Twa,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A Pygmy Eastern, Pygmy Southern, Banyarwanda, Pygmy Central population with a population size of 0.04 million",,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000283,Baka_Cameroon,,A Pygmy Central population with a population size of 0.03 milion,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000283,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Baka_Cameroon,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Pygmy Central population with a population size of 0.03 milion,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000281,Pygmy Central,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000281,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Pygmy Central,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000284,Mbuti,,A Pygmy Central population with a population size of 0.01 milion,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000284,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Mbuti,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Pygmy Central population with a population size of 0.01 milion,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000285,Efé,,A Pygmy Central population with a population size of 0.07 million,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000285,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Efé,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Pygmy Central population with a population size of 0.07 million,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000286,Sua,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000286,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Sua,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000288,Kwatay,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000288,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Kwatay,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_102484,sulfisoxazole,,A sulfonamide antibacterial with an oxazole substituent. It has antibiotic activity against a wide range of gram-negative and gram-positive organisms.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:9343,,,,,,CHEBI:102484,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,sulfisoxazole,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A sulfonamide antibacterial with an oxazole substituent. It has antibiotic activity against a wide range of gram-negative and gram-positive organisms.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530143,faux-filet,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0143,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530143,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,faux-filet,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100237,mass gathering exposure datum,,A type of social behavior in which a sufficent number of humans gather together such that there is potential strain on community resources.,FALSE,,,,,,,Mass Gathering,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Mass_gathering,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100237,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,mass gathering exposure datum,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A type of social behavior in which a sufficent number of humans gather together such that there is potential strain on community resources.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100188,contact with person with fever and/or cough exposure process,,A process occuring within or in the vicinity of a human with a fever and/or cough that exposes the recipient organism to the causative agent.,FALSE,,,,,,,Contact with Person with Fever and/or Cough,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100188,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,contact with person with fever and/or cough exposure process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A process occuring within or in the vicinity of a human with a fever and/or cough that exposes the recipient organism to the causative agent.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100608,reference sequence length measurement datum,,A sequence length measurement datum which describes the number of base pairs of a reference sequence.,FALSE,,,,,,,,,,,,,,,,,,,,,Emma Griffiths,,,,,reference sequence length measurement datum,,The sequence length measurment datum for the SARS-CoV-2 reference sequence (NC_045512.2) is 29903 bp.,,,ready for release,http://purl.obolibrary.org/obo/OBI_0002887,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100608,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,reference sequence length measurement datum,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-1107-9135,,,https://github.com/obi-ontology/obi/issues/1579,A sequence length measurement datum which describes the number of base pairs of a reference sequence.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490159,paperboard or paper container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0159,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490159,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,paperboard or paper container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/PECO_0007037,spring season exposure,spring season treatment (narrow),An exposure involving growth during the spring season.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,EO:0007037,,,spring season treatment (narrow),,,PECO:0007037,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/peco.owl,,,,,,,,,spring season exposure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An exposure involving growth during the spring season.,,,,,,,,
http://purl.obolibrary.org/obo/PECO_0007034,kharif season exposure,kharif season treatment (narrow),An exposure involving growth during the kharif crop season (May-October) as practised in South Asia.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,EO:0007034,,,kharif season treatment (narrow),,,PECO:0007034,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/peco.owl,,,,,,,,,kharif season exposure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An exposure involving growth during the kharif crop season (May-October) as practised in South Asia.,,,,,,,,
http://purl.obolibrary.org/obo/PECO_0007033,rabi season exposure,rabi season treatment (narrow),An exposure involving growth during the rabi crop season (October-March) as practiced in South Asia.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,EO:0007033,,,rabi season treatment (narrow),,,PECO:0007033,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/peco.owl,,,,,,,,,rabi season exposure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An exposure involving growth during the rabi crop season (October-March) as practiced in South Asia.,,,,,,,,
http://purl.obolibrary.org/obo/PECO_0007036,summer season exposure,summer season treatment (narrow),An exposure involving growth during the summer season.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,EO:0007036,,,summer season treatment (narrow),,,PECO:0007036,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/peco.owl,,,,,,,,,summer season exposure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An exposure involving growth during the summer season.,,,,,,,,
http://purl.obolibrary.org/obo/PECO_0007038,autumn season exposure,autumn season treatment (narrow),An exposure involving growth during the autumn season.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,EO:0007038,,,autumn season treatment (narrow),,,PECO:0007038,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/peco.owl,,,,,,,,,autumn season exposure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An exposure involving growth during the autumn season.,,,,,,,,
http://purl.obolibrary.org/obo/PECO_0007035,winter season exposure,winter season treatment (narrow),An exposure involving growth during the winter season.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,EO:0007035,,,winter season treatment (narrow),,,PECO:0007035,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/peco.owl,,,,,,,,,winter season exposure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An exposure involving growth during the winter season.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_59062,polymyxin,,Polymyxins are antibiotics with a general structure consisting of a cyclic peptide with a long hydrophobic tail. They disrupt the structure of the bacterial cell membrane by interacting with its phospholipids. Polymyxins are produced by the Gram-positive bacterium <em>Bacillus polymyxa</em> and are selectively toxic for Gram-negative bacteria.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:59062,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,polymyxin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Polymyxins are antibiotics with a general structure consisting of a cyclic peptide with a long hydrophobic tail. They disrupt the structure of the bacterial cell membrane by interacting with its phospholipids. Polymyxins are produced by the Gram-positive bacterium <em>Bacillus polymyxa</em> and are selectively toxic for Gram-negative bacteria.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0001882,target material in specimen specification,NCBI BioProject: Material,A plan specification which specifies the type of material that will be assayed in an investigation.,FALSE,,,,,,,,,,,,,,Used in NCBI BioProject specifcation,,,,,,,NIAID GSCID-BRC metadata working group,,,,,target material in specimen specification,,"Some examples of target material are Genome, Purified chromosome, Transcriptome, Phenotype, Proteome.",,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI BioProject: Material,,,,OBI:0001882,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,target material in specimen specification,,,,,,,Target Material,,,,,,,,,,,,,,,,,,,,,"PERSON: Chris Stoeckert, Jie Zheng",,,,A plan specification which specifies the type of material that will be assayed in an investigation.,,,,target material,,,,
http://purl.obolibrary.org/obo/OBI_0002807,disposable footwear cover,,A footwear cover which is designed for a single period of continuous use and then disposed of.,FALSE,,,,,,,,,,,,,,,,,,,,,OBI,,,,,disposable footwear cover,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0002807,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,disposable footwear cover,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://orcid.org/0000-0002-8844-9165,,,https://github.com/obi-ontology/obi/issues/1193,A footwear cover which is designed for a single period of continuous use and then disposed of.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102201,weight for weight,,"A unitless comparison based on weight rather than volume, which is equivalent to per hundred.",FALSE,,,,,,,% w/w,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102201,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2026-04-13T19:52:38.515Z,,,,,,,,,,,,,,,,,,,weight for weight,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A unitless comparison based on weight rather than volume, which is equivalent to per hundred.",,,,,,,,
http://purl.obolibrary.org/obo/IDO_0000573,symptomatic host of infectious agent,,An organism who is host to an infectious agent and has symptoms of the infectious disease associated with the infectious agent,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,IDO:0000573,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ido.owl,,,,,,,,,symptomatic host of infectious agent,,,,,,,,,,,,,,,,,,,,,,,,,,,,Lindsay Cowell|Alexander Diehl|Albert Goldfain,,,,An organism who is host to an infectious agent and has symptoms of the infectious disease associated with the infectious agent,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490406,polyethylene - vinyl copolymer container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0406,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490406,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,polyethylene - vinyl copolymer container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001505,variant evidence details,variant evidence details,A data field which describes the evidence used to make the variant determination.,FALSE,,,,,,,PCDS:variant_evidence_details,,,,,,,"PCDS: List the set of lineage-defining mutations used to make the variant determination. If there are mutations of interest/concern observed in addition to lineage-defining mutations, describe those here.",,,,,,,,,,,,,,"PCDS: Lineage-defining mutations: ORF1ab (K1655N), Spike (K417N, E484K, N501Y, D614G, A701V), N (T205I), E (P71L).",,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,variant evidence details,variant evidence details slot,,,,GENEPIO:0001505,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,variant evidence details,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the evidence used to make the variant determination.,,PCDS: The evidence used to make the variant determination.,,,,,,
http://purl.obolibrary.org/obo/GAZ_00005649,"populated place, Egypt",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00005649,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Egypt",http://purl.obolibrary.org/obo/GAZ_00003934,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00005643,Province (Ecuador),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00005643,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Province (Ecuador),http://purl.obolibrary.org/obo/GAZ_00002912,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ARO_3004393,time-kill test,time kill curve,Allows for time-dependent or concentration-dependent analysis of antimicrobial effects. Several tubes of broth culture medium containing a suspension of the test microbe are treated with varying concentrations of the antimicrobial agent and the percentage of dead cells determined at various time points.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,time kill curve,,,,ARO:3004393,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/aro.owl,,,,,,,,,time-kill test,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Allows for time-dependent or concentration-dependent analysis of antimicrobial effects. Several tubes of broth culture medium containing a suspension of the test microbe are treated with varying concentrations of the antimicrobial agent and the percentage of dead cells determined at various time points.,,,,,,,,
http://purl.obolibrary.org/obo/OBA_2050355,age of onset of diverticulitis,age diverticulitis symptoms begin|age at onset of diverticulitis,The age at which diverticulitis manifestations first appear.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,age diverticulitis symptoms begin|age at onset of diverticulitis,,,,OBA:2050355,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age of onset of diverticulitis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The age at which diverticulitis manifestations first appear.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000253,freshwater river biome,,A freshwater biome which is determined by a freshwater river.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01000253,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,freshwater river biome,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A freshwater biome which is determined by a freshwater river.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001981,EST strategy,,Single pass sequencing of cDNA templates,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI SRA: EST,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001981,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,EST strategy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Single pass sequencing of cDNA templates,,,,,,,,
http://www.ebi.ac.uk/efo/EFO_0010162,death in childhood,,"Death in during childhood, defined here as between the ages of 2 and 10 years.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C1843392,,,,,,,,,,,,,,,,,,,,,,,,,,,,,efo:EFO_0010162,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,death in childhood,,,,,,,,,,,,,,,,,,,,,,,,,,,,Baron Koylass,,,,"Death in during childhood, defined here as between the ages of 2 and 10 years.",,,,,,,,
http://purl.obolibrary.org/obo/BTO_0001911,lung adenocarcinoma cell line,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,BTO:0001911,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/bto.owl,,,,,,,,,lung adenocarcinoma cell line,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000964,industrial wastewater,,Wastewater which is produced by industrial activity and which contains chemical contaminants other than those associated with urine and fecal matter.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01000964,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,industrial wastewater,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wastewater which is produced by industrial activity and which contains chemical contaminants other than those associated with urine and fecal matter.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0682,Surui in Brazil (SGDP),Surui,A population made up of 2 samples from Surui individuals recruited in Brazil as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Latin or Admixed American.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Surui,,,,HANCESTRO:0682,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Surui in Brazil (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Surui individuals recruited in Brazil as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Latin or Admixed American.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0687,Puerto Rican in Puerto Rico (1KGP),Puerto Rican|PUR,A population made up of 150 samples from Puerto Rican individuals recruited in Puerto Rico as part of the 1000 Genomes Project. The population was assigned by the collecting project to the superpopulation Latin or Admixed American.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Puerto Rican|PUR,,,,HANCESTRO:0687,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Puerto Rican in Puerto Rico (1KGP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 150 samples from Puerto Rican individuals recruited in Puerto Rico as part of the 1000 Genomes Project. The population was assigned by the collecting project to the superpopulation Latin or Admixed American.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0688,Aleut in Russia (SGDP),Aleut,A population made up of 2 samples from Aleut individuals recruited in Russia as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Central Asian and Siberian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Aleut,,,,HANCESTRO:0688,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Aleut in Russia (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Aleut individuals recruited in Russia as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Central Asian and Siberian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0681,Quechua in Peru (SGDP),Quechua,A population made up of 3 samples from Quechua individuals recruited in Peru as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Latin or Admixed American.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Quechua,,,,HANCESTRO:0681,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Quechua in Peru (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 3 samples from Quechua individuals recruited in Peru as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Latin or Admixed American.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0683,Zapotec in Mexico (SGDP),Zapotec,A population made up of 2 samples from Zapotec individuals recruited in Mexico as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Latin or Admixed American.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Zapotec,,,,HANCESTRO:0683,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Zapotec in Mexico (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Zapotec individuals recruited in Mexico as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Latin or Admixed American.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0684,"Colombian in Medellin, Colombia (1KGP)",Colombian|CLM,"A population made up of 148 samples from Colombian individuals recruited in Medellin, Colombia as part of the 1000 Genomes Project. The population was assigned by the collecting project to the superpopulation Latin or Admixed American.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Colombian|CLM,,,,HANCESTRO:0684,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,"Colombian in Medellin, Colombia (1KGP)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A population made up of 148 samples from Colombian individuals recruited in Medellin, Colombia as part of the 1000 Genomes Project. The population was assigned by the collecting project to the superpopulation Latin or Admixed American.",,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0680,Pima in Mexico (SGDP),Pima,A population made up of 2 samples from Pima individuals recruited in Mexico as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Latin or Admixed American.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Pima,,,,HANCESTRO:0680,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Pima in Mexico (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Pima individuals recruited in Mexico as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Latin or Admixed American.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0685,"Mexican Ancestry in Los Angeles, California (1KGP)",Mexican Ancestry|MXL,"A population made up of 107 samples from Mexican Ancestry individuals recruited in Los Angeles, California as part of the 1000 Genomes Project. The population was assigned by the collecting project to the superpopulation Latin or Admixed American.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Mexican Ancestry|MXL,,,,HANCESTRO:0685,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,"Mexican Ancestry in Los Angeles, California (1KGP)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A population made up of 107 samples from Mexican Ancestry individuals recruited in Los Angeles, California as part of the 1000 Genomes Project. The population was assigned by the collecting project to the superpopulation Latin or Admixed American.",,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0689,Altaian in Russia (SGDP),Altaian,A population made up of 1 samples from Altaian individuals recruited in Russia as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Central Asian and Siberian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Altaian,,,,HANCESTRO:0689,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Altaian in Russia (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 1 samples from Altaian individuals recruited in Russia as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Central Asian and Siberian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0686,"Peruvian in Lima, Peru (1KGP)",Peruvian|PEL,"A population made up of 130 samples from Peruvian individuals recruited in Lima, Peru as part of the 1000 Genomes Project. The population was assigned by the collecting project to the superpopulation Latin or Admixed American.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Peruvian|PEL,,,,HANCESTRO:0686,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,"Peruvian in Lima, Peru (1KGP)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A population made up of 130 samples from Peruvian individuals recruited in Lima, Peru as part of the 1000 Genomes Project. The population was assigned by the collecting project to the superpopulation Latin or Admixed American.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_51026,macrocycle,,A cyclic compound containing nine or more atoms as part of the cyclic system.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:51026,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,macrocycle,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A cyclic compound containing nine or more atoms as part of the cyclic system.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530128,poitrine,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0128,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530128,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,poitrine,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000215,beef ribeye fillet,,A smaller ribeye steak,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000215,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef ribeye fillet,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A smaller ribeye steak,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0002786,personal protective device,,A device which is a wearable garment designed to protect the wearer's body from injury or infection.,FALSE,,,,,,,personal protective equipment|PPE,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Personal_protective_equipment,,,,,personal protective device,,"PPE is equipment worn by a worker to minimize exposure to specific hazards.|Examples of PPE include respirators, gloves, aprons, fall protection, and full body suits, as well as head, eye and foot protection.",,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0002786,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,personal protective device,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://orcid.org/0000-0002-8844-9165,,,https://github.com/obi-ontology/obi/issues/1193,A device which is a wearable garment designed to protect the wearer's body from injury or infection.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_11337,Lemierre's syndrome,,"A commensal bacterial infectious disease that is characterized by systemic sepsis, ulcerative or necrotic lesions and multisystem abscesses caused by Fusobacterium necrophorum. The disease often first presents as a severe tonsillitis or pharyngitis with high-grade fever and chills together with leukocytosis, cervical pain and neck swelling.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:11337,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,Lemierre's syndrome,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A commensal bacterial infectious disease that is characterized by systemic sepsis, ulcerative or necrotic lesions and multisystem abscesses caused by Fusobacterium necrophorum. The disease often first presents as a severe tonsillitis or pharyngitis with high-grade fever and chills together with leukocytosis, cervical pain and neck swelling.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_11336,rhinoscleroma,,"A primary bacterial infectious disease that involves the inflammation of mucosa lining the nasal cavity, pharynx, larynx, trachea and bronchi that is characterized by the formation of granulomas, dense induration of the tissues and nodular deformity caused by Klebsiella rhinoscleromatis.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:11336,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,rhinoscleroma,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A primary bacterial infectious disease that involves the inflammation of mucosa lining the nasal cavity, pharynx, larynx, trachea and bronchi that is characterized by the formation of granulomas, dense induration of the tissues and nodular deformity caused by Klebsiella rhinoscleromatis.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_11338,tetanus,,"A primary bacterial infectious disease that results in prolonged contraction of skeletal muscle fibers, has_material_basis_in Clostridium tetani, which produces tetanospasmin, a neurotoxin, which is carried to the brain and spinal cord, where it binds irreversibly to receptors inhibiting neurotransmission. Damaged upper motor neurons cannot control reflex responses to afferent sensory stimuli.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:11338,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,tetanus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A primary bacterial infectious disease that results in prolonged contraction of skeletal muscle fibers, has_material_basis_in Clostridium tetani, which produces tetanospasmin, a neurotoxin, which is carried to the brain and spinal cord, where it binds irreversibly to receptors inhibiting neurotransmission. Damaged upper motor neurons cannot control reflex responses to afferent sensory stimuli.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_6633,Mafenide,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:6633,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,Mafenide,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100923,endogenous control details,endogenous control details,A data field which describes the description of the endogenous controls included when extracting a sample.,FALSE,,,,,,,PCDS:endogenous_control_details,,,,,,,"PCDS: Provide the names of endogenous controls that were used as a reference during extraction. If relevant, include titers of these controls, as well as whether any controls were expected but not identified in the sample.",,,,,,,,,,,Drafted 2023-07-27,,,PCDS: Pepper Mild Mottle Virus (PMMV),,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,endogenous control details,endogenous control details slot,,,,GENEPIO:0100923,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,endogenous control details,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the description of the endogenous controls included when extracting a sample.,,PCDS: The description of the endogenous controls included when extracting a sample.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001436,prior sarscov2 infection isolate ID,prior SARS-CoV-2 infection isolate,A data field which describes the identifier of the isolate found in the prior Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection.,FALSE,,,,,,,PCDS:prior_sarscov2_infection_isolate,,,,,,,PCDS: Provide the isolate name of the most recent prior infection. Structure the 'isolate' name to be ICTV/INSDC compliant in the following format: 'SARS-CoV-2/host/country/sampleID/date'.,,,,,,,,,,,,,,PCDS: SARS-CoV-2/human/USA/CA-CDPH-001/2020,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,prior SARS-CoV-2 infection isolate,prior SARS-CoV-2 infection isolate identifier slot|prior SARS-CoV-2 infection isolate identifier field|prior SARS-CoV-2 infection isolate ID slot,,,,GENEPIO:0001436,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,prior sarscov2 infection isolate ID,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the identifier of the isolate found in the prior Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection.,,PCDS: The identifier of the isolate found in the prior SARS-CoV-2 infection.,,,,,,
http://purl.obolibrary.org/obo/MONDO_0100163,COVID-19–associated multisystem inflammatory syndrome in children,pediatric multisystem inflammatory syndrome|pediatric multi-system inflammatory syndrome potentially associated with COVID-19|pediatric inflammatory multisystem syndrome: temporally associated with SARS-CoV-2|pediatric inflammatory multisystem syndrome temporally associated with SARS-CoV-2|pediatric inflammatory multisystem syndrome|paediatric multisystem inflammatory syndrome|paediatric multi-system inflammatory syndrome potentially associated with COVID-19|paediatric inflammatory multisystem syndrome: temporally associated with SARS-CoV-2|paediatric inflammatory multisystem syndrome temporally associated with SARS-CoV-2|paediatric inflammatory multisystem syndrome|multisystem inflammatory syndrome in children associated with coronavirus disease 2019|multisystem inflammatory syndrome in children associated with COVID-19|multisystem inflammatory syndrome in children|SARS-CoV-2 Kawasaki-like syndrome|PMIS|PIMS-TS|PIMS|MIS-C|COVID-19 associated multisystem inflammatory syndrome in children|COVID-19 Kawasaki-like syndrome|COVID-19 -related pediatric inflammatory multisystem syndrome|COVID-19 -related paediatric inflammatory multisystem syndrome,"A inflammatory syndrome in children infected by the SARS-CoV-2 with similarities to Kawasaki disease. Clinical manifestations range from fever and inflammation to myocardial injury, shock, and development of coronary artery aneurysms.",FALSE,,,,,,,,,,,,,,"The clinical presentation of MIS-C includes fever, severe illness, and the involvement of two or more organ systems, in combination with laboratory evidence of inflammation and laboratory or epidemiologic evidence of SARS-CoV-2 infection. Some features of MIS-C resemble Kawasaki Disease, toxic shock syndrome, and secondary hemophagocytic lymphohistiocytosis/macrophage activation syndrome.",,,,,,,,,,,,,,,,,,NCIT:C172127|GARD:0026069|DOID:0080711,,,,,,,,,,,,,,,,,,,,,,,,,pediatric multisystem inflammatory syndrome|pediatric multi-system inflammatory syndrome potentially associated with COVID-19|pediatric inflammatory multisystem syndrome: temporally associated with SARS-CoV-2|pediatric inflammatory multisystem syndrome temporally associated with SARS-CoV-2|pediatric inflammatory multisystem syndrome|paediatric multisystem inflammatory syndrome|paediatric multi-system inflammatory syndrome potentially associated with COVID-19|paediatric inflammatory multisystem syndrome: temporally associated with SARS-CoV-2|paediatric inflammatory multisystem syndrome temporally associated with SARS-CoV-2|paediatric inflammatory multisystem syndrome|multisystem inflammatory syndrome in children associated with coronavirus disease 2019|multisystem inflammatory syndrome in children associated with COVID-19|multisystem inflammatory syndrome in children|SARS-CoV-2 Kawasaki-like syndrome|PMIS|PIMS-TS|PIMS|MIS-C|COVID-19 associated multisystem inflammatory syndrome in children|COVID-19 Kawasaki-like syndrome|COVID-19 -related pediatric inflammatory multisystem syndrome|COVID-19 -related paediatric inflammatory multisystem syndrome,,,,MONDO:0100163,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#rare|http://purl.oboInOwllibrary.org/oboInOwl/mondo#gard_rare,,,,,,,,COVID-19–associated multisystem inflammatory syndrome in children,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A inflammatory syndrome in children infected by the SARS-CoV-2 with similarities to Kawasaki disease. Clinical manifestations range from fever and inflammation to myocardial injury, shock, and development of coronary artery aneurysms.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100119,obsolete: Illumina HiSeq 4000,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,Rehomed in OBI,,,,,,,,,,,,,,,,,,,GENEPIO:0100119,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: Illumina HiSeq 4000,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/OBI_0002049,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530126,hampe,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0126,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530126,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,hampe,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_01000047,Neotropical Kingdom,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:01000047,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Neotropical Kingdom,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C168970,Death due to Disease Progression,Terminal Disease Progression|Disease Progression|Death due to Disease Progression,An indication that the subject has died due to the progression of their disease.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Terminal Disease Progression|Disease Progression|Death due to Disease Progression,,,,NCIT:C168970,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Death due to Disease Progression,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An indication that the subject has died due to the progression of their disease.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001597,sequence variation project objective,,Variation: identification of sequence variation data for submission to dbSNP or dbVAR,FALSE,,,,,,,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/books/NBK54364/,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001597,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,sequence variation project objective,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,Variation: identification of sequence variation data for submission to dbSNP or dbVAR,,,,sequence variation,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001435,prior sarscov2 infection status,prior SARS-CoV-2 infection,A data field which describes whether there was prior Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection.,FALSE,,,,,,,PCDS:prior_sarscov2_infection,,,,,,,PCDS: Whether there was prior SARS-CoV-2 infection.,,,,,,,,,,,,,,"PCDS: If known, provide information about whether the individual had a previous SARS-CoV-2 infection. Select a value from the pick list.",,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,prior SARS-CoV-2 infection,prior SARS-CoV-2 infection slot,,,,GENEPIO:0001435,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,prior sarscov2 infection status,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes whether there was prior Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection.,,PCDS: Whether there was prior SARS-CoV-2 infection.,,,,,,
http://purl.obolibrary.org/obo/ARO_3004388,in-vitro microbial susceptibility test,,"An experimental test conducted outside of a living organism, usually in a tube or plate.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ARO:3004388,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/aro.owl,,,,,,,,,in-vitro microbial susceptibility test,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An experimental test conducted outside of a living organism, usually in a tube or plate.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001394,host age bin,host age bin,A host data field which describes the age category of the host at the time of sampling.,FALSE,,,,,,,PCDS:host_age_bin,,,,,,,"PCDS: Select the corresponding host age bin from the pick list provided in the template. If not available, provide a null value.",,,,,,,,,,,,,,PCDS: 60 - 69,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,host age bin,host age bin slot,,,,GENEPIO:0001394,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,host age bin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A host data field which describes the age category of the host at the time of sampling.,,PCDS: The age category of the host at the time of sampling.,,,,,,
http://purl.obolibrary.org/obo/HP_0002615,Hypotension,Low blood pressure|Arterial hypotension,"Low Blood Pressure, vascular hypotension.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0020649|SNOMEDCT_US:45007003,,,,,,,,,,,,,,,,,,,,,,,HP:0006701|HP:0005127,,Low blood pressure|Arterial hypotension,,,,HP:0002615,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Hypotension,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Low Blood Pressure, vascular hypotension.",,,,,,,,
http://purl.obolibrary.org/obo/OBI_0001889,specimen provider principal investigator,,A person who is a principal investigator and provides the specimen|A person who is a principal investigator and provides the specimen,FALSE,,,,,,,,,,,,,,,,,,,,,NIAID GSCID-BRC metadata working group,,,,,specimen provider principal investigator,,,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0001889,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/obi.owl,,,,,,,,,specimen provider principal investigator,,,,,,,Sample Provider Principal Investigator (PI) Name,,,,,,,,,,,,,,,,,,,,,"PERSON: Chris Stoeckert, Jie Zheng",,,,A person who is a principal investigator and provides the specimen|A person who is a principal investigator and provides the specimen,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0000740,material sample role,,A material sample role is a specimen role borne by a material entity that is the output of a material sampling process.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,7/13/09: Note that this is a relational role: between the sample taken and the 'sampled' material of which the sample is thought to be representative off.,material sample role,,a role borne by a portion of blood taken to represent all the blood in an organism; the role borne by a population of humans with HIV enrolled in a study taken to represent patients with HIV in general.,,,http://purl.obolibrary.org/obo/IAO_0000125,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0000740,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,material sample role,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://github.com/obi-ontology/obi/issues/1013,A material sample role is a specimen role borne by a material entity that is the output of a material sampling process.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002683,Ion Torrent platform,,A sequencing platform provided by the Ion Torrent company.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002683,,,,,,,,,,,,,,2020-04-24T22:54:06Z,,,,,,,,,,,,,,,,,,,Ion Torrent platform,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://orcid.org/0000-0002-8844-9165,,,,A sequencing platform provided by the Ion Torrent company.,,,,,,,,
http://purl.obolibrary.org/obo/UO_1000210,colony forming unit based unit,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:1000210,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,colony forming unit based unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UO_1000213,colony forming unit per milliliter based unit,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:1000213,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,colony forming unit per milliliter based unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UO_1000218,volt based unit,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:1000218,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,volt based unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001681,laboratory sequencing datum,,A datum related to the sequencing assay process applied to an isolate.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001681,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,laboratory sequencing datum,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/OBI_0400103|http://purl.obolibrary.org/obo/OBI_0001901,,,,,,Damion Dooley,,,,A datum related to the sequencing assay process applied to an isolate.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_26144,piperazines,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:26144,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,piperazines,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000232,number of PCR cycle,,"number of PCR cycle is a count which enumerates how many iterations of 'annealing, renaturation, amplification,' rounds (or cycles) are performed during a polymerase chain reaction (PCR) or an assay relying on PCR.",FALSE,,,,,,,,,,,,,,,,,,,,,"adapted from various sources including:

http://www.ncbi.nlm.nih.gov/genome/probe/doc/TechQPCR.shtml",,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000125,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000232,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,number of PCR cycle,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra|Alejandra Gonzalez-Beltran|Orlaith Burke,,,,"number of PCR cycle is a count which enumerates how many iterations of 'annealing, renaturation, amplification,' rounds (or cycles) are performed during a polymerase chain reaction (PCR) or an assay relying on PCR.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_46634,carbapenemcarboxylic acid,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:46634,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,carbapenemcarboxylic acid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000300,dimensionless ratio,,A ratio where the numerator and denominator are expressed in the same unit.,FALSE,,,,,,,,,,,,,,,,,,,,,STATO,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000300,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,dimensionless ratio,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra|Orlaith Burke|Alejandra Gonzalez-Beltran,,,,A ratio where the numerator and denominator are expressed in the same unit.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0037560,superficial axillary lymph node,axillary node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:12771,,,,,,,,,,,,,,,,,,,,,,,,axillary node,,,,,UBERON:0037560,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,superficial axillary lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0037566,diaphragmatic lymph node,diaphragmatic node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:12773,,,,,,,,,,,,,,,,,,,,,,,,,diaphragmatic node,,,,UBERON:0037566,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,diaphragmatic lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002090,draft sequence repository data - sequencing quality control,,Measurements or calculated quantities used to assess the extent and success of the sequence assembly process. Metric thresholds are species-specific.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002090,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,draft sequence repository data - sequencing quality control,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,Measurements or calculated quantities used to assess the extent and success of the sequence assembly process. Metric thresholds are species-specific.,,,"order:
OBI:0001941 # N50
GENEPIO_0000092 # sequencing depth / read coverage",,,,,
http://purl.obolibrary.org/obo/CHEBI_23003,carbamate ester,,Any ester of carbamic acid or its <em>N</em>-substituted derivatives.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:23003,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,carbamate ester,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any ester of carbamic acid or its <em>N</em>-substituted derivatives.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100267,relative role,,A role inhering in a person that is realized when the bearer is a relative of the case.,FALSE,,,,,,,Relative of case,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100267,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,relative role,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A role inhering in a person that is realized when the bearer is a relative of the case.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000161,beef bottom sirloin butt,,A beef sub-primal cut that is the lower portion of the sirloin section of the loin that contains three muscles that vary in tenderness.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000161,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef bottom sirloin butt,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A beef sub-primal cut that is the lower portion of the sirloin section of the loin that contains three muscles that vary in tenderness.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02010116,piece of animal meat (with bone),,A piece of animal meat that contains bone material.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02010116,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of animal meat (with bone),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A piece of animal meat that contains bone material.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0000104,life cycle,lifespan|life|entire lifespan|entire life cycle,"An entire span of an organism's life. In metazoans, commences with the zygote stage and ends with the death of the organism.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ncithesaurus:Life|SscrDv:0000001|SsalDv:0000001|RnorDv:0000001|PtroDv:0000001|PpanDv:0000001|OcunDv:0000001|OariDv:0000001|OanaDv:0000001|OGES:000011|MmusDv:0000001|MmulDv:0000001|MdomDv:0000001|HsapDv:0000001|GgorDv:0000001|GgalDv:0000001|FcatDv:0000001|FBdv:00000000|EcabDv:0000001|DsimDv:0000001|DpseDv:0000001|CporDv:0000001|ChirDv:0000001|CfamDv:0000001|BtauDv:0000001|AcarDv:0000001,,,,,,,,,,,,,,,,,,,,,,,,,lifespan|life|entire lifespan|entire life cycle,,,,UBERON:0000104,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,life cycle,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An entire span of an organism's life. In metazoans, commences with the zygote stage and ends with the death of the organism.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0000105,life cycle stage,stage|developmental stage,A spatiotemporal region encompassing some part of the life cycle of an organism.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ncithesaurus:Developmental_Stage|ZFS:0100000|ZFS:0000000|XAO:1000000|WBls:0000002|SscrDv:0000000|SsalDv:0000000|RnorDv:0000000|PtroDv:0000000|PpanDv:0000000|PdumDv:0000090|OcunDv:0000000|OariDv:0000000|OanaDv:0000000|MmusDv:0000000|MmulDv:0000000|MdomDv:0000000|MESH:D008018|HsapDv:0000000|GgorDv:0000000|GgalDv:0000000|FcatDv:0000000|FMA:24120|FBdv:00007012|EcabDv:0000000|EFO:0000399|DsimDv:0000000|DpseDv:0000000|CporDv:0000000|ChirDv:0000000|CfamDv:0000000|BtauDv:0000000|BILS:0000105|AcarDv:0000000,,,,,,,,,,,,,,,,,,,,,,,,,,stage|developmental stage,,,UBERON:0000105,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,life cycle stage,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A spatiotemporal region encompassing some part of the life cycle of an organism.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100086,neurogenic pulmonary edema,NPE,A clinical syndrome characterized by the acute onset of pulmonary edema following a significant central nervous system (CNS) insult.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,NPE,,,,GENEPIO:0100086,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,neurogenic pulmonary edema,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A clinical syndrome characterized by the acute onset of pulmonary edema following a significant central nervous system (CNS) insult.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001444,human general activity,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001444,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,human general activity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490380,plasticized polyvinyl chloride container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0380,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490380,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,plasticized polyvinyl chloride container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_11990,ulceroglandular tularemia,,A tularemia that results_in painful regional lymphadenopathy and an ulcerated skin lesion.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:11990,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,ulceroglandular tularemia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A tularemia that results_in painful regional lymphadenopathy and an ulcerated skin lesion.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_50199,pefloxacin,,"A quinolone that is 4-oxo-1,4-dihydroquinoline which is substituted at positions 1, 3, 6 and 7 by ethyl, carboxy, fluorine, and 4-methylpiperazin-1-yl groups, respectively.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:50199,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,pefloxacin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A quinolone that is 4-oxo-1,4-dihydroquinoline which is substituted at positions 1, 3, 6 and 7 by ethyl, carboxy, fluorine, and 4-methylpiperazin-1-yl groups, respectively.",,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00003990,South Georgia and South Sandwich Islands,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,INSDC:country:south georgia and the south sandwich islands,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00003990,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,South Georgia and South Sandwich Islands,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02021752,butchery cut of pork,,A piece of pork meat which has been cut according to butchery practice.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02021752,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,butchery cut of pork,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A piece of pork meat which has been cut according to butchery practice.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000992,shower fixture,,A plumbing fixture within which a human or other animal may bathe under a spray of water.,FALSE,,,,,,,,,,,,,,"Indoors, there is a drain in the floor. Most showers have temperature, spray pressure and adjustable showerhead nozzle. Showering is common in Western culture due to the efficiency of using it compared with a bathtub. Its use in hygiene is, therefore, common practice. A shower uses less water on average than a bath: 80 litres for a shower compared with 150 litres for a bath.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01000992,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,shower fixture,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A plumbing fixture within which a human or other animal may bathe under a spray of water.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0100738,Abnormal eating behavior,Abnormal eating behaviour|Abnormal eating behavior,"Abnormal eating habits involve excessive or insufficient consumption of food, or any other abnormal pattern of food consumption.",FALSE,,,,,,,,,,,,,,Please note that this HPO term refers to an abnormal eating habit but does not directly refer to an eating disorder. An eating disorder is a psychological disorder characterized by one or more abnormal eating behaviors.,,,,,,,,,,,,,,,,,,UMLS:C4021982,,,,,,,,,,,,,,,,,,,,,,,,,Abnormal eating behaviour|Abnormal eating behavior,,,,HP:0100738,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal eating behavior,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Abnormal eating habits involve excessive or insufficient consumption of food, or any other abnormal pattern of food consumption.",,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00005916,Territory of the Cocos (Keeling) Islands,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00005916,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Territory of the Cocos (Keeling) Islands,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00005917,Coral Sea Islands Territory,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,INSDC:country:coral sea islands,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00005917,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Coral Sea Islands Territory,http://purl.obolibrary.org/obo/GAZ_00008996,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00005910,"Territory, Antarctica",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00005910,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Territory, Antarctica",http://purl.obolibrary.org/obo/GAZ_00000462,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00005918,Heard Island and McDonald Islands Territory,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00005918,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Heard Island and McDonald Islands Territory,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00005914,Territory of Christmas Island,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00005914,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Territory of Christmas Island,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001752,clone end data capture,,CloneEnds: capturing clone end data.,FALSE,,,,,,,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/books/NBK54364/,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001752,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,clone end data capture,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,CloneEnds: capturing clone end data.,,,,clone ends,,,,
http://purl.obolibrary.org/obo/FOODON_00005395,lamb flap,,"A sub-primal cut from the lamb's breast that is taken from the lower belly area, near the breast and ribs.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00005395,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lamb flap,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A sub-primal cut from the lamb's breast that is taken from the lower belly area, near the breast and ribs.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_63607,linezolid,,"An organofluorine compound that consists of 1,3-oxazolidin-2-one bearing an <em>N</em>-3-fluoro-4-(morpholin-4-yl)phenyl group as well as an acetamidomethyl group at position 5. A synthetic antibacterial agent that inhibits bacterial protein synthesis by binding to a site on 23S ribosomal RNA of the 50S subunit and prevents further formation of a functional 70S initiation complex.",FALSE,,,,,,,Lzd,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:6477,,,,,,CHEBI:63607,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,linezolid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An organofluorine compound that consists of 1,3-oxazolidin-2-one bearing an <em>N</em>-3-fluoro-4-(morpholin-4-yl)phenyl group as well as an acetamidomethyl group at position 5. A synthetic antibacterial agent that inhibits bacterial protein synthesis by binding to a site on 23S ribosomal RNA of the 50S subunit and prevents further formation of a functional 70S initiation complex.",,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0020683,acute disease,"disease, acute|acute diseases|acute disease",Disease having a short and relatively severe course.,FALSE,,,,,,,,,,,,,,"This term is scheduled for obsoletion based on the fact that it is a grouping class. After obsoletion, this term will not have a replacement ID, but one could consider the following term: -",,,,,,,,,,,,,,,,,,UMLS:C0001314|SCTID:2704003|MESH:D000208|MEDGEN:1738|ICD9:799.89,,,,,,,,,,,,,,,,,,,,,,,,,"disease, acute|acute diseases|acute disease",,,,MONDO:0020683,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#obsoletion_candidate,,,,,,,,acute disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Disease having a short and relatively severe course.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0050398,Carrion's disease,,"A bartonellosis that results_in infection located_in endothelial cells or located_in red blood cells, has_material_basis_in Bartonella bacilliformis, which is transmitted_by sandflies of genus Lutzomyia. The infection has acute and chronic phases. The acute phase is characterized by severe hemolytic anemia and transient immunosuppression. The chronic phase is characterized by verruga peruana lesions which may ulcerate and bleed.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0050398,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,Carrion's disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A bartonellosis that results_in infection located_in endothelial cells or located_in red blood cells, has_material_basis_in Bartonella bacilliformis, which is transmitted_by sandflies of genus Lutzomyia. The infection has acute and chronic phases. The acute phase is characterized by severe hemolytic anemia and transient immunosuppression. The chronic phase is characterized by verruga peruana lesions which may ulcerate and bleed.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001499,lab test result date,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001499,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,lab test result date,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HP_0003470,Paralysis,Paralysis|Inability to move,"Paralysis of voluntary muscles means loss of contraction due to interruption of one or more motor pathways from the brain to the muscle fibers. Although the word paralysis is often used interchangeably to mean either complete or partial loss of muscle strength, it is preferable to use paralysis or plegia for complete or severe loss of muscle strength, and paresis for partial or slight loss. Motor paralysis results from deficits of the upper motor neurons (corticospinal, corticobulbar, or subcorticospinal). Motor paralysis is often accompanied by an impairment in the facility of movement.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0522224|SNOMEDCT_US:44695005,,,,,,,,,,,,,,,,,,,,,,,,,Paralysis|Inability to move,,,,HP:0003470,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Paralysis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Paralysis of voluntary muscles means loss of contraction due to interruption of one or more motor pathways from the brain to the muscle fibers. Although the word paralysis is often used interchangeably to mean either complete or partial loss of muscle strength, it is preferable to use paralysis or plegia for complete or severe loss of muscle strength, and paresis for partial or slight loss. Motor paralysis results from deficits of the upper motor neurons (corticospinal, corticobulbar, or subcorticospinal). Motor paralysis is often accompanied by an impairment in the facility of movement.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_0050829,pericardium disease,,A cardiovascular system disease that is located_in the fibrous sac surrounding the heart.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0050829,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,pericardium disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A cardiovascular system disease that is located_in the fibrous sac surrounding the heart.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0050825,endocardium disease,,A heart disease that is located_in the innermost layer of tissue that lines the chambers of the heart.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0050825,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,endocardium disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A heart disease that is located_in the innermost layer of tissue that lines the chambers of the heart.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C62574,Facility,Facility,Services and space and equipment provided for a particular purpose; a building or place that provides a particular service or is used for a particular industry.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Facility,,,,NCIT:C62574,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Facility,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Services and space and equipment provided for a particular purpose; a building or place that provides a particular service or is used for a particular industry.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0000924,Abnormality of the skeletal system,Skeletal anomalies|Skeletal abnormalities|Abnormality of the skeletal system,An abnormality of the skeletal system.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4021790,,,,,,,,,,,,,,,,,,,,,,,,,Skeletal anomalies|Skeletal abnormalities|Abnormality of the skeletal system,,,,HP:0000924,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormality of the skeletal system,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An abnormality of the skeletal system.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002128,investigation identifier specification,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002128,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,investigation identifier specification,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/OBI_0001628,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0050117,disease by infectious agent,,"A disease that is the consequence of the presence of pathogenic microbial agents, including pathogenic viruses, pathogenic bacteria, fungi, protozoa, multicellular parasites, and aberrant proteins known as prions.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0050117,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,disease by infectious agent,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A disease that is the consequence of the presence of pathogenic microbial agents, including pathogenic viruses, pathogenic bacteria, fungi, protozoa, multicellular parasites, and aberrant proteins known as prions.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001962,cDNA method,,PolyA selection or enrichment for messenger RNA (mRNA). complementary DNA.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI SRA: cDNA,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001962,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,cDNA method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PolyA selection or enrichment for messenger RNA (mRNA). complementary DNA.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530133,jumeau,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0133,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530133,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,jumeau,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0005814,intestinal cancer,"malignant tumour of the intestine|malignant tumour of intestine|malignant tumor of the intestine|malignant tumor of intestine|malignant neoplasm of the intestine|malignant neoplasm of intestine|malignant intestine tumour|malignant intestine tumor|malignant intestine neoplasm|malignant intestinal tumours|malignant intestinal tumour|malignant intestinal tumors|malignant intestinal tumor|malignant intestinal neoplasms|malignant intestinal neoplasm|intestine cancer|intestinal tumors, malignant|intestinal neoplasms, malignant|intestinal cancer|cancer of the intestine|cancer of intestine|bowel cancer",A malignant neoplasm involving the intestine,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,icd11.foundation:150210507|UMLS:C0346627|SCTID:363508008|NCIT:C4572|MESH:D007414|MEDGEN:87562|ICD9:159.0|EFO:0007330|DOID:10155,,,,,,,,,,,,,,,,,,,,,,,,,"malignant tumour of the intestine|malignant tumour of intestine|malignant tumor of the intestine|malignant tumor of intestine|malignant neoplasm of the intestine|malignant neoplasm of intestine|malignant intestine tumour|malignant intestine tumor|malignant intestine neoplasm|malignant intestinal tumours|malignant intestinal tumour|malignant intestinal tumors|malignant intestinal tumor|malignant intestinal neoplasms|malignant intestinal neoplasm|intestine cancer|intestinal tumors, malignant|intestinal neoplasms, malignant|intestinal cancer|cancer of the intestine|cancer of intestine|bowel cancer",,,,MONDO:0005814,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,intestinal cancer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A malignant neoplasm involving the intestine,,,,,,,,
http://purl.obolibrary.org/obo/ARO_3004394,ATP bioluminescence assay,,Relies on the indirect measurement of microbe populations by quantifying microbial ATP production.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ARO:3004394,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/aro.owl,,,,,,,,,ATP bioluminescence assay,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Relies on the indirect measurement of microbe populations by quantifying microbial ATP production.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00002794,Jervis Bay Territory,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00002794,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Jervis Bay Territory,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03460162,calcium added claim,,A claim that calcium has been added to an edible product.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=H0162,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03460162,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,calcium added claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A claim that calcium has been added to an edible product.,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000442,Isoko,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000442,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Isoko,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000440,Bamileke,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000440,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Bamileke,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000443,Kru,,"A Pygmy Central, Western African population with a population size of 6.8 millions",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000443,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Kru,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A Pygmy Central, Western African population with a population size of 6.8 millions",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510114,no preservatives claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0114,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510114,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,no preservatives claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_33675,p-block molecular entity,,A main group molecular entity that contains one or more atoms of a p-block element.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:33675,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,p-block molecular entity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A main group molecular entity that contains one or more atoms of a p-block element.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02010107,piece of animal meat,,A piece of meat that is derived from an animal.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=C0103,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02010107,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of animal meat,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A piece of meat that is derived from an animal.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03500023,enamel surface for seafood,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=N0023,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03500023,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,enamel surface for seafood,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100052,subject age at time of specimen collection bin (30 - 39),,An age group that stratifies the age of a case to be between 30 to 39 years old (inclusive).,FALSE,,,,,,,30 - 39,,,,,,,,,,,,,,,,,,,,,,,,ready for release,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100052,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,subject age at time of specimen collection bin (30 - 39),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An age group that stratifies the age of a case to be between 30 to 39 years old (inclusive).,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_33659,organic aromatic compound,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:33659,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,organic aromatic compound,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_9587,ticarcillin,,A penicillin compound having a 6β-[(2<i>R</i>)-2-carboxy-2-thiophen-3-ylacetyl]amino side-group.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:9587,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,ticarcillin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A penicillin compound having a 6β-[(2<i>R</i>)-2-carboxy-2-thiophen-3-ylacetyl]amino side-group.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100702,documentation data tag,documentation data type|documentation attribute bundle,A dataset attribute bundle which indicates the presence of documentation data.,FALSE,,,,,,,documentation,,,,,,,"Example Guidance: Use this tag to indicate additional data is available that provides information that is used to describe, explain or instruct regarding some attributes of an object, system or procedure.",,,,,,,,,,,"https://en.wikipedia.org/wiki/Documentation used as a partial source for the ""Example Guidance"".",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,documentation data type|documentation attribute bundle,,,,GENEPIO:0100702,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-05-18T19:08:34.869Z,,,,,,,,,,,,,,,,,,,documentation data tag,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A dataset attribute bundle which indicates the presence of documentation data.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000921,closed animal house,,An animal house which has a complete building envelope.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01000921,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,closed animal house,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An animal house which has a complete building envelope.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00008622,"populated place, Jamaica",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00008622,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Jamaica",http://purl.obolibrary.org/obo/GAZ_00003781,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_3907,coumermycin A1,,A hydroxycoumarin antibiotic that is obtained from <em>Streptomyces rishiriensis</em> and exhibits potent antibacterial and anticancer activity.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:3907,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,coumermycin A1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A hydroxycoumarin antibiotic that is obtained from <em>Streptomyces rishiriensis</em> and exhibits potent antibacterial and anticancer activity.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_36360,phosphorus oxoacids and derivatives,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:36360,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,phosphorus oxoacids and derivatives,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_9365,vesiculitis,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:9365,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,vesiculitis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_15734,primary alcohol,,"A primary alcohol is a compound in which a hydroxy group, ‒OH, is attached to a saturated carbon atom which has either three hydrogen atoms attached to it or only one other carbon atom and two hydrogen atoms attached to it.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:8406|CHEBI:57489|CHEBI:26262|CHEBI:14887|CHEBI:13676,,,,,,CHEBI:15734,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,primary alcohol,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A primary alcohol is a compound in which a hydroxy group, ‒OH, is attached to a saturated carbon atom which has either three hydrogen atoms attached to it or only one other carbon atom and two hydrogen atoms attached to it.",,,,,,,,
http://purl.obolibrary.org/obo/OBI_0003386,Illumina HiSeq 1500,,"A DNA sequencer which is manufactured by the Illumina corporation, with a single flow cell. Built upon sequencing by synthesis technology, the machine employs dual surface imaging and offers two high-output options and one rapid-run option.",FALSE,,,,,,,HiSeq 1500,,,,,,,,,,,,,,https://jp.support.illumina.com/content/dam/illumina-support/documents/documentation/system_documentation/hiseq1500/hiseq-1500-system-guide-15035788-03.pdf,,,,,Illumina HiSeq 1500,,,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0003386,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Illumina HiSeq 1500,,,,,,,,,,,,,,,,,,,,,,,,,,,,Suvarna Nadendla|Michelle Giglio|Jain Aluvathingal,,,https://github.com/obi-ontology/obi/issues/1546,"A DNA sequencer which is manufactured by the Illumina corporation, with a single flow cell. Built upon sequencing by synthesis technology, the machine employs dual surface imaging and offers two high-output options and one rapid-run option.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000029,beef sirloin tip steak,,A steak cut from the beef sirloin tip.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000029,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef sirloin tip steak,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A steak cut from the beef sirloin tip.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000200,beef shank cross-cut (raw),,A raw beef shank cross-cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000200,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef shank cross-cut (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef shank cross-cut.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470168,drying under increased pressure,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0168,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470168,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,drying under increased pressure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/PCO_0000031,organismal entity,,"A material entity that is one or more organisms, viruses or viroids.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PCO:0000031,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/pco.owl,,,,,,,,,organismal entity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A material entity that is one or more organisms, viruses or viroids.",,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000197,genomic coordinate system,,"a genomic coordinate system is a coordinate system to describe position of sequence on a genomic scaffold (assembly of chromosome, contig....)",FALSE,,,,,,,,,,,,,,,,,,,,,"ensembl, ucsc",,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000125,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000197,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,genomic coordinate system,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra|Alejandra Gonzalez-Beltran|Orlaith Burke,,,,"a genomic coordinate system is a coordinate system to describe position of sequence on a genomic scaffold (assembly of chromosome, contig....)",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001416,travel history,travel history,A data field which describes an individuals travel history in last six months.,FALSE,,,,,,,PCDS:travel_history,,,,,,,PCDS: Specify the countries (and more granular locations if known) travelled in the last six months; can include multiple travels. Separate multiple travel events with a semicolon. Provide as free text.,,,,,,,,,,,,,,"PCDS: Canada, Vancouver; USA, Seattle; Italy, Milan",,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,travel history,travel history slot,,,,GENEPIO:0001416,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,travel history,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes an individuals travel history in last six months.,,PCDS: Travel history in last six months.,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490396,polyethylene (high density) - nylon 11 container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0396,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490396,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,polyethylene (high density) - nylon 11 container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GO_0110165,cellular anatomical entity,,"A part of a cellular organism that is either an immaterial entity or a material entity with granularity above the level of a protein complex but below that of an anatomical system. Or, a substance produced by a cellular organism with granularity above the level of a protein complex.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GO:0110165,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/cob.owl,,,,,,,,,cellular anatomical entity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A part of a cellular organism that is either an immaterial entity or a material entity with granularity above the level of a protein complex but below that of an anatomical system. Or, a substance produced by a cellular organism with granularity above the level of a protein complex.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001532,food specimen datum,,"A particular attribute (feature, quality or process history) of a food sample.",FALSE,,,,,,,,,,,,,,The underlying facets will be supplied from the FoodOn food ontology.,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001532,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,food specimen datum,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"A particular attribute (feature, quality or process history) of a food sample.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001128,related specimen primary id,related specimen primary identifier|related specimen primary ID,An identifier field which describes the primary identifer of a related specimen previously submitted to the repository.,FALSE,,,,,,,PCDS:related_specimen_primary_id,,,,,,,PCDS: Store the primary ID of the related specimen previously submitted to the National Microbiology Laboratory so that the samples can be linked and tracked through the system.,,,,,,,,,,,,,,PCDS: SR20-12345,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,related specimen primary identifier|related specimen primary ID,related specimen primary identifier slot|related specimen primary identifier field|related specimen primary ID slot,,,,GENEPIO:0001128,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,related specimen primary id,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An identifier field which describes the primary identifer of a related specimen previously submitted to the repository.,,PCDS: The primary ID of a related specimen previously submitted to the repository.,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490374,polypropylene container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0374,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490374,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,polypropylene container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000206,"beef ribeye roll (lip on, raw)",,"A raw beef ribeye roll cut with attached ""lip"" muscle.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000206,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"beef ribeye roll (lip on, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A raw beef ribeye roll cut with attached ""lip"" muscle.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510183,enriched food claim,,A food is 'enriched' when nutrients are added to it to replace those that are lost in processing.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0183,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510183,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,enriched food claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A food is 'enriched' when nutrients are added to it to replace those that are lost in processing.,,,,,,,,
http://www.ebi.ac.uk/efo/EFO_0000724,timepoint,,Time point at which a sample or observation is made or taken from a biomaterial as measured from some reference point.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCIt:C68568|MO:738,,,,,,,,,,,,,,,,,,,,,,,,,,,,,efo:EFO_0000724,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,timepoint,,,,,,,,,,,,,,,,,,,,,,,,,,,,Tomasz Adamusiak|Jie Zheng|James Malone,,,,Time point at which a sample or observation is made or taken from a biomaterial as measured from some reference point.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100739,ribotype characterization data tag,ribotype data type,A molecular characterization data tag which indicates the presence of ribotype characterization data.,FALSE,,,,,,,ribotype,,,,,,,"Example Guidance: Use this tag to indicate additional data is available that provides characterization information from ribotyping, which involves the fingerprinting of genomic DNA restriction fragments that contain all or part of the genes coding for the 16S and 23S rRNA.",,,,,,,,,,,"http://purl.obolibrary.org/obo/GENEPIO_0000063 used as a partial source for the ""Example Guidance"".",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,ribotype data type,,,,GENEPIO:0100739,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-05-18T19:08:34.869Z,,,,,,,,,,,,,,,,,,,ribotype characterization data tag,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A molecular characterization data tag which indicates the presence of ribotype characterization data.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_38180,polycyclic heteroarene,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:38180,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,polycyclic heteroarene,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0060000,infective endocarditis,,An endocarditis that is characterized by inflammation of the endocardium caused by infectious agents.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0060000,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,infective endocarditis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An endocarditis that is characterized by inflammation of the endocardium caused by infectious agents.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0060525,brown shrimp allergy,,A crustacean allergy triggered by Farfantepenaeus aztecus.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0060525,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,brown shrimp allergy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A crustacean allergy triggered by Farfantepenaeus aztecus.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0060529,white shrimp allergy,,A crustacean allergy triggered by Litopenaeus vannamei.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0060529,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,white shrimp allergy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A crustacean allergy triggered by Litopenaeus vannamei.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0060521,cow milk allergy,,A milk allergy triggered by Bos taurus milk.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0060521,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,cow milk allergy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A milk allergy triggered by Bos taurus milk.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0060523,mollusc allergy,,A shellfish allergy triggered by Mollusca.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0060523,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,mollusc allergy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A shellfish allergy triggered by Mollusca.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0060524,crustacean allergy,,A shellfish allergy triggered by Crustacea.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0060524,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,crustacean allergy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A shellfish allergy triggered by Crustacea.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0060527,Indian prawn allergy,,A crustacean allergy triggered by Fenneropenaeus indicus.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0060527,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,Indian prawn allergy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A crustacean allergy triggered by Fenneropenaeus indicus.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0060526,crab allergy,,A crustacean allergy triggered by Scylla paramamosain.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0060526,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,crab allergy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A crustacean allergy triggered by Scylla paramamosain.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0060528,tiger prawn allergy,,A crustacean allergy triggered by Penaeus monodon.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0060528,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,tiger prawn allergy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A crustacean allergy triggered by Penaeus monodon.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0060522,goat milk allergy,,A milk allergy triggered by Capra hircus milk.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0060522,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,goat milk allergy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A milk allergy triggered by Capra hircus milk.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102194,cubic meter per hour,,A volumetric flow rate unit which is the measure of the volume of one cubic meter of matter crosses a given surface during the period of time equal to one hour.,FALSE,,,,,,,m^3/h,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102194,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2026-04-13T19:52:38.515Z,,,,,,,,,,,,,,,,,,,cubic meter per hour,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A volumetric flow rate unit which is the measure of the volume of one cubic meter of matter crosses a given surface during the period of time equal to one hour.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0006314,bodily fluid,fluid,Liquid components of living organisms. includes fluids that are excreted or secreted from the body as well as body water that normally is not.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:BodyFluid|Wikipedia:Body_fluid|MESH:D001826|GAID:266|FMA:280556|EMAPA:37441|BIRNLEX:20,,,,,,,,,,,,,,,,,,,,,,,,fluid,body fluid,,,,UBERON:0006314,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,bodily fluid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Liquid components of living organisms. includes fluids that are excreted or secreted from the body as well as body water that normally is not.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490112,paperboard tube with lid or ends,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0112,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490112,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,paperboard tube with lid or ends,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100432,sample collector contact name,sample_collector_contact_name|sample collector contact name,A data field which describes the name or job title of the contact responsible for follow-up regarding the sample.,FALSE,,,,,,,PCDS:sample_collector_contact_name,,,,,,,"PCDS: Provide the name of an individual or their job title. As personnel turnover may render the contact's name obsolete, it is more preferable to provide a job title for ensuring accuracy of information and institutional memory. If the information is unknown or cannot be provided, leave blank or provide a null value.",,,,,,,,,,,,,,PCDS: Enterics Lab Manager,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,sample_collector_contact_name|sample collector contact name,sample collector contact name slot,,,,GENEPIO:0100432,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,sample collector contact name,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the name or job title of the contact responsible for follow-up regarding the sample.,,PCDS: The name or job title of the contact responsible for follow-up regarding the sample.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001503,variant designation,variant designation,A data field which describes the variant classification of the lineage/clade.,FALSE,,,,,,,PCDS:variant_designation,,,,,,,"PCDS: If the lineage/clade is considered a Variant of Concern, select Variant of Concern from the pick list. If the lineage/clade contains mutations of concern (mutations that increase transmission, clincal severity, or other epidemiological fa ctors) but it not a global Variant of Concern, select Variant. If the lineage/clade does not contain mutations of concern, leave blank.",,,,,,,,,,,,,,PCDS: Variant of Concern,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,variant designation,variant designation slot,,,,GENEPIO:0001503,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,variant designation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the variant classification of the lineage/clade.,,"PCDS: The variant classification of the lineage/clade i.e. variant, variant of concern.",,,,,,
http://purl.obolibrary.org/obo/FOODON_02000156,beef top sirloin fillet (raw),,A raw beef top sirloin fillet.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000156,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef top sirloin fillet (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef top sirloin fillet.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020277,piece of chicken breast (with skin),,A piece of chicken breast that contains skin.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020277,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of chicken breast (with skin),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A piece of chicken breast that contains skin.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530209,conventional outdoor/open-air cultivation,,"Open-air plant cultivation using non-organic fertilizer, pest and weed control treatments.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0209,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530209,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,conventional outdoor/open-air cultivation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Open-air plant cultivation using non-organic fertilizer, pest and weed control treatments.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_5295,intestinal disease,,A gastrointestinal system disease that is located_in the intestine.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:5295,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,intestinal disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A gastrointestinal system disease that is located_in the intestine.,,,,,,,,
http://www.ebi.ac.uk/efo/EFO_0004529,lipid measurement,,A measure of circulating lipid,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCIt:C74949,,,,,,,,,,,,,,,,,,,,,,,,,,,,,efo:EFO_0004529,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,lipid measurement,,,,,,,,,,,,,,,,,,,,,,,,,,,,Helen Parkinson,,,,A measure of circulating lipid,,,,,,,,
http://purl.obolibrary.org/obo/APOLLO_SV_00000070,simulation,,A purely intentional entity that simulates an entity and its properties.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,APOLLO_SV:00000070,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/apollo_sv.owl,,,,,,,,,simulation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A purely intentional entity that simulates an entity and its properties.,,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000233,true positive rate,,sensitivity is a measurement datum qualifying a binary classification test and is computed by substracting the false negative rate to the integral numeral 1,FALSE,,,,,,,sensitivity|recall,,,,,,,,,,,,,,"adapted from:
http://en.wikipedia.org/wiki/Sensitivity_and_specificity
and
http://mathworld.wolfram.com/Sensitivity.html",,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000233,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,true positive rate,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra|Alejandra Gonzalez-Beltran|Orlaith Burke,,,,sensitivity is a measurement datum qualifying a binary classification test and is computed by substracting the false negative rate to the integral numeral 1,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0000569,ileocecal valve,valva ileocaecalis (valva ilealis),The ileocecal valve is a sphincter muscle situated at the junction of the small intestine (ileum) and the large intestine. Its critical function is to limit the reflux of colonic contents into the ileum.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:IleocecalValve|Wikipedia:Ileocecal_valve|UMLS:C0020880|SCTID:362153007|NCIT:C13066|MESH:D007080|FMA:15973,,,,,,,,,,,,,,,,,,,,,,,,,valva ileocaecalis (valva ilealis),,,,UBERON:0000569,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,ileocecal valve,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The ileocecal valve is a sphincter muscle situated at the junction of the small intestine (ileum) and the large intestine. Its critical function is to limit the reflux of colonic contents into the ileum.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001982,finishing strategy,,Sequencing intended to finish (close) gaps in existing coverage.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI SRA: FINISHING,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001982,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,finishing strategy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Sequencing intended to finish (close) gaps in existing coverage.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001413,destination of most recent travel country,destination of most recent travel (country),A geographical data field which describes the name of the country that was the destination of most recent travel.,FALSE,,,,,,,PCDS:destination_of_most_recent_travel_country,,,,,,,PCDS: Select the country name from the pick list provided in the template.,,,,,,,,,,,,,,PCDS: Canada,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,destination of most recent travel (country),destination of most recent travel (country) slot,,,,GENEPIO:0001413,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,destination of most recent travel country,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A geographical data field which describes the name of the country that was the destination of most recent travel.,,PCDS: The name of the country that was the destination of most recent travel.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001671,live birth,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001671,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,live birth,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00002403,food material,sustenance|nourishment|foodstuff|food,"Any substance that can be consumed by an organism to satisfy nutritional or other health needs, or to provide a social or organoleptic food experience",FALSE,,,,,,,,,,,,,,"This class is the top of FOODON's main food product hierarchy which is described in the https://www.foodon.org website, and can be searched in lookup services like https://www.ebi.ac.uk/ols/",,,,,,,https://en.wikipedia.org/wiki/Food,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,sustenance|nourishment|foodstuff|food,,,,FOODON:00002403,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl|http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,food material,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Any substance that can be consumed by an organism to satisfy nutritional or other health needs, or to provide a social or organoleptic food experience",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490340,"paperboard container, untreated",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0340,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490340,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"paperboard container, untreated",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/BTO_0001444,Vero cell,,"The Vero cell line was initiated from the kidney of a normal adult African green monkey on March 27, 1962, by Y. Yasumura and Y. Kawakita at the Chiba University in Chiba, Japan.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,BTO:0001444,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/bto.owl,,,,,,,,,Vero cell,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The Vero cell line was initiated from the kidney of a normal adult African green monkey on March 27, 1962, by Y. Yasumura and Y. Kawakita at the Chiba University in Chiba, Japan.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_15841,polypeptide,,A peptide containing ten or more amino acid residues.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:8314|CHEBI:14860,,,,,,CHEBI:15841,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,polypeptide,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A peptide containing ten or more amino acid residues.,,,,,,,,
http://purl.obolibrary.org/obo/PATO_0103000,quantitative,,"A quality of an entity that can be represented numerically, including anything that can be counted, measured, or given a numerical value.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PATO:0103000,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/pato.owl,,,,,,,,,quantitative,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A quality of an entity that can be represented numerically, including anything that can be counted, measured, or given a numerical value.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C87500,NCIT_C87500,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCIT:C87500,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00004983,"populated place, Uzbekistan",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00004983,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Uzbekistan",http://purl.obolibrary.org/obo/GAZ_00004979,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00004980,Province (Uzbekistan),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00004980,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Province (Uzbekistan),http://purl.obolibrary.org/obo/GAZ_00004979,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02010317,animal chop,,"A retail cut of meat from an animal that is perpendicular to the spine, and usually containing a rib or riblet part of a vertebra.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02010317,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,animal chop,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A retail cut of meat from an animal that is perpendicular to the spine, and usually containing a rib or riblet part of a vertebra.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_33259,elemental molecular entity,,A molecular entity all atoms of which have the same atomic number.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:33259,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,elemental molecular entity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A molecular entity all atoms of which have the same atomic number.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000001,beef round (raw),,A raw beef round cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000001,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef round (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef round cut.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100033,gastric lavage,,The administration and evacuation of small volumes of liquid through an orogastric tube to remove toxic substances within the stomach.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100033,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,gastric lavage,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The administration and evacuation of small volumes of liquid through an orogastric tube to remove toxic substances within the stomach.,,,,,,,,
http://snomed.info/sct/22642004,Bacterial bacteriophage typing,,An assay for detecting bacteria by subjecting them to strain-specific bacteriophages.,FALSE,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Phage_typing,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,22642004,,,,,,,,,,,,,,,,,,,,,,,,http://snomed.info/sct/900000000000207008,,,,,,,,,Bacterial bacteriophage typing,,,,,,,,,,,,,,,,,,,,,,http://phinvads.cdc.gov/vads/http:/phinvads.cdc.gov/vads/ViewCodeSystemConcept.action?oid=2.16.840.1.113883.6.96&code=22642004,,,,,,Damion Dooley,,,,An assay for detecting bacteria by subjecting them to strain-specific bacteriophages.,,,,,,,,
http://purl.obolibrary.org/obo/IAO_0001000,data collection,,A data entity that consists of multiple data entities.,FALSE,,,,,,,data set,,,,,,,,,,,,,,,,,,,data collection,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,IAO:0001000,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/iao.owl,,,,,,,,,data collection,,,,,,,,,,,,,,,,,,,,,,,,,,,,Sebastian Duesing,,,,A data entity that consists of multiple data entities.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_63367,monosaccharide derivative,,A carbohydrate derivative that is formally obtained from a monosaccharide.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:63367,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,monosaccharide derivative,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A carbohydrate derivative that is formally obtained from a monosaccharide.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038849,craniocervical lymph node,lymph node of head and neck|head and neck lymph node,Lymph node located in either head and neck region.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:321555,,,,,,,,,,,,,,,,,,,,,,,,,lymph node of head and neck|head and neck lymph node,,,,UBERON:0038849,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,craniocervical lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Lymph node located in either head and neck region.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_36080,protein,,A biological macromolecule minimally consisting of one polypeptide chain synthesized at the ribosome.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:14911|CHEBI:13677,,,,,,CHEBI:36080,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,protein,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A biological macromolecule minimally consisting of one polypeptide chain synthesized at the ribosome.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002073,National Institute of Allergy and Infectious Disease standard,,NIAID provides The GSCID/BRC Project and Sample Application Standard. It is designed to capture standardized human pathogen and vector sequencing metadata to support epidemiologic and genotype-phenotype association studies for human infectious diseases.,FALSE,,,,,,,,,,,,,,,,,,,,,https://www.niaid.nih.gov/research/human-pathogen-and-vector-sequencing-metadata-standards,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002073,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,National Institute of Allergy and Infectious Disease standard,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,NIAID provides The GSCID/BRC Project and Sample Application Standard. It is designed to capture standardized human pathogen and vector sequencing metadata to support epidemiologic and genotype-phenotype association studies for human infectious diseases.,,,,NIAID standard,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100813,total phosphorus tp measurement method,total phosphorus (TP) measurement method,An environmental data field which describes the method used to measure total phosphorus (TP).,FALSE,,,,,,,PCDS:total_phosphorus_tp_measurement_method,,,,,,,PCDS: Provide the name of the procedure or technology used to measure TP.,,,,,,,,,,,,,,PCDS: Merck phosphate spectrophotometric test kit,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,total phosphorus (TP) measurement method,total phosphorus (TP) measurement method slot,,,,GENEPIO:0100813,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,total phosphorus tp measurement method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the method used to measure total phosphorus (TP).,,PCDS: The method used to measure total phosphorus (TP).,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000422,bathroom,bathing room,"A bathroom is a room which contains a washbasin or other fixture, such as a shower or bath, used for bathing by humans.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,bathing room,,,,ENVO:01000422,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,bathroom,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A bathroom is a room which contains a washbasin or other fixture, such as a shower or bath, used for bathing by humans.",,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00005004,"populated place, Kazakhstan",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00005004,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Kazakhstan",http://purl.obolibrary.org/obo/GAZ_00004999,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00005000,Province (Kazakhstan),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00005000,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Province (Kazakhstan),http://purl.obolibrary.org/obo/GAZ_00004999,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_96,staphyloenterotoxemia,,"A primary bacterial infectious disease that results_in infection located_in intestine caused by eating food contaminated with enterotoxins produced by bacteria, has_material_basis_in Staphylococcus aureus. The infection has_symptom diarrhea, has_symptom vomiting, has_symptom nausea, has_symptom cramps, and has_symptom weakness.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:96,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,staphyloenterotoxemia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A primary bacterial infectious disease that results_in infection located_in intestine caused by eating food contaminated with enterotoxins produced by bacteria, has_material_basis_in Staphylococcus aureus. The infection has_symptom diarrhea, has_symptom vomiting, has_symptom nausea, has_symptom cramps, and has_symptom weakness.",,,,,,,,
http://purl.obolibrary.org/obo/IDO_0000502,infectious disease epidemic,,A process of infectious disease realizations and for which there is a statistically significant increase in the infectious disease incidence of a population.,FALSE,,,,,,,infectious disease outbreak,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,IDO:0000502,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ido.owl,,,,,,,,,infectious disease epidemic,,,,,,,,,,,,,,,,,,,,,,,,,,,,Lindsay Cowell|Alexander Diehl|Albert Goldfain,,,,A process of infectious disease realizations and for which there is a statistically significant increase in the infectious disease incidence of a population.,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000468,Ngumba,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000468,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Ngumba|Ngumba,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000462,Eshira,,A Bantu Central population with a population size of 74000,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000462,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Eshira|Eshira,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Bantu Central population with a population size of 74000,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000463,Hema,,A Bantu Central population with a population size of 215000,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000463,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Hema|Hema,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Bantu Central population with a population size of 215000,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000467,Nande,,A Bantu Central population with a population size of 2.355 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000467,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Nande|Nande,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Bantu Central population with a population size of 2.355 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000465,Makaa,,A Bantu Central population with a population size of 89500,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000465,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Makaa|Makaa,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Bantu Central population with a population size of 89500,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000461,Duala,,A Bantu Central population with a population size of 260000,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000461,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Duala|Duala,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Bantu Central population with a population size of 260000,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000466,Myene,,A Bantu Central population with a population size of 117030,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000466,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Myene|Myene,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Bantu Central population with a population size of 117030,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000469,Obamba,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000469,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Obamba|Obamba,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000464,Kota,,A Bantu Central population with a population size of 81500,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000464,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Kota|Kota,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Bantu Central population with a population size of 81500,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03308405,"fish fillet (breaded, precooked)",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://bioregistry.io/reference/siren:F8405,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03308405,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"fish fillet (breaded, precooked)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_2170,vaginitis,,A vaginal disease that is characterized by inflammation of the vagina.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:2170,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,vaginitis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A vaginal disease that is characterized by inflammation of the vagina.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000155,organic material,biomass,Environmental material derived from living organisms and composed primarily of one or more biomacromolecules.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,EcoLexicon:organic_material,,,,,,,,,,,,,,,,,,,,,,,,,biomass,,,,ENVO:01000155,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,organic material,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Environmental material derived from living organisms and composed primarily of one or more biomacromolecules.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000017,"beef top round steak (boneless, raw)",,A raw and boneless beef top round steak.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000017,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"beef top round steak (boneless, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw and boneless beef top round steak.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100845,percent read contamination,percent read contamination,A data field which describes the percentage of the total number of reads identified as contamination (not belonging to the target organism) in a sequence dataset.,FALSE,,,,,,,PCDS:percent_read_contamination,,,,,,,PCDS: Provide the percent contamination value (no need to include units).,,,,,,,,,,,,,,PCDS: 2,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,percent read contamination,percent read contamination slot,,,,GENEPIO:0100845,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,percent read contamination,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the percentage of the total number of reads identified as contamination (not belonging to the target organism) in a sequence dataset.,,PCDS: The percent of the total number of reads identified as contamination (not belonging to the target organism) in a sequence dataset.,,,,,,
http://purl.obolibrary.org/obo/FOODON_03305143,fish fillet (frozen),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://bioregistry.io/reference/siren:F5143,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03305143,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,fish fillet (frozen),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100462,isolated by laboratory name,isolated_by_laboratory_name|isolated by laboratory name,A data field which describes the specific laboratory affiliation of the individual who performed the isolation procedure.,FALSE,,,,,,,PCDS:isolated_by_laboratory_name,,,,,,,"PCDS: Provide the name of the specific laboratory that that isolated the original isolate (avoid abbreviations). If the information is unknown or cannot be provided, leave blank or provide a null value.",,,,,,,,,,,,,,PCDS: Topp Lab,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,isolated_by_laboratory_name|isolated by laboratory name,isolated by laboratory name slot,,,,GENEPIO:0100462,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,isolated by laboratory name,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the specific laboratory affiliation of the individual who performed the isolation procedure.,,PCDS: The specific laboratory affiliation of the individual who performed the isolation procedure.,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510229,food allergen labelling about corn and products thereof,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0229,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510229,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food allergen labelling about corn and products thereof,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100092,ventilation induced lung injury,VILI,A lung injury that results from mechanical stress and strain that occur during tidal ventilation in the susceptible lung.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,VILI,,,,GENEPIO:0100092,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,ventilation induced lung injury,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A lung injury that results from mechanical stress and strain that occur during tidal ventilation in the susceptible lung.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001729,obsolete: swab - tissue,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000229,,,,,,,,,,,,,,,,,,,GENEPIO:0001729,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: swab - tissue,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03500031,cellophane,,"Cellophane is a thin, transparent sheet made of regenerated cellulose.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=N0031,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03500031,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,cellophane,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Cellophane is a thin, transparent sheet made of regenerated cellulose.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470134,shelf-drying under normal pressure,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0134,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470134,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,shelf-drying under normal pressure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490108,"glass container, plastic lid, paper lining",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0108,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490108,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"glass container, plastic lid, paper lining",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_64509,oxapenam,,"A fused-ring β-lactam system where the β-lactam ring is fused to a 1,3-oxazolidine ring.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:64509,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,oxapenam,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A fused-ring β-lactam system where the β-lactam ring is fused to a 1,3-oxazolidine ring.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_164200,triclosan,,"An aromatic ether that is phenol which is substituted at C-5 by a chloro group and at C-2 by a 2,4-dichlorophenoxy group. It is widely used as a preservative and antimicrobial agent in personal care products such as soaps, skin creams, toothpaste and deodorants as well as in household items such as plastic chopping boards, sports equipment and shoes.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:47700|CHEBI:29697,,,,,,CHEBI:164200,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,triclosan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An aromatic ether that is phenol which is substituted at C-5 by a chloro group and at C-2 by a 2,4-dichlorophenoxy group. It is widely used as a preservative and antimicrobial agent in personal care products such as soaps, skin creams, toothpaste and deodorants as well as in household items such as plastic chopping boards, sports equipment and shoes.",,,,,,,,
http://www.ebi.ac.uk/efo/EFO_0009642,follow-up,follow up,The process by which information about the health status of an individual is obtained after a study has officially closed; an activity that continues something that has already begun or that repeats something that has already been done. [def-source: NCI],FALSE,,,,,,,,,,,,,,EFO:0009642 'follow-up' refers to the medical procedure process of running follow-ups; EFO:0030038 'follow up status' refers to an observed quality.,,,,,,,,,,,,,,,,,,NCIt:C16033|ICD10:Z48|ICD10:Z42|ICD10:Z09|ICD10:Z08,,,,,,,,,,,,,,,,,,,,,,,,,follow up,,,,efo:EFO_0009642,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,follow-up,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The process by which information about the health status of an individual is obtained after a study has officially closed; an activity that continues something that has already begun or that repeats something that has already been done. [def-source: NCI],,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001801,metagenomic species identification,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001801,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,metagenomic species identification,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_9699,ophthalmia neonatorum,,A bacterial conjuctivitis that is characterized by pain and tenderness in the eyeball and conjuctival discharge.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:9699,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,ophthalmia neonatorum,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A bacterial conjuctivitis that is characterized by pain and tenderness in the eyeball and conjuctival discharge.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001185,sampling location name state province region,geographical location state or province or territory name or region|geo_loc name (state/province/territory/region)|geo_loc name (state/province/territory),"A data field which describes the state, province, or territory of origin of the sample.",FALSE,,,,,,,PCDS:geo_loc_name_state_province_territory_region,,,,,,,PCDS: Provide the province/territory name from the controlled vocabulary provided.,,,,,,,,,,,,,,PCDS: Saskatchewan,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,geographical location state or province or territory name or region|geo_loc name (state/province/territory/region)|geo_loc name (state/province/territory),sample collection name state province region,,,,GENEPIO:0001185,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,sampling location name state province region,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A data field which describes the state, province, or territory of origin of the sample.",,PCDS: The state/province/territory of origin of the sample.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001126,lifespan history item,,A livespan history item is a date-associated event pertaining to the life of a subject.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001126,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,lifespan history item,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A livespan history item is a date-associated event pertaining to the life of a subject.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00003708,"populated place, Australia",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00003708,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Australia",http://purl.obolibrary.org/obo/GAZ_00000463,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00003706,Territory of Guam,,"lat_lon: 13deg27minN, 144deg47minE.",FALSE,,,,,,,,,,,,,,"lat_lon: 13deg27minN, 144deg47minE.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00003706,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Territory of Guam,http://purl.obolibrary.org/obo/GAZ_00054790|http://purl.obolibrary.org/obo/GAZ_00005862,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_23367,molecular entity,,"Any constitutionally or isotopically distinct atom, molecule, ion, ion pair, radical, radical ion, complex, conformer etc., identifiable as a separately distinguishable entity.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:23367,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ido.owl|http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,molecular entity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Any constitutionally or isotopically distinct atom, molecule, ion, ion pair, radical, radical ion, complex, conformer etc., identifiable as a separately distinguishable entity.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020500,"turkey breast (skinless, boneless, raw)",,"A raw, skinless and boneless turkey breast.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020500,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"turkey breast (skinless, boneless, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A raw, skinless and boneless turkey breast.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100853,artic-v5.1.0_400 strategy,,An amplicon strategy which was developed by the ARTIC consortium for SARS-CoV-2with the attributes of version 5.1.0 which produces amplicons approximately 400bp in length.,FALSE,,,,,,,artic-v5.1.0_400|artic v5.1.0_400,,,,,,,,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100853,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2026-04-13T19:52:38.515Z,,,,,,,,,,,,,,,,,,,artic-v5.1.0_400 strategy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An amplicon strategy which was developed by the ARTIC consortium for SARS-CoV-2with the attributes of version 5.1.0 which produces amplicons approximately 400bp in length.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490402,polyethylene (low density) - polyethylene (high density) container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0402,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490402,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,polyethylene (low density) - polyethylene (high density) container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020432,"piece of turkey (with skin, raw)",,A piece of turkey that contains the skin and is raw.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020432,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"piece of turkey (with skin, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A piece of turkey that contains the skin and is raw.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0003672,dentition,teeth set|teeth|set of teeth|dentes,"A collection of teeth arranged in some pattern in the mouth or other part of the body. The arrangement may be a simple row, a collection of rows, or a more elaborate structure, such as a toooth whorl.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0011443|SCTID:245543004|NCIT:C13072|MESH:D003817|GAID:1249|FMA:75150|AAO:0000126,,,,,,,,,,,,,,,,,,,,,,,,,teeth set|teeth|set of teeth|dentes,,,,UBERON:0003672,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,dentition,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A collection of teeth arranged in some pattern in the mouth or other part of the body. The arrangement may be a simple row, a collection of rows, or a more elaborate structure, such as a toooth whorl.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100710,nitrate measurement characterization tag,nitrate measurement characterization data tag,A chemical characterization data tag which indicates the presence of data that descibes a measurement of nitrate.,FALSE,,,,,,,nitrate measurement,,,,,,,Example Guidance: Use this tag to indicate additional data is available that provides characterization information from the determination of the amount of nitrate present in a sample.,,,,,,,,,,,"http://purl.obolibrary.org/obo/NCIT:C161352 used as a partial source for the ""Example Guidance"".",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,nitrate measurement characterization data tag,,,,GENEPIO:0100710,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-5275-8866,2023-05-18T19:08:34.869Z,,,,,,,,,,,,,,,,,,,nitrate measurement characterization tag,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A chemical characterization data tag which indicates the presence of data that descibes a measurement of nitrate.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470100,preservation by adding chemicals,,"Preservation by adding chemical preservatives (e.g., sorbic acid, sodium benzoate, BHT, calcium proprionate) to suppress or inhibit undesirable microorganisms or enzyme activity.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0100,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470100,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,preservation by adding chemicals,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Preservation by adding chemical preservatives (e.g., sorbic acid, sodium benzoate, BHT, calcium proprionate) to suppress or inhibit undesirable microorganisms or enzyme activity.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C28147,Embryo,embryo|Human Embryo|Embryologic|Embryo|EMBRYO,"An organism in its initial stage of development following fertilization. The human embryonic period lasts approximately eight weeks, during which time organogenesis takes place.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,embryo|Human Embryo|Embryologic|Embryo|EMBRYO,,,,NCIT:C28147,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Embryo,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An organism in its initial stage of development following fertilization. The human embryonic period lasts approximately eight weeks, during which time organogenesis takes place.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510248,high unsaturated  fat,,"A claim that a food is high in unsaturated fat, and any claim likely to have the same meaning for the consumer may only be made where at least 70 % of the fatty acids present in the product derive from unsaturated fat under the condition that unsaturated fat provides more than 20 % of energy of the product [COMMISSION REGULATION (EU) No 116/2010 of 9 February 2010 amending Regulation (EC) No 1924/2006 of the European Parliament and of the Council with regard to the list of nutrition claims]..",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0248,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510248,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,high unsaturated  fat,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A claim that a food is high in unsaturated fat, and any claim likely to have the same meaning for the consumer may only be made where at least 70 % of the fatty acids present in the product derive from unsaturated fat under the condition that unsaturated fat provides more than 20 % of energy of the product [COMMISSION REGULATION (EU) No 116/2010 of 9 February 2010 amending Regulation (EC) No 1924/2006 of the European Parliament and of the Council with regard to the list of nutrition claims]..",,,,,,,,
http://purl.obolibrary.org/obo/HP_0030680,Abnormal cardiovascular system morphology,Cardiovascular malformations|Abnormality of cardiovascular system morphology,Any structural anomaly of the heart and blood vessels.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4049796,,,,,,,,,,,,,,,,,,,,,,,HP:0002565|HP:0002564|HP:0001632,,Cardiovascular malformations|Abnormality of cardiovascular system morphology,,,,HP:0030680,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal cardiovascular system morphology,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any structural anomaly of the heart and blood vessels.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100513,AMR testing by contact name,antimicrobial resistance testing by contact name|AMR_testing_by_contact_name|AMR testing by contact name,A data field which describes the name of the individual or the individual's role in the organization that performed the antimicrobial resistance (AMR) testing.,FALSE,,,,,,,PCDS:amr_testing_by_contact_name,,,,,,,"PCDS: Provide the name of an individual or their job title. As personnel turnover may render the contact's name obsolete, it is more preferable to provide a job title for ensuring accuracy of information and institutional memory. If the information is unknown or cannot be provided, leave blank or provide a null value.",,,,,,,,,,,,,,PCDS: Enterics Lab Manager,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,antimicrobial resistance testing by contact name|AMR_testing_by_contact_name|AMR testing by contact name,antimicrobial resistance testing by contact name slot|antimicrobial resistance testing by contact name field|AMR testing by contact name slot,,,,GENEPIO:0100513,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-12-22T00:55:53.808Z,,,,,,,,,,,,,,,,,,,AMR testing by contact name,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the name of the individual or the individual's role in the organization that performed the antimicrobial resistance (AMR) testing.,,PCDS: The name of the individual or the individual's role in the organization that performed the antimicrobial resistance testing.,,,,,,
http://purl.obolibrary.org/obo/UBERON_0001359,cerebrospinal fluid,cerebral spinal fluid|CSF,"A clear, colorless, bodily fluid, that occupies the subarachnoid space and the ventricular system around and inside the brain and spinal cord.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ZFA:0001626|Wikipedia:Cerebrospinal_fluid|VHOG:0001278|UMLS:C0007806|TAO:0002184|NCIT:C12692|MESH:D002555|MAT:0000499|MA:0002503|GAID:1181|FMA:20935|EV:0100311|ENVO:02000029|EHDAA2:0004441|EFO:0000329|CALOHA:TS-0130|BTO:0000237|BIRNLEX:1798,,,,,,,,,,,,,,,,,,,,,,,,,cerebral spinal fluid|CSF,,,,UBERON:0001359,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,cerebrospinal fluid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A clear, colorless, bodily fluid, that occupies the subarachnoid space and the ventricular system around and inside the brain and spinal cord.",,,,cerebrospinal fluid (CSF),,,,
http://purl.obolibrary.org/obo/DOID_1260,parametritis,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:1260,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,parametritis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_36835,3alpha-hydroxy steroid,,A 3-hydroxy steroid in which the 3-hydroxy substituent is in the α-position.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:71194,,,,,,CHEBI:36835,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,3alpha-hydroxy steroid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A 3-hydroxy steroid in which the 3-hydroxy substituent is in the α-position.,,,,,,,,
http://purl.obolibrary.org/obo/IAO_0000104,plan specification,,"A directive information entity with action specifications and objective specifications as parts, and that may be concretized as a realizable entity that, if realized, is realized in a process in which the bearer tries to achieve the objectives by taking the actions specified.",FALSE,,,,,,,,,,,,,,"2/3/2009 Comment from OBI review.

Action specification not well enough specified.
Conditional specification not well enough specified.
Question whether all plan specifications have objective specifications.

Request that IAO either clarify these or change definitions not to use them",,,,,,,OBI_0000344|OBI Plan and Planned Process branch,,,,"Alternative previous definition: a plan is a set of instructions that specify how an objective should be achieved|2022-01-16 Updated definition to that proposed by Clint Dowloand, IAO Issue 231.|2014-03-31: A plan specification can have other parts, such as conditional specifications.|2009-03-16: provenance: a term a plan was proposed for OBI (OBI_0000344) , edited by the PlanAndPlannedProcess branch. Original definition was "" a plan is a specification of a process that is realized by an actor to achieve the objective specified as part of the plan"". It has been subsequently moved to IAO where the objective for which the original term was defined was satisfied with the definitionof this, different, term.",plan specification,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,IAO:0000104,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/iao.owl|http://purl.obolibrary.org/obo/cob.owl,,,,,,,,,plan specification,,,,,,,,,,,,,,,,,,,,,,,,,,,,Clint Dowland|Alan Ruttenberg,,,,"A directive information entity with action specifications and objective specifications as parts, and that may be concretized as a realizable entity that, if realized, is realized in a process in which the bearer tries to achieve the objectives by taking the actions specified.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530043,shoulder (meat cut),,Meat cut from the area where the clod meets the edge of the pectoral muscle in an animal.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0043,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530043,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,shoulder (meat cut),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Meat cut from the area where the clod meets the edge of the pectoral muscle in an animal.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510075,rich in fiber claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0075,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510075,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,rich in fiber claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_34996,teicoplanin A2-3,,A teicoplanin A<small><sub>2</sub></small> that has decanoyl as the variable <em>N</em>-acyl group.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:34996,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,teicoplanin A2-3,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A teicoplanin A<small><sub>2</sub></small> that has decanoyl as the variable <em>N</em>-acyl group.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_5530,gramicidin S,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:5530,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,gramicidin S,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C25742,Pregnancy,pregnancy|Pregnancy|PREGNANCY|Gestation,"The state or condition of having a developing embryo or fetus in the body (uterus), after union of an ovum and spermatozoon, during the period from conception to birth.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,pregnancy|Pregnancy|PREGNANCY|Gestation,,,,NCIT:C25742,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Pregnancy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The state or condition of having a developing embryo or fetus in the body (uterus), after union of an ovum and spermatozoon, during the period from conception to birth.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_9588,encephalitis,,A brain disease that is characterized as an acute inflammation of the brain with flu-like symptoms.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:9588,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,encephalitis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A brain disease that is characterized as an acute inflammation of the brain with flu-like symptoms.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_33958,halide salt,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:33958,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,halide salt,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03500012,noncarbonated beverage can enamel surface,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=N0012,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03500012,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,noncarbonated beverage can enamel surface,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HP_0000217,Xerostomia,Decreased salivary flow,Dryness of the mouth due to salivary gland dysfunction.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0043352|SNOMEDCT_US:87715008|SNOMEDCT_US:56893005|SNOMEDCT_US:300268000,,,,,,,,,,,,,,,,,,,,,,,HP:0100756|HP:0002709,Decreased salivary flow,Reduced salivation|Dry mouth syndrome|Dry mouth,,,,HP:0000217,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,http://purl.oboInOwllibrary.org/oboInOwl/hp#hposlim_core,,,,,,,,Xerostomia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Dryness of the mouth due to salivary gland dysfunction.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100068,silent hypoxemia,,Abnormally low blood oxygen level without the presence of dyspnea/dyspnoea.,FALSE,,,,,,,Silent hypoxemia,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7397783/,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100068,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,silent hypoxemia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Abnormally low blood oxygen level without the presence of dyspnea/dyspnoea.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001034,obsolete: community event,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001034,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: community event,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/PCO_0000034,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001570,contig N99,,The N99 length definition is identical to the N50 definition except that the threshold for determining the contigs is 1% of the nucleotides.  This contig basepair length can be compared to a minimum threshold to determine if gene annotation (where contigs greater than say 2000bp are necessary) would generally succeed.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001570,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,,,,,,,contig N99,,,,,Assembly QC,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,The N99 length definition is identical to the N50 definition except that the threshold for determining the contigs is 1% of the nucleotides.  This contig basepair length can be compared to a minimum threshold to determine if gene annotation (where contigs greater than say 2000bp are necessary) would generally succeed.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001995,library name,,The submitter's name for this library.,FALSE,,,,,,,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/books/NBK54984/table/SRA_Glossary_BK.T._library_descriptor_te/?report=objectonly,,,,,,,,,,,NCBI SRA: LIBRARY_NAME,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001995,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,library name,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,The submitter's name for this library.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100945,cone-shaped sampling device,,"A grab sampler that has a controlled valve that opens to take a sample from a specific depth, then closes to bring the sample out.",FALSE,,,,,,,cone-shaped sampler,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100945,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-11-20T16:24:25Z,,,,,,,,,,,,,,,,,,,cone-shaped sampling device,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A grab sampler that has a controlled valve that opens to take a sample from a specific depth, then closes to bring the sample out.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490213,box,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0213,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490213,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,box,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001509,diagnostic pcr ct value,diagnostic pcr ct value 5|diagnostic pcr ct value 4|diagnostic pcr ct value 3|diagnostic pcr ct value 2|diagnostic pcr ct value 1|GENEPIO:0100579|GENEPIO:0100577|GENEPIO:0001515|GENEPIO:0001512,A data field which describes the Ct value result from a diagnostic SARS-CoV-2 RT-PCR test.,FALSE,,,,,,,PCDS:diagnostic_pcr_ct_value_*,,,,,,,PCDS: Provide the CT value of the sample from the diagnostic RT-PCR test.,,,,,,,,,,,,,,PCDS: 21,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,diagnostic pcr ct value 5|diagnostic pcr ct value 4|diagnostic pcr ct value 3|diagnostic pcr ct value 2|diagnostic pcr ct value 1|GENEPIO:0100579|GENEPIO:0100577|GENEPIO:0001515|GENEPIO:0001512,,,,GENEPIO:0001509,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,diagnostic pcr ct value,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the Ct value result from a diagnostic SARS-CoV-2 RT-PCR test.,,PCDS: The Ct value result from a diagnostic SARS-CoV-2 RT-PCR test.,,,,,,
http://purl.obolibrary.org/obo/NCIT_C27954,Adolescent,Adolescents|Adolescent|ADOLESCENT,An age group comprised of juveniles between the onset of puberty and maturity; in the state of development between puberty and maturity.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Adolescents|Adolescent|ADOLESCENT,,,,NCIT:C27954,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Adolescent,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An age group comprised of juveniles between the onset of puberty and maturity; in the state of development between puberty and maturity.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00002820,Caribbean Sea,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00002820,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Caribbean Sea,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00002826,"populated place, Chile",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00002826,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Chile",http://purl.obolibrary.org/obo/GAZ_00002825,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100529,AMR vendor name,antimicrobial resistance vendor name|AMR_vendor_name|AMR vendor name,An antimicrobial resistance (AMR) field which describes the name of the vendor of the testing platform used.,FALSE,,,,,,,PCDS:amr_vendor_name|PCDS:*_vendor_name,,,,,,,PCDS: Provide the full name of the company (avoid abbreviations).,,,,,,,,,,,,,,PCDS: Sensititre [ARO:3004402],,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,antimicrobial resistance vendor name|AMR_vendor_name|AMR vendor name,antimicrobial resistance vendor name slot|antimicrobial resistance vendor name field|AMR vendor name slot,,,,GENEPIO:0100529,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-12-22T00:55:53.808Z,,,,,,,,,,,,,,,,,,,AMR vendor name,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An antimicrobial resistance (AMR) field which describes the name of the vendor of the testing platform used.,,PCDS: The name of the vendor of the testing platform used.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100746,matter compostion characterization tag,matter compostion data type,A physical characterization data tag which indicates the presence of matter compostion characterization data.,FALSE,,,,,,,matter compostion,,,,,,,Example Guidance: Use this tag to indicate additional data is available that provides the composition of the mass of something.,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,matter compostion data type,,,,GENEPIO:0100746,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-05-18T19:08:34.869Z,,,,,,,,,,,,,,,,,,,matter compostion characterization tag,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A physical characterization data tag which indicates the presence of matter compostion characterization data.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_36587,organic oxo compound,,"Organic compounds containing an oxygen atom, =O, doubly bonded to carbon or another element.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:36587,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,organic oxo compound,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Organic compounds containing an oxygen atom, =O, doubly bonded to carbon or another element.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001676,contact specification - parent/guardian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001676,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0001541,,,,,,contact specification - parent/guardian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_26878,tertiary alcohol,,"A tertiary alcohol is a compound in which a hydroxy group, ‒OH, is attached to a saturated carbon atom which has three other carbon atoms attached to it.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:26878,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,tertiary alcohol,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A tertiary alcohol is a compound in which a hydroxy group, ‒OH, is attached to a saturated carbon atom which has three other carbon atoms attached to it.",,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000585,desk,,"A desk is a table which is intended for information-manipulation tasks, including writing and use of interactive electronics.",FALSE,,,,,,,,,,,,,,"The intentional nature of this definition is problematic, but the restricted range of activities visited upon a desk is of interest.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01000585,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,desk,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A desk is a table which is intended for information-manipulation tasks, including writing and use of interactive electronics.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000101,GENEPIO_0000101,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000101,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0060645,chronic recurrent multifocal osteomyelitis,,"An osteomyelitis characterized by multiple foci of painful swelling of bones, mainly in the metaphyses of the long bones, in addition to the pelvis, the shoulder girdle and the spine.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0060645,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,chronic recurrent multifocal osteomyelitis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An osteomyelitis characterized by multiple foci of painful swelling of bones, mainly in the metaphyses of the long bones, in addition to the pelvis, the shoulder girdle and the spine.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0001557,upper respiratory tract,,"The segment of the respiratory tract that starts proximally with the nose and ends distally with the cricoid cartilage, before continuing to the trachea.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Upper_respiratory_tract|VHOG:0000406|SCTID:361381009|MA:0000442|FMA:45661|EMAPA:17669|EHDAA2:0002136,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0001557,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,upper respiratory tract,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The segment of the respiratory tract that starts proximally with the nose and ends distally with the cricoid cartilage, before continuing to the trachea.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0001558,lower respiratory tract,lower respiratory system,"The segment of the respiratory tract that starts proximally with the trachea and includes all distal structures including the lungs[WP,modified].",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Lower_respiratory_tract|VHOG:0000382|SCTID:281488008|MA:0000435|FMA:45662|EMAPA:16738|EHDAA2:0001036,,,,,,,,,,,,,,,,,,,,,,,,,lower respiratory system,,,,UBERON:0001558,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,lower respiratory tract,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The segment of the respiratory tract that starts proximally with the trachea and includes all distal structures including the lungs[WP,modified].",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0001555,digestive tract,alimentary tract|alimentary canal,A tube extending from the mouth to the anus.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:AlimentaryTract|ZFA:0000112|WBbt:0005743|VHOG:0000309|UMLS:C0017189|TGMA:0001819|TAO:0000112|NCIT:C34082|MESH:D041981|MA:0000917|FMA:45615|FBbt:00003125|EMAPA:16247|EHDAA:518|EHDAA2:0000726|BTO:0000545|BTO:0000511|BILA:0000083|AAO:0010023,,,,,,,,,,,,,,,,,,,,,,,,gut,enteric tract|digestive tube,alimentary tract|alimentary canal,,,UBERON:0001555,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,digestive tract,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A tube extending from the mouth to the anus.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_1498,cholera,,"A primary bacterial infectious disease that is described as an acute, diarrheal illness caused by infection of the intestine with the bacterium Vibrio cholerae, which is characterized by profuse watery diarrhea, vomiting, leg cramps, circulatory collapse and shock.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:1498,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,cholera,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A primary bacterial infectious disease that is described as an acute, diarrheal illness caused by infection of the intestine with the bacterium Vibrio cholerae, which is characterized by profuse watery diarrhea, vomiting, leg cramps, circulatory collapse and shock.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C49498,Recovered from Adverse Event,Recovered from Adverse Event|Recovered|RECOVERED/RESOLVED|Patient recovered,One of the possible results of an adverse event outcome that indicates that the event has improved or recuperated.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Recovered from Adverse Event|Recovered|RECOVERED/RESOLVED|Patient recovered,,,,NCIT:C49498,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Recovered from Adverse Event,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,One of the possible results of an adverse event outcome that indicates that the event has improved or recuperated.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490151,metal container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0151,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490151,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,metal container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_35285,iminium betaine,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:35285,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,iminium betaine,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0000011,obsolete planned process,,A process that realizes a plan which is the concretization of a plan specification.,TRUE,,,,,,,,,,,,,,,,,,,,"This class merges the previously separated objective driven process and planned process, as they the separation proved hard to maintain. (1/22/09, branch call)|6/11/9: Edited at workshop. Used to include: is initiated by an agent",branch derived,,true,,"We are only considering successfully completed planned processes. A plan may be modified, and details added during execution. For a given planned process, the associated realized plan specification is the one encompassing all changes made during execution. This means that all processes in which an agent acts towards achieving some objectives is a planned process.|'Plan' includes a future direction sense. That can be problematic if plans are changed during their execution. There are however implicit contingencies for protocols that an agent has in his mind that can be considered part of the plan, even if the agent didn't have them in mind before. Therefore, a planned process can diverge from what the agent would have said the plan was before executing it, by adjusting to problems encountered during execution (e.g. choosing another reagent with equivalent properties, if the originally planned one has run out.)",obsolete planned process,,Injecting mice with a vaccine in order to test its efficacy,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000228,,,,,,,,,,,,,,,,,,,OBI:0000011,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete planned process|obsolete planned process,,,,,,,,,,,,,,,,,,,,,,,,,,,,Bjoern Peters,http://purl.obolibrary.org/obo/COB_0000035,,,A process that realizes a plan which is the concretization of a plan specification.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100833,read mapping software version,read mapping software version,A data field which describes the version of the software used to map sequence reads to a reference genome or set of reference genes.,FALSE,,,,,,,PCDS:read_mapping_software_version,,,,,,,PCDS: Provide the version number of the read mapping software.,,,,,,,,,,,,,,PCDS: 2.5.1,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,read mapping software version,read mapping software version slot|read alignment software version slot|read alignment software version field,,,,GENEPIO:0100833,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,read mapping software version,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the version of the software used to map sequence reads to a reference genome or set of reference genes.,,PCDS: The version of the software used to map sequence reads to a reference genome or set of reference genes.,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490199,envelope,,A flexible container of distinctive construction and closure features used in the dispensing of tablet or powdered prescription medication; it is typically constructed of film or paper that may be coated or laminated to protect the contents [CFSAN Thesaurus].,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0199,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490199,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,envelope,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A flexible container of distinctive construction and closure features used in the dispensing of tablet or powdered prescription medication; it is typically constructed of film or paper that may be coated or laminated to protect the contents [CFSAN Thesaurus].,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001933,SOLiD System 3.0,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI SRA: AB SOLiD System 3.0,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001933,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SOLiD System 3.0,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470110,food sterilization after filling,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0110,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470110,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food sterilization after filling,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490338,imitation grease proof paper container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0338,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490338,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,imitation grease proof paper container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102203,colony forming units per 100 milliliter,,A unit of microbial density that describes the number of colony forming units within 100 milliliters of material.,FALSE,,,,,,,CFU/100 mL,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102203,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2026-04-13T19:52:38.515Z,,,,,,,,,,,,,,,,,,,colony forming units per 100 milliliter,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A unit of microbial density that describes the number of colony forming units within 100 milliliters of material.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02021432,elk retail cut,,"An elk meat cut that is derived from a sub-primal, individual muscle cut or minor primal cut.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02021432,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,elk retail cut,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An elk meat cut that is derived from a sub-primal, individual muscle cut or minor primal cut.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100145,BGI Genomics BGISEQ-500,,"A DNA sequencer manufactured by the BGI Genomics corporation that utilizes Probe-Anchor Synthesis (cPAS) chemistry and ""DNA Nanoballs"".",FALSE,,,,,,,BGISEQ-500,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100145,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,BGI Genomics BGISEQ-500,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A DNA sequencer manufactured by the BGI Genomics corporation that utilizes Probe-Anchor Synthesis (cPAS) chemistry and ""DNA Nanoballs"".",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001946,CF-T method,,Cot-filtered theoretical single-copy genomic DNA,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI SRA: CF-T,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001946,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CF-T method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Cot-filtered theoretical single-copy genomic DNA,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510076,naturally rich in fiber claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0076,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510076,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,naturally rich in fiber claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000081,sequencing kit,,"Pre-filled, ready-to-use reagent cartridges. Used to produce improved chemistry, cluster density and read length as well as improve quality (Q) scores. Reagent components are encoded to interact with the sequencing system to validate compatibility with user-defined applications.",FALSE,,,,,,,,,,,,,,,,,,,,,GROUP: IRIDA Ontology (Emma),,,,,,,MiSeq reagent kit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000081,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,,,,,,,sequencing kit,,,,,Sequencing,,,,,,,,,,,,,,,,,,,,,,Sequencing Kit,,,Derived from Illumina Sample Sheet,,"Pre-filled, ready-to-use reagent cartridges. Used to produce improved chemistry, cluster density and read length as well as improve quality (Q) scores. Reagent components are encoded to interact with the sequencing system to validate compatibility with user-defined applications.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_114,heart disease,,A cardiovascular system disease that involves the heart.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:114,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,heart disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A cardiovascular system disease that involves the heart.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03460123,alcohol-acetic acid fermentation,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=H0123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03460123,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,alcohol-acetic acid fermentation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C3426,Ulcer,ulcer|Ulcers|Ulcerative|Ulceration|Ulcerated|Ulcer|ULCER,A circumscribed inflammatory and often suppurating lesion on the skin or an internal mucous surface resulting in necrosis of tissue.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ulcer|Ulcers|Ulcerative|Ulceration|Ulcerated|Ulcer|ULCER,,,,NCIT:C3426,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Ulcer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A circumscribed inflammatory and often suppurating lesion on the skin or an internal mucous surface resulting in necrosis of tissue.,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0005087,respiratory system disorder,respiratory system disorder|respiratory system disease or disorder|respiratory system disease|respiratory disorder|respiratory disease|disorder of respiratory system|disease or disorder of respiratory system|disease of respiratory system,"A non-neoplastic or neoplastic disorder that affects the respiratory system. Representative examples include pneumonia, chronic obstructive pulmonary disease, pulmonary failure, lung adenoma, lung carcinoma, and tracheal carcinoma.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0035204|SCTID:50043002|NCIT:C26871|NANDO:1100010|MESH:D012140|MEDGEN:48421|ICD9:V47.2|ICD9:V12.60|ICD9:519.9|ICD9:519.8|ICD9:519.3|ICD9:519.1|ICD9:519|ICD9:517.8|ICD9:517|ICD9:516.9|ICD9:516.8|ICD9:516|ICD9:510-519|ICD9:508.9|ICD9:508.8|ICD9:508.1|ICD9:508|ICD9:503|ICD9:500-508|ICD9:460-519|ICD10CM:J00-J99|EFO:0000684|DOID:1579,,,,,,,,,,,,,,,,,,,,,,,,,respiratory system disorder|respiratory system disease or disorder|respiratory system disease|respiratory disorder|respiratory disease|disorder of respiratory system|disease or disorder of respiratory system|disease of respiratory system,,,,MONDO:0005087,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#rare_grouping|http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar|http://purl.oboInOwllibrary.org/oboInOwl/mondo#harrisons_view,,,,,,,,respiratory system disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A non-neoplastic or neoplastic disorder that affects the respiratory system. Representative examples include pneumonia, chronic obstructive pulmonary disease, pulmonary failure, lung adenoma, lung carcinoma, and tracheal carcinoma.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100071,obsolete: prostration,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,Replaced with entity from an appropriate domain ontology.,,,,,,,,,,,,,,,,,,,GENEPIO:0100071,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: prostration,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/HP_0025406,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001728,obsolete: swab - rectal swab,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000229,,,,,,,,,,,,,,,,,,,GENEPIO:0001728,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: swab - rectal swab,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001591,whole genomic data capture,,"Whole: the project makes use of the whole sample material (most common case). Use this for whole genome sequencing studies, transcriptome studies that are not targeting specific loci, epigenetic studies of a genome, and metagenomes or unbiased transcriptome studies of metagenomes.",FALSE,,,,,,,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/books/NBK54364/,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001591,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,whole genomic data capture,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"Whole: the project makes use of the whole sample material (most common case). Use this for whole genome sequencing studies, transcriptome studies that are not targeting specific loci, epigenetic studies of a genome, and metagenomes or unbiased transcriptome studies of metagenomes.",,,,whole,,,,
http://purl.obolibrary.org/obo/FOODON_03490371,linear low density polyethylene container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0371,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490371,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,linear low density polyethylene container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000236,beef tomahawk steak (raw),,A raw beef tomahawk steak.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000236,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef tomahawk steak (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef tomahawk steak.,,,,,,,,
http://www.ebi.ac.uk/efo/EFO_0000648,period of infection,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,efo:EFO_0000648,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,period of infection,,,,,,,,,,,,,,,,,,,,,,,,,,,,James Malone,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C116772,Early Neonatal Death,Early Neonatal Mortality|Early Neonatal Death,Death of a live newborn during the first 7 days of life.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Early Neonatal Mortality|Early Neonatal Death,,,,NCIT:C116772,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Early Neonatal Death,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Death of a live newborn during the first 7 days of life.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C116773,Late Neonatal Death,Late Neonatal Mortality|Late Neonatal Death,Death of live newborn between 7 and 27 days after birth.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Late Neonatal Mortality|Late Neonatal Death,,,,NCIT:C116773,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Late Neonatal Death,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Death of live newborn between 7 and 27 days after birth.,,,,,,,,
http://purl.obolibrary.org/obo/BTO_0002886,renal epithelium cell line,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,BTO:0002886,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/bto.owl,,,,,,,,,renal epithelium cell line,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00005621,"populated place, Colombia",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00005621,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Colombia",http://purl.obolibrary.org/obo/GAZ_00002929,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0037580,left gastric lymph node,left gastric node|aJCC level 17L node,Gastric lymph node located along the lesser curvature of stomach.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:12797,,,,,,,,,,,,,,,,,,,,,,,,,left gastric node|aJCC level 17L node,,,,UBERON:0037580,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,left gastric lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Gastric lymph node located along the lesser curvature of stomach.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000089,cubic meter per mole,m^[3]/mol|cubic metre per mole,"A molar volume unit which is equal to 1 cubic meter occupied by one mole of a substance in the form of a solid, liquid, or gas.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,m^[3]/mol|cubic metre per mole,,,,UO:0000089,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,cubic meter per mole,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A molar volume unit which is equal to 1 cubic meter occupied by one mole of a substance in the form of a solid, liquid, or gas.",,,,,,,,
http://purl.obolibrary.org/obo/UO_0000084,gram per cubic centimeter,gram per cubic centimetre|g/cm^[3],A mass unit density which is equal to mass of an object in grams divided by the volume in cubic centimeters.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,gram per cubic centimetre|g/cm^[3],,,,UO:0000084,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,gram per cubic centimeter,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A mass unit density which is equal to mass of an object in grams divided by the volume in cubic centimeters.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000083,kilogram per cubic meter,kilogram per cubic metre|kg/m^[3],A mass unit density which is equal to mass of an object in kilograms divided by the volume in cubic meters.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,kilogram per cubic metre|kg/m^[3],,,,UO:0000083,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,kilogram per cubic meter,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A mass unit density which is equal to mass of an object in kilograms divided by the volume in cubic meters.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00001714,food material component,,"Food material which normally exists as an ingredient to another food material, rather than eaten on its own.  This includes chemical food components.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00001714,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food material component,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Food material which normally exists as an ingredient to another food material, rather than eaten on its own.  This includes chemical food components.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02010139,animal breast (raw),,A whole raw animal breast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02010139,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,animal breast (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A whole raw animal breast.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100038,washout tear collection,,"A collecting specimen from organism process in which fluid is added to the eye prior to sample collection, effectively ""washing out"" ocular surface molecules.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100038,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,washout tear collection,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A collecting specimen from organism process in which fluid is added to the eye prior to sample collection, effectively ""washing out"" ocular surface molecules.",,,,,,,,
http://purl.obolibrary.org/obo/XCO_0000412,gestation,,"The state of a female and/or her offspring, and the processes which occur, during the period from conception to birth or termination of the pregnancy.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,XCO:0000412,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/xco.owl,,,,,,,,,gestation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The state of a female and/or her offspring, and the processes which occur, during the period from conception to birth or termination of the pregnancy.",,,,ongoing pregnancy,,,,
http://purl.obolibrary.org/obo/FOODON_03510117,caffeine free claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0117,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510117,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,caffeine free claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://semanticscience.org/resource/SIO_000729,record identifier,,A record identifier is an identifier for a database entry.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PulseNet: Key,,,,,,,,,,,,,,,,,,,,,,,,,,,,,resource:SIO_000729,,,,,,,,,,,,,,,,,,,,,,,,http://semanticscience.org/ontology/sio.owl,,,,,,,,,record identifier,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A record identifier is an identifier for a database entry.,,,,,,,,
http://purl.obolibrary.org/obo/GO_0032501,multicellular organismal process,organismal physiological process,"Any biological process, occurring at the level of a multicellular organism, pertinent to its function.",FALSE,,,,,,,,,,,,,,"Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GO:0050874|GO:0044707,,organismal physiological process,,,,GO:0032501,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl|http://purl.obolibrary.org/obo/nbo.owl|http://purl.obolibrary.org/obo/go.owl,http://purl.oboInOwllibrary.org/oboInOwl/go#goslim_pir|http://purl.oboInOwllibrary.org/oboInOwl/go#gocheck_do_not_annotate,,,,,,,,multicellular organismal process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Any biological process, occurring at the level of a multicellular organism, pertinent to its function.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_25022,leucomycin,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:25022,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,leucomycin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HP_0033834,Malaise,,"A feeling of general discomfort, weakness, or lack of health.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0033834,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Malaise,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A feeling of general discomfort, weakness, or lack of health.",,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0043218,neurovascular disorder,vasculature nervous system disorder|neurovascular disorder|nervous system disorder of vasculature|disease of nervous system vasculature,A disorder of the nervous system related to a vascular etiology.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C3898144|NCIT:C117007|MEDGEN:857738,,,,,,,,,,,,,,,,,,,,,,,,,vasculature nervous system disorder|neurovascular disorder|nervous system disorder of vasculature|disease of nervous system vasculature,,,,MONDO:0043218,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,neurovascular disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A disorder of the nervous system related to a vascular etiology.,,,,,,,,
http://purl.obolibrary.org/obo/OBA_2040167,age of onset of cervical dystonia,age cervical dystonia symptoms begin|age at onset of cervical dystonia,The age at which cervical dystonia manifestations first appear.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,age cervical dystonia symptoms begin|age at onset of cervical dystonia,,,,OBA:2040167,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age of onset of cervical dystonia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The age at which cervical dystonia manifestations first appear.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C27669,Respiratory and Thoracic Disorder,"Respiratory, Thoracic, and Mediastinal Disorder|Respiratory, Thoracic, and Mediastinal Disease|Respiratory and Thoracic Disorder|Respiratory and Thoracic Disease",A non-neoplastic or neoplastic disorder that affects the respiratory system or the thoracic organs.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Respiratory, Thoracic, and Mediastinal Disorder|Respiratory, Thoracic, and Mediastinal Disease|Respiratory and Thoracic Disorder|Respiratory and Thoracic Disease",,,,NCIT:C27669,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Respiratory and Thoracic Disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A non-neoplastic or neoplastic disorder that affects the respiratory system or the thoracic organs.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000065,beef denver steak,,A beef cut from the center of the under blade.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000065,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef denver steak,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A beef cut from the center of the under blade.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_83811,proteinogenic amino acid derivative,,"Any derivative of a proteinogenic amino acid resulting from reaction at an amino group, carboxy group, or a side-chain functional group, or from the replacement of any hydrogen by a heteroatom.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:83811,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,proteinogenic amino acid derivative,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Any derivative of a proteinogenic amino acid resulting from reaction at an amino group, carboxy group, or a side-chain functional group, or from the replacement of any hydrogen by a heteroatom.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470136,food freezing,,Preservation by freezing a food product and keeping it at a temperature below the freezing point (20-30 degrees F) without regard to the product's physical state.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0136,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470136,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food freezing,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Preservation by freezing a food product and keeping it at a temperature below the freezing point (20-30 degrees F) without regard to the product's physical state.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490375,biaxial oriented polypropylene container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0375,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490375,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,biaxial oriented polypropylene container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000175,gram per liter,gram per litre|g/L,A mass unit density which is equal to mass of an object in grams divided by the volume in liters.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,gram per litre|g/L,,,,UO:0000175,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,gram per liter,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A mass unit density which is equal to mass of an object in grams divided by the volume in liters.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000174,kilogram per liter,kilogram per litre|kg/L,A mass unit density which is equal to mass of an object in kilograms divided by the volume in liters.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,kilogram per litre|kg/L,,,,UO:0000174,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,kilogram per liter,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A mass unit density which is equal to mass of an object in kilograms divided by the volume in liters.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000173,gram per milliliter,gram per millilitre|g/ml,A mass unit density which is equal to mass of an object in grams divided by the volume in milliliter.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,gram per millilitre|g/ml,,,,UO:0000173,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,gram per milliliter,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A mass unit density which is equal to mass of an object in grams divided by the volume in milliliter.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000176,milligram per milliliter,milligram per millilitre|mg/ml,A mass unit density which is equal to mass of an object in milligrams divided by the volume in milliliters.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,milligram per millilitre|mg/ml,,,,UO:0000176,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,milligram per milliliter,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A mass unit density which is equal to mass of an object in milligrams divided by the volume in milliliters.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C43167,Bag,Bag|BAG,A sac or pouch.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Bag|BAG,,,,NCIT:C43167,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Bag,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A sac or pouch.,,,,,,,,
http://purl.obolibrary.org/obo/APOLLO_SV_00000470,probability,,"A data item that is about a proposition and has a numeric value between 0 and 1, inclusive, that is the output of some process of inference, such that 1) logical falsehoods and logical truths are assigned a value of 0 and 1, respectively, while contingent propositions are assigned some intermediate value; and 2) the process of inference conforms with rules for the calculation of probabilities, and that any interpretation of probability must specify the extent to which probabilities might be used to constrain the degrees of belief of rational agents.",FALSE,,,,,,,,,,,,,,"The first criterion is derived from Kolmogorov's Probability Calculus, while the second is derived from Salmon's Admissibility and Applicability Criteria of Adequacy. Salmon's ascertainability criterion is subsumed by the definition for 'data item'.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,APOLLO_SV:00000470,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/apollo_sv.owl,,,,,,,,,probability,,,,,,,,,,,,,,,,,,,,,,,,,,,,William R. Hogan|Matthew Diller,,,,"A data item that is about a proposition and has a numeric value between 0 and 1, inclusive, that is the output of some process of inference, such that 1) logical falsehoods and logical truths are assigned a value of 0 and 1, respectively, while contingent propositions are assigned some intermediate value; and 2) the process of inference conforms with rules for the calculation of probabilities, and that any interpretation of probability must specify the extent to which probabilities might be used to constrain the degrees of belief of rational agents.",,,,,,,,
http://purl.obolibrary.org/obo/CL_0001034,cell in vitro,,A cell that is maintained or propagated in a controlled artificial environment for use in an investigation.,FALSE,,,,,,,,,,,,,,"'In vitro', translating literally to 'in glass', typically refers to a controlled, often sterile, laboratory setting where cells or other specimens are placed by some agent for the purpose of studying or manipulating them as part of some research investigation. 'In vitro' is intended to contrast with 'native',which refers to cells or other biological entities that are found in a natural setting. It describes unicellular organisms removed from a natural environement and multicellular organism cells removed from an organism, or cells derived in culture from such displaced cells.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CL:0001034,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/clo.owl,,,,,,,,,cell in vitro,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A cell that is maintained or propagated in a controlled artificial environment for use in an investigation.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000149,beef top sirloin steak,,A steak cut from the beef top sirloin butt that is flavourful and juicy.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000149,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef top sirloin steak,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A steak cut from the beef top sirloin butt that is flavourful and juicy.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_33256,primary amide,,A derivative of an oxoacid R<small><sub><em>k</em></sub></small>E(=O)<small><sub><em>l</em></sub></small>(OH)<small><sub><em>m</em></sub></small> (<em>l</em> ≠ 0) in which an acidic hydroxy group has been replaced by an amino or substituted amino group.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:33256,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,primary amide,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A derivative of an oxoacid R<small><sub><em>k</em></sub></small>E(=O)<small><sub><em>l</em></sub></small>(OH)<small><sub><em>m</em></sub></small> (<em>l</em> ≠ 0) in which an acidic hydroxy group has been replaced by an amino or substituted amino group.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C131759,Bone Marrow Transplant Recipient,Bone Marrow Transplantation Recipient|Bone Marrow Transplant Recipient,An individual receiving a bone marrow transplant.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Bone Marrow Transplantation Recipient|Bone Marrow Transplant Recipient,,,,NCIT:C131759,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Bone Marrow Transplant Recipient,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An individual receiving a bone marrow transplant.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0005090,muscle structure,musculus,"Muscle structures are contractile cells, tissues or organs that are found in multicellular organisms[GO].",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:30316,,,,,,,,,,,,,,,,,,,,,,,,,musculus,,,,UBERON:0005090,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,muscle structure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Muscle structures are contractile cells, tissues or organs that are found in multicellular organisms[GO].",,,,,,,,
http://purl.obolibrary.org/obo/HP_6000633,High-pitched bowel sounds,,Abnormal bowel sounds of an unually high frequency.,FALSE,,,,,,,,,,,,,,This finding is characteristic of Ogilvie syndrome.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:6000633,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,High-pitched bowel sounds,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Abnormal bowel sounds of an unually high frequency.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102141,antibody symbol,antibody symbol 3|antibody symbol 2|antibody symbol 1,PCDS: Select a gene name value from the pick list provided.,FALSE,,,,,,,PCDS:antibody_symbol_*,,,,,,,PCDS: Select a gene name value from the pick list provided.,,,,,,,,,,,,,,PCDS: Not Applicable,,,uncurated,,,,,,,,,,,,,,,,,,,,,,,,,,antibody symbol 3|antibody symbol 2|antibody symbol 1,,,,GENEPIO:0102141,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-1107-9135,2026-04-13T17:18:02.461Z,,,,,,,,,,,,,,,,,,,antibody symbol,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PCDS: The symbol of the gene used in the diagnostic RT-PCR test.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100518,AMR testing resistant breakpoint,antimicrobial resistance testing resistant breakpoint|AMR_testing_resistant_breakpoint|AMR testing resistant breakpoint,An antimicrobial resistance (AMR) field which describes minimum measurement for a sample to be considered “resistant” to this antibiotic.,FALSE,,,,,,,PCDS:amr_testing_resistant_breakpoint|PCDS:*_resistant_breakpoint,,,,,,,"PCDS: This field should only contain a number (either an integer or a number with decimals), since the '>=' qualifier is implied.",,,,,,,,,,,Dependent on the units specified in the 'AMR measurement units field' [GENEPIO:0100523].,,,PCDS: 32,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,antimicrobial resistance testing resistant breakpoint|AMR_testing_resistant_breakpoint|AMR testing resistant breakpoint,antimicrobial resistance testing resistant breakpoint slot|antimicrobial resistance testing resistant breakpoint field|AMR testing resistant breakpoint slot,,,,GENEPIO:0100518,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-12-22T00:55:53.808Z,,,,,,,,,,,,,,,,,,,AMR testing resistant breakpoint,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An antimicrobial resistance (AMR) field which describes minimum measurement for a sample to be considered “resistant” to this antibiotic.,,"PCDS: The minimum measurement, in the units specified in the ""AMR_measurement_units"" field, for a sample to be considered ""resistant"" to this antibiotic",,,,,,
http://purl.obolibrary.org/obo/HP_0025033,Abnormal digestive system morphology,Abnormality of digestive system morphology,A structural anomaly of the digestive system.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Abnormality of digestive system morphology,,,,HP:0025033,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal digestive system morphology,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A structural anomaly of the digestive system.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0025032,Abnormality of digestive system physiology,,A functional anomaly of the digestive system.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0025032,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormality of digestive system physiology,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A functional anomaly of the digestive system.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0025031,Abnormality of the digestive system,,"Any anomaly of the digestive system, a collection of organs that is made up of the gastrointestinal tract and the liver, pancreas, and gallbladder. The gastrointestinal tract is a series of hollow organs joined in a long, twisting tube from the mouth to the anus, including the mouth, esophagus, stomach, small intestine, large intestine and anus.",FALSE,,,,,,,,,,,,,,"Any anomaly of the digestive system, a collection of organs that is made up of the gastrointestinal tract and the liver, pancreas, and gallbladder. The gastrointestinal tract is a series of hollow organs joined in a long, twisting tube from the mouth to the anus, including the mouth, esophagus, stomach, small intestine, large intestine and anus.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0025031,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormality of the digestive system,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002120,tube containing media or preservative,,A tube that contains media or preservative,FALSE,,,,,,,,,,,,,,NOTE: there are different types of tubes with coloured caps indicating different preservatives etc.,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,tube containing media or preservative,,,,,,,,,,,,,,,,,,,,,,,,,,,,Emma Griffiths,,,,A tube that contains media or preservative,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490204,can (container),,A container which is made of a thin metal and and is used for the distribution or storage of goods.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0204,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490204,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,can (container),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A container which is made of a thin metal and and is used for the distribution or storage of goods.,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_116058,Mus musculus brevirostris,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,Mus musculus brevirostris,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:116058,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Mus musculus brevirostris,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_13258,typhoid fever,,"A primary bacterial infectious disease that is a communicable systemic illness, has_material_basis_in Salmonella enterica subsp enterica serovar Typhi, which is transmitted_by ingestion of food or water contaminated with the feces of an infected person. The infection has_symptom fever, has_symptom diarrhea, has_symptom prostration, has_symptom headache, has_symptom splenomegaly, has_symptom liver enlargement, has_symptom eruption of rose-colored spots, and has_symptom leukopenia.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:13258,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,typhoid fever,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A primary bacterial infectious disease that is a communicable systemic illness, has_material_basis_in Salmonella enterica subsp enterica serovar Typhi, which is transmitted_by ingestion of food or water contaminated with the feces of an infected person. The infection has_symptom fever, has_symptom diarrhea, has_symptom prostration, has_symptom headache, has_symptom splenomegaly, has_symptom liver enlargement, has_symptom eruption of rose-colored spots, and has_symptom leukopenia.",,,,,,,,
http://purl.obolibrary.org/obo/ENVO_03501152,intensive care unit facility,intensive treatment ward|intensive treatment unit|intensive therapy unit|intensive care ward|critical care ward|critical care unit|ITU|ICW|ICU,A hospital unit facility which is used to provide intensive medical care.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,intensive treatment ward|intensive treatment unit|intensive therapy unit|intensive care ward|critical care ward|critical care unit|ITU|ICW|ICU,,,,ENVO:03501152,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,intensive care unit facility,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A hospital unit facility which is used to provide intensive medical care.,,,,,,,,
http://purl.obolibrary.org/obo/ARO_3007569,BIOMIC Microbiology System,,Specific automated system of analysis for determining antimicrobial susceptibility developed by Giles Scientific.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ARO:3007569,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/aro.owl,,,,,,,,,BIOMIC Microbiology System,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Specific automated system of analysis for determining antimicrobial susceptibility developed by Giles Scientific.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001205,dietary restriction,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001205,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,dietary restriction,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/IDO_0000504,infectious disorder,,An infection that is clinically abnormal.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,IDO:0000504,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ido.owl,,,,,,,,,infectious disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,Lindsay Cowell|Alexander Diehl|Albert Goldfain,,,,An infection that is clinically abnormal.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002101,test drug minimum concentration,,A data item which describes the minimum concentration of a drug applied during an an assay,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002101,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,test drug minimum concentration,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A data item which describes the minimum concentration of a drug applied during an an assay,,,,,,,,
http://www.ebi.ac.uk/efo/EFO_0001444,measurement,,A measurement is an information entity that is a recording of the output of a measurement such as produced by an instrument.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SNOMEDCT:122869004|NIFSTD:sao279801585|NCIt:C25209|MO:144,,,,,,,,,,,,,,,,,,,,,,,,,,,,,efo:EFO_0001444,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,measurement,,,,,,,,,,,,,,,,,,,,,,,,,,,,Tomasz Adamusiak|Jie Zheng|James Malone|,,,,A measurement is an information entity that is a recording of the output of a measurement such as produced by an instrument.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001710,Xbal,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001710,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Xbal,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001694,listeria serotype 1/2,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001694,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,listeria serotype 1/2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020521,piece of turkey breast (raw),,A raw piece of a turkey breast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020521,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of turkey breast (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw piece of a turkey breast.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000117,beef loin (raw),,A raw beef loin cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000117,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef loin (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef loin cut.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00007610,"populated place, Algeria",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00007610,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Algeria",http://purl.obolibrary.org/obo/GAZ_00000563,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000109,beef chuck arm steak,,A steak cut from the arm bone (humerus) of the upper forelimb.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000109,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef chuck arm steak,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A steak cut from the arm bone (humerus) of the upper forelimb.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_19129,11alpha-hydroxy steroid,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:19129,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,11alpha-hydroxy steroid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001949,HMPR method,,Hypo-methylated partial restriction digest,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI SRA: HMPR,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001949,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HMPR method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Hypo-methylated partial restriction digest,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490352,coextruded paper-aluminium-plastic wrapper,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0352,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490352,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,coextruded paper-aluminium-plastic wrapper,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000423,bison retail cut,,"A bison meat cut that is derived from a sub-primal, individual muscle cut or minor primal cut.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000423,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,bison retail cut,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A bison meat cut that is derived from a sub-primal, individual muscle cut or minor primal cut.",,,,,,,,
http://purl.obolibrary.org/obo/BFO_0000141,immaterial entity,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,BFO:0000141,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl|http://purl.obolibrary.org/obo/pco.owl|http://purl.obolibrary.org/obo/pato.owl|http://purl.obolibrary.org/obo/mondo.owl|http://purl.obolibrary.org/obo/foodon.owl|http://purl.obolibrary.org/obo/cob.owl|http://purl.obolibrary.org/obo/apollo_sv.owl,,,,,,,,,immaterial entity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_37773,organic phosphoramidate,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:37773,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,organic phosphoramidate,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HP_0032546,Abdominal guarding,,A voluntary contraction of the abdominal wall musculature to avoid pain.,FALSE,,,,,,,,,,,,,,"Abdominal guarding tends to be generalized over the entire abdomen. In contrast to abdominal rigidity, guarding can often be overcome by having the patient purposely relax the muscles; rigidity cannot be.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0032546,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abdominal guarding,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A voluntary contraction of the abdominal wall musculature to avoid pain.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0032545,Abdominal rigidity,Rigid abdomen,Involuntary tightening of the abdominal musculature that occurs in response to touching the abdomen to avoid pain. Rigidity can occur in the presence of abdominal inflammation and usually involves only the inflamed area.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Rigid abdomen,,,,HP:0032545,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abdominal rigidity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Involuntary tightening of the abdominal musculature that occurs in response to touching the abdomen to avoid pain. Rigidity can occur in the presence of abdominal inflammation and usually involves only the inflamed area.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020189,piece of chicken organ,,A piece of a chicken organ.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020189,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of chicken organ,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A piece of a chicken organ.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510199,vegan/vegetarian or suitability for vegan/vegetarian claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0199,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510199,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,vegan/vegetarian or suitability for vegan/vegetarian claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03450046,blind baking,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=G0046,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03450046,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,blind baking,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001297,outbreak exposure event location,,A type of built structure that is suspected to be related to an outbreak investigation.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001297,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,outbreak exposure event location,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ENVO_00000070,,,,,,Damion Dooley,,,,A type of built structure that is suspected to be related to an outbreak investigation.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001449,amplicon size,amplicon size,A data field which describes the length of the amplicon generated by polymerase chain reaction (PCR) amplification.,FALSE,,,,,,,PCDS:amplicon_size,,,,,,,"PCDS: Provide the amplicon size as a numeric value, measured in base pairs.",,,,,,,,,,,,,,PCDS: 300,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,amplicon size,amplicon size slot,,,,GENEPIO:0001449,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,amplicon size,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the length of the amplicon generated by polymerase chain reaction (PCR) amplification.,,PCDS: The length of the amplicon generated by PCR amplification.,,,,,,
http://purl.obolibrary.org/obo/OBI_0002027,Illumina Genome Analyzer IIe,,"An Illumina Genome Analyzer II which is manufactured by the Illumina corporation. It supports sequencing of single, long or short insert paired end clone libraries relying on sequencing by synthesis technology. The Genome Analyzer IIe makes industry-leading next-generation sequencing technology accessible to more laboratories.",FALSE,,,,,,,Illumina GA IIe|Genome Analyzer IIe,,,,,,,,,,,,,,http://res.illumina.com/documents/products/datasheets/datasheet_genome_analyzer_iie.pdf,,,,,Illumina Genome Analyzer IIe,,,,,http://purl.obolibrary.org/obo/IAO_0000120,NCBI SRA: Illumina Genome Analyzer IIe,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0002027,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Illumina Genome Analyzer IIe,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Person: Venkat Malladi, Chris Stoeckert, Jie Zheng",,,,"An Illumina Genome Analyzer II which is manufactured by the Illumina corporation. It supports sequencing of single, long or short insert paired end clone libraries relying on sequencing by synthesis technology. The Genome Analyzer IIe makes industry-leading next-generation sequencing technology accessible to more laboratories.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100566,sequence flagged for potential quality control issues datum,,A data item which is a statement confirming that quality control processes were carried out however it is unclear whether the sequence meets the assessment criteria and the assessment requires review.,FALSE,,,,,,,sequence flagged for potential quality control issues,,,,,,,"Example: This statement may be used in conjunction with other quality control determination statements to indicate potential sequence quality issues. Note: quality control here refers to quality of the raw reads, consensus sequence or assembly, not the qaulity of analytical results e.g. lineage assignment.",,,,,,,,,,,,,,,,,ready for release,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100566,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-1107-9135,2023-01-23T00:42:19.315Z,,,,,,,,,,,,,,,,,,,sequence flagged for potential quality control issues datum,,,,,,,,,,,,,,,,,,,,,,The PHA4GE QC Contextual Data Tags Specification: https://github.com/pha4ge/contextual-data-qc-tags,,,,,,,,,,A data item which is a statement confirming that quality control processes were carried out however it is unclear whether the sequence meets the assessment criteria and the assessment requires review.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000658,dense settlement,,A settlement with a high density of buildings and inhabitants.,FALSE,,,,,,,,,,,,,,"The thresholds for what makes a settlment ""dense"" can be determined as needed. If there is a specific threshold that should be added to ENVO, please make a new class request.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01000658,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,dense settlement,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A settlement with a high density of buildings and inhabitants.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001227,obsolete: food cooking method,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001227,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: food cooking method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/FOODON_03450002,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510217,food allergen labelling about fish and products thereof,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0217,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510217,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food allergen labelling about fish and products thereof,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00004530,piece of cow,,A severed part of a beef.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00004530,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of cow,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A severed part of a beef.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0001977,blood serum,serum,The portion of blood plasma that excludes clotting factors.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Serum_(blood)|UMLS:C0229671|NCIT:C13325|MESH:D044967|MA:0002502|FMA:63083|EMAPA:35770|EHDAA2:0004728|CALOHA:TS-0923|BTO:0001239|BTO:0000133,,,,,,,,,,,,,,,,,,,,,,,,,serum,,,,UBERON:0001977,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,blood serum,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The portion of blood plasma that excludes clotting factors.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001800,sequence identifier,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001800,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,sequence identifier,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000200,Pygmy Southern,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000200,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Pygmy Southern,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000207,Banyarwanda,,A Bantu Eastern population with a population size of 15.109 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000207,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Banyarwanda,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Bantu Eastern population with a population size of 15.109 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000203,Akan,,A Western African population with a population size of 20 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000203,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Akan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Western African population with a population size of 20 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000206,Songhai,,A Nilotic Western population with a population size of 5 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000206,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Songhai,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Nilotic Western population with a population size of 5 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000201,Senufo,,The Senufo are a Western African population with a population size of 2 million.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000201,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Senufo,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The Senufo are a Western African population with a population size of 2 million.,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000204,Daza,,A Toubou population with a population size of Nilo-Saharan,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000204,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Daza,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Toubou population with a population size of Nilo-Saharan,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000209,Ari,,A Eastern African population with a population size of 0.462 million,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000209,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Ari,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Eastern African population with a population size of 0.462 million,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000205,Jola,,A Western African population with a population size of 0.5 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000205,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Jola,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Western African population with a population size of 0.5 millions,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000108,obsolete: PulseNet data item,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000103,,,,,,,,,,,,,,,,,,,GENEPIO:0000108,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: PulseNet data item,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0001839,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001925,earth area boundary census,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0001996,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001925,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,earth area boundary census,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03500043,food-grade tin surface,,A surface made out of food-grade tin metal.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=N0043,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03500043,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food-grade tin surface,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A surface made out of food-grade tin metal.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510159,other special claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0159,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510159,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,other special claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020977,"beef roast (boneless, raw)",,A raw and boneless beef roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020977,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"beef roast (boneless, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw and boneless beef roast.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00002173,hospital,,A hospital is a building in which health care services are  provided by specialized staff and equipment.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Hospital,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00002173,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,hospital,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A hospital is a building in which health care services are  provided by specialized staff and equipment.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_23451,cyclitol,,"A polyol consisting of a cycloalkane containing at least three hydroxy groups, each attached to a different ring carbon atom.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:23451,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,cyclitol,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A polyol consisting of a cycloalkane containing at least three hydroxy groups, each attached to a different ring carbon atom.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470158,pasteurization by heat after filling,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0158,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470158,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pasteurization by heat after filling,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://www.ebi.ac.uk/efo/EFO_0004953,date of diagnosis,,The point at which a clinical diagnosis is made.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SNOMEDCT:432213005,,,,,,,,,,,,,,,,,,,,,,,,,,,,,efo:EFO_0004953,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,date of diagnosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,Helen Parkinson,,,,The point at which a clinical diagnosis is made.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020050,avian material,,Material that derives from some avian animal.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020050,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,avian material,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Material that derives from some avian animal.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C49165,Surgical Procedure by Method,Surgical Procedure by Method,A categorization of surgical procedures based on surgical techniques.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Surgical Procedure by Method,,,,NCIT:C49165,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Surgical Procedure by Method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A categorization of surgical procedures based on surgical techniques.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0002733,Abnormal lymph node morphology,Abnormality of the lymph nodes|Abnormal lymph node histology,A structural lymph node abnormality.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0149727,,,,,,,,,,,,,,,,,,,,,,,HP:0008149,,Abnormality of the lymph nodes|Abnormal lymph node histology,,,,HP:0002733,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal lymph node morphology,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A structural lymph node abnormality.,,,,,,,,
http://purl.obolibrary.org/obo/BTO_0002181,HEK-293T cell,,"A highly transformed human renal epithelial line expressing two viral oncogenes, adenovirus E1a and SV40 large T antigen.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,BTO:0002181,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/bto.owl,,,,,,,,,HEK-293T cell,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A highly transformed human renal epithelial line expressing two viral oncogenes, adenovirus E1a and SV40 large T antigen.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C124643,Late Intrauterine Death,Late Intrauterine Death|Late IUD|LATE INTRAUTERINE DEATH,A death of the fetus occurring inside the uterus.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Late Intrauterine Death|Late IUD|LATE INTRAUTERINE DEATH,,,,NCIT:C124643,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Late Intrauterine Death,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A death of the fetus occurring inside the uterus.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490388,epoxy resin container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0388,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490388,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,epoxy resin container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100460,irida project id,IRIDA project identifier|IRIDA project ID,A data field which describes the identifier of the project in the Integrated Rapid Infectious Disease Analysis (IRIDA) platform.,FALSE,,,,,,,PCDS:irida_project_id,,,,,,,PCDS: Provide the IRIDA 'project ID'.,,,,,,,,,,,,,,PCDS: 666,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,IRIDA project identifier|IRIDA project ID,Integrated Rapid Infectious Disease Analysis project identifier slot|Integrated Rapid Infectious Disease Analysis project identifier field|Integrated Rapid Infectious Disease Analysis project ID slot|Integrated Rapid Infectious Disease Analysis project ID field|IRIDA project identifier slot|IRIDA project identifier field|IRIDA project ID slot,,,,GENEPIO:0100460,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,irida project id,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the identifier of the project in the Integrated Rapid Infectious Disease Analysis (IRIDA) platform.,,PCDS: The identifier of the Project in the iRIDA platform.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001092,substantial alcohol use/abuse status,,"",FALSE,,,,,,,,,,,,,,,,,,,,,"",,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001092,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,substantial alcohol use/abuse status,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510074,no palm oil added claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0074,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510074,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,no palm oil added claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100963,diagnostic measurement value,diagnostic measurement value 3|diagnostic measurement value 2|diagnostic measurement value 1,A data field which describes the numerical value of the result from a diagnostic test.,FALSE,,,,,,,PCDS:diagnostic_measurement_value_*,,,,,,,PCDS: Provide the numerical result of a diagnostic test (no need to include units).,,,,,,,,,,,,,,PCDS: 1000,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,diagnostic measurement value 3|diagnostic measurement value 2|diagnostic measurement value 1,,,,GENEPIO:0100963,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,diagnostic measurement value,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the numerical value of the result from a diagnostic test.,,PCDS: The value of the result from a diagnostic test.,,,,,,
http://purl.obolibrary.org/obo/UBERON_0001245,anus,opening of terminal part of digestive tract|anal orifice|anal opening,"Orifice at the opposite end of an animal's digestive tract from the mouth. Its function is to expel feces, unwanted semi-solid matter produced during digestion, which, depending on the type of animal, may be one or more of: matter which the animal cannot digest, such as bones; food material after all the nutrients have been extracted, for example cellulose or lignin; ingested matter which would be toxic if it remained in the digestive tract; and dead or excess gut bacteria and other endosymbionts.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:Anus|Wikipedia:Anus|WBbt:0005364|UMLS:C0003461|TGMA:0001279|TADS:0000066|SCTID:181262009|NCIT:C43362|MA:0000331|GAID:312|FMA:15711|FBbt:00047153|EV:0100082|CALOHA:TS-2005|BTO:0001680,,,,,,,,,,,,,,,,,,,,,,,,,opening of terminal part of digestive tract|anal orifice|anal opening,,,,UBERON:0001245,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,anus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Orifice at the opposite end of an animal's digestive tract from the mouth. Its function is to expel feces, unwanted semi-solid matter produced during digestion, which, depending on the type of animal, may be one or more of: matter which the animal cannot digest, such as bones; food material after all the nutrients have been extracted, for example cellulose or lignin; ingested matter which would be toxic if it remained in the digestive tract; and dead or excess gut bacteria and other endosymbionts.",,,,,,,,
http://purl.obolibrary.org/obo/IDO_0000543,vehicle of infectious agent,,A material entity bearing an infectious agent vehicle role.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,IDO:0000543,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ido.owl,,,,,,,,,vehicle of infectious agent,,,,,,,,,,,,,,,,,,,,,,,,,,,,Lindsay Cowell|Alexander Diehl|Albert Goldfain,,,,A material entity bearing an infectious agent vehicle role.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0101203,insdc sequence read accession,,"A unique identifier assigned by the International Nucleotide Sequence Database Collaboration (INSDC) to a raw sequence read, representing a single experimentally derived nucleotide sequence.",FALSE,,,,,,,PCDS:insdc_sequence_read_accession,,,,,,,"PCDS: Store the accession assigned to the submitted sequence. European Nucleotide Archive (ENA) sequence accessions start with ERR, NCBI-SRA accessions start with SRR, DNA Data Bank of Japan (DDBJ) accessions start with DRR and Genome Sequence Archive (GSA) accessions start with CRR.",,,,,,,,,,,,,,"PCDS: ERR123456, DRR123456, CRR123456",,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0101203,,,,,,,,,,,,,,2026-04-09T18:02:29.914Z,,,,,,,,,,,,,,,,,,,insdc sequence read accession,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A unique identifier assigned by the International Nucleotide Sequence Database Collaboration (INSDC) to a raw sequence read, representing a single experimentally derived nucleotide sequence.",,PCDS: The identifier assigned to a sequence in one of the International Nucleotide Sequence Database Collaboration (INSDC) repositories.,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000053,beef chuck roll (raw),,A raw beef chuck roll cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000053,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef chuck roll (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef chuck roll cut.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001482,number of base pairs sequenced,number of base pairs sequenced,A data field which describes the number of total base pairs generated by the sequencing process.,FALSE,,,,,,,PCDS:number_of_base_pairs_sequenced,,,,,,,PCDS: Provide a numerical value (no need to include units).,,,,,,,,,,,,,,PCDS: 387566,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,number of base pairs sequenced,number of base pairs sequenced slot,,,,GENEPIO:0001482,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,number of base pairs sequenced,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the number of total base pairs generated by the sequencing process.,,PCDS: The number of total base pairs generated by the sequencing process.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001665,antibiotics required,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"This is problematic - its not clear if this is reporting that antibiotics were administered, or whether they are recommended as a result of diagnosis.",,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001665,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,antibiotics required,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C15416,Active Immunization,Active Immunization,Deliberate stimulation of a host's immune response via administration of antigens or immunologic adjuvants.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Active Immunization,,,,NCIT:C15416,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Active Immunization,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Deliberate stimulation of a host's immune response via administration of antigens or immunologic adjuvants.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000922,animal cage,chicken cage,"A manufactured cage which may be used to confine, contain, or protect an animal.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,cage,,chicken cage,,,ENVO:01000922,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,animal cage,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A manufactured cage which may be used to confine, contain, or protect an animal.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_23763,pyrroline,,Any organic heteromonocyclic compound with a structure based on a dihydropyrrole.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:23763,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,pyrroline,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any organic heteromonocyclic compound with a structure based on a dihydropyrrole.,,,,,,,,
http://www.ebi.ac.uk/efo/EFO_0004557,population measurement,,Is the quantification of some measureable quality of a population e.g. birth rate.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,efo:EFO_0004557,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,population measurement,,,,,,,,,,,,,,,,,,,,,,,,,,,,Helen Parkinson,,,,Is the quantification of some measureable quality of a population e.g. birth rate.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002230,Salmonella subspecies,,A datum indicating one of six defined subspecies of Salmonella.,FALSE,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Salmonella,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002230,,,,,,,,,,,,,,2019-11-25T08:45:41Z,,,,,,,,,,,,,,,,,,,Salmonella subspecies,,,,,,,,,,,,,,,,,,,,,,https://www.researchgate.net/publication/267739557_Salmonella-Host_Interactions_-_Modulation_of_the_Host_Innate_Immune_System/figures?lo=1,,,,,,http://orcid.org/0000-0002-8844-9165,,,,A datum indicating one of six defined subspecies of Salmonella.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00004540,bison sub-primal cut,,A smaller cut of meat that is obtained from the larger primal cut of a bison.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00004540,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,bison sub-primal cut,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A smaller cut of meat that is obtained from the larger primal cut of a bison.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000054,Stx toxin type datum,,A pathogenic shiga toxin produced by STEC E. coli.,FALSE,,,,,,,,,,,,,,,,,,,,,GROUP: IRIDA Ontology (Emma),,,,,,,Stx1 or Stx2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000054,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,http://purl.obolibrary.org/obo/NCIT_C1225,,,,,,Stx toxin type datum,,,,,Lab Analytic,,,,,,,,,,,,,,,,,,,,,,Stx toxin type,,,metadata feedback,,A pathogenic shiga toxin produced by STEC E. coli.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C25621,Postal Code,Postal code|Postal Code,Any system designed to expedite the sorting and delivery of mail by assigning a series of alphanumeric codes to each delivery area. Also used to refer to any individual delivery area code.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Postal code|Postal Code,,,,NCIT:C25621,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Postal Code,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any system designed to expedite the sorting and delivery of mail by assigning a series of alphanumeric codes to each delivery area. Also used to refer to any individual delivery area code.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_8470000,placental blood,,Blood located in the placenta.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:8470000,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,placental blood,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Blood located in the placenta.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_8470001,sublumbar lymph node,,"A lymph node with a lymph center located within the caudal abdomen and pelvis, on the ventral side of the lumbar region. Includes the medial iliac, internal iliac (previously termed hypogastric) and sacral lymph nodes.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:8470001,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,sublumbar lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A lymph node with a lymph center located within the caudal abdomen and pelvis, on the ventral side of the lumbar region. Includes the medial iliac, internal iliac (previously termed hypogastric) and sacral lymph nodes.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490121,"glass container, cork stopper",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0121,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490121,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"glass container, cork stopper",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_49566,cloxacillin,,A semisynthetic penicillin antibiotic carrying a 3-(2-chlorophenyl)-5-methylisoxazole-4-carboxamido group at position 6.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:49565|CHEBI:3765,,,,,,CHEBI:49566,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,cloxacillin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A semisynthetic penicillin antibiotic carrying a 3-(2-chlorophenyl)-5-methylisoxazole-4-carboxamido group at position 6.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_33552,sulfonic acid derivative,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:33552,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,sulfonic acid derivative,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_03000117,channel,,"A structure which traverses a mass of one or more environmental materials, and encloses a roughly tubular site.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:03000117,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,envoPolar,,,,,,,,channel,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://orcid.org/0000-0002-3410-4655|https://orcid.org/0000-0002-4366-3088,,,,"A structure which traverses a mass of one or more environmental materials, and encloses a roughly tubular site.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100453,strain and isolation information field category,host (food production name)|PCDS:pathogen diagnostic testing,A data field category which refers to strain and isolation information fields.,FALSE,,,,,,,PCDS:strain_and_isolation_information_slot_group,,,,,,,,,,,,,,,,,,,,,,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,host (food production name)|PCDS:pathogen diagnostic testing,host (food production name) slot,,,,GENEPIO:0100453,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,strain and isolation information field category,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field category which refers to strain and isolation information fields.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_24613,homodetic cyclic peptide,,A homodetic cyclic peptide is a cyclic peptide in which the ring consists solely of amino-acid residues in peptide linkages.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:24613,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,homodetic cyclic peptide,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A homodetic cyclic peptide is a cyclic peptide in which the ring consists solely of amino-acid residues in peptide linkages.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03303012,chicken breast (raw),,A whole raw chicken breast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://bioregistry.io/reference/siren:F3012,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03303012,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,chicken breast (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A whole raw chicken breast.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0000982,skeletal joint,joint|articulation,"Anatomical structure that consists of two or more adjacent skeletal structures, which may be interconnected by various types of tissue[VSAO].",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:Joint|ZFA:0001596|XAO:0000171|Wikipedia:Joint|VSAO:0000101|VHOG:0001276|UMLS:C0022417|TAO:0000367|SCTID:302536002|RETIRED_EHDAA2:0003182|NCIT:C13044|MIAA:0000188|MESH:D007596|MAT:0000188|MA:0000319|GAID:102|FMA:7490|EMAPA:35456|EFO:0000948|CALOHA:TS-2023|BTO:0001686|AEO:0000182,,,,,,,,,,,,,,,,,,,,,,,,joint|articulation,,,,,UBERON:0000982,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,skeletal joint,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Anatomical structure that consists of two or more adjacent skeletal structures, which may be interconnected by various types of tissue[VSAO].",,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000113,Oromo,,A Cushitic Eastern population with a population size of 40 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000113,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Oromo,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Cushitic Eastern population with a population size of 40 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000112,Meru,,A Bantu Eastern population with a population size of 2.7 Millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000112,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Meru,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Bantu Eastern population with a population size of 2.7 Millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000116,Xhosa,,A Nguni population with a population size of 7.9 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000116,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Xhosa,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Nguni population with a population size of 7.9 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000115,Fur,,A Nilotic Eastern population with a population size of 1 million,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000115,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Fur,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Nilotic Eastern population with a population size of 1 million,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100463,isolated by contact name,isolated_by_contact_name|isolated by contact name,A data field which describes the name or title of the contact responsible for follow-up regarding the isolate.,FALSE,,,,,,,PCDS:isolated_by_contact_name,,,,,,,"PCDS: Provide the name of an individual or their job title. As personnel turnover may render the contact's name obsolete, it is prefereable to provide a job title for ensuring accuracy of information and institutional memory. If the information is unknown or cannot be provided, leave blank or provide a null value.",,,,,,,,,,,,,,PCDS: Enterics Lab Manager,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,isolated_by_contact_name|isolated by contact name,isolated by contact name slot,,,,GENEPIO:0100463,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,isolated by contact name,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the name or title of the contact responsible for follow-up regarding the isolate.,,PCDS: The name or title of the contact responsible for follow-up regarding the isolate.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000050,MLST sequence typing,,"Multilocus sequence typing (MLST) is a technique in molecular biology for the typing of multiple loci. The procedure characterizes isolates of microbial species using the DNA sequences of internal fragments of multiple housekeeping genes. For each housekeeping gene, the different sequences present within a bacterial species are assigned as distinct alleles and, for each isolate, the alleles at each of the loci define the allelic profile or sequence type (ST).",FALSE,,,,,,,,,,,,,,,,,,,,,http://en.wikipedia.org/wiki/Multilocus_sequence_typing,,,,,,,pick list?,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000050,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,,,,,,,MLST sequence typing,,,,,Lab Analytic,,,,,,,,,,,,,,,,,,,,,,MLST Sequence Type,,,inferred from BCCDC interviews and Bionumerics,,"Multilocus sequence typing (MLST) is a technique in molecular biology for the typing of multiple loci. The procedure characterizes isolates of microbial species using the DNA sequences of internal fragments of multiple housekeeping genes. For each housekeeping gene, the different sequences present within a bacterial species are assigned as distinct alleles and, for each isolate, the alleles at each of the loci define the allelic profile or sequence type (ST).",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100771,wastewater system type,wastewater system type,A data field which describes the type or classification of a wastewater system.,FALSE,,,,,,,PCDS:wastewater_system_type,,,,,,,PCDS: Provide the classification of the wastewater system by selecting from the provided pick list.,,,,,,,,,,,,,,PCDS: Sanitary sewer,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,wastewater system type,wastewater system type slot,,,,GENEPIO:0100771,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-21T01:14:47.111Z,,,,,,,,,,,,,,,,,,,wastewater system type,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the type or classification of a wastewater system.,,PCDS: The type or classification of a wastewater system.,,,,,,
http://purl.obolibrary.org/obo/FOODON_03500054,latex surface,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=N0054,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03500054,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,latex surface,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0101715,genome sequence filename,genome sequence file name,"PCDS: Provide the name and version number, with the file extension, of the processed genome sequence file e.g. a consensus sequence FASTA file or a genome assembly file.",FALSE,,,,,,,PCDS:genome_sequence_filename,,,,,,,"PCDS: Provide the name and version number, with the file extension, of the processed genome sequence file e.g. a consensus sequence FASTA file or a genome assembly file.",,,,,,,,,,,,,,PCDS: mevassembly.fasta,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,genome sequence file name,,,,GENEPIO:0101715,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788,2026-04-13T17:18:02.461Z,,,,,,,,,,,,,,,,,,,genome sequence filename,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PCDS: The name of the sequence file.,,,,,,
http://purl.obolibrary.org/obo/NCIT_C12964,Connective and Soft Tissue,Connective and Soft Tissue,The supporting connective tissue of an organ.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Connective and Soft Tissue,,,,NCIT:C12964,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Connective and Soft Tissue,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The supporting connective tissue of an organ.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03460107,lactic acid-other agent fermentation,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=H0107,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03460107,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lactic acid-other agent fermentation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HP_0003593,Infantile onset,Onset in infancy|Onset in first year of life|Infantile onset,Onset of signs or symptoms of disease between 28 days to one year of life.,FALSE,,,,,,,,,,,,,,Onset of signs or symptoms of disease within the first 12 months of life.,,,,,,,,,,,,,,,,,,UMLS:C1848924,,,,,,,,,,,,,,,,,,,,,,,HP:0010573|HP:0003672|HP:0003667|HP:0003631|HP:0003629|HP:0003600|HP:0003599|HP:0003594|HP:0003591|HP:0003579|HP:0003576,,Onset in infancy|Onset in first year of life|Infantile onset,,,,HP:0003593,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,Infantile onset,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Onset of signs or symptoms of disease between 28 days to one year of life.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001629,obsolete: sample body source,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000227,,,,,,,,,,,,,,,,,,,GENEPIO:0001629,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: sample body source,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0000025,,,,,,,,,,,
http://purl.obolibrary.org/obo/UO_0010066,kilometer,km|kilometre,A length unit which is equal to one thousand meters.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,km|kilometre,,,,UO:0010066,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,kilometer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A length unit which is equal to one thousand meters.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0010068,microgram per deciliter,ug/dl|microgram per decilitre,A mass unit density which is equal to mass of an object in micrograms divided by the volume in deciliters.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ug/dl|microgram per decilitre,,,,UO:0010068,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,microgram per deciliter,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A mass unit density which is equal to mass of an object in micrograms divided by the volume in deciliters.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0010067,milligram per deciliter,milligram per decilitre|mg/dl,A mass unit density which is equal to mass of an object in milligrams divided by the volume in deciliters.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,milligram per decilitre|mg/dl,,,,UO:0010067,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,milligram per deciliter,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A mass unit density which is equal to mass of an object in milligrams divided by the volume in deciliters.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_88225,beta-lactam antibiotic allergen,,Any β-lactam antibiotic which causes the onset of an allergic reaction.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:88225,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,beta-lactam antibiotic allergen,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any β-lactam antibiotic which causes the onset of an allergic reaction.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100863,midnight-v1 strategy,,An amplicon strategy which targets SARS-CoV-2 and was developed by Oxford Nanopore Technologies with the attributes of version 1.0.0 which produces amplicons approximately 1200bp in length.,FALSE,,,,,,,midnight-v1|midnight v1,,,,,,,,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100863,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2026-04-13T19:52:38.515Z,,,,,,,,,,,,,,,,,,,midnight-v1 strategy,,,,,,,,,,,,,,,,,,,,,,https://www.protocols.io/view/ncov-2019-sequencing-protocol-rapid-barcoding-1200-rm7vz8q64vx1/v1,,,,,,,,,,An amplicon strategy which targets SARS-CoV-2 and was developed by Oxford Nanopore Technologies with the attributes of version 1.0.0 which produces amplicons approximately 1200bp in length.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0060530,snail allergy,,A mollusc allergy triggered by snails.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0060530,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,snail allergy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A mollusc allergy triggered by snails.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0060531,horned turban snail allergy,,A snail allergy triggered by the horned turban snail.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0060531,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,horned turban snail allergy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A snail allergy triggered by the horned turban snail.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001785,specimen collection location - city,,The city where a specimen was collected (taken) from a subject or environment,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001785,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,specimen collection location - city,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/NCIT_C80234,,,,Damion Dooley,,,,The city where a specimen was collected (taken) from a subject or environment,,,,,,,,
http://purl.obolibrary.org/obo/HP_0033994,Dependency on parenteral nutrition,,Inability to ingest sufficient quantities of nutrition by mouth or by tube-feeding with the corresponding requirement for intravenous administration of nutrition.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0033994,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Dependency on parenteral nutrition,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Inability to ingest sufficient quantities of nutrition by mouth or by tube-feeding with the corresponding requirement for intravenous administration of nutrition.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100070,pharyngeal exudate,,Fluid exuded from the pharynx posterior wall.,FALSE,,,,,,,Pharyngeal exudate,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100070,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,pharyngeal exudate,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Fluid exuded from the pharynx posterior wall.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100043,HRCE cell line,human renal cortical epithelial cell line,Normal human primary renal cortical epithelial cells.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,human renal cortical epithelial cell line,,,,GENEPIO:0100043,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,HRCE cell line,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Normal human primary renal cortical epithelial cells.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000126,draft pathogenic epi case food record,,A description of a food item that a case patient has come in contact with.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000126,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,draft pathogenic epi case food record,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A description of a food item that a case patient has come in contact with.,,,,,,,,
http://purl.obolibrary.org/obo/NBO_0015005,smoking behavior,,Consumption behavior that involves burning a substance and inhaling the particulate and gas suspension emitted.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NBO:0015005,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/nbo.owl,,,,,,,,,smoking behavior,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Consumption behavior that involves burning a substance and inhaling the particulate and gas suspension emitted.,,,,,,,,
http://purl.bioontology.org/ontology/MESH/D058751,livestock,,Domesticated farm animals raised for home use or profit but excluding POULTRY. Typically livestock includes CATTLE; SHEEP; HORSES; SWINE; GOATS; and others.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,D058751,,,,,,,,,,,,,,,,,,,,,,,,http://purl.bioontology.org/ontology/MESH,,,,,,,,,livestock,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Domesticated farm animals raised for home use or profit but excluding POULTRY. Typically livestock includes CATTLE; SHEEP; HORSES; SWINE; GOATS; and others.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_50695,monobactam,,"Monocyclic, bacterially produced or semisynthetic beta-lactam antibiotic. It lacks the double ring construction of the traditional beta-lactam antibiotics and can be easily synthesized.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:50695,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,monobactam,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Monocyclic, bacterially produced or semisynthetic beta-lactam antibiotic. It lacks the double ring construction of the traditional beta-lactam antibiotics and can be easily synthesized.",,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000417,house,,A house is a building that provides a dwelling-place for a living entity.,FALSE,,,,,,,,,,,,,,The provisioning of a dwelling-place can perhaps be modelled as a role.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01000417,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,house,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A house is a building that provides a dwelling-place for a living entity.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002084,draft sequence repository data - isolate,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002084,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,draft sequence repository data - isolate,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"order:
GENEPIO:0001640 # specimen taxonomy
GENEPIO:0001429 # strain identifier
GENEPIO:0001644 # isolate identifier
OBI:0000079 # culture medium
GENEPIO:0002107 # isolation medium",,,,,
http://purl.obolibrary.org/obo/NCIT_C70810,Date of Death,deathDate|Death Date|Date of Death (If Deceased)|Date of Death|DOD,The calendar date of subject's death.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,deathDate|Death Date|Date of Death (If Deceased)|Date of Death|DOD,,,,NCIT:C70810,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Date of Death,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,The calendar date of subject's death.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0001386,Joint swelling,Joint swelling,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0152031|SNOMEDCT_US:271771009,,,,,,,,,,,,,,,,,,,,,,,,,Joint swelling,,,,HP:0001386,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Joint swelling,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HP_0001387,Joint stiffness,Stiff joints|Stiff joint|Joint stiffness,Joint stiffness is a perceived sensation of tightness in a joint or joints when attempting to move them after a period of inactivity. Joint stiffness typically subsides over time.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0162298|SNOMEDCT_US:84445001,,,,,,,,,,,,,,,,,,,,,,,HP:0003033|HP:0002775,,Stiff joints|Stiff joint|Joint stiffness,,,,HP:0001387,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Joint stiffness,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Joint stiffness is a perceived sensation of tightness in a joint or joints when attempting to move them after a period of inactivity. Joint stiffness typically subsides over time.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_18059,lipid,,"'Lipids' is a loosely defined term for substances of biological origin that are soluble in nonpolar solvents. They consist of saponifiable lipids, such as glycerides (fats and oils) and phospholipids, as well as nonsaponifiable lipids, principally steroids.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:6486|CHEBI:25054|CHEBI:14517,,,,,,CHEBI:18059,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,lipid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"'Lipids' is a loosely defined term for substances of biological origin that are soluble in nonpolar solvents. They consist of saponifiable lipids, such as glycerides (fats and oils) and phospholipids, as well as nonsaponifiable lipids, principally steroids.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000363,veal foreshank (raw),,A raw veal foreshank cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000363,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,veal foreshank (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw veal foreshank cut.,,,,,,,,
http://purl.obolibrary.org/obo/GO_0006810,transport,,"The directed movement of substances (such as macromolecules, small molecules, ions) or cellular components (such as complexes and organelles) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or a transporter complex, a pore or a motor protein.",FALSE,,,,,,,,,,,,,,"Note that this term should not be used for direct annotation. It should be possible to make a more specific annotation to one of the children of this term, for e.g. to transmembrane transport, to microtubule-based transport or to vesicle-mediated transport.",,,,,,,,,,,,,,,,,,Reactome:R-HSA-382551,,,,,,,,,,,,,,,,,,,,,,,GO:0044765|GO:0015460|GO:0015457,,,,,,GO:0006810,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/go.owl,http://purl.oboInOwllibrary.org/oboInOwl/go#goslim_prokaryote_ribbon|http://purl.oboInOwllibrary.org/oboInOwl/go#goslim_prokaryote|http://purl.oboInOwllibrary.org/oboInOwl/go#goslim_plant_ribbon|http://purl.oboInOwllibrary.org/oboInOwl/go#goslim_plant|http://purl.oboInOwllibrary.org/oboInOwl/go#goslim_pir|http://purl.oboInOwllibrary.org/oboInOwl/go#goslim_metagenomics|http://purl.oboInOwllibrary.org/oboInOwl/go#goslim_chembl|http://purl.oboInOwllibrary.org/oboInOwl/go#goslim_candida|http://purl.oboInOwllibrary.org/oboInOwl/go#gocheck_do_not_annotate,,,,,,,,transport,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The directed movement of substances (such as macromolecules, small molecules, ions) or cellular components (such as complexes and organelles) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or a transporter complex, a pore or a motor protein.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_4877,ethambutol,,"An ethylenediamine derivative that is ethane-1,2-diamine in which one hydrogen attached to each of the nitrogens is sutstituted by a 1-hydroxybutan-2-yl group (<i>S</i>,<i>S</i>-configuration). It is a bacteriostatic antimycobacterial drug, effective against <em>Mycobacterium tuberculosis</em> and some other mycobacteria. It is used (as the dihydrochloride salt) in combination with other antituberculous drugs in the treatment of pulmonary and extrapulmonary tuberculosis; resistant strains of <em>M. tuberculosis</em> are readily produced if ethambutol is used alone.",FALSE,,,,,,,Emb|ETB|E,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:678172|CHEBI:659237|CHEBI:133410,,,,,,CHEBI:4877,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,ethambutol,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An ethylenediamine derivative that is ethane-1,2-diamine in which one hydrogen attached to each of the nitrogens is sutstituted by a 1-hydroxybutan-2-yl group (<i>S</i>,<i>S</i>-configuration). It is a bacteriostatic antimycobacterial drug, effective against <em>Mycobacterium tuberculosis</em> and some other mycobacteria. It is used (as the dihydrochloride salt) in combination with other antituberculous drugs in the treatment of pulmonary and extrapulmonary tuberculosis; resistant strains of <em>M. tuberculosis</em> are readily produced if ethambutol is used alone.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_38304,diazolidine,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:38304,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,diazolidine,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510125,tooth decay-related claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0125,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510125,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,tooth decay-related claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://www.ebi.ac.uk/efo/EFO_0004302,anthropometric measurement,anthropometry|anthropometric traits,"Anthropometry is a measurement of the size, weight, and proportions of the human or other primate body.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MESH:D000886,,,,,,,,,,,,,,,,,,,,,,,,,anthropometry|anthropometric traits,,,,efo:EFO_0004302,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,anthropometric measurement,,,,,,,,,,,,,,,,,,,,,,,,,,,,Dani Welter,,,,"Anthropometry is a measurement of the size, weight, and proportions of the human or other primate body.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C15384,Surgical Incision,incision|Surgical Incision|Otomy|Incisional|Incision,An intentional cut made to an individual's body with the intent of performing a diagnostic or therapeutic intervention.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,incision|Surgical Incision|Otomy|Incisional|Incision,,,,NCIT:C15384,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Surgical Incision,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An intentional cut made to an individual's body with the intent of performing a diagnostic or therapeutic intervention.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100253,volunteer role,,A role inhering in a person that is realized when the bearer enters into any service of their own free will.,FALSE,,,,,,,Volunteer,,,,,,,,,,,,,,https://en.wiktionary.org/wiki/visitor,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100253,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,volunteer role,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A role inhering in a person that is realized when the bearer enters into any service of their own free will.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0002398,manus,forepaw|forefoot of quadruped|forefoot|forefeet|fore-paw|fore paw|fore foot,"Distal segment of the fore limb, including carpal region, metacarpal region and digits.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:Hand|Wikipedia:Manus_(anatomy)|VHOG:0000344|UMLS:C0018563|SCTID:302539009|NLXANAT:20090603|NCIT:C32712|MESH:D006225|MA:0000037|GAID:56|FMA:9712|EMAPA:17428|EHDAA2:0000728|CALOHA:TS-2213|BTO:0004668|AAO:0010803,,,,,,,,,,,,,,,,,,,,,,,,,terminal segment of free upper limb|hand region|hand|forelimb autopodium|forelimb autopod,forepaw|forefoot of quadruped|forefoot|forefeet|fore-paw|fore paw|fore foot,,,UBERON:0002398,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,manus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Distal segment of the fore limb, including carpal region, metacarpal region and digits.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0002399,lesser omentum,,"The double layer of peritoneum that extends from the liver to the lesser curvature of the stomach and the start of the duodenum. [WP,unvetted].",FALSE,,,,,,,,,,,,,,EDITOR_NOTE exact part of and develops from relationships need to be established,,,,,,,,,,,,,,,,,,Wikipedia:Lesser_omentum|VHOG:0000357|UMLS:C0230260|SCTID:362712005|NCIT:C32981|MA:0001623|FMA:9715|EV:0100086|EMAPA:17890|EHDAA:4858|EHDAA2:0000991,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0002399,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,lesser omentum,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The double layer of peritoneum that extends from the liver to the lesser curvature of the stomach and the start of the duodenum. [WP,unvetted].",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0002391,lymph,,Lymph is the fluid that is formed when interstitial fluid enters the conduits of the lymphatic system through lymph capillaries[WP].,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:Lymph|ZFA:0005658|Wikipedia:Lymph|VHOG:0001590|UMLS:C0024202|NCIT:C13252|MIAA:0000055|MESH:D008196|MAT:0000055|MA:0002520|GAID:1186|FMA:9671|EV:0100049|ENVO:02000041|EFO:0000871|CALOHA:TS-0580|BTO:0000855,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0002391,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,lymph,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Lymph is the fluid that is formed when interstitial fluid enters the conduits of the lymphatic system through lymph capillaries[WP].,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001872,removed date,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001872,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,removed date,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001562,reference genome identifier,,Identifier for a reference genome (used to build or compare an assembly)  that is used in the genome browsers and in the community,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001562,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,http://purl.obolibrary.org/obo/SO_0001505,,,,,,reference genome identifier,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,Identifier for a reference genome (used to build or compare an assembly)  that is used in the genome browsers and in the community,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490355,paper-plastic combination,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0355,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490355,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,paper-plastic combination,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0003103,compound organ,,Anatomical structure that has as its parts two or more multi-tissue structures of at least two different types and which through specific morphogenetic processes forms a single distinct structural unit demarcated by bona fide boundaries from other distinct anatomical structures of different types.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ZFA:0000496|XAO:0003041|VHOG:0001723|TGMA:0001837|TAO:0000496|TADS:0000598|HAO:0000024|EHDAA2:0003024|CARO:0000024|BILA:0000024|AEO:0000024|AAO:0010015,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0003103,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,compound organ,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Anatomical structure that has as its parts two or more multi-tissue structures of at least two different types and which through specific morphogenetic processes forms a single distinct structural unit demarcated by bona fide boundaries from other distinct anatomical structures of different types.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0003102,surface structure,anatomical surface feature,Anatomical structure that overlaps the outer epithelial layer and is adjacent to the space surrounding the organism.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:SurfaceRegion|ZFA:0000292|XAO:0003028|Wikipedia:Surface_structure|VSAO:0000001|TAO:0000292|EHDAA2_RETIRED:0003010|AEO_RETIRED:0000010|AAO:0010337,,,,,,,,,,,,,,,,,,,,,,,,,anatomical surface feature,,,,UBERON:0003102,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,surface structure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Anatomical structure that overlaps the outer epithelial layer and is adjacent to the space surrounding the organism.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000565,sports facility,,A building or region where sports activities can be carried out.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00000565,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,sports facility,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A building or region where sports activities can be carried out.,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_28901,Salmonella enterica,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,Salmonella enterica,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:28901,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Salmonella enterica,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001056,obsolete: pet treat,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,"Duplicate term, replaced by more appropriate FOODON term FOODON:00003357 'pet treat'.",,,,,,,,,,,,,,,,,,,GENEPIO:0001056,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: pet treat,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,http://purl.obolibrary.org/obo/FOODON_00003357,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020016,"animal breast (skinless, raw)",,A raw skinless animal breast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020016,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"animal breast (skinless, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw skinless animal breast.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000130,rocky reef,submerged reef|shore reef|fringing reef|barrier reef|bank reef|atoll reef,"A ridge of rocks, lying near the surface of the sea, which may be visible at low tide, but is usually covered by water.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Reef|TGN:21479|SPIRE:Reef|Geonames:U.RFU|Geonames:U.RFSU|Geonames:H.RF|FTT:729|FTT:203|FTT:202|EcoLexicon:reef,,,,,,,,,,,,,,,,,,,,,,,,,REEF,submerged reef|shore reef|fringing reef|barrier reef|bank reef|atoll reef,,,ENVO:00000130,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,rocky reef,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A ridge of rocks, lying near the surface of the sea, which may be visible at low tide, but is usually covered by water.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03450039,food reheating by dry heat,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=G0039,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03450039,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food reheating by dry heat,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/IDO_0000547,virulence factor,,A biological macromolecule produced by a pathogen and that has a virulence factor disposition.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,IDO:0000547,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ido.owl,,,,,,,,,virulence factor,,,,,,,,,,,,,,,,,,,,,,,,,,,,Lindsay Cowell|Alexander Diehl|Albert Goldfain,,,,A biological macromolecule produced by a pathogen and that has a virulence factor disposition.,,,,,,,,
http://purl.obolibrary.org/obo/IDO_0000538,pathogen host,,An organism bearing a pathogen host role.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,IDO:0000538,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ido.owl,,,,,,,,,pathogen host,,,,,,,,,,,,,,,,,,,,,,,,,,,,Lindsay Cowell|Alexander Diehl|Albert Goldfain,,,,An organism bearing a pathogen host role.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C68615,Birth Date,birthDate|Date of Birth|DOB|Birth Date|BRTHDAT|BD,The calendar date on which a person was born.,FALSE,,,,,http://purl.obolibrary.org/obo/GENEPIO_0001225,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,birthDate|Date of Birth|DOB|Birth Date|BRTHDAT|BD,,,,NCIT:C68615,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Birth Date,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,The calendar date on which a person was born.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C12471,Soft Tissue,soft tissue|Soft Tissue|SOFT TISSUE,"A general term comprising tissue that is not hardened or calcified; including muscle, fat, blood vessels, nerves, tendons, ligaments and fascia.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,soft tissue|Soft Tissue|SOFT TISSUE,,,,NCIT:C12471,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Soft Tissue,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A general term comprising tissue that is not hardened or calcified; including muscle, fat, blood vessels, nerves, tendons, ligaments and fascia.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03460128,multi-component food fermentation,,"A food fermentation process in which significant amounts of two or more components (i.e. carbohydrate and protein, carbohydrate and fat, protein and fat, or all three) are modified through microbial processes. Enzymatic or other biological processes may also be involved.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=H0128,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03460128,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,multi-component food fermentation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A food fermentation process in which significant amounts of two or more components (i.e. carbohydrate and protein, carbohydrate and fat, protein and fat, or all three) are modified through microbial processes. Enzymatic or other biological processes may also be involved.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C28193,Syndrome,syndrome|Syndrome,"A group of signs, symptoms, and clinicopathological characteristics that may or may not have a genetic basis and collectively define an abnormal condition.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,syndrome|Syndrome,,,,NCIT:C28193,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Syndrome,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A group of signs, symptoms, and clinicopathological characteristics that may or may not have a genetic basis and collectively define an abnormal condition.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000024,isolate upload date,,A date which describes when the isolate was entered into the database.,FALSE,,,,,,,,,,,,,,,,,,,,,NML LIMS,,,,,,,month/day/year,,,,PulseNet: UploadDate,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000024,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,,,,,,,isolate upload date,,,,,Collection,,,,,,,,,,,,,,,,,,,,,,Upload date,,,NML Labware LIMS,,A date which describes when the isolate was entered into the database.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0705,Burusho in Pakistan (HGDP),Burusho,A population made up of 22 samples from Burusho individuals recruited in Pakistan as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Central South Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Burusho,,,,HANCESTRO:0705,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Burusho in Pakistan (HGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 22 samples from Burusho individuals recruited in Pakistan as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Central South Asian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0708,Makrani in Pakistan (HGDP),Makrani,A population made up of 23 samples from Makrani individuals recruited in Pakistan as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Central South Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Makrani,,,,HANCESTRO:0708,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Makrani in Pakistan (HGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 23 samples from Makrani individuals recruited in Pakistan as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Central South Asian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0700,Tubalar in Russia (SGDP),Tubalar,A population made up of 2 samples from Tubalar individuals recruited in Russia as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Central Asian and Siberian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Tubalar,,,,HANCESTRO:0700,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Tubalar in Russia (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Tubalar individuals recruited in Russia as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Central Asian and Siberian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0702,Yakut in Russia (SGDP),Yakut,A population made up of 2 samples from Yakut individuals recruited in Russia as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Central Asian and Siberian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Yakut,,,,HANCESTRO:0702,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Yakut in Russia (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Yakut individuals recruited in Russia as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Central Asian and Siberian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0709,Pathan in Pakistan (HGDP),Pathan,A population made up of 23 samples from Pathan individuals recruited in Pakistan as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Central South Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Pathan,,,,HANCESTRO:0709,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Pathan in Pakistan (HGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 23 samples from Pathan individuals recruited in Pakistan as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Central South Asian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0704,Brahui in Pakistan (HGDP),Brahui,A population made up of 23 samples from Brahui individuals recruited in Pakistan as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Central South Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Brahui,,,,HANCESTRO:0704,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Brahui in Pakistan (HGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 23 samples from Brahui individuals recruited in Pakistan as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Central South Asian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0707,Kalash in Pakistan (HGDP),Kalash,A population made up of 21 samples from Kalash individuals recruited in Pakistan as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Central South Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Kalash,,,,HANCESTRO:0707,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Kalash in Pakistan (HGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 21 samples from Kalash individuals recruited in Pakistan as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Central South Asian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0706,Hazara in Pakistan (HGDP),Hazara,A population made up of 18 samples from Hazara individuals recruited in Pakistan as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Central South Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Hazara,,,,HANCESTRO:0706,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Hazara in Pakistan (HGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 18 samples from Hazara individuals recruited in Pakistan as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Central South Asian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0703,Balochi in Pakistan (HGDP),Balochi,A population made up of 22 samples from Balochi individuals recruited in Pakistan as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Central South Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Balochi,,,,HANCESTRO:0703,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Balochi in Pakistan (HGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 22 samples from Balochi individuals recruited in Pakistan as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Central South Asian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0701,Ulchi in Russia (SGDP),Ulchi,A population made up of 2 samples from Ulchi individuals recruited in Russia as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Central Asian and Siberian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Ulchi,,,,HANCESTRO:0701,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Ulchi in Russia (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Ulchi individuals recruited in Russia as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Central Asian and Siberian.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00000641,Province (Algeria),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00000641,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Province (Algeria),http://purl.obolibrary.org/obo/GAZ_00000563,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020698,piece of poultry meat (with bone),,A piece of poultry meat that contains bone material.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020698,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of poultry meat (with bone),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A piece of poultry meat that contains bone material.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100417,recreational event datum,,A mass gathering event where the primary emphasis is on recreation.,FALSE,,,,,,,Recreational Event,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100417,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-01-23T00:42:19.315Z,,,,,,,,,,,,,,,,,,,recreational event datum,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A mass gathering event where the primary emphasis is on recreation.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510153,very low sodium claim,,Food having 35 milligrams or less sodium per amount customarily consumed (and per 50 grams of food if the amount customarily consumed is small). Meals and main dishes contain 35 milligrams or less sodium per 100 grams food.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0153,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510153,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,very low sodium claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Food having 35 milligrams or less sodium per amount customarily consumed (and per 50 grams of food if the amount customarily consumed is small). Meals and main dishes contain 35 milligrams or less sodium per 100 grams food.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_35341,steroid,,"Any of naturally occurring compounds and synthetic analogues, based on the cyclopenta[<em>a</em>]phenanthrene carbon skeleton, partially or completely hydrogenated; there are usually methyl groups at C-10 and C-13, and often an alkyl group at C-17. By extension, one or more bond scissions, ring expansions and/or ring contractions of the skeleton may have occurred. Natural steroids are derived biogenetically from squalene which is a triterpene.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:9263|CHEBI:26768|CHEBI:13687,,,,,,CHEBI:35341,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,steroid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Any of naturally occurring compounds and synthetic analogues, based on the cyclopenta[<em>a</em>]phenanthrene carbon skeleton, partially or completely hydrogenated; there are usually methyl groups at C-10 and C-13, and often an alkyl group at C-17. By extension, one or more bond scissions, ring expansions and/or ring contractions of the skeleton may have occurred. Natural steroids are derived biogenetically from squalene which is a triterpene.",,,,,,,,
http://purl.obolibrary.org/obo/OMIT_0012122,population density,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OMIT:0012122,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/omit,,,,,,,,,population density,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0004529,anatomical projection,shelves|shelf|ridges|ridge|projections|projection|processes|process of organ|papilla|organ process|laminae|lamina|lamellae|lamella|flanges|flange,A projection or outgrowth of tissue from a larger body or organ.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:Ridge|XAO:0004020|Wikipedia:Process_(anatomy)|VSAO:0000180|TAO:0001834|NCIT:C61549|HAO:0000822|FMA:67601|AAO:0010278,,,,,,,,,,,,,,,,,,,,,,,,process|anatomical process,projection|processus,shelves|shelf|ridges|ridge|projections|projection|processes|process of organ|papilla|organ process|laminae|lamina|lamellae|lamella|flanges|flange,,,UBERON:0004529,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,anatomical projection,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A projection or outgrowth of tissue from a larger body or organ.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00009573,District (Palestinian Territories),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00009573,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,District (Palestinian Territories),http://purl.obolibrary.org/obo/GAZ_00002475,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00009572,West Bank,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,INSDC:country:west bank,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00009572,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,West Bank,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00009571,Gaza Strip,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,INSDC:country:gaza strip,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00009571,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Gaza Strip,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0001898,comment on investigation,,A textual entity that is about any of the aspects of an investigation worth noting,FALSE,,,,,,,,,,,,,,,,,,,,,NIAID GSCID-BRC metadata working group,,,,,comment on investigation,,,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0001898,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,comment on investigation,,,,,,,Comments,,,,,,,,,,,,,,,,,,,,,"PERSON: Chris Stoeckert, Jie Zheng",,,,A textual entity that is about any of the aspects of an investigation worth noting,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03450012,cooking by moist heat,,"Cooking in varying amounts of water, water-based liquid or steam.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=G0012,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03450012,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,cooking by moist heat,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Cooking in varying amounts of water, water-based liquid or steam.",,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000240,Sena,,The Sena are a Bantu Eastern population with a population size of 2 million.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000240,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Sena,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The Sena are a Bantu Eastern population with a population size of 2 million.,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000243,Nyakyusa,,A Bantu Eastern population with a population size of 1.050 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000243,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Nyakyusa,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Bantu Eastern population with a population size of 1.050 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000245,Antankarana,,A Malagasy population with a population size of 0.05 million,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000245,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Antankarana,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Malagasy population with a population size of 0.05 million,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000241,Bongo,,A Sudanic population with a population size of Nilo-Saharan|Satellite-Core|Satellites|Central Sudanic|West|Bongo-Bagirmi|Bongo-Baka|Bongo|Kacipo-Balesi|Tennet|Luo|Lango-Acholi,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000241,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Bongo,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Sudanic population with a population size of Nilo-Saharan|Satellite-Core|Satellites|Central Sudanic|West|Bongo-Bagirmi|Bongo-Baka|Bongo|Kacipo-Balesi|Tennet|Luo|Lango-Acholi,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000248,Sakalava,,The Sakalava are a Malagasy population with a population size of 1.2 million.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000248,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Sakalava,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The Sakalava are a Malagasy population with a population size of 1.2 million.,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000249,Betsimisaraka,,A Malagasy population with a population size of 1.5 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000249,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Betsimisaraka,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Malagasy population with a population size of 1.5 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000242,Chipeta,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000242,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Chipeta,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000244,Burunge,,A Cushitic Eastern population with a population size of 0.030 million,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000244,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Burunge,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Cushitic Eastern population with a population size of 0.030 million,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000247,Tsimihety,,The Tsimihety are a Malagasy population with a population size of 1.2 million.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000247,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Tsimihety,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The Tsimihety are a Malagasy population with a population size of 1.2 million.,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0005020,intestinal disorder,intestine disease or disorder|intestine disease|intestinal disorder|intestinal disease|disorder of intestine|disease or disorder of intestine|disease of intestine,A non-neoplastic or neoplastic disorder that affects the small or large intestine.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0021831|SCTID:85919009|NCIT:C26801|MESH:D007410|MEDGEN:7130|ICD9:575|ICD9:570-579|ICD9:569.9|ICD9:569.89|ICD9:569.49|ICD9:569.4|ICD9:569|ICD9:564.4|ICD9:564|ICD9:560-569|ICD9:520-579|EFO:0009431|DOID:5295,,,,,,,,,,,,,,,,,,,,,,,,,intestine disease or disorder|intestine disease|intestinal disorder|intestinal disease|disorder of intestine|disease or disorder of intestine|disease of intestine,,,,MONDO:0005020,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#rare_grouping|http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,intestinal disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A non-neoplastic or neoplastic disorder that affects the small or large intestine.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0004120,mesoderm-derived structure,mesodermal derivative,An anatomical structure that develops (entirely or partially) from the mesoderm.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,mesodermal derivative,,,,UBERON:0004120,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,mesoderm-derived structure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An anatomical structure that develops (entirely or partially) from the mesoderm.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0004121,ectoderm-derived structure,ectodermal deriviative,An anatomical structure that develops (entirely or partially) from the ectoderm.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ectodermal deriviative,,,,UBERON:0004121,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,ectoderm-derived structure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An anatomical structure that develops (entirely or partially) from the ectoderm.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510095,vitamin- or mineral-related claim,,A claim about a vitamin or mineral with respect to an edible product.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0095,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510095,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,vitamin- or mineral-related claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A claim about a vitamin or mineral with respect to an edible product.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_104,bacterial infectious disease,,"A disease by infectious agent that results_in infection, has_material_basis_in Bacteria.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:104,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,bacterial infectious disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A disease by infectious agent that results_in infection, has_material_basis_in Bacteria.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_106,pleural tuberculosis,,"An extrapulmonary tuberculosis that results_in lymphocyte-predominant exudative pleural effusion, located_in pleura. This results from an allergic response to tuberculoprotein causing the permeabiltity of the pleural vasculature to alter leading to a sub-pleural caseous focus rupture into the pleural sac.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:106,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,pleural tuberculosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An extrapulmonary tuberculosis that results_in lymphocyte-predominant exudative pleural effusion, located_in pleura. This results from an allergic response to tuberculoprotein causing the permeabiltity of the pleural vasculature to alter leading to a sub-pleural caseous focus rupture into the pleural sac.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000183,beef outside skirt steak,,"A beef steak that is a trimmed, boneless portion of the diaphragm muscle attached to the 6th through 12th rib on the underside of the short plate.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000183,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef outside skirt steak,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A beef steak that is a trimmed, boneless portion of the diaphragm muscle attached to the 6th through 12th rib on the underside of the short plate.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C114870,Post-Natal Death at 16-20 Weeks Gestation,Post-Natal Death at 16-20 Weeks Gestation,A fetus of 16-20 weeks gestational age that shows signs of life at birth but dies after delivery.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Post-Natal Death at 16-20 Weeks Gestation,,,,NCIT:C114870,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Post-Natal Death at 16-20 Weeks Gestation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A fetus of 16-20 weeks gestational age that shows signs of life at birth but dies after delivery.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03308407,fish fillet (in tomato sauce),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://bioregistry.io/reference/siren:F8407,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03308407,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,fish fillet (in tomato sauce),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100728,colony count microbiological quantification tag,colony count data type,A microbiological quantification data tag which indicates the presence of colony count data.,FALSE,,,,,,,colony count,,,,,,,Example Guidance: Use this tag to indicate additional data is available that provides quantification information from microbial colony counts.,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,colony count data type,,,,GENEPIO:0100728,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-5275-8866,2023-05-18T19:08:34.869Z,,,,,,,,,,,,,,,,,,,colony count microbiological quantification tag,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A microbiological quantification data tag which indicates the presence of colony count data.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C40974,First Name,pi_first_name|pi first name|Person Given Name|Given Name|Forename|First Name,A word or group of words indicating a person's first (personal or given) name; the name that precedes the surname.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,pi_first_name|pi first name|Person Given Name|Given Name|Forename|First Name,,,,NCIT:C40974,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,First Name,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A word or group of words indicating a person's first (personal or given) name; the name that precedes the surname.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001907,spheroid,,"A spheroid, or ellipsoid of revolution, is a quadric surface obtained by rotating an ellipse about one of its principal axes; in other words, an ellipsoid with two equal semi-diameters.",FALSE,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Spheroid,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001907,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,spheroid,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"A spheroid, or ellipsoid of revolution, is a quadric surface obtained by rotating an ellipse about one of its principal axes; in other words, an ellipsoid with two equal semi-diameters.",,,,,,,,
http://purl.obolibrary.org/obo/HP_0000951,Abnormality of the skin,Dermopathy|Dermatopathy|Abnormality of the skin,An abnormality of the skin.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0037274|UMLS:C0037268|SNOMEDCT_US:95320005|SNOMEDCT_US:199879009,,,,,,,,,,,,,,,,,,,,,,,HP:0007580|HP:0007415|HP:0006736|HP:0005591|HP:0001479|HP:0001478,,Dermopathy|Dermatopathy|Abnormality of the skin,,,,HP:0000951,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,http://purl.oboInOwllibrary.org/oboInOwl/hp#hposlim_core,,,,,,,,Abnormality of the skin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An abnormality of the skin.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510233,"\""no trans fat\""claim",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0233,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510233,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"""no trans fat""claim",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_03501209,bedrail,side rail|safety rail|hospital bed rail|half rail|grab bar|bed side rail|bed rail|bed handle|assist bar|adult portable bed rail,"A poll which is attached to the head, foot, or side of a bed frame.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,side rail|safety rail|hospital bed rail|half rail|grab bar|bed side rail|bed rail|bed handle|assist bar|adult portable bed rail,,,,ENVO:03501209,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,bedrail,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A poll which is attached to the head, foot, or side of a bed frame.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490362,"nylon 6,6 container",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0362,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490362,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"nylon 6,6 container",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002056,obsolete: antimicrobial resistance testing platform vendor,,The manufacturer of an antibiotic resistance lab typing platform,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002056,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: antimicrobial resistance testing platform vendor,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,http://purl.obolibrary.org/obo/ARO_3004404,,,The manufacturer of an antibiotic resistance lab typing platform,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001599,transcript or protein expression objective,,Expression: assays of transcript or protein existence or abundance,FALSE,,,,,,,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/books/NBK54364/,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001599,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,transcript or protein expression objective,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,Expression: assays of transcript or protein existence or abundance,,,,expression,,,,
http://purl.obolibrary.org/obo/UBERON_0003978,valve,anatomical valve,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:Valve|FMA:67611|EHDAA:4406|EHDAA:1892|EHDAA2:0004046,,,,,,,,,,,,,,,,,,,,,,,,,anatomical valve,,,,UBERON:0003978,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,valve,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0003973,nasal concha of ethmoid bone,turbinate of ethmoid bone|nasal turbinate of ethmoid bone|ethmoturbinate|ethmoturbinal|ethmo-turbinate,"One of the conchae of the ethmoid bone, which occupy the caudal part of the nasal fossae and form the lateral and superior portions of the turbinate bones in mammals[MP]. The ethmoturbinals are associated with the cribiform plate. They are covered with olfactory epithelium. Primarily, they serve to increase the surface area over which olfactory receptor neurons can come in contact with respiratory air. These olfactory receptor nerves then synapse with the mitral cells of the olfactory lobes through the cribiform plate in the manner described above[Palaeos].",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:57456|EMAPA:37914,,,,,,,,,,,,,,,,,,,,,,,,,turbinate of ethmoid bone|nasal turbinate of ethmoid bone|ethmoturbinate|ethmoturbinal|ethmo-turbinate,,,,UBERON:0003973,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,nasal concha of ethmoid bone,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"One of the conchae of the ethmoid bone, which occupy the caudal part of the nasal fossae and form the lateral and superior portions of the turbinate bones in mammals[MP]. The ethmoturbinals are associated with the cribiform plate. They are covered with olfactory epithelium. Primarily, they serve to increase the surface area over which olfactory receptor neurons can come in contact with respiratory air. These olfactory receptor nerves then synapse with the mitral cells of the olfactory lobes through the cribiform plate in the manner described above[Palaeos].",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510249,source of omega-3 fatty acids,,"A claim that a food is a source of omega-3 fatty acids, and any claim likely to have the same meaning for the consumer, may only be made where the product contains at least 0,3 g alpha-linolenic acid per 100 g and per
100 kcal, or at least 40 mg of the sum of eicosapentaenoic acid and docosahexaenoic acid per 100 g and per 100 kcal [COMMISSION REGULATION (EU) No 116/2010 of 9 February 2010 amending Regulation (EC) No 1924/2006 of the European Parliament and of the Council with regard to the list of nutrition claims].",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0249,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510249,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,source of omega-3 fatty acids,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A claim that a food is a source of omega-3 fatty acids, and any claim likely to have the same meaning for the consumer, may only be made where the product contains at least 0,3 g alpha-linolenic acid per 100 g and per
100 kcal, or at least 40 mg of the sum of eicosapentaenoic acid and docosahexaenoic acid per 100 g and per 100 kcal [COMMISSION REGULATION (EU) No 116/2010 of 9 February 2010 amending Regulation (EC) No 1924/2006 of the European Parliament and of the Council with regard to the list of nutrition claims].",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001070,visiting relative/friends,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001070,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,visiting relative/friends,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100943,core sampling device,,"A grab sampler designed to extract a continuous, cylindrical section of material from a substrate preserving vertical structure and stratification.",FALSE,,,,,,,core sampler,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100943,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-11-20T16:24:25Z,,,,,,,,,,,,,,,,,,,core sampling device,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A grab sampler designed to extract a continuous, cylindrical section of material from a substrate preserving vertical structure and stratification.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03601067,farm-raised food product claim,,A domestic or cultivated food production in which plant or animal from which the food product derives was raised on a farm.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03601067,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,farm-raised food product claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A domestic or cultivated food production in which plant or animal from which the food product derives was raised on a farm.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C48470,Potency Unit,Unit of Potency|Potency Unit|POTENCY UNIT,The basic quantity or increment used to describe the strength of a product or amount of product in a package.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Unit of Potency|Potency Unit|POTENCY UNIT,,,,NCIT:C48470,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Potency Unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The basic quantity or increment used to describe the strength of a product or amount of product in a package.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0001173,service,,A planned process in which a service provider performs a task (i.e. a planned process) for a service consumer.,FALSE,,,,,,,,,,,,,,,,,,,,,OBI workshop San Diego 2011,,,,,service,,providing a training course for UCSD employees how to run a DNA sequencer; sequencing a DNA sample provided by a service consumer restricted to non-human samples; giving access to tissue samples in a biobank within OHSU; JAX shipping mice from their colony.,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,http://purl.obolibrary.org/obo/COB_0000035,,,,,,,,,,,,,,,,,OBI:0001173,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,service,,,,,,,,,,,,,,,,,,,,,,,,,,,,Carlo; Matt,,,,A planned process in which a service provider performs a task (i.e. a planned process) for a service consumer.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100924,extraction recovery efficiency measurement value,extraction recovery efficiency measurement value,"A data field which describes the recovery efficiency of an extraction, calculated as the amount of a synthetic or endogenous compound identified in the sample relative to the amount expected.",FALSE,,,,,,,PCDS:extraction_recovery_efficiency_measurement_value,,,,,,,PCDS: Provide value as a percent.,,,,,,,,,,,Drafted 2023-07-27,,,,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,extraction recovery efficiency measurement value,extraction recovery efficiency measurement value slot,,,,GENEPIO:0100924,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,extraction recovery efficiency measurement value,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A data field which describes the recovery efficiency of an extraction, calculated as the amount of a synthetic or endogenous compound identified in the sample relative to the amount expected.",,"PCDS: The recovery efficiency of an extraction, calculated as the amount of a synthetic or endogenous compound identified in the sample relative to the amount expected.",,,,,,
http://purl.obolibrary.org/obo/DOID_1579,respiratory system disease,,A disease of anatomical entity that located_in the respiratory system which extends from the nasal sinuses to the diaphragm.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:1579,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,respiratory system disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A disease of anatomical entity that located_in the respiratory system which extends from the nasal sinuses to the diaphragm.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_03501208,air vent,vent,A manufactured product consisting of a duct opening which allows air to circulate.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,vent,,,,,ENVO:03501208,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,air vent,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A manufactured product consisting of a duct opening which allows air to circulate.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470173,inert atmosphere storage process,,"Preservation by storage in inert gases (e.g. nitrogen) to suppress or inhibit undesirable micro-organism growth, oxidation activity, etc.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0173,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470173,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,inert atmosphere storage process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Preservation by storage in inert gases (e.g. nitrogen) to suppress or inhibit undesirable micro-organism growth, oxidation activity, etc.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_55429,cephamycin,,"Any member of the cephamycin sub-group of cephem antibiotics, differing from cephalosporins in possessing a methoxy group at the 7α-position of the cephem nucleus, and in being resistant to β-lactamase.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:55429,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,cephamycin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Any member of the cephamycin sub-group of cephem antibiotics, differing from cephalosporins in possessing a methoxy group at the 7α-position of the cephem nucleus, and in being resistant to β-lactamase.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001248,built environment specimen,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001248,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,built environment specimen,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_03501121,building corridor,passage|hall,A building part which is a narrow hall or passage in a building with rooms leading off it.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,passage|hall,hallway,,,,ENVO:03501121,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,building corridor,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A building part which is a narrow hall or passage in a building with rooms leading off it.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002231,PFGE Spel pattern,,A PFGE pattern resulting from DNA fragmentation induced by the Spel enzyme.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002231,,,,,,,,,,,,,,2019-11-25T09:07:26Z,,,,,,,,,,,,,,,,,,,PFGE Spel pattern,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://orcid.org/0000-0002-8844-9165,,,,A PFGE pattern resulting from DNA fragmentation induced by the Spel enzyme.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000918,open animal house,,An animal house which is only partially surrounded by a building envelope.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01000918,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,open animal house,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An animal house which is only partially surrounded by a building envelope.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001916,tenths,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001916,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0001917,,,,,,,,,,,tenths,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000063,ribotyping,,"Ribotyping involves the fingerprinting of genomic DNA restriction fragments that contain all or part of the genes coding for the 16S and 23S rRNA. By digesting the genes with a specific restriction enzyme, fragments of different lengths are generated. By performing a Gel electrophoresis with the digested samples, the fragments can be visualised as lines on the gel, where larger fragments are close to the start of the gel, and smaller fragments further down. After blotting onto a matrix and probing, these lines form a unique pattern for each species and can be used to identify the origin of the DNA, almost like a barcode can identify a product.",FALSE,,,,,,,,,,,,,,,,,,,,,http://en.wikipedia.org/wiki/Ribotyping,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000063,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,,,,,,,ribotyping,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Ribotyping involves the fingerprinting of genomic DNA restriction fragments that contain all or part of the genes coding for the 16S and 23S rRNA. By digesting the genes with a specific restriction enzyme, fragments of different lengths are generated. By performing a Gel electrophoresis with the digested samples, the fragments can be visualised as lines on the gel, where larger fragments are close to the start of the gel, and smaller fragments further down. After blotting onto a matrix and probing, these lines form a unique pattern for each species and can be used to identify the origin of the DNA, almost like a barcode can identify a product.",,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000053,false positive rate,,a false positive rate is a data item which accounts for the proportion of incorrect rejection of a true null hypothesis.,FALSE,,,,,,,,,,,,,,,,,,,,,"PRS,AGB adapted from wikipedia and wolfram alpha",,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000053,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,false positive rate,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra|Alejandra Gonzalez-Beltran|Orlaith Burke,,,,a false positive rate is a data item which accounts for the proportion of incorrect rejection of a true null hypothesis.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000225,beef back rib (raw),,A raw beef back rib cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000225,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef back rib (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef back rib cut.,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_1266728,Mus musculus domesticus x M. m. molossinus,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,Mus musculus domesticus x M. m. molossinus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:1266728,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Mus musculus domesticus x M. m. molossinus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0009778,pleural sac,,A serous sac that has the pleura and the pleural cavity as parts.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SCTID:361996004|FMA:9690|EHDAA2:0004737,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0009778,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,pleural sac,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A serous sac that has the pleura and the pleural cavity as parts.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001607,investigation datum,,"A categorical investigation datum is a datum pertaining to some entity examined for scientific research or diagnostic purposes and which has a scope that is broader than one of the clinical, environmental or epidemiological domains.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001607,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,investigation datum,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"A categorical investigation datum is a datum pertaining to some entity examined for scientific research or diagnostic purposes and which has a scope that is broader than one of the clinical, environmental or epidemiological domains.",,,,,,,,
http://purl.obolibrary.org/obo/OBA_2001000,age of onset of Alzheimer disease,age at onset of Alzheimer disease|age Alzheimer disease symptoms begin,The age at which Alzheimer disease manifestations first appear.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,age at onset of Alzheimer disease|age Alzheimer disease symptoms begin,,,,OBA:2001000,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age of onset of Alzheimer disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The age at which Alzheimer disease manifestations first appear.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001627,temperature of sample,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001627,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/PATO_0000146,,,,,,temperature of sample,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000288,pork leg shank half (raw),,A raw pork leg shank half cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000288,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pork leg shank half (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw pork leg shank half cut.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0001894,email address of sequencing facility contact person,,An email address of the contact representative at the sequencing facility,FALSE,,,,,,,,,,,,,,,,,,,,,NIAID GSCID-BRC metadata working group,,,,,email address of sequencing facility contact person,,,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0001894,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,email address of sequencing facility contact person,,,,,,,Sequencing Facility Contact's email,,,,,,,,,,,,,,,,,,,,,"PERSON: Chris Stoeckert, Jie Zheng",,,,An email address of the contact representative at the sequencing facility,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000159,beef culotte roast,,A beef roast cut from the triangle-shaped muscle that caps or covers the top sirloin.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000159,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef culotte roast,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A beef roast cut from the triangle-shaped muscle that caps or covers the top sirloin.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490360,acryl-nitrile container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0360,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490360,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,acryl-nitrile container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490147,paperboard container with aluminum foil liner,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0147,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490147,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,paperboard container with aluminum foil liner,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_90852,N-sulfonylcarboxamide,,A mixed diacylamine resulting from the formal condensation of the nitrogen of a carboxamide with a sulphonic acid.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:90852,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,N-sulfonylcarboxamide,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A mixed diacylamine resulting from the formal condensation of the nitrogen of a carboxamide with a sulphonic acid.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0001538,Protuberant abdomen,Extended belly|Belly sticks out|Abdominal protuberance,A thrusting or bulging out of the abdomen.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C1854928,,,,,,,,,,,,,,,,,,,,,,,,,Extended belly|Belly sticks out|Abdominal protuberance,,,,HP:0001538,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Protuberant abdomen,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A thrusting or bulging out of the abdomen.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_40009,D-cycloserine,,"A 4-amino-1,2-oxazolidin-3-one that has <i>R</i> configuration. It is an antibiotic produced by <em>Streptomyces garyphalus</em> or <em>S. orchidaceus</em> and is used as part of a multi-drug regimen for the treatment of tuberculosis when resistance to, or toxicity from, primary drugs has developed. An analogue of <small>D</small>-alanine, it interferes with bacterial cell wall synthesis in the cytoplasm by competitive inhibition of <small>L</small>-alanine racemase (which forms <small>D</small>-alanine from <small>L</small>-alanine) and  <small>D</small>-alanine—<small>D</small>-alanine ligase (which incorporates <small>D</small>-alanine into the pentapeptide required for peptidoglycan formation and bacterial cell wall synthesis).",FALSE,,,,,,,Cs|CYC,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:4030,,,,,,CHEBI:40009,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,D-cycloserine,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A 4-amino-1,2-oxazolidin-3-one that has <i>R</i> configuration. It is an antibiotic produced by <em>Streptomyces garyphalus</em> or <em>S. orchidaceus</em> and is used as part of a multi-drug regimen for the treatment of tuberculosis when resistance to, or toxicity from, primary drugs has developed. An analogue of <small>D</small>-alanine, it interferes with bacterial cell wall synthesis in the cytoplasm by competitive inhibition of <small>L</small>-alanine racemase (which forms <small>D</small>-alanine from <small>L</small>-alanine) and  <small>D</small>-alanine—<small>D</small>-alanine ligase (which incorporates <small>D</small>-alanine into the pentapeptide required for peptidoglycan formation and bacterial cell wall synthesis).",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100697,sediment depth,sediment_depth|sediment depth,A data field which describes the depth of some sediment.,FALSE,,,,,,,PCDS:sediment_depth,,,,,,,PCDS: Provide the numerical depth only of the sediment (without units).,,,,,,,,,,,,,,PCDS: 2,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,sediment_depth|sediment depth,sediment depth slot,,,,GENEPIO:0100697,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-1107-9135,2023-05-18T05:09:29.167Z,,,,,,,,,,,,,,,,,,,sediment depth,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the depth of some sediment.,,PCDS: The depth of some sediment.,,,,,,
http://purl.obolibrary.org/obo/FOODON_03460159,mineral added claim,,A claim that a mineral has been added to an edible product.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=H0159,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03460159,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,mineral added claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A claim that a mineral has been added to an edible product.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100753,metagenomeassembled genome mag id,metagenome-assembled genome (MAG) ID,An identifier field which describes the user defined name assigned to a genome reconstructed from metagenomic data.,FALSE,,,,,,,PCDS:metagenomeassembled_genome_mag_id,,,,,,,PCDS: Store the MAG ID.,,,,,,,,,,,Drafted 2023-07-27,,,PCDS: XYZ1234.1,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,metagenome-assembled genome (MAG) ID,metagenome-assembled genome identifier|metagenome-assembled genome (MAG) ID slot|metagenome assembled genome ID,,,,GENEPIO:0100753,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-20T20:25:24.926Z,,,,,,,,,,,,,,,,,,,metagenomeassembled genome mag id,,,,,,,,,,,,,,,,,,,,,,https://ena-docs.readthedocs.io/en/latest/submit/assembly/metagenome/mag.html#assigned-accession-numbers,,,,,,,,,,An identifier field which describes the user defined name assigned to a genome reconstructed from metagenomic data.,,PCDS: The user-defined identifier assigned to a genome reconstructed from metagenomic data.,,,,,,
http://purl.obolibrary.org/obo/FOODON_03480028,packed in carbon dioxide,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=K0028,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03480028,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,packed in carbon dioxide,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000330,pork butt steak,,A pork steak that is derived from the Shoulder Blade. The cut location is just above the shoulder joint adjacent to the picnic.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000330,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pork butt steak,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A pork steak that is derived from the Shoulder Blade. The cut location is just above the shoulder joint adjacent to the picnic.,,,,,,,,
http://purl.obolibrary.org/obo/ARO_3004433,non wild-type,,"A microbe whose susceptibility to antibiotics differs from that of a reference susceptible microbe, meaning that the microbe is resistant to the particular antibiotic.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ARO:3004433,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/aro.owl,,,,,,,,,non wild-type,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A microbe whose susceptibility to antibiotics differs from that of a reference susceptible microbe, meaning that the microbe is resistant to the particular antibiotic.",,,,,,,,
http://purl.obolibrary.org/obo/HP_0001742,Nasal congestion,Congestion of nose,Reduced ability to pass air through the nasal cavity often leading to mouth breathing.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0027429|UMLS:C0027424|SNOMEDCT_US:68235000|SNOMEDCT_US:267100006|SNOMEDCT_US:232209000,,,,,,,,,,,,,,,,,,,,,,,,,Stuffy nose|Obstruction of nose|Nasal obstruction|Nasal blockage|Blockage of nose,Congestion of nose,,,HP:0001742,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Nasal congestion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Reduced ability to pass air through the nasal cavity often leading to mouth breathing.,,,,,,,,
http://purl.obolibrary.org/obo/ECTO_1000040,exposure to restaurant,restaurant exposure,A exposure event involving the interaction of an exposure receptor to restaurant.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,restaurant exposure,,,,ECTO:1000040,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ecto.owl,,,,,,,,,exposure to restaurant,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A exposure event involving the interaction of an exposure receptor to restaurant.,,,,,,,,
http://purl.obolibrary.org/obo/ECTO_1000041,exposure to retail shop,shop exposure,A exposure event involving the interaction of an exposure receptor to shop.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,shop exposure,,,,ECTO:1000041,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ecto.owl,,,,,,,,,exposure to retail shop,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A exposure event involving the interaction of an exposure receptor to shop.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020871,bison chop (raw),,A raw bison chop.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020871,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,bison chop (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw bison chop.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00005384,lamb square-cut shoulder chop (raw),,A raw lamb square-cut shoulder chop.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00005384,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lamb square-cut shoulder chop (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw lamb square-cut shoulder chop.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_35875,imidazopyrimidine,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:35875,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,imidazopyrimidine,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_33241,oxoacid derivative,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:33241,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,oxoacid derivative,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001548,pre-existing condition,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001548,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,pre-existing condition,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000938,hot tub,Jacuzzi,"A manufactured product which may hold a volume of heated water suitable for one or more humans to bathe in, usually for the purposes of hydrotherapy or pleasure.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,spa,,Jacuzzi,,,ENVO:01000938,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,hot tub,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A manufactured product which may hold a volume of heated water suitable for one or more humans to bathe in, usually for the purposes of hydrotherapy or pleasure.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001857,3D space,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0001866,,,,,,,,,,,,,,,,,GENEPIO:0001857,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,3D space,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001234,collection device,collection_device|collection device,A data field which describes the instrument or container used to collect the sample.,FALSE,,,,,,,PCDS:collection_device,,,,,,,"PCDS: Provide a descriptor of the device used for sampling. Use the picklist provided in the template. If not applicable, choose a null value.",,,,,,,,,,,,,,PCDS: Swab,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,collection_device|collection device,collection device slot,,,,GENEPIO:0001234,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,collection device,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the instrument or container used to collect the sample.,,PCDS: The instrument or container used to collect the sample.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001440,prior sarscov2 antiviral treatment date,prior SARS-CoV-2 antiviral treatment date,A data field which describes the date treatment was first administered during the prior Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection.,FALSE,,,,,,,PCDS:prior_sarscov2_antiviral_treatment_date,,,,,,,PCDS: Provide the date that the antiviral treatment agent was first administered during the most recenrt prior infection. Provide the prior SARS-CoV-2 treatment date in ISO 8601 standard format 'YYYY-MM-DD'.,,,,,,,,,,,,,,PCDS: 2021-01-23,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,prior SARS-CoV-2 antiviral treatment date,prior SARS-CoV-2 antiviral treatment date slot,,,,GENEPIO:0001440,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,prior sarscov2 antiviral treatment date,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the date treatment was first administered during the prior Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection.,,PCDS: The date treatment was first administered during the prior SARS-CoV-2 infection.,,,,,,
http://purl.obolibrary.org/obo/HP_0002789,Tachypnea,Polypnea|Increased respiratory rate or depth of breathing,Very rapid breathing.,FALSE,,,,,,,,,,,,,,"In adults, a beathing rate of between 12-20 breaths per minute is normal and tachypnea is present with a ventilatory rate greater than 20 breaths per minute.",,,,,,,,,,,,,,,,,,UMLS:C0231835|SNOMEDCT_US:271823003,,,,,,,,,,,,,,,,,,,,,,,HP:0004346|HP:0002874,,Polypnea|Increased respiratory rate or depth of breathing,,,,HP:0002789,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Tachypnea,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Very rapid breathing.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000028,beef sirloin tip roast (raw),,A raw beef sirloin tip roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000028,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef sirloin tip roast (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef sirloin tip roast.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100614,virus transport medium,,A processed material which is a medium designed to promote longevity of a viral sample.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",virus transport medium,,,,,ready for release,http://purl.obolibrary.org/obo/OBI_0002866,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100614,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,virus transport medium,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://orcid.org/0000-0002-8844-9165,,,https://github.com/obi-ontology/obi/issues/1194,A processed material which is a medium designed to promote longevity of a viral sample.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_7447,nafcillin,,A penicillin in which the substituent at position 6 of the penam ring is a (2-ethoxy-1-naphthoyl)amino group.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:44256,,,,,,CHEBI:7447,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,nafcillin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A penicillin in which the substituent at position 6 of the penam ring is a (2-ethoxy-1-naphthoyl)amino group.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000048,ocean biome,,A marine biome which is determined by an ocean.,FALSE,,,,,,,,,,,,,,"Ocean biomes are determined by major bodies of saline water, principal components of the hydrosphere. Approximately 71% of the Earth's surface is covered by ocean, a continuous body of water that is customarily divided into several principal oceans and smaller seas. More than half of this area is over 3,000 metres (9,800 ft) deep. Average oceanic salinity is around 35 parts per thousand (ppt) (3.5%), and nearly all seawater has a salinity in the range of 30 to 38 ppt.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01000048,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,envoPolar,,,,,,,,ocean biome,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A marine biome which is determined by an ocean.,,,,,,,,
http://purl.obolibrary.org/obo/PATO_0000117,size,,A morphology quality inhering in a bearer by virtue of the bearer's physical magnitude.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PATO:0000117,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/pato.owl,http://purl.oboInOwllibrary.org/oboInOwl/pato#scalar_slim|http://purl.oboInOwllibrary.org/oboInOwl/pato#attribute_slim,,,,,,,,size,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A morphology quality inhering in a bearer by virtue of the bearer's physical magnitude.,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_10239,Viruses,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,Viruses,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:10239,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Viruses,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00001282,beef (ground),,Beef that has been ground.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00001282,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef (ground),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Beef that has been ground.,,,,,,,,
http://purl.obolibrary.org/obo/IAO_0000078,curation status specification,,The curation status of the term. The allowed values come from an enumerated list of predefined terms. See the specification of these instances for more detailed definitions of each enumerated value.,FALSE,,,,,,,,,,,,,,,,,,,,,OBI_0000266|GROUP:OBI:<http://purl.obolibrary.org/obo/obi>,,,,Better to represent curation as a process with parts and then relate labels to that process (in IAO meeting),curation status specification,,,,,http://purl.obolibrary.org/obo/IAO_0000125,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,IAO:0000078,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/iao.owl,,,,,,,,,curation status specification,,,,,,,,,,,,,,,,,,,,,,,,,,,,PERSON:Bill Bug,,,,The curation status of the term. The allowed values come from an enumerated list of predefined terms. See the specification of these instances for more detailed definitions of each enumerated value.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00003961,British Virgin Islands,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,INSDC:country:british virgin islands,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00003961,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,British Virgin Islands,http://purl.obolibrary.org/obo/GAZ_00003960,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02021036,buffalo roast (boneless),,A boneless buffalo roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02021036,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,buffalo roast (boneless),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A boneless buffalo roast.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C53287,Health Care Professional,Health Professional|Health Care Professional|HEALTH CARE PROFESSIONAL,A person qualified to be engaged in activity directed at preservation of mental and physical health by diseases prevention and treatment as a source of livelihood.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Health Professional|Health Care Professional|HEALTH CARE PROFESSIONAL,,,,NCIT:C53287,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Health Care Professional,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A person qualified to be engaged in activity directed at preservation of mental and physical health by diseases prevention and treatment as a source of livelihood.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000254,environmental system,environment,A system which has the disposition to environ one or more material entities.,FALSE,,,,,,,,,,,,,,"In ENVO's alignment with the Basic Formal Ontology, this class is being considered as a subclass of a proposed BFO class ""system"". The relation ""environed_by"" is also under development. Roughly, a system which includes a material entity (at least partially) within its site and causally influences that entity may be considered to environ it. Following the completion of this alignment, this class' definition and the definitions of its subclasses will be revised.",,,,,,,,,,,,,,,,,,EcoLexicon:environment,,,,,,,,,,,,,,,,,,,,,,,,,environment,,,,ENVO:01000254,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/rbo.owl|http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,environmental system,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A system which has the disposition to environ one or more material entities.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020236,"chicken breast (skinless, boneless, raw)",,"A raw, skinless and boneless chicken breast.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020236,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"chicken breast (skinless, boneless, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A raw, skinless and boneless chicken breast.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C54196,Cardiac Death,Cardiac Death,The cessation of life due to heart abnormalities or disease.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Cardiac Death,,,,NCIT:C54196,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Cardiac Death,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The cessation of life due to heart abnormalities or disease.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_8450004,intercostal element,,An anatomical structure located within an intercostal space.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:8450004,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,intercostal element,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An anatomical structure located within an intercostal space.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_23114,chloride salt,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:23114,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,chloride salt,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0101079,AMR reference database version,AMR reference database version,A data field which describes the version number of the reference database used to perform an in silico antimicrobial resistance determinant identification or analysis.,FALSE,,,,,,,PCDS:amr_reference_database_version,,,,,,,PCDS: Provide the version number of the reference database used for AMR analysis.,,,,,,,,,,,,,,PCDS: 3.2.9,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,AMR reference database version,AMR reference database version slot,,,,GENEPIO:0101079,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,AMR reference database version,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the version number of the reference database used to perform an in silico antimicrobial resistance determinant identification or analysis.,,PCDS: The version number of the reference database used to perform an in silico antimicrobial resistance determinant identification/analysis.,,,,,,
http://purl.obolibrary.org/obo/NCIT_C894,Toxin,toxin|Toxins|Toxin,"A chemical, physical, or biological agent that causes disease or some alteration of the normal structure and function of an organism. Usually refers to poisonous substance produced during the metabolism and growth of certain microorganisms and some higher plant and animal species, or any poisonous isomer, homolog, or derivative of such a substance. It causes either permanent or reversible injury to the health of a living thing on contact or absorption, typically by interacting with biological macromolecules such as enzymes and receptors. Onset of effects may be immediate or delayed, and impairments may be slight or severe. (NCI)",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,toxin|Toxins|Toxin,,,,NCIT:C894,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Toxin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A chemical, physical, or biological agent that causes disease or some alteration of the normal structure and function of an organism. Usually refers to poisonous substance produced during the metabolism and growth of certain microorganisms and some higher plant and animal species, or any poisonous isomer, homolog, or derivative of such a substance. It causes either permanent or reversible injury to the health of a living thing on contact or absorption, typically by interacting with biological macromolecules such as enzymes and receptors. Onset of effects may be immediate or delayed, and impairments may be slight or severe. (NCI)",,,,,,,,
http://purl.obolibrary.org/obo/BFO_0000040,material entity,material type,"An independent continuant that is spatially extended whose identity is independent of that of other entities and can be maintained through time.|An independent continuant  that is spatially extended whose identity is independent of that of other entities and can be maintained through time.|An independent continuant that is spatially extended whose identity is independent of that of other entities and can be maintained through time.|A material entity is an entity that exists in full during the length of time of its existence, persists through this time while maintaining its identity and has no temporal parts. For example a heart, a human, a fly, a microarray.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,material entity|material entity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.ifomis.org/bfo/1.1/snap#MaterialEntity,,material type,,,,BFO:0000040,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl|http://purl.obolibrary.org/obo/ido/brucellosis.owl|http://purl.obolibrary.org/obo/uberon.owl|http://purl.obolibrary.org/obo/rbo.owl|http://purl.obolibrary.org/obo/pco.owl|http://purl.obolibrary.org/obo/pato.owl|http://purl.obolibrary.org/obo/mondo.owl|http://purl.obolibrary.org/obo/ido.owl|http://purl.obolibrary.org/obo/foodon.owl|http://purl.obolibrary.org/obo/envo.owl|http://purl.obolibrary.org/obo/cob.owl|http://purl.obolibrary.org/obo/clo.owl|http://purl.obolibrary.org/obo/apollo_sv.owl,,,,,,,,,material entity|material entity,,,,,,,,,,,,,,,,,,,,,,,,,,,,James Malone,,,,"An independent continuant that is spatially extended whose identity is independent of that of other entities and can be maintained through time.|An independent continuant  that is spatially extended whose identity is independent of that of other entities and can be maintained through time.|An independent continuant that is spatially extended whose identity is independent of that of other entities and can be maintained through time.|A material entity is an entity that exists in full during the length of time of its existence, persists through this time while maintaining its identity and has no temporal parts. For example a heart, a human, a fly, a microarray.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0003358,obsolete: surface wipe,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0003358,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: surface wipe,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/OBI_0002824,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102049,target taxonomic name,,"PCDS: The target taxonomic name refers to the specific species, genus, or other taxonomic classification that the assay or diagnostic test is designed to identify, detect, or characterize. This may include the full binomial name (Genus species) or a higher taxonomic rank (i.e., genus, family) when species-level identification is not applicable. Avoid abbreviations. Search for taxonomic names here: ncbi.nlm.nih.gov/taxonomy.",FALSE,,,,,,,PCDS:target_taxonomic_name_*,,,,,,,"PCDS: The target taxonomic name refers to the specific species, genus, or other taxonomic classification that the assay or diagnostic test is designed to identify, detect, or characterize. This may include the full binomial name (Genus species) or a higher taxonomic rank (i.e., genus, family) when species-level identification is not applicable. Avoid abbreviations. Search for taxonomic names here: ncbi.nlm.nih.gov/taxonomy.",,,,,,,,,,,,,,PCDS: Respiratory syncytial virus,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102049,,,,,,,,,,,,,,2026-04-13T17:16:47.336Z,,,,,,,,,,,,,,,,,,,target taxonomic name,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"PCDS: The scientific name of the organism or taxon that is the focus of the study, assay, or diagnostic test.",,,,,,
http://purl.obolibrary.org/obo/ENVO_01000180,tundra biome,,A tundra ecosystem which is undergoing climactic ecological succession.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SPIRE:Tundra,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01000180,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,wwfBiome|envoPolar,,,,,,,,tundra biome,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A tundra ecosystem which is undergoing climactic ecological succession.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0868,Northern Irish,,"Individuals who self-identify or are reported by authors as living in or originating from Northern Ireland, a nation of the United Kingdom and that is located on the island of Ireland.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0868,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Northern Irish,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Individuals who self-identify or are reported by authors as living in or originating from Northern Ireland, a nation of the United Kingdom and that is located on the island of Ireland.",,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0865,English,,"Individuals who self-identify or are reported by authors as living in or originating from England, a nation of the United Kingdom and that is located on the island of Great Britain.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0865,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,English,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Individuals who self-identify or are reported by authors as living in or originating from England, a nation of the United Kingdom and that is located on the island of Great Britain.",,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0867,Scottish,,"Individuals who self-identify or are reported by authors as living in or originating from Scotland, a nation of the United Kingdom and that is located on the island of Great Britain.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0867,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Scottish,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Individuals who self-identify or are reported by authors as living in or originating from Scotland, a nation of the United Kingdom and that is located on the island of Great Britain.",,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0866,Welsh,,"Individuals who self-identify or are reported by authors as living in or originating from Wales, a nation of the United Kingdom and that is located on the island of Great Britain.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0866,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Welsh,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Individuals who self-identify or are reported by authors as living in or originating from Wales, a nation of the United Kingdom and that is located on the island of Great Britain.",,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00005841,Saint Martin,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00005841,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Saint Martin,http://purl.obolibrary.org/obo/GAZ_00044587,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00014914,Province (Oman),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00014914,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Province (Oman),http://purl.obolibrary.org/obo/GAZ_00005283,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_267413,balsalazide,,A monohydroxybenzoic acid consisting of 5-aminosalicylic acid (mesalazine) linked to 4-aminobenzoyl-β-alanine <em>via</em> an azo bond.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:267413,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,balsalazide,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A monohydroxybenzoic acid consisting of 5-aminosalicylic acid (mesalazine) linked to 4-aminobenzoyl-β-alanine <em>via</em> an azo bond.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00005464,"populated place, Mauritius",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00005464,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Mauritius",http://purl.obolibrary.org/obo/GAZ_00003745,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00005469,"populated place, Morocco",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00005469,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Morocco",http://purl.obolibrary.org/obo/GAZ_00000565,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000073,building,,A permanent walled and roofed construction.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Building|TGN:51011|LTER:76|Geonames:S.BLDG|FTT:42,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00000073,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,building,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A permanent walled and roofed construction.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0007779,transudate,,"Any bodily fluid that has passed through a membrane such as the capillary wall, as a result of unbalanced hydrostatic and osmotic forces.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ncithesaurus:Transudate|MESH:D005122|GAID:1195|FMA:12276,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0007779,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,transudate,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Any bodily fluid that has passed through a membrane such as the capillary wall, as a result of unbalanced hydrostatic and osmotic forces.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100582,survey study sampling strategy,,A sampling strategy in which individuals and/or materials are sampled for surveillance performed for research purposes.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100582,,,,,,,,,,,,,https://orcid.org/0000-0001-5275-8866,2022-09-23T11:04:13Z,,,,,,,,,,,,,,,,,,,survey study sampling strategy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A sampling strategy in which individuals and/or materials are sampled for surveillance performed for research purposes.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02021037,"buffalo roast (boneless, raw)",,A raw and boneless buffalo roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02021037,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"buffalo roast (boneless, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw and boneless buffalo roast.,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_1437010,Boreoeutheria,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,Boreoeutheria,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:1437010,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Boreoeutheria,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000150,read trimming and filtering software,,The name and version of software used in a bioinformatics workflow to improve the quality of sequencing reads.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000150,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,read trimming and filtering software,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,The name and version of software used in a bioinformatics workflow to improve the quality of sequencing reads.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020864,bison retail cut (raw),,A raw bison retail cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020864,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,bison retail cut (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw bison retail cut.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001062,car travel,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001062,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,car travel,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_9605,Homo,,,FALSE,,,,,,,humans,,,,,,,,,,,,,,,,,,,Homo,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:9605,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Homo,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_9606,Homo sapiens,,,FALSE,,,,,,,human,,,,,,,,,,,,,,,,,,,Homo sapiens,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:9606,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Homo sapiens,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001002,less than,,"The ""less than"" comparator indicates that a given substance was present at less than a given quantity or concentration.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,<,,,,,,GENEPIO:0001002,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,less than,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"The ""less than"" comparator indicates that a given substance was present at less than a given quantity or concentration.",,,,<,,,,
http://purl.obolibrary.org/obo/UBERON_0005906,serous sac,,"Organ with organ cavity, which has as parts a serous membrane and a serous cavity . Examples: pleural sac, pericardial sac, tendon sheath, bursa.[FMA].",FALSE,,,,,,,,,,,,,,See notes for serous membrane,,,,,,,,,,,,,,,,,,SCTID:362890006|FMA:9689,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0005906,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,serous sac,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Organ with organ cavity, which has as parts a serous membrane and a serous cavity . Examples: pleural sac, pericardial sac, tendon sheath, bursa.[FMA].",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0007311,sputum,,"Matter ejected from the lungs, bronchi, and trachea, through the mouth.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0038056|NCIT:C13278|MESH:D013183|MA:0002536|GAID:1171|FMA:312401|EMAPA:36553|CALOHA:TS-0963|BTO:0001297,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0007311,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,sputum,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Matter ejected from the lungs, bronchi, and trachea, through the mouth.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03411347,FOODON_03411347,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03411347,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000299,ribeye roast (raw),,A raw ribeye roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000299,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,ribeye roast (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw ribeye roast.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001047,bottled water,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001047,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,bottled water,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490168,aluminum tube,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0168,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490168,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,aluminum tube,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03309210,"herring fillet (pickled, skinless)",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://bioregistry.io/reference/siren:F9210,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03309210,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"herring fillet (pickled, skinless)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001747,reagent derived material from specimen,,"Reagent: material studied was obtained by chemical reaction, precipitation.",FALSE,,,,,,,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/books/NBK54364/,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001747,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,reagent derived material from specimen,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"Reagent: material studied was obtained by chemical reaction, precipitation.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001774,contig L99,,Contig L99 is the number of contigs equal to or longer than contig N99. The length of the assembly itself is used in the calculation.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001774,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,contig L99,,,,,Assembly QC,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,Contig L99 is the number of contigs equal to or longer than contig N99. The length of the assembly itself is used in the calculation.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100913,precipitation measurement method,precipitation measurement method,An environmental data field which describes the process used to measure the amount of water which has fallen during a precipitation process.,FALSE,,,,,,,PCDS:precipitation_measurement_method,,,,,,,PCDS: Provide the name of the procedure or method used to measure precipitation.,,,,,,,,,,,,,,PCDS: Rain gauge over a 12 hour period prior to sample collection,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,precipitation measurement method,precipitation measurement method slot,,,,GENEPIO:0100913,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,precipitation measurement method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the process used to measure the amount of water which has fallen during a precipitation process.,,PCDS: The process used to measure the amount of water which has fallen during a precipitation process.,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530141,aloyau,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0141,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530141,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,aloyau,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_03501180,patient room,patient bed room|examination room,A room which is used for patient care during a patient's visit or stay in a healthcare facility.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,patient-care room,patient bed room|examination room,,,ENVO:03501180,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,patient room,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A room which is used for patient care during a patient's visit or stay in a healthcare facility.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100940,environmental conditions and measurements field category,PCDS:Environmental conditions and measurements,A data field category which refers to fields which describe environmental conditions and measurements.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,(2026-02-28) Under review for deprecation.,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,PCDS:Environmental conditions and measurements,,,,,GENEPIO:0100940,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-21T01:45:57.696Z,,,,,,,,,,,,,,,,,,,environmental conditions and measurements field category,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field category which refers to fields which describe environmental conditions and measurements.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510131,"\""less\""label claim",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0131,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510131,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"""less""label claim",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510172,unenriched claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0172,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510172,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,unenriched claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00003029,beef steak,,A beef meat cut that has a flat-cut appearance.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00003029,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef steak,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A beef meat cut that has a flat-cut appearance.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_76892,A47934(2-),,"An organic anion obtained by deprotonation of the carboxy, sulfo and one of the hydroxy groups as well as protonation of the amino group of A47934; major species at pH 7.3.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:76892,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,A47934(2-),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An organic anion obtained by deprotonation of the carboxy, sulfo and one of the hydroxy groups as well as protonation of the amino group of A47934; major species at pH 7.3.",,,,,,,,
http://purl.obolibrary.org/obo/OBI_0000018,material supplier role,,"a role realized through the process of supplying materials such as animal subjects, reagents or other materials used in an investigation.",FALSE,,,,,,,supplier|material provider role,,,,,,,,,,,,,,,,,,"Supplier role is a special kind of service, e.g. biobank",material supplier role,,Jackson Labs is an organization which provide mice as experimental material,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0000018,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,material supplier role,,,,,,,,,,,,,,,,,,,,,,,,,,,,PERSON:Jennifer Fostel,,,,"a role realized through the process of supplying materials such as animal subjects, reagents or other materials used in an investigation.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001243,collection protocol,collection protocol,A data field which describes the name and version of a particular protocol used for sampling.,FALSE,,,,,,,PCDS:collection_protocol,,,,,,,PCDS: Free text.,,,,,,,,,,,,,,PCDS: SC2SamplingProtocol 1.2,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,collection protocol,collection protocol slot,,,,GENEPIO:0001243,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,collection protocol,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the name and version of a particular protocol used for sampling.,,PCDS: The name and version of a particular protocol used for sampling.,,,,,,
http://purl.obolibrary.org/obo/FOODON_03310939,beef chuck (raw),,A raw beef chuck cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://bioregistry.io/reference/siren:F10939,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03310939,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef chuck (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef chuck cut.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C15189,Biopsy Procedure,biopsy|Bx|Biopsy Procedure|Biopsy|BIOPSY_TYPE|BIOPSY,"The removal of tissue specimens or fluid from the living body for microscopic examination, performed to establish a diagnosis.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,biopsy|Bx|Biopsy Procedure|Biopsy|BIOPSY_TYPE|BIOPSY,,,,NCIT:C15189,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Biopsy Procedure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The removal of tissue specimens or fluid from the living body for microscopic examination, performed to establish a diagnosis.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100564,sequence failed quality control datum,,A data item which is a statement confirming that quality control processes were carried out and that the sequence did not meet the assessment criteria.,FALSE,,,,,,,sequence failed quality control,,,,,,,"Example: Use this statement to indicate that quality control processes were carried out and that the sequence failed to meet the assessment criteria. Note: quality control here refers to quality of the raw reads, consensus sequence or assembly, not the qaulity of analytical results e.g. lineage assignment.",,,,,,,,,,,,,,,,,ready for release,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100564,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-1107-9135,2023-01-23T00:42:19.315Z,,,,,,,,,,,,,,,,,,,sequence failed quality control datum,,,,,,,,,,,,,,,,,,,,,,The PHA4GE QC Contextual Data Tags Specification: https://github.com/pha4ge/contextual-data-qc-tags,,,,,,,,,,A data item which is a statement confirming that quality control processes were carried out and that the sequence did not meet the assessment criteria.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00005382,"populated place, Uganda",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00005382,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Uganda",http://purl.obolibrary.org/obo/GAZ_00001102,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HP_0002239,Gastrointestinal hemorrhage,Gastrointestinal haemorrhage|Gastrointestinal bleeding|GI hemorrhage|GI haemorrhage,Hemorrhage affecting the gastrointestinal tract.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0017181|SNOMEDCT_US:74474003,,,,,,,,,,,,,,,,,,,,,,,,,Gastrointestinal haemorrhage|Gastrointestinal bleeding|GI hemorrhage|GI haemorrhage,,,,HP:0002239,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Gastrointestinal hemorrhage,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Hemorrhage affecting the gastrointestinal tract.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490424,closing capsule,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0424,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490424,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,closing capsule,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_77,gastrointestinal system disease,,A disease of anatomical entity that is located_in the gastrointestinal tract.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:77,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,gastrointestinal system disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A disease of anatomical entity that is located_in the gastrointestinal tract.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_03501204,prison facility,remand centre|remand center|penitentiary|lock-up|jail|gaol|detention centre|detention center|correctional facility|correctional center correctional centre,A human construction which is used to forcibly confine humans.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,remand centre|remand center|penitentiary|lock-up|jail|gaol|detention centre|detention center|correctional facility|correctional center correctional centre,,,,ENVO:03501204,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,prison facility,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A human construction which is used to forcibly confine humans.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100249,attendee role,,A role inhering in a person that is realized when the bearer is present on a given occasion or at a given place.,FALSE,,,,,,,Attendee,,,,,,,,,,,,,,https://www.merriam-webster.com/dictionary/attendee,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100249,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,attendee role,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A role inhering in a person that is realized when the bearer is present on a given occasion or at a given place.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001735,human clinical specimen - invasive,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001735,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,human clinical specimen - invasive,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_22565,ansamycin,,A class of macrocyclic lactams that consist of an aromatic (phenyl or naphthyl) or quinonoid (benzoquinone or naphthoquinone) moiety that is bridged by an aliphatic chain.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:22565,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,ansamycin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A class of macrocyclic lactams that consist of an aromatic (phenyl or naphthyl) or quinonoid (benzoquinone or naphthoquinone) moiety that is bridged by an aliphatic chain.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0011164,neurocranium bone,chondrocranium bone,A bone that is part of a neurocranium [Automatically generated definition].,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SCTID:120229002|MA:0001478|EMAPA:35238,,,,,,,,,,,,,,,,,,,,,,,,,chondrocranium bone,,,,UBERON:0011164,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,neurocranium bone,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A bone that is part of a neurocranium [Automatically generated definition].,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100804,conductivity measurement method,conductivity measurement method,An environmental data field which describes the method used to measure conductivity.,FALSE,,,,,,,PCDS:conductivity_measurement_method,,,,,,,PCDS: Provide the name of the procedure or technology used to measure conductivity.,,,,,,,,,,,,,,PCDS: Conductivity electrode and meter,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,conductivity measurement method,conductivity measurement method slot,,,,GENEPIO:0100804,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,conductivity measurement method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the method used to measure conductivity.,,PCDS: The method used to measure conductivity.,,,,,,
http://purl.obolibrary.org/obo/FOODON_03500032,pliofilm surface,,"A rubber hydrochloride, first introduced as a packaging film in 1936 in the U.S.A.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=N0032,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03500032,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pliofilm surface,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A rubber hydrochloride, first introduced as a packaging film in 1936 in the U.S.A.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000235,beef tomahawk steak,,A tender bone-in steak from the rib with a long bone and marbling that adds flavour.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000235,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef tomahawk steak,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A tender bone-in steak from the rib with a long bone and marbling that adds flavour.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_27644,chlortetracycline,,A member of the class of tetracyclines with formula C<small><sub>22</sub></small>H<small><sub>23</sub></small>ClN<small><sub>2</sub></small>O<small><sub>8</sub></small> isolated from <em>Streptomyces aureofaciens</em>.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:3653|CHEBI:23164,,,,,,CHEBI:27644,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,chlortetracycline,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A member of the class of tetracyclines with formula C<small><sub>22</sub></small>H<small><sub>23</sub></small>ClN<small><sub>2</sub></small>O<small><sub>8</sub></small> isolated from <em>Streptomyces aureofaciens</em>.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490430,polyethylene terephthalate (pet) container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0430,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490430,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,polyethylene terephthalate (pet) container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HP_0031816,Abnormal oral morphology,,"Any structural anomaly of the mouth, which is also known as the oral cavity.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0031816,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal oral morphology,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Any structural anomaly of the mouth, which is also known as the oral cavity.",,,,,,,,
http://purl.obolibrary.org/obo/HP_0031815,Abnormal oral physiology,,A functional anomaly of the mouth (which is also known as the oral cavity).,FALSE,,,,,,,,,,,,,,"The physiological functions of the mouth include salivary gland secretory function, mastication (chewing) and preparation of food for swallowing.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0031815,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal oral physiology,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A functional anomaly of the mouth (which is also known as the oral cavity).,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000136,Ga-Adangbe,,The Ga-Adangbe are a Western African population with a population size of 2 million.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000136,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Ga-Adangbe,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The Ga-Adangbe are a Western African population with a population size of 2 million.,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000134,Kamba,,A Bantu Eastern population with a population size of 4.663 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000134,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Kamba,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Bantu Eastern population with a population size of 4.663 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000132,Bemba,,A Bantu Southern population with a population size of 5 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000132,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Bemba,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Bantu Southern population with a population size of 5 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000135,Rendille,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000135,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Rendille,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000139,Bulsa,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000139,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Bulsa,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000131,Mossi,Mõõré|Mòoré|Moshi|Moré|More|Mooré|Moore,A Gurma population with a population size of 7.6 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Mõõré|Mòoré|Moshi|Moré|More|Mooré|Moore,,,,AfPO:0000131,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Mossi,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Gurma population with a population size of 7.6 millions,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001087,A.I.D.S status,,"",FALSE,,,,,,,,,,,,,,,,,,,,,"",,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001087,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A.I.D.S status,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03480021,packed in vegetable oil,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=K0021,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03480021,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,packed in vegetable oil,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000181,beef inside skirt steak,,"A beef steak that is a trimmed, boneless portion of the diaphragm muscle which is thicker and more tender than the inside skirt steak cut.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000181,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef inside skirt steak,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A beef steak that is a trimmed, boneless portion of the diaphragm muscle which is thicker and more tender than the inside skirt steak cut.",,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000184,ratio,,"A ratio is a data item which is formed with two numbers r and s is written r/s, where r is the numerator and s is the denominator. The ratio of r to s is equivalent to the quotient r/s.",FALSE,,,,,,,,,,,,,,,,,,,,,"adapted from Wolfram Alpha:
https://www.wolframalpha.com/share/clip?f=d41d8cd98f00b204e9800998ecf8427efdcsig76g7",,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000125,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000184,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,ratio,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra|Orlaith Burke|Alejandra Gonzalez-Beltran,,,,"A ratio is a data item which is formed with two numbers r and s is written r/s, where r is the numerator and s is the denominator. The ratio of r to s is equivalent to the quotient r/s.",,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01001684,interface layer,,"A layer which separates two portions of environmental material which possess 1) differing compositions, 2) a discontinuity of some property, or 3) some derivative of some property in a direction normal to the interface.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01001684,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,interface layer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A layer which separates two portions of environmental material which possess 1) differing compositions, 2) a discontinuity of some property, or 3) some derivative of some property in a direction normal to the interface.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C188268,Middle Name,Middle Name,"The name or names between a person's first name and their surname (last name, family name).",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Middle Name,,,,NCIT:C188268,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Middle Name,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The name or names between a person's first name and their surname (last name, family name).",,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000121,artificial channel,,A channel of a watercource which has been constructed by humans or their technologies.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,EcoLexicon:artificial_channel,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00000121,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,artificial channel,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A channel of a watercource which has been constructed by humans or their technologies.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C48835,Role,"Role, Generic|Role|Generic Role|Functional Role",The usual or expected function of something; the part something plays in an action or event.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Role, Generic|Role|Generic Role|Functional Role",,,,NCIT:C48835,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Role,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The usual or expected function of something; the part something plays in an action or event.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000093,contig count,,A contig count is the count of contigs that belong to a sequence assembly.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,20,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000093,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,http://purl.obolibrary.org/obo/SO_0001462,,,,,,contig count,,,,,Assembly QC,,,,,,,,,,,,,,,,,,,,,,Number of Contigs,Damion Dooley,,,,A contig count is the count of contigs that belong to a sequence assembly.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0101105,diagnostic testing threshold units,,,FALSE,,,,,,,PCDS:diagnostic_testing_threshold_units,,,,,,,,,,,,,,,,,,,,,,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0101105,,,,,,,,,,,,,,2026-04-13T17:18:02.461Z,,,,,,,,,,,,,,,,,,,diagnostic testing threshold units,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PCDS: The unit which are attributed to the threshold above/below which interpretation can be drawn on the diagnostic test,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002222,specimen collection service,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002222,,,,,,,,,,,,,,2019-05-03T02:44:38Z,,,,,,,,,,,,,,,,,,,specimen collection service,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_37622,carboxamide,,"An amide of a carboxylic acid, having the structure RC(=O)NR<small><sub>2</sub></small>. The term is used as a suffix in systematic name formation to denote the ‒C(=O)NH<small><sub>2</sub></small> group including its carbon atom.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:35355|CHEBI:35354,,,,,,CHEBI:37622,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,carboxamide,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An amide of a carboxylic acid, having the structure RC(=O)NR<small><sub>2</sub></small>. The term is used as a suffix in systematic name formation to denote the ‒C(=O)NH<small><sub>2</sub></small> group including its carbon atom.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001121,data field category,data slot category,A data field which receives a range of one or more data fields.|A data field category which receives a range of one or more data fields.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,(2026-04-20): ,,,"An instance of a ""data field category"" that contains the ""bioproject accession field"", ""biosample accession field"", and ""GISAID accession field"".",,,to be replace with external ontology term|http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0100586,,,,,,,,,,,,,,,,,data slot category,,,,GENEPIO:0001121,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|http://orcid.org/0000-0002-9578-0788,2022-11-23T00:33:27.896Z,,,,,,,,,,,,,,,,,,,data field category,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which receives a range of one or more data fields.|A data field category which receives a range of one or more data fields.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_55506,oxacephem,,"Any member of the oxacephem sub-group of cephem antibiotics, in which the thiaazabicyclo moiety of the cephalosporins is replaced by an oxaazabicyclo moiety, and  where R<small><sub>3</sub></small> is -H or -OCH<small><sub>3</sub></small>.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:55506,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,oxacephem,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Any member of the oxacephem sub-group of cephem antibiotics, in which the thiaazabicyclo moiety of the cephalosporins is replaced by an oxaazabicyclo moiety, and  where R<small><sub>3</sub></small> is -H or -OCH<small><sub>3</sub></small>.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0002365,exocrine gland,glandula exocrina|ducted gland,"A gland that secretes products (excluding hormones and other chemical messengers) into ducts (duct glands) which lead directly into the external environment[WP]. Typical exocrine glands include sweat glands, salivary glands, mammary glands, stomach, liver, pancreas.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Exocrine_gland|UMLS:C0015282|SCTID:115976003|NCIT:C12712|MESH:D005088|MA:0002564|GAID:34|FMA:9596|EMAPA:35327|EHDAA2:0003097|CALOHA:TS-2012|BTO:0000765|AEO:0000097,,,,,,,,,,,,,,,,,,,,,,,,,glandula exocrina|ducted gland,,,,UBERON:0002365,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,exocrine gland,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A gland that secretes products (excluding hormones and other chemical messengers) into ducts (duct glands) which lead directly into the external environment[WP]. Typical exocrine glands include sweat glands, salivary glands, mammary glands, stomach, liver, pancreas.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0002368,endocrine gland,glandula endocrina|ductless gland,"Endocrine glands are glands of the endocrine system that secrete their products directly into the circulatory system rather than through a duct.[WP, modified].",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Endocrine_gland|UMLS:C0014133|SCTID:40818001|NCIT:C12704|MESH:D004702|MA:0002563|GAID:335|FMA:9602|EMAPA:35999|EHDAA2:0003098|CALOHA:TS-1300|BTO:0001488|AEO:0000098,,,,,,,,,,,,,,,,,,,,,,,,,glandula endocrina|ductless gland,,,,UBERON:0002368,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,endocrine gland,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Endocrine glands are glands of the endocrine system that secrete their products directly into the circulatory system rather than through a duct.[WP, modified].",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002092,draft sequence repository data - submission to EBI,,"",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002092,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,draft sequence repository data - submission to EBI,,,,,,,,,,,,,,,,,,,,,,https://www.ebi.ac.uk/ena/submit/pathogen-data,,,,,,Damion Dooley,,,,"",,,"order:
GENEPIO:0001644 # isolate identifier
GENEPIO:0001429 # strain identifier
GENEPIO:0001640 # specimen organism taxonomy
GENEPIO:0001079 # serovar 
GENEPIO:0002135 # EBI environmental feature
GENEPIO:0000113 # specimen category
OBI:0001619 # specimen collection date
GENEPIO:0001797 # specimen collector
GENEPIO:0002086 # geographic location
GENEPIO:0000027 # specimen source context
GENEPIO:0002076 # geographic feature
GENEPIO:0001567 # subject taxonomy
GENEPIO:0000110 # subject health status",,,,,
http://purl.obolibrary.org/obo/CHEBI_35740,liposaccharide,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:35740,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,liposaccharide,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000262,electrical conduction unit,,A unit which represents a standard measurement of the movement of electrically charged particles through a transmission medium (electrical conductor).,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:0000262,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,electrical conduction unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A unit which represents a standard measurement of the movement of electrically charged particles through a transmission medium (electrical conductor).,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000261,conduction unit,,A unit which represents a standard measurement of the transmission of an entity through a medium.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:0000261,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,conduction unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A unit which represents a standard measurement of the transmission of an entity through a medium.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000264,siemens,mho |A V^-1,An electrical conduction unit which is equal to A/V.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,mho |A V^-1,,,,UO:0000264,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,siemens,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An electrical conduction unit which is equal to A/V.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00002000,slope,,A solid astronomical body part which is part of the planetary surface between the peak of an elevation or the bottom of a depression and relatively flat surrounding land.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Slope|SWEETRealm:Slope|EcoLexicon:slope,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00002000,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,slope,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A solid astronomical body part which is part of the planetary surface between the peak of an elevation or the bottom of a depression and relatively flat surrounding land.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490363,polycarbonate container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0363,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490363,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,polycarbonate container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_1287,cardiovascular system disease,,"A disease of anatomical entity which occurs in the blood, heart, blood vessels or the lymphatic system that passes nutrients (such as amino acids and electrolytes), gases, hormones, blood cells or lymph to and from cells in the body to help fight diseases and help stabilize body temperature and pH to maintain homeostasis.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:1287,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,cardiovascular system disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A disease of anatomical entity which occurs in the blood, heart, blood vessels or the lymphatic system that passes nutrients (such as amino acids and electrolytes), gases, hormones, blood cells or lymph to and from cells in the body to help fight diseases and help stabilize body temperature and pH to maintain homeostasis.",,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0006025,autosomal recessive disease,"disease, autosomal recessive|disease or disorder, autosomal recessive|autosomal recessive inherited disorder|autosomal recessive inherited disease|autosomal recessive hereditary disorder|autosomal recessive hereditary disease|autosomal recessive disease or disorder",Autosomal recessive form of disease.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0265388|SCTID:85995004|MEDGEN:539209|ICD9:758.5|EFO:1000017|DOID:0050737,,,,,,,,,,,,,,,,,,,,,,,,,"disease, autosomal recessive|disease or disorder, autosomal recessive|autosomal recessive inherited disorder|autosomal recessive inherited disease|autosomal recessive hereditary disorder|autosomal recessive hereditary disease|autosomal recessive disease or disorder",,,,MONDO:0006025,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,autosomal recessive disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Autosomal recessive form of disease.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03601006,wholesale food bulk packaging,,A food packaging type which is used in bulk food packaging and is removed prior to retail distribution.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03601006,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,wholesale food bulk packaging,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A food packaging type which is used in bulk food packaging and is removed prior to retail distribution.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_71415,nitrofurantoin,,"An imidazolidine-2,4-dione that is hydantoin substituted at position 1 by a [(5-nitro-2-furyl)methylene]amino group. An antibiotic that damages bacterial DNA.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:7591,,,,,,CHEBI:71415,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,nitrofurantoin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An imidazolidine-2,4-dione that is hydantoin substituted at position 1 by a [(5-nitro-2-furyl)methylene]amino group. An antibiotic that damages bacterial DNA.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_79389,monovalent inorganic anion,,Any inorganic anion with a valency of one.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:79389,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,monovalent inorganic anion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any inorganic anion with a valency of one.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100003,research sampling,,A sampling strategy in which individuals are sampled in order to perform research.,FALSE,,,,,,,Research,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100003,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,research sampling,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A sampling strategy in which individuals are sampled in order to perform research.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020442,turkey organ (raw),,A raw animal organ that is obtained from a turkey during a butchery process.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020442,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,turkey organ (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw animal organ that is obtained from a turkey during a butchery process.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100976,AB 3130 Genetic Analyzer,,An Applied Biosystems sequencing instrument model which performs capillary electrophoresis to sequence DNA and has 4 capillaries.,FALSE,,,,,,,AB 3130 sequencer,,,,,,,The 3130 series is the successor to the AB PRISM 310.,,,,,,,https://assets.thermofisher.com/TFS-Assets/LSG/manuals/cms_041990.pdf,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100976,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2023-11-28T18:23:15.862Z,,,,,,,,,,,,,,,,,,,AB 3130 Genetic Analyzer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An Applied Biosystems sequencing instrument model which performs capillary electrophoresis to sequence DNA and has 4 capillaries.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0002470,autopod region,autopod,"Terminal segment of free limb, immediately distal to the zeugopod region. The fully developed autopod consists of the autopod skeleton plus associated structures such as integument, muscle tissue, vasculature etc. The autopod is divided into mesopodial, metapodiual, and acropodial segments. Examples: human hand, mouse paw, human foot.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0687080|SCTID:95936004|NCIT:C77660|MIAA:0000091|MAT:0000091|MA:0002714|FMA:83015|EMAPA:32722|EFO:0000877|BTO:0004359,,,,,,,,,,,,,,,,,,,,,,,,autopod,distal segment of free limb|distal free limb segment|autopodium region|autopodium|autopodial segment|autopodial limb segment,,,,UBERON:0002470,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,autopod region,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Terminal segment of free limb, immediately distal to the zeugopod region. The fully developed autopod consists of the autopod skeleton plus associated structures such as integument, muscle tissue, vasculature etc. The autopod is divided into mesopodial, metapodiual, and acropodial segments. Examples: human hand, mouse paw, human foot.",,,,,,,,
http://purl.obolibrary.org/obo/ARO_3004360,antimicrobial resistance testing reference standard,,Uses breakpoints to create standards for interpreting the clinical outcome of an MIC value for a particular microbial species and antimicrobial agent.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ARO:3004360,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/aro.owl,,,,,,,,,antimicrobial resistance testing reference standard,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Uses breakpoints to create standards for interpreting the clinical outcome of an MIC value for a particular microbial species and antimicrobial agent.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_38532,hydrazone,,"Compounds having the structure R<small><sub>2</sub></small>C=NNR<small><sub>2</sub></small>, formally derived from aldehydes or ketones by replacing =O by =NNH<small><sub>2</sub></small> (or substituted analogues).",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:38532,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,hydrazone,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Compounds having the structure R<small><sub>2</sub></small>C=NNR<small><sub>2</sub></small>, formally derived from aldehydes or ketones by replacing =O by =NNH<small><sub>2</sub></small> (or substituted analogues).",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000075,beef shoulder roast,,A roast cut from the beef shoulder clod.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000075,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef shoulder roast,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A roast cut from the beef shoulder clod.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000973,kiosk,,A booth with an open window on one side.,FALSE,,,,,,,,,,,,,,This definition of kiosk is characteristic of the Western hemisphere and used in English-speaking countries.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01000973,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,kiosk,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A booth with an open window on one side.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510063,low fiber food,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0063,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510063,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,low fiber food,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100297,obsolete: cell line cell,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,Replaced with entity from an appropriate domain ontology.,,,,,,,,,,,,,,,,,,,GENEPIO:0100297,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: cell line cell,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/CLO_0000001,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001081,Salmonella serovar name,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001081,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Salmonella serovar name,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HP_0002204,Pulmonary embolism,Blood clot in artery of lung,"An embolus (that is, an abnormal particle circulating in the blood) located in the pulmonary artery and thereby blocking blood circulation to the lung. Usually the embolus is a blood clot that has developed in an extremity (for instance, a deep venous thrombosis), detached, and traveled through the circulation before becoming trapped in the pulmonary artery.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0034065|SNOMEDCT_US:59282003,,,,,,,,,,,,,,,,,,,,,,,,,Blood clot in artery of lung,,,,HP:0002204,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Pulmonary embolism,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An embolus (that is, an abnormal particle circulating in the blood) located in the pulmonary artery and thereby blocking blood circulation to the lung. Usually the embolus is a blood clot that has developed in an extremity (for instance, a deep venous thrombosis), detached, and traveled through the circulation before becoming trapped in the pulmonary artery.",,,,,,,,
http://purl.obolibrary.org/obo/HP_0002202,Pleural effusion,Fluid around lungs,The presence of an excessive amount of fluid in the pleural cavity.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0032227|SNOMEDCT_US:60046008,,,,,,,,,,,,,,,,,,,,,,,,,Fluid around lungs,,,,HP:0002202,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Pleural effusion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The presence of an excessive amount of fluid in the pleural cavity.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0002206,Pulmonary fibrosis,Pulmonary scarring,Replacement of normal lung tissues by fibroblasts and collagen.,FALSE,,,,,,,,,,,,,,Pulmonary fibrosis leads to an irreversible impairment of alveolar oxygen transfer.,,,,,,,,,,,,,,,,,,UMLS:C0034069|SNOMEDCT_US:51615001,,,,,,,,,,,,,,,,,,,,,,,HP:0006523,,Pulmonary scarring,,,,HP:0002206,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Pulmonary fibrosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Replacement of normal lung tissues by fibroblasts and collagen.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03500024,food-grade enamel-coated surface,,"A surface consisting of a coating that contains a specially prepared vehicle, instead of raw oil. Sometimes referred to as varnish or lacquer.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=N0024,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03500024,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food-grade enamel-coated surface,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A surface consisting of a coating that contains a specially prepared vehicle, instead of raw oil. Sometimes referred to as varnish or lacquer.",,,,,,,,
http://purl.obolibrary.org/obo/PATO_0002182,molecular quality,relational molecular quality,"A quality which inheres in a molecular entity, a single molecule, atom, ion, radical etc.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PATO:0002061,,relational molecular quality,,,,PATO:0002182,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/pato.owl,,,,,,,,,molecular quality,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A quality which inheres in a molecular entity, a single molecule, atom, ion, radical etc.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100258,paramedic role,,A role inhering in a person that is realized when the bearer is a healthcare professional who responds to emergency calls for medical help outside of a hospital.,FALSE,,,,,,,Paramedic,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Paramedic,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100258,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,paramedic role,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A role inhering in a person that is realized when the bearer is a healthcare professional who responds to emergency calls for medical help outside of a hospital.,,,,,,,,
http://purl.obolibrary.org/obo/BTO_0000711,glioma cell line,,"A glioma is a type of tumor that starts in the glial cells of the brain or the spine. Gliomas comprise about 30 per cent of all brain tumors and central nervous system tumors, and 80 per cent of all malignant brain tumors.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,BTO:0000711,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/bto.owl,,,,,,,,,glioma cell line,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A glioma is a type of tumor that starts in the glial cells of the brain or the spine. Gliomas comprise about 30 per cent of all brain tumors and central nervous system tumors, and 80 per cent of all malignant brain tumors.",,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0011,Sub-Saharan African,,"Includes individuals who either self-report or have been described by authors as SubSaharan African or one of the subpopulations from this region (e.g. Yoruban).
This category also includes individuals who genetically cluster with reference populations from this region for example 1000 Genomes and/or HapMap ESN, LWK, GWD, MSL, MKK and YRI populations.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0011,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Sub-Saharan African,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Includes individuals who either self-report or have been described by authors as SubSaharan African or one of the subpopulations from this region (e.g. Yoruban).
This category also includes individuals who genetically cluster with reference populations from this region for example 1000 Genomes and/or HapMap ESN, LWK, GWD, MSL, MKK and YRI populations.",,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0016,African American or Afro-Caribbean ancestry,African American or Afro-Caribbean,"Includes individuals who either self-report or have been described by authors as African American or Afro-Caribbean. This category also includes individuals who genetically cluster with reference populations from this region, for example 1000 Genomes and/or HapMap ACB or ASW populations. We note that there is likely to be significant admixture with European ancestry populations.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,African American or Afro-Caribbean,,,,HANCESTRO:0016,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,African American or Afro-Caribbean ancestry,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Includes individuals who either self-report or have been described by authors as African American or Afro-Caribbean. This category also includes individuals who genetically cluster with reference populations from this region, for example 1000 Genomes and/or HapMap ACB or ASW populations. We note that there is likely to be significant admixture with European ancestry populations.",,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0014,Latin or Admixed American ancestry,Pardo|Mestizo|Latin or Admixed American,"Includes individuals who either self-report or are described by authors as Hispanic, Latino, Latin American or one of the sub-populations from this region. This category includes individuals with known admixture of primarily European, African and Native American ancestries, though some may have also a degree of Asian (e.g. Peru). We also note that the levels of admixture vary depending on the country, with Caribbean countries carrying higher levels of African admixture when compared to South American countries, for example. This category also includes individuals who genetically cluster with reference populations from this region, for example 1000 Genomes and/or HapMap CLM, MXL, PEL and PUR populations",FALSE,,,,,,,,,,,,,,"Synonyms include historical and contemporary terms in use in parts of Canada, Alaska and USA by some Indigenous populations, local and national governmental institutions",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Pardo|Mestizo|Latin or Admixed American,,,,HANCESTRO:0014,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Latin or Admixed American ancestry,,,,,,,,,,,,,,,,,,,,,,,,,,,,Joannella Morales|Jackie MacArthur,,,,"Includes individuals who either self-report or are described by authors as Hispanic, Latino, Latin American or one of the sub-populations from this region. This category includes individuals with known admixture of primarily European, African and Native American ancestries, though some may have also a degree of Asian (e.g. Peru). We also note that the levels of admixture vary depending on the country, with Caribbean countries carrying higher levels of African admixture when compared to South American countries, for example. This category also includes individuals who genetically cluster with reference populations from this region, for example 1000 Genomes and/or HapMap CLM, MXL, PEL and PUR populations",,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0010,African ancestry,African unspecified|African,"Includes individuals that either self-report or have been described as African, but there was not sufficient information to allow classification as African American, AfroCaribbean or Sub-Saharan African.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,African unspecified|African,,,,HANCESTRO:0010,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,African ancestry,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Includes individuals that either self-report or have been described as African, but there was not sufficient information to allow classification as African American, AfroCaribbean or Sub-Saharan African.",,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0013,Indigenous American ancestry,Indigenous American,"Includes indigenous individuals of North, Central and South America, descended from the original human migration into the Americas from Siberia. We note that there does not appear to be a suitable reference population for this category and efforts are required to fill this gap.",FALSE,,,,,,,,,,,,,,"Class previously labelled as ""Native American"". Use of this term, alongside other terms such as ""First Nations"", should be discontinued in favour of the more appropriate ""Indigenous American"", which includes indigenous communities across the Americas while the former serve as political designations in the USA and Canada, respectively.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Indigenous American,,,,HANCESTRO:0013,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Indigenous American ancestry,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Includes indigenous individuals of North, Central and South America, descended from the original human migration into the Americas from Siberia. We note that there does not appear to be a suitable reference population for this category and efforts are required to fill this gap.",,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0018,uncategorised population,,A population for which specific ancestry information is known but that does not fall into any of the defined ancestry categories,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0018,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,uncategorised population,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population for which specific ancestry information is known but that does not fall into any of the defined ancestry categories,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0017,Oceanian ancestry,Oceanian,Includes individuals that either self-report or have been described by authors as Oceanian or one of the sub-populations from this region (e.g. Native Hawaiian). We note that there does not appear to be a suitable reference population for this category and efforts are required to fill this gap.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Oceanian,,,,HANCESTRO:0017,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Oceanian ancestry,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Includes individuals that either self-report or have been described by authors as Oceanian or one of the sub-populations from this region (e.g. Native Hawaiian). We note that there does not appear to be a suitable reference population for this category and efforts are required to fill this gap.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0015,Greater Middle Eastern (Middle Eastern or North African or Persian) ancestry,Middle Eastern/North African|Greater Middle Eastern (Middle Eastern or North African or Persian),"Includes individuals who self-report or were described by authors as Middle Eastern, North African, Persian or one of the subpopulations from this region (e.g. Saudi Arabian). We note there is heterogeneity in this category with different degrees of admixture as well as levels of genetic isolation. We note that there does not appear to be a suitable reference population for this category and efforts are required to fill this gap.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Middle Eastern/North African|Greater Middle Eastern (Middle Eastern or North African or Persian),,,,HANCESTRO:0015,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Greater Middle Eastern (Middle Eastern or North African or Persian) ancestry,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Includes individuals who self-report or were described by authors as Middle Eastern, North African, Persian or one of the subpopulations from this region (e.g. Saudi Arabian). We note there is heterogeneity in this category with different degrees of admixture as well as levels of genetic isolation. We note that there does not appear to be a suitable reference population for this category and efforts are required to fill this gap.",,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0019,Japanese,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0019,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Japanese,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_23503,"4-amino-1,2-oxazolidin-3-one",,A member of the class of oxazolidines that is isoxazoldin-3-one which is substituted at position 4 by an amino group.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:23503,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,"4-amino-1,2-oxazolidin-3-one",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A member of the class of oxazolidines that is isoxazoldin-3-one which is substituted at position 4 by an amino group.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C103180,Data Standard,data standards|Data Standard,"A statement that defines conventions, guidelines, characteristics or methods for consistent data handling to facilitate exchange or processing of the data. This set of criteria are reviewed by and agreed upon by the user community or a governing body before they are released and adopted for use.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,data standards|Data Standard,,,,NCIT:C103180,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Data Standard,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A statement that defines conventions, guidelines, characteristics or methods for consistent data handling to facilitate exchange or processing of the data. This set of criteria are reviewed by and agreed upon by the user community or a governing body before they are released and adopted for use.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000008,beef bottom round roast,,A roast cut from the beef bottom round.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000008,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef bottom round roast,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A roast cut from the beef bottom round.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0002824,surface wipe,,"A sample collection device consisting of a thin, less absorbent sheet, used to collect material from surfaces.",FALSE,,,,,,,,,,,,,,,,,,,,,https://www.science.gov/topicpages/s/surface+wipe+sampling.html,,,,,surface wipe,,"Surface sampling procedures involved the use of polyester wipes, swabs, contact slides (two types), and adhesive tapes; a gelatin filter was used to sample the air.",,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0002824,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,surface wipe,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://orcid.org/0000-0002-8844-9165,,,,"A sample collection device consisting of a thin, less absorbent sheet, used to collect material from surfaces.",,,,,,,,
http://purl.obolibrary.org/obo/APOLLO_SV_00000056,hospital patient population census,,"Motivating use case is to cover Synthia data, and possibly configuration/output of the MRSA simulator in the MIDAS community (CA-MRSA Repast).",FALSE,,,,,,,,,,,,,,"Motivating use case is to cover Synthia data, and possibly configuration/output of the MRSA simulator in the MIDAS community (CA-MRSA Repast).",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,APOLLO_SV:00000056,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/apollo_sv.owl,,,,,,,,,hospital patient population census,,,,,,,,,,,,,,,,,,,,,,,,,,,,Mathias Brochhausen,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000067,unit of molality,,A concentration unit which is a standard measure of the number of moles of a given substance per kilogram of solvent.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:0000067,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,unit of molality,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A concentration unit which is a standard measure of the number of moles of a given substance per kilogram of solvent.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000060,speed/velocity unit,,"A unit which is a standard measure of the rate of movement. Speed is measured in the same physical units of measurement as velocity, but does not contain the element of direction that velocity has. Speed is thus the magnitude component of velocity.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:0000060,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,speed/velocity unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A unit which is a standard measure of the rate of movement. Speed is measured in the same physical units of measurement as velocity, but does not contain the element of direction that velocity has. Speed is thus the magnitude component of velocity.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00003912,teriyaki cooking method,,"A Japanese cooking method in which food is broiled or grilled with a glaze of soy sauce, mirin, and sugar.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00003912,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,teriyaki cooking method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A Japanese cooking method in which food is broiled or grilled with a glaze of soy sauce, mirin, and sugar.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100823,sample temperature value when received,sample temperature value (when received),An environmental data field which describes the numerical value of a measurement of temperature of a sample upon receipt.,FALSE,,,,,,,PCDS:sample_temperature_value_when_received,,,,,,,PCDS: Provide the numerical value of the measured temperature.,,,,,,,,,,,,,,PCDS: 22,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,sample temperature value (when received),sample temperature when received value slot,,,,GENEPIO:0100823,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,sample temperature value when received,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the numerical value of a measurement of temperature of a sample upon receipt.,,PCDS: The numerical value of a measurement of temperature of a sample upon receipt.,,,,,,
http://purl.obolibrary.org/obo/CVDO_0000597,congenital disease,,"A disease existing at birth, or developping during the first month after birth.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CVDO:0000597,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/cvdo.owl,,,,,,,,,congenital disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A disease existing at birth, or developping during the first month after birth.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100085,noncardiogenic pulmonary edema,,"A disease process that results in acute hypoxia secondary to a rapid deterioration in respiratory status.Increased capillary permeability and changes in pressure gradients within the pulmonary capillaries and vasculature are mechanisms for which noncardiogenic pulmonary edema occurs. To differentiate from cardiogenic pulmonary edema, pulmonary capillary wedge pressure is not elevated and remains less than 18 mmHg.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100085,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,noncardiogenic pulmonary edema,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A disease process that results in acute hypoxia secondary to a rapid deterioration in respiratory status.Increased capillary permeability and changes in pressure gradients within the pulmonary capillaries and vasculature are mechanisms for which noncardiogenic pulmonary edema occurs. To differentiate from cardiogenic pulmonary edema, pulmonary capillary wedge pressure is not elevated and remains less than 18 mmHg.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100788,chemical oxygen demand measurement,chemical oxygen demand (COD) measurement value,An environmental data field which describes the amount of oxygen from a specified oxidant required to oxidze a chemical compound or organic material in a sample.,FALSE,,,,,,,PCDS:chemical_oxygen_demand_cod_measurement_value,,,,,,,PCDS: Provide the numerical value of the COD test result.,,,,,,,https://www.iso.org/obp/ui/#iso:std:iso:31800:ed-1:v1:en,,,,,,,PCDS: 26,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,chemical oxygen demand (COD) measurement value,chemical oxygen demand (COD) measurement value slot,,,,GENEPIO:0100788,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,chemical oxygen demand measurement,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the amount of oxygen from a specified oxidant required to oxidze a chemical compound or organic material in a sample.,,PCDS: The measured value from a chemical oxygen demand (COD) test.,,,,,,
http://purl.obolibrary.org/obo/FOODON_03480044,packed in ink,,Squid or octopus ink which is used as a packing medium for food material.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=K0044,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03480044,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,packed in ink,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Squid or octopus ink which is used as a packing medium for food material.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01001222,commercial building,,A building which is primarily used to facilitate the buying or selling of goods or services.,FALSE,,,,,,,,,,,,,,"""Commerce includes legal, economic, political, social, cultural and technological systems that are in operation in any country or internationally.""",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01001222,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,commercial building,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A building which is primarily used to facilitate the buying or selling of goods or services.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C54641,Alpha-2 Country Code,ISO 3166-1 Alpha-2 Country Code|Alpha-2 Country Code,The two-letter country codes specified by the ISO 3166-1 country code standard.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ISO 3166-1 Alpha-2 Country Code|Alpha-2 Country Code,,,,NCIT:C54641,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Alpha-2 Country Code,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The two-letter country codes specified by the ISO 3166-1 country code standard.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_10755,petrositis,,An osteomyelitis that has_material_basis_in infection located_in petrous part of temporal bone.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:10755,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,petrositis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An osteomyelitis that has_material_basis_in infection located_in petrous part of temporal bone.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100937,number of contigs,number of contigs,A data field which describes the number of contigs (contiguous sequences) in a sequence assembly.,FALSE,,,,,,,PCDS:number_of_contigs,,,,,,,PCDS: Provide a numerical value.,,,,,,,,,,,,,,PCDS: 10,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,number of contigs,number of contigs value slot,,,,GENEPIO:0100937,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,number of contigs,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the number of contigs (contiguous sequences) in a sequence assembly.,,PCDS: The number of contigs (contiguous sequences) in a sequence assembly.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001517,data authors,authors,"A data field which describes the names of individuals contributing to the processes of sample collection, sequence generation, analysis, and data submission.",FALSE,,,,,,,PCDS:authors,,,,,,,"PCDS: Include the first and last names of all individuals that should be attributed, separated by a comma.",,,,,,,,,,,,,,PCDS: Tejinder Singh; Fei Hu; Joe Blogs,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,authors,data contributors slot|data contributors fields|data authors slot,,,,GENEPIO:0001517,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-12-22T00:55:53.808Z,,,,,,,,,,,,,,,,,,,data authors,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A data field which describes the names of individuals contributing to the processes of sample collection, sequence generation, analysis, and data submission.",,"PCDS: Names of individuals contributing to the processes of sample collection, sequence generation, analysis, and data submission.",,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000071,sequencing platform (brand),,A sequencing plaform (brand) is a name of a company that produces sequencer equipment.,FALSE,,,,,,,,,,,,,,,,,,,,,GROUP: IRIDA Ontology (Emma),,,,,,,"Illumina (MiSeq, HiSeq), PacBio, Ion Torrent, (Roche 454), SOLiD ABI",,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000071,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,,,,,,,sequencing platform (brand),,,,,Sequencing,,,,,,,,,,,,,,,,,,,,,,Platform,,,https://www.ncbi.nlm.nih.gov/books/NBK54984/table/SRA_Glossary_BK.T._platform_descriptor_t/,,A sequencing plaform (brand) is a name of a company that produces sequencer equipment.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02021805,animal fillet (with skin),,An animal fillet that contains skin.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02021805,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,animal fillet (with skin),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An animal fillet that contains skin.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0001052,rectum,terminal portion of intestine,"The terminal portion of the intestinal tube, terminating with the anus.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:Rectum|XAO:0000238|Wikipedia:Rectum|VHOG:0001751|UMLS:C0034896|SCTID:181261002|NCIT:C12390|MIAA:0000050|MESH:D012007|MAT:0000050|MA:0000336|GAID:311|FMA:14544|EV:0100081|EMAPA:17896|EHDAA:5836|EHDAA2:0001592|EFO:0000848|CALOHA:TS-1180|BTO:0001158|AAO:0010401,,,,,,,,,,,,,,,,,,,,,rectal,,,,terminal portion of intestine,,,,UBERON:0001052,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,rectum,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The terminal portion of the intestinal tube, terminating with the anus.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100108,obsolete: Illumina Genome Analyzer IIx,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,Rehomed in OBI,,,,,,,,,,,,,,,,,,,GENEPIO:0100108,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: Illumina Genome Analyzer IIx,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/OBI_0002000,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100203,acute care facility exposure process,,A process occuring within or in the vicinity of an acute care facility that exposes the recipient organism to a material entity.,FALSE,,,,,,,Acute Care Facility,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100203,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,acute care facility exposure process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A process occuring within or in the vicinity of an acute care facility that exposes the recipient organism to a material entity.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_4511,dicloxacillin,,"A penicillin that is 6-aminopenicillanic acid in which one of the amino hydrogens is replaced by a 3-(2,6-dichlorophenyl)-5-methyl-1,2-oxazol-4-yl]formyl group.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:4511,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,dicloxacillin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A penicillin that is 6-aminopenicillanic acid in which one of the amino hydrogens is replaced by a 3-(2,6-dichlorophenyl)-5-methyl-1,2-oxazol-4-yl]formyl group.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100596,contig number identifier,,A sequence data which specifies a particular contig in a sequence collection.,FALSE,,,,,,,contig ID | contig identifier,,,,,,,,,,,,,,Emma Griffiths,,,,,contig number identifier,,"When a new genome is sequenced, it is constructed from a series of overlapping sequences known as contigs. Each contig receives an identifier code that contains a unique numerical identifier, in addition to project and assembly information, to differentiate an individual contig from others within a squence collection.",,,ready for release,http://purl.obolibrary.org/obo/OBI_0002875,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100596,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,contig number identifier,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-1107-9135,,,https://github.com/obi-ontology/obi/issues/1579,A sequence data which specifies a particular contig in a sequence collection.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0832,Norwegian in Norway (SGDP),Norwegian,A population made up of 1 samples from Norwegian individuals recruited in Norway as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Norwegian,,,,HANCESTRO:0832,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Norwegian in Norway (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 1 samples from Norwegian individuals recruited in Norway as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0835,Polish in Poland (SGDP),Polish,A population made up of 1 samples from Polish individuals recruited in Poland as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Polish,,,,HANCESTRO:0835,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Polish in Poland (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 1 samples from Polish individuals recruited in Poland as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0834,Palestinian in Israel(Central) (SGDP),Palestinian,A population made up of 3 samples from Palestinian individuals recruited in Israel(Central) as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Palestinian,,,,HANCESTRO:0834,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Palestinian in Israel(Central) (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 3 samples from Palestinian individuals recruited in Israel(Central) as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0839,Sardinian in Italy (SGDP),Sardinian,A population made up of 3 samples from Sardinian individuals recruited in Italy as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Sardinian,,,,HANCESTRO:0839,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Sardinian in Italy (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 3 samples from Sardinian individuals recruited in Italy as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0833,Orcadian in Orkney Islands (SGDP),Orcadian,A population made up of 2 samples from Orcadian individuals recruited in Orkney Islands as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Orcadian,,,,HANCESTRO:0833,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Orcadian in Orkney Islands (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Orcadian individuals recruited in Orkney Islands as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0837,Saami in Finland (SGDP),Saami,A population made up of 2 samples from Saami individuals recruited in Finland as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Saami,,,,HANCESTRO:0837,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Saami in Finland (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Saami individuals recruited in Finland as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0838,Samaritan in Israel (SGDP),Samaritan,A population made up of 1 samples from Samaritan individuals recruited in Israel as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Samaritan,,,,HANCESTRO:0838,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Samaritan in Israel (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 1 samples from Samaritan individuals recruited in Israel as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0830,Lezgin in Russia (SGDP),Lezgin,A population made up of 2 samples from Lezgin individuals recruited in Russia as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Lezgin,,,,HANCESTRO:0830,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Lezgin in Russia (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Lezgin individuals recruited in Russia as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0836,Russian in Russia (SGDP),Russian,A population made up of 2 samples from Russian individuals recruited in Russia as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Russian,,,,HANCESTRO:0836,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Russian in Russia (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Russian individuals recruited in Russia as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0831,North Ossetian in Russia (SGDP),North Ossetian,A population made up of 2 samples from North Ossetian individuals recruited in Russia as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,North Ossetian,,,,HANCESTRO:0831,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,North Ossetian in Russia (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from North Ossetian individuals recruited in Russia as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001428,exposure setting,exposure setting,A data field which describes the setting leading to exposure.,FALSE,,,,,,,PCDS:exposure_setting,,,,,,,"PCDS: Select the host exposure setting(s) from the pick list provided in the template. If a desired term is missing, contact the curation team.",,,,,,,,,,,,,,PCDS: Healthcare Setting,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,exposure setting,exposure setting slot,,,,GENEPIO:0001428,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,exposure setting,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the setting leading to exposure.,,PCDS: The setting leading to exposure.,,,,,,
http://purl.obolibrary.org/obo/FOODON_03450016,boiling in large amount of liquid,,Cooked in boiling water at 212 degrees F. Liquid to solid ratio is greater than 2:1.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=G0016,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03450016,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,boiling in large amount of liquid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Cooked in boiling water at 212 degrees F. Liquid to solid ratio is greater than 2:1.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490273,"glass container, uncoloured",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0273,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490273,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"glass container, uncoloured",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C17456,Experimental Model,"Experimental Models, Other|Experimental Model",,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Experimental Models, Other|Experimental Model",,,,NCIT:C17456,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Experimental Model,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_3379134,Pseudomonadati,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,Pseudomonadati,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:3379134,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Pseudomonadati,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_29067,carboxylic acid anion,,The conjugate base formed when the carboxy group of a carboxylic acid is deprotonated.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:58657|CHEBI:23026|CHEBI:13945|CHEBI:13626,,,,,,CHEBI:29067,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,carboxylic acid anion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The conjugate base formed when the carboxy group of a carboxylic acid is deprotonated.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_39447,pyrimidines,,Any compound having a pyrimidine as part of its structure.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:26448|CHEBI:13681,,,,,,CHEBI:39447,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,pyrimidines,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any compound having a pyrimidine as part of its structure.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0001866,secondary cultured cell,,A cultured cell that has been passaged or derives from a cell that has been passaged in culture. ,FALSE,,,,,,,,,,,,,,A secondary cultured cell has been passaged in culture or is a descendant of such a cell that is derived through propagation in culture.,,,,,,,PERSON: Matthew Brush,,,,,secondary cultured cell,,,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0001866,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/clo.owl,,,,,,,,,secondary cultured cell,,,,,,,,,,,,,,,,,,,,,,,,,,,,Person: Matthew Brush,,,,A cultured cell that has been passaged or derives from a cell that has been passaged in culture. ,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000061,AccuProbe Listeria monocytogenes culture identification reagent kit,,An AccuProbe reagent kit for identifying Listeria monocytogenes.,FALSE,,,,,,,,,,,,,,,,,,,,,URI: http://www.hologic.com/sites/default/files/package%20inserts/103051F-EN-RevC.pdf,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000061,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,,,,,,,AccuProbe Listeria monocytogenes culture identification reagent kit,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,An AccuProbe reagent kit for identifying Listeria monocytogenes.,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000573,Birwa,,A Southern African population with a population size of 35500,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000573,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Birwa,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Southern African population with a population size of 35500,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000574,Kissi,,"A Western African population with a population size of 1,224,545",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000574,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Kissi,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A Western African population with a population size of 1,224,545",,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000576,Maore,,"A Swahili population with a population size of 217,400",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000576,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Maore,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A Swahili population with a population size of 217,400",,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000572,Ewondo,,A Beti-Pahuin population with a population size of 2500000,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000572,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Ewondo,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Beti-Pahuin population with a population size of 2500000,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000577,Mwali,,"A Swahili population with a population size of 45,000",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000577,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Mwali,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A Swahili population with a population size of 45,000",,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000579,Kuria,,A Bantu Eastern population with a population size of 1 million,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000579,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Kuria,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Bantu Eastern population with a population size of 1 million,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000571,Kango,,A Pygmy Central population with a population size of 12500,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000571,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Kango,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Pygmy Central population with a population size of 12500,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000575,Ngazidja,,"A Swahili population with a population size of 416,200",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000575,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Ngazidja,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A Swahili population with a population size of 416,200",,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000578,Ndzwani,,"A Swahili population with a population size of 365,900",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000578,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Ndzwani,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A Swahili population with a population size of 365,900",,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01001480,domestic building,,A building which is primarily used for the long-term habitation of humans.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01001480,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,domestic building,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A building which is primarily used for the long-term habitation of humans.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002113,time value specification,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/UO_0000003,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002113,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,time value specification,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C49236,Therapeutic Procedure,treatment_or_therapy|treatment or therapy|treatment|therapy|any_therapy|any therapy|Treatment|Therapy|Therapeutic Technique|Therapeutic Procedure|Therapeutic Method|Therapeutic Interventions|Therapeutic|TX|TREAT,"Medical care intended to treat or cure a condition or lessen its symptoms. This includes the administration of drugs, surgical procedures, physical or psychotherapy, or the use of therapeutic devices.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,treatment_or_therapy|treatment or therapy|treatment|therapy|any_therapy|any therapy|Treatment|Therapy|Therapeutic Technique|Therapeutic Procedure|Therapeutic Method|Therapeutic Interventions|Therapeutic|TX|TREAT,,,,NCIT:C49236,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Therapeutic Procedure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Medical care intended to treat or cure a condition or lessen its symptoms. This includes the administration of drugs, surgical procedures, physical or psychotherapy, or the use of therapeutic devices.",,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000498,Aweer,,A Cushitic Eastern population with a population size of 20103,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000498,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Aweer|Aweer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Cushitic Eastern population with a population size of 20103,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000491,Segeju,,"A Mijikenda population with a population size of <25,000",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000491,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Segeju|Segeju,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A Mijikenda population with a population size of <25,000",,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000495,Ndau,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000495,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Ndau|Ndau,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000497,Tharaka,,A Bantu Eastern population with a population size of 175905,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000497,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Tharaka|Tharaka,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Bantu Eastern population with a population size of 175905,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000496,Sukuma,,A Bantu Eastern population with a population size of 10 Millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000496,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Sukuma|Sukuma,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Bantu Eastern population with a population size of 10 Millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000494,Pokomo,,A Bantu Eastern population with a population size of 112075,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000494,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Pokomo|Pokomo,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Bantu Eastern population with a population size of 112075,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000490,Masaba,,A Bantu Eastern population with a population size of 2.233 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000490,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Masaba|Masaba,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Bantu Eastern population with a population size of 2.233 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000493,Nyamwezi,,A Bantu Eastern population with a population size of 4 Millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000493,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Nyamwezi|Nyamwezi,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Bantu Eastern population with a population size of 4 Millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000492,Nkole,,"A Bantu Eastern population with a population size of 4,436 Millions",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000492,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Nkole|Nkole,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A Bantu Eastern population with a population size of 4,436 Millions",,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000499,Elmolo,,A Cushitic Eastern population with a population size of 1104,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000499,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Elmolo|Elmolo,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Cushitic Eastern population with a population size of 1104,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03440023,"heat-treated, multiple components, different degrees of treatment",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=F0023,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03440023,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"heat-treated, multiple components, different degrees of treatment",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00005137,"populated place, Serbia",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00005137,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Serbia",http://purl.obolibrary.org/obo/GAZ_00002957,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00005139,Autonomous Province (Serbia),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00005139,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Autonomous Province (Serbia),http://purl.obolibrary.org/obo/GAZ_00002957,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_1055535,Escherichia coli O111,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,Escherichia coli O111,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:1055535,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Escherichia coli O111,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0013703,integumentary projection,skin projection,Anatomical projection that is part of the integumentl system.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,skin projection,,,UBERON:0013703,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,integumentary projection,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Anatomical projection that is part of the integumentl system.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00005382,lamb shoulder square cut,,A shoulder cut where the foreshank and brisket are removed by a square-cut approximately perpendicular to the rib side,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00005382,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lamb shoulder square cut,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A shoulder cut where the foreshank and brisket are removed by a square-cut approximately perpendicular to the rib side,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000019,obsolete: intersex,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,NCBI BioSample: intersex,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000019,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: intersex,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/NCIT_C45908,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002033,agency provided consent,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002033,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,agency provided consent,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020495,turkey breast (skinless),,A skinless turkey breast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020495,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,turkey breast (skinless),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A skinless turkey breast.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510019,cattle as consumer,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0019,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510019,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,cattle as consumer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HP_0033628,Bowel irritability,,Intermittent abdominal pain with diarrhea and/or constipation.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0033628,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Bowel irritability,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Intermittent abdominal pain with diarrhea and/or constipation.,,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000090,dichotomous variable,,a dichotomous variable  is a categorical variable  which is defined to have only 2 categories or possible values,FALSE,,,,,,,,,,,,,,"'has part' exactly 1 ('categorical measurement datum'
 and ('has category label' exactly 2 'categorical label'))",,,,,,,http://udel.edu/~mcdonald/statvartypes.html|AGB-PRS,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000090,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,dichotomous variable,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra|Alejandra Gonzalez-Beltran|Orlaith Burke,,,,a dichotomous variable  is a categorical variable  which is defined to have only 2 categories or possible values,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490234,polyethylene plug,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0234,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490234,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,polyethylene plug,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_25362,elemental molecule,,A molecule all atoms of which have the same atomic number.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:25362,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,elemental molecule,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A molecule all atoms of which have the same atomic number.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0000465,material anatomical entity,,Anatomical entity that has mass.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,VHOG:0001721|TGMA:0001826|TAO:0001836|HAO:0000006|FMA:67165|FBbt:00007016|EHDAA2:0003006|CARO:0000006|BILA:0000006|AEO:0000006|AAO:0010264,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0000465,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl|http://purl.obolibrary.org/obo/foodon.owl|http://purl.obolibrary.org/obo/cob.owl,,,,,,,,,material anatomical entity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Anatomical entity that has mass.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0000467,anatomical system,system,"Multicellular, connected anatomical structure that has multiple organs as parts and whose parts work together to achieve some shared function.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:AnatomicalSystem|ZFA:0001439|XAO:0003002|Wikipedia:Organ_system|WBbt:0005763|WBbt:0005746|VHOG:0001725|UMLS:C0460002|TGMA:0001831|TAO:0001439|SCTID:278195005|NCIT:C12919|MA:0000003|IDOMAL:0002460|HAO:0000011|FMA:7149|FBbt:00004856|EV:0100000|EMAPA:16103|EHDAA:392|EHDAA2:0003011|CARO:0000011|CALOHA:TS-2088|BSA:0000049|BIRNLEX:14|BILA:0000011|AEO:0000011|AAO:0000007,,,,,,,,,,,,,,,,,,,,,,,,system,organ system|connected anatomical system|body system,,,,UBERON:0000467,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,anatomical system,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Multicellular, connected anatomical structure that has multiple organs as parts and whose parts work together to achieve some shared function.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0000463,organism substance,portion of organism substance|portion of body substance|organism substance|body substance|body fluid or substance,"Material anatomical entity in a gaseous, liquid, semisolid or solid state; produced by anatomical structures or derived from inhaled and ingested substances that have been modified by anatomical structures as they pass through the body.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:BodySubstance|ZFA:0001487|XAO:0004001|VHOG:0001726|TGMA:0001824|TAO:0001487|SPD:0000008|NCIT:C13236|MA:0002450|HAO:0000004|FMA:9669|FBbt:00007019|EMAPA:35178|EHDAA2:0003004|CARO:0000004|CALOHA:TS-2101|BILA:0000004|AEO:0000004|AAO:0010839,,,,,,,,,,,,,,,,,,,,,,,,,portion of organism substance|portion of body substance|organism substance|body substance|body fluid or substance,,,,UBERON:0000463,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl|http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,organism substance,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/COB_0000022,,,,,,,,,,,,"Material anatomical entity in a gaseous, liquid, semisolid or solid state; produced by anatomical structures or derived from inhaled and ingested substances that have been modified by anatomical structures as they pass through the body.",,,,organism body product,,,,
http://purl.obolibrary.org/obo/UBERON_0000466,immaterial anatomical entity,immaterial physical anatomical entity,Anatomical entity that has no mass.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,VHOG:0001727|TGMA:0001827|TAO:0001835|HAO:0000007|FMA:67112|FBbt:00007015|EHDAA2:0003007|CARO:0000007|BILA:0000007|AEO:0000007|AAO:0010265,,,,,,,,,,,,,,,,,,,,,,,,,immaterial physical anatomical entity,,,,UBERON:0000466,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl|http://purl.obolibrary.org/obo/cob.owl,,,,,,,,,immaterial anatomical entity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Anatomical entity that has no mass.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0000468,multicellular organism,organism,Anatomical structure that is an individual member of a species and consists of more than one cell.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ncithesaurus:Whole_Organism|galen:Organism|ZFA:0001094|XAO:0003004|Wikipedia:Multi-cellular_organism|WBbt:0007833|VHOG:0000671|TGMA:0001832|TAO:0001094|TADS:0000001|SCTID:243928005|NCIT:C13041|HAO:0000012|FMA:256135|FBbt:00000001|EV:0100016|EMAPA:25765|EHDAA:1|EHDAA2:0003191|EHDAA2:0003103|EFO:0002906|CARO:0000012|BTO:0000042|BSA:0000038|BIRNLEX:18|BILA:0000012|AEO:0000191|AAO:0010026,,,,,,,,,,,,,,,,,,,,,,,,organism,multi-cellular organism,,,,UBERON:0000468,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl|http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,multicellular organism,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Anatomical structure that is an individual member of a species and consists of more than one cell.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0000464,anatomical space,space|lumen,"Non-material anatomical entity of three dimensions, that is generated by morphogenetic or other physiologic processes; is surrounded by one or more anatomical structures; contains one or more organism substances or anatomical structures.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ZFA:0001643|XAO:0003190|VHOG:0001728|UMLS:C0524461|TGMA:0001825|TAO:0001668|NCIT:C94478|HAO:0000005|FMA:5897|FBbt:00007017|EHDAA2:0003005|CARO:0000005|BILA:0000005|AEO:0000005|AAO:0010110,,,,,,,,,,,,,,,,,,,,,,,,space|lumen,lumen space,,,,UBERON:0000464,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,anatomical space,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Non-material anatomical entity of three dimensions, that is generated by morphogenetic or other physiologic processes; is surrounded by one or more anatomical structures; contains one or more organism substances or anatomical structures.",,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0003847,hereditary disease,Mendelian disease,A disease that is caused by genetic modifications where those modifications are inherited from a parent's genome.,FALSE,,,,,,,,,,,,,,"Usage note: this is intended only for diseases with an inherited genetic etiology. Somatic genetic mutations are excluded. Some ontologies use the term 'genetic disease' in the sense of inherited disorders only, we are here careful to distinguish.",,,,,,,,,,,,,,,,,,UMLS:C0019247|SCTID:32895009|NCIT:C3101|MESH:D030342|MEDGEN:5527|ICD9:799.89|EFO:0000508|DOID:630,,,,,,,,,,,,,,,,,,,,,,,,genetic disorder|genetic disease|genetic condition,molecular disease|inherited genetic disease|inherited disease|hereditary diseases|hereditary disease or disorder|hereditary disease,Mendelian disease,,,MONDO:0003847,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#rare_grouping|http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar|http://purl.oboInOwllibrary.org/oboInOwl/mondo#harrisons_view,,,,,,,,hereditary disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A disease that is caused by genetic modifications where those modifications are inherited from a parent's genome.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03411564,obsolete: organism by alternate grouping,,"This is a hierarchy of organisms, grouped minimally in a combination of taxonomy and consumer-oriented food groups.",TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03411564,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,obsolete: organism by alternate grouping,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/FOODON_03420116,,,"This is a hierarchy of organisms, grouped minimally in a combination of taxonomy and consumer-oriented food groups.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001945,CF-S method,,Cot-filtered single/low-copy genomic DNA,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI SRA: CF-S,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001945,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CF-S method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Cot-filtered single/low-copy genomic DNA,,,,,,,,
http://purl.obolibrary.org/obo/HP_0011470,Nasogastric tube feeding in infancy,,Feeding problem necessitating nasogastric tube feeding.,FALSE,,,,,,,,,,,,,,This is a severe form of feeding problems in infancy.,,,,,,,,,,,,,,,,,,UMLS:C4023343,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0011470,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Nasogastric tube feeding in infancy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Feeding problem necessitating nasogastric tube feeding.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0011471,Gastrostomy tube feeding in infancy,,Feeding problem necessitating gastrostomy tube feeding.,FALSE,,,,,,,,,,,,,,This is an extremely severe form of feeding problems in infancy.,,,,,,,,,,,,,,,,,,UMLS:C4023342|UMLS:C4020748,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0011471,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Gastrostomy tube feeding in infancy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Feeding problem necessitating gastrostomy tube feeding.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_03501197,institutional building,,A building which is used by an organization which serves a long-established role in human society.,FALSE,,,,,,,,,,,,,,This term needs further consideration and development as semantics of institution are ambiguous at scale - e.g. are hotels institutional buildings?,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:03501197,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,institutional building,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A building which is used by an organization which serves a long-established role in human society.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00005109,Province (Zimbabwe),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00005109,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Province (Zimbabwe),http://purl.obolibrary.org/obo/GAZ_00001106,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00005100,"populated place, Republic of Congo",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00005100,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Republic of Congo",http://purl.obolibrary.org/obo/GAZ_00001088,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C3959,Hepatobiliary Disorder,Liver and Biliary System Disorder|Liver and Biliary Disorder|Liver and Biliary Disease|Liver Disease|Hepatobiliary Disorder,"A non-neoplastic or neoplastic disorder that affects the liver, bile ducts, and gallbladder. Representative examples of non-neoplastic disorders include hepatitis, cirrhosis, cholangitis, and cholecystitis. Representative examples of neoplastic disorders include hepatocellular adenoma, hepatocellular carcinoma, and cholangiocarcinoma.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Liver and Biliary System Disorder|Liver and Biliary Disorder|Liver and Biliary Disease|Liver Disease|Hepatobiliary Disorder,,,,NCIT:C3959,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Hepatobiliary Disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A non-neoplastic or neoplastic disorder that affects the liver, bile ducts, and gallbladder. Representative examples of non-neoplastic disorders include hepatitis, cirrhosis, cholangitis, and cholecystitis. Representative examples of neoplastic disorders include hepatocellular adenoma, hepatocellular carcinoma, and cholangiocarcinoma.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0011216,organ system subdivision,,A subdivision of an anatomical system.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SCTID:91690000|FMA:67509|FBbt:00007330,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0011216,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,organ system subdivision,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A subdivision of an anatomical system.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0002024,SOLiD 4 System,,"An AB SOLid System which is manufacted by the Applied Biosystems corporation. Built upon SOLiD sequencing technology, the machine generates greater than 1 billion mappable reads per run.",FALSE,,,,,,,SOLiD 4|Applied Biosystems SOLiD 4 System,,,,,,,,,,,,,,http://www.appliedbiosystems.com/absite/us/en/home/applications-technologies/solid-next-generation-sequencing/next-generation-systems/solid-4-system.html?CID=FL-091411_solid4,,,,,SOLiD 4 System,,,,,http://purl.obolibrary.org/obo/IAO_0000120,NCBI SRA: AB SOLiD 4 System,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0002024,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SOLiD 4 System,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Person: Venkat Malladi, Chris Stoeckert, Jie Zheng",,,,"An AB SOLid System which is manufacted by the Applied Biosystems corporation. Built upon SOLiD sequencing technology, the machine generates greater than 1 billion mappable reads per run.",,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000934,restaurant,eatery,A building within which food and drink are prepared and served to customers in exchange for money or other goods and/or services.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,eatery,,,,ENVO:01000934,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,restaurant,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A building within which food and drink are prepared and served to customers in exchange for money or other goods and/or services.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020060,piece of avian animal,,A severed part of an avian animal.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020060,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of avian animal,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A severed part of an avian animal.,,,,,,,,
http://purl.obolibrary.org/obo/IAO_0000314,document part,,An information content entity that is part of a document.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,document part,,,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,IAO:0000314,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/iao.owl,,,,,,,,,document part,,,,,,,,,,,,,,,,,,,,,,,,,,,,PERSON: Lawrence Hunter,,,,An information content entity that is part of a document.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000272,lamb rib,,A lamb primal cut that is between the shoulder and loin.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000272,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lamb rib,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A lamb primal cut that is between the shoulder and loin.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100241,religious gathering exposure datum,,A type of social behavior in which a collection of humans intentionally gathers together on a temporary basis to engage in a religious activity.,FALSE,,,,,,,Religious Gathering,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100241,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,religious gathering exposure datum,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A type of social behavior in which a collection of humans intentionally gathers together on a temporary basis to engage in a religious activity.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C84327,Freezer,Freezer,A refrigerated cabinet or room for preserving materials at or below 32F (0C).,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Freezer,,,,NCIT:C84327,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Freezer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A refrigerated cabinet or room for preserving materials at or below 32F (0C).,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020280,"piece of chicken breast (skinless, boneless, raw)",,A raw piece of skinless and boneless chicken breast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020280,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"piece of chicken breast (skinless, boneless, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw piece of skinless and boneless chicken breast.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0001893,organization of specimen collector,,An organization that is the affiliation of the person collecting the specimen,FALSE,,,,,,,,,,,,,,,,,,,,,NIAID GSCID-BRC metadata working group,,,,,organization of specimen collector,,,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0001893,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,organization of specimen collector,,,,,,,Specimen Collector's Institution,,,,,,,,,,,,,,,,,,,,,"PERSON: Chris Stoeckert, Jie Zheng",,,,An organization that is the affiliation of the person collecting the specimen,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100139,Ion Torrent S5,,A DNA sequencer manufactured by the Ion Torrent corporation which utilizes Ion semiconductor sequencing and requires only a small amount of input material.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100139,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,Ion Torrent S5,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A DNA sequencer manufactured by the Ion Torrent corporation which utilizes Ion semiconductor sequencing and requires only a small amount of input material.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0022293,reproductive gland secretion,,A portion of organism substance that is secreted by a reproductive gland.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0022293,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,reproductive gland secretion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A portion of organism substance that is secreted by a reproductive gland.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102271,prior measles infection date,,A prior infection data field which describes the date of diagnosis of the prior Measles infection.,FALSE,,,,,,,PCDS:prior_measles_infection_date,,,,,,,PCDS: Provide the date that the most recent prior infection was diagnosed. Provide the prior Measles infection date in ISO 8601 standard format 'YYYY-MM-DD'.,,,,,,,,,,,,,,PCDS: 2021-01-23,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102271,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2026-04-09T18:02:29.914Z,,,,,,,,,,,,,,,,,,,prior measles infection date,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A prior infection data field which describes the date of diagnosis of the prior Measles infection.,,PCDS: The date of diagnosis of the prior Measles infection.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100847,artic-v1 strategy,,An amplicon strategy which was developed by the ARTIC consortium for SARS-CoV-2 with the attributes of version 1.0.0.,FALSE,,,,,,,artic-v1|artic v1,,,,,,,,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100847,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2026-04-13T19:52:38.515Z,,,,,,,,,,,,,,,,,,,artic-v1 strategy,,,,,,,,,,,,,,,,,,,,,,https://www.protocols.io/view/ncov-2019-sequencing-protocol-bp2l6n26rgqe/v1,,,,,,,,,,An amplicon strategy which was developed by the ARTIC consortium for SARS-CoV-2 with the attributes of version 1.0.0.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001898,phone type - mobile,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001898,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,phone type - mobile,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,mobile,,,,
http://purl.obolibrary.org/obo/FOODON_03510156,low sodium claim,,Foods having 140 milligrams or less sodium per amount customarily consumed (and per 50 grams of food if the amount customarily consumed is small). Meals and main dishes have 140 milligrams sodium per 100 grams of food.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0156,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510156,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,low sodium claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Foods having 140 milligrams or less sodium per amount customarily consumed (and per 50 grams of food if the amount customarily consumed is small). Meals and main dishes have 140 milligrams sodium per 100 grams of food.,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_10091,Mus musculus castaneus,,,FALSE,,,,,,,southeastern Asian house mouse,,,,,,,,,,,,,,,,,,,Mus musculus castaneus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:10091,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Mus musculus castaneus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001239,obsolete: NCBI BioSample attribute package,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001239,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: NCBI BioSample attribute package,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0000113,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100630,host geographical location field,host geo_loc,A data field which describes the geographical location of a host organism.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,(2026-02-28) Under review for deprecation.,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,host geo_loc,host geographical location slot,,,,GENEPIO:0100630,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788,2022-12-22T00:55:53.808Z,,,,,,,,,,,,,,,,,,,host geographical location field,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the geographical location of a host organism.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510152,sodium free claim,,"Food having less than 5 miligrams sodium per amount customarily consumed (or for meals and main dishes, less than 5 milligrams sodium per labeled serving). Such food must contain no ingredient that is sodium chloride or generally understood to contain sodium except where the ingredient listed is footnoted '*adds a trivial amount of sodium'.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0152,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510152,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,sodium free claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Food having less than 5 miligrams sodium per amount customarily consumed (or for meals and main dishes, less than 5 milligrams sodium per labeled serving). Such food must contain no ingredient that is sodium chloride or generally understood to contain sodium except where the ingredient listed is footnoted '*adds a trivial amount of sodium'.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002127,vaccum device,,A device which generates a vacuum to provide suction of material.,FALSE,,,,,,,,,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002127,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,vaccum device,,,,,,,,,,,,,,,,,,,,,,,,,,,,Emma Griffiths,,,,A device which generates a vacuum to provide suction of material.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0060570,cardiac tuberculosis,,A tuberculosis located in the heart.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0060570,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,cardiac tuberculosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A tuberculosis located in the heart.,,,,,,,,
http://purl.obolibrary.org/obo/BTO_0002022,bronchial epithelial cell line,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,BTO:0002022,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/bto.owl,,,,,,,,,bronchial epithelial cell line,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HP_0000464,Abnormality of the neck,Malformation of the neck|Deformity of the neck,An abnormality of the neck.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4280628|UMLS:C0575167|UMLS:C0266623|SNOMEDCT_US:40052002|SNOMEDCT_US:298390003,,,,,,,,,,,,,,,,,,,,,,,,,Anomaly of the neck|Abnormality of the neck,Malformation of the neck|Deformity of the neck,,,HP:0000464,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,http://purl.oboInOwllibrary.org/oboInOwl/hp#hposlim_core,,,,,,,,Abnormality of the neck,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An abnormality of the neck.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490412,asbestos container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0412,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490412,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,asbestos container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01001110,ecosystem,,An environmental system which includes both living and non-living components.,FALSE,,,,,,,,,,,,,,"This class will be primarily filled by inference, any environmental system which necessarily includes living parts should be autoclassified here.",,,,,,,,,,,,,,,,,,LTER:173,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01001110,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,ecosystem,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental system which includes both living and non-living components.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100865,varskip-vsl1a strategy,VarSkip Long 1a,An amplicon strategy which targets SARS-CoV-2 and was developed by New England BioLabs using PrimalSeq to reduce effects of variants with the attributes of version 1a long.,FALSE,,,,,,,varskip-vsl1a|varskip vsl1a,,,,,,,,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,VarSkip Long 1a,,,,GENEPIO:0100865,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2026-04-13T19:52:38.515Z,,,,,,,,,,,,,,,,,,,varskip-vsl1a strategy,,,,,,,,,,,,,,,,,,,,,,https://github.com/nebiolabs/VarSkip,,,,,,,,,,An amplicon strategy which targets SARS-CoV-2 and was developed by New England BioLabs using PrimalSeq to reduce effects of variants with the attributes of version 1a long.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510087,reduced salt claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0087,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510087,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,reduced salt claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001067,business activity,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001067,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,business activity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001030,obsolete: party,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001030,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: party,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/PCO_0000035,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0002107,liver,,"An exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes[GO].",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:Liver|ZFA:0000123|XAO:0000133|Wikipedia:Liver|VHOG:0000257|UMLS:C0023884|TAO:0000123|SCTID:181268008|NCIT:C12392|MIAA:0000097|MESH:D008099|MAT:0000097|MA:0000358|GAID:288|FMA:7197|EV:0100089|EMAPA:16846|EHDAA:2197|EHDAA2:0000997|EFO:0000887|CALOHA:TS-0564|BTO:0000759|AAO:0010111,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0002107,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,liver,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes[GO].",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0002106,spleen,,The organ that functions to filter blood and to store red corpuscles and platelets.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:Spleen|ZFA:0000436|XAO:0000328|Wikipedia:Spleen|VHOG:0000120|UMLS:C0037993|TAO:0000436|SCTID:181279003|NCIT:C12432|MIAA:0000085|MESH:D013154|MAT:0000085|MA:0000141|GAID:1289|FMA:7196|EV:0100055|EMAPA:18767|EFO:0000869|CALOHA:TS-0956|BTO:0001281|AAO:0010395,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0002106,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,spleen,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The organ that functions to filter blood and to store red corpuscles and platelets.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0002109,pair of nares,pair of nostrils|nostrils|nares set,Pair of nostrils.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Nares|FMA:72005,,,,,,,,,,,,,,,,,,,,,,,,,pair of nostrils|nostrils|nares set,,,,UBERON:0002109,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,pair of nares,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Pair of nostrils.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0002108,small intestine,small intestine|small bowel,"Subdivision of digestive tract that connects the stomach to the large intestine and is where much of the digestion and absorption of food takes place (with the exception of ruminants). The mammalian small intestine is long and coiled and can be differentiated histologically into: duodenum, jejunem, ileum[WP,cjm,Kardong].",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:SmallIntestine|ZFA:0001323|XAO:0000130|Wikipedia:Small_intestine|VHOG:0000055|UMLS:C0021852|TAO:0001323|SCTID:181250005|NCIT:C12386|MIAA:0000047|MESH:D007421|MAT:0000047|MA:0000337|GAID:313|FMA:7200|EV:0100072|EMAPA:32834|EFO:0000841|CALOHA:TS-0942|BTO:0000651|AAO:0010397,,,,,,,,,,,,,,,,,,,,,,,,,small intestine|small bowel,,,,UBERON:0002108,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,small intestine,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Subdivision of digestive tract that connects the stomach to the large intestine and is where much of the digestion and absorption of food takes place (with the exception of ruminants). The mammalian small intestine is long and coiled and can be differentiated histologically into: duodenum, jejunem, ileum[WP,cjm,Kardong].",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100053,subject age at time of specimen collection bin (40 - 49),,An age group that stratifies the age of a case to be between 40 to 49 years old (inclusive).,FALSE,,,,,,,40 - 49,,,,,,,,,,,,,,,,,,,,,,,,ready for release,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100053,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,subject age at time of specimen collection bin (40 - 49),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An age group that stratifies the age of a case to be between 40 to 49 years old (inclusive).,,,,,,,,
http://purl.obolibrary.org/obo/HP_0001350,Slurred speech,Slurred speech,Abnormal coordination of muscles involved in speech.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0234518|SNOMEDCT_US:289195008,,,,,,,,,,,,,,,,,,,,,,,,,Slurred speech,,,,HP:0001350,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Slurred speech,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Abnormal coordination of muscles involved in speech.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490197,"bag, sack or pouch",,"According to FSTA Thesaurus Packaging 3.1 package types, includes boil-in bag, carrier bag, flat bag, inner bag, retort pouch, shipping bag, valve bag, and valve sack",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0197,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490197,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"bag, sack or pouch",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"According to FSTA Thesaurus Packaging 3.1 package types, includes boil-in bag, carrier bag, flat bag, inner bag, retort pouch, shipping bag, valve bag, and valve sack",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03500013,carbonated beverage can enamel surface,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=N0013,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03500013,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,carbonated beverage can enamel surface,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102281,GenapSys sequencing instrument model,,"A DNA sequencer manufactured by GenapSys which uses sequencing-by-synthesis chemistry and employs electrical-based detection of single nucleotide incorporations. Has CMOS-based detectors, simple fluidics, and no moving parts.",FALSE,,,,,,,sequencing instrument model,,,,,,,,,,,,,,https://www.prayogalifesciences.com/genapsys-sequencer-new/,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102281,,,,,,,,,,,,,https://orcid.org/0000-0002-7654-6902|https://orcid.org/0000-0001-8008-8249,2026-03-30T14:26:04.627Z,,,,,,,,,,,,,,,,,,,GenapSys sequencing instrument model,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A DNA sequencer manufactured by GenapSys which uses sequencing-by-synthesis chemistry and employs electrical-based detection of single nucleotide incorporations. Has CMOS-based detectors, simple fluidics, and no moving parts.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0039163,lateral sacral lymph node,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:84597,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0039163,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,lateral sacral lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0039164,medial sacral lymph node,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:84598,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0039164,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,medial sacral lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0039168,colic lymph node,pericolonic lymph node|pericolic lymph node|colic node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SCTID:281593008|FMA:16612,,,,,,,,,,,,,,,,,,,,,,,,,pericolonic lymph node|pericolic lymph node|colic node,,,,UBERON:0039168,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,colic lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0039162,inferior ileocolic lymph node,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:78731,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0039162,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,inferior ileocolic lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0039167,bronchopulmonary lymph node,station 10 lymph node|station 10 N1 lymph node|hilar lymph node|bronchopulmonary node|10 R+L thoracic,A tracheobronchial lymph node situated in the hilum of a lung.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:5965,,,,,,,,,,,,,,,,,,,,,,,,,station 10 lymph node|station 10 N1 lymph node|hilar lymph node|bronchopulmonary node|10 R+L thoracic,,,,UBERON:0039167,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,bronchopulmonary lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A tracheobronchial lymph node situated in the hilum of a lung.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000352,field,,An unbroken expanse (as of ice),FALSE,,,,,,,,,,,,,,"This class was created to accommodate ""fields"" from agricultural fields to marine mesoscale eddy fields. Thus, it has a very broad definition which makes it less than informative when annotating. Please consider using or requesting an appropriate subclass.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01000352,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,envoPolar,,,,,,,,field,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An unbroken expanse (as of ice),,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C159659,Transplant Recipient,Transplantation Recipient|Transplant Recipient,An individual receiving a transplant.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Transplantation Recipient|Transplant Recipient,,,,NCIT:C159659,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Transplant Recipient,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An individual receiving a transplant.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0000822,Hypertension,Systemic hypertension|Arterial hypertension,The presence of chronic increased pressure in the systemic arterial system.,FALSE,,,,,,,,,,,,,,"Hypertension is sustained elevation of resting systolic BP (140 mm Hg or higher), diastolic BP (90 mm Hg or higher), or both.",,,,,,,,,,,,,,,,,,UMLS:C0497247|UMLS:C0020538|SNOMEDCT_US:38341003|SNOMEDCT_US:24184005,,,,,,,,,,,,,,,,,,,,,,,HP:0005126|HP:0004949,,Systemic hypertension|Arterial hypertension,,,,HP:0000822,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Hypertension,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The presence of chronic increased pressure in the systemic arterial system.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C27992,Disease Qualifier,Disease Qualifier,An adjectival term used to specify and describe a disease appearance or processes.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Disease Qualifier,,,,NCIT:C27992,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Disease Qualifier,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An adjectival term used to specify and describe a disease appearance or processes.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001189,sampling location name city,geographical location city name|geo_loc name (city),A data field which describes the city of origin of the sample.,FALSE,,,,,,,PCDS:geo_loc_name_city,,,,,,,PCDS: Provide the city name. Use this look-up service to identify the standardized term: https://www.ebi.ac.uk/ols/ontologies/gaz,,,,,,,,,,,,,,PCDS: Vancouver,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,geographical location city name|geo_loc name (city),sample collection location name city,,,,GENEPIO:0001189,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,sampling location name city,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the city of origin of the sample.,,PCDS: The city of origin of the sample.,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000475,inlet,,"An opening of the sea into the land, or of a lake into its shore.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,TGN:21128|SWEETRealm:Inlet|Geonames:H.INLT|Geonames:H.GULF|FTT:463|FTT:233|EcoLexicon:inlet,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00000475,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,envoPolar,,,,,,,,inlet,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An opening of the sea into the land, or of a lake into its shore.",,,,,,,,
http://purl.obolibrary.org/obo/BTO_0000003,intestinal cell line,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,BTO:0000003,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/bto.owl,,,,,,,,,intestinal cell line,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000147,NCBI SRA meta information standard,,An NCBI SRA meta information item is a field specification for a NCBI Sequence Read Archive record.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000147,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI SRA meta information standard,,,,,,,,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/books/NBK47529/#_SRA_Quick_Sub_BK_Experiment_,,,,,,Damion Dooley,,,,An NCBI SRA meta information item is a field specification for a NCBI Sequence Read Archive record.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03310611,poultry (whole or pieces),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://bioregistry.io/reference/siren:F10611,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03310611,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,poultry (whole or pieces),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0002491,substance abuse,,The use of a drug for a reason other than which it was intended or in a manner or in quantities other than directed.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0740858|SCTID:66214007|MEDGEN:152849|ICD9:305.90|DOID:302,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MONDO:0002491,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,substance abuse,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The use of a drug for a reason other than which it was intended or in a manner or in quantities other than directed.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100251,resident role,,A role inhering in a person that is realized when the bearer maintains residency in a given place.,FALSE,,,,,,,Resident,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Resident,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100251,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,resident role,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A role inhering in a person that is realized when the bearer maintains residency in a given place.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001058,human exposure event - travel datum,,"An epidemiology travel datum is a datum regarding a particular human's travel trip destination, mode, and motivation, with respect to an epidemiology investigation.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001058,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,human exposure event - travel datum,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"An epidemiology travel datum is a datum regarding a particular human's travel trip destination, mode, and motivation, with respect to an epidemiology investigation.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03309527,herring fillet in lemon-flavored sauce,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://bioregistry.io/reference/siren:F9527,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03309527,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,herring fillet in lemon-flavored sauce,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000285,pork leg sirloin half,,A leg half that is derived from a whole pork leg. The anatomical location is the “Half” that comes from the Rump or Pelvic region of the Leg.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000285,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pork leg sirloin half,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A leg half that is derived from a whole pork leg. The anatomical location is the “Half” that comes from the Rump or Pelvic region of the Leg.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100144,BGI Genomics sequencing instrument model,,A DNA sequencer manufactured by the BGI Genomics corporation.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100144,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,BGI Genomics sequencing instrument model,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A DNA sequencer manufactured by the BGI Genomics corporation.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0001005,respiratory airway,airways|airway,An airway through which respiratory air passes in organisms.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Trachea|SCTID:361380005,,,,,,,,,,,,,,,,,,,,,,,,airways|airway,,,,,UBERON:0001005,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,respiratory airway,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An airway through which respiratory air passes in organisms.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0001003,skin epidermis,skin|epidermis,The outer epithelial layer of the skin that is superficial to the dermis.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ZFA:0000105|XAO:0000028|Wikipedia:Epidermis_(skin)|VHOG:0000077|UMLS:C0014520|TAO:0000105|SCTID:361694003|NCIT:C12708|MIAA:0000154|MESH:D004817|MAT:0000154|MA:0000153|GAID:932|FMA:70596|EV:0100153|EMAPA:17528|EFO:0000954|CALOHA:TS-0283|BTO:0000404|AAO:0000143,,,,,,,,,,,,,,,,,,,,,,,,skin|epidermis,vertebrate epidermis,,,,UBERON:0001003,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,skin epidermis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The outer epithelial layer of the skin that is superficial to the dermis.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0001004,respiratory system,respiratory system|apparatus respiratorius,Functional system which consists of structures involved in respiration.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ZFA:0000272|XAO:0000117|Wikipedia:Respiratory_system|VHOG:0000202|UMLS:C0035237|TAO:0000272|SCTID:278197002|NCIT:C12779|MIAA:0000030|MESH:D012137|MAT:0000030|MA:0000327|GAID:78|FMA:7158|EV:0100036|EMAPA:16727|EHDAA:2203|EHDAA2:0001604|EFO:0000804|CALOHA:TS-1319|BTO:0000203|AAO:0000541,,,,,,,,,,,,,,,,,,,,,,,,,respiratory system|apparatus respiratorius,,,,UBERON:0001004,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,respiratory system,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Functional system which consists of structures involved in respiration.,,,,,,,,
http://purl.obolibrary.org/obo/NBO_0000313,behavior process,behaviour|behavior,"""The action, reaction, or performance of an organism in response to external or internal stimuli."" [GO:GO\:0007610]",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NBO:0000000,,behaviour|behavior,,,,NBO:0000313,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/nbo.owl,,,,,,,,,behavior process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"""The action, reaction, or performance of an organism in response to external or internal stimuli."" [GO:GO\:0007610]",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03460391,seed roasting,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=H0391,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03460391,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,seed roasting,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_4166,syphilis,,"A primary bacterial infectious disease that is a sexually transmitted systemic disease, has_material_basis_in Treponema pallidum subsp pallidum, which is transmitted_by sexual contact, transmitted_by blood product transfusion, transmitted_by congenital method from mother to fetus or transmitted_by contact with infectious lesions. If left untreated, produces chancres, rashes, and systemic lesions in a clinical course with three stages continued over many years.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:4166,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,syphilis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A primary bacterial infectious disease that is a sexually transmitted systemic disease, has_material_basis_in Treponema pallidum subsp pallidum, which is transmitted_by sexual contact, transmitted_by blood product transfusion, transmitted_by congenital method from mother to fetus or transmitted_by contact with infectious lesions. If left untreated, produces chancres, rashes, and systemic lesions in a clinical course with three stages continued over many years.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100731,infectivity assay tag,infectivity assay data type,A microbiological quantification data tag which indicates the presence of infectivity assay data.,FALSE,,,,,,,infectivity assay,,,,,,,Example Guidance: Use this tag to indicate additional data is available that provides quantification information from infectivity assay(s).,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,infectivity assay data type,,,,GENEPIO:0100731,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-05-18T19:08:34.869Z,,,,,,,,,,,,,,,,,,,infectivity assay tag,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A microbiological quantification data tag which indicates the presence of infectivity assay data.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C30103,Stable,Stable|STABLE,Subject to little fluctuation; showing little if any change.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Stable|STABLE,,,,NCIT:C30103,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Stable,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Subject to little fluctuation; showing little if any change.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490135,"glass container, aluminum lid, plastic lining",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0135,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490135,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"glass container, aluminum lid, plastic lining",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001895,non-lingual set,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001895,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,non-lingual set,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490280,"glass container, coloured, normal weight",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0280,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490280,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"glass container, coloured, normal weight",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_35991,penam,,Compound comprising a beta-lactam ring fused to a saturated 5-membered ring containing one sulfur atom.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:35991,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,penam,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Compound comprising a beta-lactam ring fused to a saturated 5-membered ring containing one sulfur atom.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001780,PFGE Blnl pattern,,A PFGE pattern resulting from DNA fragmentation induced by the Blnl enzyme.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001780,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0001713,,,,,,PFGE Blnl pattern,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://orcid.org/0000-0002-8844-9165,,,,A PFGE pattern resulting from DNA fragmentation induced by the Blnl enzyme.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100549,clinical trial sampling strategy,,A sampling strategy in which individuals are sampled in the context of experiments or observations performed as part of clinical research.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100549,,,,,,,,,,,,,https://orcid.org/0000-0001-5275-8866,2022-09-23T11:08:21Z,,,,,,,,,,,,,,,,,,,clinical trial sampling strategy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A sampling strategy in which individuals are sampled in the context of experiments or observations performed as part of clinical research.,,,,,,,,
http://semanticscience.org/resource/SIO_000501,polygon edge,,A polygon edge is a line segment joining two polygon vertices.,FALSE,,,,,,,,,,,,,,A polygon edge must exist in the same 2 dimensional space (plane or quadratic surface) as the polygon's other edges.  Each polygon edge vertex must join to exactly 1 other polygon edge.  A polygon's edges exist in exactly 1 circuit.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,resource:SIO_000501,,,,,,,,,,,,,,,,,,,,,,,,http://semanticscience.org/resource/SIO_000501,,,,,,,,,polygon edge,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A polygon edge is a line segment joining two polygon vertices.,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_43738,Schizophora,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,Schizophora,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:43738,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Schizophora,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490122,"plastic tray or pan, laminate cover or wrapping",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490122,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"plastic tray or pan, laminate cover or wrapping",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_26761,steroid antibiotic,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:26761,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,steroid antibiotic,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0438,Iranian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0438,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Iranian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0432,Armenian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0432,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Armenian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0434,Bahraini,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0434,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Bahraini,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0431,Algerian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0431,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Algerian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0435,Cypriote,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0435,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Cypriote,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0430,Venezuelan,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0430,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Venezuelan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0439,Iraqi,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0439,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Iraqi,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0433,Azerbaijani,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0433,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Azerbaijani,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0437,Georgian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0437,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Georgian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/IDO_0000586,infection,,"A part of an extended organism that itself has as part a population of one or more infectious agents and that (1) exists as a result of processes initiated by members of the infectious agent population and is (2) clinically abnormal in virtue of the presence of this infectious agent population, or (3) has a disposition to bring clinical abnormality to immunocompetent organisms of the same Species as the host (the organism corresponding to the extended organism) through transmission of a member or offspring of a member of the infectious agent population.",FALSE,,,,,,,,,,,,,,"The organism corresponding to the extended organism is host to the infectious agents.  By this definition, parts of the host can be considered part of the infection.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,IDO:0000586,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ido.owl,,,,,,,,,infection,,,,,,,,,,,,,,,,,,,,,,,,,,,,Lindsay Cowell|Alexander Diehl|Albert Goldfain,,,,"A part of an extended organism that itself has as part a population of one or more infectious agents and that (1) exists as a result of processes initiated by members of the infectious agent population and is (2) clinically abnormal in virtue of the presence of this infectious agent population, or (3) has a disposition to bring clinical abnormality to immunocompetent organisms of the same Species as the host (the organism corresponding to the extended organism) through transmission of a member or offspring of a member of the infectious agent population.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_36841,11-hydroxy steroid,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:36841,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,11-hydroxy steroid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000096,genome annotation source,,For cases where annotation was provided by a community jamboree or model organism database rather than by a specific submitter,FALSE,,,,,,,,,,,,,,,,,,,,,GROUP: MIxS,,,,,,,annotation source description,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000096,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,,,,,,,genome annotation source,,,,,Assembly QC,,,,,,,,,,,,,,,,,,,,,,Annotation Source,,,Standard Term,,For cases where annotation was provided by a community jamboree or model organism database rather than by a specific submitter,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001232,environmental site field,environmental_site|environmental site,A data field which describes an environmental location as a site in the natural or built environment.,FALSE,,,,,,,PCDS:environmental_site,,,,,,,"PCDS: The environmental site answers where sampling occurs and describes the broader environmental setting (e.g. room, facility, or functional space), not the specific material collected.",,,,,,,,,,,,,,PCDS: Hospital; Wet market; Bat cave,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,environmental_site|environmental site,environmental_site,,,,GENEPIO:0001232,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,environmental site field,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://github.com/GenEpiO/genepio/issues/117,A data field which describes an environmental location as a site in the natural or built environment.,,PCDS: A physical location or spatial context in the natural or built environment.,,,,,,
http://purl.obolibrary.org/obo/HP_0002086,Abnormality of the respiratory system,Respiratory abnormality,"An abnormality of the respiratory system, which include the airways, lungs, and the respiratory muscles.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4018871,,,,,,,,,,,,,,,,,,,,,,,,,Respiratory abnormality,,,,HP:0002086,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormality of the respiratory system,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An abnormality of the respiratory system, which include the airways, lungs, and the respiratory muscles.",,,,,,,,
http://purl.obolibrary.org/obo/HP_0002088,Abnormal lung morphology,Unusual lung shape|Abnormally shaped lung|Abnormality of the lungs|Abnormality of lung structure,Any structural anomaly of the lung.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4021760|UMLS:C0024115|SNOMEDCT_US:19829001,,,,,,,,,,,,,,,,,,,,,,,,,Unusual lung shape|Abnormally shaped lung|Abnormality of the lungs|Abnormality of lung structure,,,,HP:0002088,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal lung morphology,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any structural anomaly of the lung.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0002087,Abnormality of the upper respiratory tract,Upper respiratory tract issues|Abnormality of the upper respiratory tract,An abnormality of the upper respiratory tract.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4025727,,,,,,,,,,,,,,,,,,,,,,,,,Upper respiratory tract issues|Abnormality of the upper respiratory tract,,,,HP:0002087,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormality of the upper respiratory tract,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An abnormality of the upper respiratory tract.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100121,Illumina iSeq 100,,A DNA sequencer manufactured by the Illumina corporation using sequence-by-synthesis chemistry that is lightweight and has an output capacity between 144MB-1.2GB.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100121,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,Illumina iSeq 100,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A DNA sequencer manufactured by the Illumina corporation using sequence-by-synthesis chemistry that is lightweight and has an output capacity between 144MB-1.2GB.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0031352,Chest tightness,Tightness of chest|Tightness in chest,An unpleasant sensation of tightness or pressure in the chest.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Tightness of chest|Tightness in chest,,,,HP:0031352,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Chest tightness,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An unpleasant sensation of tightness or pressure in the chest.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00005448,"populated place, Malawi",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00005448,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Malawi",http://purl.obolibrary.org/obo/GAZ_00001105,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490134,"glass container, plastic lid or stopper",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0134,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490134,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"glass container, plastic lid or stopper",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_6050,esophageal disease,,A gastrointestinal system disease that is located_in the esophagus.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:6050,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,esophageal disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A gastrointestinal system disease that is located_in the esophagus.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470117,heat drying process,,Drying by heat.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0117,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470117,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,heat drying process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Drying by heat.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000194,"beef brisket flat half (boneless, raw)",,A raw and boneless beef brisket flat half cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000194,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"beef brisket flat half (boneless, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw and boneless beef brisket flat half cut.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_35627,beta-lactam,,"A lactam in which the amide bond is contained within a four-membered ring, which includes the amide nitrogen and the carbonyl carbon.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:22845|CHEBI:13203|CHEBI:10426,,,,,,CHEBI:35627,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,beta-lactam,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A lactam in which the amide bond is contained within a four-membered ring, which includes the amide nitrogen and the carbonyl carbon.",,,,,,,,
http://purl.obolibrary.org/obo/HP_0002140,Ischemic stroke,Ischaemic stroke,"Acute ischemic stroke (AIS) is defined by the sudden loss of blood flow to an area of the brain with the resulting loss of neurologic function. It is caused by thrombosis or embolism that occludes a cerebral vessel supplying a specific area of the brain. During a vessel occlusion, there is a core area where damage to the brain is irreversible and an area of penumbra where the brain has lost function owing to decreased blood flow but is not irreversibly injured.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0948008|SNOMEDCT_US:422504002,,,,,,,,,,,,,,,,,,,,,,,,,Ischaemic stroke,,,,HP:0002140,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Ischemic stroke,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Acute ischemic stroke (AIS) is defined by the sudden loss of blood flow to an area of the brain with the resulting loss of neurologic function. It is caused by thrombosis or embolism that occludes a cerebral vessel supplying a specific area of the brain. During a vessel occlusion, there is a core area where damage to the brain is irreversible and an area of penumbra where the brain has lost function owing to decreased blood flow but is not irreversibly injured.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02010074,piece of animal organ,,A piece of an animal organ.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02010074,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of animal organ,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A piece of an animal organ.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C28221,Phlebotomy,venipuncture|phlebotomy|blood draw|Venipuncture|Phlebotomy|PHLEBOTOMY|Blood Draw,"The collection of blood from a vein, most commonly via needle venipuncture.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,venipuncture|phlebotomy|blood draw|Venipuncture|Phlebotomy|PHLEBOTOMY|Blood Draw,,,,NCIT:C28221,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Phlebotomy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The collection of blood from a vein, most commonly via needle venipuncture.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C13347,Aspirate,aspirate|Aspirate|ASPIRATE,"Fluid withdrawn from a body cavity, organ, cyst, or tumor.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,aspirate|Aspirate|ASPIRATE,,,,NCIT:C13347,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Aspirate,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Fluid withdrawn from a body cavity, organ, cyst, or tumor.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510021,animal as food consumer,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0021,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510021,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,animal as food consumer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000133,draft pathogenic epi case isolate detail record,,"A record of the details around how, when, and from what an isolate was extracted.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000133,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,draft pathogenic epi case isolate detail record,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"A record of the details around how, when, and from what an isolate was extracted.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510208,increased {name of nutrient} nutrition claim,,"A claim stating that the content in one or more nutrients, other than vitamins and minerals, has been increased, and any claim likely to have the same meaning for the consumer, may only be made where the product meets the conditions for the claim ""source of""and the increase in content is at least 30 % compared to a similar product. [Forordning (EF) nr. 1924/2006 Berigtigelse 2007-01-18].",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0208,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510208,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,increased {name of nutrient} nutrition claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A claim stating that the content in one or more nutrients, other than vitamins and minerals, has been increased, and any claim likely to have the same meaning for the consumer, may only be made where the product meets the conditions for the claim ""source of""and the increase in content is at least 30 % compared to a similar product. [Forordning (EF) nr. 1924/2006 Berigtigelse 2007-01-18].",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002041,obsolete: antibiotic resistant (R),,Resistant indicates that an isolate is observed to offer a greater than intermediate level of resistance to a given antibiotic.,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002041,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: antibiotic resistant (R),,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,http://purl.obolibrary.org/obo/NCIT_C85562,,,Resistant indicates that an isolate is observed to offer a greater than intermediate level of resistance to a given antibiotic.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000025,beef sirloin tip,,"A beef cut that comes from the round primal, and is found on the front end of the rear leg.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000025,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef sirloin tip,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A beef cut that comes from the round primal, and is found on the front end of the rear leg.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0005181,thoracic segment organ,,An organ that part of the thoracic segment region. This region can be further subdividied chest and thoracic cavity regions.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MA:0000563|EMAPA:37271,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0005181,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,thoracic segment organ,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An organ that part of the thoracic segment region. This region can be further subdividied chest and thoracic cavity regions.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000617,lentic water body,,"A lentic water body is a water body in which the accumulated water, in its totality, has very little to no directed flow.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01000617,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,lentic water body,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A lentic water body is a water body in which the accumulated water, in its totality, has very little to no directed flow.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0101197,environmental material constituent,environmental_material_constituent,A material entity with describes the constituents that comprise an environmental material.,FALSE,,,,,,,PCDS:environmental_material_constituent,,,,,,,"PCDS: If applicable, describe the material constituents for the environmental material. Multiple values can be provided, separated by a semi-colon.",,,,,,,,,,,,,,PCDS: Lead; Plastic; Paper,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,environmental_material_constituent,,,,GENEPIO:0101197,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2026-04-13T17:18:02.461Z,,,,,,,,,,,,,,,,,,,environmental material constituent,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A material entity with describes the constituents that comprise an environmental material.,,PCDS: The material constituents that comprise an environmental material.,,,,,,
http://purl.obolibrary.org/obo/CHEBI_29693,thiostrepton,,"A heterodetic cyclic peptide, in which the cyclisation step involves a formal lactonisation between the carboxy group of a quinaldic acid-based residue and a secondary alcohol. An antibiotic that inhibits bacterial protein synthesis. Also acts as an antitumor agent.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:29693,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,thiostrepton,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A heterodetic cyclic peptide, in which the cyclisation step involves a formal lactonisation between the carboxy group of a quinaldic acid-based residue and a secondary alcohol. An antibiotic that inhibits bacterial protein synthesis. Also acts as an antitumor agent.",,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0700081,newborn respiratory distress syndrome,respiratory distress syndrome in premature infants|RDS of prematurity,"A condition beginning in the first day of life that results from inadequate surfactant production, causing increased work of breathing and impaired gas exchange.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SCTID:46775006|NCIT:C27560|ICD9:769|ICD10CM:P22.0|GARD:0026349|EFO:1000644|DOID:12716,,,,,,,,,,,,,,,,,,,,,,,,respiratory distress syndrome|RDS,"syndrome Of newborns (RDS), respiratory distress|respiratory distress syndrome of newborn|respiratory distress syndrome in the newborn|respiratory distress syndrome Of newborns (RDS)|respiratory distress syndrome Of newborns|newborns (RDS), respiratory distress syndrome Of|neonatal respiratory distress syndrome|neonatal respiratory distress|infant respiratory distress syndrome|infant acute respiratory distress syndrome|infant ARDS|hyaline membrane disease|RDS, respiratory distress syndrome Of newborns|RDS Of newborns",respiratory distress syndrome in premature infants|RDS of prematurity,,,MONDO:0700081,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#rare|http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar|http://purl.oboInOwllibrary.org/oboInOwl/mondo#gard_rare,,,,,,,,newborn respiratory distress syndrome,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A condition beginning in the first day of life that results from inadequate surfactant production, causing increased work of breathing and impaired gas exchange.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001888,Canada postal code,,A Canadian postal code is a postal code that pertains to a geographic region of Canada.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Note that a Canadian postal code can cover multiple communities.  Secondly, postal codes can be retired, and then reintroduced elsewhere.  Historical data associations may need to take the date of postal code mapping into account.",,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001888,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Canada postal code,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Canadian postal code is a postal code that pertains to a geographic region of Canada.,,,,,,,"/^((:<FSA>[ABCEGHJKLMNPRSTVXY][0-9][ABCEGHJKLMNPRSTVWXYZ])) ?(:<LDU>[0-9][ABCEGHJKLMNPRSTVWXYZ][0-9])$/i, $FSA $LDU",
http://purl.obolibrary.org/obo/IDO_0000495,infectious disease course,,A disease course that is the realization of an infectious disease.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IDO_0000531,,,,,,,,,,,,,,,,IDO:0000495,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ido.owl,,,,,,,,,infectious disease course,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/OBI_1110040,,,,,,,Lindsay Cowell|Alexander Diehl|Albert Goldfain,,,,A disease course that is the realization of an infectious disease.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00003896,currency note,bank note,A paper product which is used as legal tender in economic or other monetary trasactions.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,bank note,,,,ENVO:00003896,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,currency note,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A paper product which is used as legal tender in economic or other monetary trasactions.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001008,obsolete: NCBI isolate AMR testing model,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001008,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: NCBI isolate AMR testing model,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0001007,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001733,avian - wild,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001733,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,avian - wild,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_47019,dihydroxytetrahydrofuran,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:47019,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,dihydroxytetrahydrofuran,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102192,cubic meter per second,,A volumetric flow rate unit which is the measure of the volume of one cubic meter of matter crosses a given surface during the period of time equal to one second.,FALSE,,,,,,,m^3/s,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102192,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2026-04-13T19:52:38.515Z,,,,,,,,,,,,,,,,,,,cubic meter per second,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A volumetric flow rate unit which is the measure of the volume of one cubic meter of matter crosses a given surface during the period of time equal to one second.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100107,obsolete: Illumina Genome Analyzer II,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,Rehomed in OBI,,,,,,,,,,,,,,,,,,,GENEPIO:0100107,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: Illumina Genome Analyzer II,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/OBI_0000703,,,,,,,,,,,
http://purl.obolibrary.org/obo/OBA_2055787,age of onset of cardiac rhythm disease,age cardiac rhythm disease symptoms begin|age at onset of cardiac rhythm disease,The age at which cardiac rhythm disease manifestations first appear.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,age cardiac rhythm disease symptoms begin|age at onset of cardiac rhythm disease,,,,OBA:2055787,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age of onset of cardiac rhythm disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The age at which cardiac rhythm disease manifestations first appear.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000221,beef rib sub-primal,,A beef cut that is situated under the front section of the backbone.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000221,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef rib sub-primal,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A beef cut that is situated under the front section of the backbone.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000012,other material derived from specimen,,Other: specify the material that was used.,FALSE,,,,,,,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/books/NBK54364/,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000012,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,other material derived from specimen,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,Other: specify the material that was used.,,,,other material,,,,
http://purl.obolibrary.org/obo/FOODON_03510083,low salt claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0083,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510083,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,low salt claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C36288,Connective and Soft Tissue Finding,MUSCULOSKELETAL SYSTEM|Connective and Soft Tissue Finding,"Symptoms, physical examination results, and/or laboratory test results related to the connective and soft tissue.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MUSCULOSKELETAL SYSTEM|Connective and Soft Tissue Finding,,,,NCIT:C36288,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Connective and Soft Tissue Finding,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Symptoms, physical examination results, and/or laboratory test results related to the connective and soft tissue.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0001543,popliteal lymph node,,The lymph nodes which drain the legs; contained in the popliteal fossa.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Popliteal_lymph_node|UMLS:C0588057|SCTID:279156002|NCIT:C53146|MA:0000738|FMA:44227,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0001543,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,popliteal lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The lymph nodes which drain the legs; contained in the popliteal fossa.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0001542,inguinal lymph node,,The lymph nodes located in the groin area.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Inguinal_lymph_node|UMLS:C0729596|SCTID:181762005|NCIT:C32801|MA:0000737|FMA:44226|EMAPA:35431,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0001542,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,inguinal lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The lymph nodes located in the groin area.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0050353,wound botulism,,"A botulism that involves intoxication caused by botulinum neurotoxins (BoNTA, B, E and F), has_material_basis_in Clostridium botulinum A, has_material_basis_in Clostridium botulinum B, has_material_basis_in Clostridium botulinum E and has_material_basis_in Clostridium botulinum F, which are transmitted by contact of spores with the open wounds, which then reproduce in an anaerobic environment to produce toxins.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0050353,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,wound botulism,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A botulism that involves intoxication caused by botulinum neurotoxins (BoNTA, B, E and F), has_material_basis_in Clostridium botulinum A, has_material_basis_in Clostridium botulinum B, has_material_basis_in Clostridium botulinum E and has_material_basis_in Clostridium botulinum F, which are transmitted by contact of spores with the open wounds, which then reproduce in an anaerobic environment to produce toxins.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_0050352,foodborne botulism,,"A botulism that involves intoxication caused by botulinum neurotoxins (BoNTA, B, E and F), which are transmitted by ingestion of food contaminated with preformed toxins, has_material_basis_in Clostridium botulinum A, has_material_basis_in Clostridium botulinum B, has_material_basis_in Clostridium botulinum E and has_material_basis_in Clostridium botulinum F. The infection has symptom blurred vision, has symptom diplopia, has symptom dysarthria, has symptom dysphonia, has symptom dysphagia and has symptom descending muscle paralysis.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0050352,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,foodborne botulism,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A botulism that involves intoxication caused by botulinum neurotoxins (BoNTA, B, E and F), which are transmitted by ingestion of food contaminated with preformed toxins, has_material_basis_in Clostridium botulinum A, has_material_basis_in Clostridium botulinum B, has_material_basis_in Clostridium botulinum E and has_material_basis_in Clostridium botulinum F. The infection has symptom blurred vision, has symptom diplopia, has symptom dysarthria, has symptom dysphonia, has symptom dysphagia and has symptom descending muscle paralysis.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_0050354,infant botulism,,"A botulism that involves intoxication caused by botulinum neurotoxins (BoNTA or B) in infants, has_material_basis_in Clostridium botulinum A or has_material_basis_in Clostridium botulinum B, which are transmitted_by ingestion of bacterial spores, which then grow in the intestine and release toxins. The infection has_symptom constipation, has_symptom lethargy, has_symptom difficulty feeding, has_symptom swallowing, has_symptom ptosis, has_symptom loss of head control, and has_symptom muscle weakness.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0050354,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,infant botulism,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A botulism that involves intoxication caused by botulinum neurotoxins (BoNTA or B) in infants, has_material_basis_in Clostridium botulinum A or has_material_basis_in Clostridium botulinum B, which are transmitted_by ingestion of bacterial spores, which then grow in the intestine and release toxins. The infection has_symptom constipation, has_symptom lethargy, has_symptom difficulty feeding, has_symptom swallowing, has_symptom ptosis, has_symptom loss of head control, and has_symptom muscle weakness.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020404,turkey material,,Material that derives from some turkey.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020404,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,turkey material,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Material that derives from some turkey.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_31739,josamycin,,A macrolide antibiotic produced by certain strains of <em>Streptomyces narbonensis</em> var. <em>josamyceticus</em>.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:31739,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,josamycin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A macrolide antibiotic produced by certain strains of <em>Streptomyces narbonensis</em> var. <em>josamyceticus</em>.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020211,piece of chicken meat (boneless),,A piece of boneless chicken meat.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020211,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of chicken meat (boneless),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A piece of boneless chicken meat.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001389,host health status details,host health status details,A host data field which describes additional information pertaining to the health or disease status of the host at time of collection.,FALSE,,,,,,,PCDS:host_health_status_details,,,,,,,"PCDS: If known, select a value from the pick list.",,,,,,,,,,,,,,PCDS: Hospitalized,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,host health status details,host health status details slot,,,,GENEPIO:0001389,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,host health status details,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A host data field which describes additional information pertaining to the health or disease status of the host at time of collection.,,PCDS: Further details pertaining to the health or disease status of the host at time of collection.,,,,,,
http://purl.obolibrary.org/obo/UBERON_0007361,ruminant reticulum,reticulum,"The second stomach of ruminants. It lies almost in the midline in the front of the abdomen, in contact with the liver and diaphragm and communicates freely with the RUMEN via the ruminoreticular orifice. The lining of the reticulum is raised into folds forming a honeycomb pattern over the surface. (From Concise Veterinary Dictionary, 1988).",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Reticulum_(anatomy)|UMLS:C0035295|SCTID:23703003|NCIT:C98777|MESH:D012159|BTO:0000347,,,,,,,,,,,,,,,,,,,,,,,,reticulum,,,,,UBERON:0007361,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,ruminant reticulum,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The second stomach of ruminants. It lies almost in the midline in the front of the abdomen, in contact with the liver and diaphragm and communicates freely with the RUMEN via the ruminoreticular orifice. The lining of the reticulum is raised into folds forming a honeycomb pattern over the surface. (From Concise Veterinary Dictionary, 1988).",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0007366,ruminant stomach,,"The ruminants' stomach consists of four compartments: rumen, reticulum, omasum and abomasum. The first three compartments comprise the forestomach (proventriculus). They are lined with nonglandular membrane. The fourth compartment, the abomasum comprises the true stomach of the ruminants. It is lined with glandular mucous membrane. The rumen lies on the left of the abdominal cavity, the reticulum cranially and the omasum on the right. The abomasum lies ventrally, its proximal end lies ventral to the rumen, reticulum and omasum.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MESH:D013279|GAID:1240,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0007366,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,ruminant stomach,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The ruminants' stomach consists of four compartments: rumen, reticulum, omasum and abomasum. The first three compartments comprise the forestomach (proventriculus). They are lined with nonglandular membrane. The fourth compartment, the abomasum comprises the true stomach of the ruminants. It is lined with glandular mucous membrane. The rumen lies on the left of the abdominal cavity, the reticulum cranially and the omasum on the right. The abomasum lies ventrally, its proximal end lies ventral to the rumen, reticulum and omasum.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0007364,reticulorumen,retriculo-rumen,"The first chamber in the alimentary canal of a ruminant stomach, composed of the rumen and reticulum.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Reticulorumen,,,,,,,,,,,,,,,,,,,,,,,,,retriculo-rumen,,,,UBERON:0007364,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,reticulorumen,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The first chamber in the alimentary canal of a ruminant stomach, composed of the rumen and reticulum.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0007362,omasum,,"The third stomach of ruminants, situated on the right side of the abdomen at a higher level than the fourth stomach and between this latter and the second stomach, with both of which it communicates. From its inner surface project large numbers of leaves or folia, each of which possesses roughened surfaces. In the center of each folium is a band of muscle fibers which produces a rasping movement of the leaf when it contracts. One leaf rubs against those on either side of it, and large particles of food material are ground down between the rough surfaces, preparatory to further digestion in the succeeeding parts of the alimentary canal. (Black's Veterinary Dictionary, 17th ed).",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Omasum|UMLS:C0028972|NCIT:C98766|MESH:D009851|GAID:1242|BTO:0000348,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0007362,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,omasum,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The third stomach of ruminants, situated on the right side of the abdomen at a higher level than the fourth stomach and between this latter and the second stomach, with both of which it communicates. From its inner surface project large numbers of leaves or folia, each of which possesses roughened surfaces. In the center of each folium is a band of muscle fibers which produces a rasping movement of the leaf when it contracts. One leaf rubs against those on either side of it, and large particles of food material are ground down between the rough surfaces, preparatory to further digestion in the succeeeding parts of the alimentary canal. (Black's Veterinary Dictionary, 17th ed).",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0007365,rumen,,"The first compartment of the ruminant stomach. It lies on the left side of the body, occupying the whole of the left side of the abdomen and even stretching across the median plane of the body to the right side. It is capacious, divided into an upper and a lower sac, each of which has a blind sac at its posterior extremity.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Rumen|UMLS:C0035946|SCTID:45138000|NCIT:C98778|MESH:D012417|GAID:1244|BTO:0001194,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0007365,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,rumen,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The first compartment of the ruminant stomach. It lies on the left side of the body, occupying the whole of the left side of the abdomen and even stretching across the median plane of the body to the right side. It is capacious, divided into an upper and a lower sac, each of which has a blind sac at its posterior extremity.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_9908,internal hordeolum,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:9908,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,internal hordeolum,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0004870,superficial cervical lymph node,,A group of nodes lying along the external jugular vein; they drain the skin and superficial structures over the region of the sternocleidomastoid muscle and anterior cervical regions. Efferent vessels drain to the deep cervical lymph nodes. Lymph nodes can be further subdivided into anterior and lateral groupings.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Superficial_cervical_lymph_nodes|UMLS:C0458297|SCTID:279144003|NCIT:C33659|MA:0002886|EMAPA:37725,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0004870,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,superficial cervical lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A group of nodes lying along the external jugular vein; they drain the skin and superficial structures over the region of the sternocleidomastoid muscle and anterior cervical regions. Efferent vessels drain to the deep cervical lymph nodes. Lymph nodes can be further subdivided into anterior and lateral groupings.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_167559,glycan,,"Any oligosaccharide, polysaccharide or their derivatives consisting of monosaccharides or monosaccharide derivatives linked by glycosidic bonds. See also <a href=""http://www.ontobee.org/ontology/GNO?iri=http://purl.obolibrary.org/obo/GNO_00000001"" target=""_blank"">http://www.ontobee.org/ontology/GNO?iri=http://purl.obolibrary.org/obo/GNO_00000001</a>.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:167559,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,glycan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Any oligosaccharide, polysaccharide or their derivatives consisting of monosaccharides or monosaccharide derivatives linked by glycosidic bonds. See also <a href=""http://www.ontobee.org/ontology/GNO?iri=http://purl.obolibrary.org/obo/GNO_00000001"" target=""_blank"">http://www.ontobee.org/ontology/GNO?iri=http://purl.obolibrary.org/obo/GNO_00000001</a>.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03450021,cooking in steam,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=G0021,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03450021,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,cooking in steam,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001049,human related exposure event,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001049,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,human related exposure event,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530207,food plant cultivation,,The cultivation of plants for food.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0207,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530207,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food plant cultivation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The cultivation of plants for food.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100618,incubation temperature unit,,PCDS: Select the temperature unit from the pick list.,FALSE,,,,,,,PCDS:incubation_temperature_unit,,,,,,,PCDS: Select the temperature unit from the pick list.,,,,,,,,,,,,,,PCDS: Degree Celsius,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100618,,,,,,,,,,,,,,2026-04-13T17:18:02.461Z,,,,,,,,,,,,,,,,,,,incubation temperature unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PCDS: An environmental datum specifying the temperature unit at which an organism or organisms were incubated for the purposes of growth on or in a particular medium.,,,,,,
http://purl.obolibrary.org/obo/ARO_3004410,micro broth dilution method,,Broth dilution conducted on 96-well microtiter plates (≤200 µL per well).,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ARO:3004410,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/aro.owl,,,,,,,,,micro broth dilution method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Broth dilution conducted on 96-well microtiter plates (≤200 µL per well).,,,,,,,,
http://purl.obolibrary.org/obo/ARO_3004430,antimicrobial resistance tissue specificity,,"The tissue type used to select breakpoints from a particular standard, for the interpretation of MIC results.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ARO:3004430,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/aro.owl,,,,,,,,,antimicrobial resistance tissue specificity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The tissue type used to select breakpoints from a particular standard, for the interpretation of MIC results.",,,depth:1,,,,,
http://purl.obolibrary.org/obo/UO_0000076,mole fraction,chi|(x),A concentration unit which denotes the number of moles of solute as a proportion of the total number of moles in a solution.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,chi|(x),,,,UO:0000076,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,mole fraction,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A concentration unit which denotes the number of moles of solute as a proportion of the total number of moles in a solution.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000283,pork leg,,A primal skeletal area of a pig that extends from groin to ankle.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000283,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pork leg,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A primal skeletal area of a pig that extends from groin to ankle.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C171551,COVID-19-Associated Acute Respiratory Distress Syndrome,SARS-CoV-2-Associated Acute Respiratory Distress Syndrome|COVID-19-Associated Acute Respiratory Distress Syndrome|ARDS,Acute respiratory distress syndrome caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2).,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SARS-CoV-2-Associated Acute Respiratory Distress Syndrome|COVID-19-Associated Acute Respiratory Distress Syndrome|ARDS,,,,NCIT:C171551,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,COVID-19-Associated Acute Respiratory Distress Syndrome,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Acute respiratory distress syndrome caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2).,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C171550,COVID-19-Associated Pneumonia,SARS-CoV-2 -Associated Pneumonia|Pneumonia|COVID-19-Associated Pneumonia,Pneumonia caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). It is characterized by the presence of ground glass opacities on CT scan images.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SARS-CoV-2 -Associated Pneumonia|Pneumonia|COVID-19-Associated Pneumonia,,,,NCIT:C171550,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,COVID-19-Associated Pneumonia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Pneumonia caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). It is characterized by the presence of ground glass opacities on CT scan images.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001302,lab test history record,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001302,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,lab test history record,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000670,incidence rate,,A rate in which the number of new events per total at risk is divided by an interval of time.,FALSE,,,,,,,incidence density|average hazard rate,,,,,,,,,,,,,,"adapted from:
https://www.cdc.gov/csels/dsepd/ss1978/lesson3/section2.html
and
NCIt: Incidence Rate = The frequency of new occurrences of an event during a specified time period.",,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000670,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,incidence rate,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Brian S. Alper, Harold Lehmann, Joanne Dehnbostel, Kenneth Wilkins, Muhammad Afzal",,,,A rate in which the number of new events per total at risk is divided by an interval of time.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C198996,Person by Relationship,Person by Relationship,A person described by their relationship with another person.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Person by Relationship,,,,NCIT:C198996,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Person by Relationship,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A person described by their relationship with another person.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C198997,Person by Activity Type,Person by Activity Type,A person described by an activity with which they are engaged.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Person by Activity Type,,,,NCIT:C198997,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Person by Activity Type,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A person described by an activity with which they are engaged.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C198995,Person by OccupationType,Person by OccupationType,An individual who is classified by their work type.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Person by OccupationType,,,,NCIT:C198995,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Person by OccupationType,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An individual who is classified by their work type.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C198998,Person by Legal Status,Person by Legal Status,A person described in legal terms.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Person by Legal Status,,,,NCIT:C198998,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Person by Legal Status,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A person described in legal terms.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C198999,Person by Personal Characteristic,Person by Personal Characteristic,An individual characterized based on a personal characteristic.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Person by Personal Characteristic,,,,NCIT:C198999,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Person by Personal Characteristic,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An individual characterized based on a personal characteristic.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530045,breast (meat cut),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0045,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530045,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,breast (meat cut),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000040,beef eye of round (raw),,A raw beef eye of round cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000040,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef eye of round (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef eye of round cut.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470141,natural heat drying,,"Dried by natural heat, usually through exposure to the sun. Includes field-dried products such as grains and dry beans. These products are included also if they have been artificially dried to return them to normal dry state, e.g. grain that has been artificially dried after harvest.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0141,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470141,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,natural heat drying,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Dried by natural heat, usually through exposure to the sun. Includes field-dried products such as grains and dry beans. These products are included also if they have been artificially dried to return them to normal dry state, e.g. grain that has been artificially dried after harvest.",,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00003108,"populated place, Sweden",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00003108,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Sweden",http://purl.obolibrary.org/obo/GAZ_00002729,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000025,subject anatomical site,,"Name of body site where the specimen was obtained from, such as a specific organ or tissue.",FALSE,,,http://purl.obolibrary.org/obo/GENEPIO_0002077,,,,,,,,,,,,,,,,,,GROUP: MIxS,,,,"Damion Dooley's note: Although term mentions ""site"" in label, this cannot be placed under ""site"" as it is intended to refer to organism material, and leads to unsatisfiable terms otherwise.",,,"gut, spine, tongue, lung",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0002077,GENEPIO:0000025,http://purl.obolibrary.org/obo/GENEPIO_0002077,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,,,,,,,subject anatomical site,,,,,Pathogen Isolate,,,,,,,,,,,,,,,,,http://gensc.org/ns/mixs/host_body_site,,,,,,,,inferred from BCCDC interviews,,"Name of body site where the specimen was obtained from, such as a specific organ or tissue.",,,,,,,,
http://purl.obolibrary.org/obo/APOLLO_SV_00000511,infection acquisition through sexual activity with infectious host,,An infection acquistion from infectious host that is causally downstream of some potentially infectious sexual contacting,FALSE,,,,,,,,,,,,,,"Note that infections that are acquired in this manner do not fall within the class of sexually transmitted infections (STI's), ipso facto. This type of transmission can also occur with non-STI pathogens--such as meningitis and Zika.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,APOLLO_SV:00000511,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/apollo_sv.owl,,,,,,,,,infection acquisition through sexual activity with infectious host,,,,,,,,,,,,,,,,,,,,,,,,,,,,Matthew Diller,,,,An infection acquistion from infectious host that is causally downstream of some potentially infectious sexual contacting,,,,,,,,
http://purl.obolibrary.org/obo/HP_0031273,Shock,,"The state in which profound and widespread reduction of effective tissue perfusion leads first to reversible, and then if prolonged, to irreversible cellular injury.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0031273,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Shock,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The state in which profound and widespread reduction of effective tissue perfusion leads first to reversible, and then if prolonged, to irreversible cellular injury.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000106,draft data standard,,"The 'draft data standard' class contains draft representations of formal or defacto third party standards and related components.  These representations may have been crafted without any involvement of related standards issuers and so no guarantee can be provided about their currency, accuracy or veracity.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000106,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,draft data standard,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"The 'draft data standard' class contains draft representations of formal or defacto third party standards and related components.  These representations may have been crafted without any involvement of related standards issuers and so no guarantee can be provided about their currency, accuracy or veracity.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_26416,pyridine alkaloid,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:26416,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,pyridine alkaloid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000269,leg of lamb (raw),,A raw leg of lamb.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000269,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,leg of lamb (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw leg of lamb.,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000290,Beti-Pahuin,,"A Bantu Western, Bantu Central population with a population size of 3.3 millions with a group of 20 sub-ethnicities",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000290,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Beti-Pahuin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A Bantu Western, Bantu Central population with a population size of 3.3 millions with a group of 20 sub-ethnicities",,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000292,Kongo,,A Bantu Central population with a population size of 17 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000292,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Kongo,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Bantu Central population with a population size of 17 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000299,Tikar,,A Bantu Central population with a population size of 0.025 million,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000299,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Tikar,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Bantu Central population with a population size of 0.025 million,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000295,Moghamo,,A Bantu Central population with a population size of 0.018 million,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000295,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Moghamo,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Bantu Central population with a population size of 0.018 million,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000298,Ngamambo,,A Bantu Central population with a population size of 0.08 million,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000298,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Ngamambo,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Bantu Central population with a population size of 0.08 million,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000294,Mbundu,,A Bantu Central population with a population size of 6.4 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000294,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Mbundu,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Bantu Central population with a population size of 6.4 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000293,Luba,,The Luba are a Bantu Central population with a population size of >15 million.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000293,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Luba,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The Luba are a Bantu Central population with a population size of >15 million.,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000296,Mongo,,The Mongo are a Bantu Central population with a population size of >15 million.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000296,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Mongo,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The Mongo are a Bantu Central population with a population size of >15 million.,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000291,Chokwe,,A Bantu Central population with a population size of 1.1 million,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000291,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Chokwe,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Bantu Central population with a population size of 1.1 million,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000297,Ngala,,A Bantu Central population with a population size of 25 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000297,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Ngala,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Bantu Central population with a population size of 25 millions,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490219,pail,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0219,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490219,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pail,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00005411,pork blade roast,,A pork roast that is derived from the Shoulder Blade or Loin Blade,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00005411,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pork blade roast,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A pork roast that is derived from the Shoulder Blade or Loin Blade,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_24983,ketoxime,,Oximes of ketones R<small><sub>2</sub></small>C=NOH (where R ≠ H).,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:24983,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,ketoxime,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Oximes of ketones R<small><sub>2</sub></small>C=NOH (where R ≠ H).,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000266,lamb sirloin chop (boneless),,A boneless lamb sirloin chop.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000266,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lamb sirloin chop (boneless),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A boneless lamb sirloin chop.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03430147,"whole, shape achieved by forming",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=E0147,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03430147,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"whole, shape achieved by forming",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0017672,abdominal viscera,set of abdominal viscera|abdominal viscera set|abdominal viscera,A viscus that is part of a abdomen.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:67355|FMA:32413,,,,,,,,,,,,,,,,,,,,,,,,,set of abdominal viscera|abdominal viscera set|abdominal viscera,,,,UBERON:0017672,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,abdominal viscera,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A viscus that is part of a abdomen.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C1932,Chemical Modifier,Modifier|Chemical Modifier,A chemical that influences the properties of another chemical or biological function. (NCI),FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Modifier|Chemical Modifier,,,,NCIT:C1932,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Chemical Modifier,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A chemical that influences the properties of another chemical or biological function. (NCI),,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001935,obsolete: Ion Torrent PGM,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,NCBI SRA: Ion Torrent PGM,,,,,,,,,,"Redundant with ""term replaced by"" entity.",,,,,,,,,,,,,,,,,,,GENEPIO:0001935,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: Ion Torrent PGM,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0100136,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100820,fecal coliform count method,fecal coliform count method|faecal coliform count method,An environmental data field which describes the method used to measure fecal coliforms.,FALSE,,,,,,,PCDS:fecal_coliform_count_method,,,,,,,PCDS: Provide the name of the procedure or technology used to measure fecal coliforms.,,,,,,,,,,,,,,PCDS: MPN method via serial dilutions until lack of growth,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,fecal coliform count method|faecal coliform count method,fecal coliform count method slot|faecal coliform count method slot,,,,GENEPIO:0100820,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,fecal coliform count method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the method used to measure fecal coliforms.,,PCDS: The method used to measure fecal coliforms.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001903,set of unordered strings,,Subclasses here are types of string that have a particular syntactic structure or constraint to them that should be expressable using regular expressions.,FALSE,,,,,,,,,,,,,,Subclasses here are types of string that have a particular syntactic structure or constraint to them that should be expressable using regular expressions.,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001903,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,set of unordered strings,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_29584,GE2270A,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:42746,,,,,,CHEBI:29584,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,GE2270A,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100193,daycare exposure process,,A process occuring within or in the vicinity of a human daycare environment that exposes the recipient organism to a material entity.,FALSE,,,,,,,Daycare,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100193,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,daycare exposure process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A process occuring within or in the vicinity of a human daycare environment that exposes the recipient organism to a material entity.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002030,subject provided consent,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002030,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,subject provided consent,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001212,subject disease outcome,,A subject disease outcome is an assessment of the persistence of a given disease course in a subject (patient),FALSE,,,,,,,,,,,,,,"Note that this is closely related to OGMS_0000063 ""disease course"" that lists chronic, progressive, transient and accute processes.",,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001212,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,subject disease outcome,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,NCBI BioSample,,A subject disease outcome is an assessment of the persistence of a given disease course in a subject (patient),,,lookup|depth:1,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100146,MGI sequencing instrument model,,A DNA sequencer manufactured by the MGI corporation.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100146,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,MGI sequencing instrument model,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A DNA sequencer manufactured by the MGI corporation.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_50896,azabicycloalkene,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:50896,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,azabicycloalkene,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/MP_0031127,dry gangrene,,"a form of coagulative necrosis that develops in ischemic tissue, where the blood supply is inadequate to keep tissue viable, in the absence of superimposed microbial infection; can be due to peripheral artery disease or acute limb ischemia; the affected body part is dry, shrunken, and dark reddish-black and can fall off (autoamputate) if not removed surgically",FALSE,,,,,,,,,,,,,,"The term dry is used only when referring to a limb or to the gut; in other locations, this same type of necrosis is called an infarction, such as myocardial infarction",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MP:0031127,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mp.owl,,,,,,,,,dry gangrene,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"a form of coagulative necrosis that develops in ischemic tissue, where the blood supply is inadequate to keep tissue viable, in the absence of superimposed microbial infection; can be due to peripheral artery disease or acute limb ischemia; the affected body part is dry, shrunken, and dark reddish-black and can fall off (autoamputate) if not removed surgically",,,,,,,,
http://purl.obolibrary.org/obo/MP_0031126,gangrene,gangrenous necrosis,"necrosis or death of soft tissue due to lack of blood flow resulting from injury, infection or other conditions that affect blood circulation",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,gangrenous necrosis,,,,MP:0031126,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mp.owl,,,,,,,,,gangrene,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"necrosis or death of soft tissue due to lack of blood flow resulting from injury, infection or other conditions that affect blood circulation",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100662,quality control datum,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,uncurated,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100662,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788,2023-01-23T00:42:19.315Z,,,,,,,,,,,,,,,,,,,quality control datum,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001501,lineage clade analysis software name,lineage/clade analysis software name,A data field which describe the name of the software used to determine the lineage/clade.,FALSE,,,,,,,PCDS:lineage_clade_analysis_software_name,,,,,,,PCDS: Provide the name of the software used to determine the lineage/clade.,,,,,,,,,,,,,,PCDS: EPI2ME,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,lineage/clade analysis software name,lineage/clade analysis software name slot|lineage or clade analysis software name slot|lineage or clade analysis software name field,,,,GENEPIO:0001501,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,lineage clade analysis software name,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describe the name of the software used to determine the lineage/clade.,,PCDS: The name of the software used to determine the lineage/clade.,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490220,sealing/closing element,,Classification corresponding to FSTA Thesaurus Packaging 3.2.4 Sealing/closing means,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0220,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490220,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,sealing/closing element,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Classification corresponding to FSTA Thesaurus Packaging 3.2.4 Sealing/closing means,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001005,greater than or equal to,,"The ""greater than or equal to"" comparator indicates that a given substance was present at greater than or equal to a given quantity or concentration.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,>=,,,,,,GENEPIO:0001005,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,greater than or equal to,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"The ""greater than or equal to"" comparator indicates that a given substance was present at greater than or equal to a given quantity or concentration.",,,,>=,,,,
http://purl.obolibrary.org/obo/FOODON_02000165,beef tri-tip steak,,A steak cut from the beef tri-tip section.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000165,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef tri-tip steak,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A steak cut from the beef tri-tip section.,,,,,,,,
http://purl.obolibrary.org/obo/OMIT_0021247,Physical Therapy Modalities,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OMIT:0021247,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/omit.owl,,,,,,,,,Physical Therapy Modalities,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001122,database identifiers field category,PCDS:database identifiers,A data field category which refers to database identifier fields.,FALSE,,,,,,,PCDS:database_identifiers_slot_group,,,,,,,,,,,,,,,,,,,,,,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,PCDS:database identifiers,database identifiers slot category,,,,GENEPIO:0001122,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,database identifiers field category,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field category which refers to database identifier fields.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C157332,Kidney Transplant Recipient,Kidney Transplantation Recipient|Kidney Transplant Recipient,An individual who is receiving or has received a transplant of a kidney.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Kidney Transplantation Recipient|Kidney Transplant Recipient,,,,NCIT:C157332,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Kidney Transplant Recipient,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An individual who is receiving or has received a transplant of a kidney.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000460,buffalo top round (raw),,A raw buffalo top round cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000460,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,buffalo top round (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw buffalo top round cut.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03500037,polyvinyl chloride surface,,PVC,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=N0037,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03500037,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,polyvinyl chloride surface,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PVC,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100479,antimicrobial resistance field category,PCDS:antimicrobial resistance,A data field category which refers to antimicrobial resistance fields.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,(2026-02-28) Under review for deprecation.,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,PCDS:antimicrobial resistance,antimicrobial resistance slot category,,,,GENEPIO:0100479,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-06-25T03:32:51.876Z,,,,,,,,,,,,,,,,,,,antimicrobial resistance field category,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field category which refers to antimicrobial resistance fields.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510158,rabbit as consumer,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0158,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510158,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,rabbit as consumer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100905,total daily flow rate measurement value,,An environmental data field which describes the numerical value of a measured fluid flow rate over the course of a day.,FALSE,,,,,,,PCDS:total_daily_flow_rate_measurement_value,,,,,,,PCDS: Provide the numerical value of the measured flow rate.,,,,,,,,,,,,,,PCDS: 10,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100905,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-1107-9135,2023-10-17T17:41:08.995Z,,,,,,,,,,,,,,,,,,,total daily flow rate measurement value,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the numerical value of a measured fluid flow rate over the course of a day.,,PCDS: The numerical value of a measured fluid flow rate over the course of a day.,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470169,concentration by reverse osmosis,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0169,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470169,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,concentration by reverse osmosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00010504,surface layer,,A layer of some material entity which is adjacent to one or more of its external boundaries and directly interacts with its immediate surroundings.,FALSE,,,,,,,,,,,,,,"This class is distinct from a geometric surface, which is two-dimensional. The idea of ""uppermost"" may be problematic. Further, the definition of layer (the superclass of surface in rev 133) references surface. This may be another issue. Perhaps this can be made into an inferred class using 'bounding layer of' some material entity, note that 'bounding layer' implies containment, which may not be valid here.",,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Surface|http://sweetontology.net/reprSpaceGeometry/Surface|EcoLexicon:surface,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00010504,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,surface layer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A layer of some material entity which is adjacent to one or more of its external boundaries and directly interacts with its immediate surroundings.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100212,household exposure process,,A process occuring within or in the vicinity of a household that exposes the recipient organism to a material entity.,FALSE,,,,,,,Household,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100212,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,household exposure process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A process occuring within or in the vicinity of a household that exposes the recipient organism to a material entity.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490258,cork wood gasket,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0258,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490258,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,cork wood gasket,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_10090,Mus musculus,,,FALSE,,,,,,,mouse|house mouse,,,,,,,,,,,,,,,,,,,Mus musculus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:10090,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Mus musculus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000925,abattoir,slaughterhouse|slaughter plant,A facility in which non-human animals are slaughtered and processed for human consumption.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,slaughterhouse|slaughter plant,,,,ENVO:01000925,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,abattoir,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A facility in which non-human animals are slaughtered and processed for human consumption.,,,,,,,,
http://purl.obolibrary.org/obo/OBA_2001002,age of onset of urinary bladder carcinoma,age urinary bladder carcinoma symptoms begin|age at onset of urinary bladder carcinoma,The age at which urinary bladder carcinoma manifestations first appear.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,age urinary bladder carcinoma symptoms begin|age at onset of urinary bladder carcinoma,,,,OBA:2001002,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age of onset of urinary bladder carcinoma,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The age at which urinary bladder carcinoma manifestations first appear.,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_9825,Sus scrofa domesticus,,,FALSE,,,,,,,domestic pig,,,,,,,,,,,,,,,,,,,Sus scrofa domesticus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:9825,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Sus scrofa domesticus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02021423,piece of elk,,A severed part of an elk.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02021423,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of elk,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A severed part of an elk.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020061,piece of avian animal (raw),,A raw piece of avian animal.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020061,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of avian animal (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw piece of avian animal.,,,,,,,,
http://purl.obolibrary.org/obo/MPATH_1000,pathological phenotype observation,,Phenotypic observation of the presence or absence of a pathological entity.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MPATH:1000,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mpath.owl,,,,,,,,,pathological phenotype observation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Phenotypic observation of the presence or absence of a pathological entity.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100852,artic-v5.0.0_400 strategy,,An amplicon strategy which was developed by the ARTIC consortium for SARS-CoV-2 with the attributes of version 5.0.0 which produces amplicons approximately 400bp in length.,FALSE,,,,,,,artic-v5.0.0_400|artic v5.0.0_400,,,,,,,,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100852,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2026-04-13T19:52:38.515Z,,,,,,,,,,,,,,,,,,,artic-v5.0.0_400 strategy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An amplicon strategy which was developed by the ARTIC consortium for SARS-CoV-2 with the attributes of version 5.0.0 which produces amplicons approximately 400bp in length.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000014,other project method,,Specify the project method,FALSE,,,,,,,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/books/NBK54364/,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000014,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,other project method,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,Specify the project method,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490209,wax container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0209,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490209,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,wax container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001799,user identifier,,"A user identifier is an identifier provided as part of an authentication process of a client (user) to a service (server).  User identifiers normally persist over time, in contrast to session identifiers which are temporary.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001799,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,user identifier,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"A user identifier is an identifier provided as part of an authentication process of a client (user) to a service (server).  User identifiers normally persist over time, in contrast to session identifiers which are temporary.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510062,low sugars food,,"A claim that a food is low in sugars, and any claim likely to have the same meaning for the consumer, may only be made where the product contains no more than 5 g of sugars per 100 g for solids or 2,5 g of sugars per 100 ml for liquids [REGULATION (EC) No 1924/2006 Corrigendum 2007-01-18].

Not defined in U.S. Federal Register; no basis for a recommended intake.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0062,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510062,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,low sugars food,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A claim that a food is low in sugars, and any claim likely to have the same meaning for the consumer, may only be made where the product contains no more than 5 g of sugars per 100 g for solids or 2,5 g of sugars per 100 ml for liquids [REGULATION (EC) No 1924/2006 Corrigendum 2007-01-18].

Not defined in U.S. Federal Register; no basis for a recommended intake.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0002409,pericardial fluid,,Transudate contained in the pericardial cavity.[FMA].,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Pericardial_fluid|MESH:D000069236|MA:0002530|FMA:9887|BTO:0001016,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0002409,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,pericardial fluid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Transudate contained in the pericardial cavity.[FMA].,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0002402,pleural cavity,cavitas pleuralis,The fluid-filled cavity that lies between the visceral and parietal pleurae.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Pleural_cavity|VHOG:0000581|UMLS:C0178802|SCTID:361999006|NCIT:C12840|MESH:D035422|MA:0000055|GAID:95|FMA:9740|EMAPA:16774|EMAPA:16773|EHDAA2:0001475|BTO:0004422,,,,,,,,,,,,,,,,,,,,,,,,,cavitas pleuralis,,,,UBERON:0002402,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,pleural cavity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The fluid-filled cavity that lies between the visceral and parietal pleurae.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530145,rumsteck,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0145,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530145,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,rumsteck,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_13819,lymphogranuloma venereum,,"A commensal bacterial infectious disease that results_in infection located_in lymph nodes, has_material_basis_in Chlamydia trachomatis, which is transmitted_by sexual contact, and transmitted_by fomites. The infection has_symptom inguinal lymphadenitis, has_symptom abscesses in the groin area, and has_symptom lymphangitis.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:13819,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,lymphogranuloma venereum,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A commensal bacterial infectious disease that results_in infection located_in lymph nodes, has_material_basis_in Chlamydia trachomatis, which is transmitted_by sexual contact, and transmitted_by fomites. The infection has_symptom inguinal lymphadenitis, has_symptom abscesses in the groin area, and has_symptom lymphangitis.",,,,,,,,
http://purl.obolibrary.org/obo/OBI_0000245,organization,,"An entity that can bear roles, has members, and has a set of organization rules. Members of organizations are either organizations themselves or individual people. Members can bear specific organization member roles that are determined in the organization rules. The organization rules also determine how decisions are made on behalf of the organization by the organization members.",FALSE,,,,,,,,,,,,,,,,,,,,,GROUP: OBI,,,,"BP: The definition summarizes long email discussions on the OBI developer, roles, biomaterial and denrie branches. It leaves open if an organization is a material entity or a dependent continuant, as no consensus was reached on that.  The current placement as material is therefore temporary, in order to move forward with development. Here is the entire email summary, on which the definition is based:

1) there are organization_member_roles (president, treasurer, branch
editor), with individual persons as bearers

2) there are organization_roles (employer, owner, vendor, patent holder)

3) an organization has a charter / rules / bylaws, which specify what roles
there are, how they should be realized, and how to modify the
charter/rules/bylaws themselves.

It is debatable what the organization itself is (some kind of dependent
continuant or an aggregate of people). This also determines who/what the
bearer of organization_roles' are. My personal favorite is still to define
organization as a kind of 'legal entity', but thinking it through leads to
all kinds of questions that are clearly outside the scope of OBI.

Interestingly enough, it does not seem to matter much where we place
organization itself, as long as we can subclass it (University, Corporation,
Government Agency, Hospital), instantiate it (Affymetrix, NCBI, NIH, ISO,
W3C, University of Oklahoma), and have it play roles.

This leads to my proposal: We define organization through the statements 1 -
3 above, but without an 'is a' statement for now. We can leave it in its
current place in the is_a hierarchy (material entity) or move it up to
'continuant'. We leave further clarifications to BFO, and close this issue
for now.",organization,,PMID: 16353909.AAPS J. 2005 Sep 22;7(2):E274-80. Review. The joint food and agriculture organization of the United Nations/World Health Organization Expert Committee on Food Additives and its role in the evaluation of the safety of veterinary drug residues in foods.,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0000245,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,organization,,,,,,,,,,,,,,,,,,,,,,,,,,,,PERSON: Susanna Sansone|PERSON: Philippe Rocca-Serra|PERSON: Bjoern Peters|PERSON: Alan Ruttenberg,,,,"An entity that can bear roles, has members, and has a set of organization rules. Members of organizations are either organizations themselves or individual people. Members can bear specific organization member roles that are determined in the organization rules. The organization rules also determine how decisions are made on behalf of the organization by the organization members.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_33250,atom,,A chemical entity constituting the smallest component of an element having the chemical properties of the element.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:23907|CHEBI:22671,,,,,,CHEBI:33250,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,atom,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A chemical entity constituting the smallest component of an element having the chemical properties of the element.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_3992,cyclic ketone,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:3992,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,cyclic ketone,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000003,Minimum Information about any (x) Sequence (MIxS),,MixS is a unified standard for describing sequence data provided by the Genomic Standards Consortium (GSC),FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000003,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Minimum Information about any (x) Sequence (MIxS),,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,MixS is a unified standard for describing sequence data provided by the Genomic Standards Consortium (GSC),,,,MIxS standard,,,,
http://purl.obolibrary.org/obo/OMIT_0010718,N-Glycosyl Hydrolases,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OMIT:0010718,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/omit.owl,,,,,,,,,N-Glycosyl Hydrolases,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_26082,phosphorus molecular entity,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:26082,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,phosphorus molecular entity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002064,obsolete: Clinical and Laboratory Standards Institute (CLSI),,The Clinical and Laboratory Standards Institute develops and implements clinical laboratory testing standards,TRUE,,,,,,,NCCLS,,,,,,,"On January 1, 2005 the National Committee on Clinical Laboratory Standards (NCCLS) changed its name to CLSI",,,,,,,http://clsi.org,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CLSI,,,,,,GENEPIO:0002064,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: Clinical and Laboratory Standards Institute (CLSI),,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,http://purl.obolibrary.org/obo/ARO_3004366,,,The Clinical and Laboratory Standards Institute develops and implements clinical laboratory testing standards,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C91108,Middle Adult,Middle Age|Middle Adult,"An age group comprised of individuals between young adult and elderly, approximately 40-60 years of age.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Middle Age|Middle Adult,,,,NCIT:C91108,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Middle Adult,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An age group comprised of individuals between young adult and elderly, approximately 40-60 years of age.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510169,noncarbonated claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0169,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510169,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,noncarbonated claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100099,refractory cardiogenic plus vasoplegic shock,,A persistent form of cardiogenic shock that presents simultaneously with vasoplegic shock.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100099,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,refractory cardiogenic plus vasoplegic shock,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A persistent form of cardiogenic shock that presents simultaneously with vasoplegic shock.,,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000544,heritability,,"In a planned experiment where to covariance (genotype  x environment) can be controlled and held at 0, the heritability is defined as the ratio of the variance of the genotypic variables to the variance of the phenotypic variables.

H2 = Var(G)/Var(P)

H2 is the broad-sense heritability. This reflects all the genetic contributions to a population's phenotypic variance including additive, dominant, and epistatic (multi-genic interactions), as well as maternal and paternal effects, where individuals are directly affected by their parents' phenotype, for example, milk production in mammals.",FALSE,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Heritability,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000544,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,heritability,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra,,,,"In a planned experiment where to covariance (genotype  x environment) can be controlled and held at 0, the heritability is defined as the ratio of the variance of the genotypic variables to the variance of the phenotypic variables.

H2 = Var(G)/Var(P)

H2 is the broad-sense heritability. This reflects all the genetic contributions to a population's phenotypic variance including additive, dominant, and epistatic (multi-genic interactions), as well as maternal and paternal effects, where individuals are directly affected by their parents' phenotype, for example, milk production in mammals.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100024,protocol testing sampling,,A research sampling strategy in which samples are collected in order to test a method or protocol.,FALSE,,,,,,,Protocol testing experiment|Protocol testing,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100024,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,protocol testing sampling,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A research sampling strategy in which samples are collected in order to test a method or protocol.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0003729,mouth mucosa,tunica mucosa oris|oral part of viscerocranial mucosa|oral mucous membrane|mucous membrane of mouth|mucosa of mouth|mouth organ mucosa|mouth mucous membrane|mouth mucosa,A mucous membrane that lines the mouth.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Oral_mucosa|UMLS:C0026639|NCIT:C77637|MESH:D009061|MA:0002794|GAID:951|FMA:59660|EMAPA:26937|CALOHA:TS-0716|BTO:0002860,,,,,,,,,,,,,,,,,,,,,,,,,tunica mucosa oris|oral part of viscerocranial mucosa|oral mucous membrane|mucous membrane of mouth|mucosa of mouth|mouth organ mucosa|mouth mucous membrane|mouth mucosa,,,,UBERON:0003729,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,mouth mucosa,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A mucous membrane that lines the mouth.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510168,pareve claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0168,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510168,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pareve claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ECTO_6000000,exposure to behavior,Activity exposure,An exposure event involving Activity,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Activity exposure,,,,ECTO:6000000,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ecto.owl,,,,,,,,,exposure to behavior,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An exposure event involving Activity,,,,,,,,
http://purl.obolibrary.org/obo/ECTO_6000001,exposure to violence,Violence exposure,An exposure event involving Violence,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Violence exposure,,,,ECTO:6000001,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ecto.owl,,,,,,,,,exposure to violence,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An exposure event involving Violence,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C15360,Adjuvant Chemotherapy,Adjuvant Chemotherapy|Adjuvant,Chemotherapy that is administered subsequent to the main treatment plan to minimize or prevent disease recurrence.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Adjuvant Chemotherapy|Adjuvant,,,,NCIT:C15360,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Adjuvant Chemotherapy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Chemotherapy that is administered subsequent to the main treatment plan to minimize or prevent disease recurrence.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C35018,Septic Shock,Systemic Septic Shock|Septic Shock,A state of acute circulatory failure characterized by persistent arterial hypotension despite adequate fluid resuscitation or by tissue hypoperfusion unexplained by other causes.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Systemic Septic Shock|Septic Shock,,,,NCIT:C35018,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Septic Shock,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A state of acute circulatory failure characterized by persistent arterial hypotension despite adequate fluid resuscitation or by tissue hypoperfusion unexplained by other causes.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000020,lake,tarn|open water|catch basin,A body of water or other liquid of considerable size contained in a depression on a landmass.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,TGN:21115|TGN:21114|SWEETRealm:Lake|SPIRE:Lake_or_pond|LTER:278|Geonames:H.LKS|Geonames:H.LK|FTT:909|FTT:704|FTT:221|EcoLexicon:lake,,,,,,,,,,,,,,,,,,,,,,,,,,tarn|open water|catch basin,,,ENVO:00000020,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,envoPolar,,,,,,,,lake,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A body of water or other liquid of considerable size contained in a depression on a landmass.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03500034,cellulose acetate surface,,CA: thermoplastic material made by the esterification of cellulose with acetic anhydride and acetic acid.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=N0034,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03500034,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,cellulose acetate surface,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CA: thermoplastic material made by the esterification of cellulose with acetic anhydride and acetic acid.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C43209,Glass Vial,"VIAL, GLASS|Glass Vial",A glass container designed for use with parenteral drug products.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"VIAL, GLASS|Glass Vial",,,,NCIT:C43209,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Glass Vial,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A glass container designed for use with parenteral drug products.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100089,complete Kawasaki disease,complete Kawasaki syndrome,"A diagnosis of Kawasaki disease (KD) based on the fulfillment of a set of clinical signs including fever of five or more days' duration with at least four of the following five signs: (i) bilateral conjunctival injection, (ii) cervical lymphadenopathy, (iii) polymorphous skin rash, (iv) changes in the lips or oral mucosa, and (v) changes of the distal extremities.Usual laboratory findings in KD patients include elevated erythrocyte sedimentation rate and C-reactive protein, hypoalbuminemeia, elevated serum hepatic transaminases and leukocytosis with thrombocytosis noted later in the course of the illness.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,complete Kawasaki syndrome,,,,GENEPIO:0100089,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,complete Kawasaki disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A diagnosis of Kawasaki disease (KD) based on the fulfillment of a set of clinical signs including fever of five or more days' duration with at least four of the following five signs: (i) bilateral conjunctival injection, (ii) cervical lymphadenopathy, (iii) polymorphous skin rash, (iv) changes in the lips or oral mucosa, and (v) changes of the distal extremities.Usual laboratory findings in KD patients include elevated erythrocyte sedimentation rate and C-reactive protein, hypoalbuminemeia, elevated serum hepatic transaminases and leukocytosis with thrombocytosis noted later in the course of the illness.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100703,experimental parameters documentation tag,experimental parameters documentation data type,A documentation data tag which indicates the presence of data that describes experimental parameters.,FALSE,,,,,,,experimental parameters documentation,,,,,,,Example Guidance: Use this tag to indicate additional data is available that provides documentation describing parameters of the experiment.,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,experimental parameters documentation data type,,,,GENEPIO:0100703,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-05-18T19:08:34.869Z,,,,,,,,,,,,,,,,,,,experimental parameters documentation tag,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A documentation data tag which indicates the presence of data that describes experimental parameters.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001891,alphanumeric phrase,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001891,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,alphanumeric phrase,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,/^([a-zAA-Z0-9 _-')*$/,
http://purl.obolibrary.org/obo/CHEBI_2637,amikacin,,An amino cyclitol glycoside that is kanamycin A acylated at the N-1 position by a 4-amino-2-hydroxybutyryl group.,FALSE,,,,,,,Amk|Am,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:2637,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,amikacin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An amino cyclitol glycoside that is kanamycin A acylated at the N-1 position by a 4-amino-2-hydroxybutyryl group.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000086,beef top blade steak (raw),,A raw beef top blade steak.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000086,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef top blade steak (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef top blade steak.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00002756,"populated place, Japan",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00002756,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Japan",http://purl.obolibrary.org/obo/GAZ_00002747,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03315665,meat (prepared),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://bioregistry.io/reference/siren:F15665,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03315665,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,meat (prepared),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000359,veal breast (raw),,A raw veal breast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000359,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,veal breast (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw veal breast.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530139,tranche (meat cut),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0139,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530139,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,tranche (meat cut),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03430101,medium ground and sifted (bolted),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=E0101,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03430101,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,medium ground and sifted (bolted),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001470,exposure event record,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001470,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,exposure event record,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530024,round or leg (meat cut),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0024,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530024,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,round or leg (meat cut),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00003885,brewery,,"A brewery is a building in which alcoholic beverages are produced by brewing, that is, steeping a starch source (commonly cereal grains) in water and fermenting the resulting sweet liquid with yeast. At times, the products are also sold from the brewery.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00003885,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,brewery,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A brewery is a building in which alcoholic beverages are produced by brewing, that is, steeping a starch source (commonly cereal grains) in water and fermenting the resulting sweet liquid with yeast. At times, the products are also sold from the brewery.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0016481,bronchial lymph node,,A lymph node that is part of a bronchus.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C1305372|NCIT:C32232|MA:0003078,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0016481,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,bronchial lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A lymph node that is part of a bronchus.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000213,beef ribeye petite roast,,A smaller alternative to the ribeye roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000213,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef ribeye petite roast,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A smaller alternative to the ribeye roast.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100232,travelled on ground transport exposure process,,A process occuring within or in the vicinity of ground transport that exposes the recipient organism to a material entity.,FALSE,,,,,,,Travelled on Ground Transport,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100232,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,travelled on ground transport exposure process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A process occuring within or in the vicinity of ground transport that exposes the recipient organism to a material entity.,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0024880,metastatic malignant neoplasm,"metastatic neoplasm, malignant|metastatic malignant neoplasm|metastatic cancer|malignant metastatic neoplasm",A malignant tumor that has spread from its original (primary) site of growth to another site close to or distant from the primary site.,FALSE,,,,,,,,,,,,,,"Note that we currently treat secondary neoplasms as being neoplastic diseases that are derived from neoplasm; classes such as 'neoplasm', 'carcinoma' are implicitly primary. This may change in future.",,,,,,,,,,,,,,,,,,icd11.foundation:1399468320|UMLS:C2939419|NCIT:C36263|MEDGEN:422475,,,,,,,,,,,,,,,,,,,,,,,,,"metastatic neoplasm, malignant|metastatic malignant neoplasm|metastatic cancer|malignant metastatic neoplasm",,,,MONDO:0024880,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,metastatic malignant neoplasm,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A malignant tumor that has spread from its original (primary) site of growth to another site close to or distant from the primary site.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_27171,organic heterobicyclic compound,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:27171,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,organic heterobicyclic compound,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470160,ultra high pressure sterilization,,"The process of holding food at a high pressure, normally greater than 1000 bar, which leads to sterilization. Example: Fruit juice, jam.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0160,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470160,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,ultra high pressure sterilization,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The process of holding food at a high pressure, normally greater than 1000 bar, which leads to sterilization. Example: Fruit juice, jam.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001646,data protection role,,A data protection role is a role (or user permission) that a user has with respect to particular data.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,A data server may be able to provide a protected(modified) dataset with metadata indicating what parts have a protection role with respect to the user requesting this information. A data protection role would be inherited from a user's relation to an entitiy to the entity's components or subclasses.,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001646,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,data protection role,,,,,,,,,,,,,,,,,,,,,,https://community.i2b2.org/wiki/display/ServerSideDesign/DATA+PERMISSION,,,,,,Damion Dooley,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,A data protection role is a role (or user permission) that a user has with respect to particular data.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001994,library construction protocol,,Free form text describing the protocol by which the sequencing library was constructed.,FALSE,,,,,,,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/books/NBK54984/table/SRA_Glossary_BK.T._library_descriptor_te/?report=objectonly,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001994,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,library construction protocol,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,Free form text describing the protocol by which the sequencing library was constructed.,,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000587,percentage of variance,,"the percentage of variance is an output of principal component analysis (PCRA), which is obtained by forming the ratio of an eigen-value divided by the sum of all eigen-values. This produces a ""percentage of variance"" for each eigen-vector.",FALSE,,,,,,,,,,,,,,,,,,,,,"adapted from:
https://stats.stackexchange.com/questions/31908/what-is-percentage-of-variance-in-pca",,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000587,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,percentage of variance,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra,,,,"the percentage of variance is an output of principal component analysis (PCRA), which is obtained by forming the ratio of an eigen-value divided by the sum of all eigen-values. This produces a ""percentage of variance"" for each eigen-vector.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000251,lamb shoulder arm chop,,A lamb chop that is derived from the arm portion of the lamb shoulder primal.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000251,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lamb shoulder arm chop,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A lamb chop that is derived from the arm portion of the lamb shoulder primal.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001677,contact specification - patient,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0001679,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001677,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/OBI_0000093,,,,,,contact specification - patient,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_23677,diazole,,An azole that is either one of a pair of heterocyclic organic compounds comprising three carbon atoms and two nitrogen atoms arranged in a ring.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:23677,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,diazole,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An azole that is either one of a pair of heterocyclic organic compounds comprising three carbon atoms and two nitrogen atoms arranged in a ring.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001261,passage number,passage number,A data field which describes the number of passages.,FALSE,,,,,,,PCDS:passage_number,,,,,,,"PCDS: Provide number of known passages. If not passaged, put 'not applicable'",,,,,,,,,,,,,,PCDS: 3,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,passage number,passage number slot,,,,GENEPIO:0001261,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,passage number,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the number of passages.,,PCDS: Number of passages.,,,,,,
http://purl.obolibrary.org/obo/FOODON_03480022,packed in acidified salt brine,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=K0022,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03480022,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,packed in acidified salt brine,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C15657,Blood Treatment,Therapeutic Procedures Hematopoietic System|Hematologic Procedure|Blood Treatment,"General term for hemodialysis, plasmapheresis, blood transfusions, and related procedures involving autologous removal, alteration, and replacement of patients' blood or blood components.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Therapeutic Procedures Hematopoietic System|Hematologic Procedure|Blood Treatment,,,,NCIT:C15657,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Blood Treatment,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"General term for hemodialysis, plasmapheresis, blood transfusions, and related procedures involving autologous removal, alteration, and replacement of patients' blood or blood components.",,,,,,,,
http://purl.obolibrary.org/obo/HP_0001919,Acute kidney injury,Acute renal failure|Acute kidney failure|AKI,"Sudden loss of renal function, as manifested by decreased urine production, and a rise in serum creatinine or blood urea nitrogen concentration (azotemia).",FALSE,,,,,,,,,,,,,,"Acute renal failure is usually classified into prerenal (response to severe volume depletion), intrinsic (response to acute cytotoxic, ischemic, or inflammatory insults) and postrenal (response to obstruction of the passage of urine) etiologies.",,,,,,,,,,,,,,,,,,UMLS:C2609414|UMLS:C0022660|SNOMEDCT_US:14669001|SNOMEDCT_US:14350001000004108,,,,,,,,,,,,,,,,,,,,,,,,,Acute renal failure|Acute kidney failure|AKI,,,,HP:0001919,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Acute kidney injury,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Sudden loss of renal function, as manifested by decreased urine production, and a rise in serum creatinine or blood urea nitrogen concentration (azotemia).",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00002882,beef short rib,,"A beef cut that is derived from the 6th, 7th and 8th rib of the rib primal.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00002882,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef short rib,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A beef cut that is derived from the 6th, 7th and 8th rib of the rib primal.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100749,turbidity measurement tag,turbidity measurement data type,A physical characterization data tag which indicates the presence of data that describes turbidity measurement.,FALSE,,,,,,,turbidity measurement,,,,,,,"Example Guidance: Use this tag to indicate additional data is available that provides the determination of the sample opacity, including the units of measurement.",,,,,,,,,,,"http://purl.obolibrary.org/obo/NCIT_C74723 used as a partial source for the ""Example Guidance"".",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,turbidity measurement data type,,,,GENEPIO:0100749,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-5275-8866,2023-05-18T19:08:34.869Z,,,,,,,,,,,,,,,,,,,turbidity measurement tag,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A physical characterization data tag which indicates the presence of data that describes turbidity measurement.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000184,beef outside skirt steak (raw),,A raw beef outside skirt steak.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000184,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef outside skirt steak (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef outside skirt steak.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03460289,curing or aging 2 weeks to 1 month,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=H0289,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03460289,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,curing or aging 2 weeks to 1 month,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530119,restaurant or fast food preparation process,,The process of preparing and serving food in a restaurant or fast food outlet.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0119,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530119,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,restaurant or fast food preparation process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The process of preparing and serving food in a restaurant or fast food outlet.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_2957,pulmonary tuberculosis,,"A tuberculosis that is a contagious disease located_in lungs. The infection has_symptom fever, has_symptom cough, has_symptom difficulty in breathing, has_symptom inflammatory infiltrations, has_symptom formation of tubercles, has_symptom caseation, has_symptom pleural effusion, and has_symptom fibrosis.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:2957,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,pulmonary tuberculosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A tuberculosis that is a contagious disease located_in lungs. The infection has_symptom fever, has_symptom cough, has_symptom difficulty in breathing, has_symptom inflammatory infiltrations, has_symptom formation of tubercles, has_symptom caseation, has_symptom pleural effusion, and has_symptom fibrosis.",,,,,,,,
http://purl.obolibrary.org/obo/UO_1010030,gallon based unit,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:1010030,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,gallon based unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001848,progressing well health status,,,FALSE,,,,,http://purl.obolibrary.org/obo/GENEPIO_0001847,,,,http://purl.obolibrary.org/obo/GENEPIO_0001840,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001848,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,progressing well health status,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0022034,lentivirus infection,,Virus diseases caused by the Lentivirus genus. They are multi-organ diseases characterized by long incubation periods and persistent infection.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0079680|MESH:D016180|MEDGEN:38233|EFO:1001357,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MONDO:0022034,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,lentivirus infection,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Virus diseases caused by the Lentivirus genus. They are multi-organ diseases characterized by long incubation periods and persistent infection.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100207,intensive care unit exposure process,ICU,A process occuring within or in the vicinity of an ICU that exposes the recipient organism to a material entity.,FALSE,,,,,,,ICU,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,ICU,,,,GENEPIO:0100207,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,intensive care unit exposure process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A process occuring within or in the vicinity of an ICU that exposes the recipient organism to a material entity.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0037788,left occipital lymph node,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:232554,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0037788,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,left occipital lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0037787,right occipital lymph node,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:232552,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0037787,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,right occipital lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0037789,right apical axillary lymph node,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:232558,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0037789,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,right apical axillary lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000242,lamb shoulder blade (raw),,A raw lamb shoulder blade cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000242,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lamb shoulder blade (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw lamb shoulder blade cut.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000233,beef cowboy steak,,"A tender, bone-in steak with a frenched rib presentation.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000233,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef cowboy steak,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A tender, bone-in steak with a frenched rib presentation.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000061,beef country-style rib (raw),,A raw beef country-style rib.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000061,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef country-style rib (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef country-style rib.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0011968,Feeding difficulties,Poor feeding|Feeding problems|Feeding difficulties|Decreased oral intake,"Impaired ability to eat related to problems gathering food and getting ready to suck, chew, or swallow it.",FALSE,,,,,,,,,,,,,,"Difficulties with eating and drinking, resulting in decreased oral nutrition",,,,,,,,,,,,,,,,,,UMLS:C0232466|SNOMEDCT_US:78164000,,,,,,,,,,,,,,,,,,,,,,,,,Poor feeding|Feeding problems|Feeding difficulties|Decreased oral intake,,,,HP:0011968,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,http://purl.oboInOwllibrary.org/oboInOwl/hp#hposlim_core,,,,,,,,Feeding difficulties,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Impaired ability to eat related to problems gathering food and getting ready to suck, chew, or swallow it.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001631,contig NG50,,The NG50 length is the same as the N50 length except that the length of the reference genome is used in the calculation rather than the assembly genome size.,FALSE,,,,,,,,,,,,,,"""Note that N50 is calculated in the context of the assembly size rather than the genome size. Therefore, comparisons of N50 values derived from assemblies of significantly different lengths are usually not informative, even if for the same genome. To address this, the authors of the Assemblathon competition derived a new measure called NG50. The NG50 statistic is the same as N50 except that it is 50% of the known or estimated genome size that must be of the NG50 length or longer. This allows for meaningful comparisons between different assemblies. In the typical case that the assembly size is not more than the genome size, the NG50 statistic will not be more than the N50 statistic."" - wikipedia",,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001631,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,contig NG50,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,The NG50 length is the same as the N50 length except that the length of the reference genome is used in the calculation rather than the assembly genome size.,,,,,,,,
http://purl.obolibrary.org/obo/IDO_0000629,host role,,A role borne by an organism in virtue of the fact that it's extended organism contains a material entity other than the organism.,FALSE,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IDO_0000531,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,IDO:0000629,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ido.owl,,,,,,,,,host role,,,,,,,,,,,,,,,,,,,,,,,,,,,,Lindsay Cowell|Alexander Diehl|Albert Goldfain,,,,A role borne by an organism in virtue of the fact that it's extended organism contains a material entity other than the organism.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001430,line list object,,"A line list is a collection of suspected or known disease outbreak cases.  It may also include details about healthy patients associated with an exposure event (picnic, concert etc.) who have been interviewed in order to compare food intake, assess risk factors, etc.  

Note that the health status of people associated with an exposure event can change from healthy or unknown status, to ill patient.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001430,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,line list object,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"A line list is a collection of suspected or known disease outbreak cases.  It may also include details about healthy patients associated with an exposure event (picnic, concert etc.) who have been interviewed in order to compare food intake, assess risk factors, etc.  

Note that the health status of people associated with an exposure event can change from healthy or unknown status, to ill patient.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03500028,Cryovac bag plastic surface,,"A surface of a Cryovac bag, a shrinkable version of pvdc used for vacuum packaging, e.g. of red meat.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=N0028,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03500028,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,Cryovac bag plastic surface,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A surface of a Cryovac bag, a shrinkable version of pvdc used for vacuum packaging, e.g. of red meat.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000358,veal breast,,A veal primal cut that consist of the plate and brisket portion of the forequarter (intact) and shall contain 11 ribs.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000358,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,veal breast,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A veal primal cut that consist of the plate and brisket portion of the forequarter (intact) and shall contain 11 ribs.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_33579,main group molecular entity,,"A molecular entity containing one or more atoms from any of groups 1, 2, 13, 14, 15, 16, 17, and 18 of the periodic table.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:33579,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,main group molecular entity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A molecular entity containing one or more atoms from any of groups 1, 2, 13, 14, 15, 16, 17, and 18 of the periodic table.",,,,,,,,
http://purl.obolibrary.org/obo/HP_0031258,Delirium,Altered consciousness or cognition,A state of sudden and severe confusion.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Altered consciousness or cognition,,,,HP:0031258,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Delirium,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A state of sudden and severe confusion.,,,,,,,,
http://purl.obolibrary.org/obo/BTO_0002035,U-251MG cell,,Human glioma cell line. Morphology: glial; Species: human; Tumor: glioma.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,BTO:0002035,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/bto.owl,,,,,,,,,U-251MG cell,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Human glioma cell line. Morphology: glial; Species: human; Tumor: glioma.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100260,housekeeper role,,A role inhering in a person that is realized when the bearer is an individual who performs cleaning duties and/or is responsible for the supervision of cleaning staff.,FALSE,,,,,,,Housekeeper,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Housekeeper_(domestic_worker),,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100260,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,housekeeper role,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A role inhering in a person that is realized when the bearer is an individual who performs cleaning duties and/or is responsible for the supervision of cleaning staff.,,,,,,,,
http://www.ebi.ac.uk/efo/EFO_0000683,replicate,,A role played by a a biological sample in the context of an experiment where the intent is that biological or technical variation is measured.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCIt:C28038,,,,,,,,,,,,,,,,,,,,,,,,,,,,,efo:EFO_0000683,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,replicate,,,,,,,,,,,,,,,,,,,,,,,,,,,,James Malone,,,,A role played by a a biological sample in the context of an experiment where the intent is that biological or technical variation is measured.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000001,mud,,"An environmental material which is a liquid or semi-liquid mixture of water and some combination of soil, silt, and clay particles.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Mud|SWEETRealm:Mud|LTER:356|EcoLexicon:mud,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01000001,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,mud,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An environmental material which is a liquid or semi-liquid mixture of water and some combination of soil, silt, and clay particles.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02021760,pork roast (boneless),,A boneless pork roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02021760,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pork roast (boneless),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A boneless pork roast.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000245,lamb shoulder blade chop,,A lamb chop that is derived from the blade portion of the lamb shoulder primal.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000245,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lamb shoulder blade chop,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A lamb chop that is derived from the blade portion of the lamb shoulder primal.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100106,Illumina Genome Analyzer,,"A DNA sequencer manufactured by Solexa as one of its first sequencer lines, launched in 2006, and capable of sequencing 1 gigabase (Gb) of data in a single run.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100106,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,Illumina Genome Analyzer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A DNA sequencer manufactured by Solexa as one of its first sequencer lines, launched in 2006, and capable of sequencing 1 gigabase (Gb) of data in a single run.",,,,,,,,
http://www.ebi.ac.uk/efo/EFO_0004318,smoking behavior,smoking,Inhaling and exhaling the smoke of tobacco or something similar to tobacco.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCIt:C20134|MESH:D012907,,,,,,,,,,,,,,,,,,,,,,,,,smoking,,,,efo:EFO_0004318,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,smoking behavior,,,,,,,,,,,,,,,,,,,,,,,,,,,,Dani Welter,,,,Inhaling and exhaling the smoke of tobacco or something similar to tobacco.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_33582,carbon group molecular entity,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:33582,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,carbon group molecular entity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00004543,buffalo sub-primal cut,,A smaller cut of meat that is obtained from the larger primal cut of a buffalo.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00004543,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,buffalo sub-primal cut,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A smaller cut of meat that is obtained from the larger primal cut of a buffalo.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100938,n50,N50 value,"A data field which describes the length of the shortest read that, together with other reads, represents at least 50% of the nucleotides in a set of sequences.",FALSE,,,,,,,PCDS:n50,,,,,,,PCDS: Provide the N50 value in Mb.,,,,,,,,,,,,,,PCDS: 150,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,N50 value,N50 value slot,,,,GENEPIO:0100938,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,n50,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A data field which describes the length of the shortest read that, together with other reads, represents at least 50% of the nucleotides in a set of sequences.",,"PCDS: The length of the shortest read that, together with other reads, represents at least 50% of the nucleotides in a set of sequences.",,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001651,INSDC institution code,,An INSDC institution code is an identifier of an organization from a list of sequence repository organizations managed by INSDC.,FALSE,,,,,,,,,,,,,,,,,,,,,http://www.insdc.org/controlled-vocabulary-culturecollection-qualifier,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001651,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,INSDC institution code,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,An INSDC institution code is an identifier of an organization from a list of sequence repository organizations managed by INSDC.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000043,bacteria density,,An environmental datum which describes the number of bacteria in a sample.,FALSE,,,,,,,,,,,,,,,,,,,,,GROUP: Environment Canada Metadata,,,,,,,OD reading or cfu's or cells per millilitre,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000043,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,,,,,,,bacteria density,,,,,Environmental Isolate,,,,,,,,,,,,,,,,,,,,,,Density of bacteria in sample,,,Environment Canada Metadata,,An environmental datum which describes the number of bacteria in a sample.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_38443,1-benzopyran,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:38443,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,1-benzopyran,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_68452,azole,,"Any monocyclic heteroarene consisting of a five-membered ring containing nitrogen. Azoles can also contain one or more other non-carbon atoms, such as nitrogen, sulfur or oxygen.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:68452,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,azole,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Any monocyclic heteroarene consisting of a five-membered ring containing nitrogen. Azoles can also contain one or more other non-carbon atoms, such as nitrogen, sulfur or oxygen.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100279,variant under monitoring (SARS-CoV-2),Variant Being Monitored|VUM|VBM,"A variant designation which is 1) a variant of the Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2), 2) containing genetic mutates that may increase binding affinity to human cells, 3) linked to rapid spread in human populations, 4) is being monitored, and 5) denoted as a lower risk than a Variant of Interest (VOI).",FALSE,,,,,,,Variant Under Monitoring (VUM),,,,,,,PHA4GE Definition: A category used for indicating that a variant of the Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) containing genetic mutations that may increase binding affinity to human cells and linked to rapid spread in human populations is being monitored. This category denotes less risk than a Variant of Interest (VOI).,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,Variant Being Monitored|VUM|VBM,,,,GENEPIO:0100279,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,variant under monitoring (SARS-CoV-2),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A variant designation which is 1) a variant of the Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2), 2) containing genetic mutates that may increase binding affinity to human cells, 3) linked to rapid spread in human populations, 4) is being monitored, and 5) denoted as a lower risk than a Variant of Interest (VOI).",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02010309,animal retail cut (raw),,A raw animal retail cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02010309,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,animal retail cut (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw animal retail cut.,,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000258,variable,,"a variable is a data item which can assume any of a set of values, either as determined by an agent or as randomly occuring through observation.",FALSE,,,,,,,,,,,,,,,,,,,,,"adapted from wolfram-alpha (http://www.wolframalpha.com/input/?i=variable) definition 2.

and from Oxford English Dictionary:
http://www.oed.com/view/Entry/221514?redirectedFrom=variable#eid, definition B,1|STATO",,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000258,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,variable,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra|Alejandra Gonzalez-Beltran|Orlaith Burke,,,,"a variable is a data item which can assume any of a set of values, either as determined by an agent or as randomly occuring through observation.",,,,variable type,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100072,pseudo-chilblains on fingers,covid fingers,Inflammatory chilblain-like nodules on the hands and/or fingers.,FALSE,,,,,,,Pseudo-chilblains on fingers (covid fingers),,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,covid fingers,,,,GENEPIO:0100072,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,pseudo-chilblains on fingers,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Inflammatory chilblain-like nodules on the hands and/or fingers.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000368,veal shoulder blade,,A veal meat cut in which the cut location is the full length of the Scapula or blade bone and includes the muscle groups above and below the Scapula.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000368,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,veal shoulder blade,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A veal meat cut in which the cut location is the full length of the Scapula or blade bone and includes the muscle groups above and below the Scapula.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038882,posterior diaphragmatic lymph node,posterior diaphragmatic node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:5941,,,,,,,,,,,,,,,,,,,,,,,,,posterior diaphragmatic node,,,,UBERON:0038882,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,posterior diaphragmatic lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038888,posterior mediastinal lymph node,posterior mediastinal node|nodus mediastinale posteriore lymphaticus,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:5947,,,,,,,,,,,,,,,,,,,,,,,,,posterior mediastinal node|nodus mediastinale posteriore lymphaticus,,,,UBERON:0038888,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,posterior mediastinal lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038885,brachiocephalic lymph node,innominate lymph node|brachiocephalic node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:5944,,,,,,,,,,,,,,,,,,,,,,,,,innominate lymph node|brachiocephalic node,,,,UBERON:0038885,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,brachiocephalic lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001504,variant evidence,variant evidence,A data field which describes the evidence used to make the variant determination.,FALSE,,,,,,,PCDS:variant_evidence,,,,,,,PCDS: Select whether the sample was screened using RT-qPCR or by sequencing from the pick list.,,,,,,,,,,,,,,PCDS: RT-qPCR,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,variant evidence,variant evidence slot,,,,GENEPIO:0001504,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,variant evidence,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the evidence used to make the variant determination.,,PCDS: The evidence used to make the variant determination.,,,,,,
http://purl.obolibrary.org/obo/PATO_0000070,amount,quantitative|presence or absence in organism,The number of entities of this type that are part of the whole organism.,FALSE,,,,,,,,,,,,,,"This term was originally named ""presence"". It has been renamed to reduce ambiguity. Consider annotating with the reciprocal relation,PATO:0001555, has_number_of. For example, rather than E=fin ray Q=count in organism C=10, say E=organism Q=has number of E2= fin ray C=10.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PATO:0001226|PATO:0001169|PATO:0000071|PATO:0000053,,quantitative|presence or absence in organism,,,,PATO:0000070,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/pato.owl,http://purl.oboInOwllibrary.org/oboInOwl/pato#attribute_slim,,,,,,,,amount,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The number of entities of this type that are part of the whole organism.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001054,isolate passage history datum,,"An isolate passage history is a record of the cyclic growth process that led to it, including number of times its was put through the process, and the method used.",FALSE,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0001835,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001054,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,isolate passage history datum,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"An isolate passage history is a record of the cyclic growth process that led to it, including number of times its was put through the process, and the method used.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000003,beef bottom round (raw),,A raw beef bottom round cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000003,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef bottom round (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef bottom round cut.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001954,MSLL method,,Methylation Spanning Linking Library,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI SRA: MSLL,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001954,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MSLL method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Methylation Spanning Linking Library,,,,,,,,
http://purl.obolibrary.org/obo/HP_0010930,Abnormal blood monovalent inorganic cation concentration,Abnormality of monovalent inorganic cation homeostasis,An abnormality of monovalent inorganic cation homeostasis.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4023645,,,,,,,,,,,,,,,,,,,,,,,,,Abnormality of monovalent inorganic cation homeostasis,,,,HP:0010930,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal blood monovalent inorganic cation concentration,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An abnormality of monovalent inorganic cation homeostasis.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0010935,Abnormality of the upper urinary tract,Abnormality of the upper urinary tract,An abnormality of the upper urinary tract.,FALSE,,,,,,,,,,,,,,The upper urinary tract is a subdivision of urinary system which consists of the kidney and the ureters.,,,,,,,,,,,,,,,,,,UMLS:C4023641,,,,,,,,,,,,,,,,,,,,,,,,,Abnormality of the upper urinary tract,,,,HP:0010935,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormality of the upper urinary tract,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An abnormality of the upper urinary tract.,,,,,,,,
http://purl.obolibrary.org/obo/GO_0044409,symbiont entry into host,penetration into host via a specialized structure during symbiotic interaction|penetration into host via a specialized structure|entry into host via enzymatic degradation of host cuticle|entry into host via enzymatic degradation of host anatomical structure|entry into host via a specialized structure during symbiotic interaction|entry into host cell via penetration peg|entry into cell of other organism during symbiotic interaction,"Penetration by an organism into the body, tissues, or cells of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.|Entry of a symbiont into the body, tissues, or cells of a host organism as part of the symbiont life cycle. The host is defined as the larger of the organisms involved in a symbiotic interaction.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Reactome:R-HSA-173107,,,,,,,,,,,,,,,,,,,,,,,GO:0085028|GO:0085027|GO:0075052|GO:0051830|GO:0051828|GO:0051806|GO:0044411|GO:0030260,,penetration into host|invasion of host|invasion into host|host penetration|host invasion|entry into host,penetration into host via a specialized structure during symbiotic interaction|penetration into host via a specialized structure|entry into host via enzymatic degradation of host cuticle|entry into host via enzymatic degradation of host anatomical structure|entry into host via a specialized structure during symbiotic interaction|entry into host cell via penetration peg|entry into cell of other organism during symbiotic interaction,,,GO:0044409,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/apollo_sv.owl,http://purl.oboInOwllibrary.org/oboInOwl/go#goslim_virus,,,,,,,,symbiont entry into host|entry into host,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Penetration by an organism into the body, tissues, or cells of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.|Entry of a symbiont into the body, tissues, or cells of a host organism as part of the symbiont life cycle. The host is defined as the larger of the organisms involved in a symbiotic interaction.",,,,,,,,
http://purl.obolibrary.org/obo/GO_0044403,biological process involved in symbiotic interaction,parasitism|host-pathogen interaction|commensalism,"A process carried out by gene products in an organism that enable the organism to engage in a symbiotic relationship, a more or less intimate association, with another organism. The various forms of symbiosis include parasitism, in which the association is disadvantageous or destructive to one of the organisms; mutualism, in which the association is advantageous, or often necessary to one or both and not harmful to either; and commensalism, in which one member of the association benefits while the other is not affected. However, mutualism, parasitism, and commensalism are often not discrete categories of interactions and should rather be perceived as a continuum of interaction ranging from parasitism to mutualism. In fact, the direction of a symbiotic interaction can change during the lifetime of the symbionts due to developmental changes as well as changes in the biotic/abiotic environment in which the interaction occurs. Microscopic symbionts are often referred to as endosymbionts.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GO:0085031|GO:0072519|GO:0044404|GO:0043298,,,parasitism|host-pathogen interaction|commensalism,,,GO:0044403,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/apollo_sv.owl,http://purl.oboInOwllibrary.org/oboInOwl/go#goslim_chembl,,,,,,,,biological process involved in symbiotic interaction,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A process carried out by gene products in an organism that enable the organism to engage in a symbiotic relationship, a more or less intimate association, with another organism. The various forms of symbiosis include parasitism, in which the association is disadvantageous or destructive to one of the organisms; mutualism, in which the association is advantageous, or often necessary to one or both and not harmful to either; and commensalism, in which one member of the association benefits while the other is not affected. However, mutualism, parasitism, and commensalism are often not discrete categories of interactions and should rather be perceived as a continuum of interaction ranging from parasitism to mutualism. In fact, the direction of a symbiotic interaction can change during the lifetime of the symbionts due to developmental changes as well as changes in the biotic/abiotic environment in which the interaction occurs. Microscopic symbionts are often referred to as endosymbionts.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03500036,food-grade plastic surface,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=N0036,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03500036,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food-grade plastic surface,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100764,sample collection time,,A sample collection data field which describes the time the sample was collected.,FALSE,,,,,,,PCDS:sample_collection_time,,,,,,,,,,,,,,,,,,,,,,,,uncurated,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100764,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-21T01:14:47.111Z,,,,,,,,,,,,,,,,,,,sample collection time,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A sample collection data field which describes the time the sample was collected.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100484,experiment intervention details,experiment_intervention_details|experiment intervention details,a data field which describes the details of the experimental intervention applied in the food production system.,FALSE,,,,,,,PCDS:experiment_intervention_details,,,,,,,"PCDS: If an experimental intervention was applied in the survey, provide details in this field as free text.",,,,,,,,,,,,,,PCDS: 2% cranberry solution mixed in feed,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,experiment_intervention_details|experiment intervention details,experiment intervention details slot,,,,GENEPIO:0100484,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-12-22T00:55:53.808Z,,,,,,,,,,,,,,,,,,,experiment intervention details,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,a data field which describes the details of the experimental intervention applied in the food production system.,,PCDS: The details of the experimental intervention applied in the food production system.,,,,,,
http://purl.obolibrary.org/obo/DOID_0060904,legume allergy,,A fruit allergy triggered by Fabaceae (legume) plant fruit or seed food product.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0060904,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,legume allergy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A fruit allergy triggered by Fabaceae (legume) plant fruit or seed food product.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000097,obsolete: NCBI BioSample data item,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000227,,,,,,,,,,,,,,,,,,,GENEPIO:0000097,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: NCBI BioSample data item,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,http://purl.obolibrary.org/obo/GENEPIO_0001835,,,,,,,,,,,
http://purl.obolibrary.org/obo/APOLLO_SV_00000033,counting,,The planned process of finding the number of elements in a finite set of objects.,FALSE,,,,,,,,,,,,,,,,,,,,,http://en.wikipedia.org/wiki/Counting,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,APOLLO_SV:00000033,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/apollo_sv.owl,,,,,,,,,counting,,,,,,,,,,,,,,,,,,,,,,,,,,,,Mathias Brochhausen,,,,The planned process of finding the number of elements in a finite set of objects.,,,,,,,,
http://purl.obolibrary.org/obo/APOLLO_SV_00000031,simulated population,,A simulation of a population or populations of organisms of a particular biological taxon that simulates a particular type of event or types of event that occur in a specified time interval.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,APOLLO_SV:00000031,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/apollo_sv.owl,,,,,,,,,simulated population,,,,,,,,,,,,,,,,,,,,,,,,,,,,Mathias Brochhausen,,,,A simulation of a population or populations of organisms of a particular biological taxon that simulates a particular type of event or types of event that occur in a specified time interval.,,,,,,,,
http://purl.obolibrary.org/obo/APOLLO_SV_00000032,count,,A measurement datum that is the output of counting.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,APOLLO_SV:00000032,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/apollo_sv.owl,,,,,,,,,count,,,,,,,,,,,,,,,,,,,,,,,,,,,,Mathias Brochhausen,,,,A measurement datum that is the output of counting.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000039,beef eye of round,,"A beef cut that is an elongated muscle located in the center of the beef round cut, and thus is named “Eye.”",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000039,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef eye of round,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A beef cut that is an elongated muscle located in the center of the beef round cut, and thus is named “Eye.”",,,,,,,,
http://purl.obolibrary.org/obo/HP_0000598,Abnormality of the ear,Ear anomaly|Abnormality of the ear,An abnormality of the ear.,FALSE,,,,,,,,,,,,,,Either a morphological abnormality or hearing deficit. This should be split more cleanly in the future.,,,,,,,,,,,,,,,,,,UMLS:C0266589|SNOMEDCT_US:275259005,,,,,,,,,,,,,,,,,,,,,,,,,Ear anomaly|Abnormality of the ear,,,,HP:0000598,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,http://purl.oboInOwllibrary.org/oboInOwl/hp#hposlim_core,,,,,,,,Abnormality of the ear,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An abnormality of the ear.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001550,resolving health trend,recovering|improving,To restore to the normal state after some pathologic process.,FALSE,,,,,http://purl.obolibrary.org/obo/GENEPIO_0002026,,,,,,,,,,,,,,,,"Dorland's Illustrated Medical Dictionary, 30th ed.",,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,recovering|improving,,,,GENEPIO:0001550,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,resolving health trend,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,To restore to the normal state after some pathologic process.,,,,,,,,
http://purl.obolibrary.org/obo/COB_0000049,nucleic acid chain,,A molecule that consists of nucleotides (unmodified nucleotide residues and/or modified nucleotide residues) linked by phosphodiester bonds or derivatives of such bonds.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,COB:0000049,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/cob.owl,,,,,,,,,nucleic acid chain,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A molecule that consists of nucleotides (unmodified nucleotide residues and/or modified nucleotide residues) linked by phosphodiester bonds or derivatives of such bonds.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100659,PHA4GE genomics specification,Public Health Alliance for Genomic Epidemiology specification,A data specification established by the Public Health Alliance for Genomic Epidemiology (PHA4GE) for genomics contextual data (metadata) harmonization and curation.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,Public Health Alliance for Genomic Epidemiology specification,,,,GENEPIO:0100659,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788,2023-01-22T23:12:40.795Z,,,,,,,,,,,,,,,,,,,PHA4GE genomics specification,,,,,,,,,,,,,,,,,,,,,,GitHub: https://github.com/pha4ge,,,,,,,,,,A data specification established by the Public Health Alliance for Genomic Epidemiology (PHA4GE) for genomics contextual data (metadata) harmonization and curation.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100083,variant of interest (SARS-CoV-2),VOI,"A variant designation which is 1) a variant of the Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2), 2) demonstrated to have genetic mutations that increase binding affinity to human cells, 3) linked to rapid spread in human populations, and 4) is under surveillance.",FALSE,,,,,,,Variant of Interest (VOI),,,,,,,PHA4GE Definition: A category used for indicating that a variant of the Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) containing genetic mutations demonstrated to increase binding affinity to human cells and linked to rapid spread in human populations is under surveillance.,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,VOI,,,,GENEPIO:0100083,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,variant of interest (SARS-CoV-2),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A variant designation which is 1) a variant of the Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2), 2) demonstrated to have genetic mutations that increase binding affinity to human cells, 3) linked to rapid spread in human populations, and 4) is under surveillance.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100246,indirect contact,,A type of contact in which an individual does not come in direct contact with a source of infection.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,Contact via airborne transmission or contact with contaminated surfaces.,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100246,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,indirect contact,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A type of contact in which an individual does not come in direct contact with a source of infection.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_36357,polyatomic entity,,Any molecular entity consisting of more than one atom.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:36357,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,polyatomic entity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any molecular entity consisting of more than one atom.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102197,liter per hour,,A volumetric flow rate unit which is the measure of the volume of one liter of matter crosses a given surface during the period of time equal to one hour.,FALSE,,,,,,,L/h,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102197,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2026-04-13T19:52:38.515Z,,,,,,,,,,,,,,,,,,,liter per hour,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A volumetric flow rate unit which is the measure of the volume of one liter of matter crosses a given surface during the period of time equal to one hour.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0101109,influenza subtyping scheme name,,,FALSE,,,,,,,PCDS:influenza_subtyping_scheme_name,,,,,,,,,,,,,,,,,,,,,,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0101109,,,,,,,,,,,,,,2026-04-13T17:18:02.461Z,,,,,,,,,,,,,,,,,,,influenza subtyping scheme name,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_03501196,group home facility,residential care facility,"A long-term care facility which is used to provide care for people with complex health needs, and which typically has at least one caregiver in attendance twenty four hours a day.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,residential care facility,,,,ENVO:03501196,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,group home facility,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A long-term care facility which is used to provide care for people with complex health needs, and which typically has at least one caregiver in attendance twenty four hours a day.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_0080373,epididymis disease,,A male reproductive system disease that is located_in the epididymis.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0080373,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,epididymis disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A male reproductive system disease that is located_in the epididymis.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002138,mean contig length,,The mean contig length is the count of base pairs in the average size contig of the sequence assembly.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002138,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,mean contig length,,,,,,,,,,,,,,,,,,,,,,,,,,,,Emma Griffiths,,,,The mean contig length is the count of base pairs in the average size contig of the sequence assembly.,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_397454,Escherichia coli O142:H6,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,Escherichia coli O142:H6,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:397454,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Escherichia coli O142:H6,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UO_0010053,micrograms per wheaton bottle,micrograms per bottle,A unit of mass concentration defined as the number of micrograms of a substance per 250 ml Wheaton bottle.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,micrograms per bottle,,,,UO:0010053,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,micrograms per wheaton bottle,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A unit of mass concentration defined as the number of micrograms of a substance per 250 ml Wheaton bottle.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0010050,nanogram per microliter,ng/ul|nanogram per microlitre,A mass unit density which is equal to mass of an object in nanograms divided by the volume in microliters.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ng/ul|nanogram per microlitre,,,,UO:0010050,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,nanogram per microliter,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A mass unit density which is equal to mass of an object in nanograms divided by the volume in microliters.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_60979,alpha-glucoside,,A glucoside in which the anomeric carbon of the glycosidic bond is in an α configuration,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:60979,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,alpha-glucoside,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A glucoside in which the anomeric carbon of the glycosidic bond is in an α configuration,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001491,isolate history item,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001491,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,isolate history item,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001843,health status history datum,,A health status history datum is a record of the longer-term pattern or presence of a given patient's health status.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001843,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,health status history datum,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A health status history datum is a record of the longer-term pattern or presence of a given patient's health status.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100192,childcare exposure process,,A process occuring within or in the vicinity of a human childcare environment that exposes the recipient organism to a material entity.,FALSE,,,,,,,Childcare,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100192,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,childcare exposure process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A process occuring within or in the vicinity of a human childcare environment that exposes the recipient organism to a material entity.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490399,polyethylene (low density) - polyamide container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0399,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490399,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,polyethylene (low density) - polyamide container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0050338,primary bacterial infectious disease,,"A bacterial infectious disease that results_in infection by bacteria as a result of their presence or activity within the normal, healthy host, and their intrinsic virulence is, in part, a necessary consequence of their need to reproduce and spread.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0050338,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,primary bacterial infectious disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A bacterial infectious disease that results_in infection by bacteria as a result of their presence or activity within the normal, healthy host, and their intrinsic virulence is, in part, a necessary consequence of their need to reproduce and spread.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_0050339,commensal bacterial infectious disease,,"A bacterial infectious disease that results_in infection by bacteria which are part of the normal human flora when one or more of the defense mechanisms designed to restrict them from the usually sterile internal tissues are breached by accident, by intent (surgery), or by an underlying metabolic or an infectious disorder.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0050339,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,commensal bacterial infectious disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A bacterial infectious disease that results_in infection by bacteria which are part of the normal human flora when one or more of the defense mechanisms designed to restrict them from the usually sterile internal tissues are breached by accident, by intent (surgery), or by an underlying metabolic or an infectious disorder.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_26151,piperidines,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:26151,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,piperidines,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/SO_0001462,contig_collection,contig collection,A collection of contigs.,FALSE,,,,,,,,,,,,,,See tracker ID: 2138359.,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/SO_0000149,,,,,,,,,,,,,,,,,contig collection,,,,SO:0001462,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/so.owl,,,,,,,,,contig_collection,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A collection of contigs.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0001298,Encephalopathy,,"Encephalopathy is a term that means brain disease, damage, or malfunction. In general, encephalopathy is manifested by an altered mental state.",FALSE,,,,,,,,,,,,,,"This term and its children are general and bundled terms that are kept for convenience. For new annotations, it is recommended that the specific phenotypic abnormalities be noted.",,,,,,,,,,,,,,,,,,UMLS:C0085584|SNOMEDCT_US:81308009,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0001298,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Encephalopathy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Encephalopathy is a term that means brain disease, damage, or malfunction. In general, encephalopathy is manifested by an altered mental state.",,,,,,,,
http://purl.obolibrary.org/obo/HP_0001297,Stroke,Stroke|Cerebrovascular accident|Cerebral vascular events,Sudden impairment of blood flow to a part of the brain due to occlusion or rupture of an artery to the brain.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0038454|SNOMEDCT_US:230690007,,,,,,,,,,,,,,,,,,,,,,,HP:0002452,,Stroke|Cerebrovascular accident|Cerebral vascular events,,,,HP:0001297,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Stroke,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Sudden impairment of blood flow to a part of the brain due to occlusion or rupture of an artery to the brain.,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000425,Mande Western,,A Western African population with a population size of >30 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000425,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Mande Western,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Western African population with a population size of >30 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000421,Ewe,,A Western African population with a population size of 6 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000421,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Ewe,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Western African population with a population size of 6 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000426,Mole-Dagbani,,A Gurma population with a population size of 8.6 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000426,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Mole-Dagbani,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Gurma population with a population size of 8.6 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000423,Ibibio,,A Western African population with a population size of 9.6 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000423,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Ibibio,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Western African population with a population size of 9.6 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000427,Urhobo,,The Urhobo are a Western African population with a population size of 2 million.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000427,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Urhobo,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The Urhobo are a Western African population with a population size of 2 million.,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000422,Fon,,The Fon are a Western African population with a population size of 4 million.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000422,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Fon,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The Fon are a Western African population with a population size of 4 million.,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000429,Bissa,,A Mande Western population with a population size of 1.7 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000429,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Bissa,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Mande Western population with a population size of 1.7 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000424,Ijaw,,A Western African population with a population size of >14 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000424,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Ijaw,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Western African population with a population size of >14 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000420,Esan,,A Western African population with a population size of 1.5 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000420,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Esan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Western African population with a population size of 1.5 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000428,Wolof,,The Wolof are a Western African population with a population size of 4 million.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000428,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Wolof,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The Wolof are a Western African population with a population size of 4 million.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C46110,Female Gender,Female Gender|Female,"The cultural, social, psychological, and behavior norms that are associated with being a woman.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Female Gender|Female,,,,NCIT:C46110,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Female Gender,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The cultural, social, psychological, and behavior norms that are associated with being a woman.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_33696,nucleic acid,,"A macromolecule made up of nucleotide units and hydrolysable into certain pyrimidine or purine bases (usually adenine, cytosine, guanine, thymine, uracil), <small>D</small>-ribose or 2-deoxy-<small>D</small>-ribose and phosphoric acid.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:33696,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,nucleic acid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A macromolecule made up of nucleotide units and hydrolysable into certain pyrimidine or purine bases (usually adenine, cytosine, guanine, thymine, uracil), <small>D</small>-ribose or 2-deoxy-<small>D</small>-ribose and phosphoric acid.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000125,beef strip roast (boneless),,A roast cut that comes from boneless beef strip loin.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000125,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef strip roast (boneless),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A roast cut that comes from boneless beef strip loin.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100835,taxonomic reference database version,taxonomic reference database version,A data field which describes the version of the taxonomic reference database used to identify the organism.,FALSE,,,,,,,PCDS:taxonomic_reference_database_version,,,,,,,PCDS: Provide the version number of the taxonomic reference database.,,,,,,,,,,,,,,PCDS: 1.3,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,taxonomic reference database version,taxonomic reference database version slot,,,,GENEPIO:0100835,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,taxonomic reference database version,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the version of the taxonomic reference database used to identify the organism.,,PCDS: The version of the taxonomic reference database used to identify the organism.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002085,draft sequence repository data - sequencing,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002085,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,draft sequence repository data - sequencing,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"order:

GENEPIO:0000069 # sequencing date
OBI:0000079 # culture medium” (via MicrO, yields a list of formulas).
GENEPIO:0002093  # sequencing dna extraction method
EFO:0000683  # replicate
GENEPIO:0000085  # library preparation kit
GENEPIO:0000149  # library preparation kit version
GENEPIO:0000075  # sequencing chemistry
GENEPIO:0001921  # sequencing instrument model
GENEPIO:0000150  # read trimming and filtering software
GENEPIO:0000084  # read adapter trimming software
GENEPIO:0002095  # read paired-end merging software
GENEPIO:0000090  # assembly method
GENEPIO:0000151  # bioinformatics pipeline name
GENEPIO:0000153  # bioinformatics pipeline protocol
GENEPIO:0000152  # bioinformatics pipeline version
GENEPIO:0000095 # genome annotation algorithm",,,,,
http://purl.obolibrary.org/obo/GO_0035314,scab formation,,"Formation of hardened covering (a scab) at a wound site. The scab has multiple functions including limiting blood loss, providing structural stability to the wound and guarding against infection.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GO:0035314,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/go.owl,,,,,,,,,scab formation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Formation of hardened covering (a scab) at a wound site. The scab has multiple functions including limiting blood loss, providing structural stability to the wound and guarding against infection.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_0050161,lower respiratory tract disease,,A respiratory system disease which involves the lower respiratory tract.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0050161,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,lower respiratory tract disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A respiratory system disease which involves the lower respiratory tract.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0050160,inhalation anthrax,,"An anthrax disease that results in infection located in lung lymph nodes brought on by breathing in the spores of the bacteria Bacillus anthracis. The first symptoms of inhalation anthrax are like cold or flu symptoms and can include a sore throat, mild fever and muscle aches. Later symptoms include cough, chest discomfort, shortness of breath, tiredness and muscle aches.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0050160,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,inhalation anthrax,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An anthrax disease that results in infection located in lung lymph nodes brought on by breathing in the spores of the bacteria Bacillus anthracis. The first symptoms of inhalation anthrax are like cold or flu symptoms and can include a sore throat, mild fever and muscle aches. Later symptoms include cough, chest discomfort, shortness of breath, tiredness and muscle aches.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_0050166,tuberculous salpingitis,,An urogenital tuberculosis that results_in formation of granulomas located_in fallopian tube.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0050166,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,tuberculous salpingitis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An urogenital tuberculosis that results_in formation of granulomas located_in fallopian tube.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_72695,organic molecule,,Any molecule that consists of at least one carbon atom as part of the electrically neutral entity.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:72695,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,organic molecule,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any molecule that consists of at least one carbon atom as part of the electrically neutral entity.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00002574,butchery cut of beef,,"A cut of beef that is a primal, sub-primal or retail cut.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00002574,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,butchery cut of beef,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A cut of beef that is a primal, sub-primal or retail cut.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0006612,shell,,A rigid covering that envelops an object.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0006612,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,shell,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A rigid covering that envelops an object.,,,,,,,,
http://purl.bioontology.org/ontology/MESH/D000830,animal - laboratory,,no definition at source,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,D000830,,,,,,,,,,,,,,,,,,,,,,,,http://purl.bioontology.org/ontology/MESH,,,,,,,,,animal - laboratory,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,no definition at source,,,,,,,,
http://purl.bioontology.org/ontology/MESH/D000835,animal - wild,,"Animals considered to be wild or feral or not adapted for domestic use. It does not include wild animals in zoos for which ANIMALS, ZOO is available.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,D000835,,,,,,,,,,,,,,,,,,,,,,,,http://purl.bioontology.org/ontology/MESH,,,,,,,,,animal - wild,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Animals considered to be wild or feral or not adapted for domestic use. It does not include wild animals in zoos for which ANIMALS, ZOO is available.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000201,beef shank center cut,,A center-cut cross-section of a beef leg,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000201,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef shank center cut,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A center-cut cross-section of a beef leg,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03450045,searing,,"Searing is a technique used in grilling, roasting, braising, sautéing, etc. that cooks the surface of the food at high temperature so that a brownish crust forms by Maillard reaction and denaturation of proteins.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=G0045,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03450045,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,searing,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Searing is a technique used in grilling, roasting, braising, sautéing, etc. that cooks the surface of the food at high temperature so that a brownish crust forms by Maillard reaction and denaturation of proteins.",,,,,,,,
http://purl.obolibrary.org/obo/ARO_3004401,Phoenix,,Specific automated system of analysis for determining antimicrobial susceptibility developed by Becton Dickinson.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ARO:3004401,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/aro.owl,,,,,,,,,Phoenix,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Specific automated system of analysis for determining antimicrobial susceptibility developed by Becton Dickinson.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0001169,age since birth measurement datum,,"An age measurement datum that is the result of the measurement of the age of an organism since birth, the process of emergence and separation of offspring from the mother.",FALSE,,,,,,,,,,,,,http://purl.obolibrary.org/obo/COB_0000022,,,,,,,,MO_710 birth,,,,,age since birth measurement datum,,,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0001169,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,age since birth measurement datum,,,,,,,,,,,,,,,,,,,,,,,,,,,,"PERSON:Chris Stoeckert, Jie Zheng",,,,"An age measurement datum that is the result of the measurement of the age of an organism since birth, the process of emergence and separation of offspring from the mother.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038124,medial diaphragmatic lymph node,middle diaphragmatic lymph node|medial diaphragmatic node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:12807,,,,,,,,,,,,,,,,,,,,,,,,,middle diaphragmatic lymph node|medial diaphragmatic node,,,,UBERON:0038124,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,medial diaphragmatic lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_9974,Manis javanica,,,FALSE,,,,,,,Sunda pangolin|Malayan pangolin|Javan pangolin,,,,,,,,,,,,,,,,,,,Manis javanica,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:9974,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Manis javanica,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_9973,Manis,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,Manis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:9973,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Manis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_38311,cephem,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:38311,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,cephem,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100475,publication id,publication_ID|publication identifier|publication ID,A data field which describes the identifier for a publication.,FALSE,,,,,,,PCDS:publication_id,,,,,,,"PCDS: If the isolate is associated with a published work which can provide additional information, provide the PubMed identifier of the publication. Other types of identifiers (e.g. DOI) are also acceptable.",,,,,,,,,,,,,,PCDS: PMID: 33205991,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,publication_ID|publication identifier|publication ID,publication identifier slot|publication identifier field|publication ID slot,,,,GENEPIO:0100475,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-12-22T00:55:53.808Z,,,,,,,,,,,,,,,,,,,publication id,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the identifier for a publication.,,PCDS: The identifier for a publication.,,,,,,
http://purl.obolibrary.org/obo/STATO_0000621,diagnostic yield,,diagnostic yield is a proportion in which the numerator represents the correctly detected items within the denominator that represents all items tested.,FALSE,,,,,,,,,,,,,,,,,,,,,"""Diagnostic yield was defined as the number of participants with positive findings for advanced neoplasia relative to all participants"" in https://pubs.rsna.org/doi/10.1148/radiol.12112486
Other 'definitions' found include synonymous use with sensitivity, and 'diagnostic yield' describing the statistic array of TP, FP, TN, and FN data.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000621,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,diagnostic yield,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Brian S. Alper, Harold Lehmann, Joanne Dehnbostel, Kenneth Wilkins",,,,diagnostic yield is a proportion in which the numerator represents the correctly detected items within the denominator that represents all items tested.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C19988,Organismal Process,Physiological Process|Organismal Process|Organism-Level Process,"A biologic function, activity, or process involving either specialized organ functions, individual organs, organ systems, body parts, or whole organisms.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Physiological Process|Organismal Process|Organism-Level Process,,,,NCIT:C19988,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Organismal Process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A biologic function, activity, or process involving either specialized organ functions, individual organs, organ systems, body parts, or whole organisms.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C74957,Mixed Category Laboratory Procedure,Mixed Category Laboratory Procedure,"A laboratory procedure that is performed in more than one of these laboratory specializations: anatomic pathology, clinical pathology, or molecular pathology.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Mixed Category Laboratory Procedure,,,,NCIT:C74957,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Mixed Category Laboratory Procedure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A laboratory procedure that is performed in more than one of these laboratory specializations: anatomic pathology, clinical pathology, or molecular pathology.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490373,polymethylmethacrylate container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0373,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490373,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,polymethylmethacrylate container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000352,veal loin,,A veal primal cut that comes from the area below the backbone .,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000352,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,veal loin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A veal primal cut that comes from the area below the backbone .,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020541,piece of turkey breast (with skin),,A piece of turkey breast that contains skin.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020541,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of turkey breast (with skin),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A piece of turkey breast that contains skin.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100004,surveillance sampling,,A sampling strategy in which individuals are sampled for surveillance investigations.,FALSE,,,,,,,Surveillance,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100004,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,surveillance sampling,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A sampling strategy in which individuals are sampled for surveillance investigations.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C21481,First Degree Relative,"first-degree relative|RELATIVE, FIRST DEGREE|First Degree Relative, NOS|First Degree Relative|FDR","Any relative who is one meiosis away from a particular individual in a family; a relative with whom one half of an individual's genes is shared (i.e., parent, sibling, offspring) (from Genetics Home Reference glossary)",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"first-degree relative|RELATIVE, FIRST DEGREE|First Degree Relative, NOS|First Degree Relative|FDR",,,,NCIT:C21481,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,First Degree Relative,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Any relative who is one meiosis away from a particular individual in a family; a relative with whom one half of an individual's genes is shared (i.e., parent, sibling, offspring) (from Genetics Home Reference glossary)",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001650,draft NCBI BioSample identifier model,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001650,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,draft NCBI BioSample identifier model,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001975,Bisulfite-Seq strategy,,MethylC-seq. Sequencing following treatment of DNA with bisulfite to convert cytosine residues to uracil depending on methylation status.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI SRA: Bisulfite-Seq,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001975,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Bisulfite-Seq strategy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MethylC-seq. Sequencing following treatment of DNA with bisulfite to convert cytosine residues to uracil depending on methylation status.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100248,casual indirect contact,,"A type of indirect contact where an individual may at the same location at the same time as a positive case; however, they may have been there only briefly, or it may have been a location that carries a lower risk of transmission.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100248,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,casual indirect contact,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A type of indirect contact where an individual may at the same location at the same time as a positive case; however, they may have been there only briefly, or it may have been a location that carries a lower risk of transmission.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100040,RNA re-extraction (post RT-PCR),RNA re-extraction (post reverse transcription-polymerase chain reaction),A secondary RNA extraction after performing reverse transcription polymerase chain reaction (RT-PCR). The desired output is RNA.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,RNA re-extraction (post reverse transcription-polymerase chain reaction),,,,GENEPIO:0100040,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,RNA re-extraction (post RT-PCR),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A secondary RNA extraction after performing reverse transcription polymerase chain reaction (RT-PCR). The desired output is RNA.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100724,phenotypic microbiological characterization data tag,phenotypic microbiological characterization data type|phenotypic microbiological characterization attribute bundle,A microbiological characterization data tag which indicates the presence of phenotypic microbiological characterization data.,FALSE,,,,,,,phenotypic microbiological characterization,,,,,,,"Example Guidance: Use this tag to indicate additional data is available that provides characterization information from determining, analyzing, or predicting all or part of a microorganism's phenotype.",,,,,,,,,,,"https://www.merriam-webster.com/dictionary/phenotyping used as a partial source for the ""Example Guidance"".",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,phenotypic microbiological characterization data type|phenotypic microbiological characterization attribute bundle,,,,GENEPIO:0100724,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-05-18T19:08:34.869Z,,,,,,,,,,,,,,,,,,,phenotypic microbiological characterization data tag,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A microbiological characterization data tag which indicates the presence of phenotypic microbiological characterization data.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000311,pork loin country-style ribs,,A meat cut that is derived from the blade end of a pork loin and must include not less than three (3) or more than six (6) ribs.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000311,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pork loin country-style ribs,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A meat cut that is derived from the blade end of a pork loin and must include not less than three (3) or more than six (6) ribs.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100483,experimental intervention,experimental_intervention|experimental intervention,A data field which describes the category of the experimental intervention applied in the food production system.,FALSE,,,,,,,PCDS:experimental_intervention,,,,,,,"PCDS: In some surveys, a particular intervention in the food supply chain in studied. If there was an intervention specified in the sample plan, select the intervention category from the pick list provided.",,,,,,,,,,,,,,PCDS: Vaccination [NCIT:C15346],,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,experimental_intervention|experimental intervention,experimental intervention slot,,,,GENEPIO:0100483,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-12-22T00:55:53.808Z,,,,,,,,,,,,,,,,,,,experimental intervention,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the category of the experimental intervention applied in the food production system.,,PCDS: The category of the experimental intervention applied in the food production system.,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490164,"aluminum tray or pan, paper wrapping",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0164,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490164,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"aluminum tray or pan, paper wrapping",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000000,geographic feature,macroscopic spatial feature,An astrononmical body part which delimited by physical discontinuities with its surroundings.,FALSE,,,,,,,,,,,,,,"This class is being depopulated and will be filled only with inferred subclasses. Please do not use this for direct annotation, favouring instead a more descriptive subclass.",,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Geographic_feature,,,,,,,,,,,,,,,,,,,,,,,,,macroscopic spatial feature,,,,ENVO:00000000,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,envoPolar,,,,,,,,geographic feature,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An astrononmical body part which delimited by physical discontinuities with its surroundings.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03480030,packed in slightly sweetened water or juice,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=K0030,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03480030,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,packed in slightly sweetened water or juice,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0021350,neoplasm of thorax,tumour of thorax|tumour of thoracic segment of trunk|tumour of the thorax|tumor of thorax|tumor of thoracic segment of trunk|tumor of the thorax|thoracic tumour|thoracic tumor|thoracic segment of trunk tumour|thoracic segment of trunk tumor|thoracic segment of trunk neoplasm (disease)|thoracic segment of trunk neoplasm|thoracic neoplasm|neoplasm of thoracic segment of trunk|neoplasm of the thorax,A neoplasm (disease) that involves the thoracic segment of trunk.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0039981|SCTID:255058005|NCIT:C3406|MEDGEN:11793|ICD9:239.89|ICD10CM:C30-C39,,,,,,,,,,,,,,,,,,,,,,,,,tumour of thorax|tumour of thoracic segment of trunk|tumour of the thorax|tumor of thorax|tumor of thoracic segment of trunk|tumor of the thorax|thoracic tumour|thoracic tumor|thoracic segment of trunk tumour|thoracic segment of trunk tumor|thoracic segment of trunk neoplasm (disease)|thoracic segment of trunk neoplasm|thoracic neoplasm|neoplasm of thoracic segment of trunk|neoplasm of the thorax,,,,MONDO:0021350,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,neoplasm of thorax,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A neoplasm (disease) that involves the thoracic segment of trunk.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_82699,oritavancin,,A semisynthetic glycopeptide used (as its bisphosphate salt) for the treatment of acute bacterial skin and skin structure infections caused or suspected to be caused by susceptible isolates of designated Gram-positive microorganisms including MRSA.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:29553,,,,,,CHEBI:82699,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,oritavancin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A semisynthetic glycopeptide used (as its bisphosphate salt) for the treatment of acute bacterial skin and skin structure infections caused or suspected to be caused by susceptible isolates of designated Gram-positive microorganisms including MRSA.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0009060,air sac,sacci pneumatici,"Any of the membranous air-filled extensions of the lungs of birds, which increase the efficiency of gaseous exchange in the lungs.",FALSE,,,,,,,,,,,,,,"Three distinct sets of organs perform respiration-the anterior air sacs (interclavicular, cervicals, and anterior thoracics), the lungs, and the posterior air sacs (posterior thoracics and abdominals). The posterior and anterior air sacs, typically nine, expand during inhalation. Air enters the bird via the trachea. Half of the inhaled air enters the posterior air sacs, the other half passes through the lungs and into the anterior air sacs. Air from the anterior air sacs empties directly into the trachea and out the bird's mouth or nares. The posterior air sacs empty their air into the lungs. Air passing through the lungs as the bird exhales is expelled via the trachea. Some taxonomic groups (Passeriformes) possess 7 air sacs, as the clavicular air sacs may interconnect or be fused with the cranial thoracic air sacs[WP]",,,,,,,,,,,,,,,,,,Wikipedia:Bird_anatomy#Respiratory_system|SCTID:49081009|NCIT:C120926|MESH:D000400,,,,,,,,,,,,,,,,,,,,,,,,,sacci pneumatici,,,,UBERON:0009060,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,air sac,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Any of the membranous air-filled extensions of the lungs of birds, which increase the efficiency of gaseous exchange in the lungs.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100817,fecal contamination method,fecal contamination method|faecal contamination method,An environmental data field which describes the method used to measure fecal contamination.,FALSE,,,,,,,PCDS:fecal_contamination_method,,,,,,,PCDS: Provide the name of the procedure or technology used to measure fecal contamination.,,,,,,,,,,,,,,PCDS: quantitative PCR assay,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,fecal contamination method|faecal contamination method,fecal contamination method slot|faecal contamination method slot,,,,GENEPIO:0100817,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,fecal contamination method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the method used to measure fecal contamination.,,PCDS: The method used to measure fecal contamination.,,,,,,
http://purl.obolibrary.org/obo/NCIT_C3353,Acute Respiratory Distress Syndrome,Adult respiratory distress syndrome|Adult Respiratory Distress Syndrome|Adult RDS|Acute Respiratory Distress Syndrome|ARDS,"Progressive and life-threatening pulmonary distress in the absence of an underlying pulmonary condition, usually following major trauma or surgery. Cases of neonatal respiratory distress syndrome are not included in this definition.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Adult respiratory distress syndrome|Adult Respiratory Distress Syndrome|Adult RDS|Acute Respiratory Distress Syndrome|ARDS,,,,NCIT:C3353,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Acute Respiratory Distress Syndrome,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Progressive and life-threatening pulmonary distress in the absence of an underlying pulmonary condition, usually following major trauma or surgery. Cases of neonatal respiratory distress syndrome are not included in this definition.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000115,NCBI standard,,The National Center for Biotechnology Information offers standards for submitting genomic project data to their BioProject and BioSample databases.,FALSE,,,,,,,National Center for Biotechnology Information standard,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000115,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI standard,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,The National Center for Biotechnology Information offers standards for submitting genomic project data to their BioProject and BioSample databases.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000177,beef flank steak,,A steak cut from the beef flank.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000177,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef flank steak,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A steak cut from the beef flank.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03400361,agency food product type,,An agency food product type is a class of food product defined by an agency or consortium.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=A0361,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03400361,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,agency food product type,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An agency food product type is a class of food product defined by an agency or consortium.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100726,biolog phenotype microarray characterization tag,biolog phenotype microarray data type,A phenotypic microbiological characterization data tag which indicates the presence of biolog phenotype microarray characterization data.,FALSE,,,,,,,biolog phenotype microarray,,,,,,,Example Guidance: Use this tag to indicate additional data is available that provides phenotypic characterization using biolog microarray technology.,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,biolog phenotype microarray data type,,,,GENEPIO:0100726,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-05-18T19:08:34.869Z,,,,,,,,,,,,,,,,,,,biolog phenotype microarray characterization tag,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A phenotypic microbiological characterization data tag which indicates the presence of biolog phenotype microarray characterization data.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038868,paramammary lymph node,paramammary node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:44313,,,,,,,,,,,,,,,,,,,,,,,,,paramammary node,,,,UBERON:0038868,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,paramammary lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038861,tibial lymph node,tIbial node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:44306,,,,,,,,,,,,,,,,,,,,,,,,,tIbial node,,,,UBERON:0038861,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,tibial lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038864,fibular lymph node,peroneal node|peroneal lymph node|nodus lymphoideus fibularis|nodus fibularis|fibular node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:44309,,,,,,,,,,,,,,,,,,,,,,,,,peroneal node|peroneal lymph node|nodus lymphoideus fibularis|nodus fibularis|fibular node,,,,UBERON:0038864,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,fibular lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038867,interpectoral lymph node,interpectoral node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:44312,,,,,,,,,,,,,,,,,,,,,,,,,interpectoral node,,,,UBERON:0038867,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,interpectoral lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038860,distal deep inguinal lymph node,nodus lymphoideus inguinales profundi distalis|nodus inguinales profundi distalis|distal inguinal lymph node|distal deep inguinal node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:44305,,,,,,,,,,,,,,,,,,,,,,,,,nodus lymphoideus inguinales profundi distalis|nodus inguinales profundi distalis|distal inguinal lymph node|distal deep inguinal node,,,,UBERON:0038860,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,distal deep inguinal lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0000590,autoimmune disorder of peripheral nervous system,peripheral nervous system hypersensitivity reaction type II disease|peripheral nervous system autoimmune disease,A hypersensitivity reaction type II disease that involves the peripheral nervous system.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0060033,,,,,,,,,,,,,,,,,,,,,,,,,peripheral nervous system hypersensitivity reaction type II disease|peripheral nervous system autoimmune disease,,,,MONDO:0000590,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,autoimmune disorder of peripheral nervous system,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A hypersensitivity reaction type II disease that involves the peripheral nervous system.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510130,"\""high\""label claim",,"An amount customarily consumed contains 20% or more of the daily nutritional value to describe protein, vitamins, minerals, dietary fiber, or potassium. May be used on meals or main dishes to indicate that product contains a food that meets the definition.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0130,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510130,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"""high""label claim",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An amount customarily consumed contains 20% or more of the daily nutritional value to describe protein, vitamins, minerals, dietary fiber, or potassium. May be used on meals or main dishes to indicate that product contains a food that meets the definition.",,,,,,,,
http://purl.obolibrary.org/obo/OBI_0002800,personal protective clothing item,,A personal protective device which consists of a garment that serves in place of or in addition to regular body clothing.,FALSE,,,,,,,,,,,,,,,,,,,,,OBI,,,,,personal protective clothing item,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0002800,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,personal protective clothing item,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://orcid.org/0000-0002-8844-9165,,,https://github.com/obi-ontology/obi/issues/1193,A personal protective device which consists of a garment that serves in place of or in addition to regular body clothing.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000136,"beef tenderloin (bone-in, raw)",,A raw beef tenderloin that contains bone material.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000136,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"beef tenderloin (bone-in, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef tenderloin that contains bone material.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_131927,dicarboxylic acids and O-substituted derivatives,,A class of carbonyl compound encompassing dicarboxylic acids and any derivatives obtained by substitution of either one or both of the carboxy hydrogens.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:131927,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,dicarboxylic acids and O-substituted derivatives,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A class of carbonyl compound encompassing dicarboxylic acids and any derivatives obtained by substitution of either one or both of the carboxy hydrogens.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002114,feces collection,stool collection,The process of collecting a portion of feces from an organism.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,stool collection,,,,GENEPIO:0002114,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,feces collection,,,,,,,,,,,,,,,,,,,,,,,,,,,,Emma Griffiths,,,,The process of collecting a portion of feces from an organism.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100811,total phosphorus tp measurement value,total phosphorus (TP) measurement value,An environmental data field which describes the numerical value of a measurement of total phosphorus (TP).,FALSE,,,,,,,PCDS:total_phosphorus_tp_measurement_value,,,,,,,PCDS: Provide the numerical value of the measured TP.,,,,,,,,,,,,,,PCDS: 2,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,total phosphorus (TP) measurement value,total phosphorus (TP) measurement value slot,,,,GENEPIO:0100811,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,total phosphorus tp measurement value,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the numerical value of a measurement of total phosphorus (TP).,,PCDS: The numerical value of a measurement of total phosphorus (TP).,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490403,polyethylene (low density) - polyethylene (low density) container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0403,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490403,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,polyethylene (low density) - polyethylene (low density) container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/OBI_1110049,allergy,,"is a disease in which an abnormally strong inflammatory immune response is triggered against non-self entities, and the immune response has no protective effect",FALSE,,,,,,,,,,,,,,,,,,,,,IEDB,,,,,allergy,,,,,http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:1110049,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,allergy,,,,,,,,,,,,,,,,,,,,,,,,,,,,IEDB,,,,"is a disease in which an abnormally strong inflammatory immune response is triggered against non-self entities, and the immune response has no protective effect",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C127784,Schoolmate,Schoolmate|SCHOOLMATE,Any individual with whom the subject attends or attended the same school.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Schoolmate|SCHOOLMATE,,,,NCIT:C127784,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Schoolmate,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any individual with whom the subject attends or attended the same school.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03480037,"packed in gravy or sauce, vegetable",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=K0037,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03480037,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"packed in gravy or sauce, vegetable",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100748,organic matter composition tag,organic matter composition data type,A matter composition characterization data tag which indicates the presence of data that describes organic matter composition.,FALSE,,,,,,,organic matter composition,,,,,,,Example Guidance: Use this tag to indicate additional data is available that provides the composition of the mass of something comprised of organic compounds.,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,organic matter composition data type,,,,GENEPIO:0100748,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-05-18T19:08:34.869Z,,,,,,,,,,,,,,,,,,,organic matter composition tag,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A matter composition characterization data tag which indicates the presence of data that describes organic matter composition.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100187,contact with person with acute respiratory illness exposure process,,A process occuring within or in the vicinity of a human with acute respiratory illness that exposes the recipient organism to said acute respiratory illness.,FALSE,,,,,,,Contact with Person with Acute Respiratory Illness,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100187,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,contact with person with acute respiratory illness exposure process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A process occuring within or in the vicinity of a human with acute respiratory illness that exposes the recipient organism to said acute respiratory illness.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001830,ISO3166-1,,"ISO 3166-1 is part of the ISO 3166 standard published by the International Organization for Standardization (ISO), and defines codes for the names of countries, dependent territories, and special areas of geographical interest.",FALSE,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/ISO_3166-2,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001830,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ISO3166-1,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"ISO 3166-1 is part of the ISO 3166 standard published by the International Organization for Standardization (ISO), and defines codes for the names of countries, dependent territories, and special areas of geographical interest.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470181,filling conditions for pasteurization,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0181,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470181,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,filling conditions for pasteurization,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0101027,air temperature units,air temperature units,An environmental data field which describes the units of measurement for air temperature.,FALSE,,,,,,,PCDS:air_temperature_units,,,,,,,PCDS: Provide the units of measurement for which the temperature was recorded.,,,,,,,,,,,,,,PCDS: degree Celsius (C) [UO:0000027],,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,air temperature units,air temperature units slot,,,,GENEPIO:0101027,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,air temperature units,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the units of measurement for air temperature.,,PCDS: The units of measurement for air temperature.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001602,sequencing project method,,,FALSE,,,,,,,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/books/NBK54364/,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001602,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,sequencing project method,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,sequencing|select sequence if any sequence data is generated from this project.,,,,
http://purl.obolibrary.org/obo/FOODON_03490364,polyester container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0364,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490364,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,polyester container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102273,prior antiviral treatment during prior infection,,A data field which describes the antiviral treatment for any infection during the prior pathogen infection period.,FALSE,,,,,,,PCDS:prior_antiviral_treatment_during_prior_infection,,,,,,,PCDS: Provide a description of any antiviral treatment administered for viral infections (not including pathogen treatment) during the prior pathogen infection period. This field is meant to capture concurrent treatment information.,,,,,,,,,,,,,,PCDS: AZT was administered for HIV infection during the prior Mpox infection.,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102273,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2026-04-09T18:02:29.914Z,,,,,,,,,,,,,,,,,,,prior antiviral treatment during prior infection,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the antiviral treatment for any infection during the prior pathogen infection period.,,PCDS: Antiviral treatment for any infection during the prior pathogen infection period.,,,,,,
http://purl.obolibrary.org/obo/CHEBI_25865,penicillanic acids,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:25865,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,penicillanic acids,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HP_0001787,Abnormal delivery,Delivery complication|Abnormal delivery,An abnormality of the birth process.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0549629|SNOMEDCT_US:274127000,,,,,,,,,,,,,,,,,,,,,,,,,Delivery complication|Abnormal delivery,,,,HP:0001787,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal delivery,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An abnormality of the birth process.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001483,consensus genome length,consensus genome length,A data field which describes the file size of the assembled genome described as the number of base pairs.,FALSE,,,,,,,PCDS:consensus_genome_length,,,,,,,PCDS: Provide a numerical value (no need to include units).,,,,,,,,,,,,,,PCDS: 38677,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,consensus genome length,consensus genome length slot,,,,GENEPIO:0001483,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,consensus genome length,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the file size of the assembled genome described as the number of base pairs.,,PCDS: Size of the assembled genome described as the number of base pairs.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100775,water catchment area human population measurement method,water catchment human population measurement method,An environmental data field which describes the method by which a water catchment 's human population size was measured or estimated,FALSE,,,,,,,PCDS:water_catchment_area_human_population_measurement_method,,,,,,,PCDS: Provide a brief description of how catchment population size was measured or estimated.,,,,,,,,,,,,,,PCDS: population of jurisdiction encompassing the wastewater service area,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,water catchment human population measurement method,water catchment human population measurement method slot,,,,GENEPIO:0100775,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,water catchment area human population measurement method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the method by which a water catchment 's human population size was measured or estimated,,PCDS: The method by which a water catchment 's human population size was measured or estimated,,,,,,
http://purl.obolibrary.org/obo/HP_0001751,Abnormal vestibular function,Vestibular function defect|Interictal vestibular dysfunction|Impaired vestibular function,An abnormality of the functioning of the vestibular apparatus.,FALSE,,,,,,,,,,,,,,"The vestibular apparatus is the nonauditory portion of the inner ear that mediates the subjective sensation of motion and spatial orientation of the head, adjusts muscular activity and body position to maintain posture, and stabilizes in space the fixation point of the eyes when the head moves, in order to provide a stable image upon the retina. The functioning of the vestibular system is often checked clinically by means of the caloric test, in which the head is tilted backward by about 60 degrees and either warm or cold water is introduced into the external auditory meatus on one side. The immediate results are usually vertigo, nausea, nystagmus, and twisting of the head and body.",,,,,,,,,,,,,,,,,,UMLS:C1843865,,,,,,,,,,,,,,,,,,,,,,,HP:0007921|HP:0006917,,Vestibular function defect|Interictal vestibular dysfunction|Impaired vestibular function,,,,HP:0001751,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal vestibular function,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An abnormality of the functioning of the vestibular apparatus.,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_816,Bacteroides,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,Bacteroides,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:816,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Bacteroides,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ARO_3004372,MIC unit,,Unit for measurement of minimum inhibitory concentration (MIC).,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ARO:3004372,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/aro.owl,,,,,,,,,MIC unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Unit for measurement of minimum inhibitory concentration (MIC).,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000088,sequencer flow cell cluster density,,"Cluster Generation is a process by which libraries amplified into clonal clusters on a flow cell. The density of those clusters in the lane, is the cluster density.",FALSE,,,,,,,,,,,,,,,,,,,,,URI: https://www.broadinstitute.org/files/shared/illuminavids/clusterGenSlides.pdf,,,,,,,800 k/mm^2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000088,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,sequencer flow cell cluster density,,,,,Run QC,,,,,,,,,,,,,,,,,,,,,,Cluster density,,,Output from MiSeq,,"Cluster Generation is a process by which libraries amplified into clonal clusters on a flow cell. The density of those clusters in the lane, is the cluster density.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000014,beef top round steak,,A steak cut from the beef top round.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000014,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef top round steak,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A steak cut from the beef top round.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000986,agricultural fairground,,"A fairground which is used to exhibit agricultural technology, livestock, and farm-related activity.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01000986,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,agricultural fairground,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A fairground which is used to exhibit agricultural technology, livestock, and farm-related activity.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100147,MGI DNBSEQ-T7,,A high throughput DNA sequencer manufactured by the MGI corporation with an output capacity of 1~6TB of data per day.,FALSE,,,,,,,DNBSEQ-T7,,,,,,,,,,,,,,https://mgi-tech.eu/sequencing-products/dnbseq-t7,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100147,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,MGI DNBSEQ-T7,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A high throughput DNA sequencer manufactured by the MGI corporation with an output capacity of 1~6TB of data per day.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0000869,polyA RNA extract,,A RNA extract that is the output of an extraction process in which RNA molecules with poly A tail at its 3' end are purified.,FALSE,,,,,,,,,,,,,,,,,,,,,UPenn Group,,,,,polyA RNA extract,,"Preparation of polyA RNA by cellulose-bound oligo-dT (Aviv, H., Leder, P. 1972. Purification of biologically active globin messenger RNA by chromatography on oligothymidylic acid-cellulose. Proc. Nat. Acad. Sci. USA 69, 1408-1412.)",,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0000869,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,polyA RNA extract,,,,,,,,,,,,,,,,,,,,,,,,,,,,PERSON: Jie Zheng|PERSON: Chris Stoeckert,,,,A RNA extract that is the output of an extraction process in which RNA molecules with poly A tail at its 3' end are purified.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_11750,Bordetella parapertussis whooping cough,,"A pertussis that is a milder disease caused by the bacterium Bordetella parapertussis. The disease has_symptom coughing, has_symptom sneezing, or has_symptom runny nose.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:11750,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,Bordetella parapertussis whooping cough,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A pertussis that is a milder disease caused by the bacterium Bordetella parapertussis. The disease has_symptom coughing, has_symptom sneezing, or has_symptom runny nose.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00001180,prepared food product,,"Food product that is 1) ready or nearly ready for consumption; 2) usually a composite of several foods or ingredients that often belong to distinct product types; 3) usually formulated, mixed and partially or fully cooked.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00001180,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,prepared food product,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Food product that is 1) ready or nearly ready for consumption; 2) usually a composite of several foods or ingredients that often belong to distinct product types; 3) usually formulated, mixed and partially or fully cooked.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001742,subnational region,,"A subnational region is a type of subnational entity similar to a nation's state, province, or territory.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001742,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,subnational region,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"A subnational region is a type of subnational entity similar to a nation's state, province, or territory.",,,lookup:http://purl.obolibrary.org/obo/GAZ_00000448,region,,,,
http://purl.obolibrary.org/obo/FOODON_03510176,alcohol free claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0176,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510176,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,alcohol free claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C64810,Nitrite Measurement,Nitrite Measurement|Nitrite|NITRITE,A quantitative measurement of the amount of nitrite present in a sample.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Nitrite Measurement|Nitrite|NITRITE,,,,NCIT:C64810,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Nitrite Measurement,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A quantitative measurement of the amount of nitrite present in a sample.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102069,AMR analysis date,,"PCDS: Providing the date that an analyis was performed can help provide context for tool and reference database versions. Provide the date that the analysis was performed in ISO 8601 format, i.e. 'YYYY-MM-DD'.",FALSE,,,,,,,PCDS:amr_analysis_date,,,,,,,"PCDS: Providing the date that an analyis was performed can help provide context for tool and reference database versions. Provide the date that the analysis was performed in ISO 8601 format, i.e. 'YYYY-MM-DD'.",,,,,,,,,,,,,,PCDS: 2020-05-25,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102069,,,,,,,,,,,,,,2026-04-13T17:16:47.336Z,,,,,,,,,,,,,,,,,,,AMR analysis date,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PCDS: The date the antimicrobial resistance analysis was performed.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001797,specimen collector,,A datum containing the name of persons or institute who collected a given specimen.,FALSE,,,,,,,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/biosample/docs/attributes/,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001797,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,specimen collector,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A datum containing the name of persons or institute who collected a given specimen.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020213,"piece of chicken meat (with bone, raw)",,A raw piece of chicken meat that contains bone material.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020213,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"piece of chicken meat (with bone, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw piece of chicken meat that contains bone material.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C45910,Sex Pooled Sample,pooled|Sex Pooled Specimen|Sex Pooled Sample|Pooled Sample,A mix of specimens from multiple individuals representing multiple sex groups.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Damion Dooley's note: here ""sample"" means more than one specimen merged together.",,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,pooled|Sex Pooled Specimen|Sex Pooled Sample|Pooled Sample,,,,NCIT:C45910,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Sex Pooled Sample,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A mix of specimens from multiple individuals representing multiple sex groups.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02021250,"lamb chop (boneless, raw)",,A raw and boneless lamb chop.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02021250,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"lamb chop (boneless, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw and boneless lamb chop.,,,,,,,,
http://www.ebi.ac.uk/efo/EFO_0021779,age at initiation of treatment,age at initiation of medical treatment|age at first treatment,"Age at initiation of a medical treatment, such as a drug, therapy or medical device.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCIT:C124440,,,,,,,,,,,,,,,,,,,,,,,,,age at initiation of medical treatment|age at first treatment,,,,efo:EFO_0021779,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age at initiation of treatment,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Age at initiation of a medical treatment, such as a drug, therapy or medical device.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03450030,cooking with inherent fat or oil,,Cooked in fat or oil rendered from the food being prepared.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=G0030,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03450030,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,cooking with inherent fat or oil,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Cooked in fat or oil rendered from the food being prepared.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100142,Oxford Nanopore MinION,,"A portable DNA sequencer which is manufactured by the Oxford Nanopore Technologies corporation, that uses consumable flow cells producing up to 30 Gb of DNA sequence data per flow cell. The sequencer produces real-time results and utilizes nanopore technology with up to 512 nanopore channels in the sensor array.",FALSE,,,,,,,,,,,,,,,,,,,,,https://nanoporetech.com/products/sequence/minion,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100142,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,Oxford Nanopore MinION,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A portable DNA sequencer which is manufactured by the Oxford Nanopore Technologies corporation, that uses consumable flow cells producing up to 30 Gb of DNA sequence data per flow cell. The sequencer produces real-time results and utilizes nanopore technology with up to 512 nanopore channels in the sensor array.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100713,salinity measurement characterization tag,salinity measurement characterization data tag,A chemical characterization data tag which indicates the presence of data that describes a measurement of salinity.,FALSE,,,,,,,salinity measurement,,,,,,,Example Guidance: Use this tag to indicate additional data is available that provides characterization information from the quantitative measurement of the amount of salt dissolved in a body of water.,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,salinity measurement characterization data tag,,,,GENEPIO:0100713,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-05-18T19:08:34.869Z,,,,,,,,,,,,,,,,,,,salinity measurement characterization tag,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A chemical characterization data tag which indicates the presence of data that describes a measurement of salinity.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03460119,microbial/enzymatic modification process,,A food modification process by microbial or enzymatic action which results in molecular changes in any food component.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=H0119,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03460119,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,microbial/enzymatic modification process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A food modification process by microbial or enzymatic action which results in molecular changes in any food component.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001022,obsolete: market,,"A market, or marketplace, is a location where people regularly gather for the purchase and sale of provisions, livestock, and other goods",TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001022,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: market,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,http://purl.obolibrary.org/obo/ENVO_01000987,,,"A market, or marketplace, is a location where people regularly gather for the purchase and sale of provisions, livestock, and other goods",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001875,datetime range member - UNUSED?,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,This seems to be covered by 'datetime range intermediate',,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001875,,http://purl.obolibrary.org/obo/GENEPIO_0001878,http://purl.obolibrary.org/obo/GENEPIO_0001877,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,datetime range member - UNUSED?,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490203,bottle or jar,,A container which is a bottle or a jar.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0203,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490203,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,bottle or jar,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A container which is a bottle or a jar.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_25389,monohydroxybenzoic acid,,Any hydroxybenzoic acid having a single phenolic hydroxy substituent on the benzene ring.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:25389,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,monohydroxybenzoic acid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any hydroxybenzoic acid having a single phenolic hydroxy substituent on the benzene ring.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490420,inner bag,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0420,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490420,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,inner bag,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001592,raw sequence read objective,,A raw sequence reads project objective has the goal of submission of raw reads to SRA or Trace repositories,FALSE,,,,,,,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/books/NBK54364/,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001592,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,raw sequence read objective,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A raw sequence reads project objective has the goal of submission of raw reads to SRA or Trace repositories,,,,raw sequence reads,,,,
http://purl.obolibrary.org/obo/UBERON_0010371,ecto-epithelium,ectoderm-derived epithelium,"Epithelium composed of cells that develops from the ectoderm[FMA,modified].",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:69064,,,,,,,,,,,,,,,,,,,,,,,,,ectoderm-derived epithelium,,,,UBERON:0010371,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,ecto-epithelium,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Epithelium composed of cells that develops from the ectoderm[FMA,modified].",,,,,,,,
http://purl.obolibrary.org/obo/HP_0030810,Abnormal tongue physiology,,Any functional anomaly of the tongue.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4280754,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0030810,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal tongue physiology,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any functional anomaly of the tongue.,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_1078032,Escherichia coli O45:H2,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,Escherichia coli O45:H2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:1078032,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Escherichia coli O45:H2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ARO_3004412,agar plug diffusion method,,This method is commonly used to study the antagonism between microorganisms. The first bacterial strain is inoculated onto agar plates in tight streaks. The bacteria will secrete molecules that diffuse in the agar medium; this medium is cut and placed on another agar plate inoculated with another microorganism.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ARO:3004412,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/aro.owl,,,,,,,,,agar plug diffusion method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,This method is commonly used to study the antagonism between microorganisms. The first bacterial strain is inoculated onto agar plates in tight streaks. The bacteria will secrete molecules that diffuse in the agar medium; this medium is cut and placed on another agar plate inoculated with another microorganism.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_03501220,door,,"A manufactured product which is composed of a hinged, sliding, or revolving barrier which is installed at the entrance to a building, room, vehicle, or in the framework of a cabinet.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:03501220,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,door,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A manufactured product which is composed of a hinged, sliding, or revolving barrier which is installed at the entrance to a building, room, vehicle, or in the framework of a cabinet.",,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000076,mine,,An excavation in the Earth for the purpose of extracting earth materials.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,TGN:54212|TGN:54211|Geonames:S.MN|Geonames:L.MNA|FTT:968|FTT:14|EcoLexicon:mine,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00000076,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,mine,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An excavation in the Earth for the purpose of extracting earth materials.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C173621,Vaping,Vaping|Vape,Inhaling the vapor produced by an electronic cigarette or similar device.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Vaping|Vape,,,,NCIT:C173621,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Vaping,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Inhaling the vapor produced by an electronic cigarette or similar device.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03500022,polystyrene surface,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=N0022,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03500022,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,polystyrene surface,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HP_0031292,Cutaneous abscess,Skin abscess,A circumscribed area of pus or necrotic debris in the skin (within the epidermis or dermis).,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Skin abscess,,,,HP:0031292,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Cutaneous abscess,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A circumscribed area of pus or necrotic debris in the skin (within the epidermis or dermis).,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000546,lake sediment,,"Lake sediment is sediment which covers the bottom of a lake. Lake sediments are comprised mainly of clastic material (sediment of clay, silt, and sand sizes), organic debris, chemical precipitates, or combinations of these.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00000546,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,lake sediment,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Lake sediment is sediment which covers the bottom of a lake. Lake sediments are comprised mainly of clastic material (sediment of clay, silt, and sand sizes), organic debris, chemical precipitates, or combinations of these.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001984,MBD-Seq strategy,,Direct sequencing of methylated fractions sequencing strategy.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI SRA: MBD-Seq,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001984,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MBD-Seq strategy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Direct sequencing of methylated fractions sequencing strategy.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510218,food allergen labelling about peanuts and products thereof,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0218,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510218,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food allergen labelling about peanuts and products thereof,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510184,fortified food claim,,A food is 'fortified' when nutrients that were never present are added to it.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0184,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510184,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,fortified food claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A food is 'fortified' when nutrients that were never present are added to it.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0002525,brachial lymph node,,The lymph nodes located along the brachial vein that receive drainage from most of the free upper limb and send efferent vessels to the central axillary lymph nodes.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Brachial_lymph_nodes|UMLS:C0229840|NCIT:C92221|MA:0002878|FMA:44314,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0002525,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,brachial lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The lymph nodes located along the brachial vein that receive drainage from most of the free upper limb and send efferent vessels to the central axillary lymph nodes.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0002526,lumbar lymph node,,The lumbar lymph nodes (paraaortic nodes) are a group of lymph nodes residing in the lumbar region. They consist of the following groups: right and left lateral aortic lymph nodes preaortic lymph nodes retroaortic lymph nodes (or 'postaortic').,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Lumbar_lymph_nodes|SCTID:281412000|NCIT:C118775|MA:0002879|FMA:84599,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0002526,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,lumbar lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The lumbar lymph nodes (paraaortic nodes) are a group of lymph nodes residing in the lumbar region. They consist of the following groups: right and left lateral aortic lymph nodes preaortic lymph nodes retroaortic lymph nodes (or 'postaortic').,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0002529,limb segment,subdivision of limb|segment of limb|free limb segment,"A major subdivision of a mature or developing limb, including both skeletal elements (or the mesenchyme that gives rise to the skeletal elements) and associated tissues, such as muscle, connective tissue, integument. Examples: autopod region, zeugopod region, stylopod region, metapodial region, arm region. Excludes the limb girdles.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C1268195|NCIT:C38630|MA:0002889|FMA:241863,,,,,,,,,,,,,,,,,,,,,,,,,subdivision of limb|segment of limb|free limb segment,,,,UBERON:0002529,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,limb segment,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A major subdivision of a mature or developing limb, including both skeletal elements (or the mesenchyme that gives rise to the skeletal elements) and associated tissues, such as muscle, connective tissue, integument. Examples: autopod region, zeugopod region, stylopod region, metapodial region, arm region. Excludes the limb girdles.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0002528,sacral lymph node,sacral node,A lymph node located in the sacral region.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Sacral_lymph_nodes|UMLS:C0229827|SCTID:279797001|NCIT:C77647|MA:0002883|FMA:16655,,,,,,,,,,,,,,,,,,,,,,,,,sacral node,,,,UBERON:0002528,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,sacral lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A lymph node located in the sacral region.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0002524,mediastinal lymph node,mediastinal node,"A lymph node that is part of a mediastinum. Each consists of several lymph node groups, especially along the trachea (5 groups), along the esophagus and between the lung and the diaphragm. In the mediastinal lymph nodes arises lymphatic ducts, which draines the lymph to the left subclavian vein (to the venous angle in the confluence of the subclavian and deep jugular veins). The mediastinal lymph nodes along the esophagus are in tight connection with the abdominal lymph nodes along the esophagus and the stomach. That fact facilitates spreading of tumors cells through these lymphatics in cases of cancers of the stomach and particularly of the esophagus. Through the mediastinum, the main lymphatic drainage from the abdominal organs goes via the thoracic duct (ductus thoracicus), which drains majority of the lymph from the abdomen to the above mentioned left venous angle.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Lymph_node#Lymph_nodes_of_the_thorax|UMLS:C0588055|SCTID:181760002|NCIT:C33073|MA:0002877|FMA:12774|EMAPA:35555|EFO:0001670,,,,,,,,,,,,,,,,,,,,,,,,,mediastinal node,,,,UBERON:0002524,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,mediastinal lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A lymph node that is part of a mediastinum. Each consists of several lymph node groups, especially along the trachea (5 groups), along the esophagus and between the lung and the diaphragm. In the mediastinal lymph nodes arises lymphatic ducts, which draines the lymph to the left subclavian vein (to the venous angle in the confluence of the subclavian and deep jugular veins). The mediastinal lymph nodes along the esophagus are in tight connection with the abdominal lymph nodes along the esophagus and the stomach. That fact facilitates spreading of tumors cells through these lymphatics in cases of cancers of the stomach and particularly of the esophagus. Through the mediastinum, the main lymphatic drainage from the abdominal organs goes via the thoracic duct (ductus thoracicus), which drains majority of the lymph from the abdomen to the above mentioned left venous angle.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0002527,pancreatic lymph node,pancreatic node|pancreas lymph node|lymph node of pancreas,A lymph node that is part of a pancreas [Automatically generated definition].,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0229783|SCTID:276170003|NCIT:C77642|MA:0002881|FMA:16626,,,,,,,,,,,,,,,,,,,,,,,,,pancreatic node|pancreas lymph node|lymph node of pancreas,,,,UBERON:0002527,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,pancreatic lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A lymph node that is part of a pancreas [Automatically generated definition].,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0002520,submandibular lymph node,submandibular node,"The submandibular lymph nodes (submaxillary glands in older texts), three to six in number, are placed beneath the body of the mandible in the submaxillary triangle, and rest on the superficial surface of the submaxillary salivary gland. One gland, the middle gland of Stahr, which lies on the external maxillary artery as it turns over the mandible, is the most constant of the series; small lymph glands are sometimes found on the deep surface of the submaxillary salivary glands. The afferents of the submaxillary glands drain the medial palpebral commissure, the cheek, the side of the nose, the upper lip, the lateral part of the lower lip, the gums, and the anterior part of the margin of the tongue. Efferent vessels from the facial and submental glands also enter the submaxillary glands. Their efferent vessels pass to the superior deep cervical glands. [WP,unvetted].",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Submandibular_lymph_node|UMLS:C0229722|SCTID:245319003|NCIT:C77650|MA:0002843|FMA:61224|BTO:0000769,,,,,,,,,,,,,,,,,,,,,,,,,submandibular node,,,,UBERON:0002520,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,submandibular lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The submandibular lymph nodes (submaxillary glands in older texts), three to six in number, are placed beneath the body of the mandible in the submaxillary triangle, and rest on the superficial surface of the submaxillary salivary gland. One gland, the middle gland of Stahr, which lies on the external maxillary artery as it turns over the mandible, is the most constant of the series; small lymph glands are sometimes found on the deep surface of the submaxillary salivary glands. The afferents of the submaxillary glands drain the medial palpebral commissure, the cheek, the side of the nose, the upper lip, the lateral part of the lower lip, the gums, and the anterior part of the margin of the tongue. Efferent vessels from the facial and submental glands also enter the submaxillary glands. Their efferent vessels pass to the superior deep cervical glands. [WP,unvetted].",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_30879,alcohol,,"A compound in which a hydroxy group, ‒OH, is attached to a saturated carbon atom.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:2553|CHEBI:22288|CHEBI:13804,,,,,,CHEBI:30879,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,alcohol,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A compound in which a hydroxy group, ‒OH, is attached to a saturated carbon atom.",,,,,,,,
http://www.ebi.ac.uk/efo/EFO_0900003,abdominal age,,"A prediction outputted by the ensemble model leveraging both liver and pancreas MRIs, which estimates how old the abdominal organs and tissues appear biologically, as opposed to chronological age (time since birth).",FALSE,,,,,,,,,,,,,,"After adjusting for technical bias in age prediction residuals, the difference between predicted abdominal age and actual age is interpreted as “accelerated” or “decelerated” abdominal aging.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,efo:EFO_0900003,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,abdominal age,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A prediction outputted by the ensemble model leveraging both liver and pancreas MRIs, which estimates how old the abdominal organs and tissues appear biologically, as opposed to chronological age (time since birth).",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490128,plastic wrapper,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0128,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490128,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,plastic wrapper,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0080995,tuberculous encephalopathy,,A tuberculosis that is characterized by cerebral edema sometimes with features similar to acute disseminated encephalomyelitis (ADEM) and may manifest with a variety of symptoms ranging from focal neurological deficits to convulsions and decreased conscious state.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0080995,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,tuberculous encephalopathy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A tuberculosis that is characterized by cerebral edema sometimes with features similar to acute disseminated encephalomyelitis (ADEM) and may manifest with a variety of symptoms ranging from focal neurological deficits to convulsions and decreased conscious state.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020467,piece of turkey meat (with skin),,A piece of turkey meat that contains skin.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020467,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of turkey meat (with skin),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A piece of turkey meat that contains skin.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002048,antimicrobial resistant plasmid type,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002048,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,antimicrobial resistant plasmid type,,,,,,,,,,,,,,,,,,,,,,,,,,,,"",,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100617,incubation temperature value,,PCDS: Provide the temperature at which the isolate was isolated.,FALSE,,,,,,,PCDS:incubation_temperature_value,,,,,,,PCDS: Provide the temperature at which the isolate was isolated.,,,,,,,,,,,,,,PCDS: 37,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100617,,,,,,,,,,,,,,2026-04-13T17:18:02.461Z,,,,,,,,,,,,,,,,,,,incubation temperature value,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PCDS: An environmental datum specifying the temperature at which an organism or organisms were incubated for the purposes of growth on or in a particular medium.,,,,,,
http://purl.obolibrary.org/obo/UBERON_0002075,viscus,visceral organ system|visceral organ,"An organ that is located within the body cavity (or in its extension, in the scrotum); it consists of organ parts that are embryologically derived from endoderm, splanchnic mesoderm or intermediate mesoderm; together with other organs, the viscus constitutes the respiratory, gastrointestinal, urinary, reproductive and immune systems, or is the central organ of the cardiovascular system. Examples: heart, lung, esophagus, kidney, ovary, spleen.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,XAO:0003034|Wikipedia:Viscus|UMLS:C0042779|SCTID:118760003|RETIRED_EHDAA2:0002201|NCIT:C28287|MESH:D014781|MA:0000019|FMA:7085|EMAPA:16245|EHDAA:512|BTO:0001491|AAO:0010386,,,,,,,,,,,,,,,,,,,,,,,,,visceral organ system|visceral organ,,,,UBERON:0002075,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,viscus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An organ that is located within the body cavity (or in its extension, in the scrotum); it consists of organ parts that are embryologically derived from endoderm, splanchnic mesoderm or intermediate mesoderm; together with other organs, the viscus constitutes the respiratory, gastrointestinal, urinary, reproductive and immune systems, or is the central organ of the cardiovascular system. Examples: heart, lung, esophagus, kidney, ovary, spleen.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100413,travel point of entry type field category,travel point of entry type|PCDS:antimicrobial resistance,A data field which describes the type of entry point a traveler arrives through.,FALSE,,,,,,,PCDS:travel_point_of_entry_type_slot_group,,,,,,,PCDS: Select the point of entry type.,,,,,,,,,,,,,,PCDS: Air,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,travel point of entry type|PCDS:antimicrobial resistance,travel point of entry type slot,,,,GENEPIO:0100413,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-06-25T03:32:51.876Z,,,,,,,,,,,,,,,,,,,travel point of entry type field category,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the type of entry point a traveler arrives through.,,PCDS: The type of entry point a traveler arrives through.,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0338,Tajikistani,,,FALSE,,,,,,,Tajik,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0338,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Tajikistani,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0333,Anguillan,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0333,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Anguillan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0335,Barbadian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0335,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Barbadian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0339,Turkmen,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0339,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Turkmen,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0336,Haitian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0336,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Haitian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0337,Jamaican,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0337,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Jamaican,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0331,Sudanese,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0331,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Sudanese,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0334,Antiguan or Barbudan,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0334,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Antiguan or Barbudan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00005394,lamb breast (raw),,A raw lamb breast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00005394,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lamb breast (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw lamb breast.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03440022,heat-treated,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=F0022,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03440022,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,heat-treated,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000292,watershed,water divide|divide,"The separation between neighbouring drainage basins (catchments). In hilly country, the divide lies along topographical peaks and ridges, but in flat country or on a high plateau (especially where the ground is marshy) the divide may be invisible - just a more or less notional line on the ground on either side of which falling raindrops will start a journey to different rivers, and even to different sides of a country or continent.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Watershed|TGN:21440|SWEETRealm:Watershed|LTER:626|Geonames:T.DVD|FTT:645|FTT:220,,,,,,,,,,,,,,,,,,,,,,,,,water divide|divide,,,,ENVO:00000292,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,watershed,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The separation between neighbouring drainage basins (catchments). In hilly country, the divide lies along topographical peaks and ridges, but in flat country or on a high plateau (especially where the ground is marshy) the divide may be invisible - just a more or less notional line on the ground on either side of which falling raindrops will start a journey to different rivers, and even to different sides of a country or continent.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002749,rinse,,"Rinse is the liquid output of rinsing plant, animal or other material with liquid with the objective of extracting specimen material from that liquid.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002749,,,,,,,,,,,,,,2019-06-28T20:07:25Z,,,,,,,,,,,,,,,,,,,rinse,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0002116,,,,,,,,,,,Damion Dooley,,,,"Rinse is the liquid output of rinsing plant, animal or other material with liquid with the objective of extracting specimen material from that liquid.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001923,Illumina platform,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI SRA: ILLUMINA,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001923,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Illumina platform,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0015232,nematode pharynx,,"The feeding organ, a neuro-muscular pump in the head of the animal, used to ingest food, bacteria suspended in liquid, filter them out, grind them up and transport posteriorly into the instestine.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WBbt:0003681,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0015232,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,nematode pharynx,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The feeding organ, a neuro-muscular pump in the head of the animal, used to ingest food, bacteria suspended in liquid, filter them out, grind them up and transport posteriorly into the instestine.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00002320,tuna food product,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00002320,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,tuna food product,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001853,worsening health trend,deteriorating,,FALSE,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0002026,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,deteriorating,,,,GENEPIO:0001853,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,worsening health trend,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02022271,"chicken breast (bone-in, raw)",,A raw bone-in chicken breast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02022271,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"chicken breast (bone-in, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw bone-in chicken breast.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_2531,hematologic cancer,,"An organ system cancer located in the hematological system that is characterized by uncontrolled cellular proliferation in blood, bone marrow and lymph nodes.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:2531,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,hematologic cancer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An organ system cancer located in the hematological system that is characterized by uncontrolled cellular proliferation in blood, bone marrow and lymph nodes.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001700,listeria serotype 4d,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001700,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,listeria serotype 4d,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00009152,"populated place, Venezuala",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00009152,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Venezuala",http://purl.obolibrary.org/obo/GAZ_00002931,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00009159,Anguilla,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,INSDC:country:anguilla,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00009159,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Anguilla,http://purl.obolibrary.org/obo/GAZ_00003949,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00009150,State (Venezuela),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00009150,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,State (Venezuela),http://purl.obolibrary.org/obo/GAZ_00002931,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100048,medically isolated (negative pressure) datum,,"Medical isolation in a negative pressure environment: 6 to 12 air exchanges per hour, and direct exhaust to the outside or through a high efficiency particulate air filter.",FALSE,,,,,,,Medically Isolated,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100048,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,medically isolated (negative pressure) datum,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Medical isolation in a negative pressure environment: 6 to 12 air exchanges per hour, and direct exhaust to the outside or through a high efficiency particulate air filter.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C16423,Child,Children (0-21)|Children|Child|CHILD,An age group comprised of individuals who are not yet an adult. The specific cut-off age will vary by purpose.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Children (0-21)|Children|Child|CHILD,,,,NCIT:C16423,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Child,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An age group comprised of individuals who are not yet an adult. The specific cut-off age will vary by purpose.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_48901,thiazoles,,An azole in which the five-membered heterocyclic aromatic skeleton contains a N atom and one S atom.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:48901,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,thiazoles,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An azole in which the five-membered heterocyclic aromatic skeleton contains a N atom and one S atom.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00003387,tunnel farming,,Cultivation of plants within a polytunnel or similar tunnel.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00003387,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,tunnel farming,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Cultivation of plants within a polytunnel or similar tunnel.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_8577,ulcerative colitis,,"A colitis that is predominantly confined to the mucosa located_in colon and includes characteristic ulcers, or open sores.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:8577,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,ulcerative colitis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A colitis that is predominantly confined to the mucosa located_in colon and includes characteristic ulcers, or open sores.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001855,1D space,,"A distance metric exists between any two members of a one-dimensional set.
Should have vector as subclass?",FALSE,,,,,,,,,,,,,,"A distance metric exists between any two members of a one-dimensional set.
Should have vector as subclass?",,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0001864,,,,,,,,,,,,,,,,,GENEPIO:0001855,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,1D space,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000123,beef strip loin (boneless),,A group of muscles that extends the length of the top loin adjacent to the spine bone and on top of the finger bone.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000123,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef strip loin (boneless),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A group of muscles that extends the length of the top loin adjacent to the spine bone and on top of the finger bone.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03460223,phosphorus added claim,,A claim that phosphorus has been added to an edible product.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=H0223,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03460223,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,phosphorus added claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A claim that phosphorus has been added to an edible product.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000420,building part,,A building part is a construction which is part of a building.,FALSE,,,,,,,,,,,,,,"Not recommended for annotation. This class is likely to be made into an inferred class as its subclasses are distributed among more meaningful superclasses (i.e. ceiling is_a surface layer). See for example, ""building floor"". The boundaries between building parts may be bona fide or fiat.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01000420,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,building part,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A building part is a construction which is part of a building.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100326,NCBI SRA library selection,library selection,PCDS: Provide the library selection by selecting a value from the pick list. For amplicon sequencing select 'PCR'.,FALSE,,,,,,,PCDS:ncbi_sra_library_selection,,,,,,,PCDS: Provide the library selection by selecting a value from the pick list. For amplicon sequencing select 'PCR'.,,,,,,,,,,,"These metadata fields are defined specifically for use with the NCBI SRA submission template. They are organizational constructs intended to support a particular template and underlying database and should not be reused to model metadata outside the intended context. Where possible, more general, template‑independent terms should be used instead.",,,PCDS: cDNA,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,library selection,NCBI SRA library_selection,,,,GENEPIO:0100326,,,,,,,,,,,,,,2026-01-29T00:00:09.532Z,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0001940,,,,,,NCBI SRA library selection,,,,,,,,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/core/assets/sra/files/SRA_metadata_acc_example.xlsx,,,,,,,,,,,,PCDS: See NCBI SRA template for details.,,,,,,
http://purl.obolibrary.org/obo/CHEBI_47881,3-oxo monocarboxylic acid,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:35949|CHEBI:1619|CHEBI:13600,,,,,,CHEBI:47881,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,3-oxo monocarboxylic acid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000042,drainage canal,canal,Artificial watercourse with no flow or a controlled flow used drainage.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Geonames:H.CNLD|FTT:401|FTT:129,,,,,,,,,,,,,,,,,,,,,,,,canal,,,,,ENVO:00000042,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,drainage canal,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Artificial watercourse with no flow or a controlled flow used drainage.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001200,purpose of sampling details,purpose of sampling details,A data field which describes additional information pertaining to the reason the sample was collected.,FALSE,,,,,,,PCDS:purpose_of_sampling_details,,,,,,,PCDS: Provide a free text description of the sampling strategy or samples collected.,,,,,,,,,,,,,,PCDS: ProvLab/IPC routine monitoring,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,purpose of sampling details,purpose of sampling details slot,,,,GENEPIO:0001200,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,purpose of sampling details,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes additional information pertaining to the reason the sample was collected.,,PCDS: Further details pertaining to the reason the sample was collected.,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530130,basses-cotes,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0130,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530130,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,basses-cotes,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100275,interstate/ interprovincial travel surveillance strategy,,A domestic travel-associated surveillance strategy in which individuals are selected if their travel occurred within a state/province within a nation.,FALSE,,,,,,,Interstate/ interprovincial travel surveillance,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100275,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,interstate/ interprovincial travel surveillance strategy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A domestic travel-associated surveillance strategy in which individuals are selected if their travel occurred within a state/province within a nation.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020463,piece of turkey meat,,A piece of meat that is derived from a turkey.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020463,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of turkey meat,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A piece of meat that is derived from a turkey.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001894,lingual set,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001894,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,lingual set,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100148,MGI DNBSEQ-G400,,A DNA sequencer manufactured by the MGI corporation with an output capacity of 55GB~1440GB per run.,FALSE,,,,,,,MGISEQ-2000|DNBSEQ-G400,,,,,,,"MGISEQ-2000RS is referred to in some academic literature, however this was later rebranded as the DNBSEQ- G400 (now the accepted model name).",,,,,,,https://mgi-tech.eu/sequencing-products/dnbseq-g400,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100148,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,MGI DNBSEQ-G400,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A DNA sequencer manufactured by the MGI corporation with an output capacity of 55GB~1440GB per run.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002087,draft sequence repository data - isolate passage history,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002087,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,draft sequence repository data - isolate passage history,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"order:
GENEPIO:0002078 # number of passages
GENEPIO:0002079 # passage protocol",,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001202,third party laboratory service provider name,third party laboratory service provider label|third party lab service provider name|third party lab service provider label,A data field which describes the name of the third party company or laboratory that provided services.,FALSE,,,,,,,PCDS:third_party_lab_service_provider_name,,,,,,,"PCDS: Provide the full, unabbreviated name of the company or laboratory.",,,,,,,,,,,"Name"" is synonymous with ""Label"" for practical purposes, but we find data collectors and users tend to prefer to specifically use ""Name"" for individuals and organizations.",,,PCDS: Switch Health,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,third party laboratory service provider label|third party lab service provider name|third party lab service provider label,,,,GENEPIO:0001202,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,third party laboratory service provider name,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the name of the third party company or laboratory that provided services.,,PCDS: The name of the third party company or laboratory that provided services.,,,,,,
http://purl.obolibrary.org/obo/DOID_4377,egg allergy,,"A food allergy that is an allergy or hypersensitivity to dietary substances from the yolk or whites of eggs, causing an overreaction of the immune system which may lead to severe physical symptoms.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:4377,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,egg allergy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A food allergy that is an allergy or hypersensitivity to dietary substances from the yolk or whites of eggs, causing an overreaction of the immune system which may lead to severe physical symptoms.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000144,draft whole genome sequencing lab test record,,This is a set of datums involved in laboratory processing of whole-genome-sequenced isolates.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000144,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,draft whole genome sequencing lab test record,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,This is a set of datums involved in laboratory processing of whole-genome-sequenced isolates.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_4157,secondary syphilis,,"A syphilis that is characterized as the second stage of syphilis which appears from 2 to 6 months after primary infection, and is marked by lesions especially in the skin but also in organs and tissues, and that lasts from 3 to 12 weeks.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:4157,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,secondary syphilis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A syphilis that is characterized as the second stage of syphilis which appears from 2 to 6 months after primary infection, and is marked by lesions especially in the skin but also in organs and tissues, and that lasts from 3 to 12 weeks.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000121,travel start date,,The date of a person's departure from their primary residence (at that time) on a journey to one or more other locations.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000121,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,travel start date,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,The date of a person's departure from their primary residence (at that time) on a journey to one or more other locations.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C110959,Not Answered,Not answered|Not Answered,Indicates that no answer was given.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Not answered|Not Answered,,,,NCIT:C110959,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Not Answered,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Indicates that no answer was given.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0002901,Hypocalcemia,Low blood calcium levels|Hypocalcaemia,An abnormally decreased calcium concentration in the blood.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0020598|SNOMEDCT_US:5291005,,,,,,,,,,,,,,,,,,,,,,,,,Low blood calcium levels|Hypocalcaemia,,,,HP:0002901,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Hypocalcemia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An abnormally decreased calcium concentration in the blood.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0002900,Hypokalemia,Low blood potassium levels,An abnormally decreased potassium concentration in the blood.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0020621|SNOMEDCT_US:43339004|SNOMEDCT_US:166690008,,,,,,,,,,,,,,,,,,,,,,,,,Low blood potassium levels,,,,HP:0002900,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Hypokalemia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An abnormally decreased potassium concentration in the blood.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001396,host residence geo loc name country,host residence geo_loc name (country),A host geographical location field which describes the country where the host resides.,FALSE,,,,,,,PCDS:host_residence_geo_loc_name_country,,,,,,,"PCDS: If known, select a value from the pick list.",,,,,,,,,,,,,,PCDS: Canada,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,host residence geo_loc name (country),host residence geographical location country name slot|host residence geographical location country name field|host residence geo_loc name (country) slot,,,,GENEPIO:0001396,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,host residence geo loc name country,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A host geographical location field which describes the country where the host resides.,,PCDS: The country where the host resides.,,,,,,
http://purl.obolibrary.org/obo/CHEBI_26895,tetracyclines,,"A subclass of polyketides having an octahydrotetracene-2-carboxamide skeleton, substituted with many hydroxy and other groups.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:26895,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,tetracyclines,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A subclass of polyketides having an octahydrotetracene-2-carboxamide skeleton, substituted with many hydroxy and other groups.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000101,beef blade chuck roast,,A roast cut from the flat bone portion of the blade that comes from ribs 4 through 5.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000101,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef blade chuck roast,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A roast cut from the flat bone portion of the blade that comes from ribs 4 through 5.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0011139,synovial limb joint,synovial joint of free limb segment,Any synovial joint that is part of a (free) limb.,FALSE,,,,,,,,,,,,,,"Most limb joints are synovial, but a few such as the tibiofibular joints are syndesmoses.",,,,,,,,,,,,,,,,,,FMA:258776,,,,,,,,,,,,,,,,,,,,,,,,,synovial joint of free limb segment,,,,UBERON:0011139,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,synovial limb joint,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any synovial joint that is part of a (free) limb.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001051,NCBI BioSample isolate (human name or description),,Identification or description of the specific individual from which this sample was obtained,FALSE,,,,,,,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/biosample/docs/attributes/,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001051,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI BioSample isolate (human name or description),,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,Identification or description of the specific individual from which this sample was obtained,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001768,4 - annotation-directed improvement,,Annotation-directed improvement: in which genetic information in various gene regions is represented as accurately as possible.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001768,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,4 - annotation-directed improvement,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,Annotation-directed improvement: in which genetic information in various gene regions is represented as accurately as possible.,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000331,Khoekhoe,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000331,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Khoekhoe,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000330,French diaspora,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000330,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,French diaspora,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000337,Kwangali,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000337,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Kwangali,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000339,Makua,,A Bantu Southern population with a population size of 4.037 Millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000339,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Makua,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Bantu Southern population with a population size of 4.037 Millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000338,Lemba,,The Lemba are a Bantu Southern population with a population size of 0.05 million,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000338,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Lemba,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The Lemba are a Bantu Southern population with a population size of 0.05 million,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000332,San,,A Southern African population with a population size of 0.1 million,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000332,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,San,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Southern African population with a population size of 0.1 million,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000334,Taa,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000334,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Taa,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000335,Banareng,,People of the place of the buffalo,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000335,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Banareng,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,People of the place of the buffalo,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000333,Khoisan South,,"A Khoekhoe, San population with a population size of 0.4 millions",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000333,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Khoisan South,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A Khoekhoe, San population with a population size of 0.4 millions",,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000336,Himba,,The Himba are a Bantu Southern population with a population size of 0.05 million.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000336,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Himba,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The Himba are a Bantu Southern population with a population size of 0.05 million.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100648,tophit strain determination,,PCDS: Enter the EZBioCloud strain best-hit.,FALSE,,,,,,,PCDS:tophit_strain_determination,,,,,,,PCDS: Enter the EZBioCloud strain best-hit.,,,,,,,,,,,,,,PCDS: MSHR1132(T),,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100648,,,,,,,,,,,,,,2026-04-13T17:16:47.336Z,,,,,,,,,,,,,,,,,,,tophit strain determination,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PCDS: The strain designation derived from the top hit in search results produced from a sequence similarity comparison.,,,,,,
http://purl.obolibrary.org/obo/DOID_3055,paratyphoid fever,,"A primary bacterial infectious disease that results_in infection located_in intestine, has_material_basis_in Salmonella enterica subsp enterica serovar Paratyphi A, B or C, which are transmitted_by ingestion of contaminated food. The infection has_symptom fever, has_symptom headache, has_symptom abdominal pain, has_symptom malaise, has_symptom anorexia, has_symptom constipation, has_symptom rosy spots on the central body, has_symptom non productive cough (in early stage of illness), has_symptom bradycardia, and has_symptom hepatosplenomegaly.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:3055,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,paratyphoid fever,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A primary bacterial infectious disease that results_in infection located_in intestine, has_material_basis_in Salmonella enterica subsp enterica serovar Paratyphi A, B or C, which are transmitted_by ingestion of contaminated food. The infection has_symptom fever, has_symptom headache, has_symptom abdominal pain, has_symptom malaise, has_symptom anorexia, has_symptom constipation, has_symptom rosy spots on the central body, has_symptom non productive cough (in early stage of illness), has_symptom bradycardia, and has_symptom hepatosplenomegaly.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001139,biosample accession,biosample_accession|biosample accession,An identifier field which describes the identifier assigned to a BioSample in International Nucleotide Sequence Database Collaboration (INSDC) archives.,FALSE,,,,,,,PCDS:biosample_accession,,,,,,,PCDS: Store the accession returned from the BioSample submission. NCBI BioSamples will have the prefix SAMN.,,,,,,,,,,,,,,PCDS: SAMN14180202,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,biosample_accession|biosample accession,biosample accession slot,,,,GENEPIO:0001139,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,biosample accession,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An identifier field which describes the identifier assigned to a BioSample in International Nucleotide Sequence Database Collaboration (INSDC) archives.,,"PCDS: The identifier assigned to a BioSample in INSDC (i.e., ENA, NCBI, or DDBJ) archives.",,,,,,
http://purl.obolibrary.org/obo/HP_0012531,Pain,Pain,"An unpleasant sensory and emotional experience associated with actual or potential tissue damage, or described in terms of such damage.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0030193|SNOMEDCT_US:22253000,,,,,,,,,,,,,,,,,,,,,,,,,Pain,,,,HP:0012531,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Pain,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An unpleasant sensory and emotional experience associated with actual or potential tissue damage, or described in terms of such damage.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490160,"aluminum tray or pan, plastic cover or wrapping",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0160,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490160,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"aluminum tray or pan, plastic cover or wrapping",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03450005,food baking,,"Cooked without moisture, covered or uncovered, in an oven.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=G0005,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03450005,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food baking,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Cooked without moisture, covered or uncovered, in an oven.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00004493,piece of pig,,A severed part of a pork.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00004493,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of pig,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A severed part of a pork.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001913,tens,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001913,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0001912,,,,,,,,,,,tens,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02010028,piece of animal (with skin),,A piece of animal that contains skin.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02010028,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of animal (with skin),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A piece of animal that contains skin.,,,,,,,,
http://purl.obolibrary.org/obo/OBA_2040158,age of onset of systemic lupus erythematosus,age systemic lupus erythematosus symptoms begin|age at onset of systemic lupus erythematosus,The age at which systemic lupus erythematosus manifestations first appear.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,age systemic lupus erythematosus symptoms begin|age at onset of systemic lupus erythematosus,,,,OBA:2040158,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age of onset of systemic lupus erythematosus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The age at which systemic lupus erythematosus manifestations first appear.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530154,domestic or cultivated food production,,An agricultural production process involving a domesticated organism.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0154,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530154,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,domestic or cultivated food production,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An agricultural production process involving a domesticated organism.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C85555,Agar Dilution Method,Agar Dilution Method|AGAR DILUTION,A method to determine microbial susceptibility to antibiotics in which test bacteria is inoculated onto agar plates with serial dilutions of know quantities of antibiotics. The minimum inhibitory concentration of antibiotic is assessed.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Agar Dilution Method|AGAR DILUTION,,,,NCIT:C85555,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Agar Dilution Method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A method to determine microbial susceptibility to antibiotics in which test bacteria is inoculated onto agar plates with serial dilutions of know quantities of antibiotics. The minimum inhibitory concentration of antibiotic is assessed.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001021,obsolete: specialty/ethnic store,,A specialty/ethnic food store is a store specializing in a particular variety of food or food of cultural / regional origin.,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001021,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: specialty/ethnic store,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,http://purl.obolibrary.org/obo/ENVO_01000988,,,A specialty/ethnic food store is a store specializing in a particular variety of food or food of cultural / regional origin.,,,,,,,,
http://www.ebi.ac.uk/efo/EFO_0000638,overall survival,,A measurement of the survival rate for a group of individuals suffering from a disease.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,efo:EFO_0000638,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,overall survival,,,,,,,,,,,,,,,,,,,,,,,,,,,,James Malone,,,,A measurement of the survival rate for a group of individuals suffering from a disease.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001163,obsolete distribution event,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,Unclear semantics and origin,,,,,,,,,,,,,,,,,,,GENEPIO:0001163,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete distribution event,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000058,Stx2 Toxin PCR result,,A qPCR measurement result of Stx2 gene amplification.,FALSE,,,,,,,,,,,,,,,,,,,,,GROUP: IRIDA Ontology (Emma),,,,,,,CT value?,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000058,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,http://purl.obolibrary.org/obo/OMIT_0020918,,,,,,Stx2 Toxin PCR result,,,,,Lab Analytic,,,,,,,,,,,,,,,,,,,,,,Stx2 Toxin PCR result,,,NML Labware LIMS,,A qPCR measurement result of Stx2 gene amplification.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C115935,Healthy,Well|Healthy,Having no significant health-related issues.,FALSE,,,,,http://purl.obolibrary.org/obo/GENEPIO_0001840,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Well|Healthy,,,,NCIT:C115935,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Healthy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Having no significant health-related issues.,,,,healthy,,,,
http://purl.obolibrary.org/obo/FOODON_02000284,pork leg (raw),,A raw pork leg.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000284,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pork leg (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw pork leg.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0004887,Respiratory failure requiring assisted ventilation,Respiratory distress requiring mechanical ventilation|Respiratory distress requiring endotracheal intubation|Respiratory distress necessitating mechanical ventilation,A state of respiratory distress that requires a life saving intervention in the form of gaining airway access and instituting positive pressure ventilation.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4025279,,,,,,,,,,,,,,,,,,,,,,,HP:0004883,,Respiratory distress requiring mechanical ventilation|Respiratory distress requiring endotracheal intubation|Respiratory distress necessitating mechanical ventilation,,,,HP:0004887,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Respiratory failure requiring assisted ventilation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A state of respiratory distress that requires a life saving intervention in the form of gaining airway access and instituting positive pressure ventilation.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0001627,Abnormal heart morphology,Heart defect|Congenital heart defects|Congenital heart defect|Cardiac anomaly|Cardiac anomalies|Cardiac abnormality|Abnormally shaped heart|Abnormality of the heart|Abnormality of cardiac morphology,Any structural anomaly of the heart.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0152021|UMLS:C0018798|SNOMEDCT_US:13213009,,,,,,,,,,,,,,,,,,,,,,,HP:3000001,,Heart defect|Congenital heart defects|Congenital heart defect|Cardiac anomaly|Cardiac anomalies|Cardiac abnormality|Abnormally shaped heart|Abnormality of the heart|Abnormality of cardiac morphology,,,,HP:0001627,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal heart morphology,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any structural anomaly of the heart.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0001626,Abnormality of the cardiovascular system,Cardiovascular abnormality|Abnormality of the cardiovascular system,Any abnormality of the cardiovascular system.,FALSE,,,,,,,,,,,,,,"The cardiovascular system consists of the heart, vasculature, and the lymphatic system.",,,,,,,,,,,,,,,,,,UMLS:C0243050|UMLS:C0007222|SNOMEDCT_US:49601007,,,,,,,,,,,,,,,,,,,,,,,HP:0003116|HP:0003114,,Cardiovascular abnormality|Abnormality of the cardiovascular system,,,,HP:0001626,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormality of the cardiovascular system,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any abnormality of the cardiovascular system.,,,,,,,,
http://purl.obolibrary.org/obo/BTO_0004755,VERO C1008 cell,,This line is a clone of VERO 76.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,BTO:0004755,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/bto.owl,,,,,,,,,VERO C1008 cell,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,This line is a clone of VERO 76.,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_7742,Vertebrata <vertebrates>,,,FALSE,,,,,,,vertebrates|Vertebrata,,,,,,,,,,,,,,,,,,,Vertebrata <vertebrates>,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/PATO_0001894,,,,,,,,,,,,,,,NCBITaxon:7742,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Vertebrata <vertebrates>,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0005423,developing anatomical structure,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MIAA:0000019|FMA:292313|FBbt:00007006|EHDAA2:0003125|CALOHA:TS-2122|AEO:0000125,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0005423,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,developing anatomical structure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_33299,alkaline earth molecular entity,,An alkaline earth molecular entity is a molecular entity containing one or more atoms of an alkaline earth metal.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:33299,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,alkaline earth molecular entity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An alkaline earth molecular entity is a molecular entity containing one or more atoms of an alkaline earth metal.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00003301,beef loin,,A beef primal cut that comes from the area below the backbone .,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00003301,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef loin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A beef primal cut that comes from the area below the backbone .,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470171,food cryogenic freezing,,Frozen very rapidly by means of refrigerating agents such as liquid nitrogen or carbon dioxide. Example: lobster frozen in liquid nitrogen.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0171,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470171,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food cryogenic freezing,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Frozen very rapidly by means of refrigerating agents such as liquid nitrogen or carbon dioxide. Example: lobster frozen in liquid nitrogen.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C16576,Female,female|Female|FEMALE|F,An individual who belongs to the sex that normally produces ova.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,female|Female|FEMALE|F,,,,NCIT:C16576,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Female,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An individual who belongs to the sex that normally produces ova.,,,,,,,,
http://purl.obolibrary.org/obo/PATO_0000165,time,,A quality in which events occur in sequence.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PATO:0000165,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/vo.owl,http://purl.oboInOwlInOwllibrary.org/oboInOwlInOwl/pato#scalar_slim|http://purl.oboInOwlInOwllibrary.org/oboInOwlInOwl/pato#attribute_slim,,,,,,,,time,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A quality in which events occur in sequence.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100829,minimum posttrimming read length,minimum post-trimming read length,A data field which describes the threshold used as a cut-off for the minimum length of a read after trimming.,FALSE,,,,,,,PCDS:minimum_posttrimming_read_length,,,,,,,PCDS: Provide a numerical value (no need to include units).,,,,,,,,,,,,,,PCDS: 150,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,minimum post-trimming read length,minimum post-trimming read length slot,,,,GENEPIO:0100829,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,minimum posttrimming read length,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the threshold used as a cut-off for the minimum length of a read after trimming.,,PCDS: The threshold used as a cut-off for the minimum length of a read after trimming.,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000280,lamb tenderloin (raw),,A raw lamb tenderloin cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000280,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lamb tenderloin (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw lamb tenderloin cut.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_50996,tertiary amino compound,,A compound formally derived from ammonia by replacing three hydrogen atoms by organyl groups.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:50996,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,tertiary amino compound,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A compound formally derived from ammonia by replacing three hydrogen atoms by organyl groups.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00003389,industrial livestock production,,"An approach to animal husbandry designed to maximize production, while minimizing costs by keeping livestock such as cattle, poultry, and fish at high stocking densities, at large scale, and using automated feeding systems.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00003389,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,industrial livestock production,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An approach to animal husbandry designed to maximize production, while minimizing costs by keeping livestock such as cattle, poultry, and fish at high stocking densities, at large scale, and using automated feeding systems.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490171,"aluminum tube, top lined with cork",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0171,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490171,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"aluminum tube, top lined with cork",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00002742,tuna fillet,,A fillet cut of a tuna fish.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00002742,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,tuna fillet,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A fillet cut of a tuna fish.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001455,sequencing kit number,sequencing kit number,A data field which describes the manufacturer's kit number.,FALSE,,,,,,,PCDS:sequencing_kit_number,,,,,,,PCDS: Alphanumeric value.,,,,,,,,,,,,,,PCDS: AB456XYZ789,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,sequencing kit number,sequencing kit number slot,,,,GENEPIO:0001455,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,sequencing kit number,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the manufacturer's kit number.,,PCDS: The manufacturer's kit number.,,,,,,
http://purl.obolibrary.org/obo/GAZ_00004762,"populated place, New Zealand",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00004762,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, New Zealand",http://purl.obolibrary.org/obo/GAZ_00000469,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02010108,piece of animal meat (raw),,A raw piece of animal meat.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02010108,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of animal meat (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw piece of animal meat.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03460225,food component addition process,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=H0225,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03460225,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food component addition process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02010109,piece of animal meat (skinless),,A piece of skinless animal meat.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02010109,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of animal meat (skinless),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A piece of skinless animal meat.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000131,note,,A note is text that provides human-readable information on one or more subjects.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000131,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,note,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A note is text that provides human-readable information on one or more subjects.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0007100,primary circulatory organ,heart|dorsal tube,"A hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood or analogs[GO,modified].",FALSE,,,,,,,,,,,,,,"Gene notes: Bmp, Nkx, Gata",,,,,,,,,,,,,,,,,,http://www.sciencemag.org/content/313/5795/1922/F1.large.jpg|TADS:0000147,,,,,,,,,,,,,,,,,,,,,,,,,,heart|dorsal tube,,,UBERON:0007100,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,primary circulatory organ,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood or analogs[GO,modified].",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0007109,meconium,,A dark greenish mass that accumulates in the bowel during fetal life and is discharged shortly after birth.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ncithesaurus:Meconium|MESH:D008470|BTO:0000838,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0007109,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,meconium,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A dark greenish mass that accumulates in the bowel during fetal life and is discharged shortly after birth.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001356,specimen history item,,A specimen history item is a time-related datum about a particular specimen,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001356,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,specimen history item,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A specimen history item is a time-related datum about a particular specimen,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002032,consent datum,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002032,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,consent datum,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0003286,foregut region of duodenum,foregut duodenum,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,EMAPA:17178|EHDAA:3830|EHDAA2:0000560,,,,,,,,,,,,,,,,,,,,,,,,,foregut duodenum,,,,UBERON:0003286,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,foregut region of duodenum,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0003287,midgut region of duodenum,midgut duodenum,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,EMAPA:17193|EHDAA:3937|EHDAA2:0001189,,,,,,,,,,,,,,,,,,,,,,,,,midgut duodenum,,,,UBERON:0003287,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,midgut region of duodenum,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_55370,imidazolidinone,,An imidazolidine containing one or more oxo groups.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:55370,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,imidazolidinone,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An imidazolidine containing one or more oxo groups.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_35350,hydroxy steroid,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:5814|CHEBI:24748,,,,,,CHEBI:35350,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,hydroxy steroid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038736,juxta-arterial ileal lymph node,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:277616,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0038736,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,juxta-arterial ileal lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038734,visceral pre-aortic lymph node,visceral preaortic lymph node|visceral pre-aortic node|visceral para-aortic lymph node,Intestinal lymph node located anterior to aorta.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:277610,,,,,,,,,,,,,,,,,,,,,,,,,visceral preaortic lymph node|visceral pre-aortic node|visceral para-aortic lymph node,,,,UBERON:0038734,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,visceral pre-aortic lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Intestinal lymph node located anterior to aorta.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038735,juxta-arterial jejunal lymph node,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:277614,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0038735,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,juxta-arterial jejunal lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038738,intermediate ileal lymph node,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:277620,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0038738,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,intermediate ileal lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038737,intermediate jejunal lymph node,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:277618,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0038737,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,intermediate jejunal lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/OMIT_0022766,Plant Lectins,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OMIT:0022766,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/omit.owl,,,,,,,,,Plant Lectins,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/OMIT_0022765,Lectins,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OMIT:0022765,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/omit.owl,,,,,,,,,Lectins,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HP_0012638,Abnormal nervous system physiology,Abnormality of nervous system physiology,A functional anomaly of the nervous system.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4022811,,,,,,,,,,,,,,,,,,,,,,,,,Abnormality of nervous system physiology,,,,HP:0012638,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal nervous system physiology,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A functional anomaly of the nervous system.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0012639,Abnormal nervous system morphology,Abnormality of nervous system morphology|Abnormal shape of nervous system,A structural anomaly of the nervous system.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4022810|Fyler:4300|Fyler:4135,,,,,,,,,,,,,,,,,,,,,,,,,Abnormality of nervous system morphology|Abnormal shape of nervous system,,,,HP:0012639,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal nervous system morphology,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A structural anomaly of the nervous system.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100282,gisaid virus name,GISAID virus name,An identifier field which describes the user-defined Global Initiative on Sharing Avian Influenza Data (GISAID) virus name assigned to the sequence.,FALSE,,,,,,,PCDS:gisaid_virus_name,,,,,,,PCDS: GISAID virus names should be in the format 'hCoV-19/Country/Identifier/year'.,,,,,,,,,,,,,,PCDS: A/Ontario/Canada/ABCD1234/2023,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,GISAID virus name,Global Initiative on Sharing Avian Influenza Data virus name slot|Global Initiative on Sharing Avian Influenza Data virus name field|GISAID virus name slot,,,,GENEPIO:0100282,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,gisaid virus name,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An identifier field which describes the user-defined Global Initiative on Sharing Avian Influenza Data (GISAID) virus name assigned to the sequence.,,PCDS: Identifier of the specific isolate.,,,,,,
http://purl.obolibrary.org/obo/GAZ_01000022,Takhtajan's floristic provinces,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:01000022,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Takhtajan's floristic provinces,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_01000021,floristic kingdom,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:01000021,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,floristic kingdom,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_01000020,biogeographic location,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:01000020,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,biogeographic location,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020232,"chicken breast (skinless, raw)",,A raw skinless chicken breast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020232,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"chicken breast (skinless, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw skinless chicken breast.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0025337,Red eye,Red eyes|Red eye,A reddish appearance over the white part (sclera) of the eye ranging from a few enlarged blood vessels appearing as wiggly lines over the sclera to a bright red color completely covering to sclera.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Red eyes|Red eye,,,,HP:0025337,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Red eye,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A reddish appearance over the white part (sclera) of the eye ranging from a few enlarged blood vessels appearing as wiggly lines over the sclera to a bright red color completely covering to sclera.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03460232,alcohol fermentation,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=H0232,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03460232,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,alcohol fermentation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100957,manual composite sampling,,A method of composite sampling in which multiple grab samples from discrete time points are taken and then combined to produce a single composite sample.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100957,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-11-20T16:24:25Z,,,,,,,,,,,,,,,,,,,manual composite sampling,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A method of composite sampling in which multiple grab samples from discrete time points are taken and then combined to produce a single composite sample.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0666,"Luhya in Webuye, Kenya (1KGP)",Luhya|LWK,"A population made up of 117 samples from Luhya individuals recruited in Webuye, Kenya as part of the 1000 Genomes Project. The population was assigned by the collecting project to the superpopulation African.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Luhya|LWK,,,,HANCESTRO:0666,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,"Luhya in Webuye, Kenya (1KGP)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A population made up of 117 samples from Luhya individuals recruited in Webuye, Kenya as part of the 1000 Genomes Project. The population was assigned by the collecting project to the superpopulation African.",,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0668,"Yoruba in Ibadan, Nigeria  (1KGP)",Yoruba|YRI,"A population made up of 187 samples from Yoruba individuals recruited in Ibadan, Nigeria as part of the 1000 Genomes Project. The population was assigned by the collecting project to the superpopulation African.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Yoruba|YRI,,,,HANCESTRO:0668,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,"Yoruba in Ibadan, Nigeria  (1KGP)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A population made up of 187 samples from Yoruba individuals recruited in Ibadan, Nigeria as part of the 1000 Genomes Project. The population was assigned by the collecting project to the superpopulation African.",,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0663,"Gambian in Western Division, The Gambia - Jola (GGVP)",Gambian Jola|GWJ,"A population made up of 100 samples from Jola individuals recruited in Western Division, The Gambia as part of the Gambian Genome Variation Project. The population was assigned by the collecting project to the superpopulation African.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Gambian Jola|GWJ,,,,HANCESTRO:0663,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,"Gambian in Western Division, The Gambia - Jola (GGVP)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A population made up of 100 samples from Jola individuals recruited in Western Division, The Gambia as part of the Gambian Genome Variation Project. The population was assigned by the collecting project to the superpopulation African.",,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0661,Esan in Nigeria (1KGP),Esan|ESN,A population made up of 173 samples from Esan individuals recruited in Nigeria as part of the 1000 Genomes Project. The population was assigned by the collecting project to the superpopulation African.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Esan|ESN,,,,HANCESTRO:0661,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Esan in Nigeria (1KGP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 173 samples from Esan individuals recruited in Nigeria as part of the 1000 Genomes Project. The population was assigned by the collecting project to the superpopulation African.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0664,"Gambian in Western Division, The Gambia - Mandinka (GGVP)",Gambian Mandinka|GWD,"A population made up of 280 samples from Mandinka individuals recruited in Western Division, The Gambia as part of the 1000 Genomes Project. The population was assigned by the collecting project to the superpopulation African.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Gambian Mandinka|GWD,,,,HANCESTRO:0664,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,"Gambian in Western Division, The Gambia - Mandinka (GGVP)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A population made up of 280 samples from Mandinka individuals recruited in Western Division, The Gambia as part of the 1000 Genomes Project. The population was assigned by the collecting project to the superpopulation African.",,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0667,Mende in Sierra Leone (1KGP),Mende|MSL,A population made up of 129 samples from Mende individuals recruited in Sierra Leone as part of the 1000 Genomes Project. The population was assigned by the collecting project to the superpopulation African.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Mende|MSL,,,,HANCESTRO:0667,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Mende in Sierra Leone (1KGP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 129 samples from Mende individuals recruited in Sierra Leone as part of the 1000 Genomes Project. The population was assigned by the collecting project to the superpopulation African.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0665,"Gambian in Western Division, The Gambia - Wolof (GGVP)",Gambian Wolof|GWW,"A population made up of 100 samples from Wolof individuals recruited in Western Division, The Gambia as part of the Gambian Genome Variation Project. The population was assigned by the collecting project to the superpopulation African.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Gambian Wolof|GWW,,,,HANCESTRO:0665,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,"Gambian in Western Division, The Gambia - Wolof (GGVP)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A population made up of 100 samples from Wolof individuals recruited in Western Division, The Gambia as part of the Gambian Genome Variation Project. The population was assigned by the collecting project to the superpopulation African.",,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0669,Colombian in Colombia (HGDP),Colombian,A population made up of 5 samples from Colombian individuals recruited in Colombia as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Latin or Admixed American.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Colombian,,,,HANCESTRO:0669,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Colombian in Colombia (HGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 5 samples from Colombian individuals recruited in Colombia as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Latin or Admixed American.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0662,"Gambian in Western Division, The Gambia - Fula (GGVP)",Gambian Fula|GWF,"A population made up of 100 samples from Fula individuals recruited in Western Division, The Gambia as part of the Gambian Genome Variation Project. The population was assigned by the collecting project to the superpopulation African.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Gambian Fula|GWF,,,,HANCESTRO:0662,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,"Gambian in Western Division, The Gambia - Fula (GGVP)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A population made up of 100 samples from Fula individuals recruited in Western Division, The Gambia as part of the Gambian Genome Variation Project. The population was assigned by the collecting project to the superpopulation African.",,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0660,African Caribbean in Barbados (1KGP),African Caribbean|ACB,A population made up of 123 samples from African Caribbean individuals recruited in Barbados as part of the 1000 Genomes Project. The population was assigned by the collecting project to the superpopulation African.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,African Caribbean|ACB,,,,HANCESTRO:0660,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,African Caribbean in Barbados (1KGP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 123 samples from African Caribbean individuals recruited in Barbados as part of the 1000 Genomes Project. The population was assigned by the collecting project to the superpopulation African.,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_species,obsolete species,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete species,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:species,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,obsolete species,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000134,beef strip fillet (raw),,A raw beef strip fillet.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000134,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef strip fillet (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef strip fillet.,,,,,,,,
http://purl.obolibrary.org/obo/SO_0000110,sequence_feature,sequence feature|located_sequence_feature|INSDC_note:sequence_feature|INSDC_note:other|INSDC_feature:misc_feature,Any extent of continuous biological sequence.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,sequence feature|located_sequence_feature|INSDC_note:sequence_feature|INSDC_note:other|INSDC_feature:misc_feature,,,,SO:0000110,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/so.owl,http://purl.oboInOwllibrary.org/oboInOwl/so#SOFA,,,,,,,,sequence_feature,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any extent of continuous biological sequence.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_46942,oxanes,,Any organic heteromonocyclic compoundthat is oxane or its substituted derivatives.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:46942,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,oxanes,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any organic heteromonocyclic compoundthat is oxane or its substituted derivatives.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100629,geographical location field,geographical location column|geo_loc slot|geo_loc field,A data field which describes a geographical location.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,(2026-02-28) Under review for deprecation.,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,geographical location column|geo_loc slot|geo_loc field,geographical location slot,,,,GENEPIO:0100629,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788,2022-12-22T00:55:53.808Z,,,,,,,,,,,,,,,,,,,geographical location field,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes a geographical location.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_37716,mixed diacylamine,,"Any imide in which the acyl substituents are any two from carboacyl, sulfonyl and phosphoryl",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:37716,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,mixed diacylamine,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Any imide in which the acyl substituents are any two from carboacyl, sulfonyl and phosphoryl",,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0386,Russian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0386,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Russian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0388,Sammarinese,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0388,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Sammarinese,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0382,Portugese,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0382,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Portugese,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0381,Polish,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0381,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Polish,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0389,Serb,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0389,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Serb,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0387,Saint-Pierrais or Miquelonnais,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0387,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Saint-Pierrais or Miquelonnais,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0380,Norwegian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0380,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Norwegian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0385,Romanian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0385,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Romanian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0383,Irish,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0383,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Irish,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0384,Moldovan,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0384,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Moldovan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0002254,syndromic disease,"syndromic disease or disorder|syndromic disease|syndromes|syndrome associated with disease or disorder|syndrome|symptom clusters|symptom cluster|clusters, symptom|cluster, symptom","A group of signs, symptoms, and clinicopathological characteristics that may or may not have a genetic basis and collectively define an abnormal condition.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0039082|OGMS:0000086|NCIT:C28193|MESH:D013577|MEDGEN:11688|DOID:225,,,,,,,,,,,,,,,,,,,,,,,,,"syndromic disease or disorder|syndromic disease|syndromes|syndrome associated with disease or disorder|syndrome|symptom clusters|symptom cluster|clusters, symptom|cluster, symptom",,,,MONDO:0002254,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#rare_grouping|http://purl.oboInOwllibrary.org/oboInOwl/mondo#harrisons_view,,,,,,,,syndromic disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A group of signs, symptoms, and clinicopathological characteristics that may or may not have a genetic basis and collectively define an abnormal condition.",,,,,,,,
http://purl.obolibrary.org/obo/GEO_000000788,geodetic datum,,"A coordinate system, and a set of reference points, used to locate places on the Earth (or similar objects).",FALSE,,,,,,http://purl.obolibrary.org/obo/RBO_00000017,,,,,,,,"Damion Dooley's note: This coordinate system must reference the particulars of a spheroid - its ""radius = fn(lat,long)"" formula - in order to yeild any distance metrics.

Alternate definition: A geographic coordinate system is a 2 dimensional coordinate system superimposed onto the surface of a spheroid.",,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0001907,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GEO:000000788,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,geodetic datum,,,,,,,,,,,,,,,,,,,,,,,,,,,,William R. Hogan|Josh Hanna,,,,"A coordinate system, and a set of reference points, used to locate places on the Earth (or similar objects).",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00004476,beef sub-primal cut,,A smaller cut of beef that is obtained from the larger primal cut of beef.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00004476,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef sub-primal cut,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A smaller cut of beef that is obtained from the larger primal cut of beef.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0286,Central Asian ancestry,Central Asian,Includes individuals who either self-report or have been described by authors as Central Asian. We note that there does not appear to be a suitable reference population for this population and efforts are required to fill this gap.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Central Asian,,,,HANCESTRO:0286,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Central Asian ancestry,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Includes individuals who either self-report or have been described by authors as Central Asian. We note that there does not appear to be a suitable reference population for this population and efforts are required to fill this gap.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_75769,B vitamin,,"Any member of the group of eight water-soluble vitamins originally thought to be a single compound (vitamin B) that play important roles in cell metabolism. The group comprises of vitamin B<small><sub>1</sub></small>, B<small><sub>2</sub></small>, B<small><sub>3</sub></small>, B<small><sub>5</sub></small>, B<small><sub>6</sub></small>, B<small><sub>7</sub></small>, B<small><sub>9</sub></small>, and B<small><sub>12</sub></small> (Around 20 other compounds were once thought to be B vitamins but are no longer classified as such).",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:75769,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,B vitamin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Any member of the group of eight water-soluble vitamins originally thought to be a single compound (vitamin B) that play important roles in cell metabolism. The group comprises of vitamin B<small><sub>1</sub></small>, B<small><sub>2</sub></small>, B<small><sub>3</sub></small>, B<small><sub>5</sub></small>, B<small><sub>6</sub></small>, B<small><sub>7</sub></small>, B<small><sub>9</sub></small>, and B<small><sub>12</sub></small> (Around 20 other compounds were once thought to be B vitamins but are no longer classified as such).",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100777,water catchment area human population density unit,water catchment human population density unit,An environmental data field which describes the unit for the number of humans per geographical area in a water catchment.,FALSE,,,,,,,PCDS:water_catchment_area_human_population_density_unit,,,,,,,PCDS: Provide the unit of the population density in the catchement area.,,,,,,,,,,,,,,PCDS: persons per Km^2,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,water catchment human population density unit,water catchment human population density unit slot,,,,GENEPIO:0100777,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,water catchment area human population density unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the unit for the number of humans per geographical area in a water catchment.,,PCDS: The unit describing the number of humans per geographical area in a water catchment.,,,,,,
http://purl.obolibrary.org/obo/HP_0002250,Abnormal large intestine morphology,Abnormality of the large intestine,Any abnormality of the large intestine.,FALSE,,,,,,,,,,,,,,The large intestine comprises the cecum and colon.,,,,,,,,,,,,,,,,,,UMLS:C4025715,,,,,,,,,,,,,,,,,,,,,,,,,Abnormality of the large intestine,,,,HP:0002250,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal large intestine morphology,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any abnormality of the large intestine.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0002254,Intermittent diarrhea,Intermittent diarrhoea|Episodic diarrhoea|Episodic diarrhea,Repeated episodes of diarrhea separated by periods without diarrhea.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0239181,,,,,,,,,,,,,,,,,,,,,,,,,Intermittent diarrhoea|Episodic diarrhoea|Episodic diarrhea,,,,HP:0002254,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Intermittent diarrhea,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Repeated episodes of diarrhea separated by periods without diarrhea.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001674,contact specification - physician,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0001679,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001674,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/NCIT_C25741,,,,,,contact specification - physician,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00005162,iron rich label claim,,A food product containing a quantity of iron large enough to make a significant contribution to nutritional needs.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00005162,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,iron rich label claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A food product containing a quantity of iron large enough to make a significant contribution to nutritional needs.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0005079,eggshell,egg shell,"A product of the somatic follicle cell epithelium and a structure that supports the egg in a hostile environment, minimizing water loss whilst allowing gas exchanges essential for embryonic respiration[GO].",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Eggshell|WBbt:0005843|MESH:D004528|BTO:0001716|http://www.langual.org/langual_thesaurus.asp?termid=N0052|http://www.langual.org/langual_thesaurus.asp?termid=C0278,,,,,,,,,,,,,,,,,,,,,,,,,egg shell,,,,UBERON:0005079,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl|http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,eggshell,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A product of the somatic follicle cell epithelium and a structure that supports the egg in a hostile environment, minimizing water loss whilst allowing gas exchanges essential for embryonic respiration[GO].",,,,,,,,
http://purl.obolibrary.org/obo/ENVO_02000019,bodily fluid material,,"An organic material which is primarily composed of some natural bodily fluid or secretion such as blood, semen, saliva, blood plasma, intracellular and interstitial fluids.",FALSE,,,,,,,,,,,,,,"ENVO bodily fluid classes differ from UBERON's treatment of bodily fluids. UBERON refers to the substance itself (""S""). We assert that UBERON's classes are the primary compositional component of the terms in ENVO (""S material""). Use of the ENVO terms is typically recommended when you wish to indicate that there may be other materials intermixed with S.",,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Bodily_fluid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:02000019,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,bodily fluid material,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An organic material which is primarily composed of some natural bodily fluid or secretion such as blood, semen, saliva, blood plasma, intracellular and interstitial fluids.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C40978,Telephone Number,Telephone Number|Telephone|Phone Number|Phone,A sequence of decimal digits (0-9) that is used for identifying a destination telephone line or other device in a telephone network.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Telephone Number|Telephone|Phone Number|Phone,,,,NCIT:C40978,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Telephone Number,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A sequence of decimal digits (0-9) that is used for identifying a destination telephone line or other device in a telephone network.,,,,phone,,,,
http://purl.obolibrary.org/obo/ENVO_00004638,sawmill,,A building within which logs are cut into lumber products.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00004638,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,sawmill,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A building within which logs are cut into lumber products.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03480045,"packed in gravy or sauce, fruit",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=K0045,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03480045,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"packed in gravy or sauce, fruit",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00002222,food shop,,A shop in which a business offers food products for sale or trade.,FALSE,,,,,,,,,,,,,,Whether food is the primary product offered by the business or simply one of the products it offers is not specified in this class.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00002222,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,food shop,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A shop in which a business offers food products for sale or trade.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001175,animal role,,,FALSE,,,,,,,,,,,,,http://purl.obolibrary.org/obo/NCBITaxon_33213,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001175,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,animal role,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020695,piece of poultry (raw),,A raw piece of poultry.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020695,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of poultry (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw piece of poultry.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03500016,enamel surface for fruit (f-enamel),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=N0016,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03500016,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,enamel surface for fruit (f-enamel),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490344,"paperboard container, surface treated outside",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0344,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490344,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"paperboard container, surface treated outside",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00005410,pork center cut-chop (boneless),,A pork chop that is derived from the center portion (blade and sirloin removed). The center-cut chop includes both the ribeye chop and the the New york chop.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00005410,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pork center cut-chop (boneless),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A pork chop that is derived from the center portion (blade and sirloin removed). The center-cut chop includes both the ribeye chop and the the New york chop.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0001608,Abnormality of the voice,Voice abnormality|Abnormality of the voice,"This term describes any abnormality of the voice, i.e., of the sounds produced by humans by the passage of air through the larynx and over the vocal cords, and then modified by the resonance organs, the nasopharynx, and the mouth.",FALSE,,,,,,,,,,,,,,"This term describes any abnormality of the voice, i.e., of the sounds produced by humans by the passage of air through the larynx and over the vocal cords, and then modified by the resonance organs, the nasopharynx, and the mouth.",,,,,,,,,,,,,,,,,,UMLS:C4021776,,,,,,,,,,,,,,,,,,,,,,,,,Voice abnormality|Abnormality of the voice,,,,HP:0001608,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormality of the voice,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000469,research facility,,"A facility, permanent or temporary, on land, in air, space or water, where scientific research or measurements can be undertaken.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00000469,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,research facility,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A facility, permanent or temporary, on land, in air, space or water, where scientific research or measurements can be undertaken.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00004336,fungus material,,Material which derives from one or more fungai.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00004336,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,fungus material,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Material which derives from one or more fungai.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100095,secondary staph infection,,"A infection caused by staphylococcus bacteria, bearing the secondary infection role",FALSE,,,,,,,,,,,,,,If a secondary staphylococcus infection was identified during or after treatment of the primary infection.,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100095,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,secondary staph infection,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A infection caused by staphylococcus bacteria, bearing the secondary infection role",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001445,purpose of sequencing,purpose_of_sequencing|purpose of sequencing,A data field which describes the reason that the sample was sequenced.,FALSE,,,,,,,PCDS:purpose_of_sequencing,,,,,,,"PCDS: Provide the reason for sequencing by selecting a value from the following pick list: Diagnostic testing, Surveillance, Monitoring, Clinical trial, Field experiment, Environmental testing. If the information is unknown or cannot be provided, leave blank or provide a null value.",,,,,,,,,,,,,,PCDS: Research,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,purpose_of_sequencing|purpose of sequencing,purpose of sequencing slot,,,,GENEPIO:0001445,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,purpose of sequencing,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the reason that the sample was sequenced.,,PCDS: The reason that the sample was sequenced.,,,,,,
http://purl.obolibrary.org/obo/OBI_0002789,medical mask,,A face mask manufactured according to a recognized medical equipment standard.,FALSE,,,,,,,surgical mask,,,,,,,,,,,,,,https://www.canada.ca/en/public-health/services/diseases/2019-novel-coronavirus-infection/prevention-risks/about-non-medical-masks-face-coverings.html,,,,,medical mask,,"The finding of a much higher rate of infection in the cloth mask arm could be interpreted as harm caused by cloth masks, efficacy of medical masks, or most likely a combination of both.",,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0002789,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,medical mask,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788,,,https://github.com/obi-ontology/obi/issues/1193,A face mask manufactured according to a recognized medical equipment standard.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001892,entity history record,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001892,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,entity history record,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490300,laminated aluminum combination with paper,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0300,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490300,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,laminated aluminum combination with paper,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/PATO_0001536,solubility,,A molecular quality that inheres in a molecular entity by virtue of the bearer's disposition to dissolve in a liquid.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PATO:0001536,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/pato.owl,http://purl.oboInOwllibrary.org/oboInOwl/pato#scalar_slim|http://purl.oboInOwllibrary.org/oboInOwl/pato#relational_slim|http://purl.oboInOwllibrary.org/oboInOwl/pato#disposition_slim|http://purl.oboInOwllibrary.org/oboInOwl/pato#attribute_slim,,,,,,,,solubility,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A molecular quality that inheres in a molecular entity by virtue of the bearer's disposition to dissolve in a liquid.,,,,,,,,
http://purl.obolibrary.org/obo/PATO_0001537,soluble in,soluble,A solubility quality inhering in a substance by virtue of the bearer's disposition to dissolve in a liquid.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,soluble,,,,PATO:0001537,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/pato.owl,http://purl.oboInOwllibrary.org/oboInOwl/pato#value_slim|http://purl.oboInOwllibrary.org/oboInOwl/pato#relational_slim|http://purl.oboInOwllibrary.org/oboInOwl/pato#disposition_slim,,,,,,,,soluble in,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A solubility quality inhering in a substance by virtue of the bearer's disposition to dissolve in a liquid.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100195,community service centre exposure process,,A process occuring within or in the vicinity of a community service centre that exposes the recipient organism to a material entity.,FALSE,,,,,,,Community Service Centre,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100195,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,community service centre exposure process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A process occuring within or in the vicinity of a community service centre that exposes the recipient organism to a material entity.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C46109,Male Gender,Male Gender|Male,"The cultural, social, psychological, and behavior norms that are associated with being a man.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Male Gender|Male,,,,NCIT:C46109,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Male Gender,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The cultural, social, psychological, and behavior norms that are associated with being a man.",,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00002191,animal litter,straw bedding,Straw or other material strewn in an animal's enclosure (e.g. a stable) for it to sleep on and to absorb its faeces and urine.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,straw bedding,,,ENVO:00002191,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,animal litter,,,,,,,,,,,,,,,,,,,,,,http://opendata.inra.fr/EOL/EOL_0001601#bedding,,,,,,,,,,Straw or other material strewn in an animal's enclosure (e.g. a stable) for it to sleep on and to absorb its faeces and urine.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038651,superior mediastinal lymph node,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:276903,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0038651,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,superior mediastinal lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001463,consensus sequence software name,consensus sequence software name,A data field which describes the name of the software used to generate the consensus sequence.,FALSE,,,,,,,PCDS:consensus_sequence_software_name,,,,,,,PCDS: Provide the name of the software used to generate the consensus sequence.,,,,,,,,,,,,,,PCDS: iVar,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,consensus sequence software name,consensus sequence software name slot,,,,GENEPIO:0001463,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,consensus sequence software name,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the name of the software used to generate the consensus sequence.,,PCDS: The name of software used to generate the consensus sequence.,,,,,,
http://purl.obolibrary.org/obo/CHEBI_87113,antibiotic antifungal drug,,Any antibiotic antifungal agent used to treat fungal infections in humans or animals.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:87113,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,antibiotic antifungal drug,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any antibiotic antifungal agent used to treat fungal infections in humans or animals.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_487869,clavulanate,,The conjugate base of clavulanic acid.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:487869,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,clavulanate,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The conjugate base of clavulanic acid.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03316681,fish fillet (quick-frozen in blocks),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://bioregistry.io/reference/siren:F16681,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03316681,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,fish fillet (quick-frozen in blocks),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_62764,reactive nitrogen species,,A family of nitrogen molecular entities which are highly reactive and derived from nitric oxide (•NO) and superoxide (O<small><sub>2</sub></small>•<small><sup>−</small></sup>) produced via the enzymatic activity of inducible nitric oxide synthase 2 (NOS2) and NADPH oxidase respectively.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:62764,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,reactive nitrogen species,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A family of nitrogen molecular entities which are highly reactive and derived from nitric oxide (•NO) and superoxide (O<small><sub>2</sub></small>•<small><sup>−</small></sup>) produced via the enzymatic activity of inducible nitric oxide synthase 2 (NOS2) and NADPH oxidase respectively.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C199000,Person by Living Situation,Person by Living Situation,A person described by the circumstances in which they are currently living.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Person by Living Situation,,,,NCIT:C199000,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Person by Living Situation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A person described by the circumstances in which they are currently living.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C199001,Person by Health Status,Person by Health Status,A person described by a medical or psychological condition.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Person by Health Status,,,,NCIT:C199001,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Person by Health Status,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A person described by a medical or psychological condition.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_13778,chancroid,,"A primary bacterial infectious disease that is a sexually transmitted infection located in skin of the genitals, has_material_basis_in Haemophilus ducreyi, which is transmitted by sexual contact. The infection has symptom painful and soft ulcers.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:13778,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,chancroid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A primary bacterial infectious disease that is a sexually transmitted infection located in skin of the genitals, has_material_basis_in Haemophilus ducreyi, which is transmitted by sexual contact. The infection has symptom painful and soft ulcers.",,,,,,,,
http://purl.obolibrary.org/obo/CIDO_0000027,COVID-19 diagnostic process by viral genome sequencing,,A COVID-19 diagnostic process by viral genome sequencing and identification of the SARS-CoV-2 based on the genome sequence.,FALSE,,,,,,,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/pubmed/32245835,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CIDO:0000027,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/cido.owl,,,,,,,,,COVID-19 diagnostic process by viral genome sequencing,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Oliver He, Asiyah Yu Lin, Hong Yu",,,,A COVID-19 diagnostic process by viral genome sequencing and identification of the SARS-CoV-2 based on the genome sequence.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0004385,Protracted diarrhea,Protracted diarrhoea,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0473133|SNOMEDCT_US:236077008,,,,,,,,,,,,,,,,,,,,,,,,,Protracted diarrhoea,,,,HP:0004385,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Protracted diarrhea,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HP_0004386,Gastrointestinal inflammation,Gastrointestinal inflammation|GI inflammation,Inflammation of the alimentary part of the gastrointestinal system.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C1535950,,,,,,,,,,,,,,,,,,,,,,,,,Gastrointestinal inflammation|GI inflammation,,,,HP:0004386,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Gastrointestinal inflammation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Inflammation of the alimentary part of the gastrointestinal system.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C38186,Clinical or Research Facility,Clinical or Research Facility,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Clinical or Research Facility,,,,NCIT:C38186,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Clinical or Research Facility,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530025,fore shank,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0025,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530025,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,fore shank,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_936,brain disease,,A central nervous system disease that is located_in the brain.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:936,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,brain disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A central nervous system disease that is located_in the brain.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_934,viral infectious disease,,"A disease by infectious agent that results in infection, has_material_basis_in Viruses.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:934,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,viral infectious disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A disease by infectious agent that results in infection, has_material_basis_in Viruses.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_3547,cephradine,,"A first-generation cephalosporin antibiotic with a methyl substituent at position 3, and a (2<i>R</i>)-2-amino-2-cyclohexa-1,4-dien-1-ylacetamido substituent at position 7, of the cephem skeleton.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:3547,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,cephradine,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A first-generation cephalosporin antibiotic with a methyl substituent at position 3, and a (2<i>R</i>)-2-amino-2-cyclohexa-1,4-dien-1-ylacetamido substituent at position 7, of the cephem skeleton.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_53665,oxazinoquinoline,,Any organic heterotricyclic compound based on a skeleton comprised of an oxazine ring fused onto a quinoline system.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:53665,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,oxazinoquinoline,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any organic heterotricyclic compound based on a skeleton comprised of an oxazine ring fused onto a quinoline system.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C90351,Accidental Death,Accidental Death|ACCIDENTAL DEATH,An indication that the subject's death was due to a mishap.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Accidental Death|ACCIDENTAL DEATH,,,,NCIT:C90351,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Accidental Death,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An indication that the subject's death was due to a mishap.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0001931,scalar value specification,,A value specification that consists of two parts: a numeral and a unit label,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,scalar value specification,,,,,http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0001931,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,scalar value specification,,,,,,,,,,,,,,,,,,,,,,,,,,,,PERSON:Bjoern Peters,,,,A value specification that consists of two parts: a numeral and a unit label,,,,scalar,,,,
http://purl.obolibrary.org/obo/GAZ_00002459,United States of America,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,INSDC:country:usa,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00002459,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,United States of America,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C48187,Material,Material,The tangible substance that goes into the makeup of a physical object.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Material,,,,NCIT:C48187,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Material,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The tangible substance that goes into the makeup of a physical object.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510255,teenager as food consumer,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0255,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510255,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,teenager as food consumer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0000925,infectious agent,,is a material entity bearing the disposition to infect an organism,FALSE,,,,,,,,,,,,,,Note: testing use of 'transmitted by' relation; issue to be resolved is whether appropriate domain and range are involved.  This use would place 'transmitted by' as a subclass of 'participates in',,,,,,,IEDB,,,,,infectious agent,,,,,http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0000925,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,infectious agent,,,,,,,,,,,,,,,,,,,,,,,,,,,,IEDB,,,,is a material entity bearing the disposition to infect an organism,http://purl.obolibrary.org/obo/TRANS_0000000,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0006003,integumentary adnexa,body hair or bristle,"Anatomical structure embedded in or located in the integument that is part of the integumental system. Examples: hair, follicles, skin glands, claws, nails, feathers.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Skin_appendage|EMAPA:37883,,,,,,,,,,,,,,,,,,,,,,,,,,body hair or bristle,,,UBERON:0006003,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,integumentary adnexa,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Anatomical structure embedded in or located in the integument that is part of the integumental system. Examples: hair, follicles, skin glands, claws, nails, feathers.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001041,organism location history datum,,A time measurement datum that pertains to an organism's physical location.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001041,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,organism location history datum,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A time measurement datum that pertains to an organism's physical location.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000536,factory,manufacturing plant|manufactory,"A factory (previously manufactory) or manufacturing plant is an industrial site, usually consisting of buildings and machinery, or more commonly a complex having several buildings, where workers manufacture goods or operate machines processing one product into another.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,manufacturing plant|manufactory,,,,ENVO:01000536,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,factory,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A factory (previously manufactory) or manufacturing plant is an industrial site, usually consisting of buildings and machinery, or more commonly a complex having several buildings, where workers manufacture goods or operate machines processing one product into another.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C2902,Coagulation Disorder,"Coagulopathy, specify|Coagulopathy|Coagulation defect, unspecified|Coagulation Disorder|Coagulation Defect",A condition in which there is a deviation from or interruption of the normal coagulation properties of the blood.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Coagulopathy, specify|Coagulopathy|Coagulation defect, unspecified|Coagulation Disorder|Coagulation Defect",,,,NCIT:C2902,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Coagulation Disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A condition in which there is a deviation from or interruption of the normal coagulation properties of the blood.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020208,"piece of chicken meat (skinless, raw)",,A raw piece of skinless chicken meat.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020208,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"piece of chicken meat (skinless, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw piece of skinless chicken meat.,,,,,,,,
http://purl.obolibrary.org/obo/PCO_0000001,PCO_0000001,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PCO:0000001,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0006866,terminal part of digestive tract,rectum,"The distalmost portion of the digestive tract, derived from the hindgut, and terminating with the anus.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WBbt:0005773|FBbt:00005756,,,,,,,,,,,,,,,,,,,,,,,,,,rectum,,,UBERON:0006866,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,terminal part of digestive tract,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The distalmost portion of the digestive tract, derived from the hindgut, and terminating with the anus.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100827,number of total reads,number of total reads,A data field which describes the total number of non-unique reads generated by the sequencing process.,FALSE,,,,,,,PCDS:number_of_total_reads,,,,,,,PCDS: Provide a numerical value (no need to include units).,,,,,,,,,,,,,,PCDS: 423867,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,number of total reads,number of total reads slot,,,,GENEPIO:0100827,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,number of total reads,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the total number of non-unique reads generated by the sequencing process.,,PCDS: The total number of non-unique reads generated by the sequencing process.,,,,,,
http://purl.obolibrary.org/obo/UO_1000264,siemens based unit,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:1000264,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,siemens based unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510060,high energy food claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0060,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510060,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,high energy food claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001652,draft IRIDA epidemiological case model,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001652,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,draft IRIDA epidemiological case model,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/BTO_0002750,Calu-3 cell,,Human lung adenocarcinoma cell line; established from a 25-year-old caucasian male.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,BTO:0002750,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/bto.owl,,,,,,,,,Calu-3 cell,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Human lung adenocarcinoma cell line; established from a 25-year-old caucasian male.,,,,,,,,
http://purl.obolibrary.org/obo/PECO_0007286,dry season exposure,dry season treatment (narrow),The treatment involving an exposure to the dry season.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,EO:0007286,,,dry season treatment (narrow),,,PECO:0007286,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/peco.owl,,,,,,,,,dry season exposure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The treatment involving an exposure to the dry season.,,,,,,,,
http://purl.obolibrary.org/obo/PECO_0007285,rainy season exposure,rainy season treatment (narrow),The treatment involving an exposure to the wet or the rainy season.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,EO:0007285|EO:0007032,,,rainy season treatment (narrow),,,PECO:0007285,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/peco.owl,,,,,,,,,rainy season exposure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The treatment involving an exposure to the wet or the rainy season.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03460273,zinc added claim,,A claim that a zinc has been added to an edible product.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=H0273,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03460273,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,zinc added claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A claim that a zinc has been added to an edible product.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000297,paddy field,,A flooded parcel of arable land used for growing rice and other semiaquatic crops.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Paddy_field,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00000297,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,paddy field,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A flooded parcel of arable land used for growing rice and other semiaquatic crops.,,,,,,,,
http://purl.obolibrary.org/obo/OGMS_0000063,disease course,,The totality of all processes through which a given disease instance is realized.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OGMS:0000063,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ido.owl,,,,,,,,,disease course,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The totality of all processes through which a given disease instance is realized.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_4454,Destomysin,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:4454,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,Destomysin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002465,E. coli O antigen specification,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002465,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,E. coli O antigen specification,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0001076,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001287,symptom record,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001287,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,symptom record,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,"order:
HP:0000118          # symptom
FLU:0000976         # onset
GENEPIO:0001789 # cessation
GENEPIO:0001784 # duration",,,,,
http://purl.obolibrary.org/obo/OBI_0002751,Oxford Nanopore GridION Mk1,,"A DNA sequencer that is manufactured by the Oxford Nanopore Technologies corporation, that can run and analyze up to five individual flow cells producing up to 150 Gb of data per run. The sequencer produces real-time results and utilizes nanopore technology with the option of running the flow cells concurrently or individually.",FALSE,,,,,,,"Oxford Nanopore GridION X5, GridION Mk1",,,,,,,,,,,,,,https://nanoporetech.com/products/gridion,,,,,Oxford Nanopore GridION Mk1,,Nineteen libraries were constructed and sequenced on nineteen different R9.4 FlowCells using the GridION X5 sequencer,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0002751,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Oxford Nanopore GridION Mk1,,,,,,,,,,,,,,,,,,,,,,,,,,,,PERSON: Bonita Lam,,,,"A DNA sequencer that is manufactured by the Oxford Nanopore Technologies corporation, that can run and analyze up to five individual flow cells producing up to 150 Gb of data per run. The sequencer produces real-time results and utilizes nanopore technology with the option of running the flow cells concurrently or individually.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490361,nylon 11 container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0361,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490361,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,nylon 11 container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000357,veal rib roast (raw),,A raw veal rib roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000357,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,veal rib roast (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw veal rib roast.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100471,sequenced by contact name,sequenced_by_contact_name|sequenced by contact name,A data field which describes the name or title of the contact responsible for follow-up regarding the sequence.,FALSE,,,,,,,PCDS:sequenced_by_contact_name,,,,,,,"PCDS: Provide the name of an individual or their job title. As personnel turnover may render the contact's name obsolete, it is more prefereable to provide a job title for ensuring accuracy of information and institutional memory. If the information is unknown or cannot be provided, leave blank or provide a null value.",,,,,,,,,,,Not to be confused with 'sequence submitted by contact name' http://purl.obolibrary.org/obo/GENEPIO_0100474,,,PCDS: Joe Harrison,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,sequenced_by_contact_name|sequenced by contact name,sequenced by contact name slot,,,,GENEPIO:0100471,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,sequenced by contact name,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the name or title of the contact responsible for follow-up regarding the sequence.,,PCDS: The name or title of the contact responsible for follow-up regarding the sequence.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100806,salinity measurement unit,salinity measurement unit,An environmental data field which describes the units of a measurement of salinity.,FALSE,,,,,,,PCDS:salinity_measurement_unit,,,,,,,PCDS: Provide the units of the measured salinity.,,,,,,,,,,,,,,PCDS: practical salinity unit (PSU),,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,salinity measurement unit,salinity measurement unit slot,,,,GENEPIO:0100806,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,salinity measurement unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the units of a measurement of salinity.,,PCDS: The units of a measurement of salinity.,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510150,(percent) fat free claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0150,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510150,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,(percent) fat free claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_59777,ketal,,"An acetal of formula R<small><sub>2</sub></small>C(OR)<small><sub>2</sub></small> (R ≠ H) derived from a ketone by replacement of the oxo group by two hydrocarbyloxy groups. The class name 'ketals', once abandoned by IUPAC, has been reinstated as a subclass of acetals.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:59777,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,ketal,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An acetal of formula R<small><sub>2</sub></small>C(OR)<small><sub>2</sub></small> (R ≠ H) derived from a ketone by replacement of the oxo group by two hydrocarbyloxy groups. The class name 'ketals', once abandoned by IUPAC, has been reinstated as a subclass of acetals.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_26191,polyol,,A compound that contains two or more hydroxy groups.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:26191,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,polyol,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A compound that contains two or more hydroxy groups.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0456,Cocos Islander,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0456,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Cocos Islander,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0459,Northern Mariana Islander,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0459,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Northern Mariana Islander,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0450,Tunisian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0450,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Tunisian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0451,Turkish,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0451,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Turkish,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0453,Yemeni,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0453,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Yemeni,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0454,Aruban,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0454,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Aruban,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0455,Christmas Islander,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0455,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Christmas Islander,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0457,Curacaoan,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0457,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Curacaoan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0452,Emirati,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0452,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Emirati,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0458,Kosovar,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0458,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Kosovar,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ECTO_0600000,exposure to environmental system,environmental system exposure,A exposure event involving the interaction of an exposure receptor to environmental system.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,environmental system exposure,,,,ECTO:0600000,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ecto.owl,,,,,,,,,exposure to environmental system,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A exposure event involving the interaction of an exposure receptor to environmental system.,,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000064,sequence read count,,sequence read count is a data item determining how many sequence reads have been generated by a DNA sequencing assay for a given stretch of DNA,FALSE,,,,,,,,,,,,,,,,,,,,,"AGB-PRS, STATO",,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000064,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,sequence read count,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra|Orlaith Burke|Alejandra Gonzalez-Beltran,,,,sequence read count is a data item determining how many sequence reads have been generated by a DNA sequencing assay for a given stretch of DNA,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001615,host profile or identifers,,"The host profile or identifiers text is the ""identification or description of the specific individual from which this sample was obtained"".",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI BioSample: isolate,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001615,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,host profile or identifers,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,NCBI BioSample,,"The host profile or identifiers text is the ""identification or description of the specific individual from which this sample was obtained"".",,,,,,,,
http://purl.obolibrary.org/obo/NCRO_0000230,antibiotic treatment,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCRO:0000230,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,antibiotic treatment,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100623,amplicon pcr primer list,,PCDS: Select the primers used to generate the ribosomal 16S or 23S amplicon for sequencing from the pick list.,FALSE,,,,,,,PCDS:amplicon_pcr_primer_list,,,,,,,PCDS: Select the primers used to generate the ribosomal 16S or 23S amplicon for sequencing from the pick list.,,,,,,,,,,,,,,PCDS: 27F;1492R,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100623,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,amplicon pcr primer list,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PCDS: An information content entity specifying a list of primers used for amplicon sequencing.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002143,floating point value specification,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002143,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,floating point value specification,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510115,other ingredient- or constituent-related claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0115,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510115,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,other ingredient- or constituent-related claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000103,beef chuck roast,,A beef roast that comes from the center portion of the Chuck Roll.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000103,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef chuck roast,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A beef roast that comes from the center portion of the Chuck Roll.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C42579,Unit of Mass,Unit of Mass,An indication of the type of unit of measure being used to express a mass.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Unit of Mass,,,,NCIT:C42579,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Unit of Mass,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An indication of the type of unit of measure being used to express a mass.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100613,input protein sequence length measurement datum,,A sequence length measurement datum which describes the number of positions of a protein undergoing analysis.,FALSE,,,,,,,input protein length,,,,,,,,,,,,,,Emma Griffiths,,,,,input protein sequence length measurement datum,,638bp,,,,http://purl.obolibrary.org/obo/OBI_0002892,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100613,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,input protein sequence length measurement datum,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-1107-9135,,,https://github.com/obi-ontology/obi/issues/1579,A sequence length measurement datum which describes the number of positions of a protein undergoing analysis.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_10371,yaws,,"A primary bacterial infectious disease that results in infection located in skin, located in joint or located in bone, has_material_basis_in Treponema pallidum subsp pertenue, which is transmitted by direct skin contact with an infected person. The infection has symptom skin lesions.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:10371,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,yaws,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A primary bacterial infectious disease that results in infection located in skin, located in joint or located in bone, has_material_basis_in Treponema pallidum subsp pertenue, which is transmitted by direct skin contact with an infected person. The infection has symptom skin lesions.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000281,pork belly,,A boneless and fatty cut from the belly of a pig.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000281,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pork belly,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A boneless and fatty cut from the belly of a pig.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_331,central nervous system disease,,A nervous system disease that affects either the spinal cord (myelopathy) or brain (encephalopathy) of the central nervous system.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:331,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,central nervous system disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A nervous system disease that affects either the spinal cord (myelopathy) or brain (encephalopathy) of the central nervous system.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0000912,mucus,,Mucus is a bodily fluid consisting of a slippery secretion of the lining of the mucous membranes in the body. It is a viscous colloid containing antiseptic enzymes (such as lysozyme) and immunoglobulins. Mucus is produced by goblet cells in the mucous membranes that cover the surfaces of the membranes. It is made up of mucins and inorganic salts suspended in water.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:Mucus|Wikipedia:Mucus|UMLS:C0026727|NCIT:C13259|MESH:D009093|GAID:1164|FMA:66938|ENVO:02000040|CALOHA:TS-2144,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0000912,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,mucus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Mucus is a bodily fluid consisting of a slippery secretion of the lining of the mucous membranes in the body. It is a viscous colloid containing antiseptic enzymes (such as lysozyme) and immunoglobulins. Mucus is produced by goblet cells in the mucous membranes that cover the surfaces of the membranes. It is made up of mucins and inorganic salts suspended in water.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001211,anatomical material,anatomical_material|anatomical material,A data field which describes the substance obtained from an anatomical part of an organism.,FALSE,,,,,,,PCDS:anatomical_material,,,,,,,"PCDS: An anatomical material is a substance taken from the body. If applicable, select the standardized term and ontology ID for the anatomical material from the picklist provided. Multiple values can be provided, separated by a semi-colon.",,,,,,,,,,,,,,PCDS: Tissue [UBERON:0000479]; Blood [UBERON:0000178],,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,anatomical_material|anatomical material,anatomical material slot,,,,GENEPIO:0001211,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,anatomical material,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the substance obtained from an anatomical part of an organism.,,PCDS: A substance obtained from an anatomical part of an organism.,,,,,,
http://purl.obolibrary.org/obo/HP_0006528,Chronic lung disease,Chronic lung disease,"According to the definitions of the American and British Thoracic Societies, including pulmonary functional tests, X-rays, and CT scans for items such as fibrosis, bronchiectasis, bullae, emphysema, nodular or lymphomatous abnormalities.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0746102|SNOMEDCT_US:413839001,,,,,,,,,,,,,,,,,,,,,,,,,Chronic lung disease,,,,HP:0006528,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Chronic lung disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"According to the definitions of the American and British Thoracic Societies, including pulmonary functional tests, X-rays, and CT scans for items such as fibrosis, bronchiectasis, bullae, emphysema, nodular or lymphomatous abnormalities.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100714,microbiological characterization data tag,microbiological characterization data type|microbiological characterization attribute bundle,A dataset attribute bundle which indicates the presence of microbiological characterization data.,FALSE,,,,,,,microbiological characterization,,,,,,,Example Guidance: Use this tag to indicate additional data is available that provides characterization information based on microbiological properties.,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,microbiological characterization data type|microbiological characterization attribute bundle,,,,GENEPIO:0100714,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-05-18T19:08:34.869Z,,,,,,,,,,,,,,,,,,,microbiological characterization data tag,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A dataset attribute bundle which indicates the presence of microbiological characterization data.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0000718,pathogen role,,pathogen role is a role which inheres in an organism and realized in the process of disease course in the organism bearing host role caused by the organism bearing pathogen role,FALSE,,,,,,,,,,,,,,,,,,,,6 April 2009:  from the Vaccine Community,OBI,,,,,pathogen role,,"Pathogen: An agent of disease. A disease producer. The term pathogen most commonly is used to refer to infectious organisms. These include bacteria (such as staph), viruses (such as HIV), and fungi (such as yeast). Less commonly, pathogen refers to a noninfectious agent of disease such as a chemical.   http://www.medterms.com/script/main/art.asp?articlekey=6383",,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0000718,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,pathogen role,,,,,,,,,,,,,,,,,,,,,,,,,,,,GROUP: Role Branch,,,,pathogen role is a role which inheres in an organism and realized in the process of disease course in the organism bearing host role caused by the organism bearing pathogen role,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490377,polystyrene container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0377,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490377,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,polystyrene container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0700096,human disease,human disease or disorder,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,human disease or disorder,,,,MONDO:0700096,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#rare_grouping,,,,,,,,human disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000198,beef shank (raw),,A raw beef shank.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000198,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef shank (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef shank.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03305734,fish fillet (raw),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://bioregistry.io/reference/siren:F5734,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03305734,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,fish fillet (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UO_1000123,radian based unit,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:1000123,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,radian based unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000099,beef blade chuck steak,,A steak cut from the flat bone portion of the blade that comes from ribs 4 through 5.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000099,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef blade chuck steak,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A steak cut from the flat bone portion of the blade that comes from ribs 4 through 5.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0101078,AMR reference database name,AMR reference database name,A data field which describes the name of the reference database used to perform an in silico antimicrobial resistance determinant identification or analysis.,FALSE,,,,,,,PCDS:amr_reference_database_name,,,,,,,PCDS: Provide the name of the reference database used for AMR analysis.,,,,,,,,,,,,,,PCDS: Comprehensive Antibiotic Resistance Database (CARD),,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,AMR reference database name,AMR reference database name slot,,,,GENEPIO:0101078,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,AMR reference database name,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the name of the reference database used to perform an in silico antimicrobial resistance determinant identification or analysis.,,PCDS: The name of the reference database used to perform an in silico antimicrobial resistance determinant identification/analysis.,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000364,veal sirloin,,A veal primal cut that is contained within the larger primal cut 'veal loin'. It is located between the short loin and the leg (round) and includes the hip section and ends at the socket of the pelvis.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000364,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,veal sirloin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A veal primal cut that is contained within the larger primal cut 'veal loin'. It is located between the short loin and the leg (round) and includes the hip section and ends at the socket of the pelvis.,,,,,,,,
http://purl.obolibrary.org/obo/IAO_0000031,integer numeral,,A numeral that denotes an integer,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,integer numeral,,,,,http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,IAO:0000031,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/iao.owl,,,,,,,,,integer numeral,,,,,,,,,,,,,,,,,,,,,,,,,,,,PERSON: Jonathan Rees,,,,A numeral that denotes an integer,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001867,radial coordinate system,,A coordinate system composed of a radius from the origin of one dimension combined with angular offsets from the origins of the remaining dimensions.,FALSE,,,,,,,,,,,,,,A coordinate system composed of a radius from the origin of one dimension combined with angular offsets from the origins of the remaining dimensions.,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/PATO_0002390|http://purl.obolibrary.org/obo/GENEPIO_0001868,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001867,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,radial coordinate system,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001555,sexual contact exposure,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001555,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,sexual contact exposure,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038920,buccinator lymph node,nodus lymphoideus buccinatorius|nodus buccinatorius|buccinator node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:61223,,,,,,,,,,,,,,,,,,,,,,,,,nodus lymphoideus buccinatorius|nodus buccinatorius|buccinator node,,,,UBERON:0038920,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,buccinator lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038922,nasolabial lymph node,nodus nasolabialis|nodus lymphoideus nasolabialis|nasolabial node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:61225,,,,,,,,,,,,,,,,,,,,,,,,,nodus nasolabialis|nodus lymphoideus nasolabialis|nasolabial node,,,,UBERON:0038922,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,nasolabial lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038929,infrahyoid lymph node,infrahyoid node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:61233,,,,,,,,,,,,,,,,,,,,,,,,,infrahyoid node,,,,UBERON:0038929,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,infrahyoid lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038923,malar lymph node,nodus malaris|nodus lymphoideus malaris|malar node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:61226,,,,,,,,,,,,,,,,,,,,,,,,,nodus malaris|nodus lymphoideus malaris|malar node,,,,UBERON:0038923,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,malar lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038925,lingual lymph node,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:61228,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0038925,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,lingual lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_59063,polymyxin B2,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:59063,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,polymyxin B2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/OBA_2001033,age of onset of coronary atherosclerosis,age coronary atherosclerosis symptoms begin|age at onset of coronary atherosclerosis,The age at which coronary atherosclerosis manifestations first appear.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,age coronary atherosclerosis symptoms begin|age at onset of coronary atherosclerosis,,,,OBA:2001033,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age of onset of coronary atherosclerosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The age at which coronary atherosclerosis manifestations first appear.,,,,,,,,
http://purl.obolibrary.org/obo/PATO_0070000,sequential hermaphrodite,sequential hermaphroditic,A hermaphroditic quality that inheres in a population or organism where an organism changes is a different sexes during different life stages.,FALSE,,,,,,,,,,,,,,Sequential hermaphrodity is generally characterized by an organism producing female gametes and male gametes during different life stages.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,sequential hermaphroditic,,,,PATO:0070000,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/pato.owl,,,,,,,,,sequential hermaphrodite,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A hermaphroditic quality that inheres in a population or organism where an organism changes is a different sexes during different life stages.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C62263,diversity,,"Variety; quality, state, fact, or instance of being different.|The degree of differences in identifying features among the members of a purposefully defined group.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://www.wikidata.org/wiki/Q1230584|https://en.wikipedia.org/wiki/Diversity_(politics),,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCIT:C62263,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gsso.owl,,,,,,,,,diversity|diversitet,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Variety; quality, state, fact, or instance of being different.|The degree of differences in identifying features among the members of a purposefully defined group.",,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000043,wetland area,,An vegetated area which overlaps a wetland ecosystem.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00000043,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,wetland area,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An vegetated area which overlaps a wetland ecosystem.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000752,area of barren land,,"An area of a planet's surface which is primarily composed of bedrock, desert pavement, scarp rock, talus, material exposed by slides, volcanic material, glacial debris, sand, material exposed during strip mining, gravel, and other accumulations of earthen material in contact with an atmospheric column extending from the planetary boundary layer to the planet's exosphere with little to no physical obstruction.",FALSE,,,,,,,Barren Land (Rock/Sand/Clay),,,,,,,"According to the NLCD 2011, areas of barren land generally have less than 15% cover of vegetation. A specific threshold is not asserted in this definition.",,,,,,,,,,,,,,,,,,NLCD:31,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01000752,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,nlcd2011|envoPolar,,,,,,,,area of barren land,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An area of a planet's surface which is primarily composed of bedrock, desert pavement, scarp rock, talus, material exposed by slides, volcanic material, glacial debris, sand, material exposed during strip mining, gravel, and other accumulations of earthen material in contact with an atmospheric column extending from the planetary boundary layer to the planet's exosphere with little to no physical obstruction.",,,,,,,,
http://purl.obolibrary.org/obo/BTO_0000836,MDBK cell,,"The MDBK cell line was derived from a kidney of an apparently normal adult steer, February 18, 1957, by S.H. Madin and N.B. Darby.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,BTO:0000836,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/bto.owl,,,,,,,,,MDBK cell,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The MDBK cell line was derived from a kidney of an apparently normal adult steer, February 18, 1957, by S.H. Madin and N.B. Darby.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510092,starch-related claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0092,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510092,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,starch-related claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0004511,stomach content,,"Undigested food material, microbiota, and other materials found in the stomach.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0004511,,,,,,,,,,,,,https://orcid.org/0000-0001-5275-8866,2023-11-28T14:17:24Z,,,,,,,,,,,,,,,,,,,stomach content,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Undigested food material, microbiota, and other materials found in the stomach.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02021038,buffalo chop,,"A retail cut of meat from a buffalo that is perpendicular to the spine, and usually containing a rib or riblet part of a vertebra.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02021038,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,buffalo chop,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A retail cut of meat from a buffalo that is perpendicular to the spine, and usually containing a rib or riblet part of a vertebra.",,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00005121,"populated place, Zimbabwe",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00005121,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Zimbabwe",http://purl.obolibrary.org/obo/GAZ_00001106,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00003302,beef tenderloin,,"A cut of beef corresponding to the psoas major muscle, which is very tender.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00003302,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef tenderloin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A cut of beef corresponding to the psoas major muscle, which is very tender.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100256,first responder role,,A role inhering in a person that is realized when the bearer is among the first to arrive at the scene of an emergency and has specialized training to provide assistance.,FALSE,,,,,,,First Responder,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/First_responder,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100256,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,first responder role,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A role inhering in a person that is realized when the bearer is among the first to arrive at the scene of an emergency and has specialized training to provide assistance.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000076,read length,,A datum of the number of base pairs per read.,FALSE,,,,,,,,,,,,,,,,,,,,,GROUP: IRIDA Ontology (Emma),,,,,,,"151, 251",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000076,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,,,,,,,read length,,,,,Sequencing,,,,,,,,,,,,,,,,,,,,,,Read Length,,,Derived from Illumina Sample Sheet,,A datum of the number of base pairs per read.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0004756,Ventricular tachycardia,,A tachycardia originating in the ventricles characterized by rapid heart rate (over 100 beats per minute) and broad QRS complexes (over 120 ms).,FALSE,,,,,,,,,,,,,,"Ventricular tachycardia (VT) is a potentially life-threatening ventricular arrhythmia that presents as a wide QRS complex tachycardia, and is defined as three or more consecutive QRS complexes with a duration longer than 120 milliseconds (ms) and a rate of 100 beats per minute or more, whereby the complexes have a ventricular origin. VT can be subdivided as follows: (i) sustained VT persists for 30 seconds or more; (ii) non-sustained VT lasts less than 30 seconds; (iii) monomorphic VT displays a uniform QRS morphology; and (iv) polymorphic VT displays QRS morphologies that variy from beat to beat. VT is observed most commonly in individuals with structural heart disease or acute myocardial infarction (MI). VT may also be observed in in the setting of drug toxicity or electrolyte abnormalities or in individuals with Mendelian disease.",,,,,,,,,,,,,,,,,,UMLS:C0042514|SNOMEDCT_US:25569003|Fyler:7160,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0004756,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Ventricular tachycardia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A tachycardia originating in the ventricles characterized by rapid heart rate (over 100 beats per minute) and broad QRS complexes (over 120 ms).,,,,,,,,
http://purl.obolibrary.org/obo/GSSO_009468,gender modality,,"The correspondence (or lack thereof) between one's assigned gender at birth and one's actual gender and/or gender presentation. The two primary, and most well known gender modalities are cisgender and transgender. However those are not the only possible relations for one to have. Gender modality is an open-ended category which welcomes the elaboration of further terms.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://www.wikidata.org/wiki/Q106647285|https://nonbinary.wiki/wiki/Gender_modality|https://mogai-genders.fandom.com/wiki/Gender_Modality,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GSSO:009468,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gsso.owl,,,,,,,,,gender modality,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The correspondence (or lack thereof) between one's assigned gender at birth and one's actual gender and/or gender presentation. The two primary, and most well known gender modalities are cisgender and transgender. However those are not the only possible relations for one to have. Gender modality is an open-ended category which welcomes the elaboration of further terms.",,,,,,,,
http://purl.obolibrary.org/obo/OMRSE_00000058,student role,,"A human social role that, if realized, is realized by the process of formal education that the bearer undergoes.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OMRSE:00000058,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/omrse.owl,,,,,,,,,student role,,,,,,,,,,,,,,,,,,,,,,,,,,,,Mathias Brochhausen,,,,"A human social role that, if realized, is realized by the process of formal education that the bearer undergoes.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03500025,saran surface,,Trade name of polyvinylidene chloride copolymer film. Chief packaging uses are in film and in coatings for other flexible substrates such as cellophane and paper.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=N0025,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03500025,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,saran surface,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Trade name of polyvinylidene chloride copolymer film. Chief packaging uses are in film and in coatings for other flexible substrates such as cellophane and paper.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000249,lamb shoulder arm roast,,A roast that is derived from the arm portion of the Shoulder primal. Arm Roasts come from the shaft of the Humerus and includes the surrounding muscles that extends from the Elbow joint to the Shoulder joint.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000249,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lamb shoulder arm roast,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A roast that is derived from the arm portion of the Shoulder primal. Arm Roasts come from the shaft of the Humerus and includes the surrounding muscles that extends from the Elbow joint to the Shoulder joint.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100189,contact with person who recently travelled exposure process,,"A process occuring within or in the vicinity of a human, who recently travelled, that exposes the recipient organism to a material entity.",FALSE,,,,,,,Contact with Person who Recently Travelled,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100189,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,contact with person who recently travelled exposure process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A process occuring within or in the vicinity of a human, who recently travelled, that exposes the recipient organism to a material entity.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002151,unsigned short integer value specification,,A 16 bit integer ranging from 0 - 65535,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002151,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,unsigned short integer value specification,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A 16 bit integer ranging from 0 - 65535,,,,unsigned short,,,,
http://purl.obolibrary.org/obo/FOODON_00001040,chicken meat food product,,A food product that is derived from some chicken meat.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00001040,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,chicken meat food product,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A food product that is derived from some chicken meat.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002094,obsolete: specimen collection device,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,"Moved term to OBI, deprecated in favour of the OBI version.",,,,,,,,,,,,,,,,,,,GENEPIO:0002094,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: specimen collection device,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/OBI_0002814,,,,,,,,,,,
http://purl.obolibrary.org/obo/UO_1000208,gram per deciliter based unit,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:1000208,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,gram per deciliter based unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000292,pork loin blade roast,,A roast derived from the loin blade.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000292,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pork loin blade roast,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A roast derived from the loin blade.,,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000245,relative risk,,Relative risk is a measurement datum which denotes the risk of an 'event' relative to an 'exposure'. Relative risk is calculated by forming the ratio of the probability of the event occurring in the exposed group versus the probability of this event occurring in the non-exposed group.,FALSE,,,,,,,risk ratio,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000245,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,relative risk,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra|Orlaith Burke|Alejandra Gonzalez-Beltran,,,,Relative risk is a measurement datum which denotes the risk of an 'event' relative to an 'exposure'. Relative risk is calculated by forming the ratio of the probability of the event occurring in the exposed group versus the probability of this event occurring in the non-exposed group.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C3833,Asymptomatic,asymptomatic|NO SYMPTOMS|Asymptomatic,Without clinical signs or indications that raise the possibility of a particular disorder or dysfunction.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,asymptomatic|NO SYMPTOMS|Asymptomatic,,,,NCIT:C3833,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Asymptomatic,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Without clinical signs or indications that raise the possibility of a particular disorder or dysfunction.,,,,,,,,
http://purl.obolibrary.org/obo/MP_0002405,respiratory system inflammation,,"local accumulation of fluid, plasma proteins, and leukocytes in the respiratory system",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MP:0002405,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mp.owl,,,,,,,,,respiratory system inflammation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"local accumulation of fluid, plasma proteins, and leukocytes in the respiratory system",,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000933,residential building,,A human house which serves as a long-term shelter for its inhabitants and within which they store personal property.,FALSE,,,,,,,,,,,,,,"This term is not to be used for hotels, hostels, inns and the like, which provides shorter-term stays.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01000933,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,residential building,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A human house which serves as a long-term shelter for its inhabitants and within which they store personal property.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001401,preexisting conditions and risk factors,pre-existing conditions and risk factors,A data field which describes a medical condition that existed prior to the current infection (pre-existing condition) or a variable associated with an increased risk of disease or infection (risk factor).,FALSE,,,,,,,PCDS:preexisting_conditions_and_risk_factors,,,,,,,"PCDS: Select all of the pre-existing conditions and risk factors experienced by the host from the pick list. If the desired term is missing, contact the curation team.",,,,,,,,,,,,,,PCDS: Pregnancy,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,pre-existing conditions and risk factors,pre-existing conditions and risk factors slot,,,,GENEPIO:0001401,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,preexisting conditions and risk factors,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes a medical condition that existed prior to the current infection (pre-existing condition) or a variable associated with an increased risk of disease or infection (risk factor).,,PCDS: Patient pre-existing conditions and risk factors. Pre-existing condition: A medical condition that existed prior to the current infection. Risk Factor: A variable associated with an increased risk of disease or infection.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001273,obsolete: human exposure activity type,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,unnecessary distinction,,,,,,,,,,,,,,,,,,,GENEPIO:0001273,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: human exposure activity type,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,http://purl.obolibrary.org/obo/GENEPIO_0001275,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001094,country of birth,,A country of birth is the country that a given person (or animal) was born in.,FALSE,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/NCIT_C25155,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001094,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/NCIT_C25464,,,,,,country of birth,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A country of birth is the country that a given person (or animal) was born in.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000140,draft pathogenic epi case travel record,,"A record of a patient's recent travel - departure and return, mode of travel and locations visited - as it may pertain to an outbreak pathogen transmission event.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000140,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,draft pathogenic epi case travel record,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"A record of a patient's recent travel - departure and return, mode of travel and locations visited - as it may pertain to an outbreak pathogen transmission event.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0101013,turbidity measurement method,turbidity measurement method,An environmental data field which describes the method by which a measurement of turbidity was determined.,FALSE,,,,,,,PCDS:turbidity_measurement_method,,,,,,,PCDS: Provide the name of the procedure or technology used to measure turbidity.,,,,,,,,,,,,,,PCDS: Nephelometric method,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,turbidity measurement method,turbidity measurement method slot,,,,GENEPIO:0101013,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,turbidity measurement method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the method by which a measurement of turbidity was determined.,,PCDS: The process used to measure turbidity.,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510185,iodized claim,,A claim that iodine has been added to an edible product.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0185|http://www.langual.org/langual_thesaurus.asp?termid=H0189,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510185,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,iodized claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A claim that iodine has been added to an edible product.,,,,,,,,
http://purl.obolibrary.org/obo/PO_0025131,plant anatomical entity,,An anatomical entity that is or was part of a plant.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PO_GIT:224,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PO:0025131,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,plant anatomical entity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An anatomical entity that is or was part of a plant.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001882,created date,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001882,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,created date,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001850,datum status,,A data item which is about the collection state of a datum at some point in time.,FALSE,,,,,,,,,,,,,,"A given datum's datum status value is metadata, i.e. a statement about a particular datum, often when no actual data entry or categorical choice for that datum has been made.",,,,,,,,,,,"Damion Dooley note: We'll need to incorporate NIAID GSCID-BRC Sample data standards mention:
Unknown/Not Applicable/Censored Allowed
Unknown/not applicable/not available/ available upon request",,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001850,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,datum status,,,,,,,,,,,,,,,,,,,,,,"INSDC missing value reporting terms:
http://www.ebi.ac.uk/ena/about/missing-values-reporting",,,,,,Damion Dooley,,,,A data item which is about the collection state of a datum at some point in time.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001103,map project,,"Map: - project that results in non-sequence map data such as genetic map, radiation hybrid map, cytogenetic map, optical map, and etc.",FALSE,,,,,,,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/books/NBK54364/,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001103,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,map project,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"Map: - project that results in non-sequence map data such as genetic map, radiation hybrid map, cytogenetic map, optical map, and etc.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_8596,scarlet fever,,"An upper respiratory tract disease described as an acute contagious disease caused by Group A bacteria of the genus Streptococcus (especially various strains of S. pyogenes) and characterized by inflammation of the nose, throat, and mouth, generalized toxemia, and a red rash.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:8596,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,scarlet fever,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An upper respiratory tract disease described as an acute contagious disease caused by Group A bacteria of the genus Streptococcus (especially various strains of S. pyogenes) and characterized by inflammation of the nose, throat, and mouth, generalized toxemia, and a red rash.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0010239,spiral colon,coiled colon,A variant of the ascending colon in ruminants and pigs.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Spiral_colon|UMLS:C0227374|NCIT:C92438,,,,,,,,,,,,,,,,,,,,,,,,,coiled colon,,,,UBERON:0010239,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,spiral colon,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A variant of the ascending colon in ruminants and pigs.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0003668,synovial bursa,bursa,A small fluid-filled sac lined by synovial membrane with an inner capillary layer of slimy fluid. It provides a cushion between bones and tendons and/or muscles around a joint. This helps to reduce friction between the bones and allows free movement. Bursae are filled with synovial fluid and are found around most major joints of the body.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:Bursa|Wikipedia:Synovial_bursa|UMLS:C0006441|SCTID:182483003|NCIT:C33717|MESH:D002061|GAID:252|FMA:9692,,,,,,,,,,,,,,,,,,,,,,,,bursa,,,,,UBERON:0003668,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,synovial bursa,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A small fluid-filled sac lined by synovial membrane with an inner capillary layer of slimy fluid. It provides a cushion between bones and tendons and/or muscles around a joint. This helps to reduce friction between the bones and allows free movement. Bursae are filled with synovial fluid and are found around most major joints of the body.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510099,flavor- or taste-related claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0099,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510099,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,flavor- or taste-related claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038818,posterior ancreaticoduodenal lymph node,no. 13 pancreaticoduodenal lymph node|jPS 13 node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:304577,,,,,,,,,,,,,,,,,,,,,,,,,no. 13 pancreaticoduodenal lymph node|jPS 13 node,,,,UBERON:0038818,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,posterior ancreaticoduodenal lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_75246,rifaximin,,"A semisynthetic member of the class of rifamycins and non-systemic gastrointestinal site-specific broad spectrum antibiotic. Used in the treatment of traveller's diarrhoea, hepatic encephalopathy and irritable bowel syndrome.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:75246,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,rifaximin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A semisynthetic member of the class of rifamycins and non-systemic gastrointestinal site-specific broad spectrum antibiotic. Used in the treatment of traveller's diarrhoea, hepatic encephalopathy and irritable bowel syndrome.",,,,,,,,
http://purl.obolibrary.org/obo/UO_1000175,gram per liter based unit,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:1000175,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,gram per liter based unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UO_1000173,gram per milliliter based unit,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:1000173,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,gram per milliliter based unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0003114,Illumina MiniSeq,,"A small benchtop DNA sequencer which is manufactured by the Illumina corporation with integrated cluster generation, sequencing and data analysis. The sequencer accommodates various flow cell configurations and can produce up to 25M single reads or 50M paired-end reads per run.",FALSE,,,,,,,MiniSeq,,,,,,,,,,,,,,url:https://www.illumina.com/systems/sequencing-platforms/miniseq.html,,,,,Illumina MiniSeq,,Whole genome sequencing of Klebsiella pneumoniae ST11 was performed using an Illumina Miniseq Sequencing System. PMID:31493526,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0003114,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Illumina MiniSeq,,,,,,,,,,,,,,,,,,,,,,,,,,,,PERSON: Bonita Lam,,,,"A small benchtop DNA sequencer which is manufactured by the Illumina corporation with integrated cluster generation, sequencing and data analysis. The sequencer accommodates various flow cell configurations and can produce up to 25M single reads or 50M paired-end reads per run.",,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0021113,respiratory failure,chronic respiratory failure|acute respiratory failure,"The significant impairment of gas exchange within the lungs resulting in hypoxia, hypercarbia, or both, to the extent that organ tissue perfusion is severely compromised. Causes include chronic obstructive pulmonary disease, asthma, emphysema, acute respiratory distress syndrome, pneumonia, pulmonary edema, pneumothorax, and congestive heart failure. Treatment requires intubation and mechanical ventilation until the time the lungs recover sufficient function.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,icd11.foundation:370028006|UMLS:C1145670|SCTID:39871006|NCIT:C26872|MESH:D012131|MEDGEN:257837|ICD9:518.83|EFO:0009686|DOID:11162,,,,,,,,,,,,,,,,,,,,,,,,,"respiratory failure|failure, respiratory",chronic respiratory failure|acute respiratory failure,,,MONDO:0021113,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,respiratory failure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The significant impairment of gas exchange within the lungs resulting in hypoxia, hypercarbia, or both, to the extent that organ tissue perfusion is severely compromised. Causes include chronic obstructive pulmonary disease, asthma, emphysema, acute respiratory distress syndrome, pneumonia, pulmonary edema, pneumothorax, and congestive heart failure. Treatment requires intubation and mechanical ventilation until the time the lungs recover sufficient function.",,,,,,,,
http://purl.obolibrary.org/obo/HP_0011025,Abnormal cardiovascular system physiology,Abnormality of cardiovascular system physiology,Abnormal functionality of the cardiovascular system.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4023587,,,,,,,,,,,,,,,,,,,,,,,,,Abnormality of cardiovascular system physiology,,,,HP:0011025,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal cardiovascular system physiology,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Abnormal functionality of the cardiovascular system.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0011028,Abnormality of blood circulation,,An abnormality of blood circulation.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4023585|UMLS:C4020760,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0011028,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormality of blood circulation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An abnormality of blood circulation.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0011024,Abnormality of the gastrointestinal tract,Abnormality of the gastrointestinal tract|Abnormality of the GI tract,An abnormality of the gastrointestinal tract.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4023588|UMLS:C0017178|UMLS:C0012242|SNOMEDCT_US:53619000|SNOMEDCT_US:25374005|SNOMEDCT_US:119292006,,,,,,,,,,,,,,,,,,,,,,,,,Abnormality of the gastrointestinal tract|Abnormality of the GI tract,,,,HP:0011024,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormality of the gastrointestinal tract,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An abnormality of the gastrointestinal tract.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0011029,Internal hemorrhage,Internal haemorrhage|Internal bleeding,The presence of hemorrhage within the body.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C1390214,,,,,,,,,,,,,,,,,,,,,,,,,Internal haemorrhage|Internal bleeding,,,,HP:0011029,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Internal hemorrhage,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The presence of hemorrhage within the body.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_23089,chelate-forming peptide,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:23089,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,chelate-forming peptide,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100535,prior antiviral treatment during prior mpox infection,prior antiviral treatment during prior Monkeypox infection,A data field which describes the antiviral treatment for any infection during the prior Moneypox infection period.,FALSE,,,,,,,PCDS:prior_antiviral_treatment_during_prior_mpox_infection,,,,,,,PCDS: Provide a description of any antiviral treatment administered for viral infections (not including Mpox treatment) during the prior Mpox infection period. This field is meant to capture concurrent treatment information.,,,,,,,,,,,,,,PCDS: AZT was administered for HIV infection during the prior Mpox infection.,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,prior antiviral treatment during prior Monkeypox infection,prior antiviral treatment during prior Monkeypox infection slot,,,,GENEPIO:0100535,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,prior antiviral treatment during prior mpox infection,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the antiviral treatment for any infection during the prior Moneypox infection period.,,PCDS: Antiviral treatment for any infection during the prior Mpox infection period.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001026,canoeing / kayaking / boating,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001026,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,canoeing / kayaking / boating,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02021264,piece of sheep (raw),,A raw piece of sheep.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02021264,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of sheep (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw piece of sheep.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001151,untreated water,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001151,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,untreated water,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000414,mortality,,mortality is a ratio  formed by the number of deaths due to a disease divided by the total population size.,FALSE,,,,,,,,,,,,,,,,,,,,,adapted from: https://www.health.ny.gov/diseases/chronic/basicstat.htm,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000414,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,mortality,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra,,,,mortality is a ratio  formed by the number of deaths due to a disease divided by the total population size.,,,,,,,,
http://purl.obolibrary.org/obo/PATO_0001779,decreased strength,weak,A strength which is relatively low.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,weak,,,,PATO:0001779,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/pato.owl,http://purl.oboInOwllibrary.org/oboInOwl/pato#value_slim,,,,,,,,decreased strength,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A strength which is relatively low.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_23643,depsipeptide,,"A natural or synthetic compound having a sequence of amino and hydroxy carboxylic acid residues (usually α-amino and α-hydroxy acids), commonly but not necessarily regularly alternating.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:23643,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,depsipeptide,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A natural or synthetic compound having a sequence of amino and hydroxy carboxylic acid residues (usually α-amino and α-hydroxy acids), commonly but not necessarily regularly alternating.",,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_9989,Rodentia,,,FALSE,,,,,,,rodents|rodent,,,,,,,,,,,,,,,,,,,Rodentia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:9989,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Rodentia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_9986,Oryctolagus cuniculus,,,FALSE,,,,,,,rabbits|rabbit|domestic rabbit|Japanese white rabbit|European rabbit,,,,,,,,,,,,,,,,,,,Oryctolagus cuniculus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:9986,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Oryctolagus cuniculus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00005407,pork shoulder blade roast (boneless),,"A boneless meat cut derived from the shoulder blade, where the bones are removed, and the meat is rolled up into a cylindrical shape for cooking.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00005407,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pork shoulder blade roast (boneless),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A boneless meat cut derived from the shoulder blade, where the bones are removed, and the meat is rolled up into a cylindrical shape for cooking.",,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0009971,respiratory distress syndrome in premature infants,respiratory distress syndrome|RDS,"Infant acute respiratory distress syndrome is a lung disorder that affects premature infants caused by developmental insufficiency of surfactant production and structural immaturity of the lungs. The symptoms usually appear shortly after birth and may include tachypnea, tachycardia, chest wall retractions (recession), expiratory grunting, nasal flaring and cyanosis during breathing efforts.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,icd11.foundation:343716587|UMLS:C1968593|Orphanet:70587|OMIM:267450|NORD:1659|MESH:C566881|MEDGEN:368840|GARD:0000112,,,,,,,,,,,,,,,,,,,,,,,,respiratory distress syndrome|RDS,"respiratory distress syndrome in premature infants|Respiratory Distress Syndrome, Infant|RDS of prematurity",,,,MONDO:0009971,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#rare|http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar|http://purl.oboInOwllibrary.org/oboInOwl/mondo#nord_rare|http://purl.oboInOwllibrary.org/oboInOwl/mondo#gard_rare,,,,,,,,respiratory distress syndrome in premature infants,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Infant acute respiratory distress syndrome is a lung disorder that affects premature infants caused by developmental insufficiency of surfactant production and structural immaturity of the lungs. The symptoms usually appear shortly after birth and may include tachypnea, tachycardia, chest wall retractions (recession), expiratory grunting, nasal flaring and cyanosis during breathing efforts.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510271,Shoshone Bannock food claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0271,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510271,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,Shoshone Bannock food claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0002820,specimen collection swab stick,,A specimen collection device which is a specimen pad attached to a long handle used to collect specimen material.,FALSE,,,,,,,sponge-stick|sponge stick|sponge probe|polyprobe,,,,,,,,,,,,,,https://medical-dictionary.thefreedictionary.com/swab,,,,,specimen collection swab stick,,A swab stick allows a worker to collect samples without touching the inside of the bag,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0002820,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,specimen collection swab stick,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://orcid.org/0000-0002-8844-9165,,,,A specimen collection device which is a specimen pad attached to a long handle used to collect specimen material.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03460130,physical/chemical modification process,,A food modification process where physical or chemical changes are effected in any food ingredient through a physical or non-enzymatic chemical process.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=H0130,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03460130,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,physical/chemical modification process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A food modification process where physical or chemical changes are effected in any food ingredient through a physical or non-enzymatic chemical process.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0000988,Skin rash,Rash,A red eruption of the skin.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0015230|SNOMEDCT_US:271807003|SNOMEDCT_US:112625008|MEDDRA:10037844,,,,,,,,,,,,,,,,,,,,,,,,Rash,Skin rash,,,,HP:0000988,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Skin rash,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A red eruption of the skin.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000937,impromptu campground,,"A campground which has no pre-existing facilities installed or maintained by humans, usually found outside of anthropised ecosystems.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01000937,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,impromptu campground,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A campground which has no pre-existing facilities installed or maintained by humans, usually found outside of anthropised ecosystems.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100908,instantaneous flow rate measurement value,instantaneous flow rate measurement value,An environmental data field which describes the numerical value of a measured instantaneous fluid flow rate.,FALSE,,,,,,,PCDS:instantaneous_flow_rate_measurement_value,,,,,,,PCDS: Provide the numerical value of the measured flow rate.,,,,,,,,,,,,,,PCDS: 25,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,instantaneous flow rate measurement value,instantaneous flow rate measurement value slot,,,,GENEPIO:0100908,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,instantaneous flow rate measurement value,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the numerical value of a measured instantaneous fluid flow rate.,,PCDS: The numerical value of a measured instantaneous fluid flow rate.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001221,whirlpool water,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001221,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,whirlpool water,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HP_0000163,Abnormal oral cavity morphology,Abnormality of the oral cavity,"Abnormality of the oral cavity, i.e., the opening or hollow part of the mouth.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4025887,,,,,,,,,,,,,,,,,,,,,,,,,Abnormality of the oral cavity,,,,HP:0000163,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal oral cavity morphology,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Abnormality of the oral cavity, i.e., the opening or hollow part of the mouth.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001569,clinical or host-associated pathogen,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI:Pathogen.cl|GSCID-BRC:Clinical/host-associated pathogen,,,,,,GENEPIO:0001569,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,clinical or host-associated pathogen,,,http://purl.obolibrary.org/obo/GENEPIO_0001835|http://purl.obolibrary.org/obo/GENEPIO_0000002,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02021289,veal material,,Material that derives from some veal.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02021289,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,veal material,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Material that derives from some veal.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0001130,vertebral column,vertebral column skeleton|backbone,Subdivision of skeletal system that consists of all the vertebra and associated skeletal elements and joints in the body[modified from VSAO].,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:SpinalColumn|ZFA:0001559|XAO:0003074|Wikipedia:Vertebral_column|VSAO:0000185|VHOG:0001142|UMLS:C1519455|UMLS:C0037949|TAO:0001559|SCTID:44300000|NIF_Subcellular:sao1145756102|NCIT:C33588|NCIT:C12998|MESH:D013131|MA:0002416|GAID:106|FMA:13478|EMAPA:35919|EHDA:10119|EFO:0001369|BTO:0000818|AAO:0000734|AAO:0000699,,,,,,,,,,,,,,,,,,,,,,,,spine,,vertebral column skeleton|backbone,,,UBERON:0001130,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,vertebral column,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/BTO_0000818,,,,,,,,,,Subdivision of skeletal system that consists of all the vertebra and associated skeletal elements and joints in the body[modified from VSAO].,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001165,sequence submitter contact email,sequence submitter contact email,A data field which describes the email address of the agency responsible for submission of the sequence.,FALSE,,,,,,,PCDS:sequence_submitted_by_contact_email,,,,,,,PCDS: The email address can represent a specific individual or laboratory.,,,,,,,,,,,Not to be confused with 'sequenced by contact email' http://purl.obolibrary.org/obo/GENEPIO_0100422,,,PCDS: RespLab@lab.ca,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,sequence submitter contact email,sequence submitter contact email slot,,,,GENEPIO:0001165,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,sequence submitter contact email,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the email address of the agency responsible for submission of the sequence.,,PCDS: The email address of the agency responsible for submission of the sequence.,,,,,,
http://purl.obolibrary.org/obo/GAZ_00005680,"populated place, Cote d'Ivoire",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00005680,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Cote d'Ivoire",http://purl.obolibrary.org/obo/GAZ_00000906,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_28077,rifampicin,,A member of the class of rifamycins that is a a semisynthetic antibiotic derived from <em>Amycolatopsis rifamycinica</em> (previously known as <em>Amycolatopsis mediterranei</em> and <em>Streptomyces mediterranei</em>).,FALSE,,,,,,,Rif,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:8858|CHEBI:45308|CHEBI:26577,,,,,,CHEBI:28077,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,rifampicin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A member of the class of rifamycins that is a a semisynthetic antibiotic derived from <em>Amycolatopsis rifamycinica</em> (previously known as <em>Amycolatopsis mediterranei</em> and <em>Streptomyces mediterranei</em>).,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530152,agricultural food production,,A food production process involving the rearing of an organism.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0152,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530152,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,agricultural food production,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A food production process involving the rearing of an organism.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490382,thermosetting polymer container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0382,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490382,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,thermosetting polymer container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000015,beef top round steak (raw),,A raw beef top round steak.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000015,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef top round steak (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef top round steak.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00002005,air,,"The mixture of gases (roughly (by molar content/volume: 78% nitrogen, 20.95% oxygen, 0.93% argon, 0.038% carbon dioxide, trace amounts of other gases, and a variable amount (average around 1%) of water vapor) that surrounds the planet Earth.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Air|SWEETRealm:Air|LTER:18|EcoLexicon:air,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00002005,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,envoPolar|http://purl.oboInOwllibrary.org/oboInOwl/envo#EnvO-Lite-GSC,,,,,,,,air,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The mixture of gases (roughly (by molar content/volume: 78% nitrogen, 20.95% oxygen, 0.93% argon, 0.038% carbon dioxide, trace amounts of other gases, and a variable amount (average around 1%) of water vapor) that surrounds the planet Earth.",,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_8825,Neognathae,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,Neognathae,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:8825,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Neognathae,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000424,bison steak,,A bison meat cut that has a flat-cut appearance.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000424,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,bison steak,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A bison meat cut that has a flat-cut appearance.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0001933,value specification,,An information content entity that specifies a value within a classification scheme or on a quantitative scale.,FALSE,,,,,,,,,,,,,,"Damion Dooley's note: 
Often a value specification may need to allow for a ""data item state"" that indicates that a given datum doesn't have a recorded or observed or retrievable value, and the general reason for this state.",,,,,,,,,,,"This term is currently a descendant of 'information content entity', which requires that it 'is about' something. A value specification of '20g' for a measurement data item of the mass of a particular mouse 'is about' the mass of that mouse. However there are cases where a value specification is not clearly about any particular. In the future we may change 'value specification' to remove the 'is about' requirement.",value specification,,"The value of 'positive' in a classification scheme of ""positive or negative""; the value of '20g' on the quantitative scale of mass.",,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0001933,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,value specification,,,,,,,,,,,,,,,,,,,,,,,,,,,,PERSON:Bjoern Peters,,,,An information content entity that specifies a value within a classification scheme or on a quantitative scale.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0011848,Abdominal colic,,"A type of abdominal pain that comes and goes in waves, most often starting and ending suddenly and being of severe intensity.",FALSE,,,,,,,,,,,,,,"Colicky abdominal pain can be caused by kidney stones and gallstones, among other etiologies. This type of pain is thought to be caused by spasm, obstruction, or distension of any of the hollow viscera of the gastrointestinal system.",,,,,,,,,,,,,,,,,,UMLS:C0232488|SNOMEDCT_US:9991008,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0011848,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abdominal colic,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A type of abdominal pain that comes and goes in waves, most often starting and ending suddenly and being of severe intensity.",,,,,,,,
http://purl.obolibrary.org/obo/HP_0011843,Abnormal musculoskeletal physiology,Abnormality of musculoskeletal physiology,An abnormality of the function of the skeletal system.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4023164,,,,,,,,,,,,,,,,,,,,,,,,,Abnormality of musculoskeletal physiology,,,,HP:0011843,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal musculoskeletal physiology,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An abnormality of the function of the skeletal system.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0011842,Abnormal skeletal morphology,Abnormally shaped skeletal|Abnormality of skeletal morphology,"An abnormality of the form, structure, or size of the skeletal system.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4023165,,,,,,,,,,,,,,,,,,,,,,,,,Abnormally shaped skeletal|Abnormality of skeletal morphology,,,,HP:0011842,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal skeletal morphology,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An abnormality of the form, structure, or size of the skeletal system.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C132450,Stepmother,"Stepmother|Step Mother|MOTHER, STEP",A female who is married to a spouse with children whom are not biologically related to her.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Stepmother|Step Mother|MOTHER, STEP",,,,NCIT:C132450,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Stepmother,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A female who is married to a spouse with children whom are not biologically related to her.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_13148,acute cystitis,,A cystitis characterized by a sudden onset or severe symptoms.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:13148,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,acute cystitis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A cystitis characterized by a sudden onset or severe symptoms.,,,,,,,,
http://purl.obolibrary.org/obo/OBA_2040156,age of onset of coronary stenosis,age coronary stenosis symptoms begin|age at onset of coronary stenosis,The age at which coronary stenosis manifestations first appear.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,age coronary stenosis symptoms begin|age at onset of coronary stenosis,,,,OBA:2040156,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age of onset of coronary stenosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The age at which coronary stenosis manifestations first appear.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490425,screw cap or lid,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0425,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490425,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,screw cap or lid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_8232,piperacillin,,"A penicillin in which the substituent at position 6 of the penam ring is a 2-[(4-ethyl-2,3-dioxopiperazin-1-yl)carboxamido]-2-phenylacetamido group.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:505944|CHEBI:475140|CHEBI:472443,,,,,,CHEBI:8232,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,piperacillin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A penicillin in which the substituent at position 6 of the penam ring is a 2-[(4-ethyl-2,3-dioxopiperazin-1-yl)carboxamido]-2-phenylacetamido group.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001624,draft GenEpiO isolate environment model,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001624,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,draft GenEpiO isolate environment model,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02021239,lamb primal cut (raw),,A raw lamb primal cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02021239,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lamb primal cut (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw lamb primal cut.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001743,public health data standard,,A data standard related to public health research and service delivery.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001743,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public health data standard,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A data standard related to public health research and service delivery.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100116,obsolete: Illumina HiSeq 2000,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,Rehomed in OBI,,,,,,,,,,,,,,,,,,,GENEPIO:0100116,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: Illumina HiSeq 2000,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/OBI_0002001,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0004590,sphincter muscle,sphincter,"A structure, usually a circular muscle, that normally maintains constriction of a natural body passage or orifice and which relaxes as required by normal physiological functioning.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Sphincter|UMLS:C1409894|NCIT:C28381|FMA:75004,,,,,,,,,,,,,,,,,,,,,,,,,sphincter,,,,UBERON:0004590,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,sphincter muscle,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A structure, usually a circular muscle, that normally maintains constriction of a natural body passage or orifice and which relaxes as required by normal physiological functioning.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001259,health state record,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001259,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,health state record,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510013,non-food animal as food consumer,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0013,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510013,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,non-food animal as food consumer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100595,sequence file name,,A sequence data item which is the name of a file containing molecular sequence data.,FALSE,,,,,,,input file name,,,,,,,,,,,,,,Emma Griffiths,,,,,sequence file name,,"The sequence data for ""Zika virus envelope protein (E) gene, partial cds"" is stored in a file named ""AF372422-1.fasta"".",,,ready for release,http://purl.obolibrary.org/obo/OBI_0002874,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100595,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,sequence file name,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-1107-9135,,,https://github.com/obi-ontology/obi/issues/1579,A sequence data item which is the name of a file containing molecular sequence data.,,,,,,,,
http://purl.obolibrary.org/obo/OBA_2001010,age of onset of essential hypertension,age essential hypertension symptoms begin|age at onset of essential hypertension,The age at which essential hypertension manifestations first appear.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,age essential hypertension symptoms begin|age at onset of essential hypertension,,,,OBA:2001010,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age of onset of essential hypertension,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The age at which essential hypertension manifestations first appear.,,,,,,,,
http://purl.obolibrary.org/obo/APOLLO_SV_00000501,population colonization census,,A population census about the organisms specific to that population that were the host in some colonization acquisition.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,APOLLO_SV:00000501,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/apollo_sv.owl,,,,,,,,,population colonization census,,,,,,,,,,,,,,,,,,,,,,,,,,,,William R. Hogan|Matthew Diller,,,,A population census about the organisms specific to that population that were the host in some colonization acquisition.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03500041,food-grade metal surface,,A surface made of food-grade metal,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=N0041,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03500041,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food-grade metal surface,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A surface made of food-grade metal,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000096,beef 7-bone chuck steak (raw),,A raw beef 7-bone chuck steak.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000096,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef 7-bone chuck steak (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef 7-bone chuck steak.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_17939,puromycin,,"An aminonucleoside antibiotic, derived from the <em>Streptomyces alboniger</em> bacterium, that causes premature chain termination during translation taking place in the ribosome.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:8641|CHEBI:45182|CHEBI:26402|CHEBI:14970,,,,,,CHEBI:17939,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,puromycin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An aminonucleoside antibiotic, derived from the <em>Streptomyces alboniger</em> bacterium, that causes premature chain termination during translation taking place in the ribosome.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001079,serovar/serotype common name,,"A serotype or serovar is a distinct variation within a species of bacteria or virus or among immune cells of different individuals. These microorganisms, viruses, or cells are classified together based on their cell surface antigens, allowing the epidemiologic classification of organisms to the sub-species level",FALSE,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Serotype,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001079,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,serovar/serotype common name,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"A serotype or serovar is a distinct variation within a species of bacteria or virus or among immune cells of different individuals. These microorganisms, viruses, or cells are classified together based on their cell surface antigens, allowing the epidemiologic classification of organisms to the sub-species level",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0008858,pyloric canal,canalis pyloricus,The short narrow part of the stomach extending from the pyloric antrum to the pyloric sphincter.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Pyloric_canal|SCTID:245417002|FMA:14580|EMAPA:37944,,,,,,,,,,,,,,,,,,,,,,,,,canalis pyloricus,,,,UBERON:0008858,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,pyloric canal,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The short narrow part of the stomach extending from the pyloric antrum to the pyloric sphincter.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0002806,footwear cover,,A personal protective device which is an impermiable material which covers a shoe or boot in order to prevent spread of specific environmental contaminants.,FALSE,,,,,,,shoe cover|boot cover,,,,,,,,,,,,,,https://en.wiktionary.org/wiki/shoecover,,,,,footwear cover,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0002806,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,footwear cover,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://orcid.org/0000-0002-8844-9165,,,https://github.com/obi-ontology/obi/issues/1193,A personal protective device which is an impermiable material which covers a shoe or boot in order to prevent spread of specific environmental contaminants.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02021384,"veal roast (boneless, raw)",,A raw and boneless veal roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02021384,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"veal roast (boneless, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw and boneless veal roast.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001164,obsolete supply point / event,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001164,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete supply point / event,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100761,sampling event id,sampling event ID,"An identifier field which describes the user-defined identifier assigned to a specific event during which one or more samples are taken, from one or more sites.",FALSE,,,,,,,PCDS:sampling_event_id,,,,,,,"PCDS: Store the ID for the event during which a sample or samples were taken. For example, an event could be one person taking samples from multiple sites, or multiple people taking samples from one site.",,,,,,,,,,,Drafted 2023-07-27,,,PCDS: Event 120522.1,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,sampling event ID,sampling event ID slot,,,,GENEPIO:0100761,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-20T20:25:24.926Z,,,,,,,,,,,,,,,,,,,sampling event id,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An identifier field which describes the user-defined identifier assigned to a specific event during which one or more samples are taken, from one or more sites.",,"PCDS: The user-defined identifier assigned to a specific event during which one or more samples are taken, from one or more sites.",,,,,,
http://purl.obolibrary.org/obo/OBI_0002799,personal protective glove,,A personal protective device which is a glove.,FALSE,,,,,,,,,,,,,,,,,,,,,OBI,,,,,personal protective glove,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0002799,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,personal protective glove,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://orcid.org/0000-0002-8844-9165,,,https://github.com/obi-ontology/obi/issues/1193,A personal protective device which is a glove.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000085,library preparation kit,,"Packaged kits (containing adapters, indexes, enzymes, buffers etc), tailored for specific sequencing workflows, which allow the simplified preparation of sequencing-ready libraries for small genomes, amplicons, and plasmids.",FALSE,,,,,,,,,,,,,,,,,,,,,GROUP: IRIDA Ontology (Emma) and  http://applications.illumina.com/applications/sequencing/ngs-library-prep.html,,,,,,,"Illumina metagenomic protocol (part 15044223), with Nextera",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000085,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,library preparation kit,,,,,Sequencing,,,,,,,,,,,,,,,,,,,,,,,,,inferred from BCCDC interviews,,"Packaged kits (containing adapters, indexes, enzymes, buffers etc), tailored for specific sequencing workflows, which allow the simplified preparation of sequencing-ready libraries for small genomes, amplicons, and plasmids.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100898,digestive tract substance,,"Undigested food material, microbiota, and other materials found in the digestive tract.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100898,,,,,,,,,,,,,https://orcid.org/0000-0001-5275-8866,2023-11-28T14:09:34Z,,,,,,,,,,,,,,,,,,,digestive tract substance,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Undigested food material, microbiota, and other materials found in the digestive tract.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100015,surveillance of international border crossing by air travel or ground transport strategy,,An international travel-associated surveillance strategy in which individuals are selected if they have a travel history of crossing an international border via air travel or ground transport.,FALSE,,,,,,,Surveillance of international border crossing by air travel or ground transport,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100015,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,surveillance of international border crossing by air travel or ground transport strategy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An international travel-associated surveillance strategy in which individuals are selected if they have a travel history of crossing an international border via air travel or ground transport.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100278,data abstraction details,data abstraction details,A data field which describes how any data elements were altered to preserve patient privacy.,FALSE,,,,,,,PCDS:data_abstraction_details,,,,,,,"PCDS: If applicable, provide a description of how each data element was abstracted.",,,,,,,,,,,,,,PCDS: Jitter added to publicly shared collection dates to prevent re-identifiability.,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,data abstraction details,data abstraction details slot,,,,GENEPIO:0100278,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,data abstraction details,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes how any data elements were altered to preserve patient privacy.,,PCDS: A description of how any data elements were altered to preserve patient privacy.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001908,plane,,"In mathematics, a plane is a flat, two-dimensional surface. A plane is the two-dimensional analogue of a point (zero dimensions), a line (one dimension) and three-dimensional space. Planes can arise as subspaces of some higher-dimensional space, as with the walls of a room, or they may enjoy an independent existence in their own right, as in the setting of Euclidean geometry.""

""When working exclusively in two-dimensional Euclidean space, the definite article is used, so, the plane refers to the whole space.",FALSE,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Plane_(geometry),,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001908,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,plane,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"In mathematics, a plane is a flat, two-dimensional surface. A plane is the two-dimensional analogue of a point (zero dimensions), a line (one dimension) and three-dimensional space. Planes can arise as subspaces of some higher-dimensional space, as with the walls of a room, or they may enjoy an independent existence in their own right, as in the setting of Euclidean geometry.""

""When working exclusively in two-dimensional Euclidean space, the definite article is used, so, the plane refers to the whole space.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000111,GSCID-BRC Core Sample standard,,The GSCID-BRC Core Sample Standard is an extension of the GMI MDM data standard,FALSE,,,,,,,,,,,,,,,,,,,,,https://www.niaid.nih.gov/research/dmid-metadata-standards-core-sample,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000111,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/OBI_0100051,,,,,,GSCID-BRC Core Sample standard,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,The GSCID-BRC Core Sample Standard is an extension of the GMI MDM data standard,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510209,"\""naturally/natural\""label claim",,"Where a food naturally meets the condition(s) laid down in this Annex for the use of a nutritional claim, the term ""naturally/natural""may be used as a prefix to the claim [REGULATION (EC) No 1924/2006 Corrigendum2007-01-18].",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0209,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510209,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"""naturally/natural""label claim",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Where a food naturally meets the condition(s) laid down in this Annex for the use of a nutritional claim, the term ""naturally/natural""may be used as a prefix to the claim [REGULATION (EC) No 1924/2006 Corrigendum2007-01-18].",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001209,related specimen relationship type field category,Related specimen relationship type,A data field which describes the relationship of the current specimen to the specimen/sample previously submitted to the repository.,FALSE,,,,,,,PCDS:related_specimen_relationship_type_slot_group,,,,,,,"PCDS: Provide the tag that describes how the previous sample is related to the current sample being submitted from the pick list provided, so that the samples can be linked and tracked in the system.",,,,,,,,,,,,,,PCDS: Reinfection testing,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,Related specimen relationship type,Related specimen relationship type slot,,,,GENEPIO:0001209,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,related specimen relationship type field category,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the relationship of the current specimen to the specimen/sample previously submitted to the repository.,,PCDS: The relationship of the current specimen to the specimen/sample previously submitted to the repository.,,,,,,
http://purl.obolibrary.org/obo/UBERON_0002110,gallbladder,gall bladder|cholecyst,An organ that aids digestion and stores bile produced by the liver[WP].,FALSE,,,,,,,,,,,,,,"Rats do not have a gallbladder, but produce bile. The bile flows directly from the liver through the (hepatic) bile duct into the small intestine (Hebel and Stromberg, 1988)",,,,,,,,,,,,,,,,,,galen:Gallbladder|ZFA:0000208|XAO:0000135|Wikipedia:Gallbladder|VHOG:0000221|UMLS:C0016976|TAO:0000208|SCTID:181269000|NCIT:C12377|MIAA:0000072|MESH:D005704|MAT:0000072|MA:0000356|FMA:7202|EV:0100090|EMAPA:17202|EHDAA:8062|EHDAA2:0000699|EFO:0000853|CALOHA:TS-0394|BTO:0000493|AAO:0010114,,,,,,,,,,,,,,,,,,,,,,,,,gall bladder|cholecyst,,,,UBERON:0002110,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,gallbladder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An organ that aids digestion and stores bile produced by the liver[WP].,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0002114,duodenum,,"The first part of the small intestine. At the junction of the stomach and the duodenum the alimentary canal is inflected. The duodenum first goes anteriorly for a short distance, turns dorsally, and eventually caudally, thus it is a U-shaped structure with two horizontal sections (a ventral and a dorsal one).",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:Duodenum|XAO:0000236|Wikipedia:Duodenum|VHOG:0000052|UMLS:C0013303|SCTID:181247007|NCIT:C12263|MIAA:0000044|MESH:D004386|MAT:0000044|MA:0000338|GAID:284|FMA:7206|EV:0100073|EMAPA:18852|EFO:0000851|CALOHA:TS-0214|BTO:0000365|AAO:0010402,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0002114,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,duodenum,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The first part of the small intestine. At the junction of the stomach and the duodenum the alimentary canal is inflected. The duodenum first goes anteriorly for a short distance, turns dorsally, and eventually caudally, thus it is a U-shaped structure with two horizontal sections (a ventral and a dorsal one).",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0002113,kidney,reniculate kidney,"A paired organ of the urinary tract that produces urine and maintains bodily fluid homeostasis, blood pressure, pH levels, red blood cell production and skeleton mineralization.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:Kidney|XAO:0003267|Wikipedia:Kidney|UMLS:C0022646|MIAA:0000119|MESH:D007668|MAT:0000119|GAID:423|CALOHA:TS-0510|BTO:0000671|AAO:0000250,,,,,,,,,,,,,,,,,,,,,,,,,,reniculate kidney,,,UBERON:0002113,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,kidney,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A paired organ of the urinary tract that produces urine and maintains bodily fluid homeostasis, blood pressure, pH levels, red blood cell production and skeleton mineralization.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0002115,jejunum,,The portion of the small intestine that extends from the duodenum to the ileum.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:Jejunum|Wikipedia:Jejunum|VHOG:0000053|UMLS:C0022378|SCTID:181248002|NCIT:C12388|MIAA:0000045|MESH:D007583|MAT:0000045|MA:0000340|GAID:318|FMA:7207|EV:0100074|EMAPA:18666|EFO:0001333|CALOHA:TS-0496|BTO:0000657,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0002115,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,jejunum,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The portion of the small intestine that extends from the duodenum to the ileum.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0002116,ileum,,The portion of the small intestine that extends from the jejunum to the colon.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:Ileum|XAO:0000237|Wikipedia:Ileum|VHOG:0000647|UMLS:C0020885|SCTID:181249005|NCIT:C12387|MIAA:0000282|MESH:D007082|MAT:0000282|MA:0000339|GAID:315|FMA:7208|EV:0100075|EMAPA:32764|EFO:0001334|CALOHA:TS-0472|BTO:0000620|AAO:0010403,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0002116,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,ileum,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The portion of the small intestine that extends from the jejunum to the colon.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_71960,lividomycins,,"Any member of a family of aminoglycosidic antibiotics produced by the bacterium <em>Streptomyces lividus</em>. Note that one member of this class, lividomycin A, is also known as lividomycin.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:71960,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,lividomycins,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Any member of a family of aminoglycosidic antibiotics produced by the bacterium <em>Streptomyces lividus</em>. Note that one member of this class, lividomycin A, is also known as lividomycin.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490186,"plastic container, flexible or film",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0186,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490186,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"plastic container, flexible or film",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100109,Illumina HiScanSQ,,"A DNA sequencer manufactured by the Illumina corporation using sequence-by-synthesis chemistry, and contains a HiScan Reader for sequencing and microarray-based analyses as well as an ""SQ Module"" to support microfluidics.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100109,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,Illumina HiScanSQ,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A DNA sequencer manufactured by the Illumina corporation using sequence-by-synthesis chemistry, and contains a HiScan Reader for sequencing and microarray-based analyses as well as an ""SQ Module"" to support microfluidics.",,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00001998,soil,regolith,"An environmental material which is primarily composed of minerals, varying proportions of sand, silt, and clay, organic material such as humus, interstitial gases, liquids, and a broad range of resident micro- and macroorganisms.",FALSE,,,,,,,,,,,,,,"'In engineering terms, soil is referred to as regolith, or loose rock material that lies above the 'solid geology'. Soil is commonly referred to as ""earth"" or ""dirt""; technically, the term ""dirt"" should be restricted to displaced soil.' https://en.wikipedia.org/wiki/Soil

"" The upper limit of soil is the boundary between soil and air, shallow water, live plants, or plant materials that have not begun to decompose. Areas are not considered to have soil if the surface is permanently covered by water too deep (typically more than 2.5 meters) for the growth of rooted plants.

The lower boundary that separates soil from the nonsoil underneath is most difficult to define. Soil consists of horizons near the Earth's surface that, in contrast to the underlying parent material, have been altered by the interactions of climate, relief, and living organisms over time. Commonly, soil grades at its lower boundary to hard rock or to earthy materials virtually devoid of animals, roots, or other marks of biological activity. For purposes of classification, the lower boundary of soil is arbitrarily set at 200 cm.""  Soil taxonomy, 2nd Ed., quoted in http://www.nrcs.usda.gov/wps/portal/nrcs/detail/soils/edu/?cid=nrcs142p2_054280",,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Soil|SWEETRealm:Soil|SPIRE:Soil|LTER:535,,,,,,,,,,,,,,,,,,,,,,,,regolith,,,,,ENVO:00001998,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,http://purl.oboInOwllibrary.org/oboInOwl/envo#EnvO-Lite-GSC,,,,,,,,soil,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An environmental material which is primarily composed of minerals, varying proportions of sand, silt, and clay, organic material such as humus, interstitial gases, liquids, and a broad range of resident micro- and macroorganisms.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001397,host residence geo loc name state province territory,host residence geo_loc name (state/province/territory),A host geographical location field which describes the state or province or territory of residence of the host.,FALSE,,,,,,,PCDS:host_residence_geo_loc_name_state_province_territory,,,,,,,PCDS: Select the province/territory name from pick list provided in the template.,,,,,,,,,,,,,,PCDS: Quebec,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,host residence geo_loc name (state/province/territory),host residence geographical location state or province or territory name slot|host residence geographical location state or province or territory name field|host residence geo_loc name (state/province/territory) slot,,,,GENEPIO:0001397,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,host residence geo loc name state province territory,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A host geographical location field which describes the state or province or territory of residence of the host.,,PCDS: The state/province/territory of residence of the host.,,,,,,
http://purl.obolibrary.org/obo/PATO_0040051,monandrous,,A phenotypic sex quality inhering in a  plant organism or a population of plants in which the flowers have only one stamen.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PATO:0040051,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/pato.owl,,,,,,,,,monandrous,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A phenotypic sex quality inhering in a  plant organism or a population of plants in which the flowers have only one stamen.,,,,,,,,
http://purl.obolibrary.org/obo/PATO_0040050,diandrous,,A phenotypic sex quality inhering in a  plant organism or a population of plants in which the flowers have two stamens.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PATO:0040050,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/pato.owl,,,,,,,,,diandrous,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A phenotypic sex quality inhering in a  plant organism or a population of plants in which the flowers have two stamens.,,,,,,,,
http://purl.obolibrary.org/obo/PATO_0040056,female with DSD,intersex,A biological sex quality inhering in an individual or a population who are otherwise female of a non-hermaphroditic species who has ambiguous or atypical congenital development of the reproductive system.,FALSE,,,,,,,,,,,,,,"The term intersex is popular in use, but may be considered offensive when applied to humans. DSD can be expanded multiple ways to 'disorders/differences of sexual development/differentiation'.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,intersex,"female, DSD|female with disorder of sexual development|female with differences of sexual differentiation",,,,PATO:0040056,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/pato.owl,,,,,,,,,female with DSD,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A biological sex quality inhering in an individual or a population who are otherwise female of a non-hermaphroditic species who has ambiguous or atypical congenital development of the reproductive system.,,,,,,,,
http://purl.obolibrary.org/obo/PATO_0040052,protogynous,protogyny,A sequential hermaphroditic quality whereby organisms start out as female and change to male at a later life stage.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,protogyny,,,,PATO:0040052,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/pato.owl,,,,,,,,,protogynous,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A sequential hermaphroditic quality whereby organisms start out as female and change to male at a later life stage.,,,,,,,,
http://purl.obolibrary.org/obo/PATO_0040054,protogynous hermaphroditism,protogynous hermaphroditic|protogynous hermaphrodite,A protogynous quality whereby organisms start out as female and change to hermaphrodite at a later life stage.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,protogynous hermaphroditic|protogynous hermaphrodite,,,,PATO:0040054,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/pato.owl,,,,,,,,,protogynous hermaphroditism,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A protogynous quality whereby organisms start out as female and change to hermaphrodite at a later life stage.,,,,,,,,
http://purl.obolibrary.org/obo/PATO_0040053,protandrous,protandry,A sequential hermaphroditic quality whereby organisms start out as male and change to female at a later life stage.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,protandry,,,,PATO:0040053,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/pato.owl,,,,,,,,,protandrous,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A sequential hermaphroditic quality whereby organisms start out as male and change to female at a later life stage.,,,,,,,,
http://purl.obolibrary.org/obo/PATO_0040055,protandrous hermaphroditism,protandrous hermaphroditic|protandrous hermaphrodite,A protandrous quality whereby organisms start out as male and change to hermaphrodite at a later life stage.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,protandrous hermaphroditic|protandrous hermaphrodite,,,,PATO:0040055,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/pato.owl,,,,,,,,,protandrous hermaphroditism,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A protandrous quality whereby organisms start out as male and change to hermaphrodite at a later life stage.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0008994,equine glandular stomach,,"Stomach found in horses; includes cardiac, proper gastric and pyloric glandular zones.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,BTO:0003791,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0008994,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,equine glandular stomach,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Stomach found in horses; includes cardiac, proper gastric and pyloric glandular zones.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000015,obsolete: draft GenEpiO BioSample standard,,This is an organizational category for grouping parameters relevant to a biomedical sample.,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000015,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: draft GenEpiO BioSample standard,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,http://purl.obolibrary.org/obo/GENEPIO_0002083,,,This is an organizational category for grouping parameters relevant to a biomedical sample.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00005033,"populated place, Guadeloupe",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00005033,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Guadeloupe",http://purl.obolibrary.org/obo/GAZ_00067135,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000030,picosecond,ps,A time unit which is equal to 10^[-12] s.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ps,,,,UO:0000030,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,picosecond,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A time unit which is equal to 10^[-12] s.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000039,micromole,umol,A substance unit equal to a millionth of a mol or 10^[-6] mol.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,umol,,,,UO:0000039,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,micromole,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A substance unit equal to a millionth of a mol or 10^[-6] mol.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000032,hour,h,A time unit which is equal to 3600 seconds or 60 minutes.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,h,,,,UO:0000032,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,hour,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A time unit which is equal to 3600 seconds or 60 minutes.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000035,month,,A time unit which is approximately equal to the length of time of one of cycle of the moon's phases which in science is taken to be equal to 30 days.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:0000035,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,month,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A time unit which is approximately equal to the length of time of one of cycle of the moon's phases which in science is taken to be equal to 30 days.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000033,day,,A time unit which is equal to 24 hours.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:0000033,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,day,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A time unit which is equal to 24 hours.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000031,minute,min,A time unit which is equal to 60 seconds.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,min,,,,UO:0000031,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,minute,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A time unit which is equal to 60 seconds.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000036,year,,A time unit which is equal to 12 months which in science is taken to be equal to 365.25 days.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:0000036,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,year,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A time unit which is equal to 12 months which in science is taken to be equal to 365.25 days.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000034,week,,A time unit which is equal to 7 days.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:0000034,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,week,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A time unit which is equal to 7 days.,,,,,,,,
http://semanticscience.org/resource/SIO_000608,curve,,"A curve is a geometric entity that may be located in n-dimensional spatial region whose extension may be n-dimensional,  is composed of at least two fully connected points and does not intersect itself.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,resource:SIO_000608,,,,,,,,,,,,,,,,,,,,,,,,http://semanticscience.org/resource/SIO_000608,,,,,,,,,curve,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A curve is a geometric entity that may be located in n-dimensional spatial region whose extension may be n-dimensional,  is composed of at least two fully connected points and does not intersect itself.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490162,"aluminum tray or pan, laminate cover or wrapping",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0162,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490162,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"aluminum tray or pan, laminate cover or wrapping",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_87114,antibiotic fungicide,,Any antibiotic antifungal agent that has been used as a fungicide.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:87114,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,antibiotic fungicide,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any antibiotic antifungal agent that has been used as a fungicide.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000440,bison sirloin (raw),,A raw bison sirloin cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000440,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,bison sirloin (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw bison sirloin cut.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_03501129,educational facility,,A human construction in which people are educated.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:03501129,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,educational facility,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A human construction in which people are educated.,,,,,,,,
http://purl.obolibrary.org/obo/IAO_0000582,time stamped measurement datum,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,IAO:0000582,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/iao.owl,,,,,,,,,time stamped measurement datum,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001938,454 Genome Sequencer Junior,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI SRA: 454 GS Junior,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001938,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,454 Genome Sequencer Junior,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00007642,"populated place, Romania",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00007642,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Romania",http://purl.obolibrary.org/obo/GAZ_00002951,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00007644,"populated place, Trinidad and Tobago",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00007644,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Trinidad and Tobago",http://purl.obolibrary.org/obo/GAZ_00003767,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001934,2D entity,,A two dimensional entity is an entity composed of one or more points on a two dimensional surface.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001934,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,2D entity,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A two dimensional entity is an entity composed of one or more points on a two dimensional surface.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00010010,"populated place, Zambia",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00010010,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Zambia",http://purl.obolibrary.org/obo/GAZ_00001107,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001241,collection method,collection_method|collection method,A data field which describes the process used to collect the sample.,FALSE,,,,,,,PCDS:collection_method,,,,,,,"PCDS: Provide a descriptor of the collection method used for sampling. Use the picklist provided in the template. If not applicable, choose a null value.",,,,,,,,,,,,,,PCDS: Biopsy,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,collection_method|collection method,collection method slot,,,,GENEPIO:0001241,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,collection method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the process used to collect the sample.,,PCDS: The process used to collect the sample.,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510034,reduced energy food claim,,"A claim that a food is energy-reduced, and any claim likely to have the same meaning for the consumer, may only be made where the energy value is reduced by at least 30 %, with an indication of the characteristic(s) which make(s) the
food reduced in its total energy value [REGULATION (EC) No 1924/2006 Corrigendum 2007-01-18].

Food having at least 25% fewer calories per amount customarily consumed from the calories of a comparable food product. The complarable food may not be 'low calorie' [US FDA].",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0034,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510034,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,reduced energy food claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A claim that a food is energy-reduced, and any claim likely to have the same meaning for the consumer, may only be made where the energy value is reduced by at least 30 %, with an indication of the characteristic(s) which make(s) the
food reduced in its total energy value [REGULATION (EC) No 1924/2006 Corrigendum 2007-01-18].

Food having at least 25% fewer calories per amount customarily consumed from the calories of a comparable food product. The complarable food may not be 'low calorie' [US FDA].",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001753,exome specific data capture,,Exome: capturing exon-specific data.,FALSE,,,,,,,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/books/NBK54364/,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001753,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,exome specific data capture,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,Exome: capturing exon-specific data.,,,,exome,,,,
http://purl.obolibrary.org/obo/FOODON_02000302,pork sirloin chop (boneless),,A pork chop that is derived from boneless sirloin.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000302,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pork sirloin chop (boneless),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A pork chop that is derived from boneless sirloin.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0012437,Abnormal gallbladder morphology,Abnormal shape of gallbladder|Abnormal gallbladder structure,A structural anomaly of the gallbladder.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4022904,,,,,,,,,,,,,,,,,,,,,,,,,Abnormal shape of gallbladder|Abnormal gallbladder structure,,,,HP:0012437,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal gallbladder morphology,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A structural anomaly of the gallbladder.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03500044,food-grade steel surface,,A surface made of food-grade steel.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=N0044,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03500044,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food-grade steel surface,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A surface made of food-grade steel.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001090,recreational drug use status,,"",FALSE,,,,,,,,,,,,,,,,,,,,,"",,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001090,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,recreational drug use status,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001182,plant role,,,FALSE,,,,,,,,,,,,,http://purl.obolibrary.org/obo/NCBITaxon_33090,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001182,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,plant role,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002034,draft ISO sequence repository field,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002034,,,,,,,,,,,,,,2019-11-17T00:43:00Z,,,,,,,,,,,,,,,,,,,draft ISO sequence repository field,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://orcid.org/0000-0002-8844-9165,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HP_0011469,Nasal regurgitation,,Regurgitation of milk through the nose.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0232608|SNOMEDCT_US:85023004,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0011469,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Nasal regurgitation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Regurgitation of milk through the nose.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0011463,Childhood onset,Symptoms begin in childhood,Onset of disease at the age of between 1 and 5 years.,FALSE,,,,,,,,,,,,,,This term refers to ages up to but not including the fifth birthday (see Juvenile onset).,,,,,,,,,,,,,,,,,,UMLS:C1837352,,,,,,,,,,,,,,,,,,,,,,,HP:0003617|HP:0003586,,Symptoms begin in childhood,,,,HP:0011463,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,Childhood onset,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Onset of disease at the age of between 1 and 5 years.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000562,park,,"A bounded area of land, or water, usually in its natural or semi-natural (landscaped) state and set aside for some purpose, usually to do with recreation or conservation.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00000562,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,park,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A bounded area of land, or water, usually in its natural or semi-natural (landscaped) state and set aside for some purpose, usually to do with recreation or conservation.",,,,,,,,
http://purl.obolibrary.org/obo/IDO_0000445,resistance to drug,,A protective resistance that mitigates the damaging effects of a drug.,FALSE,,,,,,,drug resistance,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,IDO:0000445,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ido.owl,,,,,,,,,resistance to drug,,,,,,,,,,,,,,,,,,,,,,,,,,,,Lindsay Cowell|Alexander Diehl|Albert Goldfain,,,,A protective resistance that mitigates the damaging effects of a drug.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03430137,sliced,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=E0137,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03430137,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,sliced,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0002600,collecting specimen with swab,,"A specimen collection process that uses a swab as the collection device. A swab is an absorbent material (e.g. cotton) on a rod (e.g., wooden stick).",FALSE,,,,,,,,,,,,,,,,,,,,,OBIB,,,,,collecting specimen with swab,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0002600,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,collecting specimen with swab,,,,,,,,,,,,,,,,,,,,,,,,,,,,Chris Stoeckert,,,https://github.com/obi-ontology/obi/issues/910,"A specimen collection process that uses a swab as the collection device. A swab is an absorbent material (e.g. cotton) on a rod (e.g., wooden stick).",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490224,"multicomponent adhesive, organic solvent",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0224,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490224,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"multicomponent adhesive, organic solvent",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001229,infectious disease case datum,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001229,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,infectious disease case datum,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100979,AB 3500xL Genetic Analyzer,,"An Applied Biosystems sequencing instrument model which performs capillary electrophoresis to sequence DNA and has 24 capillaries, which can run 384 well plates.",FALSE,,,,,,,AB 3500xL sequencer,,,,,,,The 3500 series is the successor to the 3130 series and has a smaller footprint.,,,,,,,https://assets.thermofisher.com/TFS-Assets/LSG/Specification-Sheets/3500-Genetic-Analyzer-Specification-Sheet.pdf,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100979,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2023-11-28T18:23:15.862Z,,,,,,,,,,,,,,,,,,,AB 3500xL Genetic Analyzer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An Applied Biosystems sequencing instrument model which performs capillary electrophoresis to sequence DNA and has 24 capillaries, which can run 384 well plates.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00003388,food animal rearing,,The rearing of domesticated animals for food.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00003388,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food animal rearing,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The rearing of domesticated animals for food.,,,,,,,,
http://purl.obolibrary.org/obo/UO_1000032,hour based unit,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:1000032,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,hour based unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UO_1000034,week based unit,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:1000034,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,week based unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UO_1000035,month based unit,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:1000035,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,month based unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UO_1000036,year based unit,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:1000036,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,year based unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UO_1000031,minute based unit,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:1000031,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,minute based unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UO_1000033,day based unit,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:1000033,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,day based unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000175,beef flank,,A beef cut that is located below the loin primal.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000175,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef flank,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A beef cut that is located below the loin primal.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100283,host specimen voucher,host specimen voucher,An identifier field which describes the identifier for the physical specimen.,FALSE,,,,,,,PCDS:host_specimen_voucher,,,,,,,"PCDS: Include a URI (Uniform Resource Identifier) in the form of a URL providing a direct link to the physical host specimen. If the specimen was destroyed in the process of analysis, electronic images (e-vouchers) are an adequate substitute for a physical host voucher specimen. If a URI is not available, a museum-provided globally unique identifier (GUID) can be used. If no persistent unique identifier is available, follow the INSDC guidance for populating the voucher_specimen attribute using standard triplets for institution codes (i.e., /specimen_voucher='[<institution-code>:[<collection-code>:]]<specimen_id>'): http://www.insdc.org/controlled-vocabulary-specimenvoucher-qualifier",,,,,,,,,,,,,,"PCDS: URI example: http://portal.vertnet.org/o/fmnh/mammals?id=33e55cfe-330b-40d9-aaae-8d042cba7542, INSDC triplet example: UAM:Mamm:52179",,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,host specimen voucher,host specimen voucher slot|host specimen voucher identifier slothost specimen voucher ID field|host specimen voucher identifier field|host specimen voucher ID slot,,,,GENEPIO:0100283,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,host specimen voucher,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An identifier field which describes the identifier for the physical specimen.,,PCDS: Identifier for the physical specimen.,,,,,,
http://purl.obolibrary.org/obo/CHEBI_24650,hydroxamic acid,,"A compound, R<small><sub><em>k</em></sub></small>E(=O)<small><sub><em>l</em></sub></small>NHOH, derived from an oxoacid R<small><sub><em>k</em></sub></small>E(=O)<small><sub><em>l</em></sub></small>(OH) (<em>l</em> ≠ 0) by replacing ‒OH with ‒NHOH, and derivatives thereof. Specific examples of hydroxamic acids are preferably named as <em>N</em>-hydroxy amides.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:24650,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,hydroxamic acid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A compound, R<small><sub><em>k</em></sub></small>E(=O)<small><sub><em>l</em></sub></small>NHOH, derived from an oxoacid R<small><sub><em>k</em></sub></small>E(=O)<small><sub><em>l</em></sub></small>(OH) (<em>l</em> ≠ 0) by replacing ‒OH with ‒NHOH, and derivatives thereof. Specific examples of hydroxamic acids are preferably named as <em>N</em>-hydroxy amides.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000129,epi contact network model - human,,An epi contact network - human is contact information about a person who may be involved in transmitting a pathogen.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000129,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,epi contact network model - human,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,An epi contact network - human is contact information about a person who may be involved in transmitting a pathogen.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03450035,shallow frying process,,A chinese cooking technique similar to sauteing in which thick slices or chunks of floured or battered ingredients are slow seared over moderate to low heat.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=G0035,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03450035,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,shallow frying process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A chinese cooking technique similar to sauteing in which thick slices or chunks of floured or battered ingredients are slow seared over moderate to low heat.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_10399,seminal vesicle chronic gonorrhea,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:10399,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,seminal vesicle chronic gonorrhea,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_10398,pneumonic plague,,"A plague that results_in infection located_in lung, which results from direct inhalation of the bacillus and has_symptom fever, has_symptom chills, has_symptom cough and has_symptom difficulty breathing.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:10398,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,pneumonic plague,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A plague that results_in infection located_in lung, which results from direct inhalation of the bacillus and has_symptom fever, has_symptom chills, has_symptom cough and has_symptom difficulty breathing.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020699,"piece of poultry meat (with bone, raw)",,A raw piece of poultry meat that contains bone material.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020699,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"piece of poultry meat (with bone, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw piece of poultry meat that contains bone material.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0001687,contact representative role,,"A role inhering in a person who represents an institution, organization, or service provider and realized when communication is directed at them about the entity they represent.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Discussed on May 7, 2012 dev call
propose:contact role, type of organization role, and create shortcut relation between 'organization role' and 'organization' ?
Whether it works for communicating author in manuscript or not?
Tracker:
https://sourceforge.net/tracker/?func=detail&aid=3512891&group_id=177891&atid=886178",contact representative role,,,,,http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0001687,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,contact representative role,,,,,,,,,,,,,,,,,,,,,,,,,,,,Person: Chris Stoeckert,,,,"A role inhering in a person who represents an institution, organization, or service provider and realized when communication is directed at them about the entity they represent.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C166165,Treatment-Related Mortality,Treatment-Related Mortality|TRM,A death that is considered to be causally linked to a treatment.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Treatment-Related Mortality|TRM,,,,NCIT:C166165,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Treatment-Related Mortality,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A death that is considered to be causally linked to a treatment.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001692,listeria serotype 1/2b,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001692,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,listeria serotype 1/2b,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000051,beef chuck tender roast (raw),,A raw beef chuck tender roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000051,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef chuck tender roast (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef chuck tender roast.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_23449,cyclic peptide,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:23449,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,cyclic peptide,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100247,close indirect contact,face-to-face contact,A type of indirect contact where an individual sustains unprotected exposure by being within 6 feet of an infected individual over a sustained period of time.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,face-to-face contact,,,,GENEPIO:0100247,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,close indirect contact,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A type of indirect contact where an individual sustains unprotected exposure by being within 6 feet of an infected individual over a sustained period of time.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0003425,renal lymph node,perirenal lymph node|pararenal lymph node|para-renal lymph node,A lymph node that is located in a kidney [Automatically generated definition].,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C2699031|NCIT:C77646|MA:0002882|FMA:276799,,,,,,,,,,,,,,,,,,,,,,,,perirenal lymph node|pararenal lymph node|para-renal lymph node,lymph node of kidney|kidney lymph node,,,,UBERON:0003425,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,renal lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A lymph node that is located in a kidney [Automatically generated definition].,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02021377,veal primal cut (raw),,A raw veal primal cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02021377,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,veal primal cut (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw veal primal cut.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100186,contact with probable COVID-19 case exposure process,contact with probable COVID19 case,A process occuring within or in the vicinity of a human with a probable case of COVID-19 that exposes the recipient organism to SARS-CoV-2.,FALSE,,,,,,,Contact with Probable COVID-19 Case,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,contact with probable COVID19 case,,,,GENEPIO:0100186,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,contact with probable COVID-19 case exposure process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A process occuring within or in the vicinity of a human with a probable case of COVID-19 that exposes the recipient organism to SARS-CoV-2.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001856,2D space,,"This data type is for an item that can map to a point, line, set or area on a surface (2 dimensional space) or to the surface itself.  It can be a slice of a higher dimensional space.

It can be defined by a cartesian or radial coordinate system.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0001865,,,,,,,,,,,,,,,,,GENEPIO:0001856,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,2D space,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"This data type is for an item that can map to a point, line, set or area on a surface (2 dimensional space) or to the surface itself.  It can be a slice of a higher dimensional space.

It can be defined by a cartesian or radial coordinate system.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001216,body product,body_product|body product,A data field which describes the substance excreted/secreted from an organism.,FALSE,,,,,,,PCDS:body_product,,,,,,,"PCDS: Provide a descriptor if a body product was sampled. Use the picklist provided in the template. If a desired term is missing from the picklist, contact emma_griffiths@sfu.ca. If not applicable, do not leave blank. Choose a null value.",,,,,,,,,,,,,,PCDS: Feces,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,body_product|body product,body product slot,,,,GENEPIO:0001216,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,body product,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the substance excreted/secreted from an organism.,,PCDS: A substance excreted/secreted from an organism.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100477,public repository information field category,PCDS:contributor acknowledgement,A data field category which refers to public repository information fields.,FALSE,,,,,,,PCDS:public_repository_information_slot_group,,,,,,,,,,,,,,,,,,,,,,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,PCDS:contributor acknowledgement,contributor acknowledgement slot category,,,,GENEPIO:0100477,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,public repository information field category,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field category which refers to public repository information fields.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_46847,N-iminopiperazine,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:46847,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,N-iminopiperazine,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C124436,Sex at Birth,Sex at Birth,The physical sexual characteristics of the neonate at birth.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Sex at Birth,,,,NCIT:C124436,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Sex at Birth,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The physical sexual characteristics of the neonate at birth.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000627,feedlot,,A feedlot is a plot of land on which livestock are fattened for market,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01000627,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,feedlot,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A feedlot is a plot of land on which livestock are fattened for market,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001291,phage type salmonella (DT),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001291,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,phage type salmonella (DT),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001738,assembly and annotation project objective,,The assembly and annotation objective is the set of objectives that assembly and annotation techniques (including instruments and software platforms) applied to a sample are meant to satisfy.  This impacts on the quality control thresholds applied to the sequencing project.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001738,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,assembly and annotation project objective,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,The assembly and annotation objective is the set of objectives that assembly and annotation techniques (including instruments and software platforms) applied to a sample are meant to satisfy.  This impacts on the quality control thresholds applied to the sequencing project.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0005173,abdominal segment element,abdominal segment organ,An organ or element that is part of the adbominal segment of the organism. This region can be further subdivided into the abdominal cavity and the pelvic region.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MA:0000529|EMAPA:37062,,,,,,,,,,,,,,,,,,,,,,,,,abdominal segment organ,,,,UBERON:0005173,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,abdominal segment element,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An organ or element that is part of the adbominal segment of the organism. This region can be further subdivided into the abdominal cavity and the pelvic region.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0005179,pelvic region element,pelvis region organ|pelvis organ|pelvic element,"An organ or element that is part of the pelvic region. Examples: reproductive organs (in some organisms), urinary bladder, bones of the pelvis.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MA:0000543|EMAPA:37275,,,,,,,,,,,,,,,,,,,,,,,,,pelvis region organ|pelvis organ|pelvic element,,,,UBERON:0005179,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,pelvic region element,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An organ or element that is part of the pelvic region. Examples: reproductive organs (in some organisms), urinary bladder, bones of the pelvis.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0005172,abdomen element,abdomen organ,"An organ or element that is in the abdomen. Examples: spleen, intestine, kidney, abdominal mammary gland.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SCTID:272631008|MA:0000522,,,,,,,,,,,,,,,,,,,,,,,,,abdomen organ,,,,UBERON:0005172,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,abdomen element,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An organ or element that is in the abdomen. Examples: spleen, intestine, kidney, abdominal mammary gland.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0005177,trunk region element,trunk organ,An organ or element that part of the trunk region. The trunk region can be further subdividied into thoracic (including chest and thoracic cavity) and abdominal (including abdomen and pelbis) regions.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MA:0000516|EMAPA:37270,,,,,,,,,,,,,,,,,,,,,,,,,trunk organ,,,,UBERON:0005177,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,trunk region element,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An organ or element that part of the trunk region. The trunk region can be further subdividied into thoracic (including chest and thoracic cavity) and abdominal (including abdomen and pelbis) regions.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0005178,thoracic cavity element,thoracic cavity organ,"An organ or element that is in the thoracic cavity. Examples: lung, heart, longus colli.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MA:0000557|EMAPA:37273,,,,,,,,,,,,,,,,,,,,,,,,,thoracic cavity organ,,,,UBERON:0005178,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,thoracic cavity element,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An organ or element that is in the thoracic cavity. Examples: lung, heart, longus colli.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001250,natural environment specimen,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001250,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,natural environment specimen,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100213,insecure housing exposure process,homeless,A process occuring that exposes the recipient organism to a material entity as a consequence of said organism having insecure housing.,FALSE,,,,,,,Insecure Housing (Homeless),,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,homeless,,,,GENEPIO:0100213,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,insecure housing exposure process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A process occuring that exposes the recipient organism to a material entity as a consequence of said organism having insecure housing.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000151,century,,A time unit which is equal to 100 years.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:0000151,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,century,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A time unit which is equal to 100 years.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000150,nanosecond,ns,A time unit which is equal to one thousandth of one millionth of a second or 10^[-9] s.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ns,,,,UO:0000150,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,nanosecond,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A time unit which is equal to one thousandth of one millionth of a second or 10^[-9] s.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000152,half life,,A time unit which represents the period over which the activity or concentration of a specified chemical or element falls to half its original activity or concentration.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:0000152,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,half life,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A time unit which represents the period over which the activity or concentration of a specified chemical or element falls to half its original activity or concentration.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000935,campground,campsite|camping site|camping pitch|camping ground,"A part of an ecosystem which may be or has been used for one or more overnight stays by humans sheltering in tents, camper vans, caravans, or improvised shelters.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,campsite|camping site|camping pitch|camping ground,,,,ENVO:01000935,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,campground,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A part of an ecosystem which may be or has been used for one or more overnight stays by humans sheltering in tents, camper vans, caravans, or improvised shelters.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000000,beef round,,"A beef cut that comes from the 'round', the rear leg of the beef.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000000,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef round,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A beef cut that comes from the 'round', the rear leg of the beef.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100981,AB 3730xL Genetic Analyzer,,An Applied Biosystems sequencing instrument model which utilises an 96 capillary array electrophoresis system for sequencing.,FALSE,,,,,,,AB 3730xL sequencer,,,,,,,The 3730 series is the successor to the 3500 series. | Windows 10 and cloud enabled,,,,,,,https://tools.thermofisher.com/content/sfs/brochures/cms_042636.pdf,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100981,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2023-11-28T18:23:15.862Z,,,,,,,,,,,,,,,,,,,AB 3730xL Genetic Analyzer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An Applied Biosystems sequencing instrument model which utilises an 96 capillary array electrophoresis system for sequencing.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001289,PFGE pattern,,A visual pattern caused by DNA fragments concentrated in stratefied bands  in a Pulsed-field gel electrophoresis (PFGE) gel plate.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001289,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/NCIT_C53471,,,,,,PFGE pattern,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A visual pattern caused by DNA fragments concentrated in stratefied bands  in a Pulsed-field gel electrophoresis (PFGE) gel plate.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0002553,anatomical cavity,cavity,"Anatomical space which contains portions of one or more body substances and is bounded by the internal surface of one maximally connected anatomical structure. Examples: cranial cavity, pharyngeal recess space, nasal cavity, tooth socket, cavity of serous sac, lumen of stomach, lumen of artery, fornix of vagina.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:Cavity|NCIT:C34007|MA:0002447|FMA:67552|EMAPA:37442|BIRNLEX:1011,,,,,,,,,,,,,,,,,,,,,,,,cavity,,,,,UBERON:0002553,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,anatomical cavity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Anatomical space which contains portions of one or more body substances and is bounded by the internal surface of one maximally connected anatomical structure. Examples: cranial cavity, pharyngeal recess space, nasal cavity, tooth socket, cavity of serous sac, lumen of stomach, lumen of artery, fornix of vagina.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_8309,polymyxin B1,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:8309,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,polymyxin B1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/SO_0001085,sequence_conflict,conflict,Different sources report differing sequences.,FALSE,,,,,,,,,,,,,,Discrete.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,BS:00069,,conflict,,,,SO:0001085,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/so.owl,http://purl.oboInOwllibrary.org/oboInOwl/so#biosapiens,,,,,,,,sequence_conflict,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Different sources report differing sequences.,,,,,,,,
http://purl.obolibrary.org/obo/SO_0001082,polypeptide_sequencing_information,sequencing_information,Incompatibility in the sequence due to some experimental problem.,FALSE,,,,,,,,,,,,,,Range.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,BS:00125,,sequencing_information,,,,SO:0001082,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/so.owl,http://purl.oboInOwllibrary.org/oboInOwl/so#biosapiens,,,,,,,,polypeptide_sequencing_information,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Incompatibility in the sequence due to some experimental problem.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002116,rinsing for specimen collection,,"The process of removal and collection of specimen material from the surface of an entity by washing, or a similar application of fluids.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002116,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,rinsing for specimen collection,,,,,,,,,,,,,,,,,,,,,,,,,,,,Emma Griffiths,,,,"The process of removal and collection of specimen material from the surface of an entity by washing, or a similar application of fluids.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001917,hundredths,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001917,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,hundredths,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0012168,umbilical cord blood,,Blood that remains in the placenta and in the attached umbilical cord after childbirth[WP].,FALSE,,,,,,,,,,,,,,"Cord blood is collected because it contains stem cells, which can be used to treat hematopoietic and genetic disorders.[WP]",,,,,,,,,,,,,,,,,,Wikipedia:Cord_blood|MESH:D005312|EFO:0001942|CALOHA:TS-1079|BTO:0004053,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0012168,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,umbilical cord blood,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Blood that remains in the placenta and in the attached umbilical cord after childbirth[WP].,,,,,,,,
http://purl.obolibrary.org/obo/BTO_0002637,respiratory epithelium cell line,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,BTO:0002637,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/bto.owl,,,,,,,,,respiratory epithelium cell line,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0010712,limb skeleton subdivision,,Skeletal subdivision that is a segment of the limb skeleton.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,VSAO:0005018,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0010712,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,limb skeleton subdivision,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Skeletal subdivision that is a segment of the limb skeleton.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_9321,sulbactam,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:9321,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,sulbactam,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_9329,sulfadoxine,,A sulfonamide consisting of pyrimidine having methoxy substituents at the 5- and 6-positions and a 4-aminobenzenesulfonamido group at the 4-position. In combination with the antiprotozoal pyrimethamine (CHEBI:8673) it is used as an antimalarial.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:9329,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,sulfadoxine,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A sulfonamide consisting of pyrimidine having methoxy substituents at the 5- and 6-positions and a 4-aminobenzenesulfonamido group at the 4-position. In combination with the antiprotozoal pyrimethamine (CHEBI:8673) it is used as an antimalarial.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_9328,sulfadiazine,,A sulfonamide consisting of pyrimidine with a 4-aminobenzenesulfonamido group at the 2-position.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:9328,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,sulfadiazine,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A sulfonamide consisting of pyrimidine with a 4-aminobenzenesulfonamido group at the 2-position.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_229,female reproductive system disease,,"A reproductive system disease that impairs the ability to reproduce and is located in the uterus, vagina, cervix, ovaries or fallopian tubes.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:229,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,female reproductive system disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A reproductive system disease that impairs the ability to reproduce and is located in the uterus, vagina, cervix, ovaries or fallopian tubes.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_281056,loracarbef anion,,The conjugate base of loracarbef.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:281056,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,loracarbef anion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The conjugate base of loracarbef.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510049,fiber special claim,,"Food that is promoted as being either high or low in dietary fiber (often called simply 'fiber'). If the food is not low in total fat, total fat must be stated in conjunction with claim such as 'more fiber'.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0049,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510049,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,fiber special claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Food that is promoted as being either high or low in dietary fiber (often called simply 'fiber'). If the food is not low in total fat, total fat must be stated in conjunction with claim such as 'more fiber'.",,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00005015,"populated place, Ukraine",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00005015,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Ukraine",http://purl.obolibrary.org/obo/GAZ_00002724,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001478,r1 fastq filepath,r1 fastq filepath,A data field which describes the filepath of the read 1 (r1) FASTQ file.,FALSE,,,,,,,PCDS:r1_fastq_filepath,,,,,,,PCDS: Provide the filepath of the r1 FASTQ file.,,,,,,,,,,,,,,PCDS: /User/Documents/RespLab/Data/ABC123_S1_L001_R1_001.fastq.gz,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,r1 fastq filepath,r1 fastq filepath slot,,,,GENEPIO:0001478,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,r1 fastq filepath,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the filepath of the read 1 (r1) FASTQ file.,,PCDS: The filepath of the r1 FASTQ file.,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000140,drainage ditch,,A ditch that collects water from the surrounding land.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Geonames:H.DTCHD|FTT:402|FTT:129|EcoLexicon:drainage_ditch,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00000140,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,drainage ditch,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A ditch that collects water from the surrounding land.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_4705,double-stranded DNA,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:4705,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,double-stranded DNA,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C107103,Sudden Death,"Sudden Death, NOS|Sudden Death",An unexpected death without warning.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Sudden Death, NOS|Sudden Death",,,,NCIT:C107103,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Sudden Death,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An unexpected death without warning.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_23403,coumarins,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:23403,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,coumarins,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001450,library preparation kit,library_preparation_kit|library preparation kit,A data field which describes the name of the library preparation kit used to generate the library being sequenced.,FALSE,,,,,,,PCDS:library_preparation_kit,,,,,,,PCDS: Provide the name of the library preparation kit used.,,,,,,,,,,,Some specification definitions may be more specific on the type of library preparation kit used (e.g. DNA).,,,PCDS: Nextera XT,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,library_preparation_kit|library preparation kit,library preparation kit slot,,,,GENEPIO:0001450,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,library preparation kit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the name of the library preparation kit used to generate the library being sequenced.,,PCDS: The name of the DNA library preparation kit used to generate the library being sequenced.,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000063,water body,hydrographic feature,An accumulation of water of varying size.,FALSE,,,,,,,,,,,,,,"The term body of water most often refers to large accumulations of water, such as oceans, seas, and lakes, but it includes smaller pools of water such as ponds, wetlands, or more rarely, puddles. A body of water does not have to be still or contained; Rivers, streams, canals, and other geographical features where water moves from one place to another are also considered bodies of water.",,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Water_body|TGN:21101|TGN:21100|SWEETRealm:BodyOfWater|FTT:827|FTT:280|FTT:131|EcoLexicon:waterbody,,,,,,,,,,,,,,,,,,,,,,,,hydrographic feature,waterbody|body of water|bodies of water|aquatic feature,,,,ENVO:00000063,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,water body,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An accumulation of water of varying size.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001237,specimen source material category,,"The type of material from which the specimen was obtained. Specimens are usually categorized as food, body products or tissues, or environmental material.",FALSE,,,,,,,specimen type (host or environmental context),,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001237,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,specimen source material category,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"The type of material from which the specimen was obtained. Specimens are usually categorized as food, body products or tissues, or environmental material.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001575,industrial processing relevance,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001575,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,industrial processing relevance,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000219,beef ribeye cap roll,,A cut that is portioned by slicing at a right angle to the grain or direction of muscle fibre.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000219,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef ribeye cap roll,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A cut that is portioned by slicing at a right angle to the grain or direction of muscle fibre.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C89342,Toddler,Toddler,An age group comprised of individuals between 12 and 18 months of age.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Toddler,,,,NCIT:C89342,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Toddler,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An age group comprised of individuals between 12 and 18 months of age.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002155,date of diagnosis (ISO 8601),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002155,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,date of diagnosis (ISO 8601),,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/EFO_0004953,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0657,Somali in Kenya (SGDP),Somali,A population made up of 1 samples from Somali individuals recruited in Kenya as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation African.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Somali,,,,HANCESTRO:0657,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Somali in Kenya (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 1 samples from Somali individuals recruited in Kenya as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation African.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0650,Luo in Kenya (SGDP),Luo,A population made up of 2 samples from Luo individuals recruited in Kenya as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation African.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Luo,,,,HANCESTRO:0650,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Luo in Kenya (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Luo individuals recruited in Kenya as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation African.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0652,Masai in Kenya (SGDP),Masai|MKK,A population made up of 3 samples from Masai individuals recruited in Kenya as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation African.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Masai|MKK,,,,HANCESTRO:0652,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Masai in Kenya (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 3 samples from Masai individuals recruited in Kenya as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation African.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0653,Mbuti in Congo (SGDP),Mbuti,A population made up of 4 samples from Mbuti individuals recruited in Congo as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation African.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Mbuti,,,,HANCESTRO:0653,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Mbuti in Congo (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 4 samples from Mbuti individuals recruited in Congo as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation African.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0654,Mende in Sierra Leone (SGDP),Mende,A population made up of 2 samples from Mende individuals recruited in Sierra Leone as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation African.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Mende,,,,HANCESTRO:0654,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Mende in Sierra Leone (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Mende individuals recruited in Sierra Leone as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation African.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0651,Mandenka in Senegal (SGDP),Mandenka,A population made up of 3 samples from Mandenka individuals recruited in Senegal as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation African.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Mandenka,,,,HANCESTRO:0651,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Mandenka in Senegal (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 3 samples from Mandenka individuals recruited in Senegal as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation African.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0656,Saharawi in Western Sahara (Morocco) (SGDP),Saharawi,A population made up of 2 samples from Saharawi individuals recruited in Western Sahara (Morocco) as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation African.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Saharawi,,,,HANCESTRO:0656,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Saharawi in Western Sahara (Morocco) (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Saharawi individuals recruited in Western Sahara (Morocco) as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation African.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0659,African Ancestry in Southwest US (1KGP),African Ancestry SW|ASW,A population made up of 113 samples from African Ancestry individuals recruited in Southwest US as part of the 1000 Genomes Project. The population was assigned by the collecting project to the superpopulation African.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,African Ancestry SW|ASW,,,,HANCESTRO:0659,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,African Ancestry in Southwest US (1KGP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 113 samples from African Ancestry individuals recruited in Southwest US as part of the 1000 Genomes Project. The population was assigned by the collecting project to the superpopulation African.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0655,Mozabite in Algeria (SGDP),Mozabite,A population made up of 2 samples from Mozabite individuals recruited in Algeria as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation African.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Mozabite,,,,HANCESTRO:0655,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Mozabite in Algeria (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Mozabite individuals recruited in Algeria as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation African.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0658,Yoruba in Nigeria (SGDP),Yoruba,A population made up of 3 samples from Yoruba individuals recruited in Nigeria as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation African.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Yoruba,,,,HANCESTRO:0658,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Yoruba in Nigeria (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 3 samples from Yoruba individuals recruited in Nigeria as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation African.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0009006,deep inguinal lymph node,nodus lymphaticus inguinalis profundus|femoral lymph node|deep inguinal node,"One of several small inconstant lymph nodes, proximal, intermediate and distal deep to the fascia lata and medial to the femoral vein; they receive lymph from the deep structures of the lower limb, from the glans penis and from superficial inguinal nodes; efferents pass to the external iliac nodes.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Deep_inguinal_lymph_nodes|SCTID:65266007|FMA:44225|BTO:0004548,,,,,,,,,,,,,,,,,,,,,,,,,nodus lymphaticus inguinalis profundus|femoral lymph node|deep inguinal node,,,,UBERON:0009006,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,deep inguinal lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"One of several small inconstant lymph nodes, proximal, intermediate and distal deep to the fascia lata and medial to the femoral vein; they receive lymph from the deep structures of the lower limb, from the glans penis and from superficial inguinal nodes; efferents pass to the external iliac nodes.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0009007,superficial inguinal lymph node,superficial inguinal node|nodus lymphaticus inguinalis superficialis|lymph node of Rosenmuller|lymph node of Cloquet,"A group of 12-20 lymph nodes that lie in the subcutaneous tissue below the inguinal ligament and along the terminal part of the great saphenous vein; they drain the skin and subcutaneous tissue of the lower abdominal wall, perineum, buttocks, external genitalia, and lower limbs.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Superficial_inguinal_lymph_nodes|SCTID:113340006|FMA:5036|BTO:0004549,,,,,,,,,,,,,,,,,,,,,,,,,superficial inguinal node|nodus lymphaticus inguinalis superficialis|lymph node of Rosenmuller|lymph node of Cloquet,,,,UBERON:0009007,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,superficial inguinal lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A group of 12-20 lymph nodes that lie in the subcutaneous tissue below the inguinal ligament and along the terminal part of the great saphenous vein; they drain the skin and subcutaneous tissue of the lower abdominal wall, perineum, buttocks, external genitalia, and lower limbs.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102078,pathoplexus accession,,PCDS: Store the accession returned from the Pathoplexus submission.,FALSE,,,,,,,PCDS:pathoplexus_accession,,,,,,,PCDS: Store the accession returned from the Pathoplexus submission.,,,,,,,,,,,,,,PCDS: PP_0015K5U.1,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102078,,,,,,,,,,,,,,2026-04-09T18:02:29.914Z,,,,,,,,,,,,,,,,,,,pathoplexus accession,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PCDS: The Pathoplexus accession number assigned to the sequence.,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000415,butchery cut of beef (raw),,A raw butchery cut of beef.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000415,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,butchery cut of beef (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw butchery cut of beef.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000261,"lamb sirloin half (shank off, semi-boneless, raw)",,"A cut from lamb sirloin half (shank off, semi-boneless) that is raw.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000261,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"lamb sirloin half (shank off, semi-boneless, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A cut from lamb sirloin half (shank off, semi-boneless) that is raw.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001979,ChIP-Seq strategy,,Direct sequencing of chromatin immunoprecipitates.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI SRA: ChIP-Seq,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001979,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ChIP-Seq strategy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Direct sequencing of chromatin immunoprecipitates.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0031417,Rhinorrhea,Runny Nose|Nasal Discharge,Increased discharge of mucus from the nose.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Runny Nose|Nasal Discharge,,,,HP:0031417,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Rhinorrhea,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Increased discharge of mucus from the nose.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0031416,Abnormal nasal mucus secretion,,"Any deviation from the normal quantity of secretion of nasal mucus, a thick viscous liquid produced by the mucous membranes of the nose.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0031416,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal nasal mucus secretion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Any deviation from the normal quantity of secretion of nasal mucus, a thick viscous liquid produced by the mucous membranes of the nose.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100446,animal source of food,food_product_properties|food product properties,A data field which describes the animal from which the food product was derived.,FALSE,,,,,,,PCDS:animal_source_of_food,,,,,,,"PCDS: Provide the common name of the animal. If not applicable, leave blank. Multiple entries can be provided, separated by a comma.",,,,,,,,,,,,,,PCDS: Chicken [NCBITaxon:9031],,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,food_product_properties|food product properties,food product properties slot,,,,GENEPIO:0100446,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,animal source of food,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the animal from which the food product was derived.,,PCDS: The animal from which the food product was derived.,,,,,,
http://purl.obolibrary.org/obo/CHEBI_33836,benzenoid aromatic compound,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:33836,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,benzenoid aromatic compound,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000211,beef ribeye roll,,A meat cut that is located above the short rib in the rib primal between the Chuck and Loin primal.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000211,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef ribeye roll,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A meat cut that is located above the short rib in the rib primal between the Chuck and Loin primal.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000040,nitrate concentration,,An environmental datum which describes the concentration of nitrate of a sample.,FALSE,,,,,,,,,,,,,,,,,,,,,GROUP: MIxS enviro package,,,,,,,micromole per liter,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000040,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,,,,,,,nitrate concentration,,,,,Environmental Isolate,,,,,,,,,,,,,,,,,,,,,,Nitrate,,,GROUP: MIxS,,An environmental datum which describes the concentration of nitrate of a sample.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00005421,Province (Madagascar),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00005421,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Province (Madagascar),http://purl.obolibrary.org/obo/GAZ_00001108,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001097,second line or reserve tuberculosis drug,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001097,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,second line or reserve tuberculosis drug,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0101018,positive control specimen role,,"A control specimen that is expected to yield a positive result, to establish a reference baseline for an experiment.",FALSE,,,,,,,positive control specimen|positive control sample,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Scientific_control,,,,,,,,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0101018,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-11-20T16:24:25Z,,,,,,,,,,,,,,,,,,,positive control specimen role,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A control specimen that is expected to yield a positive result, to establish a reference baseline for an experiment.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510116,no msg added claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0116,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510116,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,no msg added claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/OMIT_0013001,"Remission, Spontaneous",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OMIT:0013001,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/omit.owl,,,,,,,,,"Remission, Spontaneous",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510210,source of {name of vitamin/s}  and/or {name of mineral/s} nutrition claim,,"A claim that a food is a source of vitamins and/or minerals, and any claim likely to have the same meaning for the consumer, may only be made where the product contains at least a significant amount as defined in the Annex to Directive 90/496/EEC or an amount provided for by derogations granted according to Article 6 of Regulation (EC) No 1925/2006 of the European Parliament and of the Council of 20 December 2006 on the addition of vitamins and minerals and of certain other substances to foods [REGULATION (EC) No 1924/2006 Corrigendum2007-01-18].",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0210,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510210,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,source of {name of vitamin/s}  and/or {name of mineral/s} nutrition claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A claim that a food is a source of vitamins and/or minerals, and any claim likely to have the same meaning for the consumer, may only be made where the product contains at least a significant amount as defined in the Annex to Directive 90/496/EEC or an amount provided for by derogations granted according to Article 6 of Regulation (EC) No 1925/2006 of the European Parliament and of the Council of 20 December 2006 on the addition of vitamins and minerals and of certain other substances to foods [REGULATION (EC) No 1924/2006 Corrigendum2007-01-18].",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0001913,milk,mammary gland milk,An emulsion of fat globules within a fluid that is secreted by the mammary gland during lactation.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:Milk|Wikipedia:Breast_milk|VHOG:0001263|UMLS:C1511310|NCIT:C13401|MIAA:0000056|MESH:D008892|MAT:0000056|MA:0002552|GAID:1230|FMA:62100|EV:0100126|ENVO:02000031|EMAPA:36540|CALOHA:TS-0636|BTO:0000868,,,,,,,,,,,,,,,,,,,,,,,,,mammary gland milk,,,,UBERON:0001913,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,milk,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An emulsion of fat globules within a fluid that is secreted by the mammary gland during lactation.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0001914,colostrum,,"The thin, yellow, serous fluid secreted by the mammary glands during pregnancy and immediately postpartum before lactation begins. It consists of immunologically active substances, white blood cells, water, protein, fat, and carbohydrates.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Colostrum|UMLS:C0009413|NCIT:C32348|MESH:D003126|MA:0002551|GAID:1159|FMA:62101|CALOHA:TS-0167|BTO:0000276,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0001914,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,colostrum,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The thin, yellow, serous fluid secreted by the mammary glands during pregnancy and immediately postpartum before lactation begins. It consists of immunologically active substances, white blood cells, water, protein, fat, and carbohydrates.",,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00002113,deep marine sediment,deep marine sediments,"Sediment that accumulates in the flat or very gently sloping areas of the deep ocean basin floor. The three main types of deep marine sediment, also known as pelagic sediment, are siliceous oozes, calcareous oozes, and red clays.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Marine_sediment|SWEETRealm:MarineSediment|EcoLexicon:marine_sedimentation|EcoLexicon:marine_sediment,,,,,,,,,,,,,,,,,,,,,,,,,deep marine sediments,,,,ENVO:00002113,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,envoPolar,,,,,,,,deep marine sediment,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Sediment that accumulates in the flat or very gently sloping areas of the deep ocean basin floor. The three main types of deep marine sediment, also known as pelagic sediment, are siliceous oozes, calcareous oozes, and red clays.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_46920,N-methylpiperazine,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:46920,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,N-methylpiperazine,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100809,total nitrogen (TN) measurement unit,total nitrogen (TN) measurement unit,An environmental data field which describes the units of a measurement of total nitrogen (TN).,FALSE,,,,,,,PCDS:total_nitrogen_tn_measurement_unit,,,,,,,PCDS: Provide the units of the measured TN.,,,,,,,,,,,,,,PCDS: milligram per liter (mg/L),,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,total nitrogen (TN) measurement unit,total nitrogen (TN) measurement unit slot,,,,GENEPIO:0100809,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,total nitrogen (TN) measurement unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the units of a measurement of total nitrogen (TN).,,PCDS: The units of a measurement of total nitrogen (TN).,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002684,SOLiD sequening platform,,A sequencing platform provided by Life Technologies Corporation,FALSE,,,,,,,Sequencing by Oligonucleotide Ligation and Detection,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002684,,,,,,,,,,,,,,2020-04-24T22:55:31Z,,,,,,,,,,,,,,,,,,,SOLiD sequening platform,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://orcid.org/0000-0002-8844-9165,,,,A sequencing platform provided by Life Technologies Corporation,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000177,grassland biome,,A grassland ecosystem in which dominant ecological communities have reached their climax successional state.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SPIRE:Savannah_or_grassland,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01000177,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,grassland biome,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A grassland ecosystem in which dominant ecological communities have reached their climax successional state.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0033696,Pseudo-chilblain,Chilblain-like lesion,"Acral areas of erythema with vesicles or pustules. The lesions resemble chilblains and have purpuric areas, affecting hands and feet.",FALSE,,,,,,,,,,,,,,This condition is termed pseudo-chilblain because of the similar appearance of these lesions to chilblains. Pseudochilblains may be observed in persons with COVID-19 without documented exposure to cold or other risk factors for chilblains.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Chilblain-like lesion,,,,HP:0033696,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Pseudo-chilblain,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Acral areas of erythema with vesicles or pustules. The lesions resemble chilblains and have purpuric areas, affecting hands and feet.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100105,Illumina sequencing instrument model,,A DNA sequencer manufactured by the Illumina corporation.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100105,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,Illumina sequencing instrument model,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A DNA sequencer manufactured by the Illumina corporation.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001887,landmark,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001887,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,landmark,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0007254,breast cancer,primary breast cancer,A primary or metastatic malignant neoplasm involving the breast. The vast majority of cases are carcinomas arising from the breast parenchyma or the nipple. Malignant breast neoplasms occur more frequently in females than in males.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,icd11.foundation:1047754165|UMLS:C0006142|SCTID:254837009|NCIT:C9335|MEDGEN:651|ICD9:174.8|ICD10CM:C50|DOID:1612,,,,,,,,,,,,,,,,,,,,,,,,mammary tumour|mammary tumor|breast tumour|breast tumor,malignant tumour of the breast|malignant tumour of breast|malignant tumor of the breast|malignant tumor of breast|malignant neoplasm of the breast|malignant neoplasm of breast|malignant breast tumour|malignant breast tumor|malignant breast neoplasm|cancer of breast|breast cancer,primary breast cancer,,,MONDO:0007254,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,breast cancer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A primary or metastatic malignant neoplasm involving the breast. The vast majority of cases are carcinomas arising from the breast parenchyma or the nipple. Malignant breast neoplasms occur more frequently in females than in males.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100245,funeral exposure datum,,"A human social event in which humans gather for a ceremony connected with the final disposition of a corpse, such as a burial or cremation.",FALSE,,,,,,,Funeral,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Funeral,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100245,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,funeral exposure datum,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A human social event in which humans gather for a ceremony connected with the final disposition of a corpse, such as a burial or cremation.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000094,beef square cut chuck (raw),,A raw beef square cut chuck.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000094,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef square cut chuck (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef square cut chuck.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100759,enterobase accession,Enterobase accession,An identifier field which describes the alphanumeric string to a sequence in Enterobase archives.,FALSE,,,,,,,PCDS:enterobase_accession,,,,,,,PCDS: Store the barcode assigned to the submitted sequence. Enterobase barcodes start with different 3 letter codes depending on the organism.,,,,,,,,,,,Drafted 2023-07-27,,,PCDS: SAL_AA0019AA_ST,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,Enterobase accession,Enterobase accession slot,,,,GENEPIO:0100759,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-20T20:25:24.926Z,,,,,,,,,,,,,,,,,,,enterobase accession,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An identifier field which describes the alphanumeric string to a sequence in Enterobase archives.,,PCDS: The identifier assigned to a sequence in Enterobase archives.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000118,specimen collection location - country,,The country of the site of a given specimen collection event.,FALSE,,,,,,,,,,,,,,,,,,,,,NIAID GSCID-BRC metadata working group,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000118,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,specimen collection location - country,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/NCIT_C25464,,,,Damion Dooley,,,,The country of the site of a given specimen collection event.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0060564,spinal disease,,A bone disease that is located_in the spine.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0060564,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,spinal disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A bone disease that is located_in the spine.,,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000423,observed risk,,the proportion of individuals in a population with the outcome of interest,FALSE,,,,,,,,,,,,,,,,,,,,,"adapted from:
http://handbook.cochrane.org/chapter_9/9_2_2_4_measure_of_absolute_effect_the_risk_difference.htm",,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000423,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,observed risk,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra,,,,the proportion of individuals in a population with the outcome of interest,,,,,,,,
http://www.ebi.ac.uk/efo/EFO_1001491,abortion,loss of pregnancy,the ending of pregnancy by removing a fetus or embryo before it can survive outside the uterus.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Abortion|MedDRA:10000210|MESH:D000028|ICD10:O06|ICD10:O04,,,,,,,,,,,,,,,,,,,,,,,,,loss of pregnancy,,,,efo:EFO_1001491,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,abortion,,,,,,,,,,,,,,,,,,,,,,,,,,,,Sirarat Sarntivijai,,,,the ending of pregnancy by removing a fetus or embryo before it can survive outside the uterus.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000088,beef flat iron steak (raw),,A raw beef flat iron steak.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000088,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef flat iron steak (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef flat iron steak.,,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000417,pretest probability,,The probability of a patient having the target disorder before a diagnostic test result is known,FALSE,,,,,,,,,,,,,,,,,,,,,http://www.cebm.net/pre-test-probability/,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000417,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,pretest probability,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra,,,,The probability of a patient having the target disorder before a diagnostic test result is known,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0557,Costa Rican founder,,"Individuals who have at least six great-grandparents born in the Central Valley of Costa Rica, to ensure descent from the founder population, composed primarily of Europeans and Native Americans",FALSE,,,,,,,,,,,,,,,,,,,,,PMID:25584925,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0557,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Costa Rican founder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Individuals who have at least six great-grandparents born in the Central Valley of Costa Rica, to ensure descent from the founder population, composed primarily of Europeans and Native Americans",,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0556,Cilento,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0556,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Cilento,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0550,Zimbabweian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0550,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Zimbabweian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0552,Aboriginal Australian ancestry,Aboriginal Australian,Includes individuals who either self-report or have been described by authors as Australian Aboriginal. These are expected to be descendents of early human migration into Australia from Eastern Asia and can be distinguished from other Asian populations by mtDNA and Y chromosome variation.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Aboriginal Australian,,,,HANCESTRO:0552,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Aboriginal Australian ancestry,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Includes individuals who either self-report or have been described by authors as Australian Aboriginal. These are expected to be descendents of early human migration into Australia from Eastern Asia and can be distinguished from other Asian populations by mtDNA and Y chromosome variation.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0558,French Canadian founder,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0558,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,French Canadian founder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0555,Arab Israeli founder,Israeli Arab,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Israeli Arab,,,,HANCESTRO:0555,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Arab Israeli founder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0554,Silk Road founder,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0554,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Silk Road founder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0559,Italian founder,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0559,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Italian founder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0551,genetically homogenous Irish,Irish founder,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Irish founder,,,,HANCESTRO:0551,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,genetically homogenous Irish,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020020,"animal breast (skinless, boneless, raw)",,"A raw, skinless and boneless animal breast.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020020,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"animal breast (skinless, boneless, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A raw, skinless and boneless animal breast.",,,,,,,,
http://purl.obolibrary.org/obo/OBI_0002001,Illumina HiSeq 2000,,"A DNA sequencer which is manufactured by the Illumina corporation, with two flow cells and a throughput of up to 55 Gb per day. Built upon sequencing by synthesis technology, the machine is optimized for generation of data for multiple samples in a single run.",FALSE,,,,,,,HiSeq 2000,,,,,,,,,,,,,,http://res.illumina.com/documents/products/datasheets/datasheet_hiseq_systems.pdf,,,,,Illumina HiSeq 2000,,"Wang J, Qi J, Zhao H, He S, Zhang Y, Wei S, Zhao F. Metagenomic sequencing reveals microbiota and its functional potential associated with periodontal disease. Sci Rep. 2013 May;3:1843. PMID:23673380",,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0002001,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Illumina HiSeq 2000,,,,,,,,,,,,,,,,,,,,,,,,,,,,"PERSON: Venkat Malladi, Chris Stoeckert, Jie Zheng",,,,"A DNA sequencer which is manufactured by the Illumina corporation, with two flow cells and a throughput of up to 55 Gb per day. Built upon sequencing by synthesis technology, the machine is optimized for generation of data for multiple samples in a single run.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000010,other relevance,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000010,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,other relevance,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0000376,respiratory system cancer,respiratory system cancer|malignant respiratory system neoplasm|malignant neoplasm of respiratory system|cancer of respiratory system,A malignant neoplasm involving the respiratory system,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,icd11.foundation:401100796|UMLS:C3164456|SCTID:449096009|NCIT:C4571|MEDGEN:756863|ICD9:165.9|ICD9:165.8|ICD10CM:C34|DOID:0050615,,,,,,,,,,,,,,,,,,,,,,,,,respiratory system cancer|malignant respiratory system neoplasm|malignant neoplasm of respiratory system|cancer of respiratory system,,,,MONDO:0000376,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,respiratory system cancer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A malignant neoplasm involving the respiratory system,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001431,exposure details,exposure details,A data field which describes additional host exposure information.,FALSE,,,,,,,PCDS:exposure_details,,,,,,,PCDS: Free text description of the exposure.,,,,,,,,,,,,,,"PCDS: Large party, many contacts",,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,exposure details,exposure details slot,,,,GENEPIO:0001431,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,exposure details,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes additional host exposure information.,,PCDS: Additional host exposure information.,,,,,,
http://purl.obolibrary.org/obo/OBA_2040155,age of onset of stroke disorder,age stroke disorder symptoms begin|age at onset of stroke disorder,The age at which stroke disorder manifestations first appear.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,age stroke disorder symptoms begin|age at onset of stroke disorder,,,,OBA:2040155,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age of onset of stroke disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The age at which stroke disorder manifestations first appear.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00003651,"populated place, Switzerland",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00003651,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Switzerland",http://purl.obolibrary.org/obo/GAZ_00002941,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002028,mapping (reference based),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002028,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,mapping (reference based),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HP_0031179,Nuchal rigidity,,"Resistance of the extensor muscles of the neck to being bent forwards (i.e., impaired neck flexion) as a result of muscle spasm of the extensor muscles of the neck. Nuchal rigidity is not a fixed rigidity. Nuchal rigidity has been used as a bedside test for meningism, although its sensitivity for this purpose has been debated.",FALSE,,,,,,,,,,,,,,"Meningism is resistance to neck flexion due to painful spasm of extensor muscles resulting from meningeal irritation. The diagnosis of meningism is made in someone whose symptoms simulate meningitis, but in which no actual inflammation of these membranes is present. Nuchal rigidity can thus be observed in individuals with meningitis or with meningism.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0031179,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Nuchal rigidity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Resistance of the extensor muscles of the neck to being bent forwards (i.e., impaired neck flexion) as a result of muscle spasm of the extensor muscles of the neck. Nuchal rigidity is not a fixed rigidity. Nuchal rigidity has been used as a bedside test for meningism, although its sensitivity for this purpose has been debated.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000309,New York roast (boneless),,A boneless roast that is derived from the center-cut top loin.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000309,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,New York roast (boneless),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A boneless roast that is derived from the center-cut top loin.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C36284,Reproductive System Finding,Reproductive System Finding|REPRODUCTIVE SYSTEM,"Symptoms, physical examination results, and/or laboratory test results related to the reproductive system.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Reproductive System Finding|REPRODUCTIVE SYSTEM,,,,NCIT:C36284,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Reproductive System Finding,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Symptoms, physical examination results, and/or laboratory test results related to the reproductive system.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510110,preservative-related claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0110,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510110,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,preservative-related claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_0050584,gummatous syphilis,,"A tertiary syphilis that is characterized by granulomatous lesions, called gummas, which are characterized by a center of necrotic tissue with a rubbery texture. They form in the liver, bones, and testes but may affect any organ.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0050584,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,gummatous syphilis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A tertiary syphilis that is characterized by granulomatous lesions, called gummas, which are characterized by a center of necrotic tissue with a rubbery texture. They form in the liver, bones, and testes but may affect any organ.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_0050589,inflammatory bowel disease,,An intestinal disease characterized by inflammation located in all parts of digestive tract.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:0050589,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,inflammatory bowel disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An intestinal disease characterized by inflammation located in all parts of digestive tract.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02021292,piece of veal,,A severed part of a veal.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02021292,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of veal,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A severed part of a veal.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_2001427,anterior naris,anterior nostril,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ZFA:0001427,,,,,,,,,,,,,,,,,,,,,,,,,anterior nostril,,,,UBERON:2001427,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,anterior naris,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510181,reduced sugars food,,Food having at least 25% less sugars per amount customarily consumed than the sugars content of a comparable food product.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0181,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510181,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,reduced sugars food,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Food having at least 25% less sugars per amount customarily consumed than the sugars content of a comparable food product.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C25741,Physician,physician|Physician|PHYSICIAN|Medical Doctors|Medical Doctor|Doctor|DR,"A doctor; a person who has been educated, trained, and licensed to practice the art and science of medicine; a practitioner of medicine, as contrasted with a surgeon.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,physician|Physician|PHYSICIAN|Medical Doctors|Medical Doctor|Doctor|DR,,,,NCIT:C25741,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Physician,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A doctor; a person who has been educated, trained, and licensed to practice the art and science of medicine; a practitioner of medicine, as contrasted with a surgeon.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0008785,upper limb segment,subdivision of free upper limb|segment of free upper limb|free upper limb subdivision|free upper limb segment,A limb segment that is part of a forelimb.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:24876,,,,,,,,,,,,,,,,,,,,,,,,,subdivision of free upper limb|segment of free upper limb|free upper limb subdivision|free upper limb segment,,,,UBERON:0008785,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,upper limb segment,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A limb segment that is part of a forelimb.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C74944,Clinical Pathology Procedure,Clinical Pathology Procedure,"A laboratory procedure that involves the examination of blood, urine, other fluids, and stool for diagnostic or research purposes.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Clinical Pathology Procedure,,,,NCIT:C74944,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Clinical Pathology Procedure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A laboratory procedure that involves the examination of blood, urine, other fluids, and stool for diagnostic or research purposes.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000185,beef hanger steak,,A beef steak that is a thick strip of meat located on the underside of the carcass and hangs between the last rib and the loin.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000185,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef hanger steak,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A beef steak that is a thick strip of meat located on the underside of the carcass and hangs between the last rib and the loin.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C116518,Other Intervention or Procedure,Other Intervention or Procedure,Interventions or procedures not otherwise categorized.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Other Intervention or Procedure,,,,NCIT:C116518,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Other Intervention or Procedure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Interventions or procedures not otherwise categorized.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020210,"piece of chicken meat (with skin, raw)",,A raw piece of chicken meat that contains skin.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020210,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"piece of chicken meat (with skin, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw piece of chicken meat that contains skin.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100261,kitchen worker role,,A role inhering in a person that is realized when the bearer is an employee that performs labor in a kitchen.,FALSE,,,,,,,Kitchen Worker,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100261,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,kitchen worker role,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A role inhering in a person that is realized when the bearer is an employee that performs labor in a kitchen.,,,,,,,,
http://purl.obolibrary.org/obo/CL_0000578,experimentally modified cell in vitro,,A cell in vitro that has undergone physical changes as a consequence of a deliberate and specific experimental procedure.,FALSE,,,,,,,,,,,,,,"This class has been re-labeled to imply reference only to in vitro experimentally modified cells, similarly, the definition has been slightly updated to reflect this. 'experimentally modified cell' refers only to cells in vitro, and not modified in vivo/in environment cells. There is currently no class representing unmodified in vitro cells (other than the parent 'cell in vitro'), or a class representing modified native cells. More granular subclassing of experimentally modified cell can be found in ReO. MHB 1.12.12",,,,,,,,,,,,experimentally modified cell in vitro,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CL:0000578,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/clo.owl,,,,,,,,,experimentally modified cell in vitro,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A cell in vitro that has undergone physical changes as a consequence of a deliberate and specific experimental procedure.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00002635,Kingdom of Denmark,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,INSDC:country:denmark,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00002635,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Kingdom of Denmark,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100709,dissolved oxygen measurement characterization tag,dissolved oxygen measurement characterization data tag,A chemical characterization data tag which indicates the presence of data that describes a measurement of dissolved oxygen.,FALSE,,,,,,,dissolved oxygen measurement,,,,,,,Example Guidance: Use this tag to indicate additional data is available that provides characterization information from the amount of oxygen that is present in water.,,,,,,,,,,,"https://www.epa.gov/national-aquatic-resource-surveys/indicators-dissolved-oxygen used as a partial source for the ""Example Guidance"".",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,dissolved oxygen measurement characterization data tag,,,,GENEPIO:0100709,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-05-18T19:08:34.869Z,,,,,,,,,,,,,,,,,,,dissolved oxygen measurement characterization tag,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A chemical characterization data tag which indicates the presence of data that describes a measurement of dissolved oxygen.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020982,"beef chop (boneless, raw)",,A raw and boneless beef chop.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020982,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"beef chop (boneless, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw and boneless beef chop.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03430106,finely ground,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=E0106,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03430106,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,finely ground,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C21173,Reproductive Process,Reproductive System Process|Reproductive Process,"A Reproductive System Process involves a function of cellular, cell, or tissue components of the organ system involved in generation of offspring that includes the ovaries, fallopian tubes, uterus, cervix, and vagina in women or the prostate, testes, and penis in men.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Reproductive System Process|Reproductive Process,,,,NCIT:C21173,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Reproductive Process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A Reproductive System Process involves a function of cellular, cell, or tissue components of the organ system involved in generation of offspring that includes the ovaries, fallopian tubes, uterus, cervix, and vagina in women or the prostate, testes, and penis in men.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001619,not applicable,,A categorical choice recorded when a measurable datum does not apply to a given context.,FALSE,,,,,,,,,,,,,,,,,,,,,https://ena-docs.readthedocs.io/en/latest/submit/samples/missing-values.html,,,,,,,'not applicable' is an appropriate value for the measure of femur length for a patient with a missing limb,,,http://purl.obolibrary.org/obo/IAO_0000428,http://purl.obolibrary.org/obo/GENEPIO_0001835|http://purl.obolibrary.org/obo/GENEPIO_0001666,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001619,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,not applicable,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,INSDC term (top level),,A categorical choice recorded when a measurable datum does not apply to a given context.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001036,treatment end date,,A treatment end date is a date/time datum which indicates the end of a particular medical treatment for a patient.,FALSE,,,,,http://purl.obolibrary.org/obo/GENEPIO_0001025,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001036,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,treatment end date,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A treatment end date is a date/time datum which indicates the end of a particular medical treatment for a patient.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C105370,Bacterial 16S RNA,Bacterial 16S rRNA|Bacterial 16S Ribosomal RNA|Bacterial 16S RNA|16S rRNA|16S Ribosomal RNA,The RNA component of the small (30S) subunit of prokaryotic ribosomes.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley's note: this term was mistakenly placed in a list of GenEpiO diagnostic tests; in fact it references a material entity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Bacterial 16S rRNA|Bacterial 16S Ribosomal RNA|Bacterial 16S RNA|16S rRNA|16S Ribosomal RNA,,,,NCIT:C105370,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Bacterial 16S RNA,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The RNA component of the small (30S) subunit of prokaryotic ribosomes.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0008001,irregular bone,os irregulare,"The irregular bones are bones which, from their peculiar form, cannot be grouped as long bone, short bone, flat bone or sesamoid bone. Irregular bones serve various purposes in the body, such as protection of nervous tissue, affording multiple anchor points for skeletal muscle attachment (as with the sacrum), and maintaining pharynx and trachea support, and tongue attachment (such as the hyoid bone). They consist of cancellous tissue enclosed within a thin layer of compact bone. The irregular bones are: the vertebrC&, sacrum, coccyx, temporal, sphenoid, ethmoid, zygomatic, maxilla, mandible, palatine, inferior nasal concha, and hyoid.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Irregular_bone|UMLS:C0502414|SCTID:421560006|NCIT:C32881|FMA:7477,,,,,,,,,,,,,,,,,,,,,,,,,os irregulare,,,,UBERON:0008001,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,irregular bone,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The irregular bones are bones which, from their peculiar form, cannot be grouped as long bone, short bone, flat bone or sesamoid bone. Irregular bones serve various purposes in the body, such as protection of nervous tissue, affording multiple anchor points for skeletal muscle attachment (as with the sacrum), and maintaining pharynx and trachea support, and tongue attachment (such as the hyoid bone). They consist of cancellous tissue enclosed within a thin layer of compact bone. The irregular bones are: the vertebrC&, sacrum, coccyx, temporal, sphenoid, ethmoid, zygomatic, maxilla, mandible, palatine, inferior nasal concha, and hyoid.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000119,Darwin Core Terms,,"The Darwin Core is body of standards. It includes a glossary of terms (in other contexts these might be called properties, elements, fields, columns, attributes, or concepts) intended to facilitate the sharing of information about biological diversity by providing reference definitions, examples, and commentaries.",FALSE,,,,,,,,,,,,,,,,,,,,,http://tdwg.github.io/dwc/terms/index.htm,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000119,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Darwin Core Terms,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"The Darwin Core is body of standards. It includes a glossary of terms (in other contexts these might be called properties, elements, fields, columns, attributes, or concepts) intended to facilitate the sharing of information about biological diversity by providing reference definitions, examples, and commentaries.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530040,"jowl, trimmed",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0040,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530040,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"jowl, trimmed",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001730,unknown source,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001730,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,unknown source,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001919,number,,Number types can have min / max limits for validation.  Regular expressions would be used mostly for data entry transformation and display.,FALSE,,,,,,,,,,,,,,Number types can have min / max limits for validation.  Regular expressions would be used mostly for data entry transformation and display.,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001919,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,number,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470146,preservation by adding sugar,,"Preservation by adding sugar, sugar syrup or by partial inversion of disaccharides until the sugar concentration is high enough to prevent growth of microorganisms.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0146,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470146,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,preservation by adding sugar,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Preservation by adding sugar, sugar syrup or by partial inversion of disaccharides until the sugar concentration is high enough to prevent growth of microorganisms.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001924,Complete Genomics platform,,"Damion Dooley's note: This platform is in-house and not a product per se. Complete Genomics states: ""Complete Genomics’ sequencing platform employs high-density DNA nanoarrays that are populated with DNA nanoballs (DNBs™). Base identification is performed using an unchained ligation-based read technology known as combinatorial probe-anchor ligation (cPAL™). The sequencing instrumentation is custom-developed to support this process. Details are described in our Science publication  (Drmanac et al., 2010).""",FALSE,,,,,,,,,,,,,,"Damion Dooley's note: This platform is in-house and not a product per se. Complete Genomics states: ""Complete Genomics’ sequencing platform employs high-density DNA nanoarrays that are populated with DNA nanoballs (DNBs™). Base identification is performed using an unchained ligation-based read technology known as combinatorial probe-anchor ligation (cPAL™). The sequencing instrumentation is custom-developed to support this process. Details are described in our Science publication  (Drmanac et al., 2010).""",,,,,,,,,,,,,,,,,,NCBI SRA: COMPLETE_GENOMICS,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001924,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Complete Genomics platform,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000016,beef top round steak (boneless),,A boneless beef top round steak.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000016,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef top round steak (boneless),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A boneless beef top round steak.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001953,MNase method,,Micrococcal Nuclease (MNase) digestion,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI SRA: MNase,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001953,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MNase method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Micrococcal Nuclease (MNase) digestion,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C15327,Lumbar Puncture,spinal tap|lumbar puncture|Spinal Tap|Lumbar Puncture|LP,An invasive procedure in which a hollow needle is introduced through an intervertebral space in the lower back to access the subarachnoid space in order to sample cerebrospinal fluid or to administer medication.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,spinal tap|lumbar puncture|Spinal Tap|Lumbar Puncture|LP,,,,NCIT:C15327,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Lumbar Puncture,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An invasive procedure in which a hollow needle is introduced through an intervertebral space in the lower back to access the subarachnoid space in order to sample cerebrospinal fluid or to administer medication.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000317,pork leg center slice,,A slice that is derived from a whole pork leg.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000317,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pork leg center slice,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A slice that is derived from a whole pork leg.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000080,sequencing count of chemistry cycles,,Number of sequencing chemistry cycles,FALSE,,,,,,,,,,,,,,,,,,,,,GROUP: IRIDA Ontology (Emma),,,,,,,500,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000080,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,,,,,,,sequencing count of chemistry cycles,,,,,Sequencing,,,,,,,,,,,,,,,,,,,,,,Number of cycles,,,Derived from Illumina Sample Sheet,,Number of sequencing chemistry cycles,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_59132,antigen,,"Any substance that stimulates an immune response in the body, such as through antibody production or by presentation to a T-cell receptor after binding to a major histocompability complex (MHC).",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Currently ""K antigen"" is a CHEBI_73772 chemical entity rather than a role.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:59132,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,antigen,,,,,,,,,,,,,,,,,,,,,,K antigen,,,,,,,,,,"Any substance that stimulates an immune response in the body, such as through antibody production or by presentation to a T-cell receptor after binding to a major histocompability complex (MHC).",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_86478,antibiotic antifungal agent,,Heteroorganic entities that are microbial metabolites (or compounds derived from them) which have significant antifungal properties.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:86478,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,antibiotic antifungal agent,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Heteroorganic entities that are microbial metabolites (or compounds derived from them) which have significant antifungal properties.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000038,soluble inorganic material concentration,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000038,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,,,,,,,soluble inorganic material concentration,,,,,Environmental Isolate,,,,,,,,,,,,,,,,,,,,,,Soluble inorganic material,,,GROUP: MIxS,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0000115,lung epithelium,lung epithelial tissue|epithelium of lung|epithelial tissue of lung,The epithelial layer of the lung.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MA:0001783|EMAPA:32860|BTO:0001653,,,,,,,,,,,,,,,,,,,,,,,,,lung epithelial tissue|epithelium of lung|epithelial tissue of lung,,,,UBERON:0000115,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,lung epithelium,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The epithelial layer of the lung.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0000117,respiratory tube,tracheobronchial tree segment|segment of tracheobronchial tree|respiratory conducting tube,"A tube in the respiratory system. Examples: bronchus, bronchiole, trachea.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:12224|EMAPA:37946,,,,,,,,,,,,,,,,,,,,,,,,,segment of tracheobronchial tree,tracheobronchial tree segment|segment of tracheobronchial tree|respiratory conducting tube,,,UBERON:0000117,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,respiratory tube,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A tube in the respiratory system. Examples: bronchus, bronchiole, trachea.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002175,specimen from organism specification,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Damion Dooley note: OBI has a variety of subclasses like ""blood specimen"" and ""colon specimen"" etc. which we have not added here. The are mapped to UBERON terms indirectly through the logic ""derives from some [uberon term]"".  GenEpiO takes a different approach in describing this class with  lists for ""subject anatomical site"", ""subject body product"", and ""plant anatomy"".",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002175,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/OBI_0001479,,,,,,specimen from organism specification,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://www.ebi.ac.uk/efo/EFO_0005056,age at death,,The age at which death occurs.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,efo:EFO_0005056,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age at death,,,,,,,,,,,,,,,,,,,,,,,,,,,,Dani Welter,,,,The age at which death occurs.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C13235,Fetus,fetus|Fetus|Fetal|FETUS,An unborn or unhatched vertebrate in the later stages of development showing the main recognizable features of the mature being.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,fetus|Fetus|Fetal|FETUS,,,,NCIT:C13235,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Fetus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An unborn or unhatched vertebrate in the later stages of development showing the main recognizable features of the mature being.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C17627,Swab,Swab|SWAB,A tuft of material on the end of a stick for applying solutions and suspensions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,Swab|SWAB,,,,NCIT:C17627,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Swab,,,,,,,,,,,,,,,,,,,,,,,,,,,,Emma Griffiths,,,,A tuft of material on the end of a stick for applying solutions and suspensions,,A portion of an absorbent material attached to one end of a small stick for the purpose of applying or collecting material.,,,,,,
http://semanticscience.org/resource/SIO_000511,line,,"A line is curve that extends in a single dimension (e.g. straight line; exhibits no curvature), and is composed of at least two fully connected points.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,resource:SIO_000511,,,,,,,,,,,,,,,,,,,,,,,,http://semanticscience.org/resource/SIO_000511,,,,,,,,,line,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A line is curve that extends in a single dimension (e.g. straight line; exhibits no curvature), and is composed of at least two fully connected points.",,,,,,,,
http://purl.obolibrary.org/obo/OBI_0001896,investigation assay specification,,A plan specification which indicates the assay type used to obtain data.,FALSE,,,,,,,,,,,,,,,,,,,,,NIAID GSCID-BRC metadata working group,,,,,investigation assay specification,,"Some examples of Project Method are Sequence, Array, Mass Spectrometry",,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0001896,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/OBI_0000070,,,,,,investigation assay specification,,,,,,,Project Method,,,,,,,,,,,,,,,,,,,,,"PERSON: Chris Stoeckert, Jie Zheng",,,,A plan specification which indicates the assay type used to obtain data.,,,,project method,,,,
http://purl.obolibrary.org/obo/FOODON_03470132,food quick freezing,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0132,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470132,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food quick freezing,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100523,AMR measurement units,antimicrobial resistance measurement units|AMR_measurement_units|AMR measurement units,A data field which describes the units of the antimicrobial resistance (AMR) measurement.,FALSE,,,,,,,PCDS:amr_measurement_units|PCDS:*_measurement_units,,,,,,,PCDS: Select the units from the pick list provided. Use the Term Request System to request the addition of other units if necessary.,,,,,,,,,,,Dependent on the numerical value specified in the 'AMR measurement field' [GENEPIO:0100522],,,PCDS: ug/mL [UO:0000274],,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,antimicrobial resistance measurement units|AMR_measurement_units|AMR measurement units,antimicrobial resistance measurement units slot|antimicrobial resistance measurement units field|AMR measurement units slot,,,,GENEPIO:0100523,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-12-22T00:55:53.808Z,,,,,,,,,,,,,,,,,,,AMR measurement units,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the units of the antimicrobial resistance (AMR) measurement.,,PCDS: The units of the antimicrobial resistance measurement.,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000100,beef blade chuck steak (raw),,A raw beef blade chuck steak.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000100,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef blade chuck steak (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef blade chuck steak.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001638,draft GenEpiO general information record,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001638,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,draft GenEpiO general information record,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C25218,Clinical Intervention or Procedure,treatment_type|treatment type|study intervention|procedure|interventionDescription|intervention|Procedure|Interventional Procedure Type|Interventional|Intervention or Procedure|Intervention Strategies|Intervention|Clinical Intervention or Procedure,"An activity that produces an effect, or that is intended to alter the course of a disease in a patient or population. This is a general term that encompasses the medical, social, behavioral, and environmental acts that can have preventive, therapeutic, or palliative effects.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,treatment_type|treatment type|study intervention|procedure|interventionDescription|intervention|Procedure|Interventional Procedure Type|Interventional|Intervention or Procedure|Intervention Strategies|Intervention|Clinical Intervention or Procedure,,,,NCIT:C25218,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Clinical Intervention or Procedure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An activity that produces an effect, or that is intended to alter the course of a disease in a patient or population. This is a general term that encompasses the medical, social, behavioral, and environmental acts that can have preventive, therapeutic, or palliative effects.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001775,subject age at time of specimen collection,,A subject age at time of specimen extraction is the age (since birth) of the organism at the time a given specimen was extracted.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001775,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,subject age at time of specimen collection,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A subject age at time of specimen extraction is the age (since birth) of the organism at the time a given specimen was extracted.,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000278,Kanuri,,"A Nilotic Central, Nilotic Western population with a population size of >10 millions",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000278,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Kanuri,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A Nilotic Central, Nilotic Western population with a population size of >10 millions",,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000276,Southern African,,People living in: Botswana OR Eswatini OR Lesotho OR Namibia OR South Africa,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000276,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Southern African,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,People living in: Botswana OR Eswatini OR Lesotho OR Namibia OR South Africa,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000275,Northern African,,People living in: Algeria OR Egypt OR Libya OR Mauritania OR Morocco OR Tunisia OR Western Sahara,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000275,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Northern African,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,People living in: Algeria OR Egypt OR Libya OR Mauritania OR Morocco OR Tunisia OR Western Sahara,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000274,Central African,,People living in: Angola OR Cameroon OR Central African Republic OR Chad OR Congo OR Democratic Republic of the Congo OR Gabon OR Zambia,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000274,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Central African,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,People living in: Angola OR Cameroon OR Central African Republic OR Chad OR Congo OR Democratic Republic of the Congo OR Gabon OR Zambia,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000271,Sudanic,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000271,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Sudanic,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000277,Western African,,People living in: Benin OR Burkina Faso OR Cabo Verde OR Cote d'Ivoire OR Equatorial Guinea OR Gambia OR Ghana OR Guinea OR Guinea-Bissau OR Liberia OR Mali OR Niger OR Nigeria OR Saint Helena OR Sao Tome and Principe OR Senegal OR Sierra Leone OR Togo,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000277,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Western African,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,People living in: Benin OR Burkina Faso OR Cabo Verde OR Cote d'Ivoire OR Equatorial Guinea OR Gambia OR Ghana OR Guinea OR Guinea-Bissau OR Liberia OR Mali OR Niger OR Nigeria OR Saint Helena OR Sao Tome and Principe OR Senegal OR Sierra Leone OR Togo,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000279,Kotoko,,A Central African population with a population size of < 1 million,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000279,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Kotoko,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Central African population with a population size of < 1 million,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000270,Nilotic Western,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000270,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Nilotic Western,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000273,Bantu Central,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000273,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Bantu Central,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ARO_3004305,multidrug resistance antimicrobial phenotype,MDRO,"Multidrug-resistant organisms are defined as bacterial strains that have become resistant to multiple classes of antibacterial drugs or other agents. The phenotype of these organisms is defined by the spectrum of antibiotic drug classes to which that organism is resistant. Often, these organisms are susceptible to a narrow range of available drugs, making treatment difficult and urgent.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,MDRO,,,,ARO:3004305,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/aro.owl,,,,,,,,,multidrug resistance antimicrobial phenotype,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Multidrug-resistant organisms are defined as bacterial strains that have become resistant to multiple classes of antibacterial drugs or other agents. The phenotype of these organisms is defined by the spectrum of antibiotic drug classes to which that organism is resistant. Often, these organisms are susceptible to a narrow range of available drugs, making treatment difficult and urgent.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03480043,packed in cream or milk,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=K0043,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03480043,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,packed in cream or milk,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C17357,Gender,gender|Gender,"Characteristics of people that are socially constructed, including norms, behaviors, and roles based on sex. As a social construct, gender varies from society to society and can change over time. (Adapted from WHO.)",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,gender|Gender,,,,NCIT:C17357,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Gender,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Characteristics of people that are socially constructed, including norms, behaviors, and roles based on sex. As a social construct, gender varies from society to society and can change over time. (Adapted from WHO.)",,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0024881,secondary malignant neoplasm,secondary malignant neoplasm|secondary malignancy|secondary cancer,"A malignant neoplasm that arises from a pre-existing lower grade lesion, or as a result of a primary lesion that has spread to secondary sites, or due to a complication of a cancer treatment.",FALSE,,,,,,,,,,,,,,"Note that we currently treat secondary neoplasms as being neoplastic diseases that are derived from neoplasm; classes such as 'neoplasm', 'carcinoma' are implicitly primary. This may change in future.",,,,,,,,,,,,,,,,,,UMLS:C3266877|SCTID:128462008|NCIT:C4968|MEDGEN:473807|ICD9:199.1|ICD9:198.89|EFO:0009812,,,,,,,,,,,,,,,,,,,,,,,,,secondary malignant neoplasm|secondary malignancy|secondary cancer,,,,MONDO:0024881,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,secondary malignant neoplasm,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A malignant neoplasm that arises from a pre-existing lower grade lesion, or as a result of a primary lesion that has spread to secondary sites, or due to a complication of a cancer treatment.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490278,"glass container, coloured",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0278,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490278,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"glass container, coloured",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0037494,paracardial gastric lymph node,paracardial lymph node|paracardial gastric node|lymph node ring of cardia of stomach|aJCC level 16,Gastric lymph node located around the cardia of stomach.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:12803,,,,,,,,,,,,,,,,,,,,,,,,,paracardial lymph node|paracardial gastric node|lymph node ring of cardia of stomach|aJCC level 16,,,,UBERON:0037494,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,paracardial gastric lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Gastric lymph node located around the cardia of stomach.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001479,r2 fastq filepath,r2 fastq filepath,A data field which describes the filepath of the read 2 (r2) FASTQ file.,FALSE,,,,,,,PCDS:r2_fastq_filepath,,,,,,,PCDS: Provide the filepath of the r2 FASTQ file.,,,,,,,,,,,,,,PCDS: /User/Documents/RespLab/Data/ABC123_S1_L001_R2_001.fastq.gz,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,r2 fastq filepath,r2 fastq filepath slot,,,,GENEPIO:0001479,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,r2 fastq filepath,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the filepath of the read 2 (r2) FASTQ file.,,PCDS: The filepath of the r2 FASTQ file.,,,,,,
http://purl.obolibrary.org/obo/GAZ_00002648,"populated place, Metropolitan Spain",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00002648,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Metropolitan Spain",http://purl.obolibrary.org/obo/GAZ_00003936,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02021237,butchery cut of lamb,,A piece of lamb meat which has been cut according to butchery practice.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02021237,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,butchery cut of lamb,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A piece of lamb meat which has been cut according to butchery practice.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_22562,anilines,,Any  aromatic amine that is benzene carrying at least one amino substituent and its substituted derivatives.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:22562,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,anilines,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any  aromatic amine that is benzene carrying at least one amino substituent and its substituted derivatives.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001876,datetime range item,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001876,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,datetime range item,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001883,entity history item,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001883,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,entity history item,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000172,beef sirloin bavette flap (raw),,A raw beef sirloin bavette flap cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000172,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef sirloin bavette flap (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef sirloin bavette flap cut.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C49641,In Utero,In Utero,The period of time during which the embryo or fetus is present in the uterus of the female. Also describes the location of the embryo or fetus as being in the uterus in contrast to outside the uterus (ex utero).,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,In Utero,,,,NCIT:C49641,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,In Utero,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The period of time during which the embryo or fetus is present in the uterus of the female. Also describes the location of the embryo or fetus as being in the uterus in contrast to outside the uterus (ex utero).,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_59769,acetal,,"An organooxygen compound having the structure RR'C(OR'')(OR''') (R'', R''' ≠ H). Mixed acetals have R'' and R''' groups which differ.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:59769,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,acetal,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An organooxygen compound having the structure RR'C(OR'')(OR''') (R'', R''' ≠ H). Mixed acetals have R'' and R''' groups which differ.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001065,travel reason,,A travel reason is a motivation for traveling on a particular trip expressed by the traveller.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001065,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,travel reason,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A travel reason is a motivation for traveling on a particular trip expressed by the traveller.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001537,person role,,A role which inheres in a person and is realized by the process of being in the context of civilization,FALSE,,,,,,,,,,,,,http://purl.obolibrary.org/obo/NCBITaxon_9606,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001537,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,person role,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A role which inheres in a person and is realized by the process of being in the context of civilization,,,,,,,,
http://purl.obolibrary.org/obo/DOID_2945,severe acute respiratory syndrome,,"A Coronavirus infectious disease that results_in infection located_in respiratory tract, has_material_basis_in Severe acute respiratory syndrome coronavirus (SARS-CoV or SARS-CoV-1), a subtype of Betacoronavirus pandemicum, which is transmitted_by droplet spread of respiratory secretions, transmitted_by ingestion of contaminated food, or transmitted_by fomites. The infection has_symptom fever, has_symptom headache, has_symptom body aches, has_symptom dry cough, and has_symptom hypoxia.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:2945,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,severe acute respiratory syndrome,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A Coronavirus infectious disease that results_in infection located_in respiratory tract, has_material_basis_in Severe acute respiratory syndrome coronavirus (SARS-CoV or SARS-CoV-1), a subtype of Betacoronavirus pandemicum, which is transmitted_by droplet spread of respiratory secretions, transmitted_by ingestion of contaminated food, or transmitted_by fomites. The infection has_symptom fever, has_symptom headache, has_symptom body aches, has_symptom dry cough, and has_symptom hypoxia.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002014,TB lineage 6 - West African 2,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002014,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,TB lineage 6 - West African 2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_35727,triazoles,,An azole in which the five-membered heterocyclic aromatic skeleton contains three N atoms and two C atoms.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:35727,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,triazoles,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An azole in which the five-membered heterocyclic aromatic skeleton contains three N atoms and two C atoms.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530122,quartier avant,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530122,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,quartier avant,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00005402,lamb chump (raw),,A raw lamb chump cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00005402,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lamb chump (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw lamb chump cut.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0011042,Abnormal circulating potassium concentration,Abnormality of potassium homeostasis|Abnormal blood potassium concentration|Abnormal blood K concentration,An abnormal concentration of potassium.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4023575,,,,,,,,,,,,,,,,,,,,,,,,,Abnormality of potassium homeostasis|Abnormal blood potassium concentration|Abnormal blood K concentration,,,,HP:0011042,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal circulating potassium concentration,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An abnormal concentration of potassium.,,,,,,,,
http://purl.obolibrary.org/obo/APOLLO_SV_00000115,infection acquisition,,The biological process of pathogen organism(s) of a particular biological taxon entering (the tissues of the body of) a host organism of another taxon from a contagious host or a contaminated thing and reproducing using host resources.,FALSE,,,,,,,,,,,,,,"Cannot acquire from colonized host directly - contamination results from colonized or contaminated thing and new host picks it up from contaminated thing.|Apollo-SV defines infection acquisition rather than infection transmission, which is the direction of movement of a pathogen in current use.  The Apollo-SV conceptualization is simpler when accounting for infections acquired from contaminated things.
The likelihood of acquisition is expressed by parameters such as the basic reproduction rate and transmission coefficient.   
An infection is acquired from an infectious organism or a contaminated thing.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,APOLLO_SV:00000115,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/apollo_sv.owl,,,,,,,,,infection acquisition,,,,,,,,,,,,,,,,,,,,,,,,,,,,Mathias Brochhausen,,,,The biological process of pathogen organism(s) of a particular biological taxon entering (the tissues of the body of) a host organism of another taxon from a contagious host or a contaminated thing and reproducing using host resources.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02010058,animal organ (raw),,A raw animal organ that is obtained from an animal during a butchery process.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02010058,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,animal organ (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw animal organ that is obtained from an animal during a butchery process.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001622,draft GenEpiO isolate testing model,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001622,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,draft GenEpiO isolate testing model,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HP_5200241,Recurrent maladaptive behavior,,A repeating behavior that is either immediately unproductive or has negative long-term consequences. This includes harmful coping mechanisms such as addictive behavior and failure to control impulses and compulsions.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:5200241,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Recurrent maladaptive behavior,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A repeating behavior that is either immediately unproductive or has negative long-term consequences. This includes harmful coping mechanisms such as addictive behavior and failure to control impulses and compulsions.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002026,stable health trend,,,FALSE,,,,,http://purl.obolibrary.org/obo/GENEPIO_0001853,,,,http://purl.obolibrary.org/obo/GENEPIO_0001550,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002026,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,stable health trend,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0001669,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02010306,butchery cut of animal (raw),,A raw cut of animal meat.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02010306,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,butchery cut of animal (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw cut of animal meat.,,,,,,,,
http://purl.obolibrary.org/obo/APOLLO_SV_00000099,count of resistant population,,The count of individuals in a resistant population (empirical or virtual).,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,APOLLO_SV:00000099,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/apollo_sv.owl,,,,,,,,,count of resistant population,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The count of individuals in a resistant population (empirical or virtual).,,,,,,,,
http://purl.obolibrary.org/obo/APOLLO_SV_00000098,count of contagious population,,The count of individuals in a contagious population (empirical or virtual).,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,APOLLO_SV:00000098,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/apollo_sv.owl,,,,,,,,,count of contagious population,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The count of individuals in a contagious population (empirical or virtual).,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100814,fecal contamination indicator,fecal contamination indicator|faecal contamination indicator,"An environmental data field which describes the gene, virus, bacteria, or substance used to measure the sanitary quality of water in regards to fecal contamination.",FALSE,,,,,,,PCDS:fecal_contamination_indicator,,,,,,,"PCDS: If a fecal contamination indicator was measured, select it from the picklist.",,,,,,,,,,,,,,PCDS: crAssphage,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,fecal contamination indicator|faecal contamination indicator,fecal contamination indicator slot|faecal contamination indicator slot,,,,GENEPIO:0100814,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,fecal contamination indicator,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An environmental data field which describes the gene, virus, bacteria, or substance used to measure the sanitary quality of water in regards to fecal contamination.",,"PCDS: A gene, virus, bacteria, or substance used to measure the sanitary quality of water in regards to fecal contamination.",,,,,,
http://purl.obolibrary.org/obo/UBERON_0037795,right pectoral axillary lymph node,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:232570,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0037795,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,right pectoral axillary lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0037794,left subscapular axillary lymph node,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:232568,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0037794,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,left subscapular axillary lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0037796,left pectoral axillary lymph node,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:232572,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0037796,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,left pectoral axillary lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0037793,right subscapular axillary lymph node,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:232566,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0037793,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,right subscapular axillary lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0037798,left central axillary lymph node,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:232576,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0037798,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,left central axillary lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0037797,right central axillary lymph node,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:232574,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0037797,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,right central axillary lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0037790,left apical axillary lymph node,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:232560,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0037790,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,left apical axillary lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00006935,Commonwealth of Puerto Rico,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00006935,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Commonwealth of Puerto Rico,http://purl.obolibrary.org/obo/GAZ_00003772,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001179,sample received date,sample_received_date|sample received date,A data field which describes the date on which the sample was received.,FALSE,,,,,,,PCDS:sample_received_date,,,,,,,PCDS: ISO 8601 standard 'YYYY-MM-DD'.,,,,,,,,,,,,,,PCDS: 43910,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,sample_received_date|sample received date,sample received date slot,,,,GENEPIO:0001179,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,sample received date,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the date on which the sample was received.,,PCDS: The date on which the sample was received.,,,,,,
http://purl.obolibrary.org/obo/NCIT_C17445,Caregiver,caregiver|Caretaker|Carer|Caregiver|Care Provider|CAREGIVER,"The primary person in charge of the care of a patient, usually a family member or a designated health care professional.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,caregiver|Caretaker|Carer|Caregiver|Care Provider|CAREGIVER,,,,NCIT:C17445,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Caregiver,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The primary person in charge of the care of a patient, usually a family member or a designated health care professional.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00003391,aquaculture production,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00003391,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,aquaculture production,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00002573,beef rump cut (british),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00002573,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef rump cut (british),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/TRANS_0000000,transmission of infection,,"A process that is the means during which the pathogen is transmitted directly or indirectly from its natural reservoir, a susceptible host or source to a new host.",FALSE,,,,,,,,,,,http://purl.obolibrary.org/obo/IDO_0000495,,,"TRANS follows the CDC Epidemiology model of transmission between two hosts, a reservoir and host or other non-host, non-reservoir entities (e.g), a needle and a host.",,,,,,,https://www.ebi.ac.uk/ols/ontologies/trans,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IDO_0000659,,,,,,http://purl.obolibrary.org/obo/OBI_0000925,,,,,,,,,,,,,,,,,,TRANS:0000000,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/trans.owl,,,,,,,,,transmission process|transmission of infection,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A process that is the means during which the pathogen is transmitted directly or indirectly from its natural reservoir, a susceptible host or source to a new host.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100500,sexual partner role,,A role inhering in a person that is realized when the bearer is a sexual partner of the case.,FALSE,,,,,,,Sexual partner of case,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100500,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-01-23T00:42:19.315Z,,,,,,,,,,,,,,,,,,,sexual partner role,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A role inhering in a person that is realized when the bearer is a sexual partner of the case.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00002703,chicken breast,,A whole breast that is obtained from a chicken.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00002703,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,chicken breast,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A whole breast that is obtained from a chicken.,,,,,,,,
http://www.ebi.ac.uk/efo/EFO_0004919,metastasis free survival,metastasis free survival time,The percentage of subjects in a study who have survived without cancer spread for a defined period of time. Usually reported as time since diagnosis or treatment. Can be reported for an individual or a study population.,FALSE,,,,,,,,,,,,,,,,,,,,,www.oncura.net/glossary.php,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,metastasis free survival time,,,,efo:EFO_0004919,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,metastasis free survival,,,,,,,,,,,,,,,,,,,,,,,,,,,,Helen Parkinson,,,,The percentage of subjects in a study who have survived without cancer spread for a defined period of time. Usually reported as time since diagnosis or treatment. Can be reported for an individual or a study population.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0003126,trachea,windpipe|vertebrate trachea|cartilaginous trachea,The trachea is the portion of the airway that attaches to the bronchi as it branches [GO:dph].,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,XAO:0000118|Wikipedia:Vertebrate_trachea|VHOG:0000371|UMLS:C0040578|SCTID:181213009|NCIT:C12428|MIAA:0000137|MESH:D014132|MAT:0000137|MA:0000441|GAID:361|FMA:7394|EV:0100040|EMAPA:16853|EHDAA:3078|EHDAA2:0002066|EFO:0000935|CALOHA:TS-1060|BTO:0001388|AAO:0010140,,,,,,,,,,,,,,,,,,,,,,,,,windpipe|vertebrate trachea|cartilaginous trachea,,,,UBERON:0003126,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,trachea,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The trachea is the portion of the airway that attaches to the bronchi as it branches [GO:dph].,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100604,reference sequence,,A sequence data which is any sequence that is used as a basis for comparison against another sequence.,FALSE,,,,,,,,,,,,,,,,,,,,,Emma Griffiths,,,,,reference sequence,,The reference SARS-CoV-2 genome provided a basis for the design of PCR primers and probes to be utilized in SARS-CoV-2 detection.,,,ready for release,http://purl.obolibrary.org/obo/OBI_0003499,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100604,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,reference sequence,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-1107-9135,,,https://github.com/obi-ontology/obi/issues/1579,A sequence data which is any sequence that is used as a basis for comparison against another sequence.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490335,bleached paper container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0335,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490335,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,bleached paper container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000033,fecal indicator bacteria count,,Number of indicator micro-organisms (colony forming units) present in a sample that have been used to suggest the presence of pathogens.,FALSE,,,,,,,,,,,,,,,,,,,,,URI: http://www.who.int/water_sanitation_health/dwq/iwachap13.pdf,,,,,,,"12,456 cfu",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000033,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,http://purl.obolibrary.org/obo/GENEPIO_0002232,,,,,,fecal indicator bacteria count,,,,,Environmental Isolate,,,,,,,,,,,,,,,,,,,,,,Fecal Indicator Bacteria Number,,,Environment Canada Metadata,,Number of indicator micro-organisms (colony forming units) present in a sample that have been used to suggest the presence of pathogens.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00051067,Arctic Ocean region,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00051067,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Arctic Ocean region,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102067,sample collection url,,"PCDS: If the sample collection has online materials that may be useful for providing context, include the URL associated with the sample collection.",FALSE,,,,,,,PCDS:sample_collection_url,,,,,,,"PCDS: If the sample collection has online materials that may be useful for providing context, include the URL associated with the sample collection.",,,,,,,,,,,,,,PCDS: https://www.jpiamr.eu/projects/b2b2b-amrdx/,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102067,,,,,,,,,,,,,,2026-04-13T17:16:47.336Z,,,,,,,,,,,,,,,,,,,sample collection url,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PCDS: The URL associated with online material about a sample collection.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100588,Canadian pathogen genomics specification,,A data specification established for pathogen genomics contextual data (metadata) harmonization and curation across Canadian data providers.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100588,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788,2022-12-09T20:18:38.91Z,,,,,,,,,,,,,,,,,,,Canadian pathogen genomics specification,,,,,,,,,,,,,,,,,,,,,,https://github.com/cidgoh/pathogen-genomics-package,,,,,,,,,,A data specification established for pathogen genomics contextual data (metadata) harmonization and curation across Canadian data providers.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03601063,antibiotic-free food product claim,,A label claim that no natural or synthetic antibiotics were added during the production of a food product.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03601063,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,antibiotic-free food product claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A label claim that no natural or synthetic antibiotics were added during the production of a food product.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100469,phagetype,phagetype,A data field which describes the phagetype of the organism.,FALSE,,,,,,,PCDS:phagetype,,,,,,,"PCDS: Provide if known. If unknown, put 'missing'.",,,,,,,,,,,,,,PCDS: 47,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,phagetype,phagetype slot,,,,GENEPIO:0100469,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,phagetype,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the phagetype of the organism.,,PCDS: The phagetype of the organism.,,,,,,
http://purl.obolibrary.org/obo/MONDO_0002515,hepatobiliary disorder,liver and biliary system disorder|liver and biliary disorder|liver and biliary disease|hepatobiliary system disease or disorder|hepatobiliary system disease|hepatobiliary disorder|disorder of hepatobiliary system|disease or disorder of hepatobiliary system|disease of hepatobiliary system,"A non-neoplastic or neoplastic disorder that affects the liver, bile ducts, and gallbladder. Representative examples of non-neoplastic disorders include hepatitis, cirrhosis, cholangitis, and cholecystitis. Representative examples of neoplastic disorders include hepatocellular adenoma, hepatocellular carcinoma, and cholangiocarcinoma.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0267792|NCIT:C3959|MEDGEN:82758|EFO:0010284|DOID:3118,,,,,,,,,,,,,,,,,,,,,,,,,liver and biliary system disorder|liver and biliary disorder|liver and biliary disease|hepatobiliary system disease or disorder|hepatobiliary system disease|hepatobiliary disorder|disorder of hepatobiliary system|disease or disorder of hepatobiliary system|disease of hepatobiliary system,,,,MONDO:0002515,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,hepatobiliary disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A non-neoplastic or neoplastic disorder that affects the liver, bile ducts, and gallbladder. Representative examples of non-neoplastic disorders include hepatitis, cirrhosis, cholangitis, and cholecystitis. Representative examples of neoplastic disorders include hepatocellular adenoma, hepatocellular carcinoma, and cholangiocarcinoma.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001696,listeria serotype 3b,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001696,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,listeria serotype 3b,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038037,subclavian lymph node,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:234498,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0038037,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,subclavian lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001011,MIRU24 - international standard,,The MIRU24 - international standard is a mycobacterial interspersed repetitive units (MIRU) typing method that classifies Mycobacterium tuberculosis complex (MBTC) bacteria according to a multiple locus VNTR [variable number of tandem repeats] analysis (MLVA) typing scheme of counts of repeats at 24 sequence loci.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,254532233433235152213423,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001011,,,,"The ordering of loci is as follows: MIRU 04, MIRU 26, MIRU 40, MIRU 10, MIRU 16, MIRU 31, 424	577, 2165, 401, 3690, 4156, 2163, 1955, 4052, MIRU 02, MIRU 23, MIRU 39, MIRU 20, MIRU 24, MIRU 27, 2347, 2461, 3171",,,,,,,,,,,,,,,,,,,,,,,,,,,,,MIRU24 - international standard,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The MIRU24 - international standard is a mycobacterial interspersed repetitive units (MIRU) typing method that classifies Mycobacterium tuberculosis complex (MBTC) bacteria according to a multiple locus VNTR [variable number of tandem repeats] analysis (MLVA) typing scheme of counts of repeats at 24 sequence loci.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100063,central cyanosis,,"Generalized bluish discoloration of the body and the visible mucous membranes, which occurs due to inadequate oxygenation secondary to conditions that lead to an increase in deoxygenated hemoglobin or presence of abnormal hemoglobin.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100063,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,central cyanosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Generalized bluish discoloration of the body and the visible mucous membranes, which occurs due to inadequate oxygenation secondary to conditions that lead to an increase in deoxygenated hemoglobin or presence of abnormal hemoglobin.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000058,beef chuck eye steak,,A steak cut from the rib end only of the chuck eye roll.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000058,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef chuck eye steak,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A steak cut from the rib end only of the chuck eye roll.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001040,vegetarian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001040,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,vegetarian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0778,Bougainville in Papua New Guinea (SGDP),Bougainville,A population made up of 2 samples from Bougainville individuals recruited in Papua New Guinea as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Oceanian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Bougainville,,,,HANCESTRO:0778,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Bougainville in Papua New Guinea (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Bougainville individuals recruited in Papua New Guinea as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Oceanian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0772,"Mozabite in Mzab, Algeria (HGDP)",Mozabite,"A population made up of 27 samples from Mozabite individuals recruited in Mzab, Algeria as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Greater Middle Eastern  (Middle Eastern or North African or Persian).",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Mozabite,,,,HANCESTRO:0772,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,"Mozabite in Mzab, Algeria (HGDP)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A population made up of 27 samples from Mozabite individuals recruited in Mzab, Algeria as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Greater Middle Eastern  (Middle Eastern or North African or Persian).",,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0775,Papuan Highlands in New Guinea (HGDP),Papuan Highlands,A population made up of 6 samples from Papuan Highlands individuals recruited in New Guinea as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Oceanian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Papuan Highlands,,,,HANCESTRO:0775,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Papuan Highlands in New Guinea (HGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 6 samples from Papuan Highlands individuals recruited in New Guinea as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Oceanian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0771,"Druze in Carmel, Israel (HGDP)",Druze,"A population made up of 40 samples from Druze individuals recruited in Carmel, Israel as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Greater Middle Eastern  (Middle Eastern or North African or Persian).",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Druze,,,,HANCESTRO:0771,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,"Druze in Carmel, Israel (HGDP)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A population made up of 40 samples from Druze individuals recruited in Carmel, Israel as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Greater Middle Eastern  (Middle Eastern or North African or Persian).",,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0779,Dusun in Brunei (SGDP),Dusun,A population made up of 2 samples from Dusun individuals recruited in Brunei as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Oceanian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Dusun,,,,HANCESTRO:0779,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Dusun in Brunei (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Dusun individuals recruited in Brunei as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Oceanian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0770,"Bedouin in Negev, Israel (HGDP)",Bedouin,"A population made up of 44 samples from Bedouin individuals recruited in Negev, Israel as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Greater Middle Eastern  (Middle Eastern or North African or Persian).",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Bedouin,,,,HANCESTRO:0770,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,"Bedouin in Negev, Israel (HGDP)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A population made up of 44 samples from Bedouin individuals recruited in Negev, Israel as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Greater Middle Eastern  (Middle Eastern or North African or Persian).",,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0773,"Palestinian in Central, Israel (HGDP)",Palestinian,"A population made up of 43 samples from Palestinian individuals recruited in Central, Israel as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Greater Middle Eastern  (Middle Eastern or North African or Persian).",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Palestinian,,,,HANCESTRO:0773,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,"Palestinian in Central, Israel (HGDP)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A population made up of 43 samples from Palestinian individuals recruited in Central, Israel as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Greater Middle Eastern  (Middle Eastern or North African or Persian).",,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0776,Papuan Sepik in New Guinea (HGDP),Papuan Sepik,A population made up of 8 samples from Papuan Sepik individuals recruited in New Guinea as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Oceanian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Papuan Sepik,,,,HANCESTRO:0776,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Papuan Sepik in New Guinea (HGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 8 samples from Papuan Sepik individuals recruited in New Guinea as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Oceanian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0774,Bougainville in Bougainville (HGDP),Bougainville,A population made up of 11 samples from Bougainville individuals recruited in Bougainville as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Oceanian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Bougainville,,,,HANCESTRO:0774,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Bougainville in Bougainville (HGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 11 samples from Bougainville individuals recruited in Bougainville as part of the Human Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Oceanian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0777,Australian in Australia (SGDP),Australian,A population made up of 2 samples from Australian individuals recruited in Australia as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Oceanian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Australian,,,,HANCESTRO:0777,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Australian in Australia (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Australian individuals recruited in Australia as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation Oceanian.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490276,"glass container, uncoloured, strengthened",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0276,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490276,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"glass container, uncoloured, strengthened",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490410,animal hair container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0410,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490410,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,animal hair container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100328,NCBI SRA filetype,filetype,PCDS: Provide the filetype by selecting a value from the pick list.,FALSE,,,,,,,PCDS:ncbi_sra_filetype,,,,,,,PCDS: Provide the filetype by selecting a value from the pick list.,,,,,,,,,,,"These metadata fields are defined specifically for use with the NCBI SRA submission template. They are organizational constructs intended to support a particular template and underlying database and should not be reused to model metadata outside the intended context. Where possible, more general, template‑independent terms should be used instead.",,,PCDS: fastq,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,filetype,NCBI SRA filetype,,,,GENEPIO:0100328,,,,,,,,,,,,,,2026-01-29T00:00:09.532Z,,,,,,,,,,,,,,,,,,,NCBI SRA filetype,,,,,,,,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/core/assets/sra/files/SRA_metadata_acc_example.xlsx,,,,,,,,,,,,PCDS: See NCBI SRA template for details.,,,,,,
http://purl.obolibrary.org/obo/CHEBI_3510,ceftibuten,,"A third-generation cephalosporin antibiotic with a [(2<i>Z</i>)-2-(2-amino-1,3-thiazol-4-yl)-4-carboxybut-2-enoyl]amino substituent at the 7 position of the cephem skeleton. An orally-administered agent, ceftibuten is used as the dihydrate to treat urinary-tract and respiratory-tract infections.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:554578,,,,,,CHEBI:3510,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,ceftibuten,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A third-generation cephalosporin antibiotic with a [(2<i>Z</i>)-2-(2-amino-1,3-thiazol-4-yl)-4-carboxybut-2-enoyl]amino substituent at the 7 position of the cephem skeleton. An orally-administered agent, ceftibuten is used as the dihydrate to treat urinary-tract and respiratory-tract infections.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100649,travel history availability,,"PCDS: If travel history is available, but the details of travel cannot be provided, indicate this and the type of travel history availble by selecting a value from the picklist. The values in this field can be used to indicate a sample is associated with a travel when the 'purpose of sequencing' is not travel-associated.",FALSE,,,,,,,PCDS:travel_history_availability,,,,,,,"PCDS: If travel history is available, but the details of travel cannot be provided, indicate this and the type of travel history availble by selecting a value from the picklist. The values in this field can be used to indicate a sample is associated with a travel when the 'purpose of sequencing' is not travel-associated.",,,,,,,,,,,,,,PCDS: International travel history available,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100649,,,,,,,,,,,,,,2026-04-13T17:16:47.336Z,,,,,,,,,,,,,,,,,,,travel history availability,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PCDS: The availability of different types of travel history in the last 6 months.,,,,,,
http://purl.obolibrary.org/obo/OMIT_0013933,Specimen Handling,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OMIT:0013933,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/omit.owl,,,,,,,,,Specimen Handling,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001563,genome size delta ratio,,"The 'genome size delta ratio' is a ratio of the difference between a sample's genome assembly size and the size of a given reference genome, over the reference genome size. 

The formula:

| (reference_genome_size - assembly_genome_size) | / reference_genome_size

This yeilds a decimal / percentage ranging from 0 = exact length, to say .1 which is equivalent to a 10% variance.  If the ratio is too far from a quality control ratio that depends on the species in question, this indicates a bad assembly or a mis-identified sample.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001563,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,,,,,,,genome size delta ratio,,,,,Assembly QC,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"The 'genome size delta ratio' is a ratio of the difference between a sample's genome assembly size and the size of a given reference genome, over the reference genome size. 

The formula:

| (reference_genome_size - assembly_genome_size) | / reference_genome_size

This yeilds a decimal / percentage ranging from 0 = exact length, to say .1 which is equivalent to a 10% variance.  If the ratio is too far from a quality control ratio that depends on the species in question, this indicates a bad assembly or a mis-identified sample.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001391,host disease,host_disease|host disease,A host data field which describes the name of the disease experienced by the host.,FALSE,,,,,,,PCDS:host_disease,,,,,,,PCDS: Select 'Measles' from the pick list provided in the template.,,,,,,,,,,,,,,PCDS: Mpox,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,host_disease|host disease,host disease slot,,,,GENEPIO:0001391,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,host disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A host data field which describes the name of the disease experienced by the host.,,PCDS: The name of the disease experienced by the host.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102041,diagnostic gene symbol,gene symbol 3|gene symbol 2|gene symbol 1|GENEPIO:0102043|GENEPIO:0102042,PCDS: Select a gene name value from the pick list provided.,FALSE,,,,,,,PCDS:gene_symbol_*,,,,,,,PCDS: Select a gene name value from the pick list provided.,,,,,,,,,,,,,,PCDS: gyrase A,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,gene symbol 3|gene symbol 2|gene symbol 1|GENEPIO:0102043|GENEPIO:0102042,,,,GENEPIO:0102041,,,,,,,,,,,,,,2026-04-13T17:18:02.461Z,,,,,,,,,,,,,,,,,,,diagnostic gene symbol,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PCDS: The gene symbol used in the diagnostic RT-PCR test.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100802,total solids ts measurement method,total solids (TS) measurement method,An environmental data field which describes the method used to measure total solids (TS).,FALSE,,,,,,,PCDS:total_solids_ts_measurement_method,,,,,,,PCDS: Provide the name of the procedure or technology used to measure TS.,,,,,,,,,,,,,,"PCDS: Gravimetric method by oven drying, then weighing",,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,total solids (TS) measurement method,total solids (TS) measurement method slot,,,,GENEPIO:0100802,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,total solids ts measurement method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the method used to measure total solids (TS).,,PCDS: The method used to measure total solids (TS).,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490146,paperboard container with plastic liner,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0146,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490146,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,paperboard container with plastic liner,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000987,market,public market,"A part of an ecosystem where people gather for the purchase and sale of provisions, livestock, and other goods.",FALSE,,,,,,,,,,,,,,"As with campgrounds and fairgrounds, land use is the key differentia here. The regularity of marketplace activities may provide a differentia for further growth of this branch.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public market,tianguis|souk|palengke|mercado|marketplace|bazaar,,,,ENVO:01000987,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,market,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A part of an ecosystem where people gather for the purchase and sale of provisions, livestock, and other goods.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_61120,nucleobase-containing molecular entity,,Any compound that has a nucleobase as a part.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:61120,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,nucleobase-containing molecular entity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any compound that has a nucleobase as a part.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_24833,oxoacid,,"A compound which contains oxygen, at least one other element, and at least one hydrogen bound to oxygen, and which produces a conjugate base by loss of positive hydrogen ion(s) (hydrons).",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:24833,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,oxoacid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A compound which contains oxygen, at least one other element, and at least one hydrogen bound to oxygen, and which produces a conjugate base by loss of positive hydrogen ion(s) (hydrons).",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002232,fecal indicator,,"A collection of organisms that is indicative of faecal
contamination.",FALSE,,,,,,,,,,,,,,"Fecal indicator organism collections include bacterial groups such as thermotolerant coliforms or E. coli. Hence, they only infer that pathogens may be present",,,,,,,https://www.who.int/water_sanitation_health/dwq/iwachap13.pdf,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002232,,,,,,,,,,,,,,2020-02-08T20:15:43Z,,,,,,,,,,,,,,,,,,,fecal indicator,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://orcid.org/0000-0002-8844-9165,,,,"A collection of organisms that is indicative of faecal
contamination.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100826,sequence assembly software version,assembly software version,A data field which describes the version of the software used to assemble a sequence.,FALSE,,,,,,,PCDS:sequence_assembly_software_version,,,,,,,PCDS: Provide the version of the software used to assemble the sequence.,,,,,,,,,,,,,,PCDS: 3.15.5,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,assembly software version,,,,GENEPIO:0100826,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,sequence assembly software version,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the version of the software used to assemble a sequence.,,PCDS: The version of the software used to assemble a sequence.,,,,,,
http://purl.obolibrary.org/obo/NCIT_C25667,Secondary,Secondary,Derived as a result of a primary condition; not direct or immediate; of second rank or importance or value.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Secondary,,,,NCIT:C25667,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Secondary,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Derived as a result of a primary condition; not direct or immediate; of second rank or importance or value.,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000238,Yao,,A Bantu Eastern population with a population size of > 2 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000238,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Yao,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Bantu Eastern population with a population size of > 2 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000231,Mozabite,,A Berber Northern population with a population size of 0.150 million,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000231,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Mozabite,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Berber Northern population with a population size of 0.150 million,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000237,Lomwe,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000237,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Lomwe,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000236,Ngoni,,"A Bantu Eastern, Bantu Southern population with a population size of 0.758 million",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000236,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Ngoni,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A Bantu Eastern, Bantu Southern population with a population size of 0.758 million",,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000239,Mang'anja,,"A Chewa population with a population size of 2.486 millions, known as the people of the lake",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000239,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Mang'anja,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A Chewa population with a population size of 2.486 millions, known as the people of the lake",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100111,Illumina HiSeq X,,A DNA sequencer manufactured by the Illumina corporation using sequence-by-synthesis chemistry that oenabled sufficent depth and coverage to produce the first 30x human genome for $1000.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100111,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,Illumina HiSeq X,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A DNA sequencer manufactured by the Illumina corporation using sequence-by-synthesis chemistry that oenabled sufficent depth and coverage to produce the first 30x human genome for $1000.,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C41009,Qualifier,Qualifier|Modifier,A term that helps define and render a concept unique.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Qualifier|Modifier,,,,NCIT:C41009,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Qualifier,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A term that helps define and render a concept unique.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038647,lymph node of inferior pulmonary ligament,station 9 lymph node|station 9 N2 lymph node|pulmonary ligament lymph node|node of inferior pulmonary ligament|inferior pulmonary ligament lymph node|9R+L thoracic lymph node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:276867,,,,,,,,,,,,,,,,,,,,,,,,,station 9 lymph node|station 9 N2 lymph node|pulmonary ligament lymph node|node of inferior pulmonary ligament|inferior pulmonary ligament lymph node|9R+L thoracic lymph node,,,,UBERON:0038647,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,lymph node of inferior pulmonary ligament,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038641,segmental lymph node,station 13 lymph node|station 13 N1 lymph node|13R+L thoracic lymph node,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:276855,,,,,,,,,,,,,,,,,,,,,,,,,station 13 lymph node|station 13 N1 lymph node|13R+L thoracic lymph node,,,,UBERON:0038641,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,segmental lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510261,menopaused woman as food consumer,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0261,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510261,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,menopaused woman as food consumer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000022,one dimensional cartesian coordinate system,,"A one dimensional cartesian coordinate system is a cartesian coordinate system which defines a one dimensional axis and which may be used to describe a one dimensional spatial region, i.e. a straight line. It is defined by a point O, the origin, a unit of length and the orientation for the one dimensional space.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000022,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,one dimensional cartesian coordinate system,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra|Orlaith Burke|Alejandra Gonzalez-Beltran,,,,"A one dimensional cartesian coordinate system is a cartesian coordinate system which defines a one dimensional axis and which may be used to describe a one dimensional spatial region, i.e. a straight line. It is defined by a point O, the origin, a unit of length and the orientation for the one dimensional space.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000365,veal sirloin (raw),,A raw veal sirloin.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000365,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,veal sirloin (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw veal sirloin.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001948,DNAse method,,Deoxyribonuclease (MNase) digestion,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI SRA: DNAse,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001948,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DNAse method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Deoxyribonuclease (MNase) digestion,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100733,molecular characterization data tag,molecular characterization data type|microbiological quantification attribute bundle,A dataset attribute bundle which indicates the presence of molecular characterization data.,FALSE,,,,,,,Molecular characterization,,,,,,,Example Guidance: Use this tag to indicate additional data is available that provides characterization information from molecular properties.,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,molecular characterization data type|microbiological quantification attribute bundle,,,,GENEPIO:0100733,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-05-18T19:08:34.869Z,,,,,,,,,,,,,,,,,,,molecular characterization data tag,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A dataset attribute bundle which indicates the presence of molecular characterization data.,,,,,,,,
http://purl.obolibrary.org/obo/T4FS_0000309,provenance,,"A type of historical information or metadata about the origin, location or the source of something, or the history of the ownership or location of an object or resource including digital objects. For example, information about the Principal Investigator who recorded the data, and the information concerning its storage, handling, and migration.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,T4FS:0000309,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/t4fs.owl,,,,,,,,,provenance,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://orcid.org/0000-0003-2687-1982|https://orcid.org/0000-0002-7702-4495|https://orcid.org/0000-0002-5214-4466,,,,"A type of historical information or metadata about the origin, location or the source of something, or the history of the ownership or location of an object or resource including digital objects. For example, information about the Principal Investigator who recorded the data, and the information concerning its storage, handling, and migration.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03460200,acidification process,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=H0200,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03460200,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,acidification process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002020,admitted to hospital,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002020,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,admitted to hospital,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001035,obsolete: long term care facility,,A long term care facility provides a type of residential care. It is a place of residence for people who require continual nursing care and have significant difficulty coping with the required activities of daily living.,TRUE,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Nursing_home_care,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001035,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: long term care facility,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,http://purl.obolibrary.org/obo/ENVO_01000932,,,A long term care facility provides a type of residential care. It is a place of residence for people who require continual nursing care and have significant difficulty coping with the required activities of daily living.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02021246,lamb roast (boneless),,A boneless lamb roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02021246,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lamb roast (boneless),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A boneless lamb roast.,,,,,,,,
http://purl.obolibrary.org/obo/PATO_0002303,decreased object quality,,A quality of an object that has a value that is decreased compared to normal or average.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PATO:0002303,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/pato.owl,,,,,,,,,decreased object quality,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A quality of an object that has a value that is decreased compared to normal or average.,,,,,,,,
http://purl.obolibrary.org/obo/PATO_0002301,decreased quality,,A quality that has a value that is decreased compared to normal or average.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PATO:0002301,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/pato.owl,,,,,,,,,decreased quality,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A quality that has a value that is decreased compared to normal or average.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100859,midnight-bccdc-v2 strategy,,"An amplicon strategy which targets SARS-CoV-2 and is based on the original Midnight scheme developed by Oxford Nanopore Technologies, and adapted by the BCCDC Public Health Lab with the attributes of version 2.0.0 which produces amplicons approximately 1200bp in length.",FALSE,,,,,,,midnight-bccdc-v2|midnight bccdc v2,,,,,,,,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100859,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2026-04-13T19:52:38.515Z,,,,,,,,,,,,,,,,,,,midnight-bccdc-v2 strategy,,,,,,,,,,,,,,,,,,,,,,https://www.protocols.io/view/34-midnight-34-sars-cov2-genome-sequencing-protoc-14egn2q2yg5d/v1,,,,,,,,,,"An amplicon strategy which targets SARS-CoV-2 and is based on the original Midnight scheme developed by Oxford Nanopore Technologies, and adapted by the BCCDC Public Health Lab with the attributes of version 2.0.0 which produces amplicons approximately 1200bp in length.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_3716,cinoxacin,,"A member of the class of  cinnolines  that is 6,7-methylenedioxycinnolin-4(1<em>H</em>)-one bearing an ethyl group at position 1 and a carboxylic acid group at position 3. An analogue of oxolinic acid, it has similar antibacterial actions. It was formerly used for the treatment of urinary tract infections.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:314701,,,,,,CHEBI:3716,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,cinoxacin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A member of the class of  cinnolines  that is 6,7-methylenedioxycinnolin-4(1<em>H</em>)-one bearing an ethyl group at position 1 and a carboxylic acid group at position 3. An analogue of oxolinic acid, it has similar antibacterial actions. It was formerly used for the treatment of urinary tract infections.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03309079,"fish fillet (whitemeat, skinless, raw)",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://bioregistry.io/reference/siren:F9079,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03309079,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"fish fillet (whitemeat, skinless, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_85260,spiramycin I,,A macrolide antibiotic produced by various <em>Streptomyces</em> species that is used to treat toxoplasmosis and various other infections of soft tissues.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:9236|CHEBI:45589,,,,,,CHEBI:85260,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,spiramycin I,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A macrolide antibiotic produced by various <em>Streptomyces</em> species that is used to treat toxoplasmosis and various other infections of soft tissues.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102193,cubic meter per minute,,A volumetric flow rate unit which is the measure of the volume of one cubic meter of matter crosses a given surface during the period of time equal to one minute.,FALSE,,,,,,,m^3/min,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102193,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2026-04-13T19:52:38.515Z,,,,,,,,,,,,,,,,,,,cubic meter per minute,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A volumetric flow rate unit which is the measure of the volume of one cubic meter of matter crosses a given surface during the period of time equal to one minute.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001466,outbreak history record,,"An outbreak date may have an official start, but because it might be ongoing, it may not have an end (yet).",FALSE,,,,,,,,,,,,,,"An outbreak date may have an official start, but because it might be ongoing, it may not have an end (yet).",,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001466,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,outbreak history record,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HP_0100279,Ulcerative colitis,Colitis ulcerosa,"A chronic inflammatory bowel disease that includes characteristic ulcers, or open sores, in the colon. The main symptom of active disease is usually constant diarrhea mixed with blood, of gradual onset and intermittent periods of exacerbated symptoms contrasting with periods that are relatively symptom-free. In contrast to Crohn's disease this special form of colitis begins in the distal parts of the rectum, spreads continually upwards and affects only mucose and submucose tissue of the colon.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0009324|SNOMEDCT_US:64766004,,,,,,,,,,,,,,,,,,,,,,,,,Colitis ulcerosa,,,,HP:0100279,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Ulcerative colitis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A chronic inflammatory bowel disease that includes characteristic ulcers, or open sores, in the colon. The main symptom of active disease is usually constant diarrhea mixed with blood, of gradual onset and intermittent periods of exacerbated symptoms contrasting with periods that are relatively symptom-free. In contrast to Crohn's disease this special form of colitis begins in the distal parts of the rectum, spreads continually upwards and affects only mucose and submucose tissue of the colon.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00005720,food grading,,A food production process in which a food item is categorized into an ordinal rank according to some standard.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00005720,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food grading,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A food production process in which a food item is categorized into an ordinal rank according to some standard.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000053,16S rRNA sequencing,,16S ribosomal RNA sequencing is a sequencing method used to identify and compare bacteria present within a given sample. 16S rRNA gene sequencing is a well-established method for studying phylogeny and taxonomy of samples from complex microbiomes or environments that are difficult or impossible to study.,FALSE,,,,,,,,,,,,,,,,,,,,,URI: http://www.illumina.com/applications/microbiology/microbial-sequencing-methods/16S-rrna-sequencing.html,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000053,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,,,,,,,16S rRNA sequencing,,,,,Lab Analytic,,,,,,,,,,,,,,,,,,,,,,16S rRNA sequencing,,,inferred from BCCDC interviews,,16S ribosomal RNA sequencing is a sequencing method used to identify and compare bacteria present within a given sample. 16S rRNA gene sequencing is a well-established method for studying phylogeny and taxonomy of samples from complex microbiomes or environments that are difficult or impossible to study.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03440014,fully heat-treated,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=F0014,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03440014,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,fully heat-treated,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001191,organism,organism,A data field which describes the taxonomic name of the organism.,FALSE,,,,,,,PCDS:organism,,,,,,,"PCDS: The target taxonomic name refers to the specific species, genus, or other taxonomic classification that the assay or diagnostic test is designed to identify, detect, or characterize. This may include the full binomial name (Genus species) or a higher taxonomic rank (e.g., genus, family) when species-level identification is not applicable. Avoid abbreviations. Search for taxonomic names here: ncbi.nlm.nih.gov/taxonomy.",,,,,,,,,,,,,,PCDS: Staphylococcus aureus,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,organism,organism slot,,,,GENEPIO:0001191,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,organism,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the taxonomic name of the organism.,,"PCDS: The scientific name of the organism or taxon that is the focus of the study, assay, or diagnostic test.",,,,,,
http://purl.obolibrary.org/obo/ENVO_03501183,medical clinic,clinic,A healthcare facility which is used to provide outpatient health care services.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,clinic,outpatient clinic|ambulatory care clinic,,,,ENVO:03501183,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,medical clinic,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A healthcare facility which is used to provide outpatient health care services.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001658,draft GenEpiO isolate sequencing model,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001658,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,draft GenEpiO isolate sequencing model,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000138,"beef tenderloin steak (bone-in, raw)",,A raw beef tenderloin steak with bone.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000138,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"beef tenderloin steak (bone-in, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef tenderloin steak with bone.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100054,subject age at time of specimen collection bin (50 - 59),,An age group that stratifies the age of a case to be between 50 to 59 years old (inclusive).,FALSE,,,,,,,50 - 59,,,,,,,,,,,,,,,,,,,,,,,,ready for release,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100054,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,subject age at time of specimen collection bin (50 - 59),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An age group that stratifies the age of a case to be between 50 to 59 years old (inclusive).,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000078,beef ranch steak (raw),,A raw beef ranch steak.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000078,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef ranch steak (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef ranch steak.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001168,well water - treated,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001168,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,well water - treated,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/IDO_0000496,long-term non-progressing infectious disease course,,A chronic infectious disease course that does not progress to severe stages for a long period of time.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,IDO:0000496,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ido.owl,,,,,,,,,long-term non-progressing infectious disease course,,,,,,,,,,,,,,,,,,,,,,,,,,,,Lindsay Cowell|Alexander Diehl|Albert Goldfain,,,,A chronic infectious disease course that does not progress to severe stages for a long period of time.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100236,no prior infection,,An absence of infection that occurred within a host prior to the current infection.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100236,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,no prior infection,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An absence of infection that occurred within a host prior to the current infection.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0100326,Immunologic hypersensitivity,,Immunological states where the immune system produces harmful responses upon reexposure to sensitizing antigens.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0237653,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0100326,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Immunologic hypersensitivity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Immunological states where the immune system produces harmful responses upon reexposure to sensitizing antigens.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001037,food related exposure event,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001037,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,food related exposure event,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001268,host information field category,PCDS:host information,A data field category which refers to host information fields.,FALSE,,,,,,,PCDS:host_information_slot_group,,,,,,,,,,,,,,,,,,,,,,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,PCDS:host information,host information slot category,,,,GENEPIO:0001268,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,host information field category,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field category which refers to host information fields.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000401,beef porterhouse steak (raw),,A raw beef porterhouse steak.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000401,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef porterhouse steak (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef porterhouse steak.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100969,454 Genome Sequencer Junior,,A 454 Genome Sequencer that enables pyrosequencing to be performed and which is a benchtop model.,FALSE,,,,,,,454 GS Junior,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/454_Life_Sciences,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100969,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2023-11-28T18:23:15.862Z,,,,,,,,,,,,,,,,,,,454 Genome Sequencer Junior,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A 454 Genome Sequencer that enables pyrosequencing to be performed and which is a benchtop model.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_1247,blood coagulation disease,,A hematopoietic system disease that is characterized by abnormal blood clotting or bleeding.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:1247,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,blood coagulation disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A hematopoietic system disease that is characterized by abnormal blood clotting or bleeding.,,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_33317,Protostomia,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,Protostomia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:33317,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Protostomia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001644,isolate identifier,,An isolate identifier is an identifier assigned to a given isolate by a particular agency that is handling or storing it.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001644,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,isolate identifier,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,An isolate identifier is an identifier assigned to a given isolate by a particular agency that is handling or storing it.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000152,bioinformatics pipeline version,,A laboratory sequencing datum which describes the version of the bioinformatics pipeline used.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000152,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,bioinformatics pipeline version,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A laboratory sequencing datum which describes the version of the bioinformatics pipeline used.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0000893,real time polymerase chain reaction assay,,"An assay, based on the PCR, that amplifies and simultaneously quantifies a specific DNA molecule based on the use of complementary probes/primers. It enables both detection and quantification (as absolute number of copies or relative amount when normalized to DNA input or additional normalizing genes) of one or more specific sequences in a DNA sample.",FALSE,,,,,,,quantitative real time polymerase chain reaction|qPCR|kinetic polymerase chain reaction|Q-PCR,,,,,,,,,,,,,,url:http://en.wikipedia.org/wiki/Real-time_polymerase_chain_reaction,,,,,real time polymerase chain reaction assay,,,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0000893,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,real time polymerase chain reaction assay,,,,,,,,,,,,,,,,,,,,,,,,,,,,Melanie Courtot|Bjoern Peters,,,,"An assay, based on the PCR, that amplifies and simultaneously quantifies a specific DNA molecule based on the use of complementary probes/primers. It enables both detection and quantification (as absolute number of copies or relative amount when normalized to DNA input or additional normalizing genes) of one or more specific sequences in a DNA sample.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020870,bison chop,,"A retail cut of meat from a bison that is perpendicular to the spine, and usually containing a rib or riblet part of a vertebra.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020870,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,bison chop,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A retail cut of meat from a bison that is perpendicular to the spine, and usually containing a rib or riblet part of a vertebra.",,,,,,,,
http://purl.obolibrary.org/obo/UO_1000165,volume percentage based unit,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:1000165,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,volume percentage based unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UO_1000163,mass percentage based unit,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:1000163,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,mass percentage based unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UO_1000164,mass volume percentage based unit,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:1000164,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,mass volume percentage based unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000990,sink fixture,wash basin|hand basin,"A plumbing fixture which is bowl-shaped and used for washing hands, dishwashing, and other purposes.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,wash basin|hand basin,,,,ENVO:01000990,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,sink fixture,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A plumbing fixture which is bowl-shaped and used for washing hands, dishwashing, and other purposes.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100058,subject age at time of specimen collection bin (90 - 99),,An age group that stratifies the age of a case to be between 90 to 99 years old (inclusive).,FALSE,,,,,,,90 - 99,,,,,,,,,,,,,,,,,,,,,,,,ready for release,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100058,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,subject age at time of specimen collection bin (90 - 99),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An age group that stratifies the age of a case to be between 90 to 99 years old (inclusive).,,,,,,,,
http://purl.obolibrary.org/obo/HP_0033127,Abnormality of the musculoskeletal system,,"An anomaly of the musculoskeletal system, which consists of the bones of the skeleton, muscles, cartilage, tendons, ligaments, joints, and other connective tissue. The musculoskeletal system supports the weight of the body, maintains body position and produces movements of the body or of parts of the body.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0033127,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormality of the musculoskeletal system,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An anomaly of the musculoskeletal system, which consists of the bones of the skeleton, muscles, cartilage, tendons, ligaments, joints, and other connective tissue. The musculoskeletal system supports the weight of the body, maintains body position and produces movements of the body or of parts of the body.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001911,integer,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001911,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,integer,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,^([-+]?[1-9]\d*|0)$,
http://purl.obolibrary.org/obo/CHEBI_22632,arsenic molecular entity,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:22632,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,arsenic molecular entity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490109,"laminate tube, ends lined with laminate",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0109,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490109,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"laminate tube, ends lined with laminate",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001831,ISO3166-2,,"ISO 3166-2 is part of the ISO 3166 standard published by the International Organization for Standardization (ISO), and defines codes for identifying the principal subdivisions (e.g., provinces or states) of all countries coded in ISO 3166-1.",FALSE,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/ISO_3166-1,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001831,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ISO3166-2,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"ISO 3166-2 is part of the ISO 3166 standard published by the International Organization for Standardization (ISO), and defines codes for identifying the principal subdivisions (e.g., provinces or states) of all countries coded in ISO 3166-1.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002148,date value specification (ISO 8601),,"A date should be recorded as YYYY-MM-DD according to ISO 8601.  HOWEVER ... OWL 2.0 does not include xsd:date as a permitted data type, so this value specification only accepts xsd:dateTime",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002148,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,date value specification (ISO 8601),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A date should be recorded as YYYY-MM-DD according to ISO 8601.  HOWEVER ... OWL 2.0 does not include xsd:date as a permitted data type, so this value specification only accepts xsd:dateTime",,,,date (ISO 8601),,,,
http://purl.obolibrary.org/obo/GENEPIO_0101074,taxonomic analysis report filename,taxonomic analysis report filename,A data field which describes the filename of the report containing the results of a taxonomic analysis.,FALSE,,,,,,,PCDS:taxonomic_analysis_report_filename,,,,,,,PCDS: Provide the filename of the report containing the results of the taxonomic analysis.,,,,,,,,,,,,,,PCDS: MVs_report123.doc,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,taxonomic analysis report filename,taxonomic analysis report filename slot,,,,GENEPIO:0101074,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,taxonomic analysis report filename,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the filename of the report containing the results of a taxonomic analysis.,,PCDS: The filename of the report containing the results of a taxonomic analysis.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100952,automatic sequential composite sampling device,,"A composite sampler that collects multiple samples at fixed time intervals, regardless of flow rate, to produce a time-weighted composite sample.",FALSE,,,,,,,automatic time-proportional sampler|automatic sequential sampler,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100952,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-11-20T16:24:25Z,,,,,,,,,,,,,,,,,,,automatic sequential composite sampling device,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A composite sampler that collects multiple samples at fixed time intervals, regardless of flow rate, to produce a time-weighted composite sample.",,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000481,silica-based glass,glass,"Silica-based glass is a glass composed primarily of silicon dioxide, the primary constituent of sand.",FALSE,,,,,,,,,,,,,,Silica-based glasses are the most common manufactured variety of glass.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,glass,,,,,ENVO:01000481,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,silica-based glass,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Silica-based glass is a glass composed primarily of silicon dioxide, the primary constituent of sand.",,,,,,,,
http://purl.obolibrary.org/obo/HP_0011675,Arrhythmia,Irregular heartbeat|Irregular heart beat|Heart rhythm disorders|Cardiac rhythm disturbances|Cardiac arrhythmias|Cardiac arrhythmia|Arrhythmias|Abnormal heart rate,Any cardiac rhythm other than the normal sinus rhythm. Such a rhythm may be either of sinus or ectopic origin and either regular or irregular. An arrhythmia may be due to a disturbance in impulse formation or conduction or both.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C1842820|UMLS:C1832603|UMLS:C0855329|UMLS:C0522055|UMLS:C0264886|UMLS:C0003811|SNOMEDCT_US:698247007|SNOMEDCT_US:44808001|SNOMEDCT_US:102594003,,,,,,,,,,,,,,,,,,,,,,,HP:0005158|HP:0004351|HP:0001721|HP:0001687|HP:0001675|HP:0001666|HP:0001665|HP:0001661|HP:0001656,,Irregular heartbeat|Irregular heart beat|Heart rhythm disorders|Cardiac rhythm disturbances|Cardiac arrhythmias|Cardiac arrhythmia|Arrhythmias|Abnormal heart rate,,,,HP:0011675,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Arrhythmia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any cardiac rhythm other than the normal sinus rhythm. Such a rhythm may be either of sinus or ectopic origin and either regular or irregular. An arrhythmia may be due to a disturbance in impulse formation or conduction or both.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_03501216,stainless steel,stainless|inox steel,Steel which is composed primarily of a corrosion resistant alloy of iron and chromium.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,stainless|inox steel,,,,ENVO:03501216,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,stainless steel,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Steel which is composed primarily of a corrosion resistant alloy of iron and chromium.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470163,drying by radiation,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0163,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470163,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,drying by radiation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GSSO_003565,gender diversity,,Equitable representation of persons of different genders.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://www.wikidata.org/wiki/Q1501335|https://en.wikipedia.org/wiki/Gender_diversity,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GSSO:003565,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gsso.owl,,,,,,,,,gender diversity|gender diversity|diversité de genre,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Equitable representation of persons of different genders.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0003750,Increased muscle fatiguability,,"An abnormal, increased fatiguability of the musculature.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4025573|UMLS:C0242979|SNOMEDCT_US:80449002,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0003750,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Increased muscle fatiguability,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An abnormal, increased fatiguability of the musculature.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_38163,organic heterotetracyclic compound,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:38163,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,organic heterotetracyclic compound,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001535,obsolete: NCBI BioProject ID,,This is a subset of OBI investigation identifier.  It pertains only to NCBI Biosample projects,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001535,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: NCBI BioProject ID,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,http://purl.obolibrary.org/obo/OBI_0001628,,,This is a subset of OBI investigation identifier.  It pertains only to NCBI Biosample projects,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0007357,proventriculus,,The glandular or true stomach of a bird that is situated between the crop and gizzard.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Proventriculus|SCTID:63897003|NCIT:C111301|MESH:D011531|GAID:1239|BTO:0001136,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0007357,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,proventriculus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The glandular or true stomach of a bird that is situated between the crop and gizzard.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0007359,ruminant forestomach,forestomach,"Any of the first three stomachs of a ruminant, i.e., the rumen, reticulum, or omasum.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,BTO:0000480,,,,,,,,,,,,,,,,,,,,,,,,forestomach,,,,,UBERON:0007359,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,ruminant forestomach,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Any of the first three stomachs of a ruminant, i.e., the rumen, reticulum, or omasum.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0007358,abomasum,,"The fourth stomach of ruminating animals, which is an elongated pear-shaped sac lying on the floor of the abdomen, on the right-hand side, and roughly between the seventh and twelfth ribs. It leads to the beginning of the small intestine. (Adapted From Black's Veterinary Dictionary, 17th ed).",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wikipedia:Abomasum|UMLS:C0000780|SCTID:410028001|NCIT:C98702|MESH:D000018|GAID:1241|BTO:0000024,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0007358,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,abomasum,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The fourth stomach of ruminating animals, which is an elongated pear-shaped sac lying on the floor of the abdomen, on the right-hand side, and roughly between the seventh and twelfth ribs. It leads to the beginning of the small intestine. (Adapted From Black's Veterinary Dictionary, 17th ed).",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100741,quantitative polymerase chain reaction (qPCR) marker organism quantification tag,quantitative polymerase chain reaction (qPCR) marker organism quantification data type|qPCR marker organism quantification tag|qPCR marker organism quantification data type,A molecular quantification data tag which indicates the presence of quantitative polymerase chain reaction (qPCR) marker organism quantification data.,FALSE,,,,,,,qPCR marker organism quantification,,,,,,,Example Guidance: Use this tag to indicate additional data is available that provides quantification information from qPCR marker organism assay(s).,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,quantitative polymerase chain reaction (qPCR) marker organism quantification data type|qPCR marker organism quantification tag|qPCR marker organism quantification data type,,,,GENEPIO:0100741,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-05-18T19:08:34.869Z,,,,,,,,,,,,,,,,,,,quantitative polymerase chain reaction (qPCR) marker organism quantification tag,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A molecular quantification data tag which indicates the presence of quantitative polymerase chain reaction (qPCR) marker organism quantification data.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0802,Bengali in Bangladesh (1KGP),Bengali|BEB,A population made up of 144 samples from Bengali individuals recruited in Bangladesh as part of the 1000 Genomes Project. The population was assigned by the collecting project to the superpopulation South Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Bengali|BEB,,,,HANCESTRO:0802,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Bengali in Bangladesh (1KGP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 144 samples from Bengali individuals recruited in Bangladesh as part of the 1000 Genomes Project. The population was assigned by the collecting project to the superpopulation South Asian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0800,Sindhi in Pakistan (SGDP),Sindhi,A population made up of 2 samples from Sindhi individuals recruited in Pakistan as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation South Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Sindhi,,,,HANCESTRO:0800,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Sindhi in Pakistan (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Sindhi individuals recruited in Pakistan as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation South Asian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0803,"Gujarati Indians in Houston, TX (1KGP)",Gujarati|GIH,"A population made up of 113 samples from Gujarati Indians individuals recruited in Houston, TX as part of the 1000 Genomes Project. The population was assigned by the collecting project to the superpopulation South Asian.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Gujarati|GIH,,,,HANCESTRO:0803,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,"Gujarati Indians in Houston, TX (1KGP)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A population made up of 113 samples from Gujarati Indians individuals recruited in Houston, TX as part of the 1000 Genomes Project. The population was assigned by the collecting project to the superpopulation South Asian.",,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0808,Adygei in Russia(Caucasus) (SGDP),Adygei,A population made up of 2 samples from Adygei individuals recruited in Russia(Caucasus) as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Adygei,,,,HANCESTRO:0808,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Adygei in Russia(Caucasus) (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Adygei individuals recruited in Russia(Caucasus) as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0804,"Punjabi in Lahore, Pakistan (1KGP)",Punjabi|PJL,"A population made up of 158 samples from Punjabi individuals recruited in Lahore, Pakistan as part of the 1000 Genomes Project. The population was assigned by the collecting project to the superpopulation South Asian.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Punjabi|PJL,,,,HANCESTRO:0804,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,"Punjabi in Lahore, Pakistan (1KGP)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A population made up of 158 samples from Punjabi individuals recruited in Lahore, Pakistan as part of the 1000 Genomes Project. The population was assigned by the collecting project to the superpopulation South Asian.",,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0801,Yadava in India (SGDP),Yadava,A population made up of 2 samples from Yadava individuals recruited in India as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation South Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Yadava,,,,HANCESTRO:0801,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Yadava in India (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Yadava individuals recruited in India as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation South Asian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0805,Sri Lankan Tamil in the UK (1KGP),Tamil|STU,A population made up of 128 samples from Sri Lankan Tamil individuals recruited in the UK as part of the 1000 Genomes Project. The population was assigned by the collecting project to the superpopulation South Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Tamil|STU,,,,HANCESTRO:0805,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Sri Lankan Tamil in the UK (1KGP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 128 samples from Sri Lankan Tamil individuals recruited in the UK as part of the 1000 Genomes Project. The population was assigned by the collecting project to the superpopulation South Asian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0807,Abkhasian in Abkhazia or Russia (SGDP),Abkhasian,A population made up of 2 samples from Abkhasian individuals recruited in Abkhazia or Russia as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Abkhasian,,,,HANCESTRO:0807,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Abkhasian in Abkhazia or Russia (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Abkhasian individuals recruited in Abkhazia or Russia as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0806,Indian Telugu in the UK (1KGP),Telugu|ITU,A population made up of 118 samples from Indian Telugu individuals recruited in the UK as part of the 1000 Genomes Project. The population was assigned by the collecting project to the superpopulation South Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Telugu|ITU,,,,HANCESTRO:0806,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Indian Telugu in the UK (1KGP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 118 samples from Indian Telugu individuals recruited in the UK as part of the 1000 Genomes Project. The population was assigned by the collecting project to the superpopulation South Asian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0809,Albanian in Albania (SGDP),Albanian,A population made up of 1 samples from Albanian individuals recruited in Albania as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Albanian,,,,HANCESTRO:0809,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Albanian in Albania (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 1 samples from Albanian individuals recruited in Albania as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation West Eurasian.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03430125,"divided into pieces, thickness more than 1.5 cm.",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=E0125,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03430125,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"divided into pieces, thickness more than 1.5 cm.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_76,stomach disease,,A gastrointestinal system disease that is located_in the stomach.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:76,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,stomach disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A gastrointestinal system disease that is located_in the stomach.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_35990,bridged compound,,A polycyclic compound that contains more than one ring with at least two common atoms (also known as bridgehead carbons) that are not adjacent to each other.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:35990,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,bridged compound,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A polycyclic compound that contains more than one ring with at least two common atoms (also known as bridgehead carbons) that are not adjacent to each other.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_27369,zwitterion,,"A neutral compound having formal unit electrical charges of opposite sign on non-adjacent atoms. Sometimes referred to as inner salts, dipolar ions (a misnomer).",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:27369,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,zwitterion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A neutral compound having formal unit electrical charges of opposite sign on non-adjacent atoms. Sometimes referred to as inner salts, dipolar ions (a misnomer).",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000036,the Global Microbial Identifier Minimum Data for Matching (MDM) Standard,,"The Global Microbial Identifier ""Minimum data for Matching"" (MDM) standard is a standard that defines essential contextual data fields to be included in genomic sequence repository records.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000036,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,the Global Microbial Identifier Minimum Data for Matching (MDM) Standard,,,,,,,,,,,,,,,,,,,,,,http://www.globalmicrobialidentifier.org/-/media/Sites/gmi/News-and-events/2013/6th-meeting-2013-report.ashx?la=da,,,,,,Damion Dooley,,,,"The Global Microbial Identifier ""Minimum data for Matching"" (MDM) standard is a standard that defines essential contextual data fields to be included in genomic sequence repository records.",,,,GMI MDM standard,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100568,low quality sequence datum,,A data item that describes sequence data that does not meet quality control thresholds.,FALSE,,,,,,,low quality sequence,,,,,,,,,,,,,,,,,,,,,,,,ready for release,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100568,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-1107-9135,2023-01-23T00:42:19.315Z,,,,,,,,,,,,,,,,,,,low quality sequence datum,,,,,,,,,,,,,,,,,,,,,,The PHA4GE QC Contextual Data Tags Specification: https://github.com/pha4ge/contextual-data-qc-tags,,,,,,,,,,A data item that describes sequence data that does not meet quality control thresholds.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000441,bison top sirloin butt,,A bison cut that is located behind the short loin on the top back end of the animal.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000441,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,bison top sirloin butt,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A bison cut that is located behind the short loin on the top back end of the animal.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000098,island,,Area of dry or relatively dry land surrounded by water or low wetland.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Island|TGN:21475|TGN:21471|TGN:21469|TGN:21468|SWEETRealm:Island|Geonames:T.ISLS|Geonames:T.ISL|FTT:889|FTT:888|FTT:887|FTT:886|FTT:450|FTT:147|EcoLexicon:island,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00000098,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,envoPolar,,,,,,,,island,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Area of dry or relatively dry land surrounded by water or low wetland.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470108,preservation by treatment with chemicals,,"Preservation by immersing in or spraying with liquids (e.g., sulfite solutions) or surrounding with gases (e.g., ethylene oxide, propylene oxide or sulfur dioxide) to destroy undesirable microorganisms or inactivate enzymes. Diffusion and chemical reaction may create a residue in the food product that contributes to continuing preservation.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0108,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470108,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,preservation by treatment with chemicals,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Preservation by immersing in or spraying with liquids (e.g., sulfite solutions) or surrounding with gases (e.g., ethylene oxide, propylene oxide or sulfur dioxide) to destroy undesirable microorganisms or inactivate enzymes. Diffusion and chemical reaction may create a residue in the food product that contributes to continuing preservation.",,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000797,gaseous environmental material,gas,A material entity which is composed of one or more chemical entities and has neither independent shape nor volume but tends to expand indefinitely.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,gas,,,ENVO:01000797,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,gaseous environmental material,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A material entity which is composed of one or more chemical entities and has neither independent shape nor volume but tends to expand indefinitely.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001670,induced abortion,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001670,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,induced abortion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001109,random survey project,,Random Survey: sequence generated from a random sampling of the collected sample; not intended to be comprehensive sampling of the material.,FALSE,,,,,,,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/books/NBK54364/,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001109,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,random survey project,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,Random Survey: sequence generated from a random sampling of the collected sample; not intended to be comprehensive sampling of the material.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002154,specimen collection date (ISO 8601),,"The date on which a specimen was collected, in ISO 8601 format.",FALSE,,,,,,,,,,,,,,"The date on which a specimen was collected, in ISO 8601 format.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002154,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,specimen collection date (ISO 8601),,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/OBI_0001619,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/OMIT_0012935,Recurrence,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OMIT:0012935,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/omit.owl,,,,,,,,,Recurrence,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001964,other library method,,"Other library enrichment, screening, or selection process.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI SRA: other,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001964,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,other library method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Other library enrichment, screening, or selection process.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510066,no or reduced energy claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0066,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510066,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,no or reduced energy claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001779,PFGE Xbal pattern,,A PFGE pattern resulting from DNA fragmentation induced by the Xbal enzyme.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001779,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0001710,,,,,,PFGE Xbal pattern,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://orcid.org/0000-0002-8844-9165,,,,A PFGE pattern resulting from DNA fragmentation induced by the Xbal enzyme.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470165,drying by microwave radiation,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0165,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470165,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,drying by microwave radiation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_03501108,passenger train,,A train which is capable of and used for passenger transport.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:03501108,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,passenger train,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A train which is capable of and used for passenger transport.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03430124,"sliced, thick, between 0.5 and 1.5 cm.",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=E0124,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03430124,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"sliced, thick, between 0.5 and 1.5 cm.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000444,bison top sirloin steak (raw),,A raw bison top sirloin steak.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000444,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,bison top sirloin steak (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw bison top sirloin steak.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000243,lamb shoulder blade roast,,A roast that is derived from the blade portion of the lamb shoulder primal. The cut location is from either the flat bone or the center portion of the Blade,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000243,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lamb shoulder blade roast,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A roast that is derived from the blade portion of the lamb shoulder primal. The cut location is from either the flat bone or the center portion of the Blade,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100520,AMR testing standard details,antimicrobial resistance testing standard details|AMR_testing_standard_details|AMR testing standard details,An antimicrobial resistance (AMR) field which describes additional details associated with the testing standard used for determination of resistance phenotype.,FALSE,,,,,,,PCDS:amr_testing_standard_details|PCDS:*_testing_standard_details,,,,,,,"PCDS: This information may include the year or location where the testing standard was published. If not applicable, leave blank.",,,,,,,,,,,,,,"PCDS: 27th ed. Wayne, PA: Clinical and Laboratory Standards Institute; 2017.",,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,antimicrobial resistance testing standard details|AMR_testing_standard_details|AMR testing standard details,antimicrobial resistance testing standard details slot|antimicrobial resistance testing standard details field|AMR testing standard details slot,,,,GENEPIO:0100520,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-12-22T00:55:53.808Z,,,,,,,,,,,,,,,,,,,AMR testing standard details,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An antimicrobial resistance (AMR) field which describes additional details associated with the testing standard used for determination of resistance phenotype.,,PCDS: The additional details associated with the testing standard used for determination of resistance phenotype,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000465,beef retail cut (raw),,A raw beef retail cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000465,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef retail cut (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef retail cut.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000124,draft pathogenic epidemiology case investigation record,,This is a model of the datums involved in an epidemiology investigation.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000124,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,draft pathogenic epidemiology case investigation record,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,This is a model of the datums involved in an epidemiology investigation.,,,,,,,,
http://purl.obolibrary.org/obo/ARO_3004390,antimicrobial resistance test platform,,System of analysis for determining antimicrobial susceptibility.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ARO:3004390,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/aro.owl,,,,,,,,,antimicrobial resistance test platform|antimicrobial resistance test platform,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,System of analysis for determining antimicrobial susceptibility.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_22563,anion,,A monoatomic or polyatomic species having one or more elementary charges of the electron.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:22563,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,anion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A monoatomic or polyatomic species having one or more elementary charges of the electron.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100718,microbiological identification tag (Biolog),microbiological identification data type (Biolog),A microbiological characterization data tag which indicates the presence of microbiological identification data derived using the Biolog identification system.,FALSE,,,,,,,microbiological identification (Biolog),,,,,,,Example Guidance: Use this tag to indicate additional data is available that provides identification information from microbiology properties generated using Biolog.,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,microbiological identification data type (Biolog),,,,GENEPIO:0100718,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-05-18T19:08:34.869Z,,,,,,,,,,,,,,,,,,,microbiological identification tag (Biolog),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A microbiological characterization data tag which indicates the presence of microbiological identification data derived using the Biolog identification system.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510197,food quality claim,,"Food Quality/Food Assurance Claim indicates, with reference to the product branding, labelling or packaging, whether the product is stamped with a quality mark, as approved by the governing authority, such as USDA for USA products [Source: GS1].",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0197,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510197,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food quality claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Food Quality/Food Assurance Claim indicates, with reference to the product branding, labelling or packaging, whether the product is stamped with a quality mark, as approved by the governing authority, such as USDA for USA products [Source: GS1].",,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0004928,lymph node disorder,lymph node disorder|lymph node disease or disorder|lymph node disease|disorder of lymph node|disease or disorder of lymph node|disease of lymph node,Any disorder of the lymph nodes.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0272394|SCTID:76616003|NCIT:C35346|MEDGEN:78802|DOID:9942,,,,,,,,,,,,,,,,,,,,,,,,,lymph node disorder|lymph node disease or disorder|lymph node disease|disorder of lymph node|disease or disorder of lymph node|disease of lymph node,,,,MONDO:0004928,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,lymph node disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any disorder of the lymph nodes.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0031467,Dysregulated negative emotional state,Negative valence dysregulation|Mood dysregulation|Maladaptive emotions|Maladaptive affect response|Dysregulated moods|Dysregulated emotions,"An emotional state characterized by excessive, persistent, or contextually inappropriate negative inner experiences involving emotional arousal and valence. These experiences are often associated with negative perceptions of the self, the future, the past, or the surrounding environment, and may include affective bias such as interpreting neutral or ambiguous stimuli as negative. The intensity, duration, or impact of the state exceeds what would be expected for the individual based on their baseline emotional functioning, the context, cultural norms, or situational triggers, or when it persists despite efforts at self-regulation.",FALSE,,,,,,,,,,,,,,"Manifestations may be conveyed through self-report or observed through behavior, allowing applicability across the lifespan and in individuals with limited verbal communication. This term refers to an observed negative emotional state rather than enduring traits of personality or temperament.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Negative valence dysregulation|Mood dysregulation|Maladaptive emotions|Maladaptive affect response|Dysregulated moods|Dysregulated emotions,Unregulated negative emotions|Persistent negative affect state|Pathologically negative emotions|Overwhelming negative emotions|Negative attitude|In a funk|Gloomy mood|Foul mood|Feeling out of sorts|Feeling bad,,,,HP:0031467,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Dysregulated negative emotional state,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An emotional state characterized by excessive, persistent, or contextually inappropriate negative inner experiences involving emotional arousal and valence. These experiences are often associated with negative perceptions of the self, the future, the past, or the surrounding environment, and may include affective bias such as interpreting neutral or ambiguous stimuli as negative. The intensity, duration, or impact of the state exceeds what would be expected for the individual based on their baseline emotional functioning, the context, cultural norms, or situational triggers, or when it persists despite efforts at self-regulation.",,,,,,,,
http://purl.obolibrary.org/obo/IDO_0000592,immune population,,An organism population whose members have acquired immunity to an infectious agent.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,IDO:0000592,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ido.owl,,,,,,,,,immune population,,,,,,,,,,,,,,,,,,,,,,,,,,,,Lindsay Cowell|Alexander Diehl|Albert Goldfain,,,,An organism population whose members have acquired immunity to an infectious agent.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470179,higher heat shorter time (HHST) pasteurization,,"Higher Heat Shorter Time (HHST) is a process similar to HTST pasteurization, but it uses slightly different equipment and higher temperatures (83 - 127° C) for a shorter time.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0179,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470179,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,higher heat shorter time (HHST) pasteurization,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Higher Heat Shorter Time (HHST) is a process similar to HTST pasteurization, but it uses slightly different equipment and higher temperatures (83 - 127° C) for a shorter time.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490309,steel plate container tinned both sides,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0309,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490309,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,steel plate container tinned both sides,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0000456,secretion of exocrine gland,secretion,A portion of organism substance that is produced by exocrine glands.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:Secretion|UMLS:C1516992|NCIT:C34062|MESH:D012634|MA:0002504|FMA:9675|EMAPA:36535|BTO:0002979|BTO:0002977|AEO:0001005,,,,,,,,,,,,,,,,,,,,,,,UBERON:0006540,secretion,secreted substance|exocrine gland fluid/secretion|bodily secretion,,,,UBERON:0000456,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,secretion of exocrine gland,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A portion of organism substance that is produced by exocrine glands.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0005978,Type II diabetes mellitus,"Type II diabetes|Type 2 diabetes|Noninsulin-dependent diabetes|Noninsulin dependent diabetes mellitus|Non-insulin dependent diabetes|NIDDM diabetes mellitus|NIDDM|Diabetes mellitus, noninsulin-dependent|Diabetes mellitus Type II",A type of diabetes mellitus initially characterized by insulin resistance and hyperinsulinemia and subsequently by glucose interolerance and hyperglycemia.,FALSE,,,,,,,,,,,,,,Persons with type II diabetes mellitus rarely develop ketoacidosis.,,,,,,,,,,,,,,,,,,UMLS:C0011860|SNOMEDCT_US:44054006,,,,,,,,,,,,,,,,,,,,,,,HP:0100652|HP:0005965,,"Type II diabetes|Type 2 diabetes|Noninsulin-dependent diabetes|Noninsulin dependent diabetes mellitus|Non-insulin dependent diabetes|NIDDM diabetes mellitus|NIDDM|Diabetes mellitus, noninsulin-dependent|Diabetes mellitus Type II",,,,HP:0005978,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Type II diabetes mellitus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A type of diabetes mellitus initially characterized by insulin resistance and hyperinsulinemia and subsequently by glucose interolerance and hyperglycemia.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470129,"food sterilization by hot filling, held hot and cooling",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0129,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470129,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"food sterilization by hot filling, held hot and cooling",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C5044,Fluid and Electrolyte Manifestation,Fluid and Electrolyte Manifestation,A cardiovascular system finding that indicates a fluid and electrolyte imbalance.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Fluid and Electrolyte Manifestation,,,,NCIT:C5044,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Fluid and Electrolyte Manifestation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A cardiovascular system finding that indicates a fluid and electrolyte imbalance.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_23824,diol,,"A compound that contains two hydroxy groups, generally assumed to be, but not necessarily, alcoholic. Aliphatic diols are also called glycols.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:23824,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,diol,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A compound that contains two hydroxy groups, generally assumed to be, but not necessarily, alcoholic. Aliphatic diols are also called glycols.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000439,bison sirloin,,A bison primal cut that is contained within the larger cut 'bison loin'. It is located between the short loin and the round and includes the hip section and ends at the socket of the pelvis.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000439,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,bison sirloin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A bison primal cut that is contained within the larger cut 'bison loin'. It is located between the short loin and the round and includes the hip section and ends at the socket of the pelvis.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100824,sample temperature when received unit,sample temperature unit (when received),An environmental data field which describes the units of a measurement of temperature of a sample at the time upon receipt.,FALSE,,,,,,,PCDS:sample_temperature_unit_when_received,,,,,,,PCDS: Provide the units of the measured temperature.,,,,,,,,,,,,,,PCDS: degree Celsius (C),,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,sample temperature unit (when received),sample temperature when received unit slot,,,,GENEPIO:0100824,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,sample temperature when received unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the units of a measurement of temperature of a sample at the time upon receipt.,,PCDS: The units of a measurement of temperature of a sample at the time upon receipt.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002058,obsolete: Biomérieux,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002058,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: Biomérieux,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ARO_3004406,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490187,"plastic container, rigid or semirigid, plastic lid",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0187,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490187,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"plastic container, rigid or semirigid, plastic lid",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001108,proteome project,,Proteome: large scale proteomics experiment including mass spec. analysis,FALSE,,,,,,,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/books/NBK54364/,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001108,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,proteome project,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,Proteome: large scale proteomics experiment including mass spec. analysis,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100734,16S rRNA Sanger sequencing characterization tag,16S rRNA Sanger sequencing data type,A molecular characterization data tag which indicates the presence of 16S rRNA Sanger sequencing characterization data.,FALSE,,,,,,,16S rRNA Sanger sequencing,,,,,,,Example Guidance: Use this tag to indicate additional data is available that provides characterization information from 16S rRNA Sanger sequencing.,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,16S rRNA Sanger sequencing data type,,,,GENEPIO:0100734,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-05-18T19:08:34.869Z,,,,,,,,,,,,,,,,,,,16S rRNA Sanger sequencing characterization tag,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A molecular characterization data tag which indicates the presence of 16S rRNA Sanger sequencing characterization data.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530037,fat back,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0037,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530037,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,fat back,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000150,beef top sirloin steak (raw),,A raw beef top sirloin steak.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000150,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef top sirloin steak (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef top sirloin steak.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100798,total dissolved solids (TDS) measurement unit,total dissolved solids (TDS) measurement unit,An environmental data field which describes the units associated with a value from a total dissolved solids (TDS) test.,FALSE,,,,,,,PCDS:total_dissolved_solids_tds_measurement_unit,,,,,,,PCDS: Provide the units of the measured TDS.,,,,,,,,,,,,,,PCDS: percent (%),,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,total dissolved solids (TDS) measurement unit,total dissolved solids (TDS) measurement unit slot,,,,GENEPIO:0100798,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,total dissolved solids (TDS) measurement unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the units associated with a value from a total dissolved solids (TDS) test.,,PCDS: The units associated with a value from a total dissolved solids (TDS) test.,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020540,"piece of turkey breast (skinless, raw)",,A raw piece of skinless turkey breast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020540,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"piece of turkey breast (skinless, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw piece of skinless turkey breast.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03500055,teflon surface,,"A surface of Teflon, a trade name for a polymer used to provide better protection and longer life to porous metals (nickel alloys) in coextruded sheets and films.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=N0055,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03500055,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,teflon surface,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A surface of Teflon, a trade name for a polymer used to provide better protection and longer life to porous metals (nickel alloys) in coextruded sheets and films.",,,,,,,,
http://www.ebi.ac.uk/efo/EFO_0005105,lipid or lipoprotein measurement,,quantification of some lipid or lipoprotein,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,efo:EFO_0005105,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,lipid or lipoprotein measurement,,,,,,,,,,,,,,,,,,,,,,,,,,,,Dani Welter,,,,quantification of some lipid or lipoprotein,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03450043,double steaming,,"A Chinese cooking technique to prepare delicate food such as bird nests, shark fins, etc. The food is covered with water and put in a covered ceramic jar and the jar is then steamed for several hours.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=G0043,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03450043,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,double steaming,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A Chinese cooking technique to prepare delicate food such as bird nests, shark fins, etc. The food is covered with water and put in a covered ceramic jar and the jar is then steamed for several hours.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100531,AMR testing standard version,antimicrobial resistance testing standard version|AMR_testing_standard_version|AMR testing standard version,"An antimicrobial resistance (AMR) field which describes version number associated with the testing standard used for determination of resistance phenotype. If applicable, include a version number for the testing standard used.",FALSE,,,,,,,PCDS:amr_testing_standard_version|PCDS:*_testing_standard_version,,,,,,,"PCDS: If applicable, include a version number for the testing standard used.",,,,,,,,,,,,,,PCDS: M100,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,antimicrobial resistance testing standard version|AMR_testing_standard_version|AMR testing standard version,antimicrobial resistance testing standard version slot|antimicrobial resistance testing standard version field|AMR testing standard version slot,,,,GENEPIO:0100531,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-12-22T00:55:53.808Z,,,,,,,,,,,,,,,,,,,AMR testing standard version,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An antimicrobial resistance (AMR) field which describes version number associated with the testing standard used for determination of resistance phenotype. If applicable, include a version number for the testing standard used.",,PCDS: The version number associated with the testing standard used for determination of resistance phenotype,,,,,,
http://purl.obolibrary.org/obo/FOODON_00002679,fish fillet,,"A fish fillet, from the French word filet meaning a thread or strip, is the flesh of a fish which has been cut or sliced away from the bone by cutting lengthwise along one side of the fish parallel to the backbone.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00002679,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,fish fillet,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A fish fillet, from the French word filet meaning a thread or strip, is the flesh of a fish which has been cut or sliced away from the bone by cutting lengthwise along one side of the fish parallel to the backbone.",,,,,,,,
http://purl.obolibrary.org/obo/NCBITaxon_2,Bacteria,,,FALSE,,,,,,,eubacteria|bacteria,,,,,,,,,,,,,,,,,,,Bacteria,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBITaxon:2,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncbitaxon.owl,,,,,,,,,Bacteria,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002142,decimal value specification,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002142,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,decimal value specification,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0002002,Illumina HiSeq 2500,,"A DNA sequencer which is manufactured by the Illumina corporation, with two flow cells and a throughput of up to 160 Gb per day. Built upon sequencing by synthesis technology, the machine is optimized for generation of data for batching multiple samples or rapid results on a few samples.",FALSE,,,,,,,HiSeq 2500,,,,,,,,,,,,,,http://res.illumina.com/documents/products/datasheets/datasheet_hiseq2500.pdf,,,,,Illumina HiSeq 2500,,"Spaethling, Jennifer M., and James H. Eberwine. ""Single-cell transcriptomics for drug target discovery."" Current opinion in pharmacology (2013). pmid:23725882",,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0002002,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Illumina HiSeq 2500,,,,,,,,,,,,,,,,,,,,,,,,,,,,"PERSON: Venkat Malladi, Chris Stoeckert, Jie Zheng, Alan Ruttenberg",,,,"A DNA sequencer which is manufactured by the Illumina corporation, with two flow cells and a throughput of up to 160 Gb per day. Built upon sequencing by synthesis technology, the machine is optimized for generation of data for batching multiple samples or rapid results on a few samples.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_7332,esophageal tuberculosis,,"A gastrointestinal tuberculosis that involves formation of tuberculous ulcers located_in esophagus. The infection has_symptom dysphagia, has_symptom cough, has_symptom chest pain, has_symptom fever and has_symptom weight loss.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:7332,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,esophageal tuberculosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A gastrointestinal tuberculosis that involves formation of tuberculous ulcers located_in esophagus. The infection has_symptom dysphagia, has_symptom cough, has_symptom chest pain, has_symptom fever and has_symptom weight loss.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C85596,Epsilometry,Epsilometry|EPSILOMETER|E-Test,A method to determine microbial susceptibility to antibiotics in which a plastic strip impregnated with the antibiotic of interest is placed on an agar plate that has been inoculated with bacteria. The antibiotic diffuses from the strip producing a concentration gradient of drug on the agar. The point at which the elliptical shaped area of growth inhibition meets the strip is the minimum inhibitory concentration of the drug of interest.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Epsilometry|EPSILOMETER|E-Test,,,,NCIT:C85596,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Epsilometry,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A method to determine microbial susceptibility to antibiotics in which a plastic strip impregnated with the antibiotic of interest is placed on an agar plate that has been inoculated with bacteria. The antibiotic diffuses from the strip producing a concentration gradient of drug on the agar. The point at which the elliptical shaped area of growth inhibition meets the strip is the minimum inhibitory concentration of the drug of interest.,,,,E-test (Epsilometry),,,,
http://purl.obolibrary.org/obo/HP_0001892,Abnormal bleeding,Hemorrhagic diathesis|Bleeding tendency|Bleeding diathesis,"An abnormal susceptibility to bleeding, often referred to as a bleeding diathesis. A bleeding diathesis may be related to vascular, platelet and coagulation defects.",FALSE,,,,,,,,,,,,,,"This term is kept for historical reasons. If possible, a more exact description of the phenotype (i.e., whether there is a vascular, platelet and coagulation defect) should be attempted.",,,,,,,,,,,,,,,,,,UMLS:C1458140|SNOMEDCT_US:64779008|SNOMEDCT_US:248250000,,,,,,,,,,,,,,,,,,,,,,,HP:0008183|HP:0004865|HP:0004862|HP:0004849|HP:0004834|HP:0004830,,Hemorrhagic diathesis|Bleeding tendency|Bleeding diathesis,,,,HP:0001892,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal bleeding,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An abnormal susceptibility to bleeding, often referred to as a bleeding diathesis. A bleeding diathesis may be related to vascular, platelet and coagulation defects.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100077,postpartum (≤6 weeks),,The period of time less than or equal to six weeks after labor and delivery.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100077,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,postpartum (≤6 weeks),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The period of time less than or equal to six weeks after labor and delivery.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001877,datetime range end,,The ending date of a process,FALSE,,,,,,,,,,,,,,The ending date of a process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001877,,http://purl.obolibrary.org/obo/GENEPIO_0001878,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,datetime range end,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510206,source of protein,,"A claim that a food is a source of protein, and any claim likely to have the same meaning for the consumer, may only be made where at least 12 % of the energy value of the food is provided by protein. [REGULATION (EC) No 1924/2006 Corrigendum].",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0206,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510206,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,source of protein,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A claim that a food is a source of protein, and any claim likely to have the same meaning for the consumer, may only be made where at least 12 % of the energy value of the food is provided by protein. [REGULATION (EC) No 1924/2006 Corrigendum].",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000262,lamb leg bottom,,A boneless cut that comes from the outside and sirloin tip portion of any boneless leg cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000262,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lamb leg bottom,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A boneless cut that comes from the outside and sirloin tip portion of any boneless leg cut.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001149,third party lab sample ID,third party lab sample identifier|third party lab sample ID,An identifier field which describes the identifier assigned to a sample by a third party service provider.,FALSE,,,,,,,PCDS:third_party_lab_sample_id,,,,,,,PCDS: Store the sample identifier supplied by the third party services provider.,,,,,,,,,,,,,,PCDS: SHK123456,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,third party lab sample identifier|third party lab sample ID,third party lab sample identifier slot|third party lab sample identifier field|third party lab sample ID slot,,,,GENEPIO:0001149,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,third party lab sample ID,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An identifier field which describes the identifier assigned to a sample by a third party service provider.,,PCDS: The identifier assigned to a sample by a third party service provider.,,,,,,
http://purl.obolibrary.org/obo/NCIT_C21480,Relative,Relative|Relation|RELATIVE,A person related by blood or marriage.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Relative|Relation|RELATIVE,,,,NCIT:C21480,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Relative,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A person related by blood or marriage.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100851,artic-v4.1 strategy,,An amplicon strategy which was developed by the ARTIC consortium for SARS-CoV-2 with the attributes of version 4.1.0.,FALSE,,,,,,,artic-v4.1|artic v4.1,,,,,,,,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100851,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2026-04-13T19:52:38.515Z,,,,,,,,,,,,,,,,,,,artic-v4.1 strategy,,,,,,,,,,,,,,,,,,,,,,https://community.artic.network/t/sars-cov-2-v4-1-update-for-omicron-variant/342,,,,,,,,,,An amplicon strategy which was developed by the ARTIC consortium for SARS-CoV-2 with the attributes of version 4.1.0.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510230,food allergen labelling about pod fruits and products thereof,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0230,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510230,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food allergen labelling about pod fruits and products thereof,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000773,village,,"A village is a clustered human settlement or community, larger than a hamlet but smaller than a town, with a population ranging from a few hundred to a few thousand. Though often located in rural areas, the term urban village is also applied to certain urban neighbourhoods. Villages are normally permanent, with fixed dwellings; however, transient villages can occur. Further, the dwellings of a village are fairly close to one another, not scattered broadly over the landscape, as a dispersed settlement.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01000773,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,village,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A village is a clustered human settlement or community, larger than a hamlet but smaller than a town, with a population ranging from a few hundred to a few thousand. Though often located in rural areas, the term urban village is also applied to certain urban neighbourhoods. Villages are normally permanent, with fixed dwellings; however, transient villages can occur. Further, the dwellings of a village are fairly close to one another, not scattered broadly over the landscape, as a dispersed settlement.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001664,infection detail datum,,NECESSARY? : What details are categorical and what are freehand?  This item was originally too broad; moved sub-items to Treatment.,FALSE,,,,,,,,,,,,,,NECESSARY? : What details are categorical and what are freehand?  This item was originally too broad; moved sub-items to Treatment.,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001664,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,infection detail datum,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490119,"paper bag, sack or pouch, laminate liner",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0119,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490119,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"paper bag, sack or pouch, laminate liner",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001725,temperature of air - average daily,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001725,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/PATO_0000146|http://purl.obolibrary.org/obo/ENVO_00002005,,,,,,temperature of air - average daily,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001996,2D boundary,,A two dimensional boundary is a continuous path (loop) defined on a two dimensional surface.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001996,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,2D boundary,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A two dimensional boundary is a continuous path (loop) defined on a two dimensional surface.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_35716,C-nitro compound,,A nitro compound having the nitro group (‒NO<small><sub>2</sub></small>) attached to a carbon atom.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:35716,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,C-nitro compound,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A nitro compound having the nitro group (‒NO<small><sub>2</sub></small>) attached to a carbon atom.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0002650,biopsy,,A specimen collection that obtains a sample of tissue or cell from a living multicellular organism body for diagnostic purposes by means intended to be minimally invasive.,FALSE,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Biopsy,,,,,biopsy,,Biopsy of a potentially cancerous mole.,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/COB_0001300,,,,,,,,,,,OBI:0002650,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,biopsy,,,,,,,,,,,,,,,,,,,,,,,,,,,,Nicole Vasilevsky|Damion Dooley,,,,A specimen collection that obtains a sample of tissue or cell from a living multicellular organism body for diagnostic purposes by means intended to be minimally invasive.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510044,reduced cholesterol claim,,Food having at least 25% less cholesterol per amount customarily consumed from the cholesterol content of a comparable food product. The comparable food may not be 'low cholesterol'.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0044,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510044,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,reduced cholesterol claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Food having at least 25% less cholesterol per amount customarily consumed from the cholesterol content of a comparable food product. The comparable food may not be 'low cholesterol'.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0034434,Abnormal communication,,"Presence of any form of communication (e.g., verbal or non-verbal) that does not align with cultural expectations or developmental level.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:5200128,,,,,,HP:0034434,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal communication,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Presence of any form of communication (e.g., verbal or non-verbal) that does not align with cultural expectations or developmental level.",,,,,,,,
http://purl.obolibrary.org/obo/HP_0034430,Abnormal joint physiology,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0034430,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal joint physiology,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0002632,PacBio Sequel,,"A DNA sequencer built upon single molecule real-time sequencing technology, optimized for generation with long reads and high consensus accuracy, and manufactured by the Pacific Biosciences corporation",FALSE,,,,,,,Pacific BioSciences Sequel,,,,,,,,,,,,,,http://www.pacb.com/products-and-services/pacbio-systems/sequel/,,,,,PacBio Sequel,,The cDNAs were sequenced on the PacBio Sequel platform.,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0002632,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PacBio Sequel,,,,,,,,,,,,,,,,,,,,,,,,,,,,Dan Berrios|Bonita Lam,,,,"A DNA sequencer built upon single molecule real-time sequencing technology, optimized for generation with long reads and high consensus accuracy, and manufactured by the Pacific Biosciences corporation",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002125,hand scoop,,A shovel-like utensil that has a deep curved dish and a short handle and is used for digging into a soft substance for lifting out a portion.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002125,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135,2023-06-21T13:54:32Z,,,,,,,,,,,,,,,,,,,hand scoop,,,,,,,,,,,,,,,,,,,,,,,,,,,,Emma Griffiths,,,,A shovel-like utensil that has a deep curved dish and a short handle and is used for digging into a soft substance for lifting out a portion.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102295,Illumina MiSeq i100 Plus,,A DNA sequencer which is manufactured by the Illumina corporation and that is configured as an enhanced model of the MiSeq i100 Series with support for expanded sequencing capacity relative to the base model.,FALSE,,,,,,,,,,,,,,,,,,,,,https://www.illumina.com/content/dam/illumina/gcs/assembled-assets/marketing-literature/miseq-i100-specification-sheet-m-gl-02244/miseq-i100-specification-sheet-m-gl-02244.pdf,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102295,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2026-04-09T20:09:50.637Z,,,,,,,,,,,,,,,,,,,Illumina MiSeq i100 Plus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://github.com/GenEpiO/genepio/issues/90,A DNA sequencer which is manufactured by the Illumina corporation and that is configured as an enhanced model of the MiSeq i100 Series with support for expanded sequencing capacity relative to the base model.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510029,pet animal as consumer,,Pet animals as a consumer group; products are labeled accordingly.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0029,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510029,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pet animal as consumer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Pet animals as a consumer group; products are labeled accordingly.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03420116,organism material,,Material which is distinguished primarily by the organism(s) it derives from.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=C0116|http://www.langual.org/langual_thesaurus.asp?termid=B1564|http://www.langual.org/langual_thesaurus.asp?termid=B0001,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03420116,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,organism material,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Material which is distinguished primarily by the organism(s) it derives from.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_2676,amoxicillin,,A penicillin in which the substituent at position 6 of the penam ring is a 2-amino-2-(4-hydroxyphenyl)acetamido group.,FALSE,,,,,,,Amx,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:133770,,,,,,CHEBI:2676,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,amoxicillin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A penicillin in which the substituent at position 6 of the penam ring is a 2-amino-2-(4-hydroxyphenyl)acetamido group.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100323,NCBI SRA title,title,"A datum label which summarizes the sequencing library represented by a row in the National Center for Biotechnology Information (NCBI) Sequence Read Archive (SRA) submission template, intended to provide a human‑readable description of the library submission.",FALSE,,,,,,,PCDS:ncbi_sra_title,,,,,,,PCDS: Format: {methodology} of {organism}: {sample info},,,,,,,,,,,"These metadata fields are defined specifically for use with the NCBI SRA submission template. They are organizational constructs intended to support a particular template and underlying database and should not be reused to model metadata outside the intended context. Where possible, more general, template‑independent terms should be used instead.",,,"PCDS: Genomic sequencing of SARS-CoV-2: Nasopharynx (NP), Swab",,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,title,PHA4GE:NCBI SRA title,,,,GENEPIO:0100323,,,,,,,,,,,,,,2026-01-29T00:00:09.532Z,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000009,,,,,,NCBI SRA title,,,,,,,,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/core/assets/sra/files/SRA_metadata_acc_example.xlsx,,,,,,,,,,"A datum label which summarizes the sequencing library represented by a row in the National Center for Biotechnology Information (NCBI) Sequence Read Archive (SRA) submission template, intended to provide a human‑readable description of the library submission.",,PCDS: Short description that will identify the dataset on public pages.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002464,E. coli H antigen specification,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002464,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,E. coli H antigen specification,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0001077,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100488,transport worker,,A role inhering in a person that is realized when the bearer is engaged in transportation.,FALSE,,,,,,,Transport Worker,,,,,,,,,,,,,,https://www.lawinsider.com/dictionary/transportation-worker,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100488,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-01-23T00:42:19.315Z,,,,,,,,,,,,,,,,,,,transport worker,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A role inhering in a person that is realized when the bearer is engaged in transportation.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000997,environmental system determined by a quality,,An environmental system which is determined by materials bearing roughly homogeneous qualities.,FALSE,,,,,,,,,,,,,,Organisational class. Not intended for annotation.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01000997,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,environmental system determined by a quality,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental system which is determined by materials bearing roughly homogeneous qualities.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_10921,Siberian tick typhus,,"A spotted fever that has_material_basis_in Rickettsia sibirica, which is transmitted_by ticks (Dermacentor nuttalli, Dermacentor marginatus and Haemaphysalis concinna). The infection has_symptom fever, has_symptom eschar, has_symptom regional adenopathy, and has_symptom maculopapular rash.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:10921,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,Siberian tick typhus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A spotted fever that has_material_basis_in Rickettsia sibirica, which is transmitted_by ticks (Dermacentor nuttalli, Dermacentor marginatus and Haemaphysalis concinna). The infection has_symptom fever, has_symptom eschar, has_symptom regional adenopathy, and has_symptom maculopapular rash.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002098,obsolete: wild type (WT),,"A wild type (WT) resistance phenotype indicates a bacterial pathogen belongs to a ""Naïve"", susceptible wild-type population with respect to a given antimicrobial. No acquired or mutational resistance mechanisms are
present to the antimicrobial in question.",TRUE,,,,,,,,,,,,,,,,,,,,,https://sisu.ut.ee/sites/default/files/amr/files/pab_new_legislation_on_amr.pdf,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002098,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: wild type (WT),,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,http://purl.obolibrary.org/obo/ARO_3004432,,,"A wild type (WT) resistance phenotype indicates a bacterial pathogen belongs to a ""Naïve"", susceptible wild-type population with respect to a given antimicrobial. No acquired or mutational resistance mechanisms are
present to the antimicrobial in question.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000255,lamb leg (boneless),,A boneless lamb leg.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000255,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lamb leg (boneless),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A boneless lamb leg.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000020,obsolete: isolation date,,date the strain was isolated,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000020,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: isolation date,,,,,,,,,,,,,,,,,,,,,,,,,,,Isolation date,Damion Dooley,http://purl.obolibrary.org/obo/GENEPIO_0000021,inferred from BCCDC interviews,,date the strain was isolated,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490381,polyvinylidene chloride container,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0381,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490381,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,polyvinylidene chloride container,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C128042,Moderate to Late Preterm Infant,Moderate to Late Preterm Infant,An age group comprised of infants born alive with a gestational age between 32 to less than 37 weeks.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Moderate to Late Preterm Infant,,,,NCIT:C128042,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Moderate to Late Preterm Infant,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An age group comprised of infants born alive with a gestational age between 32 to less than 37 weeks.,,,,,,,,
http://purl.obolibrary.org/obo/OGMS_0000087,extended organism,,"An object aggregate consisting of an organism and all material entities located within the organism, overlapping the organism, or occupying sites formed in part by the organism.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OGMS:0000087,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,extended organism,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An object aggregate consisting of an organism and all material entities located within the organism, overlapping the organism, or occupying sites formed in part by the organism.",,,,,,,,
http://purl.obolibrary.org/obo/OBI_0002808,reusable footwear cover,,A footwear cover which is designed for repeated use.,FALSE,,,,,,,,,,,,,,,,,,,,,OBI,,,,,reusable footwear cover,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0002808,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,reusable footwear cover,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://orcid.org/0000-0002-8844-9165,,,https://github.com/obi-ontology/obi/issues/1193,A footwear cover which is designed for repeated use.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002031,ordinal value specification,,"An ordinal tree specification is a value specification entity whose subclasses each represent a possible value selection, and which have a linear order with respect to their siblings.",FALSE,,,,,,,,,,,,,,"An ordinal tree specification is a value specification entity whose subclasses each represent a possible value selection, and which have a linear order with respect to their siblings.",,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002031,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ordinal value specification,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001029,obsolete: social gathering,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001029,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: social gathering,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,http://purl.obolibrary.org/obo/PCO_0000033,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02020036,"animal roast (boneless, seasoned, fresh frozen)",,"A boneless, seasoned and freshly frozen animal roast.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02020036,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"animal roast (boneless, seasoned, fresh frozen)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A boneless, seasoned and freshly frozen animal roast.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470121,food filtration,,"Preservation by filtering out yeasts and molds, generally followed by aseptic packaging. FDA CFSAN 1995",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0121,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470121,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food filtration,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Preservation by filtering out yeasts and molds, generally followed by aseptic packaging. FDA CFSAN 1995",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C62649,Spouse,Spouse|SPOUSE,A person's partner in marriage.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Spouse|SPOUSE,,,,NCIT:C62649,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Spouse,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A person's partner in marriage.,,,,,,,,
http://purl.obolibrary.org/obo/OBA_2001016,age of onset of alcohol dependence,age at onset of alcohol dependence|age alcohol dependence symptoms begin,The age at which alcohol dependence manifestations first appear.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,age at onset of alcohol dependence|age alcohol dependence symptoms begin,,,,OBA:2001016,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age of onset of alcohol dependence,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The age at which alcohol dependence manifestations first appear.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000035,beef sirloin tip center roast,,A roast that derives from beef sirloin tip and only consists of M.rectus femoris.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000035,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef sirloin tip center roast,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A roast that derives from beef sirloin tip and only consists of M.rectus femoris.,,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000705,measurement accuracy as a percentage,,"Measurement accuracy refers to how close a measured value is to the true or accepted value of the quantity being measured.
It is a percentage in which the numerator represents the absolute value of one minus the difference between the true value and the observed value, and the denominator represents the true value.


Accuracy is often expressed as a percentage of the true value, based on the relative error:

Accuracy (%)= (1 −∣Measured Value−True Value∣/True Value)×100

True Value: The reference or accepted value.
Measured Value: The value obtained during the measurement.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000705,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,measurement accuracy as a percentage,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Brian S. Alper, Harold Lehmann, Muhammad Afzal, Joanne Dehnbostel",,,,"Measurement accuracy refers to how close a measured value is to the true or accepted value of the quantity being measured.
It is a percentage in which the numerator represents the absolute value of one minus the difference between the true value and the observed value, and the denominator represents the true value.


Accuracy is often expressed as a percentage of the true value, based on the relative error:

Accuracy (%)= (1 −∣Measured Value−True Value∣/True Value)×100

True Value: The reference or accepted value.
Measured Value: The value obtained during the measurement.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002178,obsolete: field specification,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002178,,,,,,,,,,,,,,2019-04-17T23:04:53Z,,,,,,,,,,,,,,,,,,,obsolete: field specification,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://w3id.org/linkml/SlotDefinition,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02021754,pork primal cut (raw),,A raw pork primal cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02021754,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pork primal cut (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw pork primal cut.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0005677,NML lab sample ID,Public Health Agency of Canada National Microbiology Laboratory lab number|PHAC NML lab number|National Microbiology Laboratory lab number|NML lab number,A data field which describes a string identifier assigned to a sample or specimen by a laboratory group within the Public Health Agency of Canada’s National Microbiology Laboratory (NML).,FALSE,,,,,,,PCDS:nml_lab number,,,,,,,PCDS: Enter the NML lab number exactly as generated and assigned by the NML Branch of the Public Health Agency of Canada. This identifier is used for internal tracking and linkage of specimens within NML laboratory workflows. Do not alter the formatting or substitute identifiers from other systems or organizations.,,,,,,,,,,,"These metadata fields are defined specifically to describe Public Health Agency of Canada’s (PHAC) National Microbiology Laboratory (NML) data fields. They are organizational constructs intended to support a particular template and underlying database and should not be reused to model metadata outside the intended context. Where possible, more general, template‑independent terms should be used instead.",,,PCDS: 24-001237,,,pending final vetting,,,,,,,,,,,,,,,,,,,,,,,,,Public Health Agency of Canada National Microbiology Laboratory lab number|PHAC NML lab number|National Microbiology Laboratory lab number|NML lab number,National Microbiology Laboratory lab number slot|National Microbiology Laboratory lab number field|NML lab sample number field|NML lab number slot,,,,GENEPIO:0005677,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-5275-8866|http://purl.obolibrary.org/obo/genepio/components/specification.owl#NMLB-DOT,2026-03-06T11:22:46Z,,,,,,,,,,,,,,,,,,,NML lab sample ID,,,,,,,,,,,,,,,,,,,,,,https://www.canada.ca/en/public-health/programs/national-microbiology-laboratory.html,,,,,,,,,https://github.com/GenEpiO/genepio/issues/111,A data field which describes a string identifier assigned to a sample or specimen by a laboratory group within the Public Health Agency of Canada’s National Microbiology Laboratory (NML).,,PCDS: A non-unique string identifier assigned to a sample or specimen by a laboratory group within the Public Health Agency of Canada’s National Microbiology Laboratory (NML).,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490198,drum (container),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0198,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490198,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,drum (container),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HP_0040288,Nasogastric tube feeding,,The condition of inability to eat normally treated by placement of a thin tube through the nose into the stomach that is then used to carry food.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0040288,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Nasogastric tube feeding,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The condition of inability to eat normally treated by placement of a thin tube through the nose into the stomach that is then used to carry food.,,,,,,,,
http://purl.obolibrary.org/obo/TRANS_0000002,indirect transmission,,"Indirect transmission is a transmission process during which the pathogen is indirectly transferred from a reservoir, source or host to another host by intermediary vehicles, vectors or as airborne dust particles.",FALSE,,,,,,,,,,,,,,,,,,,,,https://www.ebi.ac.uk/ols/ontologies/trans,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,TRANS:0000002,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,indirect transmission,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Indirect transmission is a transmission process during which the pathogen is indirectly transferred from a reservoir, source or host to another host by intermediary vehicles, vectors or as airborne dust particles.",,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000265,Nilotic Central,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000265,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Nilotic Central,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000261,Zoreille,,French people who were born in Metropolitan France.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000261,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Zoreille,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,French people who were born in Metropolitan France.,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000262,Sinwa,,A Eastern African population with a population size of 0.025 million,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000262,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Sinwa,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Eastern African population with a population size of 0.025 million,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000264,Ubangi Central,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000264,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Ubangi Central,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000269,Cushitic Eastern,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000269,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Cushitic Eastern,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000260,Zarabe,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000260,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Zarabe,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000266,Bangba,,A Ubangi Central population with a population size of 0.011 million,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000266,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Bangba,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Ubangi Central population with a population size of 0.011 million,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000268,Mayogo,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000268,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Mayogo,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000263,!Kung,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000263,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,!Kung,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100861,midnight-bccdc-v4 strategy,,"An amplicon strategy which targets SARS-CoV-2 and is based on the original Midnight scheme developed by Oxford Nanopore Technologies, and adapted by the BCCDC Public Health Lab with the attributes of version 4.0.0 which produces amplicons approximately 1200bp in length.",FALSE,,,,,,,midnight-bccdc-v4|midnight bccdc v4,,,,,,,,,,,,,,,,,,,,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100861,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2026-04-13T19:52:38.515Z,,,,,,,,,,,,,,,,,,,midnight-bccdc-v4 strategy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"An amplicon strategy which targets SARS-CoV-2 and is based on the original Midnight scheme developed by Oxford Nanopore Technologies, and adapted by the BCCDC Public Health Lab with the attributes of version 4.0.0 which produces amplicons approximately 1200bp in length.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100606,reference sequence accession number,,A centrally registered identifier symbol that specifies an individual sequence record in a public sequence repository and used as a basis for comparison against another sequence.,FALSE,,,,,,,reference accession | reference sequence accession identifier,,,,,,,,,,,,,,Emma Griffiths,,,,,reference sequence accession number,,"The ""Homo sapiens DRD2 mRNA"" sequence has the NCBI reference sequence identifier NM_000795.",,,ready for release,http://purl.obolibrary.org/obo/OBI_0002885,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100606,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,reference sequence accession number,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-1107-9135,,,https://github.com/obi-ontology/obi/issues/1579,A centrally registered identifier symbol that specifies an individual sequence record in a public sequence repository and used as a basis for comparison against another sequence.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_59673,colistin B,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:59673,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,colistin B,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100919,watershed shapefile availability,watershed shapefile availability,A data field which describes the availability status of a shapefile descriping the catchment contributing to a watershed.,FALSE,,,,,,,PCDS:watershed_shapefile_availability,,,,,,,PCDS: Select a value from the picklist to describe whether or not a watershed shapefile would be available upon request.,,,,,,,,,,,Drafted 2023-07-27,,,PCDS: watershed shapefile available,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,watershed shapefile availability,watershed shapefile availability slot,,,,GENEPIO:0100919,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,watershed shapefile availability,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the availability status of a shapefile descriping the catchment contributing to a watershed.,,PCDS: The availability status of a shapefile descriping the catchment contributing to a watershed.,,,,,,
http://purl.obolibrary.org/obo/ARO_3004400,MicroScan,,Specific automated system of analysis for determining antimicrobial susceptibility developed by Omron.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ARO:3004400,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/aro.owl,,,,,,,,,MicroScan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Specific automated system of analysis for determining antimicrobial susceptibility developed by Omron.,,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000413,incidence,,A proportion in which the numerator represents new events.,FALSE,,,,,,,incidence proportion|cumulative incidence,,,,,,,,,,,,,,adapted from: https://www.health.ny.gov/diseases/chronic/basicstat.htm,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000413,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,incidence,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Philippe Rocca-Serra|Brian S. Alper, Muhammad Afzal, Joanne Dehnbostel, Janice Tufte",,,,A proportion in which the numerator represents new events.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0000626,DNA sequencing assay,,A sequencing assay which determines information on the sequence of a DNA molecule.,FALSE,,,,,,,nucleotide sequencing,,,,,,,,,,,,,,url:https://en.wikipedia.org/wiki/DNA_sequencing,,,,,DNA sequencing assay,,Illumina (Solexa) sequencing is an example of DNA sequencing,,,http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0000626,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DNA sequencing assay,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra,,,,A sequencing assay which determines information on the sequence of a DNA molecule.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001776,pathogen specific data standard,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001776,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,pathogen specific data standard,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley|A public health related data standard involving a particular species of pathogen.,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03480032,packed in gas mixture,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=K0032,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03480032,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,packed in gas mixture,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0005151,endocrine system disorder,thyroid or other glandular disorders|endocrinopathy|endocrine system disorder|endocrine system disease or disorder|endocrine system disease|endocrine disorder|endocrine disease|disorder of endocrine system|disease or disorder of endocrine system|disease of endocrine system,A disease involving the endocrine system.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0014130|SCTID:362969004|NCIT:C3009|NANDO:2100109|NANDO:1100009|MESH:D004700|MEDGEN:4043|ICD9:259.9|ICD9:259.8|EFO:0001379|DOID:28,,,,,,,,,,,,,,,,,,,,,,,,,thyroid or other glandular disorders|endocrinopathy|endocrine system disorder|endocrine system disease or disorder|endocrine system disease|endocrine disorder|endocrine disease|disorder of endocrine system|disease or disorder of endocrine system|disease of endocrine system,,,,MONDO:0005151,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#rare_grouping|http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar|http://purl.oboInOwllibrary.org/oboInOwl/mondo#harrisons_view,,,,,,,,endocrine system disorder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A disease involving the endocrine system.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001406,number of vaccine doses received,number of vaccine doses received,A data field which describes the number of doses of the vaccine received by the host.,FALSE,,,,,,,PCDS:number_of_vaccine_doses_received,,,,,,,PCDS: Record how many doses of the vaccine the host has received.,,,,,,,,,,,,,,PCDS: 2,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,number of vaccine doses received,number of vaccine doses received slot,,,,GENEPIO:0001406,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,number of vaccine doses received,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the number of doses of the vaccine received by the host.,,PCDS: The number of doses of the vaccine recived by the host.,,,,,,
http://purl.obolibrary.org/obo/FOODON_02021755,pork sub-primal cut (raw),,A raw pork sub-primal cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02021755,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pork sub-primal cut (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw pork sub-primal cut.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0000079,culture medium,,a processed material that provides the needed nourishment for microorganisms or cells grown in vitro.,FALSE,,,,,,,,,,,,,,,,,,,,,OBI,,,,"changed from a role to a processed material based on on Aug 22, 2011 dev call. Details see the tracker item: http://sourceforge.net/tracker/?func=detail&aid=3325270&group_id=177891&atid=886178
Modification made by JZ.",culture medium,,"A growth medium or culture medium is a substance in which microorganisms or cells can grow.  Wikipedia, growth medium, Feb 29, 2008",,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0000079,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,culture medium,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Person: Jennifer Fostel, Jie Zheng",,,,a processed material that provides the needed nourishment for microorganisms or cells grown in vitro.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0002022,Illumina HiSeq 1000,,"A DNA sequencer which is manufactured by the Illumina corporation, with a single flow cell and a throughput of up to 35 Gb per day. It supports sequencing of single, long or short insert paired end clone libraries relying on sequencing by synthesis technology.",FALSE,,,,,,,HiSeq 1000,,,,,,,,,,,,,,http://res.illumina.com/documents/products/datasheets/datasheet_hiseq_systems.pdf,,,,,Illumina HiSeq 1000,,,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0002022,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Illumina HiSeq 1000,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Person: Venkat Malladi, Chris Stoeckert, Jie Zheng",,,,"A DNA sequencer which is manufactured by the Illumina corporation, with a single flow cell and a throughput of up to 35 Gb per day. It supports sequencing of single, long or short insert paired end clone libraries relying on sequencing by synthesis technology.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001736,pH measurement,,"In chemistry, pH is a numeric scale used to specify the acidity or basicity(alkalinity) of an aqueous solution|A data field which describes the DataHarmonizer software and template version provenance.",FALSE,,,,,,,PCDS:ph_measurement_value,,,,,,,PCDS: Provide the numerical value of the measured pH.|Normally falls within the bounds of 0 - 14,,,,,,,Wikipedia,,,,,,,PCDS: 7.4,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001736,,,,,,,,,,,,,,2026-04-13T17:18:02.461Z,,,,,,,,,,,,,,,,,,,ph measurement value|pH measurement,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"In chemistry, pH is a numeric scale used to specify the acidity or basicity(alkalinity) of an aqueous solution|A data field which describes the DataHarmonizer software and template version provenance.",,PCDS: The measured pH value indicating the acidity or basicity(alkalinity) of an aqueous solution.,,,,,,
http://purl.obolibrary.org/obo/FOODON_02021248,"lamb roast (boneless, seasoned, fresh frozen)",,"A boneless, seasoned and freshly frozen lamb roast.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02021248,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"lamb roast (boneless, seasoned, fresh frozen)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A boneless, seasoned and freshly frozen lamb roast.",,,,,,,,
http://purl.obolibrary.org/obo/ARO_3004411,agar well diffusion method,,"This test is a common method of evaluating the antimicrobial activity of plants or microbial extracts. In this method, bacteria are inoculated onto agar plates and the antimicrobial agent is injected into the plate and allowed to diffuse.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ARO:3004411,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/aro.owl,,,,,,,,,agar well diffusion method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"This test is a common method of evaluating the antimicrobial activity of plants or microbial extracts. In this method, bacteria are inoculated onto agar plates and the antimicrobial agent is injected into the plate and allowed to diffuse.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_121,vaginal disease,,A female reproductive system disease that is located_in the vagina.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:121,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,vaginal disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A female reproductive system disease that is located_in the vagina.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100953,grab sampling,,An environmental material collection process in which a water or soil sample is taken at a single point of time using a container type known as a grab sampler.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100953,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2023-11-20T16:24:25Z,,,,,,,,,,,,,,,,,,,grab sampling,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental material collection process in which a water or soil sample is taken at a single point of time using a container type known as a grab sampler.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001099,obsolete: NCBI Antibiogram model,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001099,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: NCBI Antibiogram model,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0001007,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000157,assembly project,,Genome assembly project utilizing already existing sequence data including data that was submitted by a different group,FALSE,,,,,,,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/books/NBK54364/,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000157,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,assembly project,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,Genome assembly project utilizing already existing sequence data including data that was submitted by a different group,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510025,horse as consumer,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0025,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510025,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,horse as consumer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0002000,Illumina Genome Analyzer IIx,,"An Illumina Genome Analyzer II which is manufactured by the Illumina corporation. It supports sequencing of single, long or short insert paired end clone libraries relying on sequencing by synthesis technology. The Genome Analyzer IIx is the most widely adopted next-generation sequencing platform and proven and published across the broadest range of research applications.",FALSE,,,,,,,Illumina GA IIx|Genome Analyzer IIx,,,,,,,,,,,,,,ENCODE group,,,,,Illumina Genome Analyzer IIx,,"Gravina, Michael T., Jenny H. Lin, and Stuart S. Levine. ""Lane-by-lane sequencing using Illumina's Genome Analyzer II."" BioTechniques 54.5 (2013): 265-269. PMID: 23662897",,,http://purl.obolibrary.org/obo/IAO_0000120,NCBI SRA: Illumina Genome Analyzer IIx,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0002000,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Illumina Genome Analyzer IIx,,,,,,,,,,,,,,,,,,,,,,,,,,,,"PERSON: Venkat Malladi, Chris Stoeckert, Jie Zheng, Alan Ruttenberg",,,,"An Illumina Genome Analyzer II which is manufactured by the Illumina corporation. It supports sequencing of single, long or short insert paired end clone libraries relying on sequencing by synthesis technology. The Genome Analyzer IIx is the most widely adopted next-generation sequencing platform and proven and published across the broadest range of research applications.",,,,,,,,
http://purl.obolibrary.org/obo/APOLLO_SV_00000243,duration,,A measurement datum that quantifies a temporal region that is occupied by a processual entity.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,APOLLO_SV:00000243,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/apollo_sv.owl,,,,,,,,,duration,,,,,,,,,,,,,,,,,,,,,,,,,,,,Mathias Brochhausen,,,,A measurement datum that quantifies a temporal region that is occupied by a processual entity.,,,,,,,,
http://purl.obolibrary.org/obo/APOLLO_SV_00000240,census reference date,,A information content entity that specifies the date of a census.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,APOLLO_SV:00000240,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/apollo_sv.owl,,,,,,,,,census reference date,,,,,,,,,,,,,,,,,,,,,,,,,,,,Mathias Brochhausen,,,,A information content entity that specifies the date of a census.,,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000561,confidence level,,"the frequency (i.e., the proportion) of possible confidence intervals that contain the true value of their corresponding parameter. In other words, if confidence intervals are constructed using a given confidence level in an infinite number of independent experiments, the proportion of those intervals that contain the true value of the parameter will match the confidence level.
A probability measure of the reliability of an inferential statistical test that has been applied to sample data and which is provided along with the confidence interval for the output statistic.",FALSE,,,,,,,,,,,,,,,,,,,,,"adapted from wikipedia:
https://en.wikipedia.org/wiki/Confidence_interval

and from:
http://www.oxfordreference.com/view/10.1093/acref/9780191792236.001.0001/acref-9780191792236-e-103?rskey=tQCMI6&result=1",,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000561,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,confidence level,,,,,,,,,,,,,,,,,,,,,,,,,,,,Philippe Rocca-Serra,,,,"the frequency (i.e., the proportion) of possible confidence intervals that contain the true value of their corresponding parameter. In other words, if confidence intervals are constructed using a given confidence level in an infinite number of independent experiments, the proportion of those intervals that contain the true value of the parameter will match the confidence level.
A probability measure of the reliability of an inferential statistical test that has been applied to sample data and which is provided along with the confidence interval for the output statistic.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0038746,gastro-epiploic lymph node,lymph node of greater curvature of stomach|jPS No. 4 node|jPS 4 node|gastro-omental node|gastro-omental lymph node|gastro-epiploic node,Gastric lymph node located along the greater curvature of stomach.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:277652,,,,,,,,,,,,,,,,,,,,,,,,,lymph node of greater curvature of stomach|jPS No. 4 node|jPS 4 node|gastro-omental node|gastro-omental lymph node|gastro-epiploic node,,,,UBERON:0038746,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,gastro-epiploic lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Gastric lymph node located along the greater curvature of stomach.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0620,Wayúu,Wayuu|Wayu|Wahiro|Guajiro,Individuals who self-identify or are reported by authors as belonging to the Wayúu indigenous people of the Guajira Peninsula in northernmost part of Colombia and northwest Venezuela.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Wayuu|Wayu|Wahiro|Guajiro,,,,HANCESTRO:0620,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Wayúu,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Individuals who self-identify or are reported by authors as belonging to the Wayúu indigenous people of the Guajira Peninsula in northernmost part of Colombia and northwest Venezuela.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0626,Mapuche,,"Individuals who self-identify or are reported by authors as belonging to a group of indigenous people of present-day south-central Chile and southwestern Argentina, including parts of present-day Patagonia",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0626,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Mapuche,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Individuals who self-identify or are reported by authors as belonging to a group of indigenous people of present-day south-central Chile and southwestern Argentina, including parts of present-day Patagonia",,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0628,Tupiniquim,Tupinã-ki|Tupiniquins|Tupinaquis|Tupinanquins|Topinaquis,"Individuals who self-identify or are reported by authors as belonging to an indigenous people of Brazil, who now live in three indigenous territories (Terras Indígenas in Portuguese), Caieiras Velhas, Pau-Brasil and Comboiosare, located near the cities of Santa Cruz and Vila do Riacho in the municipality of Aracruz in northern Espírito Santo state, southeastern Brazil.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Tupinã-ki|Tupiniquins|Tupinaquis|Tupinanquins|Topinaquis,,,,HANCESTRO:0628,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Tupiniquim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Individuals who self-identify or are reported by authors as belonging to an indigenous people of Brazil, who now live in three indigenous territories (Terras Indígenas in Portuguese), Caieiras Velhas, Pau-Brasil and Comboiosare, located near the cities of Santa Cruz and Vila do Riacho in the municipality of Aracruz in northern Espírito Santo state, southeastern Brazil.",,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0625,Diaguita,,Individuals who self-identify or are reported by authors as belonging to a group of South American indigenous people native to the Chilean Norte Chico and the Argentine Northwest.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0625,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Diaguita,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Individuals who self-identify or are reported by authors as belonging to a group of South American indigenous people native to the Chilean Norte Chico and the Argentine Northwest.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0624,Aymara,Aimara,"Individuals who self-identify or are reported by authors as belonging to a group of indigenous people in the Andes and Altiplano regions of South America; about 2.3 million live in northwest Argentina, Bolivia, Chile and Peru.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Aimara,,,,HANCESTRO:0624,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Aymara,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Individuals who self-identify or are reported by authors as belonging to a group of indigenous people in the Andes and Altiplano regions of South America; about 2.3 million live in northwest Argentina, Bolivia, Chile and Peru.",,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0627,Guaraní,Guaraní-Mbyá,"Individuals who self-identify or are reported by authors as belonging to a group of culturally-related indigenous peoples of South America, living primarily in present-day Paraguay between the Paraná River and lower Paraguay River, the Misiones Province of Argentina, southern Brazil as far east as Rio de Janeiro, and parts of Uruguay and Bolivia.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Guaraní-Mbyá,,,,HANCESTRO:0627,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Guaraní,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Individuals who self-identify or are reported by authors as belonging to a group of culturally-related indigenous peoples of South America, living primarily in present-day Paraguay between the Paraná River and lower Paraguay River, the Misiones Province of Argentina, southern Brazil as far east as Rio de Janeiro, and parts of Uruguay and Bolivia.",,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0621,Piapoco,,Individuals who self-identify or are reported by authors as belonging to an Arawakan ethnolinguistic group in Colombia and Venezuela,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0621,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Piapoco,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Individuals who self-identify or are reported by authors as belonging to an Arawakan ethnolinguistic group in Colombia and Venezuela,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0622,Pastos,,Individuals who self-identify or are reported by authors as belonging to a group of indigenous people native to the Nariño region of southern Colombia and neighbouring Equador,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0622,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Pastos,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Individuals who self-identify or are reported by authors as belonging to a group of indigenous people native to the Nariño region of southern Colombia and neighbouring Equador,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0623,Quechua,Quichua,"Individuals who self-identify or are reported by authors as belonging to a group of indigenous people of South America who speak the Quechua languages. Although most Quechua speakers are native to Peru, there are some significant populations in Ecuador, Bolivia, Chile, Colombia, and Argentina",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Quichua,,,,HANCESTRO:0623,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Quechua,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Individuals who self-identify or are reported by authors as belonging to a group of indigenous people of South America who speak the Quechua languages. Although most Quechua speakers are native to Peru, there are some significant populations in Ecuador, Bolivia, Chile, Colombia, and Argentina",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_38260,pyrrolidines,,Any of a class of heterocyclic amines having a saturated five-membered ring.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:38191|CHEBI:26922,,,,,,CHEBI:38260,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,pyrrolidines,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any of a class of heterocyclic amines having a saturated five-membered ring.,,,,,,,,
http://purl.obolibrary.org/obo/HP_0012337,Abnormal homeostasis,,An anomaly in the processes involved in the maintenance of an internal equilibrium.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4022950|MP:0001764,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0012337,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal homeostasis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An anomaly in the processes involved in the maintenance of an internal equilibrium.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00000458,North America,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00000458,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,North America,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00000459,South America,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00000459,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,South America,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00000457,Africa,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00000457,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Africa,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/TRANS_0000012,vehicle-born ingestion,,"Vehicle-borne ingestion transmission is an indirect vehicle-borne transmission process during which the pathogen is indirectly transferred from a reservoir, source or host to another host by ingestion of fluids or foods or food products including: food, water, milk, or meat products.",FALSE,,,,,,,,,,,,,,,,,,,,,https://www.ebi.ac.uk/ols/ontologies/trans,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,TRANS:0000012,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,vehicle-born ingestion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Vehicle-borne ingestion transmission is an indirect vehicle-borne transmission process during which the pathogen is indirectly transferred from a reservoir, source or host to another host by ingestion of fluids or foods or food products including: food, water, milk, or meat products.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000099,GENEPIO_0000099,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CDC ID,,,,,,GENEPIO:0000099,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001399,symptom onset date,symptom onset date,A data field which describes the date on which the symptoms began or were first noted.,FALSE,,,,,,,PCDS:symptom_onset_date,,,,,,,PCDS: ISO 8601 standard 'YYYY-MM-DD'.,,,,,,,,,,,,,,PCDS: 2024-02-01,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,symptom onset date,symptom onset date slot,,,,GENEPIO:0001399,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,symptom onset date,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the date on which the symptoms began or were first noted.,,PCDS: The date on which the symptoms began or were first noted.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100122,Illumina NovaSeq,,A DNA sequencer manufactured by the Illunina corporation using sequence-by-synthesis chemistry that has an output capacirty of 6 Tb and 20 billion reads in dual flow cell mode.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100122,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,Illumina NovaSeq,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A DNA sequencer manufactured by the Illunina corporation using sequence-by-synthesis chemistry that has an output capacirty of 6 Tb and 20 billion reads in dual flow cell mode.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530134,marcreuse,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0134,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530134,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,marcreuse,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_61800,2-deoxystreptamine derivative,,Any derivative of 2-deoxystreptamine.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:61800,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,2-deoxystreptamine derivative,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any derivative of 2-deoxystreptamine.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00002805,Province (Republic of Korea),,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00002805,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Province (Republic of Korea),http://purl.obolibrary.org/obo/GAZ_00002802,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490426,peel-off lid,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0426,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490426,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,peel-off lid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001183,taxonomic datum,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001183,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,taxonomic datum,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490173,paper wrapper,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0173,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490173,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,paper wrapper,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510134,"\""source of\""label claim",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0134,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510134,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"""source of""label claim",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001571,contig count QC threshold,,"The upper threshold of contig counts that are acceptable in a genome assembly.  This may vary based on the overall genome length and depth of coverage.

A large contig count may indicate insufficient read coverage.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001571,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,contig count QC threshold,,,,,Assembly QC,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"The upper threshold of contig counts that are acceptable in a genome assembly.  This may vary based on the overall genome length and depth of coverage.

A large contig count may indicate insufficient read coverage.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000087,beef flat iron steak,,"A steak cut from the top blade, where the cutting method removes internal connective tissue from the whole Top Blade.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000087,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef flat iron steak,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A steak cut from the top blade, where the cutting method removes internal connective tissue from the whole Top Blade.",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0013765,digestive system element,digestive system organ|digestive organ,"Any of the organs or elements that are part of the digestive system. Examples: tongue, esophagus, spleen, crop, lunge feeding organ, tooth elements.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SCTID:272627002|EMAPA:37843,,,,,,,,,,,,,,,,,,,,,,,,,digestive system organ|digestive organ,,,,UBERON:0013765,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,digestive system element,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Any of the organs or elements that are part of the digestive system. Examples: tongue, esophagus, spleen, crop, lunge feeding organ, tooth elements.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100064,cyanotic lips,bluish lips,Persistent blue discoloration of the lips.,FALSE,,,,,,,Cyanotic lips (bluish lips),,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,bluish lips,,,,GENEPIO:0100064,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,cyanotic lips,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Persistent blue discoloration of the lips.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03500051,food contact surface from human-made material,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=N0051,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03500051,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food contact surface from human-made material,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://www.ebi.ac.uk/efo/EFO_0021783,age at medical procedure,age at procedure|age at medical intervention|age at intervention,Age at the time of a specific medical procedure or intervention intended to alter the course of a disease.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,age at procedure|age at medical intervention|age at intervention,,,,efo:EFO_0021783,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age at medical procedure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Age at the time of a specific medical procedure or intervention intended to alter the course of a disease.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470124,osmotic dehydration,,Reduction of water in the product by osmosis.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0124,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470124,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,osmotic dehydration,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Reduction of water in the product by osmosis.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000137,coastal inlet,,An opening of the sea into the land.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,TGN:21128|FTT:463,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00000137,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,envoPolar,,,,,,,,coastal inlet,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An opening of the sea into the land.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000202,beef shank center cut (raw),,A raw beef shank center-cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000202,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef shank center cut (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef shank center-cut.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100593,obsolete: specimen storage temperature,,,TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,Domain appropriate replacement identified in OBIB,,,,,,,,,,,,,,,,,,,GENEPIO:0100593,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: specimen storage temperature,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/OBIB_0000689,,,,,,,,,,,
http://purl.obolibrary.org/obo/IAO_0000003,measurement unit label,,A measurement unit label is as a label that is part of a scalar measurement datum and denotes a unit of measure.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"2009-03-16: review of this term done during during the OBI workshop winter 2009 and the current definition was considered acceptable for use in OBI. If there is a need to modify this definition please notify OBI.|2009-03-16: provenance: a term measurement unit was
proposed for OBI (OBI_0000176) , edited by Chris Stoeckert and
Cristian Cocos, and subsequently moved to IAO where the objective for
which the original term was defined was satisfied with the definition
of this, different, term.",measurement unit label,,,,,http://purl.obolibrary.org/obo/IAO_0000125,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,IAO:0000003,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/iao.owl,,,,,,,,,measurement unit label,,,,,,,,,,,,,,,,,,,,,,,,,,,,PERSON: Melanie Courtot|PERSON: Alan Ruttenberg,,,,A measurement unit label is as a label that is part of a scalar measurement datum and denotes a unit of measure.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002102,obsolete: antimicrobial resistance tissue specificity,,"The tissue type used to select breakpoints from a particular standard, for the interpretation of MIC results.",TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002102,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: antimicrobial resistance tissue specificity,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,http://purl.obolibrary.org/obo/ARO_3004430,,,"The tissue type used to select breakpoints from a particular standard, for the interpretation of MIC results.",,,,,,,,
http://purl.obolibrary.org/obo/HP_0034033,Peripheral cyanosis,,"Bluish discoloration of the distal extremities in the absence of cold temperature or stress. Peripheral cyanosis can involve hands, fingertips, or toes, and sometimes circumoral and periorbital areas. Mucous membranes are generally not involved.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HP:0034033,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Peripheral cyanosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Bluish discoloration of the distal extremities in the absence of cold temperature or stress. Peripheral cyanosis can involve hands, fingertips, or toes, and sometimes circumoral and periorbital areas. Mucous membranes are generally not involved.",,,,,,,,
http://purl.obolibrary.org/obo/HP_0034031,Facial cyanosis,Cyanotic face|Bluish face,Bluish discoloration of one or more regions of the face.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Cyanotic face|Bluish face,,,,HP:0034031,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Facial cyanosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Bluish discoloration of one or more regions of the face.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_26195,polyphenol,,Members of the class of phenols that contain 2 or more benzene rings each of which is substituted by at least one hydroxy group.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:26195,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,polyphenol,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Members of the class of phenols that contain 2 or more benzene rings each of which is substituted by at least one hydroxy group.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00004488,pork retail cut,,"A pork meat cut that is derived from a sub-primal, individual muscle cut or minor primal cut.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00004488,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pork retail cut,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A pork meat cut that is derived from a sub-primal, individual muscle cut or minor primal cut.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510132,"\""light\""label claim",,"A claim stating that a product is ""light"" or ""lite"", and any claim likely to have the same meaning for the consumer, shall follow the same conditions as those set for the term ""reduced"", see *REDUCED {NAME OF NUTRIENT} NUTRITION CLAIM [P0132]*; the claim shall also be accompanied by an indication of the characteristic(s) which make(s) the food ""light"" or ""lite"" [REGULATION (EC) No 1924/2006 Corrigendum 2007-01-18].

Used for foods that have 33.3% fewer calories than a comparable product and a minimum reduction of more than 40 calories per serving. Any other use of 'light' must specify whether it refers to the look, taste or smell; for example, 'light in color'. (U.S. FDA proposed)",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0132,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510132,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"""light""label claim",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A claim stating that a product is ""light"" or ""lite"", and any claim likely to have the same meaning for the consumer, shall follow the same conditions as those set for the term ""reduced"", see *REDUCED {NAME OF NUTRIENT} NUTRITION CLAIM [P0132]*; the claim shall also be accompanied by an indication of the characteristic(s) which make(s) the food ""light"" or ""lite"" [REGULATION (EC) No 1924/2006 Corrigendum 2007-01-18].

Used for foods that have 33.3% fewer calories than a comparable product and a minimum reduction of more than 40 calories per serving. Any other use of 'light' must specify whether it refers to the look, taste or smell; for example, 'light in color'. (U.S. FDA proposed)",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0004324,BGI Genomics platform,,A sequencing platform provided by the BGI Genomics company.,FALSE,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/BGI_Group,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0004324,,,,,,,,,,,,,https://orcid.org/0000-0001-5275-8866,2022-09-23T11:41:23Z,,,,,,,,,,,,,,,,,,,BGI Genomics platform,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A sequencing platform provided by the BGI Genomics company.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_39270,naphthofuran,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:39270,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,naphthofuran,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C25164,Date,date|Dated|Date (MM/DD/YYYY)|Date,"The particular day, month and year an event has happened or will happen.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,date|Dated|Date (MM/DD/YYYY)|Date,,,,NCIT:C25164,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Date,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The particular day, month and year an event has happened or will happen.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490365,"polyester container, glass fibre strengthened",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0365,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490365,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"polyester container, glass fibre strengthened",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100269,parent-guardian role,parent of caserole|guardian of case role,A role inhering in a person that is realized when the bearer is a caregiver of the offspring of their own species.,FALSE,,,,,,,Parent of case,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Parent,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,parent of caserole|guardian of case role,,,,GENEPIO:0100269,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,parent-guardian role,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A role inhering in a person that is realized when the bearer is a caregiver of the offspring of their own species.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100452,host (food production name),host (breed),"A host field which describes the name of the host at a certain stage of food production, which may depend on its age or stage of sexual maturity.",FALSE,,,,,,,PCDS:host_food_production_name,,,,,,,PCDS: Select the host's food production name from the pick list.,,,,,,,,,,,,,,PCDS: Calf [FOODON:03411349],,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,host (breed),host (breed) slot,,,,GENEPIO:0100452,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,host (food production name),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A host field which describes the name of the host at a certain stage of food production, which may depend on its age or stage of sexual maturity.",,"PCDS: The name of the host at a certain stage of food production, which may depend on its age or stage of sexual maturity.",,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001633,contig L50,,"An assembly quality control datum which is defined as number of contigs equal to or longer than the contig N50, when the assembly itself is factored into the calculation.",FALSE,,,,,,,,,,,,,,,,,,,,,QUAST manual,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001633,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,contig L50,,,,,Assembly QC,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"An assembly quality control datum which is defined as number of contigs equal to or longer than the contig N50, when the assembly itself is factored into the calculation.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00004541,buffalo primal cut,,A cut of meat that is initially separated from the carcass of a buffalo during butchering.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00004541,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,buffalo primal cut,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A cut of meat that is initially separated from the carcass of a buffalo during butchering.,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0021118,intestinal neoplasm,tumour of the intestines|tumour of intestines|tumour of intestine|tumor of the intestines|tumor of intestines|tumor of intestine|neoplasm of the intestines|neoplasm of intestines|neoplasm of intestine|intestine tumour|intestine tumor|intestine neoplasm (disease)|intestine neoplasm|intestinal tumours|intestinal tumour|intestinal tumors|intestinal tumor|intestinal neoplasms|intestinal neoplasm,A benign or malignant neoplasm involving the small or large intestine.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0021841|SCTID:126769007|ONCOTREE:BOWEL|NCIT:C3141|MEDGEN:43932|DOID:4610,,,,,,,,,,,,,,,,,,,,,,,,,tumour of the intestines|tumour of intestines|tumour of intestine|tumor of the intestines|tumor of intestines|tumor of intestine|neoplasm of the intestines|neoplasm of intestines|neoplasm of intestine|intestine tumour|intestine tumor|intestine neoplasm (disease)|intestine neoplasm|intestinal tumours|intestinal tumour|intestinal tumors|intestinal tumor|intestinal neoplasms|intestinal neoplasm,,,,MONDO:0021118,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,intestinal neoplasm,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A benign or malignant neoplasm involving the small or large intestine.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03430108,"physical state, shape or form, multiple",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=E0108,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03430108,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"physical state, shape or form, multiple",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_33661,monocyclic compound,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:33661,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,monocyclic compound,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C161601,Surgical Procedure by Type,Surgical Procedure by Type|PROCEDURE_TYPE,A categorization of surgical procedures by type or purpose.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Surgical Procedure by Type|PROCEDURE_TYPE,,,,NCIT:C161601,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Surgical Procedure by Type,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A categorization of surgical procedures by type or purpose.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470155,preservation by adding organic acids or salts,,"Preservation by adding organic acids or salts (e.g. lactic acid, acetic acid, salicylic acid) to suppress or inhibit undesirable micro organisms or enzyme activity.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0155,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470155,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,preservation by adding organic acids or salts,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Preservation by adding organic acids or salts (e.g. lactic acid, acetic acid, salicylic acid) to suppress or inhibit undesirable micro organisms or enzyme activity.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000294,porterhouse chop,,A pork loin chop from the center cut loin. The cut location is adjacent to but after the T-Bone chop and before the Sirloin portion on the Loin.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000294,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,porterhouse chop,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A pork loin chop from the center cut loin. The cut location is adjacent to but after the T-Bone chop and before the Sirloin portion on the Loin.,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0002046,alcohol abuse,alcohol abuse,"The use of alcoholic beverages to excess, either on individual occasions (""binge drinking"") or as a regular practice.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0085762|SCTID:15167005|MESH:D000437|MEDGEN:39339|ICD9:305.00|ICD9:305.0|ICD10CM:F10.1|DOID:1574,,,,,,,,,,,,,,,,,,,,,,,,,alcohol abuse,,,,MONDO:0002046,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,alcohol abuse,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The use of alcoholic beverages to excess, either on individual occasions (""binge drinking"") or as a regular practice.",,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00002221,shop,retailer|retail store|retail shop,A building in which a business presents a selection of goods and offers to trade or sell them to customers for money or other goods.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Shopping,,,,,,,,,,,,,,,,,,,,,,,,,retailer|retail store|retail shop,,,,ENVO:00002221,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,shop,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A building in which a business presents a selection of goods and offers to trade or sell them to customers for money or other goods.,,,,,,,,
http://purl.obolibrary.org/obo/GO_0044419,biological process involved in interspecies interaction between organisms,interspecies interaction with other organisms|interspecies interaction between organisms|interspecies interaction|interaction with another species,Any process evolved to enable an interaction with an organism of a different species.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Reactome:R-HSA-9824443,,,,,,,,,,,,,,,,,,,,,,,,,interspecies interaction with other organisms|interspecies interaction between organisms|interspecies interaction|interaction with another species,,,,GO:0044419,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/apollo_sv.owl,http://purl.oboInOwllibrary.org/oboInOwl/go#goslim_pir|http://purl.oboInOwllibrary.org/oboInOwl/go#goslim_candida|http://purl.oboInOwllibrary.org/oboInOwl/go#gocheck_do_not_annotate,,,,,,,,biological process involved in interspecies interaction between organisms,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any process evolved to enable an interaction with an organism of a different species.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000178,beef flank steak (raw),,A raw beef flank steak.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000178,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef flank steak (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef flank steak.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001678,draft GenEpiO case epidemiology record,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001678,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,draft GenEpiO case epidemiology record,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00003688,Yorkshire and the Humber,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00003688,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Yorkshire and the Humber,http://purl.obolibrary.org/obo/GAZ_00002641,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00003687,North West Region,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00003687,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,North West Region,http://purl.obolibrary.org/obo/GAZ_00002641,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00003689,North East Region,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00003689,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,North East Region,http://purl.obolibrary.org/obo/GAZ_00002641,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03470122,preservation by ionizing radiation,,"Preservation by irradiation, primarily by gamma radiation.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=J0122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03470122,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,preservation by ionizing radiation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Preservation by irradiation, primarily by gamma radiation.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0102157,PacBio Sequel IIe,,"A PacBio sequencing instrument model which utilizes single-molecule real-time (SMRT) sequencing technology to generate long-read sequences with high accuracy, facilitating comprehensive genomic analyses.",FALSE,,,,,,,,,,,,,,,,,,,,,https://www.pacb.com/technology/hifi-sequencing/sequel-system/,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0102157,,,,,,,,,,,,,https://orcid.org/0000-0002-7654-6902|https://orcid.org/0000-0001-8008-8249,2025-03-21T01:14:47.111Z,,,,,,,,,,,,,,,,,,,PacBio Sequel IIe,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A PacBio sequencing instrument model which utilizes single-molecule real-time (SMRT) sequencing technology to generate long-read sequences with high accuracy, facilitating comprehensive genomic analyses.",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C49685,Adult 18-65 Years Old,Adult 18-65 Years Old|Adult (18-65),An age group comprised of individuals from 18 years to 65 years of age.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Adult 18-65 Years Old|Adult (18-65),,,,NCIT:C49685,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Adult 18-65 Years Old,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An age group comprised of individuals from 18 years to 65 years of age.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000027,beef sirloin tip roast,,A roast cut from the beef sirloin tip.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000027,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef sirloin tip roast,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A roast cut from the beef sirloin tip.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_64709,organic acid,,Any organic molecular entity that is acidic and contains carbon in covalent linkage.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:64709,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,organic acid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any organic molecular entity that is acidic and contains carbon in covalent linkage.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02021414,piece of deer,,A severed part of a deer.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02021414,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of deer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A severed part of a deer.,,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0021205,disorder of ear,ear disease or disorder|ear disease|disorder of ear|disease or disorder of ear|disease of ear|Ear disorder|Ear disease,A disease that involves the ear.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0013447|SCTID:25906001|NCIT:C26757|MEDGEN:3946|ICD9:388.9|ICD9:388.8,,,,,,,,,,,,,,,,,,,,,,,,,ear disease or disorder|ear disease|disorder of ear|disease or disorder of ear|disease of ear|Ear disorder|Ear disease,,,,MONDO:0021205,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#otar,,,,,,,,disorder of ear,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A disease that involves the ear.,,,,,,,,
http://purl.obolibrary.org/obo/ARO_3004409,Trek,Thermo Fisher Scientific,"Specific vendor of automated system of analysis for determining antimicrobial susceptibility that was acquired by Thermo Fisher Scientific Inc. Thermo Fisher Scienfiic Inc. is headquartered in Massachusetts, USA.  Trek is the developer of the Sensitire automated testing platform.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Thermo Fisher Scientific,,,,ARO:3004409,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/aro.owl,,,,,,,,,Trek,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Specific vendor of automated system of analysis for determining antimicrobial susceptibility that was acquired by Thermo Fisher Scientific Inc. Thermo Fisher Scienfiic Inc. is headquartered in Massachusetts, USA.  Trek is the developer of the Sensitire automated testing platform.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001159,sequence submitted by,sequence_submitted_by|sequence submitted by,A data field which describes the name of the agency that submitted the sequence to a database.,FALSE,,,,,,,PCDS:sequence_submitted_by,,,,,,,"PCDS: The name of the agency should be written out in full, (with minor exceptions) and be consistent across multiple submissions.",,,,,,,,,,,Not to be confused with 'sequenced by' http://purl.obolibrary.org/obo/GENEPIO_0100416,,,PCDS: Public Health Ontario (PHO),,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,sequence_submitted_by|sequence submitted by,sequence submitted by slot,,,,GENEPIO:0001159,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,sequence submitted by,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the name of the agency that submitted the sequence to a database.,,PCDS: The name of the agency that generated the sequence.,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490267,"ceramic or earthenware jar, uncoloured",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0267,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490267,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"ceramic or earthenware jar, uncoloured",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_7427,anthrax disease,,"A primary bacterial infectious disease that results_in infection located_in skin, located_in lung lymph nodes or located_in gastrointestinal tract, has_material_basis_in Bacillus anthracis, transmitted_by contact with infected animals or animal products, transmitted_by airborne spores or transmitted_by ingestion of undercooked meat from infected animals and has_symptom skin ulcer, has_symptom nausea, has_symptom poor appetite, has_symptom bloody diarrhea, has_symptom fever or has_symptom shortness of breath.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:7427,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,anthrax disease,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A primary bacterial infectious disease that results_in infection located_in skin, located_in lung lymph nodes or located_in gastrointestinal tract, has_material_basis_in Bacillus anthracis, transmitted_by contact with infected animals or animal products, transmitted_by airborne spores or transmitted_by ingestion of undercooked meat from infected animals and has_symptom skin ulcer, has_symptom nausea, has_symptom poor appetite, has_symptom bloody diarrhea, has_symptom fever or has_symptom shortness of breath.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100907,total daily flow rate measurement method,total daily flow rate measurement method,An environmental data field which describes the process used to measure the total flow rate over the course of a day.,FALSE,,,,,,,PCDS:total_daily_flow_rate_measurement_method,,,,,,,PCDS: Provide the name of the procedure or technology used to measure flow rate.,,,,,,,,,,,,,,PCDS: Flow meter,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,total daily flow rate measurement method,total daily flow rate measurement method slot,,,,GENEPIO:0100907,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,total daily flow rate measurement method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the process used to measure the total flow rate over the course of a day.,,PCDS: The process used to measure total daily fluid flow rate.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001082,Salmonella antigenic formula,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001082,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/NCBITaxon_590,,,,,,Salmonella antigenic formula,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00013864,"populated place, Burkina Faso",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00013864,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Burkina Faso",http://purl.obolibrary.org/obo/GAZ_00000905,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02010315,"animal roast (boneless, raw)",,A raw and boneless animal roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02010315,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"animal roast (boneless, raw)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw and boneless animal roast.,,,,,,,,
http://purl.obolibrary.org/obo/OMIT_0006010,Enterotoxins,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OMIT:0006010,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/omit.owl,,,,,,,,,Enterotoxins,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03450037,food reheating,,A process to bring an already fully cooked product to serving temperature.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=G0037,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03450037,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food reheating,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A process to bring an already fully cooked product to serving temperature.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0002787,face mask,,A personal protective device worn over the nose and mouth as a respiratory filter to inhibit the flow of particles.,FALSE,,,,,,,respirator|face covering,,,,,,,,,,,,,,Adapted from https://dictionary.cambridge.org/dictionary/english/face-mask,,,,,face mask,,A systematic review on the efficacy of face coverings against respiratory viruses analyzed 19 randomized trials and concluded that use of face masks and respirators appeared to be protective in both health care and community settings,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0002787,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,face mask,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://orcid.org/0000-0002-8844-9165,,,https://github.com/obi-ontology/obi/issues/1193,A personal protective device worn over the nose and mouth as a respiratory filter to inhibit the flow of particles.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_36962,organochalcogen compound,,An organochalcogen compound is a compound containing at least one carbon-chalcogen bond.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:36962,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,organochalcogen compound,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An organochalcogen compound is a compound containing at least one carbon-chalcogen bond.,,,,,,,,
http://purl.obolibrary.org/obo/COB_0000013,molecule,,A material entity that consists of two or more atoms that are all connected via covalent bonds such that any atom can be transitively connected with any other atom.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,COB:0000013,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/cob.owl,,,,,,,,,molecule,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A material entity that consists of two or more atoms that are all connected via covalent bonds such that any atom can be transitively connected with any other atom.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_52211,physiological role,,A biological role relating to the normal mechanisms and their interactions within a living system.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:52211,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,physiological role,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A biological role relating to the normal mechanisms and their interactions within a living system.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100285,sample plan name,sample plan name,A data field which describes the name of the sample plan implemented for sample collection.,FALSE,,,,,,,PCDS:sample_plan_name,,,,,,,PCDS: Provide the name and version of the sample plan outlining the sample strategy.,,,,,,,,,,,,,,PCDS: CanCOGeN Sampling Strategy 1.0,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,sample plan name,GENEPIO:0100430,,,,GENEPIO:0100285,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,sample plan name,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the name of the sample plan implemented for sample collection.,,PCDS: The name of the study design for a surveillance project.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001253,specimen processing,specimen_processing|specimen processing,A data field which describes any processing applied to the sample during or after receiving the sample.,FALSE,,,,,,,PCDS:specimen_processing,,,,,,,PCDS: Select processes from the picklist that were applied to this sample.,,,,,,,,,,,(2026-03-29): At least one pathogen-genomics-package specification accidently used a new ID [GENEPIO:0001253] for this class. The ID is not associated with any other classes so it has been added as a skosexactMatch to help with linkage for effected users.,,,PCDS: Virus passage,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,specimen_processing|specimen processing,GENEPIO:0100435,,,,GENEPIO:0001253,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,specimen processing,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes any processing applied to the sample during or after receiving the sample.,,PCDS: Any processing applied to the sample during or after receiving the sample.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002099,obsolete: non-wild type (NWT),,A non-wild type (WT) resistance phenotype indicates a bacterial pathogen has an acquired or mutational resistance mechanism present with respect to the antimicrobial in question. The bacteria has a reduced susceptibility to this agent.,TRUE,,,,,,,,,,,,,,,,,,,,,https://sisu.ut.ee/sites/default/files/amr/files/pab_new_legislation_on_amr.pdf,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002099,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: non-wild type (NWT),,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,http://purl.obolibrary.org/obo/ARO_3004433,,,A non-wild type (WT) resistance phenotype indicates a bacterial pathogen has an acquired or mutational resistance mechanism present with respect to the antimicrobial in question. The bacteria has a reduced susceptibility to this agent.,,,,,,,,
http://semanticscience.org/resource/SIO_000512,line segment,,A line segment is a line and a part of a curve that is (inclusively) bounded by two terminal points.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,resource:SIO_000512,,,,,,,,,,,,,,,,,,,,,,,,http://semanticscience.org/resource/SIO_000512,,,,,,,,,line segment,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A line segment is a line and a part of a curve that is (inclusively) bounded by two terminal points.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490326,regenerated cellulose film,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0326,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490326,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,regenerated cellulose film,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0004045,tailgut,,"The extension of the hindgut of the primitive digestive tube of the embryo, caudal to the location of the anal opening.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,EMAPA:36331,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0004045,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,tailgut,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The extension of the hindgut of the primitive digestive tube of the embryo, caudal to the location of the anal opening.",,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00002007,sediment,,Particulate environmental material which is formed as a result of the transport and deposition of particles by flowing liquid.,FALSE,,,,,,,,,,,,,,Sediment is typically deposited on the bed or bottom of a body of water or other liquid.,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Sediment|SWEETRealm:Sediment|LTER:493|LTER:492|EcoLexicon:sedimentation|EcoLexicon:sediment,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00002007,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,envoPolar|http://purl.oboInOwllibrary.org/oboInOwl/envo#EnvO-Lite-GSC,,,,,,,,sediment,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Particulate environmental material which is formed as a result of the transport and deposition of particles by flowing liquid.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_16301,nitrite,,The nitrogen oxoanion formed by loss of a proton from nitrous acid.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:7585|CHEBI:44396|CHEBI:14658,,,,,,CHEBI:16301,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,nitrite,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The nitrogen oxoanion formed by loss of a proton from nitrous acid.,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000056,Maasai,,A Nilotic Eastern population with a population size of 0.9 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000056,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Maasai,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Nilotic Eastern population with a population size of 0.9 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000057,Samburu,,A Nilotic Eastern population with a population size of 0.1 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000057,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Samburu,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Nilotic Eastern population with a population size of 0.1 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000058,Tiv,,A Bantu Western population with a population size of 3.8 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000058,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Tiv,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Bantu Western population with a population size of 3.8 millions,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000023,isolate received date,,A date which describes when a laboratory received an isolate.,FALSE,,,,,,,,,,,,,,,,,,,,,NML LIMS,,,,,,,year/month/day,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000023,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/genepio/core_slim.owl,,,,,,,,isolate received date,,,,,Collection,,,,,,,,,,,,,,,,,,,,,,Received date,,,NML Labware LIMS,,A date which describes when a laboratory received an isolate.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00001412,Falkland Islands,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,INSDC:country:falkland islands (islas malvinas),,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00001412,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/gaz.owl,,,,,,,,,Falkland Islands,http://purl.obolibrary.org/obo/GAZ_00051082|http://purl.obolibrary.org/obo/GAZ_00000459,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_17630,kanamycin A,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:6106|CHEBI:43482|CHEBI:28008|CHEBI:24947|CHEBI:24945|CHEBI:14487,,,,,,CHEBI:17630,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,kanamycin A,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100581,Environmental Pathogen Attribute Package (Pathogen.env),,"A collection of contextual data attributes pertaining to a pathogen in an environmental sample, as specified by the International Nucleotide Sequence Database Collaboration (INSDC).",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100581,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135,2022-09-23T10:54:21Z,,,,,,,,,,,,,,,,,,,Environmental Pathogen Attribute Package (Pathogen.env),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A collection of contextual data attributes pertaining to a pathogen in an environmental sample, as specified by the International Nucleotide Sequence Database Collaboration (INSDC).",,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0034945,excreted gas,,Any gaseous product of an excretory process.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0034945,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,excreted gas,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any gaseous product of an excretory process.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0034944,zone of organ,organ zone|organ zonal region|organ sector,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FMA:55268,,,,,,,,,,,,,,,,,,,,,,,,,organ zone|organ zonal region|organ sector,,,,UBERON:0034944,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,zone of organ,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0034946,gas excreted from digestive tract,intestinal gas|flatus|flatulence,Any excreted gas that is produced by the digestive tract.,FALSE,,,,,,,,,,,,,,"In mammals, mostly produced as a byproduct of bacterial fermentation in the gastrointestinal (GI) tract, especially the colon, and excreted through the rectum",,,,,,,,,,,,,,,,,,FMA:78440,,,,,,,,,,,,,,,,,,,,,,,,,,intestinal gas|flatus|flatulence,,,UBERON:0034946,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,gas excreted from digestive tract,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any excreted gas that is produced by the digestive tract.,,,,,,,,
http://purl.obolibrary.org/obo/OMIT_0019904,Diagnostic Techniques and Procedures,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OMIT:0019904,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/omit.owl,,,,,,,,,Diagnostic Techniques and Procedures,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000110,beef chuck arm steak (raw),,A raw beef chuck arm steak.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000110,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef chuck arm steak (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef chuck arm steak.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001481,fast5 filepath,fast5 filepath,A data field which describes the filepath of the FAST5 file.,FALSE,,,,,,,PCDS:fast5_filepath,,,,,,,PCDS: Provide the filepath of the FAST5 file.,,,,,,,,,,,,,,PCDS: /User/Documents/RespLab/Data/mev123seq.fast5,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,fast5 filepath,fast5 filepath slot,,,,GENEPIO:0001481,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,fast5 filepath,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the filepath of the FAST5 file.,,PCDS: The filepath of the FAST5 file.,,,,,,
http://purl.obolibrary.org/obo/NCIT_C42709,Parent,Parental|Parent|PARENT,A mother or a father; an immediate progenitor.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Parental|Parent|PARENT,,,,NCIT:C42709,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Parent,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A mother or a father; an immediate progenitor.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_35692,dicarboxylic acid,,Any carboxylic acid containing two carboxy groups.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:4501|CHEBI:36172|CHEBI:23692,,,,,,CHEBI:35692,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,dicarboxylic acid,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any carboxylic acid containing two carboxy groups.,,,,,,,,
http://purl.obolibrary.org/obo/TRANS_0000006,congenital,,Congenital transmission is a direct transmission process during which the pathogen is transmitted directly from mother to child at or around the time of birth.,FALSE,,,,,,,,,,,,,,,,,,,,,https://www.ebi.ac.uk/ols/ontologies/trans,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,TRANS:0000006,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,congenital,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Congenital transmission is a direct transmission process during which the pathogen is transmitted directly from mother to child at or around the time of birth.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000085,beef top blade steak,,A beef steak cut that is end-to-end from the whole top blade.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000085,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef top blade steak,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A beef steak cut that is end-to-end from the whole top blade.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_07000054,"populated place, Syria",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:07000054,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Syria",http://purl.obolibrary.org/obo/GAZ_00002474,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510128,organic food claim,,"USA:
The 1990 Farm Act specifies that a food labeled 'organic' must meet four requirements:  1) the food must be raised by specified methods to replenish and maintain the fertility of the soil; 2) the food must be certified as having been produced with a nationally approved list of materials and practices; 3) to be eligible for certification at least three years must have elapsed between the first organic harvest and first use of nationally approved materials on land and crops;and 4) organic foods must meet all local, state and federal regulations governing the quality and safety of the food supply.

Europe:
Foods produced in accordance with Council Regulation (EC) No 834/2007
of 28 June 2007 on organic production and labelling of organic products and repealing Regulation (EEC) No 2092/91. [http://eur-lex.europa.eu/LexUriServ/LexUriServ.do?uri=OJ:L:2007:189:0001:0023:EN:PDF]",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0128,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510128,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,organic food claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"USA:
The 1990 Farm Act specifies that a food labeled 'organic' must meet four requirements:  1) the food must be raised by specified methods to replenish and maintain the fertility of the soil; 2) the food must be certified as having been produced with a nationally approved list of materials and practices; 3) to be eligible for certification at least three years must have elapsed between the first organic harvest and first use of nationally approved materials on land and crops;and 4) organic foods must meet all local, state and federal regulations governing the quality and safety of the food supply.

Europe:
Foods produced in accordance with Council Regulation (EC) No 834/2007
of 28 June 2007 on organic production and labelling of organic products and repealing Regulation (EEC) No 2092/91. [http://eur-lex.europa.eu/LexUriServ/LexUriServ.do?uri=OJ:L:2007:189:0001:0023:EN:PDF]",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_33635,polycyclic compound,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:33635,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,polycyclic compound,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00004544,buffalo retail cut,,"A buffalo meat cut that is derived from a sub-primal, individual muscle cut or minor primal cut.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00004544,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,buffalo retail cut,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A buffalo meat cut that is derived from a sub-primal, individual muscle cut or minor primal cut.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02010308,animal sub-primal cut (raw),,A raw animal sub-primal cut.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02010308,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,animal sub-primal cut (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw animal sub-primal cut.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_63697,pyrrolidinopiperidine,,Any organic heterobicyclic compound containing <em>ortho</em>-fused pyrrolidine and piperidine rings.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:63697,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,pyrrolidinopiperidine,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Any organic heterobicyclic compound containing <em>ortho</em>-fused pyrrolidine and piperidine rings.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100929,PONAR grab sampler,,"A specimen collection device that is designed to collect sediment samples from the hard bottoms of a body of water i.e. sand, gravel, consolidated marl or clay.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100929,,,,,,,,,,,,,https://orcid.org/0000-0001-5275-8866,2023-11-29T14:21:43Z,,,,,,,,,,,,,,,,,,,PONAR grab sampler,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A specimen collection device that is designed to collect sediment samples from the hard bottoms of a body of water i.e. sand, gravel, consolidated marl or clay.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100010,re-infection surveillance strategy,,"A priority surveillance strategy in which a population that previously tested positive for a disease of interest, and since confirmed to have recovered via a negative test, are monitored for positive test indication of re-infection with the disease of interest within a defined period of time.",FALSE,,,,,,,Re-infection surveillance,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100010,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,re-infection surveillance strategy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A priority surveillance strategy in which a population that previously tested positive for a disease of interest, and since confirmed to have recovered via a negative test, are monitored for positive test indication of re-infection with the disease of interest within a defined period of time.",,,,,,,,
http://purl.obolibrary.org/obo/SO_0000143,assembly_component,assembly component,A region of known length which may be used to manufacture a longer region.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,assembly component,,,,SO:0000143,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/so.owl,http://purl.oboInOwllibrary.org/oboInOwl/so#SOFA,,,,,,,,assembly_component,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A region of known length which may be used to manufacture a longer region.,,,,,,,,
http://purl.obolibrary.org/obo/SO_0000149,contig,,"A contiguous sequence derived from sequence assembly. Has no gaps, but may contain N's from unavailable bases.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,http://en.wikipedia.org/wiki/Contig,,,,,,,http://purl.obolibrary.org/obo/UO_0000244,,,,,,,,,,,,,,,,,,,,,,SO:0000149,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/so.owl,http://purl.oboInOwllibrary.org/oboInOwl/so#SOFA,,,,,,,,contig,,,http://purl.obolibrary.org/obo/SO_0001462,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,"A contiguous sequence derived from sequence assembly. Has no gaps, but may contain N's from unavailable bases.",,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000161,Dyula,,A Mande Western population with a population size of 6.8 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000161,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Dyula,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Mande Western population with a population size of 6.8 millions,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000168,Bihari Mauritian,,A Eastern African population with a population size of 1.2 millions,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000168,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Bihari Mauritian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Eastern African population with a population size of 1.2 millions,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100800,total solids ts measurement value,total solids (TS) measurement value,An environmental data field which describes the numerical value from a total solids (TS) test.,FALSE,,,,,,,PCDS:total_solids_ts_measurement_value,,,,,,,PCDS: Provide the numerical value of the measured TS.,,,,,,,,,,,,,,PCDS: 10,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,total solids (TS) measurement value,total solids (TS) measurement value slot,,,,GENEPIO:0100800,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,total solids ts measurement value,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the numerical value from a total solids (TS) test.,,PCDS: The numerical value from a total solids (TS) test.,,,,,,
http://purl.obolibrary.org/obo/FOODON_03601062,hormone-free food product claim,,A label claim that no natural or synthetic hormones were added during the production of a food product.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03601062,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,hormone-free food product claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A label claim that no natural or synthetic hormones were added during the production of a food product.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000067,beef denver roast,,A roast cut in which under blade with other muscles and connective tissue are removed and either left whole or portioned.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000067,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef denver roast,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A roast cut in which under blade with other muscles and connective tissue are removed and either left whole or portioned.,,,,,,,,
http://purl.obolibrary.org/obo/OBI_0001141,individual organism identifier,,a CRID symbol used to distinguish one individual organism from another.,FALSE,,,,,,,,,,,,,,,,,,,,,MO_169 Individual,,,,,individual organism identifier,,,,,http://purl.obolibrary.org/obo/IAO_0000120,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,OBI:0001141,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/COB_0000022,,,,,,individual organism identifier,,,,,,,,,,,,,,,,,,,,,,,,,,,,"PERSON: Chris Stoeckert, Jie Zheng",,,,a CRID symbol used to distinguish one individual organism from another.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000091,beach,lagoon beach|beach berm,"A landform consisting of loose rock particles such as sand, gravel, shingle, pebbles, cobble, or even shell fragments along the shoreline of a body of water.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Beach|TGN:21482|SWEETRealm:Beach|Geonames:T.BCHS|Geonames:T.BCH|FTT:239|FTT:237|EcoLexicon:to_beach|EcoLexicon:beach,,,,,,,,,,,,,,,,,,,,,,,,,Beach,lagoon beach|beach berm,,,ENVO:00000091,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,beach,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A landform consisting of loose rock particles such as sand, gravel, shingle, pebbles, cobble, or even shell fragments along the shoreline of a body of water.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_3044,food allergy,,"A hypersensitivity reaction type I disease that is an abnormal response to a food, triggered by the body's immune system.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:3044,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,food allergy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A hypersensitivity reaction type I disease that is an abnormal response to a food, triggered by the body's immune system.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000295,porterhouse chop (raw),,A raw porterhouse chop.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000295,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,porterhouse chop (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw porterhouse chop.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000097,desert area,,"A region rendered barren or partially barren by environmental extremes, especially by low rainfall.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Desert|TGN:21201|SWEETRealm:Desert|LTER:147|Geonames:T.DSRT|FTT:188|FTT:1|EcoLexicon:desert,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00000097,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,envoPolar,,,,,,,,desert area,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A region rendered barren or partially barren by environmental extremes, especially by low rainfall.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510161,label claim in food name,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0161,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510161,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,label claim in food name,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/PATO_0000384,male,,A biological sex quality inhering in an individual or a population whose sex organs contain only male gametes.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI BioSample: male,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PATO:0000384,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/pato.owl,http://purl.oboInOwllibrary.org/oboInOwl/pato#value_slim|http://purl.oboInOwllibrary.org/oboInOwl/pato#mpath_slim,,,,,,,,male,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A biological sex quality inhering in an individual or a population whose sex organs contain only male gametes.,,,,,,,,
http://purl.obolibrary.org/obo/PATO_0000383,female,,A biological sex quality inhering in an individual or a population that only produces gametes that can be fertilised by male gametes.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,NCBI BioSample: female,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PATO:0000383,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/pato.owl,http://purl.oboInOwllibrary.org/oboInOwl/pato#value_slim|http://purl.oboInOwllibrary.org/oboInOwl/pato#mpath_slim,,,,,,,,female,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A biological sex quality inhering in an individual or a population that only produces gametes that can be fertilised by male gametes.,,,,,,,,
http://purl.obolibrary.org/obo/STATO_0000620,risk,,A proportion in which the numerator represents the cases in which an event or characteristic occurs and the denominator represents all possible cases.,FALSE,,,,,,,,,,,,,,,,,,,,,COKA/SEVCO,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,STATO:0000620,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/stato.owl,,,,,,,,,risk,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Brian S. Alper, Harold Lehmann, Joanne Dehnbostel, Muhammad Afzal, Janice Tufte",,,,A proportion in which the numerator represents the cases in which an event or characteristic occurs and the denominator represents all possible cases.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0035520,anterior mediastinal lymph node,anterior mediastinal node,"A lymph node located in the superior mediastinum that collects lymph from the thymus, the pericardium, and the right side of the heart.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C0229758|SCTID:245335005|NCIT:C32097|FMA:12775,,,,,,,,,,,,,,,,,,,,,,,,,anterior mediastinal node,,,,UBERON:0035520,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,anterior mediastinal lymph node,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A lymph node located in the superior mediastinum that collects lymph from the thymus, the pericardium, and the right side of the heart.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00002699,barramundi fillet,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00002699,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,barramundi fillet,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_11265,trachoma,,"A commensal bacterial infectious disease that results_in infection located_in eye, has_material_basis_in Chlamydia trachomatis (A, B, Ba and C serovars), which is transmitted_by contact with eye discharge from the infected person and transmitted_by congenital method. The infection causes eyelid to turn inward which makes eyelashes to scratch the cornea.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:11265,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,trachoma,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A commensal bacterial infectious disease that results_in infection located_in eye, has_material_basis_in Chlamydia trachomatis (A, B, Ba and C serovars), which is transmitted_by contact with eye discharge from the infected person and transmitted_by congenital method. The infection causes eyelid to turn inward which makes eyelashes to scratch the cornea.",,,,,,,,
http://purl.obolibrary.org/obo/DOID_11263,chlamydia,,A commensal bacterial infectious disease that is caused by Chlamydia trachomatis.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:11263,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,chlamydia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A commensal bacterial infectious disease that is caused by Chlamydia trachomatis.,,,,,,,,
http://purl.obolibrary.org/obo/DOID_11262,ornithosis,,"A primary bacterial infectious disease that results_in systemic infection, has_material_basis_in Chlamydia psittaci, which is transmitted_by inhaling aerosolized dried droppings or transmitted_by contact with infected birds. The infection has_symptom fever, has_symptom headache, has_symptom rash, has_symptom chills, and has_symptom pneumonia.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:11262,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,ornithosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A primary bacterial infectious disease that results_in systemic infection, has_material_basis_in Chlamydia psittaci, which is transmitted_by inhaling aerosolized dried droppings or transmitted_by contact with infected birds. The infection has_symptom fever, has_symptom headache, has_symptom rash, has_symptom chills, and has_symptom pneumonia.",,,,,,,,
http://purl.obolibrary.org/obo/ARO_3004398,automated testing platform,,Automated system of analysis for determining antimicrobial susceptibility.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ARO:3004398,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/aro.owl,,,,,,,,,automated testing platform,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Automated system of analysis for determining antimicrobial susceptibility.,,,,,,,,
http://purl.obolibrary.org/obo/PCO_0000000,collection of organisms,,"A material entity that consists of two or more organisms, viruses, or viroids.",FALSE,,,,,,,organism collection|group of organism,,,,,,,May be of the same or different species.,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000125,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PCO:0000000,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/pco.owl|http://purl.obolibrary.org/obo/cob.owl,,,,,,,,,collection of organisms,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A material entity that consists of two or more organisms, viruses, or viroids.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0101081,lineage/clade analysis report filename,lineage/clade analysis report filename,A data field which describes the filename of the report containing the results of a lineage or clade analysis.,FALSE,,,,,,,PCDS:lineage_clade_analysis_report_filename,,,,,,,PCDS: Provide the filename of the report containing the results of the lineage/clade analysis.,,,,,,,,,,,,,,PCDS: MeaSeq_Report.html,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,lineage/clade analysis report filename,lineage/clade analysis report filename slot,,,,GENEPIO:0101081,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,lineage/clade analysis report filename,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the filename of the report containing the results of a lineage or clade analysis.,,PCDS: The filename of the report containing the results of a lineage/clade analysis.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001716,subgroup,,Taxonomy below subspecies; sometimes used in viruses to denote subgroups taken from a single isolate.,FALSE,,,,,,,,,,,,,,,,,,,,,NCBI Biosample,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001716,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,subgroup,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,Taxonomy below subspecies; sometimes used in viruses to denote subgroups taken from a single isolate.,,,,,,,,
http://purl.obolibrary.org/obo/SO_0001027,genotype,,"A genotype is a variant genome, complete or incomplete.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://en.wikipedia.org/wiki/Genotype,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SO:0001027,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/so.owl,,,,,,,,,genotype,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A genotype is a variant genome, complete or incomplete.",,,,,,,,
http://purl.obolibrary.org/obo/SO_0001026,genome,,A genome is the sum of genetic material within a cell or virion.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000122,http://en.wikipedia.org/wiki/Genome,,,,,,,,,,,,,,,,,,,,,,,,,,,,,SO:0001026,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/so.owl,,,,,,,,,genome,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,A genome is the sum of genetic material within a cell or virion.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_49319,carbocyclic antibiotic,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:49319,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,carbocyclic antibiotic,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00000106,grassland area,,An area in which grasses (Graminae) are a significant component of the vegetation.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:00000106,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,grassland area,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An area in which grasses (Graminae) are a significant component of the vegetation.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0000030,obsolete: specimen source environmental material,,"The environmental material level refers to the material that was displaced by the sample, or material in which a sample was embedded, prior to the sampling event. Environmental material terms are generally mass nouns. Examples include: air, soil, or water. EnvO (v 2013-06-14) terms can be found via the link: www.environmentontology.org/Browse-EnvO",TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0000030,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: specimen source environmental material,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ENVO_00010483,,,"The environmental material level refers to the material that was displaced by the sample, or material in which a sample was embedded, prior to the sampling event. Environmental material terms are generally mass nouns. Examples include: air, soil, or water. EnvO (v 2013-06-14) terms can be found via the link: www.environmentontology.org/Browse-EnvO",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100324,NCBI SRA library strategy,library strategy,A library strategy,FALSE,,,,,,,PCDS:ncbi_sra_library_strategy,,,,,,,PCDS: Provide the library strategy by selecting a value from the pick list. For amplicon sequencing select 'AMPLICON'.,,,,,,,,,,,"These metadata fields are defined specifically for use with the NCBI SRA submission template. They are organizational constructs intended to support a particular template and underlying database and should not be reused to model metadata outside the intended context. Where possible, more general, template‑independent terms should be used instead.",,,PCDS: MNase-Seq,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,library strategy,NCBI SRA library_strategy,,,,GENEPIO:0100324,,,,,,,,,,,,,,2026-01-29T00:00:09.532Z,,,,,,,,,,,,,http://purl.obolibrary.org/obo/GENEPIO_0001973,,,,,,NCBI SRA library strategy,,,,,,,,,,,,,,,,,,,,,,https://www.ncbi.nlm.nih.gov/core/assets/sra/files/SRA_metadata_acc_example.xlsx,,,,,,,,,,A library strategy,,PCDS: See NCBI SRA template for details.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002144,unsigned integer value specification,,A 32 bit number having a range 0 - 4294967295.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0002144,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,unsigned integer value specification,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A 32 bit number having a range 0 - 4294967295.,,,,unsigned integer,,,,
http://purl.obolibrary.org/obo/CHEBI_355510,cefotiam,,"A cephalosporin with ({1-[2-(dimethylamino)ethyl]-1<em>H</em>-tetrazol-5-yl}sulfanyl)methyl and (2-amino-1,3-thiazol-4-yl)acetamido substituents at positions 3 and 7, respectively, of the cephem skeleton. A third generation beta-lactam cephalosporin antibiotic, it is active against a broad spectrum of both Gram positive and Gram negative bacteria.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:355510,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,cefotiam,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A cephalosporin with ({1-[2-(dimethylamino)ethyl]-1<em>H</em>-tetrazol-5-yl}sulfanyl)methyl and (2-amino-1,3-thiazol-4-yl)acetamido substituents at positions 3 and 7, respectively, of the cephem skeleton. A third generation beta-lactam cephalosporin antibiotic, it is active against a broad spectrum of both Gram positive and Gram negative bacteria.",,,,,,,,
http://purl.obolibrary.org/obo/UO_1000151,century based unit,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:1000151,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,century based unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UO_1000152,half life based unit,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:1000152,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,half life based unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000155,beef top sirloin fillet,,A cut that is portioned from a top sirloin steak.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000155,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef top sirloin fillet,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A cut that is portioned from a top sirloin steak.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000256,lamb shank half,,"A leg half that is derived from a whole leg. The anatomical location is the “half” that comes from the shank or lower section of the Leg. The half includes the center section with muscles from the bottom, eye, tip, and top.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000256,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,lamb shank half,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A leg half that is derived from a whole leg. The anatomical location is the “half” that comes from the shank or lower section of the Leg. The half includes the center section with muscles from the bottom, eye, tip, and top.",,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0393,Swedish,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0393,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Swedish,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0392,Spanish,Spaniard|Castilian|Castellano,Individuals who self-identify or are reported by authors as living in or originating from Spain.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Spaniard|Castilian|Castellano,,,,HANCESTRO:0392,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Spanish,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Individuals who self-identify or are reported by authors as living in or originating from Spain.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0391,Slovene,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0391,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Slovene,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0390,Slovak,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0390,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Slovak,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0397,Argentine,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0397,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Argentine,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0396,Ukrainian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0396,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Ukrainian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0398,Bahamian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0398,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Bahamian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0395,Macedonian,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0395,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Macedonian,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0399,Belizean,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0399,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Belizean,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0394,Swiss,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,HANCESTRO:0394,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Swiss,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/OBA_2001027,age of onset of migraine with aura,age migraine with aura symptoms begin|age at onset of migraine with aura,The age at which migraine with aura manifestations first appear.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,age migraine with aura symptoms begin|age at onset of migraine with aura,,,,OBA:2001027,,,,,,,,,,,,,,,,,,,,,,,,http://www.ebi.ac.uk/efo/efo.owl,,,,,,,,,age of onset of migraine with aura,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,The age at which migraine with aura manifestations first appear.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_478164,cefepime,,"A cephalosporin bearing (1-methylpyrrolidinium-1-yl)methyl and (2<i>Z</i>)-2-(2-amino-1,3-thiazol-4-yl)-2-(methoxyimino)acetamido groups at positions 3 and 7, respectively, of the cephem skeleton.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:473919|CHEBI:3486,,,,,,CHEBI:478164,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,cefepime,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A cephalosporin bearing (1-methylpyrrolidinium-1-yl)methyl and (2<i>Z</i>)-2-(2-amino-1,3-thiazol-4-yl)-2-(methoxyimino)acetamido groups at positions 3 and 7, respectively, of the cephem skeleton.",,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_29668,Pulvomycin,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:29668,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,Pulvomycin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100932,specimen collection by scooping,,A specimen collection process that is used to dig out an amount of sample using a scoop.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100932,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-5275-8866,2023-11-29T11:21:54Z,,,,,,,,,,,,,,,,,,,specimen collection by scooping,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A specimen collection process that is used to dig out an amount of sample using a scoop.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03490215,jar,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=M0215,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03490215,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,jar,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/PATO_0002390,radius,,A length quality which is equal to the length of any straight line segment that passes from the center of a circle to any endpoint on the circular boundary. The radius is half of the diameter.,FALSE,,,,,,,,,,,,,,"Damion Dooley's note: We can't say radius is a subclass of ""linear coordinate"" because length is considered a quality/specifically dependent continuant, which is disjoint with immaterial entity/independent continuant .  I.e. ""length"" as quality unfortunately can't pertain to abstract entities, only ""real"" ones.",,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PATO:0002390,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/pato.owl,http://purl.oboInOwllibrary.org/oboInOwl/pato#scalar_slim|http://purl.oboInOwllibrary.org/oboInOwl/pato#attribute_slim,,,,,,,,radius,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A length quality which is equal to the length of any straight line segment that passes from the center of a circle to any endpoint on the circular boundary. The radius is half of the diameter.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03480018,packed in salt brine,,Salt brine which is used as a packing medium for food material.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=K0018,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03480018,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,packed in salt brine,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Salt brine which is used as a packing medium for food material.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0002063,obsolete: British Society for Antimicrobial Chemotherapy (BSAC),,"BSAC is a British inter-professional organisation involved in antibiotic education, research and leadership",TRUE,,,,,,,,,,,,,,,,,,,,,,,true,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,BSAC,,,,,,GENEPIO:0002063,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,obsolete: British Society for Antimicrobial Chemotherapy (BSAC),,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,http://purl.obolibrary.org/obo/ARO_3004365,,,"BSAC is a British inter-professional organisation involved in antibiotic education, research and leadership",,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C165587,Pooled Sample,Pooled Specimen|Pooled Sample|Pooled|Composite Sample,A sample containing a mixture of multiple individual specimens of interest that were collected in a study.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Pooled Specimen|Pooled Sample|Pooled|Composite Sample,,,,NCIT:C165587,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Pooled Sample,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A sample containing a mixture of multiple individual specimens of interest that were collected in a study.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0000344,mucosa,organ mucosa|mucous membrane|mucosal region|mucosa of organ part|mucosa of organ,"A lining of mostly endodermal origin, covered in epithelium, which is involved in absorption and secretion. They line various body cavities that are exposed to the external environment and internal organs. It is at several places continuous with skin: at the nostrils, the lips, the ears, the genital area, and the anus. The sticky, thick fluid secreted by the mucous membranes and gland is termed mucus. The term mucous membrane refers to where they are found in the body and not every mucous membrane secretes mucus[WP].",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,galen:Mucosa|Wikipedia:Mucous_membrane|UMLS:C0026724|SCTID:361693009|NCIT:C13166|MESH:D009092|GAID:297|FMA:85358|FMA:85355|EV:0100382|EHDAA2_RETIRED:0003234|CALOHA:TS-2031|BTO:0000886|AEO:0000199,,,,,,,,,,,,,,,,,,,,,,,,,organ mucosa|mucous membrane|mucosal region|mucosa of organ part|mucosa of organ,,,,UBERON:0000344,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,mucosa,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A lining of mostly endodermal origin, covered in epithelium, which is involved in absorption and secretion. They line various body cavities that are exposed to the external environment and internal organs. It is at several places continuous with skin: at the nostrils, the lips, the ears, the genital area, and the anus. The sticky, thick fluid secreted by the mucous membranes and gland is termed mucus. The term mucous membrane refers to where they are found in the body and not every mucous membrane secretes mucus[WP].",,,,,,,,
http://purl.obolibrary.org/obo/UO_1000076,mole fraction based unit,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:1000076,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,mole fraction based unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_12716,newborn respiratory distress syndrome,,"A respiratory failure that is characterized by deficiency of the surfactant coating the inner surface of the lungs, by failure of the lungs to expand and contract properly during breathing with resulting collapse, and by the accumulation of a protein-containing film lining the alveoli and their ducts.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:12716,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,newborn respiratory distress syndrome,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A respiratory failure that is characterized by deficiency of the surfactant coating the inner surface of the lungs, by failure of the lungs to expand and contract properly during breathing with resulting collapse, and by the accumulation of a protein-containing film lining the alveoli and their ducts.",,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000509,Marakwet,,A Kalenjin population with a population size of 180000,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000509,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Marakwet|Marakwet,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Kalenjin population with a population size of 180000,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000504,Antanosy,,A Malagasy population with a population size of 772000,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000504,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Antanosy|Antanosy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Malagasy population with a population size of 772000,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000501,Borana,,A Oromo population with a population size of 1025000,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000501,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Borana|Borana,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Oromo population with a population size of 1025000,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000503,Antambahoaka,,A Malagasy population with a population size of 50000,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000503,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Antambahoaka|Antambahoaka,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Malagasy population with a population size of 50000,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000502,Gabra,,A Oromo population with a population size of 700000,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000502,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Gabra|Gabra,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Oromo population with a population size of 700000,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000508,Tanala,,A Malagasy population with a population size of 400000,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000508,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Tanala|Tanala,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Malagasy population with a population size of 400000,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000505,Bezanozano,,A Malagasy population with a population size of 100000,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000505,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Bezanozano|Bezanozano,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Malagasy population with a population size of 100000,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000506,Mikea,,A Malagasy population with a population size of 1500,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000506,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Mikea|Mikea,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Malagasy population with a population size of 1500,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000500,Hadiya,,A Cushitic Eastern population with a population size of 2 million,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000500,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Hadiya|Hadiya,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Cushitic Eastern population with a population size of 2 million,,,,,,,,
http://purl.obolibrary.org/obo/AfPO_0000507,Sihanaka,,A Malagasy population with a population size of 200000,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,AfPO:0000507,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Sihanaka|Sihanaka,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A Malagasy population with a population size of 200000,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100565,minor quality control issues identified datum,,"A data item which is a statement confirming that quality control processes were carried out and that the sequence did not meet the assessment criteria, however the issues detected were minor.",FALSE,,,,,,,minor quality control issues identified,,,,,,,"Example: This statement may be used in conjunction with the quality control determination statement ""sequence failed quality control"" to communicate that the reasons why the sequence did not meet the assessment criteria. Minor issues may include phenomena that the analyst should review e.g. amplicons detected in the negative control sequence or more mutations than expected based on the reference sequence. The details of the issues can be described in the ""quality control details"" field. Note: quality control here refers to quality of the raw reads, consensus sequence or assembly, not the qaulity of analytical results e.g. lineage assignment.",,,,,,,,,,,,,,,,,ready for release,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100565,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-1107-9135,2023-01-23T00:42:19.315Z,,,,,,,,,,,,,,,,,,,minor quality control issues identified datum,,,,,,,,,,,,,,,,,,,,,,The PHA4GE QC Contextual Data Tags Specification: https://github.com/pha4ge/contextual-data-qc-tags,,,,,,,,,,"A data item which is a statement confirming that quality control processes were carried out and that the sequence did not meet the assessment criteria, however the issues detected were minor.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001403,host vaccination information field category,PCDS:host vaccination information,A data field category which refers to host vaccination information fields.,FALSE,,,,,,,PCDS:host_vaccination_information_slot_group,,,,,,,,,,,,,,,,,,,,,,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,PCDS:host vaccination information,host vaccination information slot category,,,,GENEPIO:0001403,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,host vaccination information field category,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field category which refers to host vaccination information fields.,,,,,,,,
http://purl.obolibrary.org/obo/EPO_0000016,common vehicle transmission,,"Transmission of a disease agent (infectious pathogen, toxic chemical, etc.) from a source that is common to those who acquire the disease. Common vehicles include air, water, food, injected substances. Legionellosis is an example of common vehicle spread in air that has passed through air conditioning equipment contaminated by the causal organism. HIV disease and hepatitis B and C can be spread among illicit drug users by the common vehicle of contaminated needles and syringes. Cholera and many other waterborne diseases are spread by the common vehicle of contaminated water.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,EPO:0000016,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,common vehicle transmission,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Transmission of a disease agent (infectious pathogen, toxic chemical, etc.) from a source that is common to those who acquire the disease. Common vehicles include air, water, food, injected substances. Legionellosis is an example of common vehicle spread in air that has passed through air conditioning equipment contaminated by the causal organism. HIV disease and hepatitis B and C can be spread among illicit drug users by the common vehicle of contaminated needles and syringes. Cholera and many other waterborne diseases are spread by the common vehicle of contaminated water.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03460326,bacterial food-curing process,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=H0326,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03460326,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,bacterial food-curing process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510102,no flavor added claim,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0102,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510102,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,no flavor added claim,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0036072,respiratory primordium epithelium,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,EHDAA2:0004070,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0036072,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,respiratory primordium epithelium,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_01000313,anthropogenic environment,,An anthropogenic environment is an environmental system which is the product of human activity.,FALSE,,,,,,,,,,,,,,Unsatisfactory definition here. Must consider the threshold that makes an environmental system anthropogenic.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ENVO:01000313,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,anthropogenic environment,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An anthropogenic environment is an environmental system which is the product of human activity.,,,,,,,,
http://purl.obolibrary.org/obo/GAZ_00004517,"populated place, Canary Islands",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:00004517,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Canary Islands",http://purl.obolibrary.org/obo/GAZ_00001139,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/DOID_9861,miliary tuberculosis,,An extrapulmonary tuberculosis that results in formation of tiny lesions in all the organs.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,DOID:9861,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/doid.owl,,,,,,,,,miliary tuberculosis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An extrapulmonary tuberculosis that results in formation of tiny lesions in all the organs.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0733,Cambodian in Cambodia (SGDP),Cambodian,A population made up of 2 samples from Cambodian individuals recruited in Cambodia as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Cambodian,,,,HANCESTRO:0733,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Cambodian in Cambodia (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Cambodian individuals recruited in Cambodia as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0736,Han in China (SGDP),Han,A population made up of 3 samples from Han individuals recruited in China as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Han,,,,HANCESTRO:0736,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Han in China (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 3 samples from Han individuals recruited in China as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0730,Ami in Taiwan (SGDP),Ami,A population made up of 2 samples from Ami individuals recruited in Taiwan as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Ami,,,,HANCESTRO:0730,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Ami in Taiwan (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Ami individuals recruited in Taiwan as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0732,Burmese in Myanmar (SGDP),Burmese,A population made up of 2 samples from Burmese individuals recruited in Myanmar as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Burmese,,,,HANCESTRO:0732,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Burmese in Myanmar (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Burmese individuals recruited in Myanmar as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0737,Hezhen in China (SGDP),Hezhen,A population made up of 2 samples from Hezhen individuals recruited in China as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Hezhen,,,,HANCESTRO:0737,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Hezhen in China (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Hezhen individuals recruited in China as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0731,Atayal in Taiwan (SGDP),Atayal,A population made up of 1 samples from Atayal individuals recruited in Taiwan as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Atayal,,,,HANCESTRO:0731,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Atayal in Taiwan (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 1 samples from Atayal individuals recruited in Taiwan as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0734,Dai in China (SGDP),Dai,A population made up of 4 samples from Dai individuals recruited in China as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Dai,,,,HANCESTRO:0734,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Dai in China (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 4 samples from Dai individuals recruited in China as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0735,Daur in China (SGDP),Daur,A population made up of 1 samples from Daur individuals recruited in China as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Daur,,,,HANCESTRO:0735,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Daur in China (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 1 samples from Daur individuals recruited in China as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0739,Kinh in Vietnam (SGDP),Kinh,A population made up of 2 samples from Kinh individuals recruited in Vietnam as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Kinh,,,,HANCESTRO:0739,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Kinh in Vietnam (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 2 samples from Kinh individuals recruited in Vietnam as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,,,,,,,,
http://purl.obolibrary.org/obo/HANCESTRO_0738,Japanese in Japan (SGDP),Japanese,A population made up of 3 samples from Japanese individuals recruited in Japan as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Japanese,,,,HANCESTRO:0738,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hancestro.owl,,,,,,,,,Japanese in Japan (SGDP),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A population made up of 3 samples from Japanese individuals recruited in Japan as part of the Simons Genome Diversity Project. The population was assigned by the collecting project to the superpopulation East Asian.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100238,convention exposure datum,,A human mass gathering in which humans meet at an arranged place and time in order to discuss or engage in some common interest.,FALSE,,,,,,,Convention,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Convention_(meeting),,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100238,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,convention exposure datum,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A human mass gathering in which humans meet at an arranged place and time in order to discuss or engage in some common interest.,,,,,,,,
http://purl.obolibrary.org/obo/UBERON_0010314,structure with developmental contribution from neural crest,,An anatomical structure that has some part that develops from the neural crest.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UBERON:0010314,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uberon.owl,,,,,,,,,structure with developmental contribution from neural crest,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An anatomical structure that has some part that develops from the neural crest.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03530052,ripe,,A fruit ripeness characteristic in which a fruit has achieved full maturity and is ready for utilization.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=Z0052,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03530052,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,ripe,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A fruit ripeness characteristic in which a fruit has achieved full maturity and is ready for utilization.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000005,beef bottom round steak (raw),,A raw beef bottom round steak.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000005,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef bottom round steak (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A raw beef bottom round steak.,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_404903,ertapenem,,"Meropenem in which the one of the two methyl groups attached to the amide nitrogen is replaced by hydrogen while the other is replaced by a 3-carboxyphenyl group. The sodium salt is used for the treatment of moderate to severe susceptible infections including intra-abdominal  and acute gynaecological infections, pneumonia, and infections of the skin and of the urinary tract.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:471574,,,,,,CHEBI:404903,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,ertapenem,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Meropenem in which the one of the two methyl groups attached to the amide nitrogen is replaced by hydrogen while the other is replaced by a 3-carboxyphenyl group. The sodium salt is used for the treatment of moderate to severe susceptible infections including intra-abdominal  and acute gynaecological infections, pneumonia, and infections of the skin and of the urinary tract.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001460,consensus sequence name,consensus sequence name,A data field which describes the name of the consensus sequence.,FALSE,,,,,,,PCDS:consensus_sequence_filename,,,,,,,PCDS: Provide the name and version number of the consensus sequence FASTA file.,,,,,,,,,,,,,,PCDS: mvs123assembly.fasta,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,consensus sequence name,consensus sequence name slot,,,,GENEPIO:0001460,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2021-04-24T00:42:14Z,,,,,,,,,,,,,,,,,,,consensus sequence name,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A data field which describes the name of the consensus sequence.,,PCDS: The name of the consensus sequence file.,,,,,,
http://purl.obolibrary.org/obo/ENVO_03501300,manure,liquid manure|green manure|farm slurry|compost|animal manure,An environmental material consisting of organic matter from plants and/or animals that is used in agriculture as fertilizer.,FALSE,,,,,,,,,,,,,,Most manure consists of animal feces; other sources include compost and green manure.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,liquid manure|green manure|farm slurry|compost|animal manure,,,ENVO:03501300,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,manure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental material consisting of organic matter from plants and/or animals that is used in agriculture as fertilizer.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001833,GNISID,,,FALSE,,,,,,,,,,,,,,,,,,,,,https://nhd.usgs.gov/gnis.html,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000428,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001833,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GNISID,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The Geographic Names Information System (GNIS), developed by the U.S. Geological Survey in cooperation with the U.S. Board on Geographic Names, contains information about physical and cultural geographic features in the United States and associated areas, both current and historical.|Damion Dooley",,,,,,,,,,,,
http://purl.obolibrary.org/obo/NCIT_C205472,Sex Assigned at Birth,Sex Assigned at Birth|SEXABRTH|Birth Sex,"The male or female designation that doctors ascribe to a newborn infant, usually based on the appearance of the child's external genitalia, and that is marked on their birth records.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Sex Assigned at Birth|SEXABRTH|Birth Sex,,,,NCIT:C205472,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/ncit.owl,,,,,,,,,Sex Assigned at Birth,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"The male or female designation that doctors ascribe to a newborn infant, usually based on the appearance of the child's external genitalia, and that is marked on their birth records.",,,,,,,,
http://purl.obolibrary.org/obo/HP_0002060,Abnormal cerebral morphology,Cerebral lesion|Abnormality of the telencephalon|Abnormality of the cerebrum,"Any structural abnormality of the telencephalon, which is also known as the cerebrum.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C4021762,,,,,,,,,,,,,,,,,,,,,,,,,Cerebral lesion|Abnormality of the telencephalon|Abnormality of the cerebrum,,,,HP:0002060,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/hp.owl,,,,,,,,,Abnormal cerebral morphology,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Any structural abnormality of the telencephalon, which is also known as the cerebrum.",,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001765,1 - standard draft,,Standard draft: describing the minimum information needed for submission to a public database.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001765,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,1 - standard draft,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,,,Standard draft: describing the minimum information needed for submission to a public database.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000097,cubic centimeter,cubic centimetre|cm^3|cc,"A volume unit which is equal to one millionth of a cubic meter or 10^[-9] m^[3], or to 1 ml.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,cubic centimetre|cm^3|cc,,,,UO:0000097,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,cubic centimeter,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A volume unit which is equal to one millionth of a cubic meter or 10^[-9] m^[3], or to 1 ml.",,,,,,,,
http://purl.obolibrary.org/obo/UO_0000096,cubic meter,m^[3]|cubic metre,A volume unit which is equal to the volume of a cube with edges one meter in length. One cubic meter equals to 1000 liters.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,m^[3]|cubic metre,,,,UO:0000096,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,cubic meter,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A volume unit which is equal to the volume of a cube with edges one meter in length. One cubic meter equals to 1000 liters.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000094,meter per second,metre per second|m/s,A speed/velocity unit which is equal to the speed of an object traveling 1 meter distance in one second.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,metre per second|m/s,,,,UO:0000094,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,meter per second,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A speed/velocity unit which is equal to the speed of an object traveling 1 meter distance in one second.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000093,cubic meter per kilogram,m^[3]/kg|cubic metre per kilogram,A specific volume unit which is equal to one cubic meter volume occupied by one kilogram of a particular substance.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,m^[3]/kg|cubic metre per kilogram,,,,UO:0000093,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,cubic meter per kilogram,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A specific volume unit which is equal to one cubic meter volume occupied by one kilogram of a particular substance.,,,,,,,,
http://purl.obolibrary.org/obo/UO_0000090,cubic centimeter per mole,cubic centimetre per mole|cm^[3]/mol,"A molar volume unit which is equal to 1 cubic centimeter occupied by one mole of a substance in the form of a solid, liquid, or gas.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,cubic centimetre per mole|cm^[3]/mol,,,,UO:0000090,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,cubic centimeter per mole,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A molar volume unit which is equal to 1 cubic centimeter occupied by one mole of a substance in the form of a solid, liquid, or gas.",,,,,,,,
http://purl.obolibrary.org/obo/UO_0000095,volume unit,,"A unit which is a standard measure of the amount of space occupied by any substance, whether solid, liquid, or gas.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UO:0000095,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,volume unit,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A unit which is a standard measure of the amount of space occupied by any substance, whether solid, liquid, or gas.",,,,,,,,
http://purl.obolibrary.org/obo/UO_0000099,liter,litre|l|L,"A volume unit which is equal to one thousandth of a cubic meter or 10^[-3] m^[3], or to 1 decimeter.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,litre|l|L,,,,UO:0000099,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,liter,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A volume unit which is equal to one thousandth of a cubic meter or 10^[-3] m^[3], or to 1 decimeter.",,,,,,,,
http://purl.obolibrary.org/obo/UO_0000098,milliliter,ml|millilitre,"A volume unit which is equal to one thousandth of a liter or 10^[-3] L, or to 1 cubic centimeter.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ml|millilitre,,,,UO:0000098,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/uo.owl,,,,,,,,,milliliter,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A volume unit which is equal to one thousandth of a liter or 10^[-3] L, or to 1 cubic centimeter.",,,,,,,,
http://purl.obolibrary.org/obo/MONDO_0035375,multisystem inflammatory syndrome in children and adults,MIS-C/A,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,UMLS:C5680268|Orphanet:598363|MEDGEN:1842571|GARD:0022403,,,,,,,,,,,,,,,,,,,,,,,,,MIS-C/A,,,,MONDO:0035375,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/mondo.owl,http://purl.oboInOwllibrary.org/oboInOwl/mondo#rare|http://purl.oboInOwllibrary.org/oboInOwl/mondo#orphanet_rare|http://purl.oboInOwllibrary.org/oboInOwl/mondo#ordo_disorder|http://purl.oboInOwllibrary.org/oboInOwl/mondo#nord_rare|http://purl.oboInOwllibrary.org/oboInOwl/mondo#gard_rare,,,,,,,,multisystem inflammatory syndrome in children and adults,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100968,454 Genome Sequencer FLX+,,A 454 Genome Sequencer that performs pyrosequencing and comprises both optics and fluidics subsystems and can be used for longer reads when used with the long-read Sequencing Kit XL+.,FALSE,,,,,,,454 GS FLX+,,,,,,,"The fluidics subsystem ensures accurate reagent dispensing. It consists of a reagents cassette (which holds the reagent containers), a sipper manifold, pumps, valves, and debubblers. The fluidics subsystem flows the sequencing reagents across the wells of the PicoTiterPlate device, and moves the spent reagents from the PicoTiterPlate device to the waste receptacle. The optics subsystem consists of a CCD camera and a camera controller. The camera captures the light emitted in the wells of the PicoTiterPlate device during each step of the sequencing cycle, and sends the digital images to the computer subsystem for processing. The computer controls the other Sequencer subsystems, and processes the digital images sent by the camera to extract the DNA sequence information.",,,,,,,https://www.thelabworldgroup.com/product/roche-gs-454-flx-dna-sequencer/ |https://en.wikipedia.org/wiki/454_Life_Sciences,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,to be replace with external ontology term,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100968,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2023-11-28T18:23:15.862Z,,,,,,,,,,,,,,,,,,,454 Genome Sequencer FLX+,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A 454 Genome Sequencer that performs pyrosequencing and comprises both optics and fluidics subsystems and can be used for longer reads when used with the long-read Sequencing Kit XL+.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02010189,"piece of animal breast (skinless, boneless)",,A piece of skinless and boneless animal breast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02010189,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"piece of animal breast (skinless, boneless)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A piece of skinless and boneless animal breast.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02021134,piece of lamb,,A severed part of a lamb.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02021134,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,piece of lamb,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A severed part of a lamb.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100214,occupational exposure process,,A process occuring within or in the vicinity of a human occupational environment that exposes the recipient organism to a material entity.,FALSE,,,,,,,Occupational Exposure,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100214,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,occupational exposure process,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A process occuring within or in the vicinity of a human occupational environment that exposes the recipient organism to a material entity.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00003392,aquaculture open-pen rearing,,"Aquatic farmed food production located offshore, in coastal areas or in freshwater lakes, open-net pens, or “cages”, that allow for free exchange between the farm and the surrounding environment.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00003392,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,aquaculture open-pen rearing,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Aquatic farmed food production located offshore, in coastal areas or in freshwater lakes, open-net pens, or “cages”, that allow for free exchange between the farm and the surrounding environment.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_00003357,pet treat,,"A food item intended to provide pleasure or reward to an animal, and which might not be nutritious.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:00003357,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,pet treat,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"A food item intended to provide pleasure or reward to an animal, and which might not be nutritious.",,,,,,,,
http://purl.obolibrary.org/obo/FOODON_02000226,beef rib steak,,A beef steak that is a cut from the rib roast.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:02000226,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,beef rib steak,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A beef steak that is a cut from the rib roast.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001840,good health status,,Good - Vital signs are stable and within normal limits. Patient is conscious and comfortable. Indicators are excellent.,FALSE,,,,,http://purl.obolibrary.org/obo/GENEPIO_0001848,,,,http://purl.obolibrary.org/obo/NCIT_C115935,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000120,AHA Hippa: Good|http://purl.obolibrary.org/obo/GENEPIO_0001845|http://purl.obolibrary.org/obo/GENEPIO_0001837,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001840,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,good health status,,,,,,,,,,,,,,,,,,,,,,,,,,,,Damion Dooley,,AHA HIPPA: http://www.aha.org/content/00-10/overview0302.pdf,,Good - Vital signs are stable and within normal limits. Patient is conscious and comfortable. Indicators are excellent.,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100018,surveillance from international worker testing strategy,,A travel-associated surveillance strategy in which individuals are selected if they have a travel history outside of the reporting country in a specified number of days before onset of symptoms.,FALSE,,,,,,,Surveillance from international worker testing,,,,,,,,,,,,,,,,,,"Planned Obsolescence: this term is a placeholder for a term requested in another ontology. Once the appropriate ontology term is available, this term’s identifier will be obsoleted with a “term replaced by” id of the other term.",,,,,,requires discussion,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0100018,,,,,,,,,,,,,https://orcid.org/0000-0002-9578-0788|https://orcid.org/0000-0002-8844-9165|https://orcid.org/0000-0002-1107-9135,2022-01-19T18:23:15.862Z,,,,,,,,,,,,,,,,,,,surveillance from international worker testing strategy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,A travel-associated surveillance strategy in which individuals are selected if they have a travel history outside of the reporting country in a specified number of days before onset of symptoms.,,,,,,,,
http://purl.obolibrary.org/obo/ENVO_00002186,contaminated water,polluted water,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://en.wikipedia.org/wiki/Contaminated_water|EcoLexicon:water_pollution,,,,,,,,,,,,,,,,,,,,,,,,,polluted water,,,,ENVO:00002186,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/envo.owl,,,,,,,,,contaminated water,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/CHEBI_18111,ribosomal RNA,,"RNA molecules which are essential structural and functional components of ribosomes, the subcellular units responsible for protein synthesis.",FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,CHEBI:15010|CHEBI:10636,,,,,,CHEBI:18111,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/chebi.owl,,,,,,,,,ribosomal RNA,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"RNA molecules which are essential structural and functional components of ribosomes, the subcellular units responsible for protein synthesis.",,,,,,,,
http://purl.obolibrary.org/obo/GAZ_07000033,"populated place, Moldova",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GAZ:07000033,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"populated place, Moldova",http://purl.obolibrary.org/obo/GAZ_00003897,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0100840,urinary contamination method,urinary contamination method,An environmental data field which describes the method used to measure urinary contamination.,FALSE,,,,,,,PCDS:urinary_contamination_method,,,,,,,PCDS: Provide the name of the procedure or technology used to measure urinary contamination.,,,,,,,,,,,,,,PCDS: Urobilin Concentration Test,,,metadata incomplete,,,,,,,,,,,,,,,,,,,,,,,,,urinary contamination method,urinary contamination method slot,,,,GENEPIO:0100840,,,,,,,,,,,,,https://orcid.org/0000-0002-1107-9135|https://orcid.org/0000-0001-8008-8249,2024-03-02T00:18:58.865Z,,,,,,,,,,,,,,,,,,,urinary contamination method,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,An environmental data field which describes the method used to measure urinary contamination.,,PCDS: The method used to measure urinary contamination.,,,,,,
http://purl.obolibrary.org/obo/GENEPIO_0001824,TGN,,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/IAO_0000123,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,GENEPIO:0001824,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,TGN,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03311126,food (raw),,Food material which is raw.,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,https://bioregistry.io/reference/siren:F11126,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03311126,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,food (raw),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Food material which is raw.,,,,,,,,
http://purl.obolibrary.org/obo/FOODON_03510189,"infant as food consumer, 0 - 3 months",,,FALSE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://www.langual.org/langual_thesaurus.asp?termid=P0189,,,,,,,,,,,,,,,,,,,,,,,,,,,,,FOODON:03510189,,,,,,,,,,,,,,,,,,,,,,,,http://purl.obolibrary.org/obo/foodon.owl,,,,,,,,,"infant as food consumer, 0 - 3 months",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
