<?xml version="1.0"?>
<diffReport>
<diffSummary>
<numberChangedClasses>
612
</numberChangedClasses>
<numberNewClasses>
40
</numberNewClasses>
<numberDeletedClasses>
0
</numberDeletedClasses>
</diffSummary>
<changedClasses>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0019264</classIRI>
<classLabel>glycine biosynthetic process from L-serine</classLabel>
<deletedAxiom>&apos;glycine biosynthetic process from L-serine&apos; SubClassOf &apos;L-serine metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;glycine biosynthetic process from L-serine&apos; SubClassOf &apos;glycine biosynthetic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0019265</classIRI>
<classLabel>glycine biosynthetic process, by transamination of glyoxylate</classLabel>
<deletedAxiom>&apos;glycine biosynthetic process, by transamination of glyoxylate&apos; SubClassOf &apos;glycine biosynthetic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0019266</classIRI>
<classLabel>L-asparagine biosynthetic process from oxaloacetate</classLabel>
<deletedAxiom>&apos;L-asparagine biosynthetic process from oxaloacetate&apos; SubClassOf &apos;L-asparagine biosynthetic process&apos;</deletedAxiom>
<deletedAxiom>&apos;L-asparagine biosynthetic process from oxaloacetate&apos; SubClassOf &apos;dicarboxylic acid catabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;L-asparagine biosynthetic process from oxaloacetate&apos; SubClassOf &apos;oxaloacetate metabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0019267</classIRI>
<classLabel>L-asparagine biosynthetic process from L-cysteine</classLabel>
<deletedAxiom>&apos;L-asparagine biosynthetic process from L-cysteine&apos; SubClassOf &apos;L-asparagine biosynthetic process&apos;</deletedAxiom>
<deletedAxiom>&apos;L-asparagine biosynthetic process from L-cysteine&apos; SubClassOf &apos;L-cysteine metabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0019279</classIRI>
<classLabel>L-methionine biosynthetic process from L-homoserine via cystathionine</classLabel>
<deletedAxiom>&apos;L-methionine biosynthetic process from L-homoserine via cystathionine&apos; SubClassOf &apos;L-methionine biosynthetic process&apos;</deletedAxiom>
<deletedAxiom>&apos;L-methionine biosynthetic process from L-homoserine via cystathionine&apos; SubClassOf &apos;L-homoserine metabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0019272</classIRI>
<classLabel>L-alanine biosynthetic process from pyruvate</classLabel>
<deletedAxiom>&apos;L-alanine biosynthetic process from pyruvate&apos; SubClassOf &apos;pyruvate metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;L-alanine biosynthetic process from pyruvate&apos; SubClassOf &apos;L-alanine biosynthetic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0019284</classIRI>
<classLabel>L-methionine salvage from S-adenosylmethionine</classLabel>
<deletedAxiom>&apos;L-methionine salvage from S-adenosylmethionine&apos; SubClassOf &apos;L-methionine salvage&apos;</deletedAxiom>
<deletedAxiom>&apos;L-methionine salvage from S-adenosylmethionine&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000050 some &apos;S-adenosylmethionine cycle&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0019280</classIRI>
<classLabel>L-methionine biosynthetic process from L-homoserine via O-acetyl-L-homoserine</classLabel>
<deletedAxiom>&apos;L-methionine biosynthetic process from L-homoserine via O-acetyl-L-homoserine&apos; SubClassOf &apos;L-homoserine metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;L-methionine biosynthetic process from L-homoserine via O-acetyl-L-homoserine&apos; SubClassOf &apos;L-methionine biosynthetic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0019281</classIRI>
<classLabel>L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine</classLabel>
<deletedAxiom>&apos;L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine&apos; SubClassOf &apos;L-methionine biosynthetic process from L-homoserine via cystathionine&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0019283</classIRI>
<classLabel>L-methionine biosynthetic process from L-homoserine via O-phospho-L-homoserine and cystathionine</classLabel>
<deletedAxiom>&apos;L-methionine biosynthetic process from L-homoserine via O-phospho-L-homoserine and cystathionine&apos; SubClassOf &apos;organophosphate metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;L-methionine biosynthetic process from L-homoserine via O-phospho-L-homoserine and cystathionine&apos; SubClassOf &apos;L-homoserine metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;L-methionine biosynthetic process from L-homoserine via O-phospho-L-homoserine and cystathionine&apos; SubClassOf &apos;modified amino acid metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;L-methionine biosynthetic process from L-homoserine via O-phospho-L-homoserine and cystathionine&apos; SubClassOf &apos;phosphate-containing compound metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;L-methionine biosynthetic process from L-homoserine via O-phospho-L-homoserine and cystathionine&apos; SubClassOf &apos;&apos;de novo&apos; L-methionine biosynthetic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0019292</classIRI>
<classLabel>L-tyrosine biosynthetic process from chorismate via 4-hydroxyphenylpyruvate</classLabel>
<deletedAxiom>&apos;L-tyrosine biosynthetic process from chorismate via 4-hydroxyphenylpyruvate&apos; SubClassOf &apos;L-tyrosine biosynthetic process&apos;</deletedAxiom>
<deletedAxiom>&apos;L-tyrosine biosynthetic process from chorismate via 4-hydroxyphenylpyruvate&apos; SubClassOf &apos;chorismate metabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0019293</classIRI>
<classLabel>L-tyrosine biosynthetic process, by oxidation of phenylalanine</classLabel>
<deletedAxiom>&apos;L-tyrosine biosynthetic process, by oxidation of phenylalanine&apos; SubClassOf &apos;L-tyrosine biosynthetic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0140085</classIRI>
<classLabel>L-amino-acid N-acetyltransferase activity</classLabel>
<deletedAxiom>&apos;L-amino-acid N-acetyltransferase activity&apos; SubClassOf &apos;N-acetyltransferase activity&apos;</deletedAxiom>
<newAxiom>&apos;L-amino-acid N-acetyltransferase activity&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140379</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0103033</classIRI>
<classLabel>beta-galactosidase activity (lactose isomerization)</classLabel>
<deletedAxiom>&apos;beta-galactosidase activity (lactose isomerization)&apos; SubClassOf &apos;intramolecular acyltransferase activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0103068</classIRI>
<classLabel>leukotriene C4 gamma-glutamyl transferase activity</classLabel>
<deletedAxiom>&apos;leukotriene C4 gamma-glutamyl transferase activity&apos; SubClassOf &apos;aminoacyltransferase activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0103006</classIRI>
<classLabel>9,10-dihydroxystearate hydroxylase activity</classLabel>
<deletedAxiom>&apos;9,10-dihydroxystearate hydroxylase activity&apos; SubClassOf &apos;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0103004</classIRI>
<classLabel>9,10-epoxystearate hydroxylase activity</classLabel>
<deletedAxiom>&apos;9,10-epoxystearate hydroxylase activity&apos; SubClassOf &apos;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0034823</classIRI>
<classLabel>citronellyl-CoA ligase activity</classLabel>
<deletedAxiom>&apos;citronellyl-CoA ligase activity&apos; SubClassOf &apos;CoA-ligase activity&apos;</deletedAxiom>
<deletedAxiom>&apos;citronellyl-CoA ligase activity&apos; SubClassOf &apos;acid-thiol ligase activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0022882</classIRI>
<classLabel>protein-N(PI)-phosphohistidine-beta-glucoside phosphotransferase system transporter activity</classLabel>
<deletedAxiom>&apos;protein-N(PI)-phosphohistidine-beta-glucoside phosphotransferase system transporter activity&apos; SubClassOf &apos;beta-glucoside transmembrane transporter activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0019244</classIRI>
<classLabel>lactate biosynthetic process from pyruvate</classLabel>
<deletedAxiom>&apos;lactate biosynthetic process from pyruvate&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000051 some &apos;lactate dehydrogenase activity&apos;</deletedAxiom>
<deletedAxiom>&apos;lactate biosynthetic process from pyruvate&apos; SubClassOf &apos;pyruvate metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;lactate biosynthetic process from pyruvate&apos; SubClassOf &apos;lactate biosynthetic process&apos;</deletedAxiom>
<newAxiom>&apos;lactate biosynthetic process from pyruvate&apos; SubClassOf &apos;pyruvate fermentation&apos;</newAxiom>
<newAxiom>&apos;lactate biosynthetic process from pyruvate&apos; SubClassOf &apos;lactate metabolic process&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0019245</classIRI>
<classLabel>D(-)-lactate biosynthetic process from pyruvate</classLabel>
<deletedAxiom>&apos;D(-)-lactate biosynthetic process from pyruvate&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000051 some &apos;D-lactate dehydrogenase (NAD+) activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0019246</classIRI>
<classLabel>L(+)-lactate biosynthetic process from pyruvate</classLabel>
<deletedAxiom>&apos;L(+)-lactate biosynthetic process from pyruvate&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000051 some &apos;L-lactate dehydrogenase (NAD+) activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0032220</classIRI>
<classLabel>plasma membrane fusion involved in cytogamy</classLabel>
<deletedAxiom>&apos;plasma membrane fusion involved in cytogamy&apos; EquivalentTo &apos;plasma membrane fusion&apos; and (http://purl.obolibrary.org/obo/BFO_0000050 some &apos;cytogamy&apos;)</deletedAxiom>
<deletedAxiom>&apos;plasma membrane fusion involved in cytogamy&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000050 some &apos;cytogamy&apos;</deletedAxiom>
<deletedAxiom>&apos;plasma membrane fusion involved in cytogamy&apos; SubClassOf &apos;plasma membrane fusion&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0046854</classIRI>
<classLabel>phosphatidylinositol phosphate biosynthetic process</classLabel>
<deletedAxiom>&apos;phosphatidylinositol phosphate biosynthetic process&apos; SubClassOf &apos;phosphatidylinositol biosynthetic process&apos;</deletedAxiom>
<newAxiom>&apos;phosphatidylinositol phosphate biosynthetic process&apos; SubClassOf &apos;glycerophospholipid biosynthetic process&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0019112</classIRI>
<classLabel>phenanthrol glycosyltransferase activity</classLabel>
<deletedAxiom>&apos;phenanthrol glycosyltransferase activity&apos; SubClassOf &apos;hexosyltransferase activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0019116</classIRI>
<classLabel>hydroxy-nicotine oxidase activity</classLabel>
<deletedAxiom>&apos;hydroxy-nicotine oxidase activity&apos; SubClassOf &apos;oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0007042</classIRI>
<classLabel>lysosomal lumen acidification</classLabel>
<deletedAxiom>&apos;lysosomal lumen acidification&apos; SubClassOf &apos;regulation of lysosomal lumen pH&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0046624</classIRI>
<classLabel>sphingolipid transporter activity</classLabel>
<deletedAxiom>&apos;sphingolipid transporter activity&apos; SubClassOf &apos;lipid transporter activity&apos;</deletedAxiom>
<newAxiom>&apos;sphingolipid transporter activity&apos; SubClassOf &apos;intramembrane lipid transporter activity&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0010602</classIRI>
<classLabel>regulation of 1-aminocyclopropane-1-carboxylate metabolic process</classLabel>
<deletedAxiom>&apos;regulation of 1-aminocyclopropane-1-carboxylate metabolic process&apos; SubClassOf http://purl.obolibrary.org/obo/RO_0002211 some &apos;1-aminocyclopropane-1-carboxylate metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;regulation of 1-aminocyclopropane-1-carboxylate metabolic process&apos; SubClassOf &apos;regulation of small molecule metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;regulation of 1-aminocyclopropane-1-carboxylate metabolic process&apos; SubClassOf &apos;regulation of amino acid metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;regulation of 1-aminocyclopropane-1-carboxylate metabolic process&apos; EquivalentTo &apos;biological regulation&apos; and (http://purl.obolibrary.org/obo/RO_0002211 some &apos;1-aminocyclopropane-1-carboxylate metabolic process&apos;)</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0046516</classIRI>
<classLabel>hypusine metabolic process</classLabel>
<deletedAxiom>&apos;hypusine metabolic process&apos; SubClassOf &apos;metabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0034557</classIRI>
<classLabel>2-hydroxylaminobenzoate reductase activity</classLabel>
<deletedAxiom>&apos;2-hydroxylaminobenzoate reductase activity&apos; SubClassOf &apos;oxidoreductase activity, acting on the CH-NH2 group of donors&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0034548</classIRI>
<classLabel>N-cyclopropylammeline deaminase activity</classLabel>
<deletedAxiom>&apos;N-cyclopropylammeline deaminase activity&apos; SubClassOf &apos;hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0034549</classIRI>
<classLabel>N-cyclopropylammelide alkylamino hydrolase activity</classLabel>
<deletedAxiom>&apos;N-cyclopropylammelide alkylamino hydrolase activity&apos; SubClassOf &apos;hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0034547</classIRI>
<classLabel>N-cyclopropylmelamine deaminase activity</classLabel>
<deletedAxiom>&apos;N-cyclopropylmelamine deaminase activity&apos; SubClassOf &apos;hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0046572</classIRI>
<classLabel>versicolorin B synthase activity</classLabel>
<deletedAxiom>&apos;versicolorin B synthase activity&apos; SubClassOf &apos;carbon-oxygen lyase activity&apos;</deletedAxiom>
<newAxiom>&apos;versicolorin B synthase activity&apos; SubClassOf &apos;hydro-lyase activity&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0010511</classIRI>
<classLabel>regulation of phosphatidylinositol biosynthetic process</classLabel>
<deletedAxiom>&apos;regulation of phosphatidylinositol biosynthetic process&apos; SubClassOf &apos;regulation of phospholipid biosynthetic process&apos;</deletedAxiom>
<newAxiom>&apos;regulation of phosphatidylinositol biosynthetic process&apos; SubClassOf &apos;regulation of biosynthetic process&apos;</newAxiom>
<newAxiom>&apos;regulation of phosphatidylinositol biosynthetic process&apos; SubClassOf &apos;regulation of phosphorus metabolic process&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0010512</classIRI>
<classLabel>negative regulation of phosphatidylinositol biosynthetic process</classLabel>
<deletedAxiom>&apos;negative regulation of phosphatidylinositol biosynthetic process&apos; SubClassOf &apos;negative regulation of phospholipid biosynthetic process&apos;</deletedAxiom>
<newAxiom>&apos;negative regulation of phosphatidylinositol biosynthetic process&apos; SubClassOf &apos;negative regulation of phosphorus metabolic process&apos;</newAxiom>
<newAxiom>&apos;negative regulation of phosphatidylinositol biosynthetic process&apos; SubClassOf &apos;negative regulation of biosynthetic process&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0010513</classIRI>
<classLabel>positive regulation of phosphatidylinositol biosynthetic process</classLabel>
<deletedAxiom>&apos;positive regulation of phosphatidylinositol biosynthetic process&apos; SubClassOf &apos;positive regulation of phospholipid biosynthetic process&apos;</deletedAxiom>
<newAxiom>&apos;positive regulation of phosphatidylinositol biosynthetic process&apos; SubClassOf &apos;positive regulation of biosynthetic process&apos;</newAxiom>
<newAxiom>&apos;positive regulation of phosphatidylinositol biosynthetic process&apos; SubClassOf &apos;positive regulation of phosphorus metabolic process&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0046439</classIRI>
<classLabel>L-cysteine metabolic process</classLabel>
<deletedAxiom>&apos;L-cysteine metabolic process&apos; SubClassOf &apos;L-amino acid metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;L-cysteine metabolic process&apos; SubClassOf &apos;proteinogenic amino acid metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;L-cysteine metabolic process&apos; SubClassOf &apos;cysteine metabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0046436</classIRI>
<classLabel>D-alanine metabolic process</classLabel>
<deletedAxiom>&apos;D-alanine metabolic process&apos; SubClassOf &apos;alanine metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;D-alanine metabolic process&apos; SubClassOf &apos;D-amino acid metabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0046488</classIRI>
<classLabel>phosphatidylinositol metabolic process</classLabel>
<deletedAxiom>&apos;phosphatidylinositol metabolic process&apos; SubClassOf &apos;glycerophospholipid metabolic process&apos;</deletedAxiom>
<newAxiom>&apos;phosphatidylinositol metabolic process&apos; SubClassOf &apos;phosphorus metabolic process&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0046498</classIRI>
<classLabel>S-adenosylhomocysteine metabolic process</classLabel>
<deletedAxiom>&apos;S-adenosylhomocysteine metabolic process&apos; SubClassOf &apos;purine ribonucleoside metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;S-adenosylhomocysteine metabolic process&apos; SubClassOf &apos;L-amino acid metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;S-adenosylhomocysteine metabolic process&apos; SubClassOf &apos;modified amino acid metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;S-adenosylhomocysteine metabolic process&apos; SubClassOf &apos;non-proteinogenic amino acid metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;S-adenosylhomocysteine metabolic process&apos; SubClassOf &apos;sulfur compound metabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0010326</classIRI>
<classLabel>methionine-oxo-acid transaminase activity</classLabel>
<deletedAxiom>&apos;methionine-oxo-acid transaminase activity&apos; SubClassOf &apos;transaminase activity&apos;</deletedAxiom>
<newAxiom>&apos;methionine-oxo-acid transaminase activity&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140385</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0000993</classIRI>
<classLabel>RNA polymerase II complex binding</classLabel>
<deletedAxiom>&apos;RNA polymerase II complex binding&apos; SubClassOf &apos;basal RNA polymerase II transcription machinery binding&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0010355</classIRI>
<classLabel>obsolete homogentisate farnesyltransferase activity</classLabel>
<newAxiom>&apos;obsolete homogentisate farnesyltransferase activity&apos; SubClassOf &apos;homogentisate prenyltransferase activity&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0010367</classIRI>
<classLabel>extracellular isoamylase complex</classLabel>
<deletedAxiom>&apos;extracellular isoamylase complex&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000050 some &apos;extracellular region&apos;</deletedAxiom>
<deletedAxiom>&apos;extracellular isoamylase complex&apos; SubClassOf &apos;isoamylase complex&apos;</deletedAxiom>
<deletedAxiom>&apos;extracellular isoamylase complex&apos; EquivalentTo &apos;isoamylase complex&apos; and (http://purl.obolibrary.org/obo/BFO_0000050 some &apos;extracellular region&apos;)</deletedAxiom>
<newAxiom>&apos;extracellular isoamylase complex&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140392</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0009389</classIRI>
<classLabel>dimethyl sulfoxide reductase activity</classLabel>
<deletedAxiom>&apos;dimethyl sulfoxide reductase activity&apos; SubClassOf &apos;oxidoreductase activity, acting on a sulfur group of donors&apos;</deletedAxiom>
<newAxiom>&apos;dimethyl sulfoxide reductase activity&apos; SubClassOf &apos;oxidoreductase activity, acting on a sulfur group of donors, quinone or similar compound as acceptor&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0009394</classIRI>
<classLabel>2&apos;-deoxyribonucleotide metabolic process</classLabel>
<deletedAxiom>&apos;2&apos;-deoxyribonucleotide metabolic process&apos; SubClassOf &apos;deoxyribonucleotide metabolic process&apos;</deletedAxiom>
<newAxiom>&apos;2&apos;-deoxyribonucleotide metabolic process&apos; SubClassOf &apos;nucleotide metabolic process&apos;</newAxiom>
<newAxiom>&apos;2&apos;-deoxyribonucleotide metabolic process&apos; SubClassOf &apos;carbohydrate derivative metabolic process&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0061936</classIRI>
<classLabel>fusion of sperm to egg plasma membrane involved in double fertilization forming a zygote and endosperm</classLabel>
<deletedAxiom>&apos;fusion of sperm to egg plasma membrane involved in double fertilization forming a zygote and endosperm&apos; SubClassOf &apos;plasma membrane fusion&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0034358</classIRI>
<classLabel>plasma lipoprotein particle</classLabel>
<deletedAxiom>&apos;plasma lipoprotein particle&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000050 some &apos;extracellular space&apos;</deletedAxiom>
<newAxiom>&apos;plasma lipoprotein particle&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140392</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0046357</classIRI>
<classLabel>galactarate biosynthetic process</classLabel>
<newAxiom>&apos;galactarate biosynthetic process&apos; SubClassOf &apos;carbohydrate biosynthetic process&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0046392</classIRI>
<classLabel>galactarate catabolic process</classLabel>
<newAxiom>&apos;galactarate catabolic process&apos; SubClassOf &apos;carbohydrate catabolic process&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0010209</classIRI>
<classLabel>vacuolar sorting signal binding</classLabel>
<deletedAxiom>&apos;vacuolar sorting signal binding&apos; SubClassOf &apos;signal sequence binding&apos;</deletedAxiom>
<newAxiom>&apos;vacuolar sorting signal binding&apos; SubClassOf &apos;cargo receptor activity&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0009223</classIRI>
<classLabel>pyrimidine deoxyribonucleotide catabolic process</classLabel>
<deletedAxiom>&apos;pyrimidine deoxyribonucleotide catabolic process&apos; SubClassOf &apos;deoxyribonucleotide catabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0009262</classIRI>
<classLabel>deoxyribonucleotide metabolic process</classLabel>
<deletedAxiom>&apos;deoxyribonucleotide metabolic process&apos; SubClassOf &apos;carbohydrate derivative metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;deoxyribonucleotide metabolic process&apos; SubClassOf &apos;nucleotide metabolic process&apos;</deletedAxiom>
<newAxiom>&apos;deoxyribonucleotide metabolic process&apos; SubClassOf &apos;metabolic process&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0009265</classIRI>
<classLabel>2&apos;-deoxyribonucleotide biosynthetic process</classLabel>
<deletedAxiom>&apos;2&apos;-deoxyribonucleotide biosynthetic process&apos; SubClassOf &apos;deoxyribonucleotide biosynthetic process&apos;</deletedAxiom>
<newAxiom>&apos;2&apos;-deoxyribonucleotide biosynthetic process&apos; SubClassOf &apos;nucleotide biosynthetic process&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0009263</classIRI>
<classLabel>deoxyribonucleotide biosynthetic process</classLabel>
<deletedAxiom>&apos;deoxyribonucleotide biosynthetic process&apos; SubClassOf &apos;carbohydrate derivative biosynthetic process&apos;</deletedAxiom>
<deletedAxiom>&apos;deoxyribonucleotide biosynthetic process&apos; SubClassOf &apos;nucleotide biosynthetic process&apos;</deletedAxiom>
<newAxiom>&apos;deoxyribonucleotide biosynthetic process&apos; SubClassOf &apos;biosynthetic process&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0009264</classIRI>
<classLabel>deoxyribonucleotide catabolic process</classLabel>
<deletedAxiom>&apos;deoxyribonucleotide catabolic process&apos; SubClassOf &apos;carbohydrate derivative catabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;deoxyribonucleotide catabolic process&apos; SubClassOf &apos;nucleotide catabolic process&apos;</deletedAxiom>
<newAxiom>&apos;deoxyribonucleotide catabolic process&apos; SubClassOf &apos;catabolic process&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0009279</classIRI>
<classLabel>cell outer membrane</classLabel>
<deletedAxiom>&apos;cell outer membrane&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000050 some &apos;external encapsulating structure&apos;</deletedAxiom>
<newAxiom>&apos;cell outer membrane&apos; SubClassOf &apos;external encapsulating structure&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0034242</classIRI>
<classLabel>negative regulation of syncytium formation by plasma membrane fusion</classLabel>
<deletedAxiom>&apos;negative regulation of syncytium formation by plasma membrane fusion&apos; SubClassOf &apos;negative regulation of developmental process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0034235</classIRI>
<classLabel>GPI anchor binding</classLabel>
<deletedAxiom>&apos;GPI anchor binding&apos; SubClassOf &apos;phosphatidylinositol binding&apos;</deletedAxiom>
<newAxiom>&apos;GPI anchor binding&apos; SubClassOf &apos;phospholipid binding&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0034269</classIRI>
<classLabel>discadenine catabolic process</classLabel>
<deletedAxiom>&apos;discadenine catabolic process&apos; SubClassOf &apos;cytokinin catabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;discadenine catabolic process&apos; SubClassOf &apos;purine-containing compound catabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;discadenine catabolic process&apos; SubClassOf &apos;L-amino acid catabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;discadenine catabolic process&apos; SubClassOf &apos;non-proteinogenic amino acid catabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0034268</classIRI>
<classLabel>discadenine biosynthetic process</classLabel>
<deletedAxiom>&apos;discadenine biosynthetic process&apos; SubClassOf &apos;non-proteinogenic amino acid biosynthetic process&apos;</deletedAxiom>
<deletedAxiom>&apos;discadenine biosynthetic process&apos; SubClassOf &apos;cytokinin biosynthetic process&apos;</deletedAxiom>
<deletedAxiom>&apos;discadenine biosynthetic process&apos; SubClassOf &apos;L-amino acid biosynthetic process&apos;</deletedAxiom>
<deletedAxiom>&apos;discadenine biosynthetic process&apos; SubClassOf &apos;purine-containing compound biosynthetic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0046265</classIRI>
<classLabel>thiocyanate catabolic process</classLabel>
<deletedAxiom>&apos;thiocyanate catabolic process&apos; SubClassOf &apos;xenobiotic catabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;thiocyanate catabolic process&apos; SubClassOf &apos;small molecule catabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0000755</classIRI>
<classLabel>cytogamy</classLabel>
<newAxiom>&apos;cytogamy&apos; SubClassOf &apos;cell-cell fusion&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0010129</classIRI>
<classLabel>anaerobic cyclohexane-1-carboxylate catabolic process</classLabel>
<newAxiom>&apos;anaerobic cyclohexane-1-carboxylate catabolic process&apos; SubClassOf &apos;monocarboxylic acid catabolic process&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0009155</classIRI>
<classLabel>purine deoxyribonucleotide catabolic process</classLabel>
<deletedAxiom>&apos;purine deoxyribonucleotide catabolic process&apos; SubClassOf &apos;deoxyribonucleotide catabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0046122</classIRI>
<classLabel>purine deoxyribonucleoside metabolic process</classLabel>
<deletedAxiom>&apos;purine deoxyribonucleoside metabolic process&apos; SubClassOf &apos;deoxyribonucleoside metabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0046124</classIRI>
<classLabel>purine deoxyribonucleoside catabolic process</classLabel>
<deletedAxiom>&apos;purine deoxyribonucleoside catabolic process&apos; SubClassOf &apos;deoxyribonucleoside catabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0046123</classIRI>
<classLabel>purine deoxyribonucleoside biosynthetic process</classLabel>
<deletedAxiom>&apos;purine deoxyribonucleoside biosynthetic process&apos; SubClassOf &apos;deoxyribonucleoside biosynthetic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0061696</classIRI>
<classLabel>pituitary gonadotropin complex</classLabel>
<deletedAxiom>&apos;pituitary gonadotropin complex&apos; SubClassOf &apos;protein-containing complex&apos;</deletedAxiom>
<deletedAxiom>&apos;pituitary gonadotropin complex&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000050 some &apos;extracellular region&apos;</deletedAxiom>
<newAxiom>&apos;pituitary gonadotropin complex&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140392</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0046091</classIRI>
<classLabel>deoxyadenosine biosynthetic process</classLabel>
<newAxiom>&apos;deoxyadenosine biosynthetic process&apos; SubClassOf &apos;deoxyribonucleoside biosynthetic process&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0046094</classIRI>
<classLabel>deoxyinosine metabolic process</classLabel>
<newAxiom>&apos;deoxyinosine metabolic process&apos; SubClassOf &apos;deoxyribonucleoside metabolic process&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0046095</classIRI>
<classLabel>deoxyinosine biosynthetic process</classLabel>
<newAxiom>&apos;deoxyinosine biosynthetic process&apos; SubClassOf &apos;deoxyribonucleoside biosynthetic process&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0046090</classIRI>
<classLabel>deoxyadenosine metabolic process</classLabel>
<newAxiom>&apos;deoxyadenosine metabolic process&apos; SubClassOf &apos;deoxyribonucleoside metabolic process&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0000769</classIRI>
<classLabel>syncytium formation by mitosis without cytokinesis</classLabel>
<deletedAxiom>&apos;syncytium formation by mitosis without cytokinesis&apos; EquivalentTo &apos;syncytium formation&apos; and (http://purl.obolibrary.org/obo/BFO_0000051 some &apos;cell cycle comprising mitosis without cytokinesis&apos;)</deletedAxiom>
<deletedAxiom>&apos;syncytium formation by mitosis without cytokinesis&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000051 some &apos;cell cycle comprising mitosis without cytokinesis&apos;</deletedAxiom>
<deletedAxiom>&apos;syncytium formation by mitosis without cytokinesis&apos; SubClassOf &apos;syncytium formation&apos;</deletedAxiom>
<newAxiom>&apos;syncytium formation by mitosis without cytokinesis&apos; SubClassOf &apos;cell cycle comprising mitosis without cytokinesis&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0000768</classIRI>
<classLabel>syncytium formation by plasma membrane fusion</classLabel>
<deletedAxiom>&apos;syncytium formation by plasma membrane fusion&apos; SubClassOf &apos;syncytium formation&apos;</deletedAxiom>
<deletedAxiom>&apos;syncytium formation by plasma membrane fusion&apos; EquivalentTo &apos;syncytium formation&apos; and (http://purl.obolibrary.org/obo/BFO_0000051 some &apos;plasma membrane fusion&apos;)</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0009001</classIRI>
<classLabel>serine O-acetyltransferase activity</classLabel>
<newAxiom>&apos;serine O-acetyltransferase activity&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140379</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0061607</classIRI>
<classLabel>peptide alpha-N-propionyltransferase activity</classLabel>
<deletedAxiom>&apos;peptide alpha-N-propionyltransferase activity&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000050 some &apos;N-terminal protein amino acid propionylation&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0009042</classIRI>
<classLabel>valine-pyruvate transaminase activity</classLabel>
<deletedAxiom>&apos;valine-pyruvate transaminase activity&apos; SubClassOf &apos;transaminase activity&apos;</deletedAxiom>
<newAxiom>&apos;valine-pyruvate transaminase activity&apos; SubClassOf &apos;alanine-oxo-acid transaminase activity&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0009085</classIRI>
<classLabel>L-lysine biosynthetic process</classLabel>
<deletedAxiom>&apos;L-lysine biosynthetic process&apos; SubClassOf &apos;lysine metabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0009089</classIRI>
<classLabel>L-lysine biosynthetic process via diaminopimelate</classLabel>
<deletedAxiom>&apos;L-lysine biosynthetic process via diaminopimelate&apos; SubClassOf &apos;L-lysine biosynthetic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0009091</classIRI>
<classLabel>L-homoserine catabolic process</classLabel>
<deletedAxiom>&apos;L-homoserine catabolic process&apos; SubClassOf &apos;L-homoserine metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;L-homoserine catabolic process&apos; SubClassOf &apos;non-proteinogenic amino acid catabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;L-homoserine catabolic process&apos; SubClassOf &apos;L-amino acid catabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0009097</classIRI>
<classLabel>isoleucine biosynthetic process</classLabel>
<deletedAxiom>&apos;isoleucine biosynthetic process&apos; SubClassOf &apos;alpha-amino acid biosynthetic process&apos;</deletedAxiom>
<deletedAxiom>&apos;isoleucine biosynthetic process&apos; SubClassOf &apos;isoleucine metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;isoleucine biosynthetic process&apos; SubClassOf &apos;branched-chain amino acid biosynthetic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_2000211</classIRI>
<classLabel>regulation of glutamate metabolic process</classLabel>
<deletedAxiom>&apos;regulation of glutamate metabolic process&apos; SubClassOf &apos;regulation of amino acid metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;regulation of glutamate metabolic process&apos; SubClassOf http://purl.obolibrary.org/obo/RO_0002211 some &apos;glutamate metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;regulation of glutamate metabolic process&apos; EquivalentTo &apos;biological regulation&apos; and (http://purl.obolibrary.org/obo/RO_0002211 some &apos;glutamate metabolic process&apos;)</deletedAxiom>
<deletedAxiom>&apos;regulation of glutamate metabolic process&apos; SubClassOf &apos;regulation of small molecule metabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_2000212</classIRI>
<classLabel>negative regulation of glutamate metabolic process</classLabel>
<deletedAxiom>&apos;negative regulation of glutamate metabolic process&apos; SubClassOf &apos;negative regulation of small molecule metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;negative regulation of glutamate metabolic process&apos; SubClassOf &apos;negative regulation of amino acid metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;negative regulation of glutamate metabolic process&apos; SubClassOf &apos;regulation of glutamate metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;negative regulation of glutamate metabolic process&apos; SubClassOf http://purl.obolibrary.org/obo/RO_0002212 some &apos;glutamate metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;negative regulation of glutamate metabolic process&apos; EquivalentTo &apos;biological regulation&apos; and (http://purl.obolibrary.org/obo/RO_0002212 some &apos;glutamate metabolic process&apos;)</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_2000214</classIRI>
<classLabel>regulation of L-proline metabolic process</classLabel>
<deletedAxiom>&apos;regulation of L-proline metabolic process&apos; EquivalentTo &apos;biological regulation&apos; and (http://purl.obolibrary.org/obo/RO_0002211 some &apos;L-proline metabolic process&apos;)</deletedAxiom>
<deletedAxiom>&apos;regulation of L-proline metabolic process&apos; SubClassOf &apos;regulation of amino acid metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;regulation of L-proline metabolic process&apos; SubClassOf http://purl.obolibrary.org/obo/RO_0002211 some &apos;L-proline metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;regulation of L-proline metabolic process&apos; SubClassOf &apos;regulation of small molecule metabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0061502</classIRI>
<classLabel>early endosome to recycling endosome transport</classLabel>
<deletedAxiom>&apos;early endosome to recycling endosome transport&apos; SubClassOf &apos;vesicle-mediated transport between endosomal compartments&apos;</deletedAxiom>
<deletedAxiom>&apos;early endosome to recycling endosome transport&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000066 some &apos;cytoplasm&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0097401</classIRI>
<classLabel>synaptic vesicle lumen acidification</classLabel>
<newAxiom>&apos;synaptic vesicle lumen acidification&apos; SubClassOf &apos;intercellular transport&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0036426</classIRI>
<classLabel>ditrans, polycis-undecaprenyl-phosphate mannosyltransferase activity</classLabel>
<deletedAxiom>&apos;ditrans, polycis-undecaprenyl-phosphate mannosyltransferase activity&apos; SubClassOf &apos;undecaprenyl-phosphate mannosyltransferase activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0036444</classIRI>
<classLabel>calcium import into the mitochondrion</classLabel>
<newAxiom>&apos;calcium import into the mitochondrion&apos; SubClassOf &apos;intercellular transport&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0120216</classIRI>
<classLabel>matrilin complex</classLabel>
<deletedAxiom>&apos;matrilin complex&apos; SubClassOf &apos;protein-containing complex&apos;</deletedAxiom>
<newAxiom>&apos;matrilin complex&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140392</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0120234</classIRI>
<classLabel>stereocilium coat</classLabel>
<deletedAxiom>&apos;stereocilium coat&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000050 some &apos;stereocilium&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0160007</classIRI>
<classLabel>glutathione import into mitochondrion</classLabel>
<newAxiom>&apos;glutathione import into mitochondrion&apos; SubClassOf &apos;intercellular transport&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0160072</classIRI>
<classLabel>ubiquitin ligase complex scaffold activity</classLabel>
<deletedAxiom>&apos;ubiquitin ligase complex scaffold activity&apos; SubClassOf &apos;protein-macromolecule adaptor activity&apos;</deletedAxiom>
<newAxiom>&apos;ubiquitin ligase complex scaffold activity&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140378</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0051994</classIRI>
<classLabel>P-methyltransferase activity</classLabel>
<deletedAxiom>&apos;P-methyltransferase activity&apos; SubClassOf &apos;methyltransferase activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0051975</classIRI>
<classLabel>L-lysine biosynthetic process via alpha-aminoadipate and saccharopine</classLabel>
<deletedAxiom>&apos;L-lysine biosynthetic process via alpha-aminoadipate and saccharopine&apos; SubClassOf &apos;L-lysine biosynthetic process via aminoadipic acid&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0051976</classIRI>
<classLabel>L-lysine biosynthetic process via alpha-aminoadipate and N2-acetyl-alpha-aminoadipate</classLabel>
<deletedAxiom>&apos;L-lysine biosynthetic process via alpha-aminoadipate and N2-acetyl-alpha-aminoadipate&apos; SubClassOf &apos;L-lysine biosynthetic process via aminoadipic acid&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0051978</classIRI>
<classLabel>lysophospholipid:sodium symporter activity</classLabel>
<deletedAxiom>&apos;lysophospholipid:sodium symporter activity&apos; SubClassOf &apos;phospholipid transporter activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0048266</classIRI>
<classLabel>behavioral response to pain</classLabel>
<deletedAxiom>&apos;behavioral response to pain&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000050 some &apos;response to pain&apos;</deletedAxiom>
<newAxiom>&apos;behavioral response to pain&apos; SubClassOf &apos;response to pain&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0048258</classIRI>
<classLabel>3-ketoglucose-reductase activity</classLabel>
<deletedAxiom>&apos;3-ketoglucose-reductase activity&apos; SubClassOf &apos;oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0048250</classIRI>
<classLabel>iron import into the mitochondrion</classLabel>
<newAxiom>&apos;iron import into the mitochondrion&apos; SubClassOf &apos;intercellular transport&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0120019</classIRI>
<classLabel>phosphatidylcholine transfer activity</classLabel>
<deletedAxiom>&apos;phosphatidylcholine transfer activity&apos; SubClassOf &apos;phosphatidylcholine transporter activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0120016</classIRI>
<classLabel>sphingolipid transfer activity</classLabel>
<deletedAxiom>&apos;sphingolipid transfer activity&apos; SubClassOf &apos;sphingolipid transporter activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0120014</classIRI>
<classLabel>phospholipid transfer activity</classLabel>
<deletedAxiom>&apos;phospholipid transfer activity&apos; SubClassOf &apos;phospholipid transporter activity&apos;</deletedAxiom>
<newAxiom>&apos;phospholipid transfer activity&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000050 some &apos;phospholipid transport&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0120013</classIRI>
<classLabel>lipid transfer activity</classLabel>
<newAxiom>&apos;lipid transfer activity&apos; SubClassOf &apos;transporter activity&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0036249</classIRI>
<classLabel>cadmium ion import into vacuole</classLabel>
<newAxiom>&apos;cadmium ion import into vacuole&apos; SubClassOf &apos;intercellular transport&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0048180</classIRI>
<classLabel>activin complex</classLabel>
<deletedAxiom>&apos;activin complex&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000050 some &apos;extracellular space&apos;</deletedAxiom>
<deletedAxiom>&apos;activin complex&apos; SubClassOf &apos;protein-containing complex&apos;</deletedAxiom>
<newAxiom>&apos;activin complex&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140392</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_1904023</classIRI>
<classLabel>regulation of glucose catabolic process to lactate via pyruvate</classLabel>
<deletedAxiom>&apos;regulation of glucose catabolic process to lactate via pyruvate&apos; SubClassOf http://purl.obolibrary.org/obo/RO_0002211 some &apos;homolactic fermentation&apos;</deletedAxiom>
<deletedAxiom>&apos;regulation of glucose catabolic process to lactate via pyruvate&apos; EquivalentTo &apos;biological regulation&apos; and (http://purl.obolibrary.org/obo/RO_0002211 some &apos;homolactic fermentation&apos;)</deletedAxiom>
<deletedAxiom>&apos;regulation of glucose catabolic process to lactate via pyruvate&apos; SubClassOf &apos;regulation of carbohydrate catabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;regulation of glucose catabolic process to lactate via pyruvate&apos; SubClassOf &apos;regulation of glucose metabolic process&apos;</deletedAxiom>
<newAxiom>&apos;regulation of glucose catabolic process to lactate via pyruvate&apos; EquivalentTo &apos;biological regulation&apos; and (http://purl.obolibrary.org/obo/RO_0002211 some &apos;lactate biosynthetic process from pyruvate&apos;)</newAxiom>
<newAxiom>&apos;regulation of glucose catabolic process to lactate via pyruvate&apos; SubClassOf &apos;regulation of small molecule metabolic process&apos;</newAxiom>
<newAxiom>&apos;regulation of glucose catabolic process to lactate via pyruvate&apos; SubClassOf &apos;regulation of catabolic process&apos;</newAxiom>
<newAxiom>&apos;regulation of glucose catabolic process to lactate via pyruvate&apos; SubClassOf http://purl.obolibrary.org/obo/RO_0002211 some &apos;lactate biosynthetic process from pyruvate&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_1904025</classIRI>
<classLabel>positive regulation of glucose catabolic process to lactate via pyruvate</classLabel>
<deletedAxiom>&apos;positive regulation of glucose catabolic process to lactate via pyruvate&apos; EquivalentTo &apos;biological regulation&apos; and (http://purl.obolibrary.org/obo/RO_0002213 some &apos;homolactic fermentation&apos;)</deletedAxiom>
<deletedAxiom>&apos;positive regulation of glucose catabolic process to lactate via pyruvate&apos; SubClassOf &apos;positive regulation of glucose metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;positive regulation of glucose catabolic process to lactate via pyruvate&apos; SubClassOf http://purl.obolibrary.org/obo/RO_0002213 some &apos;homolactic fermentation&apos;</deletedAxiom>
<newAxiom>&apos;positive regulation of glucose catabolic process to lactate via pyruvate&apos; SubClassOf &apos;positive regulation of small molecule metabolic process&apos;</newAxiom>
<newAxiom>&apos;positive regulation of glucose catabolic process to lactate via pyruvate&apos; SubClassOf http://purl.obolibrary.org/obo/RO_0002213 some &apos;lactate biosynthetic process from pyruvate&apos;</newAxiom>
<newAxiom>&apos;positive regulation of glucose catabolic process to lactate via pyruvate&apos; EquivalentTo &apos;biological regulation&apos; and (http://purl.obolibrary.org/obo/RO_0002213 some &apos;lactate biosynthetic process from pyruvate&apos;)</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_1904024</classIRI>
<classLabel>negative regulation of glucose catabolic process to lactate via pyruvate</classLabel>
<deletedAxiom>&apos;negative regulation of glucose catabolic process to lactate via pyruvate&apos; SubClassOf &apos;negative regulation of carbohydrate metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;negative regulation of glucose catabolic process to lactate via pyruvate&apos; SubClassOf http://purl.obolibrary.org/obo/RO_0002212 some &apos;homolactic fermentation&apos;</deletedAxiom>
<deletedAxiom>&apos;negative regulation of glucose catabolic process to lactate via pyruvate&apos; EquivalentTo &apos;biological regulation&apos; and (http://purl.obolibrary.org/obo/RO_0002212 some &apos;homolactic fermentation&apos;)</deletedAxiom>
<newAxiom>&apos;negative regulation of glucose catabolic process to lactate via pyruvate&apos; EquivalentTo &apos;biological regulation&apos; and (http://purl.obolibrary.org/obo/RO_0002212 some &apos;lactate biosynthetic process from pyruvate&apos;)</newAxiom>
<newAxiom>&apos;negative regulation of glucose catabolic process to lactate via pyruvate&apos; SubClassOf http://purl.obolibrary.org/obo/RO_0002212 some &apos;lactate biosynthetic process from pyruvate&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0160218</classIRI>
<classLabel>negative regulation of pyruvate decarboxylation to acetyl-CoA</classLabel>
<deletedAxiom>&apos;negative regulation of pyruvate decarboxylation to acetyl-CoA&apos; SubClassOf &apos;negative regulation of phosphate metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;negative regulation of pyruvate decarboxylation to acetyl-CoA&apos; SubClassOf &apos;negative regulation of nucleobase-containing compound metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;negative regulation of pyruvate decarboxylation to acetyl-CoA&apos; SubClassOf &apos;negative regulation of biosynthetic process&apos;</deletedAxiom>
<deletedAxiom>&apos;negative regulation of pyruvate decarboxylation to acetyl-CoA&apos; SubClassOf &apos;negative regulation of small molecule metabolic process&apos;</deletedAxiom>
<newAxiom>&apos;negative regulation of pyruvate decarboxylation to acetyl-CoA&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140391</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0160270</classIRI>
<classLabel>phosphatidylserine-phosphatidylinositol-4-phosphate exchange activity</classLabel>
<deletedAxiom>&apos;phosphatidylserine-phosphatidylinositol-4-phosphate exchange activity&apos; SubClassOf &apos;phosphatidylinositol transfer activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0160291</classIRI>
<classLabel>phosphatidylinositol-4-phosphate-cholesterol exchange activity</classLabel>
<deletedAxiom>&apos;phosphatidylinositol-4-phosphate-cholesterol exchange activity&apos; SubClassOf &apos;phosphatidylinositol transfer activity&apos;</deletedAxiom>
<newAxiom>&apos;phosphatidylinositol-4-phosphate-cholesterol exchange activity&apos; SubClassOf &apos;phospholipid transfer activity&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0099614</classIRI>
<classLabel>protein localization to spore cell wall</classLabel>
<deletedAxiom>&apos;protein localization to spore cell wall&apos; SubClassOf &apos;protein localization to cell periphery&apos;</deletedAxiom>
<newAxiom>&apos;protein localization to spore cell wall&apos; SubClassOf &apos;intracellular protein localization&apos;</newAxiom>
<newAxiom>&apos;protein localization to spore cell wall&apos; SubClassOf &apos;protein localization to extracellular region&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0099613</classIRI>
<classLabel>protein localization to cell wall</classLabel>
<deletedAxiom>&apos;protein localization to cell wall&apos; SubClassOf &apos;protein localization to cell periphery&apos;</deletedAxiom>
<newAxiom>&apos;protein localization to cell wall&apos; SubClassOf &apos;intracellular protein localization&apos;</newAxiom>
<newAxiom>&apos;protein localization to cell wall&apos; SubClassOf &apos;protein localization to extracellular region&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0048046</classIRI>
<classLabel>apoplast</classLabel>
<deletedAxiom>&apos;apoplast&apos; SubClassOf &apos;extracellular region&apos;</deletedAxiom>
<newAxiom>&apos;apoplast&apos; SubClassOf &apos;cellular anatomical structure&apos;</newAxiom>
<newAxiom>&apos;apoplast&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000050 some &apos;extracellular region&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0036088</classIRI>
<classLabel>D-serine catabolic process</classLabel>
<deletedAxiom>&apos;D-serine catabolic process&apos; SubClassOf &apos;D-serine metabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_1990063</classIRI>
<classLabel>Bam protein complex</classLabel>
<newAxiom>&apos;Bam protein complex&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140392</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0097052</classIRI>
<classLabel>L-kynurenine metabolic process</classLabel>
<deletedAxiom>&apos;L-kynurenine metabolic process&apos; SubClassOf &apos;L-amino acid metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;L-kynurenine metabolic process&apos; SubClassOf &apos;kynurenine metabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0097053</classIRI>
<classLabel>L-kynurenine catabolic process</classLabel>
<deletedAxiom>&apos;L-kynurenine catabolic process&apos; SubClassOf &apos;L-kynurenine metabolic process&apos;</deletedAxiom>
<newAxiom>&apos;L-kynurenine catabolic process&apos; SubClassOf &apos;kynurenine metabolic process&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0000105</classIRI>
<classLabel>L-histidine biosynthetic process</classLabel>
<deletedAxiom>&apos;L-histidine biosynthetic process&apos; SubClassOf &apos;L-histidine metabolic process&apos;</deletedAxiom>
<newAxiom>&apos;L-histidine biosynthetic process&apos; SubClassOf &apos;imidazole-containing compound metabolic process&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0097058</classIRI>
<classLabel>CRLF-CLCF1 complex</classLabel>
<deletedAxiom>&apos;CRLF-CLCF1 complex&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000050 some &apos;extracellular region&apos;</deletedAxiom>
<deletedAxiom>&apos;CRLF-CLCF1 complex&apos; SubClassOf &apos;protein-containing complex&apos;</deletedAxiom>
<newAxiom>&apos;CRLF-CLCF1 complex&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140392</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0097059</classIRI>
<classLabel>CNTFR-CLCF1 complex</classLabel>
<deletedAxiom>&apos;CNTFR-CLCF1 complex&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000050 some &apos;extracellular region&apos;</deletedAxiom>
<deletedAxiom>&apos;CNTFR-CLCF1 complex&apos; SubClassOf &apos;protein-containing complex&apos;</deletedAxiom>
<newAxiom>&apos;CNTFR-CLCF1 complex&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140392</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0160320</classIRI>
<classLabel>protein-tyrosine iodotransferase activity</classLabel>
<deletedAxiom>&apos;protein-tyrosine iodotransferase activity&apos; SubClassOf &apos;haloperoxidase activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0051600</classIRI>
<classLabel>regulation of endocytosis by exocyst localization</classLabel>
<deletedAxiom>&apos;regulation of endocytosis by exocyst localization&apos; EquivalentTo &apos;exocyst localization&apos; and (http://purl.obolibrary.org/obo/RO_0002211 some &apos;endocytosis&apos;)</deletedAxiom>
<deletedAxiom>&apos;regulation of endocytosis by exocyst localization&apos; SubClassOf &apos;regulation of endocytosis&apos;</deletedAxiom>
<deletedAxiom>&apos;regulation of endocytosis by exocyst localization&apos; SubClassOf &apos;exocyst localization&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0000053</classIRI>
<classLabel>argininosuccinate metabolic process</classLabel>
<deletedAxiom>&apos;argininosuccinate metabolic process&apos; SubClassOf &apos;non-proteinogenic amino acid metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;argininosuccinate metabolic process&apos; SubClassOf &apos;tricarboxylic acid metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;argininosuccinate metabolic process&apos; SubClassOf &apos;modified amino acid metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;argininosuccinate metabolic process&apos; SubClassOf &apos;L-amino acid metabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_1990181</classIRI>
<classLabel>acetyl-CoA biosynthetic process from pantothenate</classLabel>
<deletedAxiom>&apos;acetyl-CoA biosynthetic process from pantothenate&apos; SubClassOf &apos;acetyl-CoA biosynthetic process&apos;</deletedAxiom>
<deletedAxiom>&apos;acetyl-CoA biosynthetic process from pantothenate&apos; SubClassOf &apos;pantothenate metabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0099544</classIRI>
<classLabel>perisynaptic space</classLabel>
<deletedAxiom>&apos;perisynaptic space&apos; SubClassOf &apos;extracellular region&apos;</deletedAxiom>
<newAxiom>&apos;perisynaptic space&apos; SubClassOf &apos;cellular anatomical structure&apos;</newAxiom>
<newAxiom>&apos;perisynaptic space&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000050 some &apos;extracellular region&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_1990326</classIRI>
<classLabel>collagen type XXVIII trimer</classLabel>
<newAxiom>&apos;collagen type XXVIII trimer&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140392</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_1990324</classIRI>
<classLabel>collagen type XXVI trimer</classLabel>
<newAxiom>&apos;collagen type XXVI trimer&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140392</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_1990318</classIRI>
<classLabel>collagen type XIX trimer</classLabel>
<newAxiom>&apos;collagen type XIX trimer&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140392</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_1990341</classIRI>
<classLabel>thrombospondin complex</classLabel>
<deletedAxiom>&apos;thrombospondin complex&apos; SubClassOf &apos;protein-containing complex&apos;</deletedAxiom>
<newAxiom>&apos;thrombospondin complex&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140392</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0051453</classIRI>
<classLabel>regulation of intracellular pH</classLabel>
<deletedAxiom>&apos;regulation of intracellular pH&apos; SubClassOf &apos;regulation of cellular pH&apos;</deletedAxiom>
<newAxiom>&apos;regulation of intracellular pH&apos; SubClassOf &apos;regulation of pH&apos;</newAxiom>
<newAxiom>&apos;regulation of intracellular pH&apos; SubClassOf &apos;intracellular monoatomic cation homeostasis&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_1903101</classIRI>
<classLabel>1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate catabolic process</classLabel>
<deletedAxiom>&apos;1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate catabolic process&apos; SubClassOf &apos;phosphatidylinositol catabolic process&apos;</deletedAxiom>
<newAxiom>&apos;1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate catabolic process&apos; SubClassOf &apos;glycerophospholipid catabolic process&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_1903100</classIRI>
<classLabel>1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate metabolic process</classLabel>
<deletedAxiom>&apos;1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate metabolic process&apos; SubClassOf &apos;phosphatidylinositol metabolic process&apos;</deletedAxiom>
<newAxiom>&apos;1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate metabolic process&apos; SubClassOf &apos;glycerophospholipid metabolic process&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0170037</classIRI>
<classLabel>export from the mitochondrion</classLabel>
<newAxiom>&apos;export from the mitochondrion&apos; SubClassOf &apos;intercellular transport&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0170036</classIRI>
<classLabel>import into the mitochondrion</classLabel>
<newAxiom>&apos;import into the mitochondrion&apos; SubClassOf &apos;intercellular transport&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0110141</classIRI>
<classLabel>L-glutamate import into mitochondrion</classLabel>
<newAxiom>&apos;L-glutamate import into mitochondrion&apos; SubClassOf &apos;intercellular transport&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0170045</classIRI>
<classLabel>isopentenyl pyrophosphate transmembrane transporter activity</classLabel>
<deletedAxiom>&apos;isopentenyl pyrophosphate transmembrane transporter activity&apos; SubClassOf &apos;phospholipid transporter activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0110157</classIRI>
<classLabel>reelin complex</classLabel>
<deletedAxiom>&apos;reelin complex&apos; SubClassOf &apos;protein-containing complex&apos;</deletedAxiom>
<deletedAxiom>&apos;reelin complex&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000050 some &apos;extracellular space&apos;</deletedAxiom>
<newAxiom>&apos;reelin complex&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140392</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0170063</classIRI>
<classLabel>transmembrane transport from lysosomal lumen to cytosol</classLabel>
<newAxiom>&apos;transmembrane transport from lysosomal lumen to cytosol&apos; SubClassOf &apos;intercellular transport&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0170055</classIRI>
<classLabel>lipid transmembrane transporter activity</classLabel>
<deletedAxiom>&apos;lipid transmembrane transporter activity&apos; SubClassOf &apos;lipid transporter activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0016942</classIRI>
<classLabel>insulin-like growth factor binding protein complex</classLabel>
<deletedAxiom>&apos;insulin-like growth factor binding protein complex&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000050 some &apos;extracellular space&apos;</deletedAxiom>
<newAxiom>&apos;insulin-like growth factor binding protein complex&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140392</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0170067</classIRI>
<classLabel>L-arginine biosynthetic process via N-acetyl-L-citrulline</classLabel>
<deletedAxiom>&apos;L-arginine biosynthetic process via N-acetyl-L-citrulline&apos; SubClassOf &apos;L-arginine biosynthetic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0016979</classIRI>
<classLabel>lipoate-protein ligase activity</classLabel>
<deletedAxiom>&apos;lipoate-protein ligase activity&apos; SubClassOf &apos;ligase activity, forming carbon-nitrogen bonds&apos;</deletedAxiom>
<deletedAxiom>&apos;lipoate-protein ligase activity&apos; SubClassOf &apos;nucleotidyltransferase activity&apos;</deletedAxiom>
<newAxiom>&apos;lipoate-protein ligase activity&apos; SubClassOf &apos;acid-ammonia (or amide) ligase activity&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0051209</classIRI>
<classLabel>release of sequestered calcium ion into cytosol</classLabel>
<newAxiom>&apos;release of sequestered calcium ion into cytosol&apos; SubClassOf &apos;intercellular transport&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_1903212</classIRI>
<classLabel>protein localization to mating-type region heterochromatin</classLabel>
<deletedAxiom>&apos;protein localization to mating-type region heterochromatin&apos; SubClassOf &apos;protein localization to heterochromatin&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0051267</classIRI>
<classLabel>CP2 mannose-ethanolamine phosphotransferase activity</classLabel>
<deletedAxiom>&apos;CP2 mannose-ethanolamine phosphotransferase activity&apos; SubClassOf &apos;mannose-ethanolamine phosphotransferase activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0051266</classIRI>
<classLabel>sirohydrochlorin ferrochelatase activity</classLabel>
<deletedAxiom>&apos;sirohydrochlorin ferrochelatase activity&apos; SubClassOf &apos;ferrochelatase activity&apos;</deletedAxiom>
<newAxiom>&apos;sirohydrochlorin ferrochelatase activity&apos; SubClassOf &apos;lyase activity&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_1903266</classIRI>
<classLabel>regulation of ornithine catabolic process</classLabel>
<deletedAxiom>&apos;regulation of ornithine catabolic process&apos; SubClassOf &apos;regulation of ornithine metabolic process&apos;</deletedAxiom>
<newAxiom>&apos;regulation of ornithine catabolic process&apos; SubClassOf &apos;regulation of small molecule metabolic process&apos;</newAxiom>
<newAxiom>&apos;regulation of ornithine catabolic process&apos; SubClassOf &apos;regulation of amino acid metabolic process&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0099180</classIRI>
<classLabel>zinc ion import into synaptic vesicle</classLabel>
<newAxiom>&apos;zinc ion import into synaptic vesicle&apos; SubClassOf &apos;intercellular transport&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0110035</classIRI>
<classLabel>rDNA spacer replication fork barrier binding, bending</classLabel>
<deletedAxiom>&apos;rDNA spacer replication fork barrier binding, bending&apos; SubClassOf &apos;sequence-specific DNA binding, bending&apos;</deletedAxiom>
<deletedAxiom>&apos;rDNA spacer replication fork barrier binding, bending&apos; SubClassOf &apos;rDNA spacer replication fork barrier binding&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0016847</classIRI>
<classLabel>1-aminocyclopropane-1-carboxylate synthase activity</classLabel>
<deletedAxiom>&apos;1-aminocyclopropane-1-carboxylate synthase activity&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000050 some &apos;1-aminocyclopropane-1-carboxylate biosynthetic process&apos;</deletedAxiom>
<newAxiom>&apos;1-aminocyclopropane-1-carboxylate synthase activity&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000050 some &apos;ethylene biosynthetic process&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0089703</classIRI>
<classLabel>L-aspartate transmembrane export from vacuole</classLabel>
<newAxiom>&apos;L-aspartate transmembrane export from vacuole&apos; SubClassOf &apos;intercellular transport&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0089705</classIRI>
<classLabel>protein localization to outer membrane</classLabel>
<deletedAxiom>&apos;protein localization to outer membrane&apos; SubClassOf &apos;protein localization to cell periphery&apos;</deletedAxiom>
<newAxiom>&apos;protein localization to outer membrane&apos; SubClassOf &apos;protein localization to extracellular region&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0051108</classIRI>
<classLabel>carnitine-CoA ligase activity</classLabel>
<deletedAxiom>&apos;carnitine-CoA ligase activity&apos; SubClassOf &apos;acid-amino acid ligase activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0051168</classIRI>
<classLabel>nuclear export</classLabel>
<newAxiom>&apos;nuclear export&apos; SubClassOf &apos;intercellular transport&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0051170</classIRI>
<classLabel>import into nucleus</classLabel>
<newAxiom>&apos;import into nucleus&apos; SubClassOf &apos;intercellular transport&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0090733</classIRI>
<classLabel>tenascin complex</classLabel>
<newAxiom>&apos;tenascin complex&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140392</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0099126</classIRI>
<classLabel>transforming growth factor beta complex</classLabel>
<deletedAxiom>&apos;transforming growth factor beta complex&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000050 some &apos;extracellular region&apos;</deletedAxiom>
<deletedAxiom>&apos;transforming growth factor beta complex&apos; SubClassOf &apos;protein-containing complex&apos;</deletedAxiom>
<newAxiom>&apos;transforming growth factor beta complex&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140392</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0099074</classIRI>
<classLabel>mitochondrion to lysosome vesicle-mediated transport</classLabel>
<newAxiom>&apos;mitochondrion to lysosome vesicle-mediated transport&apos; SubClassOf &apos;intercellular transport&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0099076</classIRI>
<classLabel>mitochondrion to peroxisome vesicle-mediated transport</classLabel>
<newAxiom>&apos;mitochondrion to peroxisome vesicle-mediated transport&apos; SubClassOf &apos;intercellular transport&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0004760</classIRI>
<classLabel>L-serine-pyruvate transaminase activity</classLabel>
<deletedAxiom>&apos;L-serine-pyruvate transaminase activity&apos; SubClassOf &apos;transaminase activity&apos;</deletedAxiom>
<newAxiom>&apos;L-serine-pyruvate transaminase activity&apos; SubClassOf &apos;alanine-oxo-acid transaminase activity&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_1903513</classIRI>
<classLabel>endoplasmic reticulum to cytosol transport</classLabel>
<newAxiom>&apos;endoplasmic reticulum to cytosol transport&apos; SubClassOf &apos;intercellular transport&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0004774</classIRI>
<classLabel>succinate-CoA ligase activity</classLabel>
<deletedAxiom>&apos;succinate-CoA ligase activity&apos; SubClassOf &apos;acid-thiol ligase activity&apos;</deletedAxiom>
<newAxiom>&apos;succinate-CoA ligase activity&apos; SubClassOf &apos;CoA-ligase activity&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0004783</classIRI>
<classLabel>sulfite reductase (NADPH) activity</classLabel>
<deletedAxiom>&apos;sulfite reductase (NADPH) activity&apos; SubClassOf &apos;sulfite reductase activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_1903415</classIRI>
<classLabel>flavonoid transport from endoplasmic reticulum to plant-type vacuole</classLabel>
<deletedAxiom>&apos;flavonoid transport from endoplasmic reticulum to plant-type vacuole&apos; SubClassOf &apos;transport&apos;</deletedAxiom>
<newAxiom>&apos;flavonoid transport from endoplasmic reticulum to plant-type vacuole&apos; SubClassOf &apos;intercellular transport&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0090590</classIRI>
<classLabel>protein-N(PI)-phosphohistidine-D-glucosamine phosphotransferase system transporter activity</classLabel>
<deletedAxiom>&apos;protein-N(PI)-phosphohistidine-D-glucosamine phosphotransferase system transporter activity&apos; SubClassOf &apos;protein-N(PI)-phosphohistidine-sugar phosphotransferase activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_1903559</classIRI>
<classLabel>3-cyano-L-alanine catabolic process</classLabel>
<deletedAxiom>&apos;3-cyano-L-alanine catabolic process&apos; SubClassOf &apos;nitrile catabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;3-cyano-L-alanine catabolic process&apos; SubClassOf &apos;L-amino acid catabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;3-cyano-L-alanine catabolic process&apos; SubClassOf &apos;non-proteinogenic amino acid catabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_1903560</classIRI>
<classLabel>3-cyano-L-alanine biosynthetic process</classLabel>
<deletedAxiom>&apos;3-cyano-L-alanine biosynthetic process&apos; SubClassOf &apos;non-proteinogenic amino acid biosynthetic process&apos;</deletedAxiom>
<deletedAxiom>&apos;3-cyano-L-alanine biosynthetic process&apos; SubClassOf &apos;nitrile biosynthetic process&apos;</deletedAxiom>
<deletedAxiom>&apos;3-cyano-L-alanine biosynthetic process&apos; SubClassOf &apos;L-amino acid biosynthetic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0090556</classIRI>
<classLabel>phosphatidylserine floppase activity</classLabel>
<deletedAxiom>&apos;phosphatidylserine floppase activity&apos; SubClassOf &apos;phospholipid transporter activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0090455</classIRI>
<classLabel>ornithine transmembrane import into vacuole</classLabel>
<newAxiom>&apos;ornithine transmembrane import into vacuole&apos; SubClassOf &apos;intercellular transport&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0102953</classIRI>
<classLabel>hypoglycin A gamma-glutamyl transpeptidase activity</classLabel>
<deletedAxiom>&apos;hypoglycin A gamma-glutamyl transpeptidase activity&apos; SubClassOf &apos;aminoacyltransferase activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0102947</classIRI>
<classLabel>(+)-delta-cadinene-8-hydroxylase activity</classLabel>
<deletedAxiom>&apos;(+)-delta-cadinene-8-hydroxylase activity&apos; SubClassOf &apos;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0102937</classIRI>
<classLabel>16-alpha-hydroxygypsogenate-UDP-glucosyltransferase activity</classLabel>
<deletedAxiom>&apos;16-alpha-hydroxygypsogenate-UDP-glucosyltransferase activity&apos; SubClassOf &apos;hexosyltransferase activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0004505</classIRI>
<classLabel>phenylalanine 4-monooxygenase activity</classLabel>
<deletedAxiom>&apos;phenylalanine 4-monooxygenase activity&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000050 some &apos;L-tyrosine biosynthetic process, by oxidation of phenylalanine&apos;</deletedAxiom>
<newAxiom>&apos;phenylalanine 4-monooxygenase activity&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000050 some &apos;L-tyrosine biosynthetic process&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0016430</classIRI>
<classLabel>tRNA (adenine-N6)-methyltransferase activity</classLabel>
<deletedAxiom>&apos;tRNA (adenine-N6)-methyltransferase activity&apos; SubClassOf &apos;N-methyltransferase activity&apos;</deletedAxiom>
<deletedAxiom>&apos;tRNA (adenine-N6)-methyltransferase activity&apos; SubClassOf &apos;tRNA (adenine) methyltransferase activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_1901052</classIRI>
<classLabel>sarcosine metabolic process</classLabel>
<deletedAxiom>&apos;sarcosine metabolic process&apos; SubClassOf &apos;modified amino acid metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;sarcosine metabolic process&apos; SubClassOf &apos;alpha-amino acid metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;sarcosine metabolic process&apos; SubClassOf &apos;non-proteinogenic amino acid metabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_1901053</classIRI>
<classLabel>sarcosine catabolic process</classLabel>
<deletedAxiom>&apos;sarcosine catabolic process&apos; SubClassOf &apos;modified amino acid catabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;sarcosine catabolic process&apos; SubClassOf &apos;alpha-amino acid catabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;sarcosine catabolic process&apos; SubClassOf &apos;sarcosine metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;sarcosine catabolic process&apos; SubClassOf &apos;non-proteinogenic amino acid catabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_1901054</classIRI>
<classLabel>sarcosine biosynthetic process</classLabel>
<deletedAxiom>&apos;sarcosine biosynthetic process&apos; SubClassOf &apos;modified amino acid biosynthetic process&apos;</deletedAxiom>
<deletedAxiom>&apos;sarcosine biosynthetic process&apos; SubClassOf &apos;sarcosine metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;sarcosine biosynthetic process&apos; SubClassOf &apos;non-proteinogenic amino acid biosynthetic process&apos;</deletedAxiom>
<deletedAxiom>&apos;sarcosine biosynthetic process&apos; SubClassOf &apos;alpha-amino acid biosynthetic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0090414</classIRI>
<classLabel>molybdate ion export from vacuole</classLabel>
<newAxiom>&apos;molybdate ion export from vacuole&apos; SubClassOf &apos;intercellular transport&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0090358</classIRI>
<classLabel>positive regulation of L-tryptophan metabolic process</classLabel>
<deletedAxiom>&apos;positive regulation of L-tryptophan metabolic process&apos; SubClassOf &apos;regulation of L-tryptophan metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;positive regulation of L-tryptophan metabolic process&apos; EquivalentTo &apos;biological regulation&apos; and (http://purl.obolibrary.org/obo/RO_0002213 some &apos;L-tryptophan metabolic process&apos;)</deletedAxiom>
<deletedAxiom>&apos;positive regulation of L-tryptophan metabolic process&apos; SubClassOf http://purl.obolibrary.org/obo/RO_0002213 some &apos;L-tryptophan metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;positive regulation of L-tryptophan metabolic process&apos; SubClassOf &apos;positive regulation of amino acid metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;positive regulation of L-tryptophan metabolic process&apos; SubClassOf &apos;positive regulation of small molecule metabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0090357</classIRI>
<classLabel>regulation of L-tryptophan metabolic process</classLabel>
<deletedAxiom>&apos;regulation of L-tryptophan metabolic process&apos; SubClassOf http://purl.obolibrary.org/obo/RO_0002211 some &apos;L-tryptophan metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;regulation of L-tryptophan metabolic process&apos; EquivalentTo &apos;biological regulation&apos; and (http://purl.obolibrary.org/obo/RO_0002211 some &apos;L-tryptophan metabolic process&apos;)</deletedAxiom>
<deletedAxiom>&apos;regulation of L-tryptophan metabolic process&apos; SubClassOf &apos;regulation of amino acid metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;regulation of L-tryptophan metabolic process&apos; SubClassOf &apos;regulation of small molecule metabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_1903803</classIRI>
<classLabel>L-glutamine import across plasma membrane</classLabel>
<deletedAxiom>&apos;L-glutamine import across plasma membrane&apos; SubClassOf &apos;organic cation transport&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0090374</classIRI>
<classLabel>oligopeptide export from mitochondrion</classLabel>
<newAxiom>&apos;oligopeptide export from mitochondrion&apos; SubClassOf &apos;intercellular transport&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0090368</classIRI>
<classLabel>regulation of ornithine metabolic process</classLabel>
<deletedAxiom>&apos;regulation of ornithine metabolic process&apos; SubClassOf &apos;regulation of small molecule metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;regulation of ornithine metabolic process&apos; SubClassOf &apos;regulation of amino acid metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;regulation of ornithine metabolic process&apos; EquivalentTo &apos;biological regulation&apos; and (http://purl.obolibrary.org/obo/RO_0002211 some &apos;ornithine metabolic process&apos;)</deletedAxiom>
<deletedAxiom>&apos;regulation of ornithine metabolic process&apos; SubClassOf http://purl.obolibrary.org/obo/RO_0002211 some &apos;ornithine metabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0102818</classIRI>
<classLabel>lycopene cleavage oxygenase activity</classLabel>
<deletedAxiom>&apos;lycopene cleavage oxygenase activity&apos; SubClassOf &apos;oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0004400</classIRI>
<classLabel>histidinol-phosphate transaminase activity</classLabel>
<deletedAxiom>&apos;histidinol-phosphate transaminase activity&apos; SubClassOf &apos;transaminase activity&apos;</deletedAxiom>
<newAxiom>&apos;histidinol-phosphate transaminase activity&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140385</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0016405</classIRI>
<classLabel>CoA-ligase activity</classLabel>
<deletedAxiom>&apos;CoA-ligase activity&apos; SubClassOf &apos;ligase activity, forming carbon-sulfur bonds&apos;</deletedAxiom>
<newAxiom>&apos;CoA-ligase activity&apos; SubClassOf &apos;acid-thiol ligase activity&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0043911</classIRI>
<classLabel>D-lysine transaminase activity</classLabel>
<deletedAxiom>&apos;D-lysine transaminase activity&apos; SubClassOf &apos;transaminase activity&apos;</deletedAxiom>
<newAxiom>&apos;D-lysine transaminase activity&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140385</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0043914</classIRI>
<classLabel>NADPH:sulfur oxidoreductase activity</classLabel>
<deletedAxiom>&apos;NADPH:sulfur oxidoreductase activity&apos; SubClassOf &apos;oxidoreductase activity, acting on a sulfur group of donors&apos;</deletedAxiom>
<newAxiom>&apos;NADPH:sulfur oxidoreductase activity&apos; SubClassOf &apos;oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_2000013</classIRI>
<classLabel>regulation of arginine biosynthetic process via ornithine</classLabel>
<deletedAxiom>&apos;regulation of arginine biosynthetic process via ornithine&apos; SubClassOf &apos;regulation of arginine biosynthetic process&apos;</deletedAxiom>
<deletedAxiom>&apos;regulation of arginine biosynthetic process via ornithine&apos; SubClassOf http://purl.obolibrary.org/obo/RO_0002211 some &apos;L-arginine biosynthetic process via ornithine&apos;</deletedAxiom>
<deletedAxiom>&apos;regulation of arginine biosynthetic process via ornithine&apos; EquivalentTo &apos;biological regulation&apos; and (http://purl.obolibrary.org/obo/RO_0002211 some &apos;L-arginine biosynthetic process via ornithine&apos;)</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0004360</classIRI>
<classLabel>glutamine-fructose-6-phosphate transaminase (isomerizing) activity</classLabel>
<deletedAxiom>&apos;glutamine-fructose-6-phosphate transaminase (isomerizing) activity&apos; SubClassOf &apos;L-glutamine aminotransferase activity&apos;</deletedAxiom>
<newAxiom>&apos;glutamine-fructose-6-phosphate transaminase (isomerizing) activity&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140385</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0043960</classIRI>
<classLabel>L-erythro-3-methylmalyl-CoA dehydratase activity</classLabel>
<deletedAxiom>&apos;L-erythro-3-methylmalyl-CoA dehydratase activity&apos; SubClassOf &apos;hydro-lyase activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0043955</classIRI>
<classLabel>3-hydroxypropionyl-CoA synthetase activity</classLabel>
<deletedAxiom>&apos;3-hydroxypropionyl-CoA synthetase activity&apos; SubClassOf &apos;acid-thiol ligase activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0180042</classIRI>
<classLabel>polyphosphate import into vacuole</classLabel>
<newAxiom>&apos;polyphosphate import into vacuole&apos; SubClassOf &apos;intercellular transport&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0102762</classIRI>
<classLabel>eriodictyol 4&apos;-O-methyltransferase activity</classLabel>
<deletedAxiom>&apos;eriodictyol 4&apos;-O-methyltransferase activity&apos; SubClassOf &apos;methyltransferase activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0006949</classIRI>
<classLabel>syncytium formation</classLabel>
<deletedAxiom>&apos;syncytium formation&apos; SubClassOf &apos;anatomical structure formation involved in morphogenesis&apos;</deletedAxiom>
<deletedAxiom>&apos;syncytium formation&apos; SubClassOf &apos;cellular process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0018969</classIRI>
<classLabel>thiocyanate metabolic process</classLabel>
<deletedAxiom>&apos;thiocyanate metabolic process&apos; SubClassOf &apos;organic acid metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;thiocyanate metabolic process&apos; SubClassOf &apos;xenobiotic metabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0018855</classIRI>
<classLabel>2-oxo-delta3-4,5,5-trimethylcyclopentenylacetyl-CoA synthetase activity</classLabel>
<deletedAxiom>&apos;2-oxo-delta3-4,5,5-trimethylcyclopentenylacetyl-CoA synthetase activity&apos; SubClassOf &apos;acid-thiol ligase activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0018856</classIRI>
<classLabel>benzoyl acetate-CoA ligase activity</classLabel>
<deletedAxiom>&apos;benzoyl acetate-CoA ligase activity&apos; SubClassOf &apos;CoA-ligase activity&apos;</deletedAxiom>
<deletedAxiom>&apos;benzoyl acetate-CoA ligase activity&apos; SubClassOf &apos;acid-thiol ligase activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0018858</classIRI>
<classLabel>benzoate-CoA ligase activity</classLabel>
<deletedAxiom>&apos;benzoate-CoA ligase activity&apos; SubClassOf &apos;acid-thiol ligase activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0018859</classIRI>
<classLabel>4-hydroxybenzoate-CoA ligase activity</classLabel>
<deletedAxiom>&apos;4-hydroxybenzoate-CoA ligase activity&apos; SubClassOf &apos;acid-thiol ligase activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0018860</classIRI>
<classLabel>anthranilate-CoA ligase activity</classLabel>
<deletedAxiom>&apos;anthranilate-CoA ligase activity&apos; SubClassOf &apos;acid-thiol ligase activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0018861</classIRI>
<classLabel>4-chlorobenzoate-CoA ligase activity</classLabel>
<deletedAxiom>&apos;4-chlorobenzoate-CoA ligase activity&apos; SubClassOf &apos;acid-thiol ligase activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0016207</classIRI>
<classLabel>4-coumarate-CoA ligase activity</classLabel>
<deletedAxiom>&apos;4-coumarate-CoA ligase activity&apos; SubClassOf &apos;acid-thiol ligase activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0006888</classIRI>
<classLabel>endoplasmic reticulum to Golgi vesicle-mediated transport</classLabel>
<newAxiom>&apos;endoplasmic reticulum to Golgi vesicle-mediated transport&apos; SubClassOf &apos;intercellular transport&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0018870</classIRI>
<classLabel>anaerobic 2-aminobenzoate metabolic process</classLabel>
<deletedAxiom>&apos;anaerobic 2-aminobenzoate metabolic process&apos; SubClassOf &apos;anthranilate metabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0018871</classIRI>
<classLabel>1-aminocyclopropane-1-carboxylate metabolic process</classLabel>
<deletedAxiom>&apos;1-aminocyclopropane-1-carboxylate metabolic process&apos; SubClassOf &apos;non-proteinogenic amino acid metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;1-aminocyclopropane-1-carboxylate metabolic process&apos; SubClassOf &apos;alpha-amino acid metabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0016217</classIRI>
<classLabel>N-ethylammeline chlorohydrolase activity</classLabel>
<deletedAxiom>&apos;N-ethylammeline chlorohydrolase activity&apos; SubClassOf &apos;hydrolase activity, acting on halide bonds, in C-halide compounds&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0006896</classIRI>
<classLabel>Golgi to vacuole transport</classLabel>
<newAxiom>&apos;Golgi to vacuole transport&apos; SubClassOf &apos;intercellular transport&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0006895</classIRI>
<classLabel>Golgi to endosome transport</classLabel>
<newAxiom>&apos;Golgi to endosome transport&apos; SubClassOf &apos;intercellular transport&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0016223</classIRI>
<classLabel>beta-alanine:pyruvate transaminase activity</classLabel>
<deletedAxiom>&apos;beta-alanine:pyruvate transaminase activity&apos; SubClassOf &apos;transaminase activity&apos;</deletedAxiom>
<newAxiom>&apos;beta-alanine:pyruvate transaminase activity&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140385</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0016259</classIRI>
<classLabel>selenocysteine metabolic process</classLabel>
<deletedAxiom>&apos;selenocysteine metabolic process&apos; SubClassOf &apos;alpha-amino acid metabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0016261</classIRI>
<classLabel>selenocysteine catabolic process</classLabel>
<deletedAxiom>&apos;selenocysteine catabolic process&apos; SubClassOf &apos;selenocysteine metabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0016260</classIRI>
<classLabel>L-selenocysteine biosynthetic process</classLabel>
<deletedAxiom>&apos;L-selenocysteine biosynthetic process&apos; SubClassOf &apos;selenocysteine metabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0043894</classIRI>
<classLabel>acetyl-CoA synthetase acetyltransferase activity</classLabel>
<deletedAxiom>&apos;acetyl-CoA synthetase acetyltransferase activity&apos; SubClassOf &apos;acetyltransferase activity&apos;</deletedAxiom>
<newAxiom>&apos;acetyl-CoA synthetase acetyltransferase activity&apos; SubClassOf http://purl.obolibrary.org/obo/RO_0002212 some &apos;acetate-CoA ligase activity&apos;</newAxiom>
<newAxiom>&apos;acetyl-CoA synthetase acetyltransferase activity&apos; SubClassOf &apos;protein-lysine-acetyltransferase activity&apos;</newAxiom>
<newAxiom>&apos;acetyl-CoA synthetase acetyltransferase activity&apos; SubClassOf &apos;ligase inhibitor activity&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0102641</classIRI>
<classLabel>(R)-lactaldehyde dehydrogenase activity</classLabel>
<deletedAxiom>&apos;(R)-lactaldehyde dehydrogenase activity&apos; SubClassOf &apos;oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0090123</classIRI>
<classLabel>lysosomal glycocalyx</classLabel>
<deletedAxiom>&apos;lysosomal glycocalyx&apos; EquivalentTo &apos;glycocalyx&apos; and (http://purl.obolibrary.org/obo/BFO_0000050 some &apos;lysosome&apos;)</deletedAxiom>
<deletedAxiom>&apos;lysosomal glycocalyx&apos; SubClassOf &apos;glycocalyx&apos;</deletedAxiom>
<newAxiom>&apos;lysosomal glycocalyx&apos; SubClassOf &apos;cellular anatomical structure&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0090120</classIRI>
<classLabel>lysosome to ER cholesterol transport</classLabel>
<newAxiom>&apos;lysosome to ER cholesterol transport&apos; SubClassOf &apos;intercellular transport&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_1901410</classIRI>
<classLabel>regulation of tetrapyrrole biosynthetic process from glutamate</classLabel>
<deletedAxiom>&apos;regulation of tetrapyrrole biosynthetic process from glutamate&apos; SubClassOf &apos;regulation of glutamate metabolic process&apos;</deletedAxiom>
<newAxiom>&apos;regulation of tetrapyrrole biosynthetic process from glutamate&apos; SubClassOf &apos;regulation of small molecule metabolic process&apos;</newAxiom>
<newAxiom>&apos;regulation of tetrapyrrole biosynthetic process from glutamate&apos; SubClassOf &apos;regulation of amino acid metabolic process&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_1901411</classIRI>
<classLabel>negative regulation of tetrapyrrole biosynthetic process from glutamate</classLabel>
<deletedAxiom>&apos;negative regulation of tetrapyrrole biosynthetic process from glutamate&apos; SubClassOf &apos;negative regulation of glutamate metabolic process&apos;</deletedAxiom>
<newAxiom>&apos;negative regulation of tetrapyrrole biosynthetic process from glutamate&apos; SubClassOf &apos;negative regulation of amino acid metabolic process&apos;</newAxiom>
<newAxiom>&apos;negative regulation of tetrapyrrole biosynthetic process from glutamate&apos; SubClassOf &apos;negative regulation of small molecule metabolic process&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0018811</classIRI>
<classLabel>cyclohex-1-ene-1-carboxyl-CoA hydratase activity</classLabel>
<deletedAxiom>&apos;cyclohex-1-ene-1-carboxyl-CoA hydratase activity&apos; SubClassOf &apos;hydro-lyase activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0018815</classIRI>
<classLabel>3-methyl-5-hydroxy-6-(3-carboxy-3-oxopropenyl)-1H-2-pyridon hydratase-aldolase activity</classLabel>
<deletedAxiom>&apos;3-methyl-5-hydroxy-6-(3-carboxy-3-oxopropenyl)-1H-2-pyridon hydratase-aldolase activity&apos; SubClassOf &apos;hydro-lyase activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0006868</classIRI>
<classLabel>glutamine transport</classLabel>
<deletedAxiom>&apos;glutamine transport&apos; SubClassOf &apos;nitrogen compound transport&apos;</deletedAxiom>
<deletedAxiom>&apos;glutamine transport&apos; SubClassOf &apos;carboxylic acid transport&apos;</deletedAxiom>
<newAxiom>&apos;glutamine transport&apos; SubClassOf &apos;L-amino acid transport&apos;</newAxiom>
<newAxiom>&apos;glutamine transport&apos; SubClassOf &apos;organic cation transport&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0018752</classIRI>
<classLabel>epsilon-caprolactam lactamase activity</classLabel>
<deletedAxiom>&apos;epsilon-caprolactam lactamase activity&apos; SubClassOf &apos;hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0018754</classIRI>
<classLabel>ammelide aminohydrolase activity</classLabel>
<deletedAxiom>&apos;ammelide aminohydrolase activity&apos; SubClassOf &apos;hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0018755</classIRI>
<classLabel>2-chloro-4-hydroxy-6-amino-1,3,5-triazine aminohydrolase activity</classLabel>
<deletedAxiom>&apos;2-chloro-4-hydroxy-6-amino-1,3,5-triazine aminohydrolase activity&apos; SubClassOf &apos;hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0018757</classIRI>
<classLabel>deisopropylhydroxyatrazine aminohydrolase activity</classLabel>
<deletedAxiom>&apos;deisopropylhydroxyatrazine aminohydrolase activity&apos; SubClassOf &apos;hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0018766</classIRI>
<classLabel>dihydrophloroglucinol hydrolase activity</classLabel>
<deletedAxiom>&apos;dihydrophloroglucinol hydrolase activity&apos; SubClassOf &apos;hydrolase activity, acting on carbon-carbon bonds, in ketonic substances&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0018772</classIRI>
<classLabel>trioxoheptanoate hydrolase activity</classLabel>
<deletedAxiom>&apos;trioxoheptanoate hydrolase activity&apos; SubClassOf &apos;hydrolase activity, acting on carbon-carbon bonds, in ketonic substances&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0043730</classIRI>
<classLabel>5-ureido-4-imidazole carboxylate hydrolase activity</classLabel>
<deletedAxiom>&apos;5-ureido-4-imidazole carboxylate hydrolase activity&apos; SubClassOf &apos;hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0043760</classIRI>
<classLabel>acetyldiaminopimelate aminotransferase activity</classLabel>
<deletedAxiom>&apos;acetyldiaminopimelate aminotransferase activity&apos; SubClassOf &apos;transaminase activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0043758</classIRI>
<classLabel>acetate-CoA ligase (ADP-forming) activity</classLabel>
<deletedAxiom>&apos;acetate-CoA ligase (ADP-forming) activity&apos; SubClassOf &apos;acid-thiol ligase activity&apos;</deletedAxiom>
<newAxiom>&apos;acetate-CoA ligase (ADP-forming) activity&apos; SubClassOf &apos;CoA-ligase activity&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0018711</classIRI>
<classLabel>benzoyl acetate-CoA thiolase activity</classLabel>
<deletedAxiom>&apos;benzoyl acetate-CoA thiolase activity&apos; SubClassOf &apos;acyltransferase activity, transferring groups other than amino-acyl groups&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0018712</classIRI>
<classLabel>3-hydroxybutyryl-CoA thiolase activity</classLabel>
<deletedAxiom>&apos;3-hydroxybutyryl-CoA thiolase activity&apos; SubClassOf &apos;acyltransferase activity, transferring groups other than amino-acyl groups&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0018713</classIRI>
<classLabel>3-ketopimelyl-CoA thiolase activity</classLabel>
<deletedAxiom>&apos;3-ketopimelyl-CoA thiolase activity&apos; SubClassOf &apos;acyltransferase activity, transferring groups other than amino-acyl groups&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_1901494</classIRI>
<classLabel>regulation of cysteine metabolic process</classLabel>
<deletedAxiom>&apos;regulation of cysteine metabolic process&apos; SubClassOf &apos;regulation of small molecule metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;regulation of cysteine metabolic process&apos; EquivalentTo &apos;biological regulation&apos; and (http://purl.obolibrary.org/obo/RO_0002211 some &apos;cysteine metabolic process&apos;)</deletedAxiom>
<deletedAxiom>&apos;regulation of cysteine metabolic process&apos; SubClassOf http://purl.obolibrary.org/obo/RO_0002211 some &apos;cysteine metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;regulation of cysteine metabolic process&apos; SubClassOf &apos;regulation of sulfur metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;regulation of cysteine metabolic process&apos; SubClassOf &apos;regulation of amino acid metabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0006661</classIRI>
<classLabel>phosphatidylinositol biosynthetic process</classLabel>
<deletedAxiom>&apos;phosphatidylinositol biosynthetic process&apos; SubClassOf &apos;glycerophospholipid biosynthetic process&apos;</deletedAxiom>
<newAxiom>&apos;phosphatidylinositol biosynthetic process&apos; SubClassOf &apos;biosynthetic process&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0016002</classIRI>
<classLabel>sulfite reductase activity</classLabel>
<deletedAxiom>&apos;sulfite reductase activity&apos; SubClassOf &apos;oxidoreductase activity, acting on a sulfur group of donors&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0004069</classIRI>
<classLabel>L-aspartate:2-oxoglutarate aminotransferase activity</classLabel>
<deletedAxiom>&apos;L-aspartate:2-oxoglutarate aminotransferase activity&apos; SubClassOf &apos;transaminase activity&apos;</deletedAxiom>
<newAxiom>&apos;L-aspartate:2-oxoglutarate aminotransferase activity&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140385</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0004084</classIRI>
<classLabel>branched-chain-amino-acid transaminase activity</classLabel>
<deletedAxiom>&apos;branched-chain-amino-acid transaminase activity&apos; SubClassOf &apos;transaminase activity&apos;</deletedAxiom>
<newAxiom>&apos;branched-chain-amino-acid transaminase activity&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140385</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0102465</classIRI>
<classLabel>zeaxanthin 2,2&apos;-beta-hydroxylase activity</classLabel>
<deletedAxiom>&apos;zeaxanthin 2,2&apos;-beta-hydroxylase activity&apos; SubClassOf &apos;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0102459</classIRI>
<classLabel>8-oxo-dADP diphosphate phosphatase activity</classLabel>
<deletedAxiom>&apos;8-oxo-dADP diphosphate phosphatase activity&apos; SubClassOf &apos;nucleoside diphosphate phosphatase activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0006522</classIRI>
<classLabel>alanine metabolic process</classLabel>
<deletedAxiom>&apos;alanine metabolic process&apos; SubClassOf &apos;alpha-amino acid metabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0006523</classIRI>
<classLabel>alanine biosynthetic process</classLabel>
<deletedAxiom>&apos;alanine biosynthetic process&apos; SubClassOf &apos;alanine metabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0006530</classIRI>
<classLabel>L-asparagine catabolic process</classLabel>
<deletedAxiom>&apos;L-asparagine catabolic process&apos; SubClassOf &apos;L-asparagine metabolic process&apos;</deletedAxiom>
<newAxiom>&apos;L-asparagine catabolic process&apos; SubClassOf &apos;asparagine metabolic process&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0006535</classIRI>
<classLabel>L-cysteine biosynthetic process from L-serine</classLabel>
<deletedAxiom>&apos;L-cysteine biosynthetic process from L-serine&apos; SubClassOf &apos;L-serine metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;L-cysteine biosynthetic process from L-serine&apos; SubClassOf &apos;L-cysteine biosynthetic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0006534</classIRI>
<classLabel>cysteine metabolic process</classLabel>
<deletedAxiom>&apos;cysteine metabolic process&apos; SubClassOf &apos;alpha-amino acid metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;cysteine metabolic process&apos; SubClassOf &apos;sulfur amino acid metabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0006540</classIRI>
<classLabel>gamma-aminobutyrate shunt</classLabel>
<deletedAxiom>&apos;gamma-aminobutyrate shunt&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000051 some &apos;4-aminobutyrate:2-oxoglutarate transaminase activity&apos;</deletedAxiom>
<deletedAxiom>&apos;gamma-aminobutyrate shunt&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000051 some &apos;glutamate decarboxylase activity&apos;</deletedAxiom>
<deletedAxiom>&apos;gamma-aminobutyrate shunt&apos; SubClassOf &apos;L-glutamate catabolic process&apos;</deletedAxiom>
<newAxiom>&apos;gamma-aminobutyrate shunt&apos; SubClassOf &apos;proteinogenic amino acid metabolic process&apos;</newAxiom>
<newAxiom>&apos;gamma-aminobutyrate shunt&apos; SubClassOf &apos;glutamate metabolic process&apos;</newAxiom>
<newAxiom>&apos;gamma-aminobutyrate shunt&apos; SubClassOf &apos;L-amino acid metabolic process&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0006541</classIRI>
<classLabel>glutamine metabolic process</classLabel>
<deletedAxiom>&apos;glutamine metabolic process&apos; SubClassOf &apos;carboxylic acid metabolic process&apos;</deletedAxiom>
<newAxiom>&apos;glutamine metabolic process&apos; SubClassOf &apos;L-amino acid metabolic process&apos;</newAxiom>
<newAxiom>&apos;glutamine metabolic process&apos; SubClassOf &apos;proteinogenic amino acid metabolic process&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0006548</classIRI>
<classLabel>L-histidine catabolic process</classLabel>
<deletedAxiom>&apos;L-histidine catabolic process&apos; SubClassOf &apos;L-histidine metabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0006547</classIRI>
<classLabel>L-histidine metabolic process</classLabel>
<deletedAxiom>&apos;L-histidine metabolic process&apos; SubClassOf &apos;proteinogenic amino acid metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;L-histidine metabolic process&apos; SubClassOf &apos;aromatic amino acid metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;L-histidine metabolic process&apos; SubClassOf &apos;L-amino acid metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;L-histidine metabolic process&apos; SubClassOf &apos;imidazole-containing compound metabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0031508</classIRI>
<classLabel>pericentric heterochromatin formation</classLabel>
<deletedAxiom>&apos;pericentric heterochromatin formation&apos; SubClassOf &apos;pericentric heterochromatin organization&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0018530</classIRI>
<classLabel>(R)-6-hydroxynicotine oxidase activity</classLabel>
<deletedAxiom>&apos;(R)-6-hydroxynicotine oxidase activity&apos; SubClassOf &apos;hydroxy-nicotine oxidase activity&apos;</deletedAxiom>
<newAxiom>&apos;(R)-6-hydroxynicotine oxidase activity&apos; SubClassOf &apos;oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0018531</classIRI>
<classLabel>(S)-6-hydroxynicotine oxidase activity</classLabel>
<deletedAxiom>&apos;(S)-6-hydroxynicotine oxidase activity&apos; SubClassOf &apos;hydroxy-nicotine oxidase activity&apos;</deletedAxiom>
<newAxiom>&apos;(S)-6-hydroxynicotine oxidase activity&apos; SubClassOf &apos;oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0006553</classIRI>
<classLabel>lysine metabolic process</classLabel>
<deletedAxiom>&apos;lysine metabolic process&apos; SubClassOf &apos;alpha-amino acid metabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0006555</classIRI>
<classLabel>methionine metabolic process</classLabel>
<deletedAxiom>&apos;methionine metabolic process&apos; SubClassOf &apos;alpha-amino acid metabolic process&apos;</deletedAxiom>
<newAxiom>&apos;methionine metabolic process&apos; SubClassOf &apos;L-amino acid metabolic process&apos;</newAxiom>
<newAxiom>&apos;methionine metabolic process&apos; SubClassOf &apos;proteinogenic amino acid metabolic process&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0043511</classIRI>
<classLabel>inhibin complex</classLabel>
<deletedAxiom>&apos;inhibin complex&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000050 some &apos;extracellular space&apos;</deletedAxiom>
<deletedAxiom>&apos;inhibin complex&apos; SubClassOf &apos;protein-containing complex&apos;</deletedAxiom>
<newAxiom>&apos;inhibin complex&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140392</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0043514</classIRI>
<classLabel>interleukin-12 complex</classLabel>
<deletedAxiom>&apos;interleukin-12 complex&apos; SubClassOf &apos;protein-containing complex&apos;</deletedAxiom>
<deletedAxiom>&apos;interleukin-12 complex&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000050 some &apos;extracellular space&apos;</deletedAxiom>
<newAxiom>&apos;interleukin-12 complex&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140392</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0043592</classIRI>
<classLabel>exosporium</classLabel>
<deletedAxiom>&apos;exosporium&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000050 some &apos;endospore external encapsulating structure&apos;</deletedAxiom>
<newAxiom>&apos;exosporium&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000050 some &apos;cell wall&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0102369</classIRI>
<classLabel>11alpha-30-dihydroxy beta-amyrin dehydrogenase activity</classLabel>
<deletedAxiom>&apos;11alpha-30-dihydroxy beta-amyrin dehydrogenase activity&apos; SubClassOf &apos;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0043485</classIRI>
<classLabel>endosome to pigment granule transport</classLabel>
<newAxiom>&apos;endosome to pigment granule transport&apos; SubClassOf &apos;intercellular transport&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_1901705</classIRI>
<classLabel>L-isoleucine biosynthetic process</classLabel>
<deletedAxiom>&apos;L-isoleucine biosynthetic process&apos; SubClassOf &apos;isoleucine biosynthetic process&apos;</deletedAxiom>
<newAxiom>&apos;L-isoleucine biosynthetic process&apos; SubClassOf &apos;branched-chain amino acid biosynthetic process&apos;</newAxiom>
<newAxiom>&apos;L-isoleucine biosynthetic process&apos; SubClassOf &apos;isoleucine metabolic process&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0006506</classIRI>
<classLabel>GPI anchor biosynthetic process</classLabel>
<deletedAxiom>&apos;GPI anchor biosynthetic process&apos; SubClassOf &apos;phosphatidylinositol biosynthetic process&apos;</deletedAxiom>
<newAxiom>&apos;GPI anchor biosynthetic process&apos; SubClassOf &apos;glycerophospholipid biosynthetic process&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0006505</classIRI>
<classLabel>GPI anchor metabolic process</classLabel>
<deletedAxiom>&apos;GPI anchor metabolic process&apos; SubClassOf &apos;phosphatidylinositol metabolic process&apos;</deletedAxiom>
<newAxiom>&apos;GPI anchor metabolic process&apos; SubClassOf &apos;glycerophospholipid metabolic process&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0043420</classIRI>
<classLabel>anthranilate metabolic process</classLabel>
<deletedAxiom>&apos;anthranilate metabolic process&apos; SubClassOf &apos;aromatic amino acid metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;anthranilate metabolic process&apos; SubClassOf &apos;benzene-containing compound metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;anthranilate metabolic process&apos; SubClassOf &apos;monocarboxylic acid metabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0043421</classIRI>
<classLabel>anthranilate catabolic process</classLabel>
<deletedAxiom>&apos;anthranilate catabolic process&apos; SubClassOf &apos;anthranilate metabolic process&apos;</deletedAxiom>
<newAxiom>&apos;anthranilate catabolic process&apos; SubClassOf &apos;benzene-containing compound metabolic process&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0102235</classIRI>
<classLabel>1-penten-3-one reductase activity</classLabel>
<deletedAxiom>&apos;1-penten-3-one reductase activity&apos; SubClassOf &apos;oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0043468</classIRI>
<classLabel>regulation of fucose catabolic process</classLabel>
<deletedAxiom>&apos;regulation of fucose catabolic process&apos; SubClassOf http://purl.obolibrary.org/obo/RO_0002211 some &apos;fucose catabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;regulation of fucose catabolic process&apos; EquivalentTo &apos;biological regulation&apos; and (http://purl.obolibrary.org/obo/RO_0002211 some &apos;fucose catabolic process&apos;)</deletedAxiom>
<newAxiom>&apos;regulation of fucose catabolic process&apos; EquivalentTo &apos;biological regulation&apos; and (http://purl.obolibrary.org/obo/RO_0002211 some &apos;L-fucose catabolic process&apos;)</newAxiom>
<newAxiom>&apos;regulation of fucose catabolic process&apos; SubClassOf http://purl.obolibrary.org/obo/RO_0002211 some &apos;L-fucose catabolic process&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0043464</classIRI>
<classLabel>malolactic fermentation</classLabel>
<deletedAxiom>&apos;malolactic fermentation&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000051 some &apos;malolactic enzyme activity&apos;</deletedAxiom>
<newAxiom>&apos;malolactic fermentation&apos; SubClassOf &apos;dicarboxylic acid catabolic process&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0102249</classIRI>
<classLabel>phosphatidylcholine:diacylglycerol cholinephosphotransferase activity</classLabel>
<deletedAxiom>&apos;phosphatidylcholine:diacylglycerol cholinephosphotransferase activity&apos; SubClassOf &apos;phosphotransferase activity, for other substituted phosphate groups&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0031395</classIRI>
<classLabel>bursicon neuropeptide hormone complex</classLabel>
<deletedAxiom>&apos;bursicon neuropeptide hormone complex&apos; SubClassOf &apos;protein-containing complex&apos;</deletedAxiom>
<deletedAxiom>&apos;bursicon neuropeptide hormone complex&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000050 some &apos;extracellular region&apos;</deletedAxiom>
<newAxiom>&apos;bursicon neuropeptide hormone complex&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140392</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0070981</classIRI>
<classLabel>L-asparagine biosynthetic process</classLabel>
<deletedAxiom>&apos;L-asparagine biosynthetic process&apos; SubClassOf &apos;L-asparagine metabolic process&apos;</deletedAxiom>
<newAxiom>&apos;L-asparagine biosynthetic process&apos; SubClassOf &apos;asparagine metabolic process&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0070982</classIRI>
<classLabel>L-asparagine metabolic process</classLabel>
<deletedAxiom>&apos;L-asparagine metabolic process&apos; SubClassOf &apos;L-amino acid metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;L-asparagine metabolic process&apos; SubClassOf &apos;asparagine metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;L-asparagine metabolic process&apos; SubClassOf &apos;proteinogenic amino acid metabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0102115</classIRI>
<classLabel>peptidoglycan asparagine synthase activity</classLabel>
<deletedAxiom>&apos;peptidoglycan asparagine synthase activity&apos; SubClassOf &apos;acid-ammonia (or amide) ligase activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0102134</classIRI>
<classLabel>(22S)-22-hydroxy-campesterol C-23 hydroxylase activity</classLabel>
<deletedAxiom>&apos;(22S)-22-hydroxy-campesterol C-23 hydroxylase activity&apos; SubClassOf &apos;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0102135</classIRI>
<classLabel>(22S)-22-hydroxy-campest-4-en-3-one C-23 hydroxylase activity</classLabel>
<deletedAxiom>&apos;(22S)-22-hydroxy-campest-4-en-3-one C-23 hydroxylase activity&apos; SubClassOf &apos;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0102126</classIRI>
<classLabel>coniferyl aldehyde 5-hydroxylase activity</classLabel>
<deletedAxiom>&apos;coniferyl aldehyde 5-hydroxylase activity&apos; SubClassOf &apos;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0043256</classIRI>
<classLabel>laminin trimer</classLabel>
<deletedAxiom>&apos;laminin trimer&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000050 some &apos;non-collagenous component of basement membrane&apos;</deletedAxiom>
<deletedAxiom>&apos;laminin trimer&apos; SubClassOf &apos;protein-containing complex&apos;</deletedAxiom>
<newAxiom>&apos;laminin trimer&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140392</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_1901981</classIRI>
<classLabel>phosphatidylinositol phosphate binding</classLabel>
<deletedAxiom>&apos;phosphatidylinositol phosphate binding&apos; SubClassOf &apos;phosphatidylinositol binding&apos;</deletedAxiom>
<newAxiom>&apos;phosphatidylinositol phosphate binding&apos; SubClassOf &apos;phospholipid binding&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_1901965</classIRI>
<classLabel>endoplasmic reticulum to chloroplast transport</classLabel>
<newAxiom>&apos;endoplasmic reticulum to chloroplast transport&apos; SubClassOf &apos;intercellular transport&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_1901996</classIRI>
<classLabel>regulation of indoleacetic acid biosynthetic process via tryptophan</classLabel>
<deletedAxiom>&apos;regulation of indoleacetic acid biosynthetic process via tryptophan&apos; SubClassOf &apos;regulation of L-tryptophan metabolic process&apos;</deletedAxiom>
<newAxiom>&apos;regulation of indoleacetic acid biosynthetic process via tryptophan&apos; SubClassOf &apos;regulation of amino acid metabolic process&apos;</newAxiom>
<newAxiom>&apos;regulation of indoleacetic acid biosynthetic process via tryptophan&apos; SubClassOf &apos;regulation of small molecule metabolic process&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0102038</classIRI>
<classLabel>4-nitrobenzyl alcohol oxidase activity</classLabel>
<deletedAxiom>&apos;4-nitrobenzyl alcohol oxidase activity&apos; SubClassOf &apos;oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0102037</classIRI>
<classLabel>4-nitrotoluene monooxygenase activity</classLabel>
<deletedAxiom>&apos;4-nitrotoluene monooxygenase activity&apos; SubClassOf &apos;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0008890</classIRI>
<classLabel>glycine C-acetyltransferase activity</classLabel>
<newAxiom>&apos;glycine C-acetyltransferase activity&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140379</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0102044</classIRI>
<classLabel>3-chlorobenzoate-4,5-oxygenase activity</classLabel>
<deletedAxiom>&apos;3-chlorobenzoate-4,5-oxygenase activity&apos; SubClassOf &apos;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0033853</classIRI>
<classLabel>aspartate-prephenate aminotransferase activity</classLabel>
<deletedAxiom>&apos;aspartate-prephenate aminotransferase activity&apos; SubClassOf &apos;transaminase activity&apos;</deletedAxiom>
<newAxiom>&apos;aspartate-prephenate aminotransferase activity&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140385</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0033854</classIRI>
<classLabel>glutamate-prephenate aminotransferase activity</classLabel>
<deletedAxiom>&apos;glutamate-prephenate aminotransferase activity&apos; SubClassOf &apos;transaminase activity&apos;</deletedAxiom>
<newAxiom>&apos;glutamate-prephenate aminotransferase activity&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140385</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0070743</classIRI>
<classLabel>interleukin-23 complex</classLabel>
<deletedAxiom>&apos;interleukin-23 complex&apos; SubClassOf &apos;protein-containing complex&apos;</deletedAxiom>
<deletedAxiom>&apos;interleukin-23 complex&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000050 some &apos;extracellular space&apos;</deletedAxiom>
<newAxiom>&apos;interleukin-23 complex&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140392</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0070745</classIRI>
<classLabel>interleukin-35 complex</classLabel>
<deletedAxiom>&apos;interleukin-35 complex&apos; SubClassOf &apos;protein-containing complex&apos;</deletedAxiom>
<deletedAxiom>&apos;interleukin-35 complex&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000050 some &apos;extracellular space&apos;</deletedAxiom>
<newAxiom>&apos;interleukin-35 complex&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140392</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0070744</classIRI>
<classLabel>interleukin-27 complex</classLabel>
<deletedAxiom>&apos;interleukin-27 complex&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000050 some &apos;extracellular space&apos;</deletedAxiom>
<deletedAxiom>&apos;interleukin-27 complex&apos; SubClassOf &apos;protein-containing complex&apos;</deletedAxiom>
<newAxiom>&apos;interleukin-27 complex&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140392</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0055130</classIRI>
<classLabel>D-alanine catabolic process</classLabel>
<deletedAxiom>&apos;D-alanine catabolic process&apos; SubClassOf &apos;D-alanine metabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0055107</classIRI>
<classLabel>Golgi to secretory granule transport</classLabel>
<newAxiom>&apos;Golgi to secretory granule transport&apos; SubClassOf &apos;intercellular transport&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0031161</classIRI>
<classLabel>phosphatidylinositol catabolic process</classLabel>
<deletedAxiom>&apos;phosphatidylinositol catabolic process&apos; SubClassOf &apos;glycerophospholipid catabolic process&apos;</deletedAxiom>
<newAxiom>&apos;phosphatidylinositol catabolic process&apos; SubClassOf &apos;catabolic process&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0080162</classIRI>
<classLabel>endoplasmic reticulum to cytosol auxin transport</classLabel>
<newAxiom>&apos;endoplasmic reticulum to cytosol auxin transport&apos; SubClassOf &apos;intercellular transport&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0080098</classIRI>
<classLabel>L-tyrosine-pyruvate transaminase activity</classLabel>
<deletedAxiom>&apos;L-tyrosine-pyruvate transaminase activity&apos; SubClassOf &apos;aromatic-amino-acid transaminase activity&apos;</deletedAxiom>
<newAxiom>&apos;L-tyrosine-pyruvate transaminase activity&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140385</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0080097</classIRI>
<classLabel>L-tryptophan:pyruvate aminotransferase activity</classLabel>
<deletedAxiom>&apos;L-tryptophan:pyruvate aminotransferase activity&apos; SubClassOf &apos;L-tryptophan aminotransferase activity&apos;</deletedAxiom>
<newAxiom>&apos;L-tryptophan:pyruvate aminotransferase activity&apos; SubClassOf &apos;alanine-oxo-acid transaminase activity&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0008756</classIRI>
<classLabel>o-succinylbenzoate-CoA ligase activity</classLabel>
<deletedAxiom>&apos;o-succinylbenzoate-CoA ligase activity&apos; SubClassOf &apos;acid-thiol ligase activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0008793</classIRI>
<classLabel>aromatic-amino-acid transaminase activity</classLabel>
<deletedAxiom>&apos;aromatic-amino-acid transaminase activity&apos; SubClassOf &apos;transaminase activity&apos;</deletedAxiom>
<newAxiom>&apos;aromatic-amino-acid transaminase activity&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140385</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0008791</classIRI>
<classLabel>arginine N-succinyltransferase activity</classLabel>
<newAxiom>&apos;arginine N-succinyltransferase activity&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140379</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0006149</classIRI>
<classLabel>deoxyinosine catabolic process</classLabel>
<newAxiom>&apos;deoxyinosine catabolic process&apos; SubClassOf &apos;deoxyribonucleoside catabolic process&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0006157</classIRI>
<classLabel>deoxyadenosine catabolic process</classLabel>
<newAxiom>&apos;deoxyadenosine catabolic process&apos; SubClassOf &apos;deoxyribonucleoside catabolic process&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0006161</classIRI>
<classLabel>deoxyguanosine catabolic process</classLabel>
<newAxiom>&apos;deoxyguanosine catabolic process&apos; SubClassOf &apos;deoxyribonucleoside catabolic process&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0043012</classIRI>
<classLabel>regulation of fusion of sperm to egg plasma membrane</classLabel>
<deletedAxiom>&apos;regulation of fusion of sperm to egg plasma membrane&apos; SubClassOf &apos;regulation of plasma membrane organization&apos;</deletedAxiom>
<newAxiom>&apos;regulation of fusion of sperm to egg plasma membrane&apos; SubClassOf &apos;regulation of cellular process&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0043013</classIRI>
<classLabel>negative regulation of fusion of sperm to egg plasma membrane</classLabel>
<deletedAxiom>&apos;negative regulation of fusion of sperm to egg plasma membrane&apos; SubClassOf &apos;negative regulation of cellular component organization&apos;</deletedAxiom>
<newAxiom>&apos;negative regulation of fusion of sperm to egg plasma membrane&apos; SubClassOf &apos;negative regulation of cellular process&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0031030</classIRI>
<classLabel>negative regulation of septation initiation signaling</classLabel>
<deletedAxiom>&apos;negative regulation of septation initiation signaling&apos; SubClassOf &apos;negative regulation of division septum assembly&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0031031</classIRI>
<classLabel>positive regulation of septation initiation signaling</classLabel>
<deletedAxiom>&apos;positive regulation of septation initiation signaling&apos; SubClassOf &apos;positive regulation of division septum assembly&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0055040</classIRI>
<classLabel>periplasmic flagellum</classLabel>
<newAxiom>&apos;periplasmic flagellum&apos; SubClassOf &apos;extracellular membraneless organelle&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0055043</classIRI>
<classLabel>5-oxovalerate dehydrogenase activity</classLabel>
<deletedAxiom>&apos;5-oxovalerate dehydrogenase activity&apos; SubClassOf &apos;oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0055042</classIRI>
<classLabel>5-valerolactone hydrolase activity</classLabel>
<deletedAxiom>&apos;5-valerolactone hydrolase activity&apos; SubClassOf &apos;lactonohydrolase activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0043083</classIRI>
<classLabel>synaptic cleft</classLabel>
<deletedAxiom>&apos;synaptic cleft&apos; SubClassOf &apos;extracellular region&apos;</deletedAxiom>
<newAxiom>&apos;synaptic cleft&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000050 some &apos;extracellular region&apos;</newAxiom>
<newAxiom>&apos;synaptic cleft&apos; SubClassOf &apos;cellular anatomical structure&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0033584</classIRI>
<classLabel>L-tyrosine biosynthetic process from chorismate via L-arogenate</classLabel>
<deletedAxiom>&apos;L-tyrosine biosynthetic process from chorismate via L-arogenate&apos; SubClassOf &apos;L-tyrosine biosynthetic process&apos;</deletedAxiom>
<deletedAxiom>&apos;L-tyrosine biosynthetic process from chorismate via L-arogenate&apos; SubClassOf &apos;chorismate metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;L-tyrosine biosynthetic process from chorismate via L-arogenate&apos; SubClassOf &apos;aromatic amino acid family biosynthetic process, prephenate pathway&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0033586</classIRI>
<classLabel>L-phenylalanine biosynthetic process from chorismate via L-arogenate</classLabel>
<deletedAxiom>&apos;L-phenylalanine biosynthetic process from chorismate via L-arogenate&apos; SubClassOf &apos;aromatic amino acid family biosynthetic process, prephenate pathway&apos;</deletedAxiom>
<deletedAxiom>&apos;L-phenylalanine biosynthetic process from chorismate via L-arogenate&apos; SubClassOf &apos;L-phenylalanine biosynthetic process&apos;</deletedAxiom>
<deletedAxiom>&apos;L-phenylalanine biosynthetic process from chorismate via L-arogenate&apos; SubClassOf &apos;chorismate metabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0033585</classIRI>
<classLabel>L-phenylalanine biosynthetic process from chorismate via phenylpyruvate</classLabel>
<deletedAxiom>&apos;L-phenylalanine biosynthetic process from chorismate via phenylpyruvate&apos; SubClassOf &apos;chorismate metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;L-phenylalanine biosynthetic process from chorismate via phenylpyruvate&apos; SubClassOf &apos;L-phenylalanine biosynthetic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0070548</classIRI>
<classLabel>L-glutamine aminotransferase activity</classLabel>
<deletedAxiom>&apos;L-glutamine aminotransferase activity&apos; SubClassOf &apos;transaminase activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0070529</classIRI>
<classLabel>L-tryptophan aminotransferase activity</classLabel>
<deletedAxiom>&apos;L-tryptophan aminotransferase activity&apos; SubClassOf &apos;transaminase activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0008526</classIRI>
<classLabel>phosphatidylinositol transfer activity</classLabel>
<deletedAxiom>&apos;phosphatidylinositol transfer activity&apos; SubClassOf &apos;phospholipid transfer activity&apos;</deletedAxiom>
<newAxiom>&apos;phosphatidylinositol transfer activity&apos; SubClassOf &apos;lipid transfer activity&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0008525</classIRI>
<classLabel>phosphatidylcholine transporter activity</classLabel>
<deletedAxiom>&apos;phosphatidylcholine transporter activity&apos; SubClassOf &apos;phospholipid transporter activity&apos;</deletedAxiom>
<newAxiom>&apos;phosphatidylcholine transporter activity&apos; SubClassOf &apos;intramembrane lipid transporter activity&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0033509</classIRI>
<classLabel>L-glutamate fermentation to propionate</classLabel>
<deletedAxiom>&apos;L-glutamate fermentation to propionate&apos; SubClassOf &apos;amino acid fermentation&apos;</deletedAxiom>
<deletedAxiom>&apos;L-glutamate fermentation to propionate&apos; SubClassOf &apos;L-glutamate catabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;L-glutamate fermentation to propionate&apos; SubClassOf &apos;propionate metabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0033513</classIRI>
<classLabel>L-lysine catabolic process to acetyl-CoA via 5-aminopentanamide</classLabel>
<deletedAxiom>&apos;L-lysine catabolic process to acetyl-CoA via 5-aminopentanamide&apos; SubClassOf &apos;L-lysine catabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;L-lysine catabolic process to acetyl-CoA via 5-aminopentanamide&apos; SubClassOf &apos;acetyl-CoA metabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0033512</classIRI>
<classLabel>L-lysine catabolic process to acetyl-CoA via L-saccharopine</classLabel>
<deletedAxiom>&apos;L-lysine catabolic process to acetyl-CoA via L-saccharopine&apos; SubClassOf &apos;acetyl-CoA metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;L-lysine catabolic process to acetyl-CoA via L-saccharopine&apos; SubClassOf &apos;L-lysine catabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0033514</classIRI>
<classLabel>L-lysine catabolic process to acetyl-CoA via L-pipecolate</classLabel>
<deletedAxiom>&apos;L-lysine catabolic process to acetyl-CoA via L-pipecolate&apos; SubClassOf &apos;L-lysine catabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;L-lysine catabolic process to acetyl-CoA via L-pipecolate&apos; SubClassOf &apos;acetyl-CoA metabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0045484</classIRI>
<classLabel>L-lysine 6-transaminase activity</classLabel>
<deletedAxiom>&apos;L-lysine 6-transaminase activity&apos; SubClassOf &apos;transaminase activity&apos;</deletedAxiom>
<newAxiom>&apos;L-lysine 6-transaminase activity&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140385</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0008453</classIRI>
<classLabel>alanine-glyoxylate transaminase activity</classLabel>
<deletedAxiom>&apos;alanine-glyoxylate transaminase activity&apos; SubClassOf &apos;transaminase activity&apos;</deletedAxiom>
<newAxiom>&apos;alanine-glyoxylate transaminase activity&apos; SubClassOf &apos;alanine-oxo-acid transaminase activity&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0047961</classIRI>
<classLabel>glycine N-acyltransferase activity</classLabel>
<deletedAxiom>&apos;glycine N-acyltransferase activity&apos; SubClassOf &apos;N-acyltransferase activity&apos;</deletedAxiom>
<newAxiom>&apos;glycine N-acyltransferase activity&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140379</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0047958</classIRI>
<classLabel>glycine:2-oxoglutarate aminotransferase activity</classLabel>
<deletedAxiom>&apos;glycine:2-oxoglutarate aminotransferase activity&apos; SubClassOf &apos;transaminase activity&apos;</deletedAxiom>
<newAxiom>&apos;glycine:2-oxoglutarate aminotransferase activity&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140385</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0033353</classIRI>
<classLabel>S-adenosylmethionine cycle</classLabel>
<deletedAxiom>&apos;S-adenosylmethionine cycle&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000051 some &apos;S-adenosylmethionine-homocysteine S-methyltransferase activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0045324</classIRI>
<classLabel>late endosome to vacuole transport</classLabel>
<newAxiom>&apos;late endosome to vacuole transport&apos; SubClassOf &apos;intercellular transport&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0033359</classIRI>
<classLabel>L-lysine biosynthetic process via diaminopimelate and N-succinyl-2-amino-6-ketopimelate</classLabel>
<deletedAxiom>&apos;L-lysine biosynthetic process via diaminopimelate and N-succinyl-2-amino-6-ketopimelate&apos; SubClassOf &apos;L-lysine biosynthetic process via diaminopimelate&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0033362</classIRI>
<classLabel>L-lysine biosynthetic process via diaminopimelate, diaminopimelate-aminotransferase pathway</classLabel>
<deletedAxiom>&apos;L-lysine biosynthetic process via diaminopimelate, diaminopimelate-aminotransferase pathway&apos; SubClassOf &apos;L-lysine biosynthetic process via diaminopimelate&apos;</deletedAxiom>
<deletedAxiom>&apos;L-lysine biosynthetic process via diaminopimelate, diaminopimelate-aminotransferase pathway&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000051 some &apos;diaminopimelate epimerase activity&apos;</deletedAxiom>
<deletedAxiom>&apos;L-lysine biosynthetic process via diaminopimelate, diaminopimelate-aminotransferase pathway&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000051 some &apos;L,L-diaminopimelate aminotransferase activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0033361</classIRI>
<classLabel>L-lysine biosynthetic process via diaminopimelate, dehydrogenase pathway</classLabel>
<deletedAxiom>&apos;L-lysine biosynthetic process via diaminopimelate, dehydrogenase pathway&apos; SubClassOf &apos;L-lysine biosynthetic process via diaminopimelate&apos;</deletedAxiom>
<deletedAxiom>&apos;L-lysine biosynthetic process via diaminopimelate, dehydrogenase pathway&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000051 some &apos;diaminopimelate dehydrogenase activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0033360</classIRI>
<classLabel>L-lysine biosynthetic process via diaminopimelate and L-2-acetamido-6-oxoheptanedioate</classLabel>
<deletedAxiom>&apos;L-lysine biosynthetic process via diaminopimelate and L-2-acetamido-6-oxoheptanedioate&apos; SubClassOf &apos;L-lysine biosynthetic process via diaminopimelate&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0033395</classIRI>
<classLabel>beta-alanine biosynthetic process via 3-hydroxypropionate</classLabel>
<deletedAxiom>&apos;beta-alanine biosynthetic process via 3-hydroxypropionate&apos; SubClassOf &apos;beta-alanine biosynthetic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0033394</classIRI>
<classLabel>beta-alanine biosynthetic process via 1,3 diaminopropane</classLabel>
<deletedAxiom>&apos;beta-alanine biosynthetic process via 1,3 diaminopropane&apos; SubClassOf &apos;beta-alanine biosynthetic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0033396</classIRI>
<classLabel>beta-alanine biosynthetic process via 3-ureidopropionate</classLabel>
<deletedAxiom>&apos;beta-alanine biosynthetic process via 3-ureidopropionate&apos; SubClassOf &apos;beta-alanine biosynthetic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0035901</classIRI>
<classLabel>cellular response to isolation stress</classLabel>
<deletedAxiom>&apos;cellular response to isolation stress&apos; SubClassOf &apos;cellular response to stress&apos;</deletedAxiom>
<deletedAxiom>&apos;cellular response to isolation stress&apos; SubClassOf &apos;response to isolation stress&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0035900</classIRI>
<classLabel>response to isolation stress</classLabel>
<deletedAxiom>&apos;response to isolation stress&apos; SubClassOf &apos;response to stress&apos;</deletedAxiom>
<newAxiom>&apos;response to isolation stress&apos; SubClassOf &apos;multicellular organismal response to stress&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0035927</classIRI>
<classLabel>RNA import into mitochondrion</classLabel>
<newAxiom>&apos;RNA import into mitochondrion&apos; SubClassOf &apos;intercellular transport&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0008333</classIRI>
<classLabel>endosome to lysosome transport</classLabel>
<newAxiom>&apos;endosome to lysosome transport&apos; SubClassOf &apos;intercellular transport&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0047950</classIRI>
<classLabel>glutathione oxidase activity</classLabel>
<deletedAxiom>&apos;glutathione oxidase activity&apos; SubClassOf &apos;oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor&apos;</deletedAxiom>
<newAxiom>&apos;glutathione oxidase activity&apos; SubClassOf &apos;thiol oxidase activity&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0047945</classIRI>
<classLabel>L-glutamine:pyruvate aminotransferase activity</classLabel>
<deletedAxiom>&apos;L-glutamine:pyruvate aminotransferase activity&apos; SubClassOf &apos;L-glutamine aminotransferase activity&apos;</deletedAxiom>
<newAxiom>&apos;L-glutamine:pyruvate aminotransferase activity&apos; SubClassOf &apos;alanine-oxo-acid transaminase activity&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0047946</classIRI>
<classLabel>glutamine N-acyltransferase activity</classLabel>
<deletedAxiom>&apos;glutamine N-acyltransferase activity&apos; SubClassOf &apos;N-acyltransferase activity&apos;</deletedAxiom>
<newAxiom>&apos;glutamine N-acyltransferase activity&apos; SubClassOf &apos;L-amino-acid N-acetyltransferase activity&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0047948</classIRI>
<classLabel>glutarate-CoA ligase activity</classLabel>
<deletedAxiom>&apos;glutarate-CoA ligase activity&apos; SubClassOf &apos;acid-thiol ligase activity&apos;</deletedAxiom>
<newAxiom>&apos;glutarate-CoA ligase activity&apos; SubClassOf &apos;CoA-ligase activity&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0047851</classIRI>
<classLabel>dicarboxylate-CoA ligase activity</classLabel>
<deletedAxiom>&apos;dicarboxylate-CoA ligase activity&apos; SubClassOf &apos;acid-thiol ligase activity&apos;</deletedAxiom>
<newAxiom>&apos;dicarboxylate-CoA ligase activity&apos; SubClassOf &apos;CoA-ligase activity&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0047836</classIRI>
<classLabel>D-tryptophan N-malonyltransferase activity</classLabel>
<newAxiom>&apos;D-tryptophan N-malonyltransferase activity&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140379</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0070226</classIRI>
<classLabel>sulfur:ferric ion oxidoreductase activity</classLabel>
<deletedAxiom>&apos;sulfur:ferric ion oxidoreductase activity&apos; SubClassOf &apos;oxidoreductase activity, acting on a sulfur group of donors&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0141013</classIRI>
<classLabel>purine nucleotide import into lysosome</classLabel>
<newAxiom>&apos;purine nucleotide import into lysosome&apos; SubClassOf &apos;intercellular transport&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0070251</classIRI>
<classLabel>pristanate-CoA ligase activity</classLabel>
<deletedAxiom>&apos;pristanate-CoA ligase activity&apos; SubClassOf &apos;acid-thiol ligase activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0070178</classIRI>
<classLabel>D-serine metabolic process</classLabel>
<deletedAxiom>&apos;D-serine metabolic process&apos; SubClassOf &apos;D-amino acid metabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0070179</classIRI>
<classLabel>D-serine biosynthetic process</classLabel>
<deletedAxiom>&apos;D-serine biosynthetic process&apos; SubClassOf &apos;D-serine metabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0047810</classIRI>
<classLabel>D-alanine-2-oxoglutarate aminotransferase activity</classLabel>
<deletedAxiom>&apos;D-alanine-2-oxoglutarate aminotransferase activity&apos; SubClassOf &apos;transaminase activity&apos;</deletedAxiom>
<newAxiom>&apos;D-alanine-2-oxoglutarate aminotransferase activity&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140385</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0047801</classIRI>
<classLabel>L-cysteine transaminase activity</classLabel>
<deletedAxiom>&apos;L-cysteine transaminase activity&apos; SubClassOf &apos;transaminase activity&apos;</deletedAxiom>
<newAxiom>&apos;L-cysteine transaminase activity&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140385</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0047812</classIRI>
<classLabel>D-amino-acid N-acetyltransferase activity</classLabel>
<deletedAxiom>&apos;D-amino-acid N-acetyltransferase activity&apos; SubClassOf &apos;N-acetyltransferase activity&apos;</deletedAxiom>
<newAxiom>&apos;D-amino-acid N-acetyltransferase activity&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140379</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0035751</classIRI>
<classLabel>regulation of lysosomal lumen pH</classLabel>
<deletedAxiom>&apos;regulation of lysosomal lumen pH&apos; SubClassOf &apos;regulation of intracellular pH&apos;</deletedAxiom>
<deletedAxiom>&apos;regulation of lysosomal lumen pH&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000050 some &apos;lysosome organization&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0035752</classIRI>
<classLabel>lysosomal lumen pH elevation</classLabel>
<deletedAxiom>&apos;lysosomal lumen pH elevation&apos; SubClassOf &apos;regulation of lysosomal lumen pH&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0047726</classIRI>
<classLabel>iron-cytochrome-c reductase activity</classLabel>
<deletedAxiom>&apos;iron-cytochrome-c reductase activity&apos; SubClassOf &apos;oxidoreductase activity, acting on a heme group of donors&apos;</deletedAxiom>
<newAxiom>&apos;iron-cytochrome-c reductase activity&apos; SubClassOf &apos;oxidoreductase activity, acting on metal ions&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0047747</classIRI>
<classLabel>cholate-CoA ligase activity</classLabel>
<deletedAxiom>&apos;cholate-CoA ligase activity&apos; SubClassOf &apos;acid-thiol ligase activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0047779</classIRI>
<classLabel>citrate-CoA ligase activity</classLabel>
<deletedAxiom>&apos;citrate-CoA ligase activity&apos; SubClassOf &apos;acid-thiol ligase activity&apos;</deletedAxiom>
<newAxiom>&apos;citrate-CoA ligase activity&apos; SubClassOf &apos;CoA-ligase activity&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0070062</classIRI>
<classLabel>extracellular exosome</classLabel>
<deletedAxiom>&apos;extracellular exosome&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000050 some &apos;extracellular space&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0008110</classIRI>
<classLabel>L-histidine:2-oxoglutarate aminotransferase activity</classLabel>
<deletedAxiom>&apos;L-histidine:2-oxoglutarate aminotransferase activity&apos; SubClassOf &apos;transaminase activity&apos;</deletedAxiom>
<newAxiom>&apos;L-histidine:2-oxoglutarate aminotransferase activity&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140385</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0047707</classIRI>
<classLabel>biotin-CoA ligase activity</classLabel>
<deletedAxiom>&apos;biotin-CoA ligase activity&apos; SubClassOf &apos;acid-thiol ligase activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0047612</classIRI>
<classLabel>acid-CoA ligase (GDP-forming) activity</classLabel>
<deletedAxiom>&apos;acid-CoA ligase (GDP-forming) activity&apos; SubClassOf &apos;acid-thiol ligase activity&apos;</deletedAxiom>
<newAxiom>&apos;acid-CoA ligase (GDP-forming) activity&apos; SubClassOf &apos;CoA-ligase activity&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0047635</classIRI>
<classLabel>alanine-oxo-acid transaminase activity</classLabel>
<deletedAxiom>&apos;alanine-oxo-acid transaminase activity&apos; SubClassOf &apos;transaminase activity&apos;</deletedAxiom>
<newAxiom>&apos;alanine-oxo-acid transaminase activity&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140385</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0045026</classIRI>
<classLabel>plasma membrane fusion</classLabel>
<deletedAxiom>&apos;plasma membrane fusion&apos; SubClassOf &apos;plasma membrane organization&apos;</deletedAxiom>
<deletedAxiom>&apos;plasma membrane fusion&apos; SubClassOf &apos;membrane fusion&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0045041</classIRI>
<classLabel>protein import into mitochondrial intermembrane space</classLabel>
<newAxiom>&apos;protein import into mitochondrial intermembrane space&apos; SubClassOf &apos;intercellular transport&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0070007</classIRI>
<classLabel>glutamic-type endopeptidase activity</classLabel>
<deletedAxiom>&apos;glutamic-type endopeptidase activity&apos; SubClassOf &apos;glutamic-type peptidase activity&apos;</deletedAxiom>
<deletedAxiom>&apos;glutamic-type endopeptidase activity&apos; SubClassOf &apos;endopeptidase activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0072586</classIRI>
<classLabel>DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) regulator activity</classLabel>
<deletedAxiom>&apos;DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) regulator activity&apos; SubClassOf &apos;ATPase regulator activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0047541</classIRI>
<classLabel>2-furoate-CoA ligase activity</classLabel>
<deletedAxiom>&apos;2-furoate-CoA ligase activity&apos; SubClassOf &apos;acid-thiol ligase activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0060590</classIRI>
<classLabel>ATPase regulator activity</classLabel>
<deletedAxiom>&apos;ATPase regulator activity&apos; SubClassOf http://purl.obolibrary.org/obo/RO_0002211 some &apos;ATP-dependent activity&apos;</deletedAxiom>
<deletedAxiom>&apos;ATPase regulator activity&apos; SubClassOf &apos;molecular function regulator activity&apos;</deletedAxiom>
<newAxiom>&apos;ATPase regulator activity&apos; SubClassOf &apos;nucleoside-triphosphatase regulator activity&apos;</newAxiom>
<newAxiom>&apos;ATPase regulator activity&apos; SubClassOf http://purl.obolibrary.org/obo/RO_0002211 some &apos;ATP hydrolysis activity&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0072562</classIRI>
<classLabel>blood microparticle</classLabel>
<deletedAxiom>&apos;blood microparticle&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000050 some &apos;extracellular space&apos;</deletedAxiom>
<newAxiom>&apos;blood microparticle&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000050 some &apos;extracellular region&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0047475</classIRI>
<classLabel>phenylacetate-CoA ligase activity</classLabel>
<deletedAxiom>&apos;phenylacetate-CoA ligase activity&apos; SubClassOf &apos;acid-thiol ligase activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0047476</classIRI>
<classLabel>3-alpha,7-alpha-dihydroxy-5-beta-cholestanate-CoA ligase activity</classLabel>
<deletedAxiom>&apos;3-alpha,7-alpha-dihydroxy-5-beta-cholestanate-CoA ligase activity&apos; SubClassOf &apos;acid-thiol ligase activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0047310</classIRI>
<classLabel>glutamine-scyllo-inositol transaminase activity</classLabel>
<deletedAxiom>&apos;glutamine-scyllo-inositol transaminase activity&apos; SubClassOf &apos;L-glutamine aminotransferase activity&apos;</deletedAxiom>
<newAxiom>&apos;glutamine-scyllo-inositol transaminase activity&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140385</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0047312</classIRI>
<classLabel>L-phenylalanine-pyruvate transaminase activity</classLabel>
<deletedAxiom>&apos;L-phenylalanine-pyruvate transaminase activity&apos; SubClassOf &apos;aromatic-amino-acid transaminase activity&apos;</deletedAxiom>
<newAxiom>&apos;L-phenylalanine-pyruvate transaminase activity&apos; SubClassOf &apos;alanine-oxo-acid transaminase activity&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0047313</classIRI>
<classLabel>aromatic-amino-acid-glyoxylate transaminase activity</classLabel>
<deletedAxiom>&apos;aromatic-amino-acid-glyoxylate transaminase activity&apos; SubClassOf &apos;transaminase activity&apos;</deletedAxiom>
<newAxiom>&apos;aromatic-amino-acid-glyoxylate transaminase activity&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140385</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0047316</classIRI>
<classLabel>glutamine-phenylpyruvate transaminase activity</classLabel>
<deletedAxiom>&apos;glutamine-phenylpyruvate transaminase activity&apos; SubClassOf &apos;L-glutamine aminotransferase activity&apos;</deletedAxiom>
<newAxiom>&apos;glutamine-phenylpyruvate transaminase activity&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140385</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0047306</classIRI>
<classLabel>D-methionine-pyruvate transaminase activity</classLabel>
<deletedAxiom>&apos;D-methionine-pyruvate transaminase activity&apos; SubClassOf &apos;transaminase activity&apos;</deletedAxiom>
<newAxiom>&apos;D-methionine-pyruvate transaminase activity&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140385</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0047309</classIRI>
<classLabel>dihydroxyphenylalanine transaminase activity</classLabel>
<deletedAxiom>&apos;dihydroxyphenylalanine transaminase activity&apos; SubClassOf &apos;transaminase activity&apos;</deletedAxiom>
<newAxiom>&apos;dihydroxyphenylalanine transaminase activity&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140385</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0047308</classIRI>
<classLabel>alanine-oxomalonate transaminase activity</classLabel>
<deletedAxiom>&apos;alanine-oxomalonate transaminase activity&apos; SubClassOf &apos;transaminase activity&apos;</deletedAxiom>
<newAxiom>&apos;alanine-oxomalonate transaminase activity&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140385</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0047301</classIRI>
<classLabel>valine-3-methyl-2-oxovalerate transaminase activity</classLabel>
<deletedAxiom>&apos;valine-3-methyl-2-oxovalerate transaminase activity&apos; SubClassOf &apos;transaminase activity&apos;</deletedAxiom>
<newAxiom>&apos;valine-3-methyl-2-oxovalerate transaminase activity&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140385</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0047303</classIRI>
<classLabel>glycine-oxaloacetate transaminase activity</classLabel>
<deletedAxiom>&apos;glycine-oxaloacetate transaminase activity&apos; SubClassOf &apos;transaminase activity&apos;</deletedAxiom>
<newAxiom>&apos;glycine-oxaloacetate transaminase activity&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140385</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0098927</classIRI>
<classLabel>vesicle-mediated transport between endosomal compartments</classLabel>
<newAxiom>&apos;vesicle-mediated transport between endosomal compartments&apos; SubClassOf &apos;intercellular transport&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0060304</classIRI>
<classLabel>regulation of phosphatidylinositol dephosphorylation</classLabel>
<deletedAxiom>&apos;regulation of phosphatidylinositol dephosphorylation&apos; SubClassOf &apos;regulation of phospholipid metabolic process&apos;</deletedAxiom>
<newAxiom>&apos;regulation of phosphatidylinositol dephosphorylation&apos; SubClassOf &apos;regulation of lipid metabolic process&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0047319</classIRI>
<classLabel>aspartate-phenylpyruvate transaminase activity</classLabel>
<deletedAxiom>&apos;aspartate-phenylpyruvate transaminase activity&apos; SubClassOf &apos;transaminase activity&apos;</deletedAxiom>
<newAxiom>&apos;aspartate-phenylpyruvate transaminase activity&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140385</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0035380</classIRI>
<classLabel>very long-chain-3-hydroxyacyl-CoA dehydrogenase activity</classLabel>
<deletedAxiom>&apos;very long-chain-3-hydroxyacyl-CoA dehydrogenase activity&apos; SubClassOf &apos;oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor&apos;</deletedAxiom>
<newAxiom>&apos;very long-chain-3-hydroxyacyl-CoA dehydrogenase activity&apos; SubClassOf &apos;(3S)-3-hydroxyacyl-CoA dehydrogenase (NAD+) activity&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0106162</classIRI>
<classLabel>mRNA N-acetyltransferase activity</classLabel>
<newAxiom>&apos;mRNA N-acetyltransferase activity&apos; SubClassOf &apos;catalytic activity, acting on a nucleic acid&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0047299</classIRI>
<classLabel>tryptophan-phenylpyruvate transaminase activity</classLabel>
<deletedAxiom>&apos;tryptophan-phenylpyruvate transaminase activity&apos; SubClassOf &apos;transaminase activity&apos;</deletedAxiom>
<newAxiom>&apos;tryptophan-phenylpyruvate transaminase activity&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140385</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0098887</classIRI>
<classLabel>neurotransmitter receptor transport, endosome to postsynaptic membrane</classLabel>
<newAxiom>&apos;neurotransmitter receptor transport, endosome to postsynaptic membrane&apos; SubClassOf &apos;intercellular transport&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0047297</classIRI>
<classLabel>asparagine-oxo-acid transaminase activity</classLabel>
<deletedAxiom>&apos;asparagine-oxo-acid transaminase activity&apos; SubClassOf &apos;transaminase activity&apos;</deletedAxiom>
<newAxiom>&apos;asparagine-oxo-acid transaminase activity&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140385</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0106050</classIRI>
<classLabel>tRNA 2&apos;-O-methyltransferase activity</classLabel>
<deletedAxiom>&apos;tRNA 2&apos;-O-methyltransferase activity&apos; SubClassOf &apos;tRNA methyltransferase activity&apos;</deletedAxiom>
<deletedAxiom>&apos;tRNA 2&apos;-O-methyltransferase activity&apos; SubClassOf &apos;RNA 2&apos;-O-methyltransferase activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0106045</classIRI>
<classLabel>guanine deglycation, methylglyoxal removal</classLabel>
<deletedAxiom>&apos;guanine deglycation, methylglyoxal removal&apos; SubClassOf &apos;response to methylglyoxal&apos;</deletedAxiom>
<deletedAxiom>&apos;guanine deglycation, methylglyoxal removal&apos; SubClassOf &apos;guanine deglycation&apos;</deletedAxiom>
<deletedAxiom>&apos;guanine deglycation, methylglyoxal removal&apos; SubClassOf &apos;methylglyoxal metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;guanine deglycation, methylglyoxal removal&apos; SubClassOf &apos;cellular detoxification of methylglyoxal&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0060143</classIRI>
<classLabel>positive regulation of syncytium formation by plasma membrane fusion</classLabel>
<deletedAxiom>&apos;positive regulation of syncytium formation by plasma membrane fusion&apos; SubClassOf &apos;positive regulation of developmental process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0060142</classIRI>
<classLabel>regulation of syncytium formation by plasma membrane fusion</classLabel>
<deletedAxiom>&apos;regulation of syncytium formation by plasma membrane fusion&apos; SubClassOf &apos;regulation of developmental process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_1905012</classIRI>
<classLabel>regulation of &apos;de novo&apos; NAD biosynthetic process from L-tryptophan</classLabel>
<deletedAxiom>&apos;regulation of &apos;de novo&apos; NAD biosynthetic process from L-tryptophan&apos; SubClassOf &apos;regulation of L-tryptophan metabolic process&apos;</deletedAxiom>
<newAxiom>&apos;regulation of &apos;de novo&apos; NAD biosynthetic process from L-tryptophan&apos; SubClassOf &apos;regulation of amino acid metabolic process&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_1905011</classIRI>
<classLabel>transmembrane phosphate ion transport from cytosol to vacuole</classLabel>
<newAxiom>&apos;transmembrane phosphate ion transport from cytosol to vacuole&apos; SubClassOf &apos;intercellular transport&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_1905014</classIRI>
<classLabel>positive regulation of &apos;de novo&apos; NAD biosynthetic process from L-tryptophan</classLabel>
<deletedAxiom>&apos;positive regulation of &apos;de novo&apos; NAD biosynthetic process from L-tryptophan&apos; SubClassOf &apos;positive regulation of L-tryptophan metabolic process&apos;</deletedAxiom>
<newAxiom>&apos;positive regulation of &apos;de novo&apos; NAD biosynthetic process from L-tryptophan&apos; SubClassOf &apos;positive regulation of amino acid metabolic process&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0098700</classIRI>
<classLabel>neurotransmitter loading into synaptic vesicle</classLabel>
<newAxiom>&apos;neurotransmitter loading into synaptic vesicle&apos; SubClassOf &apos;intercellular transport&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0098644</classIRI>
<classLabel>complex of collagen trimers</classLabel>
<deletedAxiom>&apos;complex of collagen trimers&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000050 some &apos;extracellular matrix&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0035091</classIRI>
<classLabel>phosphatidylinositol binding</classLabel>
<deletedAxiom>&apos;phosphatidylinositol binding&apos; SubClassOf &apos;phospholipid binding&apos;</deletedAxiom>
<newAxiom>&apos;phosphatidylinositol binding&apos; SubClassOf &apos;anion binding&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0098607</classIRI>
<classLabel>methylselenocysteine deselenhydrase activity</classLabel>
<deletedAxiom>&apos;methylselenocysteine deselenhydrase activity&apos; SubClassOf &apos;carbon-sulfur lyase activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0098642</classIRI>
<classLabel>network-forming collagen trimer</classLabel>
<newAxiom>&apos;network-forming collagen trimer&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140392</newAxiom>
<newAxiom>&apos;network-forming collagen trimer&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000050 some &apos;extracellular matrix&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0001671</classIRI>
<classLabel>ATPase activator activity</classLabel>
<deletedAxiom>&apos;ATPase activator activity&apos; SubClassOf &apos;ATPase regulator activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0098595</classIRI>
<classLabel>perivitelline space</classLabel>
<deletedAxiom>&apos;perivitelline space&apos; SubClassOf &apos;extracellular region&apos;</deletedAxiom>
<newAxiom>&apos;perivitelline space&apos; SubClassOf &apos;cellular anatomical structure&apos;</newAxiom>
<newAxiom>&apos;perivitelline space&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000050 some &apos;extracellular region&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0050362</classIRI>
<classLabel>L-tryptophan:2-oxoglutarate aminotransferase activity</classLabel>
<deletedAxiom>&apos;L-tryptophan:2-oxoglutarate aminotransferase activity&apos; SubClassOf &apos;L-tryptophan aminotransferase activity&apos;</deletedAxiom>
<newAxiom>&apos;L-tryptophan:2-oxoglutarate aminotransferase activity&apos; SubClassOf &apos;aromatic-amino-acid transaminase activity&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0015910</classIRI>
<classLabel>long-chain fatty acid import into peroxisome</classLabel>
<newAxiom>&apos;long-chain fatty acid import into peroxisome&apos; SubClassOf &apos;intercellular transport&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0050203</classIRI>
<classLabel>oxalate-CoA ligase activity</classLabel>
<deletedAxiom>&apos;oxalate-CoA ligase activity&apos; SubClassOf &apos;acid-thiol ligase activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0050281</classIRI>
<classLabel>L-serine-glyoxylate transaminase activity</classLabel>
<deletedAxiom>&apos;L-serine-glyoxylate transaminase activity&apos; SubClassOf &apos;transaminase activity&apos;</deletedAxiom>
<newAxiom>&apos;L-serine-glyoxylate transaminase activity&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140385</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_1905526</classIRI>
<classLabel>regulation of Golgi lumen acidification</classLabel>
<deletedAxiom>&apos;regulation of Golgi lumen acidification&apos; SubClassOf http://purl.obolibrary.org/obo/RO_0002211 some &apos;Golgi lumen acidification&apos;</deletedAxiom>
<deletedAxiom>&apos;regulation of Golgi lumen acidification&apos; EquivalentTo &apos;biological regulation&apos; and (http://purl.obolibrary.org/obo/RO_0002211 some &apos;Golgi lumen acidification&apos;)</deletedAxiom>
<deletedAxiom>&apos;regulation of Golgi lumen acidification&apos; SubClassOf &apos;regulation of cellular pH reduction&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_1905527</classIRI>
<classLabel>negative regulation of Golgi lumen acidification</classLabel>
<deletedAxiom>&apos;negative regulation of Golgi lumen acidification&apos; EquivalentTo &apos;biological regulation&apos; and (http://purl.obolibrary.org/obo/RO_0002212 some &apos;Golgi lumen acidification&apos;)</deletedAxiom>
<deletedAxiom>&apos;negative regulation of Golgi lumen acidification&apos; SubClassOf &apos;regulation of Golgi lumen acidification&apos;</deletedAxiom>
<deletedAxiom>&apos;negative regulation of Golgi lumen acidification&apos; SubClassOf &apos;negative regulation of cellular pH reduction&apos;</deletedAxiom>
<deletedAxiom>&apos;negative regulation of Golgi lumen acidification&apos; SubClassOf http://purl.obolibrary.org/obo/RO_0002212 some &apos;Golgi lumen acidification&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_1905528</classIRI>
<classLabel>positive regulation of Golgi lumen acidification</classLabel>
<deletedAxiom>&apos;positive regulation of Golgi lumen acidification&apos; EquivalentTo &apos;biological regulation&apos; and (http://purl.obolibrary.org/obo/RO_0002213 some &apos;Golgi lumen acidification&apos;)</deletedAxiom>
<deletedAxiom>&apos;positive regulation of Golgi lumen acidification&apos; SubClassOf http://purl.obolibrary.org/obo/RO_0002213 some &apos;Golgi lumen acidification&apos;</deletedAxiom>
<deletedAxiom>&apos;positive regulation of Golgi lumen acidification&apos; SubClassOf &apos;regulation of Golgi lumen acidification&apos;</deletedAxiom>
<deletedAxiom>&apos;positive regulation of Golgi lumen acidification&apos; SubClassOf &apos;positive regulation of cellular pH reduction&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0003987</classIRI>
<classLabel>acetate-CoA ligase activity</classLabel>
<deletedAxiom>&apos;acetate-CoA ligase activity&apos; SubClassOf &apos;acid-thiol ligase activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0052806</classIRI>
<classLabel>sulfite reductase (coenzyme F420) activity</classLabel>
<deletedAxiom>&apos;sulfite reductase (coenzyme F420) activity&apos; SubClassOf &apos;sulfite reductase activity&apos;</deletedAxiom>
<newAxiom>&apos;sulfite reductase (coenzyme F420) activity&apos; SubClassOf &apos;oxidoreductase activity, acting on a sulfur group of donors&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0052776</classIRI>
<classLabel>chitin catabolic process to fructose 6-phosphate via glucosamine</classLabel>
<deletedAxiom>&apos;chitin catabolic process to fructose 6-phosphate via glucosamine&apos; SubClassOf &apos;chitin catabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;chitin catabolic process to fructose 6-phosphate via glucosamine&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000051 some &apos;exo-1,4-beta-D-glucosaminidase activity&apos;</deletedAxiom>
<deletedAxiom>&apos;chitin catabolic process to fructose 6-phosphate via glucosamine&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000051 some &apos;N-acetylglucosamine deacetylase activity&apos;</deletedAxiom>
<deletedAxiom>&apos;chitin catabolic process to fructose 6-phosphate via glucosamine&apos; SubClassOf &apos;phosphate-containing compound metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;chitin catabolic process to fructose 6-phosphate via glucosamine&apos; SubClassOf &apos;organophosphate metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;chitin catabolic process to fructose 6-phosphate via glucosamine&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000051 some &apos;diacetylchitobiose deacetylase activity&apos;</deletedAxiom>
<deletedAxiom>&apos;chitin catabolic process to fructose 6-phosphate via glucosamine&apos; SubClassOf &apos;acetate metabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0052752</classIRI>
<classLabel>reduced coenzyme F420:heterodisulfide oxidoreductase activity</classLabel>
<deletedAxiom>&apos;reduced coenzyme F420:heterodisulfide oxidoreductase activity&apos; SubClassOf &apos;oxidoreductase activity, acting on a sulfur group of donors&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0052754</classIRI>
<classLabel>GTP:coenzyme F420 guanyltransferase activity</classLabel>
<deletedAxiom>&apos;GTP:coenzyme F420 guanyltransferase activity&apos; SubClassOf &apos;guanylyltransferase activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0050133</classIRI>
<classLabel>N6-hydroxylysine O-acetyltransferase activity</classLabel>
<newAxiom>&apos;N6-hydroxylysine O-acetyltransferase activity&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140379</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0062167</classIRI>
<classLabel>complement component C1q complex</classLabel>
<deletedAxiom>&apos;complement component C1q complex&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000050 some &apos;extracellular region&apos;</deletedAxiom>
<deletedAxiom>&apos;complement component C1q complex&apos; SubClassOf &apos;protein-containing complex&apos;</deletedAxiom>
<newAxiom>&apos;complement component C1q complex&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140392</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0050197</classIRI>
<classLabel>phytanate-CoA ligase activity</classLabel>
<deletedAxiom>&apos;phytanate-CoA ligase activity&apos; SubClassOf &apos;acid-thiol ligase activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0062155</classIRI>
<classLabel>curli secretion complex</classLabel>
<newAxiom>&apos;curli secretion complex&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140392</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0050171</classIRI>
<classLabel>phenol beta-glucosyltransferase activity</classLabel>
<deletedAxiom>&apos;phenol beta-glucosyltransferase activity&apos; SubClassOf &apos;UDP-glucosyltransferase activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0001098</classIRI>
<classLabel>basal transcription machinery binding</classLabel>
<deletedAxiom>&apos;basal transcription machinery binding&apos; SubClassOf &apos;protein binding&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0001099</classIRI>
<classLabel>basal RNA polymerase II transcription machinery binding</classLabel>
<deletedAxiom>&apos;basal RNA polymerase II transcription machinery binding&apos; SubClassOf &apos;basal transcription machinery binding&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0001096</classIRI>
<classLabel>TFIIF-class transcription factor complex binding</classLabel>
<deletedAxiom>&apos;TFIIF-class transcription factor complex binding&apos; SubClassOf &apos;protein-containing complex binding&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0001097</classIRI>
<classLabel>TFIIH-class transcription factor complex binding</classLabel>
<deletedAxiom>&apos;TFIIH-class transcription factor complex binding&apos; SubClassOf &apos;protein-containing complex binding&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0001094</classIRI>
<classLabel>TFIID-class transcription factor complex binding</classLabel>
<deletedAxiom>&apos;TFIID-class transcription factor complex binding&apos; SubClassOf &apos;protein-containing complex binding&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0001095</classIRI>
<classLabel>TFIIE-class transcription factor complex binding</classLabel>
<deletedAxiom>&apos;TFIIE-class transcription factor complex binding&apos; SubClassOf &apos;protein-containing complex binding&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0001092</classIRI>
<classLabel>TFIIA-class transcription factor complex binding</classLabel>
<deletedAxiom>&apos;TFIIA-class transcription factor complex binding&apos; SubClassOf &apos;protein-containing complex binding&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0001091</classIRI>
<classLabel>RNA polymerase II general transcription initiation factor binding</classLabel>
<deletedAxiom>&apos;RNA polymerase II general transcription initiation factor binding&apos; SubClassOf &apos;basal RNA polymerase II transcription machinery binding&apos;</deletedAxiom>
<newAxiom>&apos;RNA polymerase II general transcription initiation factor binding&apos; SubClassOf &apos;RNA polymerase II complex binding&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0052715</classIRI>
<classLabel>mannosyl-diinositol phosphorylceramide phospholipase activity</classLabel>
<deletedAxiom>&apos;mannosyl-diinositol phosphorylceramide phospholipase activity&apos; SubClassOf &apos;inositol phosphorylceramide phospholipase activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0001139</classIRI>
<classLabel>RNA polymerase II complex recruiting activity</classLabel>
<deletedAxiom>&apos;RNA polymerase II complex recruiting activity&apos; SubClassOf &apos;RNA polymerase II complex binding&apos;</deletedAxiom>
<deletedAxiom>&apos;RNA polymerase II complex recruiting activity&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000050 some &apos;RNA polymerase II preinitiation complex assembly&apos;</deletedAxiom>
<deletedAxiom>&apos;RNA polymerase II complex recruiting activity&apos; SubClassOf &apos;protein-macromolecule adaptor activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0052686</classIRI>
<classLabel>perillic acid-CoA ligase (AMP-forming) activity</classLabel>
<deletedAxiom>&apos;perillic acid-CoA ligase (AMP-forming) activity&apos; SubClassOf &apos;acid-thiol ligase activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0052688</classIRI>
<classLabel>(3R)-3-isopropenyl-6-oxoheptanoate:CoA ligase (AMP-forming) activity</classLabel>
<deletedAxiom>&apos;(3R)-3-isopropenyl-6-oxoheptanoate:CoA ligase (AMP-forming) activity&apos; SubClassOf &apos;CoA-ligase activity&apos;</deletedAxiom>
<deletedAxiom>&apos;(3R)-3-isopropenyl-6-oxoheptanoate:CoA ligase (AMP-forming) activity&apos; SubClassOf &apos;acid-thiol ligase activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0052687</classIRI>
<classLabel>(3R)-3-isopropenyl-6-oxoheptanoate:CoA ligase (ADP-forming) activity</classLabel>
<deletedAxiom>&apos;(3R)-3-isopropenyl-6-oxoheptanoate:CoA ligase (ADP-forming) activity&apos; SubClassOf &apos;CoA-ligase activity&apos;</deletedAxiom>
<deletedAxiom>&apos;(3R)-3-isopropenyl-6-oxoheptanoate:CoA ligase (ADP-forming) activity&apos; SubClassOf &apos;acid-thiol ligase activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0001108</classIRI>
<classLabel>bacterial-type RNA polymerase holo enzyme binding</classLabel>
<deletedAxiom>&apos;bacterial-type RNA polymerase holo enzyme binding&apos; SubClassOf &apos;basal transcription machinery binding&apos;</deletedAxiom>
<newAxiom>&apos;bacterial-type RNA polymerase holo enzyme binding&apos; SubClassOf &apos;RNA polymerase binding&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0050074</classIRI>
<classLabel>malate-CoA ligase activity</classLabel>
<deletedAxiom>&apos;malate-CoA ligase activity&apos; SubClassOf &apos;acid-thiol ligase activity&apos;</deletedAxiom>
<newAxiom>&apos;malate-CoA ligase activity&apos; SubClassOf &apos;CoA-ligase activity&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0062045</classIRI>
<classLabel>L-lysine alpha-aminotransferase activity</classLabel>
<deletedAxiom>&apos;L-lysine alpha-aminotransferase activity&apos; SubClassOf &apos;transaminase activity&apos;</deletedAxiom>
<newAxiom>&apos;L-lysine alpha-aminotransferase activity&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140385</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0050065</classIRI>
<classLabel>lysine-pyruvate 6-transaminase activity</classLabel>
<deletedAxiom>&apos;lysine-pyruvate 6-transaminase activity&apos; SubClassOf &apos;transaminase activity&apos;</deletedAxiom>
<newAxiom>&apos;lysine-pyruvate 6-transaminase activity&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140385</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0003712</classIRI>
<classLabel>transcription coregulator activity</classLabel>
<deletedAxiom>&apos;transcription coregulator activity&apos; SubClassOf &apos;protein-macromolecule adaptor activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0050094</classIRI>
<classLabel>methionine-glyoxylate transaminase activity</classLabel>
<deletedAxiom>&apos;methionine-glyoxylate transaminase activity&apos; SubClassOf &apos;transaminase activity&apos;</deletedAxiom>
<newAxiom>&apos;methionine-glyoxylate transaminase activity&apos; SubClassOf &apos;methionine-oxo-acid transaminase activity&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_1990570</classIRI>
<classLabel>GDP-mannose transmembrane transport</classLabel>
<newAxiom>&apos;GDP-mannose transmembrane transport&apos; SubClassOf &apos;organic anion transport&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_1990563</classIRI>
<classLabel>extracellular exosome complex</classLabel>
<deletedAxiom>&apos;extracellular exosome complex&apos; SubClassOf &apos;protein-containing complex&apos;</deletedAxiom>
<newAxiom>&apos;extracellular exosome complex&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140392</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_1990519</classIRI>
<classLabel>pyrimidine nucleotide import into mitochondrion</classLabel>
<newAxiom>&apos;pyrimidine nucleotide import into mitochondrion&apos; SubClassOf &apos;intercellular transport&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0001010</classIRI>
<classLabel>RNA polymerase II sequence-specific DNA-binding transcription factor recruiting activity</classLabel>
<deletedAxiom>&apos;RNA polymerase II sequence-specific DNA-binding transcription factor recruiting activity&apos; SubClassOf &apos;protein-macromolecule adaptor activity&apos;</deletedAxiom>
<deletedAxiom>&apos;RNA polymerase II sequence-specific DNA-binding transcription factor recruiting activity&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000051 some &apos;RNA polymerase II-specific DNA-binding transcription factor binding&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_1904562</classIRI>
<classLabel>phosphatidylinositol 5-phosphate metabolic process</classLabel>
<deletedAxiom>&apos;phosphatidylinositol 5-phosphate metabolic process&apos; SubClassOf &apos;phosphatidylinositol metabolic process&apos;</deletedAxiom>
<newAxiom>&apos;phosphatidylinositol 5-phosphate metabolic process&apos; SubClassOf &apos;glycerophospholipid metabolic process&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_1990616</classIRI>
<classLabel>magnesium ion export from mitochondrion</classLabel>
<newAxiom>&apos;magnesium ion export from mitochondrion&apos; SubClassOf &apos;intercellular transport&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_1902005</classIRI>
<classLabel>regulation of L-proline biosynthetic process</classLabel>
<deletedAxiom>&apos;regulation of L-proline biosynthetic process&apos; SubClassOf &apos;regulation of L-proline metabolic process&apos;</deletedAxiom>
<newAxiom>&apos;regulation of L-proline biosynthetic process&apos; SubClassOf &apos;regulation of small molecule metabolic process&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_1902079</classIRI>
<classLabel>D-valine catabolic process</classLabel>
<deletedAxiom>&apos;D-valine catabolic process&apos; SubClassOf &apos;D-amino acid catabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;D-valine catabolic process&apos; SubClassOf &apos;D-valine metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;D-valine catabolic process&apos; SubClassOf &apos;branched-chain amino acid catabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_1902114</classIRI>
<classLabel>D-valine metabolic process</classLabel>
<deletedAxiom>&apos;D-valine metabolic process&apos; SubClassOf &apos;valine metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;D-valine metabolic process&apos; SubClassOf &apos;D-amino acid metabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_1990883</classIRI>
<classLabel>18S rRNA cytidine N-acetyltransferase activity</classLabel>
<newAxiom>&apos;18S rRNA cytidine N-acetyltransferase activity&apos; SubClassOf &apos;catalytic activity, acting on a rRNA&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_2001196</classIRI>
<classLabel>positive regulation of lysine biosynthetic process via alpha-aminoadipate and saccharopine</classLabel>
<deletedAxiom>&apos;positive regulation of lysine biosynthetic process via alpha-aminoadipate and saccharopine&apos; EquivalentTo &apos;biological regulation&apos; and (http://purl.obolibrary.org/obo/RO_0002213 some &apos;L-lysine biosynthetic process via alpha-aminoadipate and saccharopine&apos;)</deletedAxiom>
<deletedAxiom>&apos;positive regulation of lysine biosynthetic process via alpha-aminoadipate and saccharopine&apos; SubClassOf http://purl.obolibrary.org/obo/RO_0002213 some &apos;L-lysine biosynthetic process via alpha-aminoadipate and saccharopine&apos;</deletedAxiom>
<deletedAxiom>&apos;positive regulation of lysine biosynthetic process via alpha-aminoadipate and saccharopine&apos; SubClassOf &apos;regulation of lysine biosynthetic process via alpha-aminoadipate and saccharopine&apos;</deletedAxiom>
<newAxiom>&apos;positive regulation of lysine biosynthetic process via alpha-aminoadipate and saccharopine&apos; SubClassOf http://purl.obolibrary.org/obo/RO_0002213 some &apos;L-lysine biosynthetic process&apos;</newAxiom>
<newAxiom>&apos;positive regulation of lysine biosynthetic process via alpha-aminoadipate and saccharopine&apos; EquivalentTo &apos;biological regulation&apos; and (http://purl.obolibrary.org/obo/RO_0002213 some &apos;L-lysine biosynthetic process&apos;)</newAxiom>
<newAxiom>&apos;positive regulation of lysine biosynthetic process via alpha-aminoadipate and saccharopine&apos; SubClassOf &apos;regulation of lysine biosynthetic process via aminoadipic acid&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_2001195</classIRI>
<classLabel>negative regulation of lysine biosynthetic process via alpha-aminoadipate and saccharopine</classLabel>
<deletedAxiom>&apos;negative regulation of lysine biosynthetic process via alpha-aminoadipate and saccharopine&apos; SubClassOf http://purl.obolibrary.org/obo/RO_0002212 some &apos;L-lysine biosynthetic process via alpha-aminoadipate and saccharopine&apos;</deletedAxiom>
<deletedAxiom>&apos;negative regulation of lysine biosynthetic process via alpha-aminoadipate and saccharopine&apos; EquivalentTo &apos;biological regulation&apos; and (http://purl.obolibrary.org/obo/RO_0002212 some &apos;L-lysine biosynthetic process via alpha-aminoadipate and saccharopine&apos;)</deletedAxiom>
<deletedAxiom>&apos;negative regulation of lysine biosynthetic process via alpha-aminoadipate and saccharopine&apos; SubClassOf &apos;negative regulation of lysine biosynthetic process via aminoadipic acid&apos;</deletedAxiom>
<deletedAxiom>&apos;negative regulation of lysine biosynthetic process via alpha-aminoadipate and saccharopine&apos; SubClassOf &apos;regulation of lysine biosynthetic process via alpha-aminoadipate and saccharopine&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_2001194</classIRI>
<classLabel>regulation of lysine biosynthetic process via alpha-aminoadipate and saccharopine</classLabel>
<deletedAxiom>&apos;regulation of lysine biosynthetic process via alpha-aminoadipate and saccharopine&apos; SubClassOf &apos;regulation of lysine biosynthetic process via aminoadipic acid&apos;</deletedAxiom>
<deletedAxiom>&apos;regulation of lysine biosynthetic process via alpha-aminoadipate and saccharopine&apos; SubClassOf http://purl.obolibrary.org/obo/RO_0002211 some &apos;L-lysine biosynthetic process via alpha-aminoadipate and saccharopine&apos;</deletedAxiom>
<deletedAxiom>&apos;regulation of lysine biosynthetic process via alpha-aminoadipate and saccharopine&apos; EquivalentTo &apos;biological regulation&apos; and (http://purl.obolibrary.org/obo/RO_0002211 some &apos;L-lysine biosynthetic process via alpha-aminoadipate and saccharopine&apos;)</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_1904962</classIRI>
<classLabel>plastid to vacuole vesicle-mediated transport</classLabel>
<newAxiom>&apos;plastid to vacuole vesicle-mediated transport&apos; SubClassOf &apos;intercellular transport&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_1904947</classIRI>
<classLabel>folate import into mitochondrion</classLabel>
<newAxiom>&apos;folate import into mitochondrion&apos; SubClassOf &apos;intercellular transport&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_2001156</classIRI>
<classLabel>regulation of L-proline catabolic process</classLabel>
<deletedAxiom>&apos;regulation of L-proline catabolic process&apos; SubClassOf &apos;regulation of L-proline metabolic process&apos;</deletedAxiom>
<newAxiom>&apos;regulation of L-proline catabolic process&apos; SubClassOf &apos;regulation of amino acid metabolic process&apos;</newAxiom>
<newAxiom>&apos;regulation of L-proline catabolic process&apos; SubClassOf &apos;regulation of small molecule metabolic process&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0042838</classIRI>
<classLabel>D-glucarate catabolic process</classLabel>
<deletedAxiom>&apos;D-glucarate catabolic process&apos; SubClassOf &apos;glucarate catabolic process&apos;</deletedAxiom>
<newAxiom>&apos;D-glucarate catabolic process&apos; SubClassOf &apos;aldaric acid catabolic process&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0015247</classIRI>
<classLabel>aminophospholipid flippase activity</classLabel>
<deletedAxiom>&apos;aminophospholipid flippase activity&apos; SubClassOf &apos;phospholipid transporter activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0042853</classIRI>
<classLabel>L-alanine catabolic process</classLabel>
<deletedAxiom>&apos;L-alanine catabolic process&apos; SubClassOf &apos;L-alanine metabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0042852</classIRI>
<classLabel>L-alanine biosynthetic process</classLabel>
<deletedAxiom>&apos;L-alanine biosynthetic process&apos; SubClassOf &apos;L-alanine metabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0042851</classIRI>
<classLabel>L-alanine metabolic process</classLabel>
<deletedAxiom>&apos;L-alanine metabolic process&apos; SubClassOf &apos;alanine metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;L-alanine metabolic process&apos; SubClassOf &apos;proteinogenic amino acid metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;L-alanine metabolic process&apos; SubClassOf &apos;L-amino acid metabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0042881</classIRI>
<classLabel>D-galactonate transmembrane transporter activity</classLabel>
<deletedAxiom>&apos;D-galactonate transmembrane transporter activity&apos; SubClassOf &apos;monocarboxylic acid transmembrane transporter activity&apos;</deletedAxiom>
<deletedAxiom>&apos;D-galactonate transmembrane transporter activity&apos; SubClassOf &apos;carbohydrate transmembrane transporter activity&apos;</deletedAxiom>
<newAxiom>&apos;D-galactonate transmembrane transporter activity&apos; SubClassOf &apos;carbohydrate:proton symporter activity&apos;</newAxiom>
<newAxiom>&apos;D-galactonate transmembrane transporter activity&apos; SubClassOf &apos;secondary active monocarboxylate transmembrane transporter activity&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0030729</classIRI>
<classLabel>acetoacetate-CoA ligase activity</classLabel>
<deletedAxiom>&apos;acetoacetate-CoA ligase activity&apos; SubClassOf &apos;acid-thiol ligase activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_1902334</classIRI>
<classLabel>fructose export from vacuole to cytoplasm</classLabel>
<newAxiom>&apos;fructose export from vacuole to cytoplasm&apos; SubClassOf &apos;intercellular transport&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_1990943</classIRI>
<classLabel>mating type region replication fork barrier binding</classLabel>
<deletedAxiom>&apos;mating type region replication fork barrier binding&apos; SubClassOf &apos;replication fork barrier binding&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_1990972</classIRI>
<classLabel>multimerin complex</classLabel>
<newAxiom>&apos;multimerin complex&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140392</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_1990971</classIRI>
<classLabel>EMILIN complex</classLabel>
<newAxiom>&apos;EMILIN complex&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140392</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0052150</classIRI>
<classLabel>symbiont-mediated perturbation of host apoptosis</classLabel>
<deletedAxiom>&apos;symbiont-mediated perturbation of host apoptosis&apos; SubClassOf &apos;regulation of killing of cells of another organism&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_1990911</classIRI>
<classLabel>response to psychosocial stress</classLabel>
<deletedAxiom>&apos;response to psychosocial stress&apos; SubClassOf &apos;response to stress&apos;</deletedAxiom>
<newAxiom>&apos;response to psychosocial stress&apos; SubClassOf &apos;multicellular organismal response to stress&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0030632</classIRI>
<classLabel>D-alanine biosynthetic process</classLabel>
<deletedAxiom>&apos;D-alanine biosynthetic process&apos; SubClassOf &apos;D-alanine metabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0030641</classIRI>
<classLabel>regulation of cellular pH</classLabel>
<deletedAxiom>&apos;regulation of cellular pH&apos; SubClassOf &apos;intracellular monoatomic cation homeostasis&apos;</deletedAxiom>
<deletedAxiom>&apos;regulation of cellular pH&apos; SubClassOf &apos;regulation of pH&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_1902634</classIRI>
<classLabel>1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process</classLabel>
<deletedAxiom>&apos;1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process&apos; SubClassOf &apos;phosphatidylinositol catabolic process&apos;</deletedAxiom>
<newAxiom>&apos;1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process&apos; SubClassOf &apos;glycerophospholipid catabolic process&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_1902633</classIRI>
<classLabel>1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate metabolic process</classLabel>
<deletedAxiom>&apos;1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate metabolic process&apos; SubClassOf &apos;phosphatidylinositol metabolic process&apos;</deletedAxiom>
<newAxiom>&apos;1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate metabolic process&apos; SubClassOf &apos;glycerophospholipid metabolic process&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0005601</classIRI>
<classLabel>classical-complement-pathway C3/C5 convertase complex</classLabel>
<deletedAxiom>&apos;classical-complement-pathway C3/C5 convertase complex&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000050 some &apos;extracellular space&apos;</deletedAxiom>
<newAxiom>&apos;classical-complement-pathway C3/C5 convertase complex&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140392</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0005602</classIRI>
<classLabel>complement component C1 complex</classLabel>
<deletedAxiom>&apos;complement component C1 complex&apos; SubClassOf &apos;protein-containing complex&apos;</deletedAxiom>
<deletedAxiom>&apos;complement component C1 complex&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000050 some &apos;extracellular region&apos;</deletedAxiom>
<newAxiom>&apos;complement component C1 complex&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140392</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0005615</classIRI>
<classLabel>extracellular space</classLabel>
<deletedAxiom>&apos;extracellular space&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000050 some &apos;extracellular region&apos;</deletedAxiom>
<deletedAxiom>&apos;extracellular space&apos; SubClassOf &apos;cellular anatomical structure&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0005616</classIRI>
<classLabel>larval serum protein complex</classLabel>
<deletedAxiom>&apos;larval serum protein complex&apos; SubClassOf &apos;protein-containing complex&apos;</deletedAxiom>
<deletedAxiom>&apos;larval serum protein complex&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000050 some &apos;extracellular space&apos;</deletedAxiom>
<newAxiom>&apos;larval serum protein complex&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140392</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_2001297</classIRI>
<classLabel>N(omega)-methyl-L-arginine catabolic process</classLabel>
<deletedAxiom>&apos;N(omega)-methyl-L-arginine catabolic process&apos; SubClassOf &apos;L-amino acid catabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;N(omega)-methyl-L-arginine catabolic process&apos; SubClassOf &apos;modified amino acid catabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;N(omega)-methyl-L-arginine catabolic process&apos; SubClassOf &apos;non-proteinogenic amino acid catabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_2001299</classIRI>
<classLabel>N(omega),N(omega)-dimethyl-L-arginine catabolic process</classLabel>
<deletedAxiom>&apos;N(omega),N(omega)-dimethyl-L-arginine catabolic process&apos; SubClassOf &apos;non-proteinogenic amino acid catabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;N(omega),N(omega)-dimethyl-L-arginine catabolic process&apos; SubClassOf &apos;modified amino acid catabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;N(omega),N(omega)-dimethyl-L-arginine catabolic process&apos; SubClassOf &apos;L-amino acid catabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_1902647</classIRI>
<classLabel>negative regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthetic process</classLabel>
<deletedAxiom>&apos;negative regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthetic process&apos; SubClassOf &apos;negative regulation of phosphatidylinositol biosynthetic process&apos;</deletedAxiom>
<newAxiom>&apos;negative regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthetic process&apos; SubClassOf &apos;negative regulation of phospholipid biosynthetic process&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_1902646</classIRI>
<classLabel>regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthetic process</classLabel>
<deletedAxiom>&apos;regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthetic process&apos; SubClassOf &apos;regulation of phosphatidylinositol biosynthetic process&apos;</deletedAxiom>
<newAxiom>&apos;regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthetic process&apos; SubClassOf &apos;regulation of phospholipid biosynthetic process&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_1902648</classIRI>
<classLabel>positive regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthetic process</classLabel>
<deletedAxiom>&apos;positive regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthetic process&apos; SubClassOf &apos;positive regulation of phosphatidylinositol biosynthetic process&apos;</deletedAxiom>
<newAxiom>&apos;positive regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthetic process&apos; SubClassOf &apos;positive regulation of phospholipid biosynthetic process&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0005540</classIRI>
<classLabel>hyaluronic acid binding</classLabel>
<deletedAxiom>&apos;hyaluronic acid binding&apos; SubClassOf &apos;glycosaminoglycan binding&apos;</deletedAxiom>
<newAxiom>&apos;hyaluronic acid binding&apos; SubClassOf &apos;carboxylic acid binding&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0005545</classIRI>
<classLabel>1-phosphatidylinositol binding</classLabel>
<deletedAxiom>&apos;1-phosphatidylinositol binding&apos; SubClassOf &apos;phosphatidylinositol binding&apos;</deletedAxiom>
<newAxiom>&apos;1-phosphatidylinositol binding&apos; SubClassOf &apos;phospholipid binding&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0005548</classIRI>
<classLabel>phospholipid transporter activity</classLabel>
<deletedAxiom>&apos;phospholipid transporter activity&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000050 some &apos;phospholipid transport&apos;</deletedAxiom>
<deletedAxiom>&apos;phospholipid transporter activity&apos; SubClassOf &apos;lipid transporter activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_2001249</classIRI>
<classLabel>negative regulation of ammonia assimilation cycle</classLabel>
<deletedAxiom>&apos;negative regulation of ammonia assimilation cycle&apos; SubClassOf &apos;negative regulation of glutamate metabolic process&apos;</deletedAxiom>
<newAxiom>&apos;negative regulation of ammonia assimilation cycle&apos; SubClassOf &apos;negative regulation of small molecule metabolic process&apos;</newAxiom>
<newAxiom>&apos;negative regulation of ammonia assimilation cycle&apos; SubClassOf &apos;negative regulation of amino acid metabolic process&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_2001248</classIRI>
<classLabel>regulation of ammonia assimilation cycle</classLabel>
<deletedAxiom>&apos;regulation of ammonia assimilation cycle&apos; SubClassOf &apos;regulation of glutamate metabolic process&apos;</deletedAxiom>
<newAxiom>&apos;regulation of ammonia assimilation cycle&apos; SubClassOf &apos;regulation of small molecule metabolic process&apos;</newAxiom>
<newAxiom>&apos;regulation of ammonia assimilation cycle&apos; SubClassOf &apos;regulation of amino acid metabolic process&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0005577</classIRI>
<classLabel>fibrinogen complex</classLabel>
<deletedAxiom>&apos;fibrinogen complex&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000050 some &apos;extracellular space&apos;</deletedAxiom>
<deletedAxiom>&apos;fibrinogen complex&apos; SubClassOf &apos;protein-containing complex&apos;</deletedAxiom>
<newAxiom>&apos;fibrinogen complex&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140392</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0005583</classIRI>
<classLabel>fibrillar collagen trimer</classLabel>
<newAxiom>&apos;fibrillar collagen trimer&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140392</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0005589</classIRI>
<classLabel>collagen type VI trimer</classLabel>
<newAxiom>&apos;collagen type VI trimer&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140392</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0005590</classIRI>
<classLabel>collagen type VII trimer</classLabel>
<newAxiom>&apos;collagen type VII trimer&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140392</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0005591</classIRI>
<classLabel>collagen type VIII trimer</classLabel>
<deletedAxiom>&apos;collagen type VIII trimer&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000050 some &apos;hexagonal collagen network of basement membrane&apos;</deletedAxiom>
<newAxiom>&apos;collagen type VIII trimer&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000050 some &apos;interstitial hexagonal collagen network&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0005593</classIRI>
<classLabel>FACIT collagen trimer</classLabel>
<newAxiom>&apos;FACIT collagen trimer&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140392</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0042571</classIRI>
<classLabel>immunoglobulin complex, circulating</classLabel>
<deletedAxiom>&apos;immunoglobulin complex, circulating&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000050 some &apos;extracellular space&apos;</deletedAxiom>
<newAxiom>&apos;immunoglobulin complex, circulating&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140392</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0042597</classIRI>
<classLabel>periplasmic space</classLabel>
<newAxiom>&apos;periplasmic space&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000050 some &apos;extracellular region&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0140916</classIRI>
<classLabel>zinc ion import into lysosome</classLabel>
<newAxiom>&apos;zinc ion import into lysosome&apos; SubClassOf &apos;intercellular transport&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0140914</classIRI>
<classLabel>zinc ion import into secretory vesicle</classLabel>
<newAxiom>&apos;zinc ion import into secretory vesicle&apos; SubClassOf &apos;intercellular transport&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0140917</classIRI>
<classLabel>zinc ion import into mitochondrion</classLabel>
<newAxiom>&apos;zinc ion import into mitochondrion&apos; SubClassOf &apos;intercellular transport&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_1902756</classIRI>
<classLabel>sulfurated eukaryotic molybdenum cofactor(2-) biosynthetic process</classLabel>
<deletedAxiom>&apos;sulfurated eukaryotic molybdenum cofactor(2-) biosynthetic process&apos; SubClassOf &apos;biosynthetic process&apos;</deletedAxiom>
<deletedAxiom>&apos;sulfurated eukaryotic molybdenum cofactor(2-) biosynthetic process&apos; SubClassOf &apos;phosphorus metabolic process&apos;</deletedAxiom>
<newAxiom>&apos;sulfurated eukaryotic molybdenum cofactor(2-) biosynthetic process&apos; SubClassOf &apos;Mo-molybdopterin cofactor biosynthetic process&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_1902760</classIRI>
<classLabel>Mo(VI)-molybdopterin cytosine dinucleotide biosynthetic process</classLabel>
<newAxiom>&apos;Mo(VI)-molybdopterin cytosine dinucleotide biosynthetic process&apos; SubClassOf &apos;nucleotide biosynthetic process&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_1902774</classIRI>
<classLabel>late endosome to lysosome transport</classLabel>
<newAxiom>&apos;late endosome to lysosome transport&apos; SubClassOf &apos;intercellular transport&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0030419</classIRI>
<classLabel>nicotianamine catabolic process</classLabel>
<deletedAxiom>&apos;nicotianamine catabolic process&apos; SubClassOf &apos;biogenic amine catabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;nicotianamine catabolic process&apos; SubClassOf &apos;amino acid catabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;nicotianamine catabolic process&apos; SubClassOf &apos;tricarboxylic acid catabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0005484</classIRI>
<classLabel>SNAP receptor activity</classLabel>
<newAxiom>&apos;SNAP receptor activity&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000050 some &apos;fusogenic activity&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0042410</classIRI>
<classLabel>6-carboxyhexanoate-CoA ligase activity</classLabel>
<deletedAxiom>&apos;6-carboxyhexanoate-CoA ligase activity&apos; SubClassOf &apos;acid-thiol ligase activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0042452</classIRI>
<classLabel>deoxyguanosine biosynthetic process</classLabel>
<newAxiom>&apos;deoxyguanosine biosynthetic process&apos; SubClassOf &apos;deoxyribonucleoside biosynthetic process&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0042450</classIRI>
<classLabel>L-arginine biosynthetic process via ornithine</classLabel>
<deletedAxiom>&apos;L-arginine biosynthetic process via ornithine&apos; SubClassOf &apos;L-arginine biosynthetic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0140820</classIRI>
<classLabel>cytosol to Golgi apparatus transport</classLabel>
<newAxiom>&apos;cytosol to Golgi apparatus transport&apos; SubClassOf &apos;intercellular transport&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0005319</classIRI>
<classLabel>lipid transporter activity</classLabel>
<deletedAxiom>&apos;lipid transporter activity&apos; SubClassOf &apos;transporter activity&apos;</deletedAxiom>
<deletedAxiom>&apos;lipid transporter activity&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000050 some &apos;lipid transport&apos;</deletedAxiom>
<newAxiom>&apos;lipid transporter activity&apos; SubClassOf &apos;molecular carrier activity&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0032974</classIRI>
<classLabel>amino acid transmembrane export from vacuole</classLabel>
<newAxiom>&apos;amino acid transmembrane export from vacuole&apos; SubClassOf &apos;intercellular transport&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0030312</classIRI>
<classLabel>external encapsulating structure</classLabel>
<deletedAxiom>&apos;external encapsulating structure&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000050 some &apos;cell periphery&apos;</deletedAxiom>
<newAxiom>&apos;external encapsulating structure&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000050 some &apos;extracellular region&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0032975</classIRI>
<classLabel>amino acid transmembrane import into vacuole</classLabel>
<newAxiom>&apos;amino acid transmembrane import into vacuole&apos; SubClassOf &apos;intercellular transport&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0042355</classIRI>
<classLabel>L-fucose catabolic process</classLabel>
<deletedAxiom>&apos;L-fucose catabolic process&apos; SubClassOf &apos;fucose catabolic process&apos;</deletedAxiom>
<newAxiom>&apos;L-fucose catabolic process&apos; SubClassOf &apos;hexose catabolic process&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_1902955</classIRI>
<classLabel>positive regulation of early endosome to recycling endosome transport</classLabel>
<deletedAxiom>&apos;positive regulation of early endosome to recycling endosome transport&apos; SubClassOf &apos;positive regulation of intracellular transport&apos;</deletedAxiom>
<deletedAxiom>&apos;positive regulation of early endosome to recycling endosome transport&apos; EquivalentTo &apos;biological regulation&apos; and (http://purl.obolibrary.org/obo/RO_0002213 some &apos;early endosome to recycling endosome transport&apos;)</deletedAxiom>
<deletedAxiom>&apos;positive regulation of early endosome to recycling endosome transport&apos; SubClassOf http://purl.obolibrary.org/obo/RO_0002213 some &apos;early endosome to recycling endosome transport&apos;</deletedAxiom>
<deletedAxiom>&apos;positive regulation of early endosome to recycling endosome transport&apos; SubClassOf &apos;regulation of early endosome to recycling endosome transport&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_1902954</classIRI>
<classLabel>regulation of early endosome to recycling endosome transport</classLabel>
<deletedAxiom>&apos;regulation of early endosome to recycling endosome transport&apos; EquivalentTo &apos;biological regulation&apos; and (http://purl.obolibrary.org/obo/RO_0002211 some &apos;early endosome to recycling endosome transport&apos;)</deletedAxiom>
<deletedAxiom>&apos;regulation of early endosome to recycling endosome transport&apos; SubClassOf &apos;regulation of vesicle-mediated transport&apos;</deletedAxiom>
<deletedAxiom>&apos;regulation of early endosome to recycling endosome transport&apos; SubClassOf http://purl.obolibrary.org/obo/RO_0002211 some &apos;early endosome to recycling endosome transport&apos;</deletedAxiom>
<deletedAxiom>&apos;regulation of early endosome to recycling endosome transport&apos; SubClassOf &apos;regulation of intracellular transport&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_1902986</classIRI>
<classLabel>regulation of lysine biosynthetic process via aminoadipic acid</classLabel>
<deletedAxiom>&apos;regulation of lysine biosynthetic process via aminoadipic acid&apos; EquivalentTo &apos;biological regulation&apos; and (http://purl.obolibrary.org/obo/RO_0002211 some &apos;L-lysine biosynthetic process via aminoadipic acid&apos;)</deletedAxiom>
<deletedAxiom>&apos;regulation of lysine biosynthetic process via aminoadipic acid&apos; SubClassOf http://purl.obolibrary.org/obo/RO_0002211 some &apos;L-lysine biosynthetic process via aminoadipic acid&apos;</deletedAxiom>
<newAxiom>&apos;regulation of lysine biosynthetic process via aminoadipic acid&apos; SubClassOf http://purl.obolibrary.org/obo/RO_0002211 some &apos;L-lysine biosynthetic process&apos;</newAxiom>
<newAxiom>&apos;regulation of lysine biosynthetic process via aminoadipic acid&apos; EquivalentTo &apos;biological regulation&apos; and (http://purl.obolibrary.org/obo/RO_0002211 some &apos;L-lysine biosynthetic process&apos;)</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_1902987</classIRI>
<classLabel>negative regulation of lysine biosynthetic process via aminoadipic acid</classLabel>
<deletedAxiom>&apos;negative regulation of lysine biosynthetic process via aminoadipic acid&apos; SubClassOf &apos;negative regulation of amino acid biosynthetic process&apos;</deletedAxiom>
<deletedAxiom>&apos;negative regulation of lysine biosynthetic process via aminoadipic acid&apos; EquivalentTo &apos;biological regulation&apos; and (http://purl.obolibrary.org/obo/RO_0002212 some &apos;L-lysine biosynthetic process via aminoadipic acid&apos;)</deletedAxiom>
<deletedAxiom>&apos;negative regulation of lysine biosynthetic process via aminoadipic acid&apos; SubClassOf &apos;negative regulation of small molecule metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;negative regulation of lysine biosynthetic process via aminoadipic acid&apos; SubClassOf http://purl.obolibrary.org/obo/RO_0002212 some &apos;L-lysine biosynthetic process via aminoadipic acid&apos;</deletedAxiom>
<deletedAxiom>&apos;negative regulation of lysine biosynthetic process via aminoadipic acid&apos; SubClassOf &apos;regulation of lysine biosynthetic process via aminoadipic acid&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0044813</classIRI>
<classLabel>pyruvate fermentation via PFOR</classLabel>
<deletedAxiom>&apos;pyruvate fermentation via PFOR&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000051 some &apos;pyruvate synthase activity&apos;</deletedAxiom>
<deletedAxiom>&apos;pyruvate fermentation via PFOR&apos; EquivalentTo &apos;pyruvate fermentation&apos; and (http://purl.obolibrary.org/obo/BFO_0000051 some &apos;pyruvate synthase activity&apos;)</deletedAxiom>
<newAxiom>&apos;pyruvate fermentation via PFOR&apos; SubClassOf &apos;butyrate metabolic process&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0044814</classIRI>
<classLabel>pyruvate fermentation via PFL</classLabel>
<deletedAxiom>&apos;pyruvate fermentation via PFL&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000051 some &apos;formate C-acetyltransferase activity&apos;</deletedAxiom>
<deletedAxiom>&apos;pyruvate fermentation via PFL&apos; EquivalentTo &apos;pyruvate fermentation&apos; and (http://purl.obolibrary.org/obo/BFO_0000051 some &apos;formate C-acetyltransferase activity&apos;)</deletedAxiom>
<deletedAxiom>&apos;pyruvate fermentation via PFL&apos; SubClassOf &apos;pyruvate fermentation&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0019877</classIRI>
<classLabel>diaminopimelate biosynthetic process</classLabel>
<deletedAxiom>&apos;diaminopimelate biosynthetic process&apos; SubClassOf &apos;dicarboxylic acid biosynthetic process&apos;</deletedAxiom>
<deletedAxiom>&apos;diaminopimelate biosynthetic process&apos; SubClassOf &apos;amino acid biosynthetic process&apos;</deletedAxiom>
<deletedAxiom>&apos;diaminopimelate biosynthetic process&apos; SubClassOf &apos;fatty acid derivative biosynthetic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0019878</classIRI>
<classLabel>L-lysine biosynthetic process via aminoadipic acid</classLabel>
<deletedAxiom>&apos;L-lysine biosynthetic process via aminoadipic acid&apos; SubClassOf &apos;L-lysine biosynthetic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0032849</classIRI>
<classLabel>positive regulation of cellular pH reduction</classLabel>
<deletedAxiom>&apos;positive regulation of cellular pH reduction&apos; EquivalentTo &apos;biological regulation&apos; and (http://purl.obolibrary.org/obo/RO_0002213 some &apos;intracellular pH reduction&apos;)</deletedAxiom>
<deletedAxiom>&apos;positive regulation of cellular pH reduction&apos; SubClassOf &apos;positive regulation of biological process&apos;</deletedAxiom>
<deletedAxiom>&apos;positive regulation of cellular pH reduction&apos; SubClassOf &apos;intracellular pH reduction&apos;</deletedAxiom>
<deletedAxiom>&apos;positive regulation of cellular pH reduction&apos; SubClassOf &apos;regulation of cellular pH reduction&apos;</deletedAxiom>
<deletedAxiom>&apos;positive regulation of cellular pH reduction&apos; SubClassOf http://purl.obolibrary.org/obo/RO_0002213 some &apos;intracellular pH reduction&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0032848</classIRI>
<classLabel>negative regulation of cellular pH reduction</classLabel>
<deletedAxiom>&apos;negative regulation of cellular pH reduction&apos; SubClassOf http://purl.obolibrary.org/obo/RO_0002212 some &apos;intracellular pH reduction&apos;</deletedAxiom>
<deletedAxiom>&apos;negative regulation of cellular pH reduction&apos; SubClassOf &apos;regulation of cellular pH reduction&apos;</deletedAxiom>
<deletedAxiom>&apos;negative regulation of cellular pH reduction&apos; EquivalentTo &apos;biological regulation&apos; and (http://purl.obolibrary.org/obo/RO_0002212 some &apos;intracellular pH reduction&apos;)</deletedAxiom>
<deletedAxiom>&apos;negative regulation of cellular pH reduction&apos; SubClassOf &apos;negative regulation of biological process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0032847</classIRI>
<classLabel>regulation of cellular pH reduction</classLabel>
<deletedAxiom>&apos;regulation of cellular pH reduction&apos; SubClassOf http://purl.obolibrary.org/obo/RO_0002211 some &apos;intracellular pH reduction&apos;</deletedAxiom>
<deletedAxiom>&apos;regulation of cellular pH reduction&apos; SubClassOf &apos;regulation of intracellular pH&apos;</deletedAxiom>
<deletedAxiom>&apos;regulation of cellular pH reduction&apos; EquivalentTo &apos;biological regulation&apos; and (http://purl.obolibrary.org/obo/RO_0002211 some &apos;intracellular pH reduction&apos;)</deletedAxiom>
<deletedAxiom>&apos;regulation of cellular pH reduction&apos; SubClassOf &apos;regulation of biological process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0042218</classIRI>
<classLabel>1-aminocyclopropane-1-carboxylate biosynthetic process</classLabel>
<deletedAxiom>&apos;1-aminocyclopropane-1-carboxylate biosynthetic process&apos; SubClassOf &apos;alpha-amino acid biosynthetic process&apos;</deletedAxiom>
<deletedAxiom>&apos;1-aminocyclopropane-1-carboxylate biosynthetic process&apos; SubClassOf &apos;non-proteinogenic amino acid biosynthetic process&apos;</deletedAxiom>
<deletedAxiom>&apos;1-aminocyclopropane-1-carboxylate biosynthetic process&apos; SubClassOf &apos;1-aminocyclopropane-1-carboxylate metabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0042217</classIRI>
<classLabel>1-aminocyclopropane-1-carboxylate catabolic process</classLabel>
<deletedAxiom>&apos;1-aminocyclopropane-1-carboxylate catabolic process&apos; SubClassOf &apos;1-aminocyclopropane-1-carboxylate metabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0140636</classIRI>
<classLabel>copper import into the mitochondrion</classLabel>
<newAxiom>&apos;copper import into the mitochondrion&apos; SubClassOf &apos;intercellular transport&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0042147</classIRI>
<classLabel>retrograde transport, endosome to Golgi</classLabel>
<newAxiom>&apos;retrograde transport, endosome to Golgi&apos; SubClassOf &apos;intercellular transport&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0140597</classIRI>
<classLabel>protein carrier chaperone</classLabel>
<deletedAxiom>&apos;protein carrier chaperone&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000051 some &apos;protein binding&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0140567</classIRI>
<classLabel>membrane protein dislocase activity</classLabel>
<deletedAxiom>&apos;membrane protein dislocase activity&apos; SubClassOf &apos;protein transporter activity&apos;</deletedAxiom>
<newAxiom>&apos;membrane protein dislocase activity&apos; SubClassOf &apos;protein carrier chaperone&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0019773</classIRI>
<classLabel>proteasome core complex, alpha-subunit complex</classLabel>
<deletedAxiom>&apos;proteasome core complex, alpha-subunit complex&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000050 some &apos;intracellular anatomical structure&apos;</deletedAxiom>
<deletedAxiom>&apos;proteasome core complex, alpha-subunit complex&apos; SubClassOf &apos;protein-containing complex&apos;</deletedAxiom>
<newAxiom>&apos;proteasome core complex, alpha-subunit complex&apos; SubClassOf &apos;intracellular protein-containing complex&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0017128</classIRI>
<classLabel>phospholipid scramblase activity</classLabel>
<deletedAxiom>&apos;phospholipid scramblase activity&apos; SubClassOf &apos;phospholipid transporter activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0044743</classIRI>
<classLabel>protein transmembrane import into intracellular organelle</classLabel>
<newAxiom>&apos;protein transmembrane import into intracellular organelle&apos; SubClassOf &apos;intercellular transport&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0044795</classIRI>
<classLabel>trans-Golgi network to recycling endosome transport</classLabel>
<newAxiom>&apos;trans-Golgi network to recycling endosome transport&apos; SubClassOf &apos;intercellular transport&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0030150</classIRI>
<classLabel>protein import into mitochondrial matrix</classLabel>
<newAxiom>&apos;protein import into mitochondrial matrix&apos; SubClassOf &apos;intercellular transport&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0042030</classIRI>
<classLabel>ATPase inhibitor activity</classLabel>
<deletedAxiom>&apos;ATPase inhibitor activity&apos; SubClassOf &apos;ATPase regulator activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0140466</classIRI>
<classLabel>iron-sulfur cluster export from the mitochondrion</classLabel>
<newAxiom>&apos;iron-sulfur cluster export from the mitochondrion&apos; SubClassOf &apos;intercellular transport&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0019629</classIRI>
<classLabel>propionate catabolic process, 2-methylcitrate cycle</classLabel>
<deletedAxiom>&apos;propionate catabolic process, 2-methylcitrate cycle&apos; SubClassOf &apos;propionate catabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0140462</classIRI>
<classLabel>pericentric heterochromatin organization</classLabel>
<deletedAxiom>&apos;pericentric heterochromatin organization&apos; SubClassOf &apos;heterochromatin formation&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0019656</classIRI>
<classLabel>heterolactic fermentation</classLabel>
<deletedAxiom>&apos;heterolactic fermentation&apos; SubClassOf &apos;ethanol metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;heterolactic fermentation&apos; SubClassOf &apos;glucose catabolic process to lactate&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0019658</classIRI>
<classLabel>glucose fermentation to lactate and acetate</classLabel>
<deletedAxiom>&apos;glucose fermentation to lactate and acetate&apos; SubClassOf &apos;glucose catabolic process to lactate&apos;</deletedAxiom>
<newAxiom>&apos;glucose fermentation to lactate and acetate&apos; SubClassOf &apos;lactate metabolic process&apos;</newAxiom>
<newAxiom>&apos;glucose fermentation to lactate and acetate&apos; SubClassOf &apos;fermentation&apos;</newAxiom>
<newAxiom>&apos;glucose fermentation to lactate and acetate&apos; SubClassOf &apos;glucose catabolic process&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0019659</classIRI>
<classLabel>glucose catabolic process to lactate</classLabel>
<deletedAxiom>&apos;glucose catabolic process to lactate&apos; SubClassOf &apos;lactate metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;glucose catabolic process to lactate&apos; SubClassOf &apos;glucose catabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;glucose catabolic process to lactate&apos; SubClassOf &apos;fermentation&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0019661</classIRI>
<classLabel>homolactic fermentation</classLabel>
<deletedAxiom>&apos;homolactic fermentation&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000051 some &apos;L(+)-lactate biosynthetic process from pyruvate&apos;</deletedAxiom>
<deletedAxiom>&apos;homolactic fermentation&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000051 some &apos;canonical glycolysis&apos;</deletedAxiom>
<deletedAxiom>&apos;homolactic fermentation&apos; SubClassOf &apos;glucose catabolic process to lactate&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0019678</classIRI>
<classLabel>propionate metabolic process, methylmalonyl pathway</classLabel>
<deletedAxiom>&apos;propionate metabolic process, methylmalonyl pathway&apos; SubClassOf &apos;propionate metabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0019679</classIRI>
<classLabel>propionate metabolic process, methylcitrate cycle</classLabel>
<deletedAxiom>&apos;propionate metabolic process, methylcitrate cycle&apos; SubClassOf &apos;propionate metabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0005078</classIRI>
<classLabel>MAP-kinase scaffold activity</classLabel>
<newAxiom>&apos;MAP-kinase scaffold activity&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140378</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0044570</classIRI>
<classLabel>starch utilization system complex</classLabel>
<newAxiom>&apos;starch utilization system complex&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140392</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0140357</classIRI>
<classLabel>heme export from vacuole to cytoplasm</classLabel>
<newAxiom>&apos;heme export from vacuole to cytoplasm&apos; SubClassOf &apos;intercellular transport&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0140364</classIRI>
<classLabel>GW body</classLabel>
<deletedAxiom>&apos;GW body&apos; SubClassOf &apos;cytoplasmic ribonucleoprotein granule&apos;</deletedAxiom>
<newAxiom>&apos;GW body&apos; SubClassOf &apos;ribonucleoprotein granule&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0019503</classIRI>
<classLabel>L-proline betaine biosynthetic process</classLabel>
<deletedAxiom>&apos;L-proline betaine biosynthetic process&apos; SubClassOf &apos;L-amino acid biosynthetic process&apos;</deletedAxiom>
<deletedAxiom>&apos;L-proline betaine biosynthetic process&apos; SubClassOf &apos;alkaloid biosynthetic process&apos;</deletedAxiom>
<deletedAxiom>&apos;L-proline betaine biosynthetic process&apos; SubClassOf &apos;amino-acid betaine biosynthetic process&apos;</deletedAxiom>
<deletedAxiom>&apos;L-proline betaine biosynthetic process&apos; SubClassOf &apos;non-proteinogenic amino acid biosynthetic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0140349</classIRI>
<classLabel>laminin network</classLabel>
<newAxiom>&apos;laminin network&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000050 some &apos;non-collagenous component of basement membrane&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0019510</classIRI>
<classLabel>S-adenosylhomocysteine catabolic process</classLabel>
<deletedAxiom>&apos;S-adenosylhomocysteine catabolic process&apos; SubClassOf &apos;L-amino acid catabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;S-adenosylhomocysteine catabolic process&apos; SubClassOf &apos;purine ribonucleoside catabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;S-adenosylhomocysteine catabolic process&apos; SubClassOf &apos;non-proteinogenic amino acid catabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;S-adenosylhomocysteine catabolic process&apos; SubClassOf &apos;sulfur compound catabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;S-adenosylhomocysteine catabolic process&apos; SubClassOf &apos;modified amino acid catabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;S-adenosylhomocysteine catabolic process&apos; SubClassOf &apos;S-adenosylhomocysteine metabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0140333</classIRI>
<classLabel>glycerophospholipid flippase activity</classLabel>
<deletedAxiom>&apos;glycerophospholipid flippase activity&apos; SubClassOf &apos;phospholipid transporter activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0019509</classIRI>
<classLabel>L-methionine salvage from methylthioadenosine</classLabel>
<deletedAxiom>&apos;L-methionine salvage from methylthioadenosine&apos; SubClassOf &apos;L-methionine salvage&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0140341</classIRI>
<classLabel>phosphatidylethanolamine floppase activity</classLabel>
<deletedAxiom>&apos;phosphatidylethanolamine floppase activity&apos; SubClassOf &apos;phospholipid transporter activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0140303</classIRI>
<classLabel>intramembrane lipid transporter activity</classLabel>
<newAxiom>&apos;intramembrane lipid transporter activity&apos; SubClassOf &apos;transporter activity&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0019552</classIRI>
<classLabel>L-glutamate fermentation via 2-hydroxyglutarate</classLabel>
<deletedAxiom>&apos;L-glutamate fermentation via 2-hydroxyglutarate&apos; SubClassOf &apos;amino acid fermentation&apos;</deletedAxiom>
<deletedAxiom>&apos;L-glutamate fermentation via 2-hydroxyglutarate&apos; SubClassOf &apos;L-glutamate catabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0019553</classIRI>
<classLabel>L-glutamate fermentation via L-citramalate</classLabel>
<deletedAxiom>&apos;L-glutamate fermentation via L-citramalate&apos; SubClassOf &apos;L-glutamate catabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;L-glutamate fermentation via L-citramalate&apos; SubClassOf &apos;amino acid fermentation&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0019574</classIRI>
<classLabel>sucrose catabolic process via 3&apos;-ketosucrose</classLabel>
<deletedAxiom>&apos;sucrose catabolic process via 3&apos;-ketosucrose&apos; SubClassOf &apos;phosphate-containing compound metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;sucrose catabolic process via 3&apos;-ketosucrose&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000051 some &apos;fructokinase activity&apos;</deletedAxiom>
<deletedAxiom>&apos;sucrose catabolic process via 3&apos;-ketosucrose&apos; SubClassOf &apos;organophosphate metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;sucrose catabolic process via 3&apos;-ketosucrose&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000051 some &apos;3-ketoglucose-reductase activity&apos;</deletedAxiom>
<deletedAxiom>&apos;sucrose catabolic process via 3&apos;-ketosucrose&apos; SubClassOf &apos;sucrose catabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;sucrose catabolic process via 3&apos;-ketosucrose&apos; SubClassOf &apos;carbohydrate derivative metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;sucrose catabolic process via 3&apos;-ketosucrose&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000051 some &apos;glucoside 3-dehydrogenase activity&apos;</deletedAxiom>
<deletedAxiom>&apos;sucrose catabolic process via 3&apos;-ketosucrose&apos; SubClassOf &apos;glucose metabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0032556</classIRI>
<classLabel>pyrimidine deoxyribonucleotide binding</classLabel>
<deletedAxiom>&apos;pyrimidine deoxyribonucleotide binding&apos; SubClassOf &apos;deoxyribonucleotide binding&apos;</deletedAxiom>
<newAxiom>&apos;pyrimidine deoxyribonucleotide binding&apos; SubClassOf &apos;carbohydrate derivative binding&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0019580</classIRI>
<classLabel>galactarate metabolic process</classLabel>
<newAxiom>&apos;galactarate metabolic process&apos; SubClassOf &apos;carbohydrate metabolic process&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0032547</classIRI>
<classLabel>purine deoxyribonucleoside binding</classLabel>
<deletedAxiom>&apos;purine deoxyribonucleoside binding&apos; SubClassOf &apos;deoxyribonucleoside binding&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0032548</classIRI>
<classLabel>pyrimidine deoxyribonucleoside binding</classLabel>
<deletedAxiom>&apos;pyrimidine deoxyribonucleoside binding&apos; SubClassOf &apos;deoxyribonucleoside binding&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0032552</classIRI>
<classLabel>deoxyribonucleotide binding</classLabel>
<deletedAxiom>&apos;deoxyribonucleotide binding&apos; SubClassOf &apos;nucleotide binding&apos;</deletedAxiom>
<deletedAxiom>&apos;deoxyribonucleotide binding&apos; SubClassOf &apos;carbohydrate derivative binding&apos;</deletedAxiom>
<newAxiom>&apos;deoxyribonucleotide binding&apos; SubClassOf &apos;binding&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0032554</classIRI>
<classLabel>purine deoxyribonucleotide binding</classLabel>
<deletedAxiom>&apos;purine deoxyribonucleotide binding&apos; SubClassOf &apos;deoxyribonucleotide binding&apos;</deletedAxiom>
<newAxiom>&apos;purine deoxyribonucleotide binding&apos; SubClassOf &apos;carbohydrate derivative binding&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0140253</classIRI>
<classLabel>cell-cell fusion</classLabel>
<deletedAxiom>&apos;cell-cell fusion&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000051 some &apos;plasma membrane fusion&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0019427</classIRI>
<classLabel>acetyl-CoA biosynthetic process from acetate</classLabel>
<deletedAxiom>&apos;acetyl-CoA biosynthetic process from acetate&apos; SubClassOf &apos;acetyl-CoA biosynthetic process&apos;</deletedAxiom>
<deletedAxiom>&apos;acetyl-CoA biosynthetic process from acetate&apos; SubClassOf &apos;acetate metabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0019431</classIRI>
<classLabel>acetyl-CoA biosynthetic process from ethanol</classLabel>
<deletedAxiom>&apos;acetyl-CoA biosynthetic process from ethanol&apos; SubClassOf &apos;generation of precursor metabolites and energy&apos;</deletedAxiom>
<deletedAxiom>&apos;acetyl-CoA biosynthetic process from ethanol&apos; SubClassOf &apos;ethanol metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;acetyl-CoA biosynthetic process from ethanol&apos; SubClassOf &apos;acetyl-CoA biosynthetic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0019447</classIRI>
<classLabel>D-cysteine catabolic process</classLabel>
<deletedAxiom>&apos;D-cysteine catabolic process&apos; SubClassOf &apos;sulfur amino acid catabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;D-cysteine catabolic process&apos; SubClassOf &apos;D-amino acid catabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;D-cysteine catabolic process&apos; SubClassOf &apos;cysteine metabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0019448</classIRI>
<classLabel>L-cysteine catabolic process</classLabel>
<deletedAxiom>&apos;L-cysteine catabolic process&apos; SubClassOf &apos;L-cysteine metabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0019451</classIRI>
<classLabel>L-cysteine catabolic process to pyruvate, using cysteine dioxygenase</classLabel>
<deletedAxiom>&apos;L-cysteine catabolic process to pyruvate, using cysteine dioxygenase&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000051 some &apos;cysteine dioxygenase activity&apos;</deletedAxiom>
<deletedAxiom>&apos;L-cysteine catabolic process to pyruvate, using cysteine dioxygenase&apos; SubClassOf &apos;L-cysteine catabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;L-cysteine catabolic process to pyruvate, using cysteine dioxygenase&apos; SubClassOf &apos;pyruvate metabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0019452</classIRI>
<classLabel>taurine biosynthetic process from L-cysteine</classLabel>
<deletedAxiom>&apos;taurine biosynthetic process from L-cysteine&apos; SubClassOf &apos;taurine biosynthetic process&apos;</deletedAxiom>
<deletedAxiom>&apos;taurine biosynthetic process from L-cysteine&apos; SubClassOf &apos;L-cysteine metabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0019454</classIRI>
<classLabel>L-cysteine catabolic process via cystine, using glutathione-cystine transhydrogenase</classLabel>
<deletedAxiom>&apos;L-cysteine catabolic process via cystine, using glutathione-cystine transhydrogenase&apos; SubClassOf &apos;L-cysteine catabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;L-cysteine catabolic process via cystine, using glutathione-cystine transhydrogenase&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000051 some &apos;glutathione-cystine transhydrogenase activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0019455</classIRI>
<classLabel>L-cysteine catabolic process via cystine, using cystine reductase</classLabel>
<deletedAxiom>&apos;L-cysteine catabolic process via cystine, using cystine reductase&apos; SubClassOf &apos;L-cysteine catabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;L-cysteine catabolic process via cystine, using cystine reductase&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000051 some &apos;L-cystine reductase (NADH) activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0019456</classIRI>
<classLabel>L-cysteine catabolic process via cystine, using cysteine transaminase</classLabel>
<deletedAxiom>&apos;L-cysteine catabolic process via cystine, using cysteine transaminase&apos; SubClassOf &apos;L-cysteine catabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;L-cysteine catabolic process via cystine, using cysteine transaminase&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000051 some &apos;L-cysteine transaminase activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0019466</classIRI>
<classLabel>L-ornithine catabolic process via proline</classLabel>
<deletedAxiom>&apos;L-ornithine catabolic process via proline&apos; SubClassOf &apos;L-ornithine catabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0019467</classIRI>
<classLabel>L-ornithine catabolic process, by decarboxylation</classLabel>
<deletedAxiom>&apos;L-ornithine catabolic process, by decarboxylation&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000051 some &apos;carboxy-lyase activity&apos;</deletedAxiom>
<deletedAxiom>&apos;L-ornithine catabolic process, by decarboxylation&apos; SubClassOf &apos;L-ornithine catabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0019472</classIRI>
<classLabel>4-hydroxyproline biosynthetic process</classLabel>
<deletedAxiom>&apos;4-hydroxyproline biosynthetic process&apos; SubClassOf &apos;modified amino acid biosynthetic process&apos;</deletedAxiom>
<deletedAxiom>&apos;4-hydroxyproline biosynthetic process&apos; SubClassOf &apos;non-proteinogenic amino acid biosynthetic process&apos;</deletedAxiom>
<deletedAxiom>&apos;4-hydroxyproline biosynthetic process&apos; SubClassOf &apos;alpha-amino acid biosynthetic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0019476</classIRI>
<classLabel>D-lysine catabolic process</classLabel>
<deletedAxiom>&apos;D-lysine catabolic process&apos; SubClassOf &apos;lysine metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;D-lysine catabolic process&apos; SubClassOf &apos;D-amino acid catabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0019477</classIRI>
<classLabel>L-lysine catabolic process</classLabel>
<deletedAxiom>&apos;L-lysine catabolic process&apos; SubClassOf &apos;lysine metabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0019485</classIRI>
<classLabel>beta-alanine catabolic process to L-alanine</classLabel>
<deletedAxiom>&apos;beta-alanine catabolic process to L-alanine&apos; SubClassOf &apos;L-alanine metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;beta-alanine catabolic process to L-alanine&apos; SubClassOf &apos;beta-alanine catabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0019486</classIRI>
<classLabel>beta-alanine catabolic process to mevalonate semialdehyde, by transamination</classLabel>
<deletedAxiom>&apos;beta-alanine catabolic process to mevalonate semialdehyde, by transamination&apos; SubClassOf &apos;beta-alanine catabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0019492</classIRI>
<classLabel>L-proline salvage</classLabel>
<deletedAxiom>&apos;L-proline salvage&apos; SubClassOf &apos;L-proline biosynthetic process&apos;</deletedAxiom>
<deletedAxiom>&apos;L-proline salvage&apos; SubClassOf &apos;amino acid salvage&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0019394</classIRI>
<classLabel>glucarate catabolic process</classLabel>
<deletedAxiom>&apos;glucarate catabolic process&apos; SubClassOf &apos;aldaric acid catabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_1900829</classIRI>
<classLabel>D-tyrosine catabolic process</classLabel>
<deletedAxiom>&apos;D-tyrosine catabolic process&apos; SubClassOf &apos;D-amino acid catabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;D-tyrosine catabolic process&apos; SubClassOf &apos;aromatic amino acid family catabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_1900832</classIRI>
<classLabel>D-leucine catabolic process</classLabel>
<deletedAxiom>&apos;D-leucine catabolic process&apos; SubClassOf &apos;branched-chain amino acid catabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;D-leucine catabolic process&apos; SubClassOf &apos;D-amino acid catabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_1900833</classIRI>
<classLabel>D-leucine biosynthetic process</classLabel>
<deletedAxiom>&apos;D-leucine biosynthetic process&apos; SubClassOf &apos;D-amino acid biosynthetic process&apos;</deletedAxiom>
<deletedAxiom>&apos;D-leucine biosynthetic process&apos; SubClassOf &apos;branched-chain amino acid biosynthetic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0071995</classIRI>
<classLabel>phytochelatin import into vacuole</classLabel>
<newAxiom>&apos;phytochelatin import into vacuole&apos; SubClassOf &apos;intercellular transport&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0071996</classIRI>
<classLabel>glutathione transmembrane import into vacuole</classLabel>
<newAxiom>&apos;glutathione transmembrane import into vacuole&apos; SubClassOf &apos;intercellular transport&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0140180</classIRI>
<classLabel>centriole scaffold activity</classLabel>
<deletedAxiom>&apos;centriole scaffold activity&apos; SubClassOf &apos;protein-macromolecule adaptor activity&apos;</deletedAxiom>
<newAxiom>&apos;centriole scaffold activity&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140378</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0140176</classIRI>
<classLabel>positive regulation of pyruvate decarboxylation to acetyl-CoA</classLabel>
<deletedAxiom>&apos;positive regulation of pyruvate decarboxylation to acetyl-CoA&apos; SubClassOf &apos;positive regulation of small molecule metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;positive regulation of pyruvate decarboxylation to acetyl-CoA&apos; SubClassOf &apos;positive regulation of phosphate metabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;positive regulation of pyruvate decarboxylation to acetyl-CoA&apos; SubClassOf &apos;positive regulation of biosynthetic process&apos;</deletedAxiom>
<newAxiom>&apos;positive regulation of pyruvate decarboxylation to acetyl-CoA&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140390</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0140147</classIRI>
<classLabel>zinc ion export from vacuole</classLabel>
<newAxiom>&apos;zinc ion export from vacuole&apos; SubClassOf &apos;intercellular transport&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0140146</classIRI>
<classLabel>calcium ion import into vacuole</classLabel>
<newAxiom>&apos;calcium ion import into vacuole&apos; SubClassOf &apos;intercellular transport&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0140156</classIRI>
<classLabel>multiplexin collagen trimer</classLabel>
<newAxiom>&apos;multiplexin collagen trimer&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140392</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0140155</classIRI>
<classLabel>hexagonal collagen network of basement membrane</classLabel>
<deletedAxiom>&apos;hexagonal collagen network of basement membrane&apos; SubClassOf &apos;complex of network-forming collagens&apos;</deletedAxiom>
<deletedAxiom>&apos;hexagonal collagen network of basement membrane&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000050 some &apos;collagenous component of basement membrane&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0140145</classIRI>
<classLabel>copper ion export from vacuole</classLabel>
<newAxiom>&apos;copper ion export from vacuole&apos; SubClassOf &apos;intercellular transport&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0009940</classIRI>
<classLabel>amino-terminal vacuolar sorting propeptide binding</classLabel>
<deletedAxiom>&apos;amino-terminal vacuolar sorting propeptide binding&apos; SubClassOf &apos;vacuolar sorting signal binding&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0010944</classIRI>
<classLabel>negative regulation of transcription by competitive promoter binding</classLabel>
<deletedAxiom>&apos;negative regulation of transcription by competitive promoter binding&apos; SubClassOf &apos;negative regulation of DNA-templated transcription&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0034912</classIRI>
<classLabel>phthalate 3,4-cis-dihydrodiol dehydrogenase activity</classLabel>
<deletedAxiom>&apos;phthalate 3,4-cis-dihydrodiol dehydrogenase activity&apos; SubClassOf &apos;oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0007300</classIRI>
<classLabel>ovarian nurse cell to oocyte transport</classLabel>
<deletedAxiom>&apos;ovarian nurse cell to oocyte transport&apos; SubClassOf &apos;transport&apos;</deletedAxiom>
<newAxiom>&apos;ovarian nurse cell to oocyte transport&apos; SubClassOf &apos;intercellular transport&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0019304</classIRI>
<classLabel>anaerobic rhamnose catabolic process</classLabel>
<deletedAxiom>&apos;anaerobic rhamnose catabolic process&apos; SubClassOf &apos;rhamnose catabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0103111</classIRI>
<classLabel>protein-N(pi)-phosphohistidine--N-acetyl-D-glucosamine phosphotransferase activity</classLabel>
<deletedAxiom>&apos;protein-N(pi)-phosphohistidine--N-acetyl-D-glucosamine phosphotransferase activity&apos; SubClassOf &apos;phosphotransferase activity, alcohol group as acceptor&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0019317</classIRI>
<classLabel>fucose catabolic process</classLabel>
<deletedAxiom>&apos;fucose catabolic process&apos; SubClassOf &apos;hexose catabolic process&apos;</deletedAxiom>
<deletedAxiom>&apos;fucose catabolic process&apos; SubClassOf &apos;fucose metabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0007342</classIRI>
<classLabel>fusion of sperm to egg plasma membrane involved in single fertilization</classLabel>
<deletedAxiom>&apos;fusion of sperm to egg plasma membrane involved in single fertilization&apos; SubClassOf &apos;plasma membrane fusion&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0019333</classIRI>
<classLabel>denitrification pathway</classLabel>
<deletedAxiom>&apos;denitrification pathway&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000051 some &apos;nitrate reductase activity&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0046922</classIRI>
<classLabel>peptide-O-fucosyltransferase activity</classLabel>
<deletedAxiom>&apos;peptide-O-fucosyltransferase activity&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000050 some &apos;protein O-linked glycosylation via fucose&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0019343</classIRI>
<classLabel>L-cysteine biosynthetic process via L-cystathionine</classLabel>
<deletedAxiom>&apos;L-cysteine biosynthetic process via L-cystathionine&apos; SubClassOf &apos;L-cysteine biosynthetic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0019344</classIRI>
<classLabel>L-cysteine biosynthetic process</classLabel>
<deletedAxiom>&apos;L-cysteine biosynthetic process&apos; SubClassOf &apos;L-cysteine metabolic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0019345</classIRI>
<classLabel>L-cysteine biosynthetic process via S-sulfo-L-cysteine</classLabel>
<deletedAxiom>&apos;L-cysteine biosynthetic process via S-sulfo-L-cysteine&apos; SubClassOf &apos;L-cysteine biosynthetic process&apos;</deletedAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0019346</classIRI>
<classLabel>transsulfuration</classLabel>
<deletedAxiom>&apos;transsulfuration&apos; SubClassOf &apos;L-cysteine metabolic process&apos;</deletedAxiom>
<newAxiom>&apos;transsulfuration&apos; SubClassOf &apos;proteinogenic amino acid metabolic process&apos;</newAxiom>
<newAxiom>&apos;transsulfuration&apos; SubClassOf &apos;L-amino acid metabolic process&apos;</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0032311</classIRI>
<classLabel>angiogenin-PRI complex</classLabel>
<deletedAxiom>&apos;angiogenin-PRI complex&apos; SubClassOf http://purl.obolibrary.org/obo/BFO_0000050 some &apos;extracellular region&apos;</deletedAxiom>
<deletedAxiom>&apos;angiogenin-PRI complex&apos; SubClassOf &apos;protein-containing complex&apos;</deletedAxiom>
<newAxiom>&apos;angiogenin-PRI complex&apos; SubClassOf http://purl.obolibrary.org/obo/GO_0140392</newAxiom>
</changedClass>
<changedClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0046967</classIRI>
<classLabel>cytosol to endoplasmic reticulum transport</classLabel>
<newAxiom>&apos;cytosol to endoplasmic reticulum transport&apos; SubClassOf &apos;intercellular transport&apos;</newAxiom>
</changedClass>
</changedClasses>
<newClasses>
<newClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0120575</classIRI>
<classLabel>L-dopa catabolic process</classLabel>
<newAxiom>'L-dopa catabolic process' SubClassOf 'L-dopa metabolic process'</newAxiom>
<newAxiom>'L-dopa catabolic process' SubClassOf 'modified amino acid catabolic process'</newAxiom>
<newAxiom>'L-dopa catabolic process' SubClassOf 'aromatic amino acid family catabolic process'</newAxiom>
<newAxiom>'L-dopa catabolic process' SubClassOf 'non-proteinogenic amino acid catabolic process'</newAxiom>
<newAxiom>'L-dopa catabolic process' SubClassOf 'L-amino acid catabolic process'</newAxiom>
</newClass>
<newClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0120574</classIRI>
<classLabel>GPI anchor remodelling</classLabel>
<newAxiom>'GPI anchor remodelling' SubClassOf http://purl.obolibrary.org/obo/BFO_0000050 some 'GPI anchored protein biosynthesis'</newAxiom>
<newAxiom>'GPI anchor remodelling' SubClassOf 'protein maturation'</newAxiom>
</newClass>
<newClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0120573</classIRI>
<classLabel>FAHFA hydrolase activity</classLabel>
<newAxiom>'FAHFA hydrolase activity' SubClassOf 'carboxylic ester hydrolase activity'</newAxiom>
</newClass>
<newClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0160312</classIRI>
<classLabel>octopamine loading into synaptic vesicle</classLabel>
<newAxiom>'octopamine loading into synaptic vesicle' SubClassOf 'octopamine transport'</newAxiom>
<newAxiom>'octopamine loading into synaptic vesicle' SubClassOf 'neurotransmitter loading into synaptic vesicle'</newAxiom>
</newClass>
<newClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0160311</classIRI>
<classLabel>tyramine loading into synaptic vesicle</classLabel>
<newAxiom>'tyramine loading into synaptic vesicle' SubClassOf 'tyramine transport'</newAxiom>
<newAxiom>'tyramine loading into synaptic vesicle' SubClassOf 'neurotransmitter loading into synaptic vesicle'</newAxiom>
</newClass>
<newClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0160310</classIRI>
<classLabel>dopamine loading into synaptic vesicle</classLabel>
<newAxiom>'dopamine loading into synaptic vesicle' SubClassOf 'neurotransmitter loading into synaptic vesicle'</newAxiom>
<newAxiom>'dopamine loading into synaptic vesicle' SubClassOf 'dopamine transport'</newAxiom>
</newClass>
<newClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0170074</classIRI>
<classLabel>RADAR pathway</classLabel>
<newAxiom>'RADAR pathway' SubClassOf 'proteasome-mediated ubiquitin-dependent protein catabolic process'</newAxiom>
</newClass>
<newClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0170075</classIRI>
<classLabel>negative regluation of nuclear-transribed mRNA catabolic process, no-go decay</classLabel>
<newAxiom>'negative regluation of nuclear-transribed mRNA catabolic process, no-go decay' SubClassOf http://purl.obolibrary.org/obo/RO_0002212 some 'nuclear-transcribed mRNA catabolic process, no-go decay'</newAxiom>
<newAxiom>'negative regluation of nuclear-transribed mRNA catabolic process, no-go decay' EquivalentTo 'biological regulation' and (http://purl.obolibrary.org/obo/RO_0002212 some 'nuclear-transcribed mRNA catabolic process, no-go decay')</newAxiom>
<newAxiom>'negative regluation of nuclear-transribed mRNA catabolic process, no-go decay' SubClassOf 'negative regulation of mRNA catabolic process'</newAxiom>
</newClass>
<newClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0180067</classIRI>
<classLabel>terreate biosynthetic process</classLabel>
<newAxiom>'terreate biosynthetic process' SubClassOf 'epoxide metabolic process'</newAxiom>
<newAxiom>'terreate biosynthetic process' SubClassOf 'ether biosynthetic process'</newAxiom>
<newAxiom>'terreate biosynthetic process' SubClassOf 'olefinic compound biosynthetic process'</newAxiom>
<newAxiom>'terreate biosynthetic process' SubClassOf 'quinone biosynthetic process'</newAxiom>
<newAxiom>'terreate biosynthetic process' SubClassOf 'tertiary alcohol biosynthetic process'</newAxiom>
</newClass>
<newClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0180069</classIRI>
<classLabel>positive regulation of terreate biosynthetic process</classLabel>
<newAxiom>'positive regulation of terreate biosynthetic process' SubClassOf http://purl.obolibrary.org/obo/RO_0002213 some 'terreate biosynthetic process'</newAxiom>
<newAxiom>'positive regulation of terreate biosynthetic process' EquivalentTo 'biological regulation' and (http://purl.obolibrary.org/obo/RO_0002213 some 'terreate biosynthetic process')</newAxiom>
<newAxiom>'positive regulation of terreate biosynthetic process' SubClassOf 'positive regulation of alcohol biosynthetic process'</newAxiom>
<newAxiom>'positive regulation of terreate biosynthetic process' SubClassOf 'regulation of ketone biosynthetic process'</newAxiom>
</newClass>
<newClass>
<classIRI>http://purl.obolibrary.org/obo/GO_7770041</classIRI>
<classLabel>periplastidial membrane</classLabel>
<newAxiom>'periplastidial membrane' SubClassOf 'plastid membrane'</newAxiom>
</newClass>
<newClass>
<classIRI>http://purl.obolibrary.org/obo/GO_7770042</classIRI>
<classLabel>bindosome complex</classLabel>
<newAxiom>'bindosome complex' SubClassOf 'membrane protein complex'</newAxiom>
</newClass>
<newClass>
<classIRI>http://purl.obolibrary.org/obo/GO_7770040</classIRI>
<classLabel>epiplastidial membrane</classLabel>
<newAxiom>'epiplastidial membrane' SubClassOf 'plastid membrane'</newAxiom>
</newClass>
<newClass>
<classIRI>http://purl.obolibrary.org/obo/GO_7770038</classIRI>
<classLabel>melanosomal lumen acidification</classLabel>
<newAxiom>'melanosomal lumen acidification' SubClassOf 'intracellular pH reduction'</newAxiom>
</newClass>
<newClass>
<classIRI>http://purl.obolibrary.org/obo/GO_7770039</classIRI>
<classLabel>melanosomal lumen pH elevation</classLabel>
<newAxiom>'melanosomal lumen pH elevation' SubClassOf 'intracellular pH elevation'</newAxiom>
</newClass>
<newClass>
<classIRI>http://purl.obolibrary.org/obo/GO_7770052</classIRI>
<classLabel>endoplasmic reticulum-lysosome membrane contact site</classLabel>
<newAxiom>'endoplasmic reticulum-lysosome membrane contact site' SubClassOf 'endoplasmic reticulum-vacuole membrane contact site'</newAxiom>
</newClass>
<newClass>
<classIRI>http://purl.obolibrary.org/obo/GO_7770053</classIRI>
<classLabel>nucleotide-binding leucine-rich repeat receptor complex</classLabel>
<newAxiom>'nucleotide-binding leucine-rich repeat receptor complex' SubClassOf 'signaling receptor complex'</newAxiom>
</newClass>
<newClass>
<classIRI>http://purl.obolibrary.org/obo/GO_7770050</classIRI>
<classLabel>obsolete N6-isopentenyl-AMP deaminase activity</classLabel>
</newClass>
<newClass>
<classIRI>http://purl.obolibrary.org/obo/GO_7770051</classIRI>
<classLabel>mitochondrial-lysosomal membrane contact site</classLabel>
<newAxiom>'mitochondrial-lysosomal membrane contact site' SubClassOf 'vacuole-mitochondrion membrane contact site'</newAxiom>
</newClass>
<newClass>
<classIRI>http://purl.obolibrary.org/obo/GO_7770049</classIRI>
<classLabel>obsolete N6,N6-dimethyl-AMP deaminase activity</classLabel>
</newClass>
<newClass>
<classIRI>http://purl.obolibrary.org/obo/GO_7770047</classIRI>
<classLabel>obsolete N6,N6-dimethyladenosine kinase activity</classLabel>
</newClass>
<newClass>
<classIRI>http://purl.obolibrary.org/obo/GO_7770048</classIRI>
<classLabel>obsolete N6-isopentenyladenosine kinase activity</classLabel>
</newClass>
<newClass>
<classIRI>http://purl.obolibrary.org/obo/GO_7770045</classIRI>
<classLabel>negative regulation of GCN2-mediated signaling</classLabel>
<newAxiom>'negative regulation of GCN2-mediated signaling' SubClassOf 'negative regulation of intracellular signal transduction'</newAxiom>
<newAxiom>'negative regulation of GCN2-mediated signaling' EquivalentTo 'biological regulation' and (http://purl.obolibrary.org/obo/RO_0002212 some 'GCN2-mediated signaling')</newAxiom>
<newAxiom>'negative regulation of GCN2-mediated signaling' SubClassOf http://purl.obolibrary.org/obo/RO_0002212 some 'GCN2-mediated signaling'</newAxiom>
<newAxiom>'negative regulation of GCN2-mediated signaling' SubClassOf 'regulation of cellular response to stress'</newAxiom>
</newClass>
<newClass>
<classIRI>http://purl.obolibrary.org/obo/GO_7770046</classIRI>
<classLabel>obsolete N6-methyladenosine kinase activity</classLabel>
</newClass>
<newClass>
<classIRI>http://purl.obolibrary.org/obo/GO_7770043</classIRI>
<classLabel>lipid chaperone activity</classLabel>
<newAxiom>'lipid chaperone activity' SubClassOf http://purl.obolibrary.org/obo/BFO_0000051 some 'lipid binding'</newAxiom>
<newAxiom>'lipid chaperone activity' SubClassOf 'lipid carrier activity'</newAxiom>
</newClass>
<newClass>
<classIRI>http://purl.obolibrary.org/obo/GO_7770044</classIRI>
<classLabel>phycoerythrobilin synthase activity</classLabel>
<newAxiom>'phycoerythrobilin synthase activity' SubClassOf 'oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor'</newAxiom>
</newClass>
<newClass>
<classIRI>http://purl.obolibrary.org/obo/GO_7770056</classIRI>
<classLabel>multicellular organismal-level extracellular fluid acidification</classLabel>
<newAxiom>'multicellular organismal-level extracellular fluid acidification' SubClassOf 'pH reduction'</newAxiom>
<newAxiom>'multicellular organismal-level extracellular fluid acidification' SubClassOf 'multicellular organismal process'</newAxiom>
</newClass>
<newClass>
<classIRI>http://purl.obolibrary.org/obo/GO_7770054</classIRI>
<classLabel>tRNA(Val) (adenine(37)-N6)-methyltransferase activity</classLabel>
<newAxiom>'tRNA(Val) (adenine(37)-N6)-methyltransferase activity' SubClassOf 'N-methyltransferase activity'</newAxiom>
<newAxiom>'tRNA(Val) (adenine(37)-N6)-methyltransferase activity' SubClassOf 'tRNA (adenine) methyltransferase activity'</newAxiom>
</newClass>
<newClass>
<classIRI>http://purl.obolibrary.org/obo/GO_7770055</classIRI>
<classLabel>intestinal lumen acidification</classLabel>
<newAxiom>'intestinal lumen acidification' SubClassOf 'multicellular organismal-level extracellular fluid acidification'</newAxiom>
</newClass>
<newClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0140400</classIRI>
<classLabel>embryonic sheath</classLabel>
<newAxiom>'embryonic sheath' SubClassOf 'specialized extracellular matrix'</newAxiom>
</newClass>
<newClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0140389</classIRI>
<classLabel>pattern recognition receptor complex</classLabel>
<newAxiom>'pattern recognition receptor complex' SubClassOf 'signaling receptor complex'</newAxiom>
</newClass>
<newClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0140388</classIRI>
<classLabel>protein translocation chaperone activity</classLabel>
<newAxiom>'protein translocation chaperone activity' SubClassOf 'protein carrier activity'</newAxiom>
<newAxiom>'protein translocation chaperone activity' SubClassOf 'ATP-dependent activity'</newAxiom>
</newClass>
<newClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0140392</classIRI>
<classLabel>extracellular protein-containing complex</classLabel>
<newAxiom>'extracellular protein-containing complex' SubClassOf 'protein-containing complex'</newAxiom>
<newAxiom>'extracellular protein-containing complex' EquivalentTo 'protein-containing complex' and (http://purl.obolibrary.org/obo/BFO_0000050 some 'extracellular region')</newAxiom>
<newAxiom>'extracellular protein-containing complex' SubClassOf http://purl.obolibrary.org/obo/BFO_0000050 some 'extracellular region'</newAxiom>
</newClass>
<newClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0140391</classIRI>
<classLabel>negative regulation of acetyl-CoA biosynthesis</classLabel>
<newAxiom>'negative regulation of acetyl-CoA biosynthesis' SubClassOf 'negative regulation of nucleobase-containing compound metabolic process'</newAxiom>
<newAxiom>'negative regulation of acetyl-CoA biosynthesis' SubClassOf 'negative regulation of phosphate metabolic process'</newAxiom>
<newAxiom>'negative regulation of acetyl-CoA biosynthesis' EquivalentTo 'biological regulation' and (http://purl.obolibrary.org/obo/RO_0002212 some 'acetyl-CoA biosynthetic process')</newAxiom>
<newAxiom>'negative regulation of acetyl-CoA biosynthesis' SubClassOf 'negative regulation of small molecule metabolic process'</newAxiom>
<newAxiom>'negative regulation of acetyl-CoA biosynthesis' SubClassOf 'negative regulation of biosynthetic process'</newAxiom>
<newAxiom>'negative regulation of acetyl-CoA biosynthesis' SubClassOf 'regulation of acyl-CoA biosynthetic process'</newAxiom>
<newAxiom>'negative regulation of acetyl-CoA biosynthesis' SubClassOf http://purl.obolibrary.org/obo/RO_0002212 some 'acetyl-CoA biosynthetic process'</newAxiom>
</newClass>
<newClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0140390</classIRI>
<classLabel>positive regulation of acetyl-CoA biosynthesis</classLabel>
<newAxiom>'positive regulation of acetyl-CoA biosynthesis' SubClassOf 'regulation of acyl-CoA biosynthetic process'</newAxiom>
<newAxiom>'positive regulation of acetyl-CoA biosynthesis' SubClassOf http://purl.obolibrary.org/obo/RO_0002213 some 'acetyl-CoA biosynthetic process'</newAxiom>
<newAxiom>'positive regulation of acetyl-CoA biosynthesis' EquivalentTo 'biological regulation' and (http://purl.obolibrary.org/obo/RO_0002213 some 'acetyl-CoA biosynthetic process')</newAxiom>
<newAxiom>'positive regulation of acetyl-CoA biosynthesis' SubClassOf 'positive regulation of phosphate metabolic process'</newAxiom>
<newAxiom>'positive regulation of acetyl-CoA biosynthesis' SubClassOf 'positive regulation of small molecule metabolic process'</newAxiom>
<newAxiom>'positive regulation of acetyl-CoA biosynthesis' SubClassOf 'positive regulation of biosynthetic process'</newAxiom>
</newClass>
<newClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0140379</classIRI>
<classLabel>amino acid acyltransferase activity</classLabel>
<newAxiom>'amino acid acyltransferase activity' SubClassOf 'acyltransferase activity'</newAxiom>
</newClass>
<newClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0140378</classIRI>
<classLabel>protein complex scaffold activity</classLabel>
<newAxiom>'protein complex scaffold activity' SubClassOf 'structural molecule activity'</newAxiom>
</newClass>
<newClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0140387</classIRI>
<classLabel>negative regulation of L-glutamate biosynthetic process</classLabel>
<newAxiom>'negative regulation of L-glutamate biosynthetic process' SubClassOf http://purl.obolibrary.org/obo/RO_0002212 some 'L-glutamate biosynthetic process'</newAxiom>
<newAxiom>'negative regulation of L-glutamate biosynthetic process' EquivalentTo 'biological regulation' and (http://purl.obolibrary.org/obo/RO_0002212 some 'L-glutamate biosynthetic process')</newAxiom>
<newAxiom>'negative regulation of L-glutamate biosynthetic process' SubClassOf 'negative regulation of small molecule metabolic process'</newAxiom>
<newAxiom>'negative regulation of L-glutamate biosynthetic process' SubClassOf 'negative regulation of amino acid biosynthetic process'</newAxiom>
</newClass>
<newClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0140386</classIRI>
<classLabel>tRNA (cytidine(4)/adenine(4)-2'-O-ribose)-methyltransferase activity</classLabel>
<newAxiom>'tRNA (cytidine(4)/adenine(4)-2'-O-ribose)-methyltransferase activity' SubClassOf 'tRNA (cytidine) methyltransferase activity'</newAxiom>
<newAxiom>'tRNA (cytidine(4)/adenine(4)-2'-O-ribose)-methyltransferase activity' SubClassOf 'tRNA (adenine) methyltransferase activity'</newAxiom>
</newClass>
<newClass>
<classIRI>http://purl.obolibrary.org/obo/GO_0140385</classIRI>
<classLabel>amino acid transaminase activity</classLabel>
<newAxiom>'amino acid transaminase activity' SubClassOf 'transaminase activity'</newAxiom>
</newClass>
</newClasses>
<deletedClasses>
</deletedClasses>
</diffReport>