format-version: 1.2
date: 18:10:2009 19:55
subsetdef: uberon_slim "Uberon slim"
synonymtypedef: PLURAL "plural term"
default-namespace: uberon
remark: cvs version $Revision: 1.75 $
treat-xrefs-as-equivalent: CARO
treat-xrefs-as-equivalent: CL

[Term]
id: UBERON:0000000
name: processual entity
def: "An occurrent [span:Occurrent] that exists in time by occurring or happening, has temporal parts and always involves and depends on some entity." [span:ProcessualEntity]
disjoint_from: UBERON:0001062 ! anatomical entity
created_by: cjm
creation_date: 2009-04-09T05:51:24Z

[Term]
id: UBERON:0000002
name: cervix
def: "Lower, narrow portion of the uterus where it joins with the top end of the vagina." [Wikipedia:Cervix]
comment: This class was created automatically from a combination of ontologies.
subset: uberon_slim
synonym: "Cervical canal" EXACT []
synonym: "cervical canal" EXACT []
synonym: "Cervical canal of uterus" EXACT []
synonym: "cervical canal of uterus" EXACT []
synonym: "cervix" EXACT []
synonym: "Cervix of uterus" EXACT []
synonym: "cervix of uterus" EXACT []
synonym: "Neck of uterus" EXACT []
synonym: "neck of uterus" EXACT []
synonym: "Uterine cervix" EXACT []
synonym: "uterine cervix" EXACT []
xref: FMA:17740 ! Cervix of uterus
xref: GAID:376 ! cervix
xref: HOG:0001359 ! uterine cervix
xref: MA:0000392 ! uterine cervix
xref: MAT:0000292 ! cervix
xref: OpenCyc:Mx4rvVipEJwpEbGdrcN5Y29ycA
is_a: UBERON:0001560 ! neck of organ
relationship: continuous_with UBERON:0000996 ! vagina
relationship: part_of UBERON:0000995 ! uterus
xref: BTO:0001421 ! uterine cervix

[Term]
id: UBERON:0000003
name: naris
def: "One of the two channels of the nose, from the point where they bifurcate to the external opening. In birds and mammals, they contain branched bones or cartilages called turbinates, whose function is to warm air on inhalation and remove moisture on exhalation. Fish do not breathe through their noses, but they do have two small holes used for smelling which may be called nostrils." [Wikipedia:Naris]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "olfactory pits" RELATED []
xref: AAO:0000311 ! naris
xref: EHDAA:9083 ! naris
xref: FMA:59645 ! External naris
xref: HOG:0000663 ! naris
xref: MA:0001320 ! external naris
xref: TAO:0001427 ! anterior naris
xref: XAO:0003033 ! nostril
xref: ZFA:0001427 ! anterior naris
is_a: UBERON:0000464 ! anatomical space
relationship: part_of UBERON:0002109 ! set of nares

[Term]
id: UBERON:0000004
name: olfactory apparatus
def: "Surface structure that houses the nostrils, or nares, which admit and expel air for respiration in conjunction with the mouth. and behind the nose is the olfactory mucosa and the sinuses. Behind the nasal cavity, air next passes through the pharynx, shared with the digestive system, and then into the rest of the respiratory system. In humans, the nose is located centrally on the face; on most other mammals, it is on the upper tip of the snout. In cetaceans, the nose has been reduced to the nostrils, which have migrated to the top of the head, producing a more streamlined body shape and the ability to breathe while mostly submerged. Conversely, the elephant's nose has elaborated into a long, muscular, manipulative organ called the trunk. GO: The nose is the specialized structure of the face that serves as the organ of the sense of smell and as part of the respiratory system. Includes the nasi externus (external nose) and cavitas nasi (nasal cavity)." [Wikipedia:Nose]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "nose" EXACT []
synonym: "peripheral olfactory organ" EXACT []
synonym: "proboscis" RELATED []
xref: BTO:0000840
xref: EFO:0000828 ! nose
xref: EHDAA:1502 ! nose
xref: FMA:46472 ! Nose
xref: GAID:77 ! nose
xref: MA:0000281 ! nose
xref: MAT:0000139 ! nose
xref: MIAA:0000139 ! nose
xref: OpenCyc:Mx4rvViCbJwpEbGdrcN5Y29ycA
xref: TAO:0000047 ! peripheral olfactory organ
xref: ZFA:0000047 ! peripheral olfactory organ
is_a: UBERON:0000005 ! chemosensory sensory organ
relationship: develops_from UBERON:0003050 ! olfactory placode
xref: ncithesaurus:Nose ! Nose

[Term]
id: UBERON:0000005
name: chemosensory sensory organ
def: "." [Wikipedia:Olfactory_system]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "olfactory system" EXACT []
xref: AAO:0000334 ! olfactory_system
xref: BILA:0000144
xref: FBbt:00005157 ! chemosensory sensory organ
xref: FMA:7190 ! Olfactory system
xref: MA:0002445 ! olfactory system
xref: TAO:0001149 ! olfactory system
xref: XAO:0000201 ! olfactory apparatus
xref: ZFA:0001149 ! olfactory system
is_a: UBERON:0000020 ! sense organ

[Term]
id: UBERON:0000006
name: islet of Langerhans
def: "." [Wikipedia:Islet_of_Langerhans]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "endocrine pancreas" RELATED []
synonym: "islet of Langerhans" EXACT []
synonym: "islet of langerhans" RELATED []
synonym: "Islets of Langerhans" EXACT []
synonym: "islets of langerhans" EXACT []
synonym: "Pancreatic insula" EXACT []
synonym: "pancreatic insula" EXACT []
synonym: "Pancreatic islet" EXACT []
synonym: "pancreatic islet" EXACT []
xref: BTO:0000991
xref: EFO:0000856 ! islet of Langerhans
xref: FMA:16016 ! Pancreatic islet
xref: GAID:324 ! islets of langerhan
xref: HOG:0000646 ! islet of Langerhans
xref: MA:0000127 ! pancreatic islet
xref: MAT:0000076 ! islet of Langerhans
xref: MIAA:0000076 ! islet of Langerhans
xref: XAO:0000159 ! Islets of Langerhans
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001264 ! pancreas
xref: ncithesaurus:Islet_of_Langerhans ! Islet of Langerhans

[Term]
id: UBERON:0000007
name: pituitary gland
def: "The pituitary gland is an endocrine gland that secretes hormones that regulate many other glands [GO]. An endocrine gland located ventral to the diencephalon and derived from mixed neuroectodermal and non neuroectodermal origin [ZFIN]." [Wikipedia:Pituitary_gland, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "hypophysis" RELATED []
synonym: "Hypophysis cerebri" EXACT []
synonym: "hypophysis cerebri" RELATED []
synonym: "Pituitary" EXACT []
synonym: "pituitary" EXACT []
synonym: "Pituitary gland" EXACT []
xref: EFO:0000857 ! pituitary
xref: EHDAA:2183 ! pituitary
xref: EHDAA:4477 ! pituitary
xref: FMA:13889 ! Pituitary gland
xref: GAID:457 ! pituitary gland
xref: MA:0000176 ! pituitary gland
xref: MAT:0000077 ! pituitary
xref: MIAA:0000077 ! pituitary
xref: ncithesaurus:Pituitary_Gland
xref: OpenCyc:Mx4rv6NQYJwpEbGdrcN5Y29ycA
xref: TAO:0000118 ! hypophysis
xref: XAO:0000161
xref: ZFA:0000118 ! hypophysis
is_a: UBERON:0002530 ! gland
relationship: part_of UBERON:0000949 ! endocrine system
relationship: part_of UBERON:0001894 ! diencephalon

[Term]
id: UBERON:0000009
name: submucosa
def: "." [Wikipedia:Submucosa]
subset: uberon_slim
xref: FMA:85391 ! Submucosa
is_a: UBERON:0000064 ! organ part
xref: ncithesaurus:Submucosa ! Submucosa
xref: BTO:0002107 ! submucosa

[Term]
id: UBERON:0000010
name: peripheral nervous system
def: "Nervous structures including ganglia outside of the central nervous system. Divided into somatic nervous system and autonomic nervous system" [FB:gg, OMD:peripheral+nervous+system, Wikipedia:Peripheral_nervous_system, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "PNS" RELATED []
xref: AAO:0000429 ! peripheral_nervous_system
xref: BILA:0000081
xref: BTO:0001028
xref: EFO:0000891 ! peripheral nervous system
xref: EHDAA:2893 ! peripheral nervous system
xref: FBbt:00005098 ! peripheral nervous system
xref: FMA:9903 ! Peripheral nervous system
xref: GAID:715 ! peripheral nervous system
xref: HOG:0000399 ! peripheral nervous system
xref: MA:0000218 ! peripheral nervous system
xref: MAT:0000338 ! peripheral nervous system
xref: MIAA:0000338 ! peripheral nervous system
xref: NIF_GrossAnatomy:birnlex_1111 ! Peripheral nervous system
xref: TAO:0000142 ! peripheral nervous system
xref: XAO:0000178 ! peripheral nervous system
xref: ZFA:0000142 ! peripheral nervous system
is_a: UBERON:0000073 ! regional part of nervous system
relationship: part_of UBERON:0001016 ! nervous system
xref: ncithesaurus:Peripheral_Nervous_System ! Peripheral Nervous System

[Term]
id: UBERON:0000011
name: parasympathetic nervous system
def: "The parasympathetic nervous system (PSNS) is a division of the autonomic nervous system (ANS), along with the sympathetic nervous system (SNS) and enteric nervous system (ENS). The ANS is a subdivision of the peripheral nervous system (PNS). ANS sends fibers to three tissues: cardiac muscle, smooth muscle, or glandular tissue. This stimulation, sympathetic or parasympathetic, is to control smooth muscle contraction, regulate cardiac muscle, or stimulate or inhibit glandular secretion [Wikipedia]. The parasympathetic nervous system is one of the two divisions of the vertebrate autonomic nervous system. Parasympathetic nerves emerge cranially as pre ganglionic fibers from oculomotor, facial, glossopharyngeal and vagus and from the sacral region of the spinal cord. Most neurons are cholinergic and responses are mediated by muscarinic receptors. The parasympathetic system innervates, for example: salivary glands, thoracic and abdominal viscera, bladder and genitalia [GO]." [Wikipedia:Parasympathetic_nervous_system]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Parasympathetic nervous system" EXACT []
synonym: "Parasympathetic part of autonomic division of nervous system" EXACT []
synonym: "parasympathetic part of autonomic division of nervous system" EXACT []
synonym: "PNS - parasympathetic" EXACT []
synonym: "pns - parasympathetic" EXACT []
xref: EFO:0000894 ! parasympathetic nervous system
xref: EHDA:10096 ! parasympathetic
xref: FMA:9907 ! Parasympathetic nervous system
xref: GAID:708 ! parasympathetic nervous system
xref: HOG:0000755 ! parasympathetic nervous system
xref: MA:0000223 ! parasympathetic nervous system
xref: MAT:0000101 ! PNS - parasympathetic
xref: MIAA:0000101 ! PNS - parasympathetic
xref: NIF_GrossAnatomy:birnlex_2517 ! Parasympathetic nervous system
xref: TAO:0001575 ! parasympathetic nervous system
xref: ZFA:0001575 ! parasympathetic nervous system
is_a: UBERON:0002410 ! autonomic nervous system
relationship: part_of UBERON:0002410 ! autonomic nervous system
xref: ncithesaurus:Parasympathetic_Nervous_System ! Parasympathetic Nervous System
xref: BTO:0001833 ! parasympathetic nervous system

[Term]
id: UBERON:0000012
name: somatic nervous system
def: "." [Wikipedia:Somatic_nervous_system]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "PNS - somatic" EXACT []
synonym: "pns - somatic" EXACT []
xref: EFO:0000892 ! somatic nervous system
xref: EFO:0000898 ! somatic nervous system
xref: FMA:9904 ! Somatic nervous system
xref: MA:0002850 ! somatic nervous system
xref: MAT:0000099 ! PNS - somatic
xref: MAT:0000342 ! somatic nervous system
xref: MIAA:0000099 ! PNS - somatic
xref: MIAA:0000342 ! somatic nervous system
xref: WBbt:0005760 ! somatic nervous system
is_a: UBERON:0000073 ! regional part of nervous system
relationship: part_of UBERON:0000010 ! peripheral nervous system

[Term]
id: UBERON:0000013
name: sympathetic nervous system
def: "The Sympathetic Nervous System (SNS) is a branch of the autonomic nervous system along with the enteric nervous system and parasympathetic nervous system. It is always active at a basal level (called sympathetic tone) and becomes more active during times of stress. Its actions during the stress response comprise the fight-or-flight response [Wikipedia]. he sympathetic nervous system is one of the two divisions of the vertebrate autonomic nervous system (the other being the parasympathetic nervous system). The sympathetic preganglionic neurons have their cell bodies in the thoracic and lumbar regions of the spinal cord and connect to the paravertebral chain of sympathetic ganglia. Innervate heart and blood vessels, sweat glands, viscera and the adrenal medulla. Most sympathetic neurons, but not all, use noradrenaline as a post-ganglionic neurotransmitter [GO]." [Wikipedia:Sympathetic_nervous_system]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Sympathetic nervous system" EXACT []
synonym: "sympathetic nervous system" EXACT []
synonym: "Sympathetic part of autonomic division of nervous system" EXACT []
synonym: "sympathetic part of autonomic division of nervous system" EXACT []
xref: EFO:0000893 ! sympathetic nervous system
xref: FMA:9906 ! Sympathetic nervous system
xref: GAID:710 ! sympathetic nervous system
xref: HOG:0000384 ! sympathetic nervous system
xref: MA:0000225 ! sympathetic nervous system
xref: MIAA:0000100 ! PNS - sympathetic
xref: NIF_GrossAnatomy:birnlex_2516 ! Sympathetic nervous system
xref: TAO:0001576 ! sympathetic nervous system
xref: ZFA:0001576 ! sympathetic nervous system
is_a: UBERON:0002410 ! autonomic nervous system
relationship: part_of UBERON:0002410 ! autonomic nervous system
xref: ncithesaurus:Sympathetic_Nervous_System ! Sympathetic Nervous System
xref: BTO:0001832 ! sympathetic nervous system

[Term]
id: UBERON:0000014
name: zone of skin
xref: FMA:86166 ! Zone of skin
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0002097 ! skin

[Term]
id: UBERON:0000015
name: anatomical boundary
def: "Non-material anatomical entity of one dimension, which forms a boundary of an anatomical surface or is a modulation of an anatomical surface." [CARO:MAH]
synonym: "anatomical line" EXACT []
xref: BILA:0000008
xref: CARO:0000008 ! anatomical line
xref: FMA:256502 ! Anatomical boundary
xref: HAO:0000008 ! anatomical line
is_a: UBERON:0000466 ! immaterial anatomical entity
disjoint_from: UBERON:0000464 ! anatomical space
xref: ZFA:0001689 ! anatomical line

[Term]
id: UBERON:0000016
name: endocrine pancreas
def: "The endocrine pancreas is made up of islet cells that produce insulin, glucagon and somatostatin[GO]. // The zebrafish endocrine pancreas is composed of small groups of islet cells that are distributed throughout the exocrine pancreas[ZFIN]. The islet cells produce insulin, glucagon and somatostatin." [GOC:GO, Wikipedia:Endocrine_pancreas]
subset: uberon_slim
synonym: "Endocrine pancreas" EXACT []
synonym: "endocrine pancreas" EXACT []
synonym: "Pars endocrina pancreatis" EXACT []
synonym: "pars endocrina pancreatis" EXACT []
xref: BTO:0000650
xref: FMA:16018 ! Endocrine pancreas
xref: HOG:0000049 ! endocrine pancreas
xref: MA:0001582 ! endocrine pancreas
xref: TAO:0001260 ! endocrine pancreas
xref: ZFA:0001260 ! endocrine pancreas
is_a: UBERON:0002075 ! viscus
relationship: part_of UBERON:0001264 ! pancreas
xref: ncithesaurus:Endocrine_Pancreas ! Endocrine Pancreas

[Term]
id: UBERON:0000017
name: exocrine pancreas
def: "The exocrine pancreas produces and store zymogens of digestive enzymes, such as chymotrypsinogen and trypsinogen in the acinar cells [GO] // The exocrine pancreas is composed of acinar epithelial cells and ductal epithelium that manufacture the proteolytic enzymes and bicarbonate required for digestion." [GOC:GO, Wikipedia:Exocrine_pancreas]
subset: uberon_slim
synonym: "Exocrine pancreas" EXACT []
synonym: "exocrine pancreas" EXACT []
synonym: "Pars exocrina pancreatis" EXACT []
synonym: "pars exocrina pancreatis" EXACT []
xref: BTO:0000434
xref: FMA:16017 ! Exocrine pancreas
xref: HOG:0000048 ! exocrine pancreas
xref: MA:0002415 ! exocrine pancreas
xref: TAO:0001249 ! exocrine pancreas
xref: XAO:0000137 ! exocrine pancreas
xref: ZFA:0001249 ! exocrine pancreas
is_a: UBERON:0002075 ! viscus
relationship: part_of UBERON:0001264 ! pancreas
relationship: part_of UBERON:0002330 ! exocrine system
xref: ncithesaurus:Exocrine_Pancreas ! Exocrine Pancreas

[Term]
id: UBERON:0000018
name: compound eye
def: "A light sensing organ composed of ommatidia" [FB:gg, Wikipedia:Compound_eye]
subset: uberon_slim
synonym: "adult compound eye" RELATED []
synonym: "insect eye" RELATED []
xref: FBbt:00004508 ! eye
xref: HAO:0000217 ! compound eye
is_a: UBERON:0000970 ! eye
relationship: has_part UBERON:0000971 ! ommatidium
xref: BTO:0001921 ! compound eye

[Term]
id: UBERON:0000019
name: camera-type eye
alt_id: UBERON:FMA_12513-MIAA_0000283-XAO_0000181
def: "GO: The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field. Organ with organ cavity which is connected to the optic nerve, allowing light to enter it and project onto a light-sensitive panel of cells, known as the retina, at the rear of the eye [FMA]." [FMA:12513, GO:0043010, Image:http\://genome.cshlp.org/content/14/8/1555/F1.large.jpg, Image:http\://www.pnas.org/content/94/6/2098/F1.large.jpg]
subset: uberon_slim
synonym: "Orbital part of face" RELATED []
synonym: "Orbital region" RELATED []
synonym: "vertebrate eye" EXACT []
xref: FMA:12513 ! Eyeball
xref: MA:0000261 ! eye
xref: TAO:0000107 ! eye
xref: XAO:0000179 ! eye
xref: ZFA:0000107 ! eye
is_a: UBERON:0000047 ! simple eye
relationship: part_of UBERON:0001456 ! face

[Term]
id: UBERON:0000020
name: sense organ
def: "An organ that is part of a sense organ system." [Wikipedia:Sense_organ]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "sensillum" NARROW [WBbt:0006929]
synonym: "sensor" RELATED []
synonym: "sensory organ" EXACT []
xref: BTO:0000202
xref: EHDAA:500 ! sensory organ
xref: FBbt:00005155 ! sense organ
xref: GAID:63 ! sense organ
xref: HAO:0000930 ! sense organ
xref: HOG:0001407 ! sensory organ
xref: WBbt:0006929 ! sensillum
is_a: UBERON:0000062 ! organ
intersection_of: UBERON:0000062 ! organ
intersection_of: part_of UBERON:0001032 ! sense organ system
relationship: part_of UBERON:0001032 ! sense organ system
xref: MA:0000017 ! sensory organ
xref: FMA:75259 ! Set of sense organs

[Term]
id: UBERON:0000021
name: cutaneous appendage
def: "Appendage that protrudes from the skin" []
subset: uberon_slim
is_a: UBERON:0000026 ! appendage
relationship: part_of UBERON:0002097 ! skin

[Term]
id: UBERON:0000022
name: feather
def: "." [Wikipedia:Feather]
subset: uberon_slim
xref: BTO:0000447
xref: GAID:1214 ! feather
xref: MAT:0000156 ! feather
xref: OpenCyc:Mx4rvVjW-5wpEbGdrcN5Y29ycA
is_a: UBERON:0000021 ! cutaneous appendage

[Term]
id: UBERON:0000023
name: wing
def: "Appendage that is used to produce lift for flight through the air." [Wikipedia:Wing]
comment: This class is not monophyletic. See also: GO:0007629
subset: uberon_slim
xref: EFO:0000885 ! wing
xref: GAID:1217 ! wing
xref: MAT:0000202 ! wing
xref: MIAA:0000202 ! wing
is_a: UBERON:0000475 ! organism subdivision
xref: BTO:0001463 ! wing

[Term]
id: UBERON:0000024
name: forelimb wing
def: "Forelimb that is used to produce lift for flight through the air." []
subset: uberon_slim
is_a: UBERON:0000023 ! wing
is_a: UBERON:0002102 ! forelimb

[Term]
id: UBERON:0000025
name: tube
def: "Epithelial and endothelial tubes transport gases, liquids and cells from one site to another and form the basic structure of many organs and tissues including lung and trachea, kidney, the mammary gland, the vascular system and the gastrointestinal and urinary-genital tracts. with tube shape and organization varying from the single-celled excretory organ in Caenorhabditis elegans to the branching trees of the mammalian kidney and insect tracheal system" [GO:0035295, PMID:12526790]
is_a: UBERON:0000061 ! anatomical structure
xref: ncithesaurus:Tube ! Tube

[Term]
id: UBERON:0000026
name: appendage
def: "Organ or organ part that is attached to the trunk of an organism. For example a limb[GO]." [GO:0048736, Wikipedia:Appendage]
subset: uberon_slim
xref: BILA:0000018
xref: EFO:0000799 ! appendage
xref: HAO:0000144 ! appendage
xref: MAT:0000023 ! appendage
xref: OpenCyc:Mx4rvViC-JwpEbGdrcN5Y29ycA
is_a: UBERON:0000475 ! organism subdivision
relationship: attached_to UBERON:0002100 ! trunk
xref: ncithesaurus:Appendage ! Appendage

[Term]
id: UBERON:0000027
name: hind digit
comment: This class was created automatically from a combination of ontologies
synonym: "hind digit" EXACT []
synonym: "hindlimb digit" RELATED []
xref: AAO:0000888 ! hind_digit
xref: XAO:0003035 ! hind digit
is_a: UBERON:0002544 ! digit

[Term]
id: UBERON:0000028
name: fore digit
def: "A digit of the forelimb." [UBERON:xp]
comment: This class was created automatically from a combination of ontologies
synonym: "fore digit" EXACT []
synonym: "forelimb digit" RELATED []
xref: AAO:0000857 ! fore_digit
xref: XAO:0003036 ! fore digit
is_a: UBERON:0002544 ! digit
intersection_of: UBERON:0002544 ! digit
intersection_of: part_of UBERON:0002102 ! forelimb

[Term]
id: UBERON:0000029
name: lymph node
def: "Oval or bean shaped bodies (1 - 30 mm in diameter) located along the lymphatic system. Lymph nodes are garrisons of B, T, and other immune cells. Lymph nodes are found all through the body, and act as filters or traps for foreign particles. They contain white blood cells that use oxygen to process. Thus they are important in the proper functioning of the immune system[WP]." [GAID:947, Wikipedia:Lymph_node]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
xref: BTO:0000784
xref: EFO:0000872 ! lymph node
xref: FMA:5034 ! Lymph node
xref: GAID:947 ! lymph node
xref: HOG:0001273 ! lymph node
xref: MA:0000139 ! lymph node
xref: MAT:0000442 ! lymph node
is_a: UBERON:0000064 ! organ part
relationship: continuous_with UBERON:0001473 ! lymphatic vessel
relationship: has_part UBERON:0002391 ! lymph
relationship: part_of UBERON:0002465 ! lymphoid system
xref: ncithesaurus:Lymph_Node ! Lymph Node

[Term]
id: UBERON:0000030
name: lamina propria
def: "A thin layer of loose connective tissue which lies beneath the epithelium and together with the epithelium constitutes the mucosa[WP]. The lamina propria contains capillaries and a central lacteal (lymph vessel) in the small intestine, as well as lymphoid tissue. Lamina propria also contains glands with the ducts opening on to the mucosal epithelium, that secrete mucus and serous secretions." [Wikipedia:Lamina_propria]
subset: uberon_slim
synonym: "lamina propria mucosa" EXACT []
synonym: "lamina propria mucosae" EXACT []
is_a: UBERON:0002384 ! connective tissue
relationship: adjacent_to UBERON:0000483 ! epithelium
relationship: part_of UBERON:0000344 ! mucosa
xref: ncithesaurus:Lamina_Propria ! Lamina Propria
xref: BTO:0002330 ! lamina propria

[Term]
id: UBERON:0000031
name: lamina propria of trachea
synonym: "trachea lamina propria" EXACT []
synonym: "tracheal lamina propria" EXACT []
xref: FMA:62517 ! Lamina propria
xref: MA:0001858 ! trachea lamina propria
is_a: UBERON:0000030 ! lamina propria
intersection_of: UBERON:0000030 ! lamina propria
intersection_of: part_of UBERON:0001005 ! trachea
relationship: part_of UBERON:0001005 ! trachea
xref: ncithesaurus:Trachea_Lamina_Propria ! Trachea Lamina Propria

[Term]
id: UBERON:0000032
name: cranial structure
def: "Bony structure in the head of the animal. Encompasses structures consisting of bone or sclerite." [Wikipedia:Cranium]
subset: uberon_slim
synonym: "cranium" RELATED []
synonym: "skull" RELATED []
xref: HAO:0000234 ! cranium
is_a: UBERON:0000475 ! organism subdivision
relationship: part_of UBERON:0000033 ! head

[Term]
id: UBERON:0000033
name: head
alt_id: UBERON:FBbt_00000004-FBbt_00003007-FMA_46565-FMA_7154-FMA_87596-MA_0000023-MA_0000316-MIAA_0000017-MIAA_0000149-MIAA_0000294-MIAA_0000340-WBbt_0005739-XAO_0003024-ZFA_0000737-ZFA_0001114
def: "The head is the anterior-most division of the body [GO]. Subdivision of skeletal system which consists of the skeleton of the head and its joints. // Cardinal body part, which consists of a maximal set of diverse subclasses of organ and organ part spatially associated with the skull, it is partially surrounded by skin of head. Examples: There is only one head. // anterior-most body region containing the pharynx. // Organism subdivision that is the part of the body consisting of the cranial and pharyngeal regions. // Skeletal system which is part of the skull, including the splanchnocranium, chondrocranium, and dermatocranium. // Organism subdivision which is the part of the body which consists of the cranial and pharygeal regions." [WB:rynl, Wikipedia:Head, ZFA:0001114, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "adult head" EXACT []
synonym: "chondrocranium" RELATED []
synonym: "cranial skeleton" RELATED []
synonym: "epicranial plate" RELATED []
synonym: "Head" EXACT []
synonym: "head tissue" RELATED []
xref: BILA:0000115
xref: BTO:0000282
xref: EHDAA:9184 ! head
xref: FBbt:00000004 ! head
xref: FMA:7154 ! Head
xref: GAID:61 ! head
xref: galen:Head
xref: HAO:0000397 ! head
xref: MA:0000023 ! head
xref: MAT:0000294 ! head
xref: MIAA:0000294 ! head
xref: NIF_GrossAnatomy:birnlex_1230 ! Head
xref: OpenCyc:Mx4rvVi6YJwpEbGdrcN5Y29ycA
xref: TAO:0001114 ! head
xref: WBbt:0005739 ! head
xref: XAO:0003024 ! head
xref: ZFA:0001114 ! head
is_a: UBERON:0000475 ! organism subdivision
xref: ncithesaurus:Head ! Head

[Term]
id: UBERON:0000035
name: primary ovarian follicle
synonym: "Folliculus ovaricus primarius" EXACT [FMA:18634]
synonym: "folliculus ovaricus primarius" EXACT []
synonym: "preantral follicle of ovary" EXACT []
synonym: "primary egg follicle" RELATED []
synonym: "primary follicle of ovary" EXACT [FMA:18634]
xref: FMA:18634 ! Primary follicle of ovary
is_a: UBERON:0001305 ! follicle of ovary

[Term]
id: UBERON:0000036
name: secondary ovarian follicle
synonym: "antral follicle of ovary" EXACT []
synonym: "Folliculus ovaricus secondarius" EXACT [FMA:18637]
synonym: "folliculus ovaricus secondarius" EXACT []
synonym: "secondary egg follicle" RELATED []
synonym: "secondary follicle of ovary" EXACT []
xref: FMA:18637 ! Secondary follicle of ovary
is_a: UBERON:0001305 ! follicle of ovary
relationship: develops_from UBERON:0000035 ! primary ovarian follicle

[Term]
id: UBERON:0000037
name: tertiary ovarian follicle
def: "." [Wikipedia:Graafian_follicle]
subset: uberon_slim
synonym: "Folliculus ovaricus tertiarius" EXACT [FMA:18641]
synonym: "folliculus ovaricus tertiarius" EXACT []
synonym: "Folliculus ovaricus tertiarius (vesiculous)" EXACT [FMA:18641]
synonym: "folliculus ovaricus tertiarius (vesiculous)" EXACT []
synonym: "Graafian follicle" EXACT []
synonym: "graafian follicle" EXACT []
synonym: "tertiary egg follicle" RELATED []
xref: FMA:18641 ! Tertiary follicle of ovary
is_a: UBERON:0001305 ! follicle of ovary
relationship: develops_from UBERON:0000036 ! secondary ovarian follicle
xref: ncithesaurus:Graafian_Follicle ! Graafian Follicle

[Term]
id: UBERON:0000038
name: follicular fluid
def: "The fluid surrounding the OVUM and GRANULOSA CELLS in the Graafian follicle ( OVARIAN FOLLICLE). The follicular fluid contains sex steroids, glycoprotein hormones, plasma proteins, mucopolysaccharides, and enzymes." [MESH:D015571, Wikipedia:Follicular_fluid]
comment: Follicular fluid is a liquid which fills the follicular antrum and surrounds the ovum in an ovarian follicle. This fluid is rich in hyaluronic acid.
subset: uberon_slim
synonym: "antral fluid, ovarian follicle" RELATED []
synonym: "liquor folliculi" RELATED []
is_a: UBERON:0000463 ! portion of organism substance
relationship: part_of UBERON:0001305 ! follicle of ovary
relationship: surrounded_by UBERON:0000039 ! follicular antrum
relationship: surrounds CL:0000025 ! egg

[Term]
id: UBERON:0000039
name: follicular antrum
def: "Region of ovarian follicle filled with follicular fluid." [http://en.wikipedia.org/wiki/Follicular_antrum, Wikipedia:Follicular_antrum]
subset: uberon_slim
is_a: UBERON:0000061 ! anatomical structure
relationship: part_of UBERON:0001305 ! follicle of ovary

[Term]
id: UBERON:0000040
name: Leydig's organ
def: "Along with the spleen and special tissue around the gonads, this structure produces red blood cells and it is nestled along the top and bottom of the esophagus. Found in elasmobranchs (sharks and rays) but with some exceptions. Leydig's organ can be quite large - a 1.6-kilogram (3.5-pound) one was reported from a 1.8-metre (6-foot) long Bluntnose Sixgill Shark (Hexanchus griseus)" [http://www.elasmo-research.org/education/topics/p_blood_cells.htm, Wikipedia:Leydig's_organ]
subset: uberon_slim
is_a: UBERON:0003103 ! compound organ

[Term]
id: UBERON:0000041
name: dermal denticle
def: "small outgrowths which cover the skin of many cartilaginous fish including sharks. They are similar in structure to teeth, and teeth may have evolved from denticle-like structures in primitive fish.[citation needed] The placoid scales in sharks are formed of dentine with dermal papillae located in the core. These scales develop from the dermal layer of the skin, which is in contrast to the epidermal development seen the in the elasmoid scales of tetrapods. The shape of denticle varies from species to species and can be used in identification. Studies have found that the denticles create tiny vortices that reduce drag to make swimming more efficient. Denticles also allow sharks to swim silently compared to other fish that generate considerable noise when they ply the water." [http://en.wikipedia.org/wiki/Dermal_denticle, Wikipedia:Dermal_denticle]
comment: TODO check dentin def
subset: uberon_slim
synonym: "placoid scale" EXACT []
is_a: UBERON:0000481 ! multi-tissue structure
relationship: has_part UBERON:0001751 ! dentine

[Term]
id: UBERON:0000042
name: serous membrane
def: "a smooth membrane consisting of a thin layer of cells which excrete serous fluid. Serous membranes line and enclose several body cavities, known as serous cavities, where they secrete a lubricating fluid which reduces friction from muscle movement. Serosa is not to be confused with adventitia, a connective tissue layer which binds together structures rather than reducing friction between them[WP]." [Wikipedia:Serosa, Wikipedia:Serous_membrane]
comment: TODO - add generic membrane parent?
subset: uberon_slim
synonym: "serosa" EXACT []
is_a: UBERON:0000061 ! anatomical structure
relationship: has_part UBERON:0001136 ! mesothelium
relationship: has_part UBERON:0002384 ! connective tissue
xref: FMA:45637 ! Serosa
xref: FMA:9581 ! Serous membrane
xref: ncithesaurus:Serosa ! Serosa

[Term]
id: UBERON:0000043
name: tendon
def: "A fibrous, strong, connective tissue that connects muscle to bone or integument and is capable of withstanding tension. Tendons are similar to ligaments except that ligaments join one bone to another. Tendons and muscles work together and can only exert a pulling force." [BTO:0000421, http://en.wikipedia.org/wiki/Tendon, OMD:connective+tissue, OMD:tendon, Wikipedia:Tendon]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Tendon" EXACT []
xref: BTO:0001356
xref: FMA:9721 ! Tendon
xref: GAID:276 ! tendon
xref: HAO:0000996 ! tendon
xref: HOG:0001286 ! tendon
xref: MA:0000115 ! tendon
xref: OpenCyc:Mx4rvVjefJwpEbGdrcN5Y29ycA
xref: XAO:0000173 ! tendon
is_a: UBERON:0002384 ! connective tissue
relationship: attached_to UBERON:0002385 ! muscle tissue
relationship: develops_from CL:0000057 ! fibroblast
xref: ncithesaurus:Tendon ! Tendon

[Term]
id: UBERON:0000044
name: dorsal root ganglion
def: "Trunk ganglion which is located adjacent to the spine on a dorsal root and contains the cell bodies of afferent sensory nerves" [Wikipedia:Dorsal_root_ganglion]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "dorsal root ganglia" RELATED []
synonym: "Dorsal root ganglion" EXACT []
synonym: "dorsal root ganglion" EXACT []
synonym: "DRG" RELATED []
synonym: "Ganglion spinalis" EXACT []
synonym: "ganglion spinalis" EXACT []
synonym: "Spinal ganglion" EXACT []
synonym: "spinal ganglion" RELATED []
xref: BTO:0001264
xref: EFO:0000900 ! dorsal root ganglion
xref: EHDAA:2899 ! dorsal root ganglion
xref: FMA:5888 ! Spinal ganglion
xref: HOG:0000222 ! dorsal root ganglion
xref: MA:0000232 ! dorsal root ganglion
xref: MAT:0000162 ! dorsal root ganglion
xref: MIAA:0000162 ! dorsal root ganglion
xref: NIF_GrossAnatomy:birnlex_2596 ! Dorsal root ganglion
xref: TAO:0000200 ! dorsal root ganglion
xref: XAO:0000210 ! spinal ganglion
xref: ZFA:0000200 ! dorsal root ganglion
is_a: UBERON:0001800 ! sensory ganglion
intersection_of: UBERON:0000045 ! ganglion
intersection_of: part_of UBERON:0002261 ! dorsal root
relationship: develops_from UBERON:0003083 ! trunk neural crest
relationship: part_of UBERON:0002261 ! dorsal root
xref: ncithesaurus:Dorsal_Root_Ganglion ! Dorsal Root Ganglion

[Term]
id: UBERON:0000045
name: ganglion
alt_id: UBERON:FBbt_00005137-FMA_5884-FMA_5888-MA_0000232-MA_0002406-MIAA_0000162-MIAA_0000207-MIAA_0000343-WBbt_0005189-XAO_0000209-XAO_0000210-ZFA_0000190-ZFA_0000200
def: "Any of a number of aggregations of neurons, glial cells and their processes, surrounded by a glial cell and connective tissue sheath (plural: ganglia). // Subdivision of neural tree (organ) which primarily consists of cell bodies of neurons located outside the neuraxis (brain and spinal cord); together with a nucleus and its associated nerve, it constitutes a neural tree (organ). Examples: spinal ganglion, trigeminal ganglion, superior cervical ganglion, celiac ganglion, inferior hypogastric (pelvic) ganglion. // a cluster of nerve cells and associated glial cells (nuclear location) // Portion of tissue that contains cell bodies of neurons and is located outside the central nervous system. // Structures containing a collection of nerve cell bodies. (Source: BioGlossary, www.Biology-Text.com) //" [http://flybrain.uni-freiburg.de/Flybrain/html/terms/terms.html, NLM:ganglion, WB:rynl, Wikipedia:Ganglion, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "ganglia" RELATED []
synonym: "Ganglion" EXACT []
synonym: "invertebrate ganglion" EXACT []
xref: BTO:0000497
xref: EFO:0000890 ! invertebrate ganglion
xref: EFO:0000899 ! ganglion
xref: EHDAA:2897 ! ganglion
xref: EHDAA:4662 ! ganglion
xref: EHDAA:5621 ! ganglion
xref: EHDAA:918 ! ganglion
xref: FBbt:00005137 ! ganglion
xref: FMA:5884 ! Ganglion
xref: HOG:0000156 ! ganglion
xref: MA:0002406 ! ganglion
xref: MAT:0000207 ! invertebrate ganglion
xref: MAT:0000343 ! ganglion
xref: MIAA:0000207 ! invertebrate ganglion
xref: MIAA:0000343 ! ganglion
xref: NIF_GrossAnatomy:birnlex_2596 ! Dorsal root ganglion
xref: TAO:0000190 ! ganglion
xref: WBbt:0005189 ! ganglion
xref: XAO:0000209 ! ganglion
xref: ZFA:0000190 ! ganglion
is_a: UBERON:0000479 ! portion of tissue
relationship: part_of UBERON:0001016 ! nervous system
xref: ncithesaurus:Ganglion ! Ganglion

[Term]
id: UBERON:0000046
name: stemma
def: "eye-spots which may be set into a pit to reduce the angles of light that enters and affects the eyespot, to allow the organism to deduce the angle of incoming light" [Wikipedia:Eye#Pit_eyes, Wikipedia:Stemma]
subset: uberon_slim
synonym: "pit eye" EXACT [Wikipedia:Eye#Pit_eyes]
is_a: UBERON:0000047 ! simple eye

[Term]
id: UBERON:0000047
name: simple eye
def: "An eye with one concave chamber. Note that \"simple\" does not imply a reduced level of complexity or acuity." [Wikipedia:Eye#Simple_eyes]
subset: uberon_slim
is_a: UBERON:0000970 ! eye

[Term]
id: UBERON:0000048
name: pinhole eye
def: "Simple eye that has a small aperture (which may be adjustable) and deep pit. It is only found in the nautiloids." [DOI:10.1146/annurev.ne.15.030192.000245, Wikipedia:Pinhole_eye]
subset: uberon_slim
is_a: UBERON:0000047 ! simple eye

[Term]
id: UBERON:0000049
name: spherical lensed eye
def: "simple eye that consists of a lens of one refractive index" [Wikipepedia:Eye#Spherical_lensed_eye]
is_a: UBERON:0000047 ! simple eye

[Term]
id: UBERON:0000050
name: simple eye with multiple lenses
def: "simple eye that has two or more lenses. Some marine organisms bear more than one lens; for instance the copeopod Pontella has three. The outer has a parabolic surface, countering the effects of spherical aberration while allowing a sharp image to be formed. Copilla's eyes have two lenses, which move in and out like a telescope" [Wikipedia:Eye#Multiple_lenses]
subset: uberon_slim
is_a: UBERON:0000047 ! simple eye
relationship: has_part UBERON:0000965 ! lens

[Term]
id: UBERON:0000051
name: fornix of vagina
def: "." [Wikipedia:Fornix_vaginae]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "fornix" BROAD []
synonym: "vaginal fornix" EXACT []
xref: FMA:19985 ! Fornix of vagina
is_a: UBERON:0002553 ! anatomical cavity
relationship: part_of UBERON:0000996 ! vagina
xref: ncithesaurus:Vaginal_Fornix ! Vaginal Fornix

[Term]
id: UBERON:0000052
name: fornix of brain
def: "." [Wikipedia:Fornix_of_brain]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "brain fornix" EXACT []
synonym: "fornix" BROAD []
xref: MA:0002747 ! fornix
xref: NIF_GrossAnatomy:birnlex_705 ! Fornix
is_a: UBERON:0002437 ! cerebral white matter

[Term]
id: UBERON:0000053
name: macula lutea
def: "Oval yellow spot near the center of the retina of the human eye. It has a diameter of around 5 mm and is often histologically defined as having two or more layers of ganglion cells. Near its center is the fovea, a small pit that contains the largest concentration of cone cells in the eye and is responsible for central vision, and also contains the parafovea and perifovea." [Wikipedia:Macula_lutea]
subset: uberon_slim
synonym: "Macula" EXACT []
synonym: "macula" EXACT []
synonym: "Macula lutea" EXACT []
synonym: "maculae" RELATED []
xref: FMA:58637 ! Macula lutea
xref: GAID:909 ! macula lutea
xref: MA:0001306 ! macula
xref: NIF_GrossAnatomy:birnlex_2540 ! Macula
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0000966 ! retina
xref: ncithesaurus:Macula ! Macula
xref: BTO:0003015 ! macula lutea

[Term]
id: UBERON:0000054
name: macula
def: "Patches of thickened, pseudostratified epithelium of the inner ear, consisting of regular arrays of sensory hair cells interspersed with supporting cells. Each patch has its own charcteristic shape and polarity pattern." [ZFIN:curator]
subset: uberon_slim
synonym: "Macula" EXACT []
synonym: "macula" EXACT []
synonym: "maculae" RELATED []
xref: TAO:0000386 ! macula
xref: ZFA:0000386 ! macula
is_a: UBERON:0000479 ! portion of tissue
relationship: part_of UBERON:0001846 ! internal ear
xref: ncithesaurus:Macula ! Macula

[Term]
id: UBERON:0000055
name: vessel
def: "A tubular structure that contains, conveys body fluid, suchas blood or lymph." [UBERON:cjm]
is_a: UBERON:0000061 ! anatomical structure

[Term]
id: UBERON:0000056
name: ureter
def: "The ureter is one of a pair of thick-walled tubes that transports urine from the kidney pelvis to the urinary bladder[GO]. Muscular duct that propels urine from the kidneys to the urinary bladder, or related organs. In humans, organ with organ cavity which connects the renal sinus to the urinary bladder. Examples: There are only two ureters, the right and the left ureters." [Wikipedia:Ureter]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
xref: BTO:0001409
xref: EFO:0000930 ! ureter
xref: EHDAA:9341 ! ureter
xref: FBbt:00005793 ! ureter
xref: FMA:9704 ! Ureter
xref: GAID:438 ! ureter
xref: HOG:0000605 ! ureter
xref: MA:0000378 ! ureter
xref: MAT:0000120 ! ureter
xref: MIAA:0000120 ! ureter
xref: ncithesaurus:Ureter
xref: OpenCyc:Mx4rvhmm6JwpEbGdrcN5Y29ycA
xref: WBbt:0005777 ! excretory duct
xref: XAO:0000144 ! ureter
is_a: UBERON:0000062 ! organ
relationship: continuous_with UBERON:0001255 ! urinary bladder
relationship: continuous_with UBERON:0002113 ! kidney

[Term]
id: UBERON:0000057
name: urethra
def: "Organ with organ cavity which connects the cavity of the urinary bladder to the exterior. Examples: There is only one urethra." [Wikipedia:Urethra]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
xref: FMA:19667 ! Urethra
xref: GAID:390 ! urethra
xref: HOG:0001264 ! urethra
xref: MA:0000379 ! urethra
xref: MAT:0000121 ! urethra
xref: MIAA:0000121 ! urethra
xref: OpenCyc:Mx4rvVjkypwpEbGdrcN5Y29ycA
xref: WBbt:0005777 ! excretory duct
xref: XAO:0000153 ! urethra
is_a: UBERON:0000062 ! organ
relationship: continuous_with UBERON:0001255 ! urinary bladder
xref: ncithesaurus:Urethra ! Urethra
xref: BTO:0001426 ! urethra

[Term]
id: UBERON:0000058
name: duct
def: "A tube shaped portion of tissue lined with epithelial cells that collects secretions and routes them to their destination[ZFA]." [Wikipedia:Duct_(anatomy), ZFA:0005171]
xref: FMA:30320 ! Duct
xref: galen:Duct
xref: HAO:0000282 ! duct
xref: ZFA:0005171 ! duct
is_a: UBERON:0000063 ! organ segment
xref: ncithesaurus:Duct ! Duct

[Term]
id: UBERON:0000059
name: large intestine
def: "The large intestine consists of the cecum and colon[WP]. Organ with organ cavity which is continuous proximally with the small intestine and distally with the anal canal. Examples: There is only large intestine [FMA]." [Wikipedia:Large_intestine_(anatomy)]
xref: BTO:0000706
xref: EFO:0000840 ! large intestine
xref: FMA:7201 ! Large intestine
xref: galen:LargeIntestine
xref: HOG:0000054 ! large intestine
xref: MA:0000333 ! large intestine
xref: MIAA:0000046 ! large intestine
xref: ncithesaurus:Large_Intestine
xref: OpenCyc:Mx4rvVkF5pwpEbGdrcN5Y29ycA
xref: XAO:0000131 ! large intestine
is_a: UBERON:0000061 ! anatomical structure
relationship: part_of UBERON:0001555 ! gut

[Term]
id: UBERON:0000060
name: anatomical wall
def: "anatomical structure with bona-fide boundary that functions as a barrier." [UBERON:cjm]
synonym: "wall" EXACT []
is_a: UBERON:0000061 ! anatomical structure
xref: ncithesaurus:Wall ! Wall

[Term]
id: UBERON:0000061
name: anatomical structure
alt_id: UBERON:CARO_0000003-CARO_0000024-FBbt_00000001-FBbt_00007001-FMA_67135-FMA_67498-WBbt_0003760-WBbt_0007833-XAO_0003000-XAO_0003041-ZFA_0000037-ZFA_0000496-ZFA_0001094
def: "Material anatomical entity that has inherent 3D shape and is generated by coordinated expression of the organism's own genome." [CARO:0000003]
comment: This class was created automatically from a combination of ontologies
synonym: "Biological structure" EXACT []
synonym: "biological structure" EXACT []
xref: BILA:0000003
xref: CARO:0000003 ! anatomical structure
xref: FBbt:00007001 ! anatomical structure
xref: FMA:67135 ! Anatomical structure
xref: HAO:0000003 ! anatomical structure
xref: TAO:0000037 ! anatomical structure
xref: XAO:0003000 ! anatomical structure
xref: ZFA:0000037 ! anatomical structure
is_a: UBERON:0000465 ! material anatomical entity

[Term]
id: UBERON:0000062
name: organ
def: "Anatomical structure that performs a specific function or group of functions [WP]. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions[GO]." [Wikipedia:Organ_(anatomy)]
comment: More specific definition from CARO -- Anatomical structure that has as its parts two or more multi-tissue structures of at least two different types and which through specific morphogenetic processes forms a single distinct structural unit demarcated by bona fide boundaries from other distinct anatomical structures of different types.
xref: BILA:0000053
xref: CARO:0000024 ! compound organ
xref: EFO:0000634
xref: FMA:67498 ! Organ
xref: HOG:0000671 ! organism
xref: OpenCyc:Mx4rwP3iWpwpEbGdrcN5Y29ycA
xref: XAO:0003041 ! compound organ
xref: ZFA:0000496 ! compound organ
is_a: UBERON:0000061 ! anatomical structure
relationship: part_of UBERON:0000467 ! anatomical system
xref: ncithesaurus:Organ ! Organ

[Term]
id: UBERON:0000063
name: organ segment
def: "Organ region with one or more fixed or anchored fiat boundaries. Examples: artery, trunk of nerve, cervical part of esophagus, pelvic part of vagina, horn of thyroid cartilage, anterior segment of eyeball[FMA]." [FMA:86140]
xref: FMA:86140 ! Organ segment
is_a: UBERON:0000064 ! organ part

[Term]
id: UBERON:0000064
name: organ part
xref: EFO:0000635 ! organism part
xref: FMA:82472 ! Cardinal organ part
is_a: UBERON:0000061 ! anatomical structure
disjoint_from: UBERON:0000062 ! organ
relationship: part_of UBERON:0000062 ! organ

[Term]
id: UBERON:0000065
name: respiratory tract
def: "anatomical structure that is part of the respiratory system. In mammals consists of upper and lower tracts" [UBERON:cjm]
xref: HOG:0000393 ! respiratory tract
is_a: UBERON:0000061 ! anatomical structure
relationship: develops_from UBERON:0000925 ! endoderm
relationship: part_of UBERON:0001004 ! respiratory system

[Term]
id: UBERON:0000066
name: fully formed stage
def: "The stage of development at which the animal is fully formed, including immaturity and maturity. Includes both juvenile stage, and adult stage. " [UBERON:cjm]
synonym: "fully formed animal stage" EXACT []
synonym: "juvenile-adult stage" EXACT []
synonym: "adult stage" BROAD []
xref: FBdv:00005369
xref: XAO:1000009 ! adult
is_a: UBERON:0000092 ! post-embryonic stage
relationship: preceded_by UBERON:0000111 ! organogenesis stage

[Term]
id: UBERON:0000067
name: embryo stage part
def: "A stage that is part of the embryo stage." [UBERON:cjm]
synonym: "embryonic stage" EXACT []
xref: XAO:1000012 ! embryonic stage
is_a: UBERON:0000105 ! life cycle stage
intersection_of: UBERON:0000105 ! life cycle stage
intersection_of: part_of UBERON:0000068 ! embryo stage
relationship: part_of UBERON:0000068 ! embryo stage
xref: FBdv:00005289 ! embryonic stage

[Term]
id: UBERON:0000068
name: embryo stage
def: "A life cycle stage that starts with fertilization and ends with the fully formed embryo." []
synonym: "embryogenesis" RELATED []
is_a: UBERON:0000105 ! life cycle stage
relationship: coincides_with GO:0009790
relationship: part_of UBERON:0000104 ! life cycle

[Term]
id: UBERON:0000069
name: larval stage
synonym: "larva stage" EXACT []
xref: FBdv:00005336
is_a: UBERON:0000092 ! post-embryonic stage
relationship: coincides_with GO:0002164
relationship: directly_preceded_by UBERON:0000068 ! embryo stage

[Term]
id: UBERON:0000070
name: pupal stage
synonym: "pupa stage" EXACT []
xref: FBdv:00005349
is_a: UBERON:0000092 ! post-embryonic stage
relationship: coincides_with GO:0035209
relationship: directly_preceded_by UBERON:0000069 ! larval stage

[Term]
id: UBERON:0000071
name: death stage
def: "End of the life of an organism." [XAO:0000437]
synonym: "death" EXACT []
xref: XAO:0000437 ! death
is_a: UBERON:0000105 ! life cycle stage
relationship: coincides_with GO:0016265
relationship: finishes UBERON:0000104 ! life cycle
relationship: part_of UBERON:0000104 ! life cycle
xref: ncithesaurus:Death ! Death

[Term]
id: UBERON:0000072
name: segment of respiratory tract
xref: MA:0000434 ! respiratory tract
is_a: UBERON:0000061 ! anatomical structure
relationship: part_of UBERON:0000065 ! respiratory tract

[Term]
id: UBERON:0000073
name: regional part of nervous system
synonym: "neural segment" EXACT []
synonym: "neuromere" EXACT []
xref: FBbt:00005140 ! neuromere
xref: TAO:0001328 ! neuromere
xref: ZFA:0001328 ! neuromere
is_a: UBERON:0000063 ! organ segment
created_by: Melissa Haendel
creation_date: 2009-06-18T09:00:04Z

[Term]
id: UBERON:0000074
name: renal glomerulus
synonym: "glomerular tuft " RELATED []
synonym: "renal corpuscle " RELATED []
synonym: "glomerulus" NARROW []
xref: FMA:15624 ! Glomerulus
xref: MA:0001657 ! glomerulus
xref: XAO:0000146 ! glomerulus
xref: ZFA:0001288 ! renal glomerulus
xref: BTO:0000530 ! renal glomerulus
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001230 ! glomerular capsule
created_by: Melissa Haendel
creation_date: 2009-06-18T09:26:37Z

[Term]
id: UBERON:0000075
name: subdivision of skeleton
synonym: "skeleton part" RELATED []
xref: FMA:23879 ! Subdivision of skeleton (in vivo)
is_a: UBERON:0000467 ! anatomical system
disjoint_from: UBERON:0000949 ! endocrine system
disjoint_from: UBERON:0000990 ! reproductive system
disjoint_from: UBERON:0001004 ! respiratory system
disjoint_from: UBERON:0001007 ! digestive system
disjoint_from: UBERON:0001008 ! urinary system
disjoint_from: UBERON:0001009 ! circulatory system
disjoint_from: UBERON:0001016 ! nervous system
disjoint_from: UBERON:0001032 ! sense organ system
disjoint_from: UBERON:0001033 ! gustatory system
disjoint_from: UBERON:0001434 ! skeleton
disjoint_from: UBERON:0002204 ! musculoskeletal system
disjoint_from: UBERON:0002294 ! biliary system
disjoint_from: UBERON:0002330 ! exocrine system
disjoint_from: UBERON:0002390 ! hematopoietic system
disjoint_from: UBERON:0002405 ! immune system
disjoint_from: UBERON:0002416 ! integumental system
disjoint_from: UBERON:0002423 ! hepatobiliary system
relationship: part_of UBERON:0001434 ! skeleton
created_by: cjm
creation_date: 2009-07-30T03:53:53Z

[Term]
id: UBERON:0000076
name: external ectoderm
def: "." [Wikipedia:External_ectoderm]
comment: In vertebrates, the ectoderm has three parts: external ectoderm (also known as surface ectoderm), the neurectoderm (neural crest, and neural tube).
synonym: "surface ectoderm" EXACT []
is_a: UBERON:0000923 ! germ layer
relationship: part_of UBERON:0000924 ! ectoderm
xref: FMA:87656 ! Surface ectoderm
xref: ncithesaurus:Surface_Ectoderm ! Surface Ectoderm

[Term]
id: UBERON:0000077
name: mixed endoderm/mesoderm-derived structure
def: "An anatomical structure that develops from the endoderm." [UBERON:cjm]
comment: Grouping term for query purposes
is_a: UBERON:0000061 ! anatomical structure
intersection_of: UBERON:0000061 ! anatomical structure
intersection_of: develops_from UBERON:0000925 ! endoderm
intersection_of: develops_from UBERON:0000926 ! mesoderm

[Term]
id: UBERON:0000078
name: mixed ectoderm/mesoderm/endoderm-derived structure
def: "An anatomical structure that develops from the endoderm." [UBERON:cjm]
comment: Grouping term for query purposesnGrouping term for query purposes
is_a: UBERON:0000077 ! mixed endoderm/mesoderm-derived structure
intersection_of: UBERON:0000061 ! anatomical structure
intersection_of: develops_from UBERON:0000924 ! ectoderm
intersection_of: develops_from UBERON:0000925 ! endoderm
intersection_of: develops_from UBERON:0000926 ! mesoderm

[Term]
id: UBERON:0000079
name: male reproductive system
synonym: "male genitalia" NARROW []
xref: BTO:0000082
xref: FBbt:00004828 ! male genitalia
xref: HAO:0000505 ! male genitalia
xref: HOG:0000725 ! male reproductive system
xref: OpenCyc:Mx4rvViCepwpEbGdrcN5Y29ycA
is_a: UBERON:0000990 ! reproductive system
intersection_of: UBERON:0000990 ! reproductive system
intersection_of: part_of UBERON:0003101 ! male organism
disjoint_from: UBERON:0000474 ! female reproductive system
relationship: part_of UBERON:0003101 ! male organism
xref: MA:0000396 ! male reproductive system
xref: ncithesaurus:Male_Reproductive_System ! Male Reproductive System

[Term]
id: UBERON:0000080
name: mesonephros
def: "In mammals, the mesonephros is the second of the three embryonic kidneys to be established and exists only transiently. In lower vertebrates such as fish and amphibia, the mesonephros will form the mature kidney[GO]. One of three excretory organs that develop in vertebrates. It serves as the main excretory organ of aquatic vertebrates and as a temporary kidney in higher vertebrates. composed of the mesonephric duct (also called the Wolffian duct), mesonephric tubules, and associated capillary tufts. A single tubule and its associated capillary tuft is called a mesonephric excretory unit; these units are similar in structure and function to nephrons of the adult kidney. The mesonephros is derived from intermediate mesoderm in the vertebrate embryo." [GO:0001823, Wikipedia:Mesonephros]
xref: EFO:0000928 ! mesonephros
xref: FMA:72171 ! Mesonephros
xref: HOG:0000038 ! mesonephros
xref: ZFA:0000529 ! kidney
is_a: UBERON:0002113 ! kidney
relationship: develops_from UBERON:0002120 ! pronephros
xref: ncithesaurus:Mesonephros ! Mesonephros

[Term]
id: UBERON:0000081
name: metanephros
def: "In mammals, the metanephros is the excretory organ of the fetus, which develops into the mature kidney and is formed from the rear portion of the nephrogenic cord[GO]. During the fifth week of gestation, the mesonephric duct develops an outpouching, the ureteric bud, near its attachment to the cloaca. This bud, also called the metanephrogenic diverticulum, grows posteriorly and towards the head of the embryo. The elongated stalk of the ureteric bud, the metanephric duct, later forms the ureter. As the cranial end of the bud extends into the intermediate mesoderm, it undergoes a series of branchings to form the collecting duct system of the kidney. It also forms the major and minor calyces and the renal pelvis." [GO:0001656, Wikipedia:Metanephros#Metanephros]
xref: FMA:72172 ! Metanephros
xref: HOG:0000039 ! metanephros
is_a: UBERON:0002113 ! kidney
relationship: develops_from UBERON:0000080 ! mesonephros
xref: ncithesaurus:Metanephros ! Metanephros

[Term]
id: UBERON:0000082
name: adult mammalian kidney
is_a: UBERON:0002113 ! kidney
relationship: develops_from UBERON:0000081 ! metanephros
relationship: develops_from UBERON:0000084 ! ureteric bud

[Term]
id: UBERON:0000083
name: mesonephric tubule
def: "Genital ridge that is next to the mesonephros." [Wikipedia:Mesonephric_tubules]
xref: HOG:0000500 ! mesonephric tubule
is_a: UBERON:0000061 ! anatomical structure
relationship: part_of UBERON:0000080 ! mesonephros

[Term]
id: UBERON:0000084
name: ureteric bud
def: "a protrusion from the mesonephric duct during the development of the urinary and reproductive organs. It later develops into the adult kidney, except for the nephrons, which, in contrast, originate from the metanephric blastema." [Wikipedia:Ureteric_bud]
synonym: "metanephric diverticulum" RELATED []
xref: HOG:0000541 ! ureteric bud
is_a: UBERON:0000061 ! anatomical structure
relationship: part_of UBERON:0003074 ! mesonephric duct
xref: BTO:0001646 ! ureteric bud

[Term]
id: UBERON:0000085
name: morula
def: "An embryo at an early stage of embryonic development, consisting of cells (called blastomeres) in a solid ball contained within the zona pellucida." [Wikipedia:Morula]
is_a: UBERON:0000922 ! embryo
relationship: existence_starts_and_ends_during UBERON:0000108 ! blastula stage
relationship: has_part CL:0000353 ! blastoderm cell
relationship: surrounded_by UBERON:0000086 ! zona pellucida
xref: ncithesaurus:Morula ! Morula
xref: BTO:0001508 ! morula

[Term]
id: UBERON:0000086
name: zona pellucida
def: "A glycoprotein membrane surrounding the plasma membrane of an oocyte. It is a vital constitutive part of the latter, external but not extraneous to it. The zona pellucida first appears in multilaminar primary oocytes." [Wikipedia:Zona_pellucida]
synonym: "vitelline membrane" RELATED []
xref: EHDAA:31 ! zona pellucida
xref: EHDAA:62 ! zona pellucida
xref: GAID:410 ! zona pellucida
xref: MA:0001715 ! zona pellucida
is_a: UBERON:0000061 ! anatomical structure
relationship: surrounds CL:0000023 ! oocyte
xref: FMA:18674 ! Zona pellucida
xref: ncithesaurus:Zona_Pellucida ! Zona Pellucida
xref: BTO:0003135 ! zona pellucida

[Term]
id: UBERON:0000087
name: inner cell mass
def: "Mass of cells inside the primordial embryo that will eventually give rise to the definitive structures of the fetus. This structure forms in the earliest steps of development, before implantation into the endometrium of the uterus has occurred. The ICM lies within the blastocoele (more correctly termed \"blastocyst cavity\", as it is not strictly homologous to the blastocoele of anamniote vertebrates) and is entirely surrounded by the single layer of cells called trophoblast." [Wikipedia:Inner_cell_mass]
synonym: "embryoblast" RELATED []
synonym: "pluriblast" RELATED []
xref: EFO:0000547
xref: HOG:0000742 ! inner cell mass
is_a: UBERON:0002050 ! embryonic structure
relationship: surrounded_by UBERON:0000088 ! trophoblast
xref: FMA:86557 ! Inner cell mass
xref: ncithesaurus:Inner_Cell_Mass ! Inner Cell Mass

[Term]
id: UBERON:0000088
name: trophoblast
def: "Aggregate of cells forming the outer layer of a blastocyst, which provide nutrients to the embryo and develop into a large part of the placenta. They are formed during the first stage of pregnancy and are the first cells to differentiate from the fertilized egg." [Wikipedia:Trophoblast]
synonym: "trophoblast layer" RELATED [MP:0005031]
xref: BTO:0001079
is_a: UBERON:0002050 ! embryonic structure
xref: FMA:83029 ! Trophoblast

[Term]
id: UBERON:0000089
name: hypoblast
def: "The inner of the two layers of the blastoderm that forms during gastrulation and give rise to the definitive mesoderm and endoderm. <a href='http://zfin.org/cgi-bin/ZFIN_jump?record=ZDB-PUB-961014-576'>Kimmel et al, 1995.</a>" [Wikipedia:Hypodermis, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "hypoblast" EXACT []
synonym: "mesendoderm" RELATED []
xref: AAO:0000229 ! hypoblast
xref: HOG:0001222 ! hypoblast
xref: MAT:0000418 ! hypoblast
xref: MIAA:0000418 ! hypoblast
xref: TAO:0000117 ! hypoblast
xref: XAO:0003044 ! endomesoderm
xref: ZFA:0000117 ! hypoblast
is_a: UBERON:0002050 ! embryonic structure
relationship: adjacent_to UBERON:0002532 ! epiblast
relationship: part_of UBERON:0000091 ! bilaminar disc
xref: ncithesaurus:Hypoblast ! Hypoblast

[Term]
id: UBERON:0000090
name: blastocele
def: "fluid-filled central region of a blastocyst. A blastocoele forms during embryogenesis when a zygote (a fertilized ovum) divides into many cells through mitosis." [Wikipedia:Blastocele]
synonym: "blastocyst cavity" RELATED []
synonym: "cleavage cavity" EXACT []
synonym: "segmentation cavity" EXACT []
is_a: UBERON:0002553 ! anatomical cavity
relationship: surrounded_by UBERON:0002532 ! epiblast

[Term]
id: UBERON:0000091
name: bilaminar disc
def: "the epiblast and the hypoblast, evolved from the embryoblast" [Wikipedia:Bilaminar_disc]
is_a: UBERON:0002050 ! embryonic structure
relationship: develops_from UBERON:0000087 ! inner cell mass

[Term]
id: UBERON:0000092
name: post-embryonic stage
def: "stage succeeding embryo, including mature structure" [UBERON:cjm]
is_a: UBERON:0000105 ! life cycle stage
disjoint_from: UBERON:0000068 ! embryo stage
relationship: part_of UBERON:0000104 ! life cycle
relationship: coincides_with GO:0009791
relationship: preceded_by UBERON:0000068 ! embryo stage

[Term]
id: UBERON:0000093
name: sulcus
def: "a depression or fissure in the surface of an organ." [Wikipedia:Sulcus_(anatomy)]
is_a: UBERON:0000464 ! anatomical space
created_by: cjm
creation_date: 2009-04-09T06:23:22Z

[Term]
id: UBERON:0000094
name: membrane organ
def: "Nonparenchymatous organ that primarily consists of dense connective tissue organized into a sheet which interconnects two or more organs, separates two or more body spaces from one another, or surrounds an organ or body part. Examples: interosseous membrane of forearm, obturator membrane, tympanic membrane, fibrous pericardium, fascia lata, dura mater. [FMA]" [FMA:7145]
synonym: "membrane of organ" EXACT []
xref: FMA:7145 ! Membrane organ
is_a: UBERON:0000062 ! organ
created_by: cjm
creation_date: 2009-07-30T05:19:13Z

[Term]
id: UBERON:0000095
name: cardiac neural crest
def: "portion of neural crest that develops from the dorsal neural tube. It overlaps the vagal neural crest and migrates to populate the pharyngeal arches 3, 4 and 6 (producing structures in the head) and to the heart, forming connective tissue that separates the great vessels of the heart. [Wikipedia]" [Wikipedia:Cardiac_neural_crest]
is_a: UBERON:0000479 ! portion of tissue
created_by: cjm
creation_date: 2009-07-30T07:57:38Z
xref: ZFA:0001648 ! cardiac neural crest

[Term]
id: UBERON:0000100
name: blastopore
def: "Structure around the opening into the archenteron during the embryonic stages of an organism. The distinction between protostomes and deuterostomes is based on the direction in which the mouth (stoma) develops in relation to the blastopore." [Wikipedia:Blastopore]
xref: XAO:0000208 ! blastopore
is_a: UBERON:0002050 ! embryonic structure
xref: BTO:0001695 ! blastopore

[Term]
id: UBERON:0000101
name: lobe of lung
def: "A lung lobe is one of the rounded projections that compose the lung[GO]." [GOC:GO]
synonym: "lung lobe" EXACT []
synonym: "pulminory lobe" EXACT []
xref: FMA:7311 ! Lobe of lung
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0002048 ! lung
xref: ncithesaurus:Lung_Lobe ! Lung Lobe

[Term]
id: UBERON:0000102
name: lung vasculature
def: "The lung vasculature is composed of the tubule structures that carry blood or lymph in the lungs[GO]." [GOC:GO]
is_a: UBERON:0002049 ! vasculature
intersection_of: UBERON:0002049 ! vasculature
intersection_of: part_of UBERON:0002048 ! lung
xref: FMA:73750 ! Vasculature of lung

[Term]
id: UBERON:0000103
name: life cycle stage boundary
def: "Instant starting or ending a life cycle stage. These can be arbitrary/fiat." [UBERON:cjm]
synonym: "life cycle stage transition event" EXACT []
synonym: "life cycle stage transition instant" EXACT []
xref: span:ProcessBoundary
is_a: UBERON:0000000 ! processual entity
disjoint_from: UBERON:0000105 ! life cycle stage

[Term]
id: UBERON:0000104
name: life cycle
def: "An entire span of an organism's life, commencing with the zygote stage and ending in the death of the organism." [UBERON:cjm]
synonym: "life" EXACT []
synonym: "lifespan" EXACT []
xref: FBdv_root:00000000
is_a: UBERON:0000105 ! life cycle stage
xref: ncithesaurus:Life ! Life

[Term]
id: UBERON:0000105
name: life cycle stage
def: "A spatiotemporal region encompassing some part of the life cycle of an organism." [UBERON:cjm]
synonym: "developmental stage" EXACT []
xref: BILS:0000105
xref: EFO:0000399
xref: XAO:1000000 ! Xenopus developmental stage
xref: ZFS:0100000 ! zebrafish stage
is_a: UBERON:0000000 ! processual entity
relationship: has_end UBERON:0000103 ! life cycle stage boundary
relationship: has_start UBERON:0000103 ! life cycle stage boundary
xref: ncithesaurus:Developmental_Stage ! Developmental Stage

[Term]
id: UBERON:0000106
name: zygote stage
synonym: "one cell stage" RELATED []
xref: BILS:0000106
is_a: UBERON:0000105 ! life cycle stage
relationship: part_of UBERON:0000068 ! embryo stage
relationship: starts UBERON:0000104 ! life cycle

[Term]
id: UBERON:0000107
name: cleavage stage
def: "The first few specialized divisions of an activated animal egg. // Stage consisting of division of cells in the early embryo. The zygotes of many species undergo rapid cell cycles with no significant growth, producing a cluster of cells the same size as the original zygote. The different cells derived from cleavage are called blastomeres and form a compact mass called the morula. Cleavage ends with the formation of the blastula." [GO:0040016, Wikipedia:Cleavage_(embryo)]
xref: BILS:0000107
xref: XAO:1000004 ! cleavage
is_a: UBERON:0000105 ! life cycle stage
relationship: coincides_with GO:0040016
relationship: part_of UBERON:0000068 ! embryo stage
relationship: preceded_by UBERON:0000106 ! zygote stage

[Term]
id: UBERON:0000108
name: blastula stage
xref: BILS:0000108
xref: XAO:1000003 ! blastula
is_a: UBERON:0000105 ! life cycle stage
relationship: part_of UBERON:0000068 ! embryo stage
relationship: preceded_by UBERON:0000107 ! cleavage stage

[Term]
id: UBERON:0000109
name: gastrula stage
xref: BILS:0000109
xref: XAO:1000005 ! gastrula
is_a: UBERON:0000105 ! life cycle stage
relationship: coincides_with GO:0007369
relationship: part_of UBERON:0000068 ! embryo stage
relationship: preceded_by UBERON:0000108 ! blastula stage
xref: FBdv:00005317 ! gastrula stage

[Term]
id: UBERON:0000110
name: neurula stage
def: "The formation of a tube from the flat layer of ectodermal cells known as the neural plate. This will give rise to the central nervous system." [GO:0001841]
xref: BILS:0000110
xref: XAO:1000006 ! neurula
is_a: UBERON:0000105 ! life cycle stage
relationship: coincides_with GO:0001841
relationship: part_of UBERON:0000068 ! embryo stage
relationship: preceded_by UBERON:0000109 ! gastrula stage

[Term]
id: UBERON:0000111
name: organogenesis stage
def: "Process by which the ectoderm, endoderm, and mesoderm develop into the internal organs of the organism." [Wikipedia:Organogenesis]
synonym: "segmentation stage" RELATED []
xref: BILS:0000111
is_a: UBERON:0000105 ! life cycle stage
relationship: coincides_with GO:0048513
relationship: part_of UBERON:0000068 ! embryo stage
relationship: preceded_by UBERON:0000110 ! neurula stage

[Term]
id: UBERON:0000112
name: juvenile stage
def: "The stage of being a sexually immature adult animal." [XAO:1000010]
xref: BILS:0000112
xref: XAO:1000010 ! juvenile
is_a: UBERON:0000105 ! life cycle stage
relationship: part_of UBERON:0000066 ! juvenile-adult stage

[Term]
id: UBERON:0000113
name: post-juvenile adult stage
alt_id: UBERON:MIAA_0000403-XAO_1000009
def: "The stage of being a sexually mature adult animal." [UBERON:cjm]
synonym: "adult stage" BROAD []
xref: BILS:0000113
xref: MIAA:0000403 ! adult stage
xref: ZFS:0000044 ! adult
is_a: UBERON:0000105 ! life cycle stage
relationship: part_of UBERON:0000066 ! juvenile-adult stage
relationship: preceded_by UBERON:0000112 ! juvenile stage

[Term]
id: UBERON:0000114
name: lung connective tissue
xref: MA:0001782 ! lung connective tissue
is_a: UBERON:0002384 ! connective tissue
intersection_of: UBERON:0002384 ! connective tissue
intersection_of: part_of UBERON:0002048 ! lung

[Term]
id: UBERON:0000115
name: lung epithelium
is_a: UBERON:0000483 ! epithelium
intersection_of: UBERON:0000483 ! epithelium
intersection_of: part_of UBERON:0002048 ! lung
xref: MA:0001783 ! lung epithelium
xref: BTO:0001653 ! lung epithelium

[Term]
id: UBERON:0000116
name: lung saccule
def: "Primitive gas exchange portion of the lung composed of type I and type II cells[GO]." [GO:0060430]
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0002048 ! lung

[Term]
id: UBERON:0000117
name: respiratory tube
def: "A tube in the respiratory tract." [GO:0030323]
is_a: UBERON:0000025 ! tube
intersection_of: UBERON:0000025 ! tube
intersection_of: part_of UBERON:0001004 ! respiratory system
relationship: part_of UBERON:0000065 ! respiratory tract

[Term]
id: UBERON:0000118
name: lung bud
def: "Structure derived from foregut that becomes a lung." [GO:0060431, Wikipedia:Lung_buds]
synonym: "primary lung bud" EXACT []
is_a: UBERON:0000062 ! organ
relationship: develops_from UBERON:0000925 ! endoderm
xref: BTO:0001643 ! lung bud

[Term]
id: UBERON:0000119
name: cell layer
def: "Portion of tissue, that consists of one or more layers of cells connected to each other by cell junctions" [UBERON:cjm]
synonym: "cell sheath" RELATED []
synonym: "layer of cells" EXACT []
is_a: UBERON:0000479 ! portion of tissue
relationship: has_part CL:0000213 ! lining cell

[Term]
id: UBERON:0000120
name: blood brain barrier
def: "Cell layer consisting of lining cells that separates the central nervous system and the bloodstream. The BBB may consist of endothelial cells or glial cells. An endothelial barrier may have arisen independently several times during evolution. In bichir and lungfish the barrier is formed by brain endothelial cells, while in sturgeon it is formed by a complex perivascular glial sheath, but with no detectable tight junctions." [DOI:10.1002/glia.20642, Wikipedia:Blood-brain_barrier]
synonym: "BBB" RELATED []
synonym: "blood-brain barrier" EXACT []
is_a: UBERON:0000119 ! cell layer
relationship: adjacent_to UBERON:0000179 ! haemolymphatic fluid
relationship: adjacent_to UBERON:0000955 ! brain
xref: ncithesaurus:Blood-Brain_Barrier ! Blood-Brain Barrier

[Term]
id: UBERON:0000121
name: perineurium
def: "Connective tissue surrounding a fascicle." [Wikipedia:Perineurium]
xref: FMA:52585 ! Perineurium
is_a: UBERON:0002384 ! connective tissue
relationship: surrounds UBERON:0001019 ! fascicle
xref: ncithesaurus:Perineurium ! Perineurium
xref: BTO:0003153 ! perineurium

[Term]
id: UBERON:0000122
name: nerve fiber bundle
def: "multi-cell component structure consisting of a cluster of nerve fibers." [UBERON:cjm]
synonym: "funiculus" EXACT []
xref: FBbt:00005099
is_a: UBERON:0000477 ! anatomical cluster
relationship: has_part UBERON:0001021 ! nerve
xref: FMA:76738 ! Funiculus

[Term]
id: UBERON:0000123
name: endodeurium
def: "a layer of delicate connective tissue that encloses the myelin sheath of a nerve fiber within a funiculus." [Wikipedia:Endodeurium]
xref: FMA:52586 ! Endoneurium
is_a: UBERON:0002384 ! connective tissue
relationship: surrounds UBERON:0001021 ! nerve

[Term]
id: UBERON:0000124
name: epineurium
def: "outermost layer of connective tissue surrounding a peripheral nerve. It includes the blood vessels supplying the nerve. It consists of adipose tissue and fibrocollagenous tissues." [Wikipedia:Epineurium]
xref: FMA:12234 ! Epineurium
is_a: UBERON:0002384 ! connective tissue
relationship: surrounds UBERON:0002003 ! peripheral nerve
xref: ncithesaurus:Epineurium ! Epineurium
xref: BTO:0003154 ! epineurium

[Term]
id: UBERON:0000125
name: neural nucleus
def: "Anatomical structure consisting of a discrete aggregate of neuronal soma[GO]." [GO_REF:0000021, Wikipedia:Nucleus_(neuroanatomy)]
synonym: "nucleus" BROAD []
synonym: "nucleus of neuraxis" RELATED []
is_a: UBERON:0000064 ! organ part
xref: FMA:83686 ! Nucleus of neuraxis

[Term]
id: UBERON:0000126
name: cranial nerve nucleus
def: "collection of neurons (gray matter) in the brain stem that is associated with one or more cranial nerves." [Wikipedia:Cranial_nerve_nucleus]
synonym: "Nucleus of cranial nerve" EXACT []
synonym: "nucleus of cranial nerve" EXACT []
xref: FMA:54501 ! Nucleus of cranial nerve
is_a: UBERON:0002308 ! nucleus of brain
intersection_of: UBERON:0002308 ! nucleus of brain
intersection_of: part_of UBERON:0001785 ! cranial nerve

[Term]
id: UBERON:0000127
name: facial nucleus
synonym: "facial nerve nucleus" EXACT []
xref: FMA:54572 ! Facial nucleus
is_a: UBERON:0000126 ! cranial nerve nucleus
intersection_of: UBERON:0002308 ! nucleus of brain
intersection_of: part_of UBERON:0001647 ! facial nerve
relationship: part_of UBERON:0000988 ! pons
xref: ncithesaurus:Facial_Nerve_Nucleus ! Facial Nerve Nucleus

[Term]
id: UBERON:0000128
name: olivary body
def: "prominent oval structure in the medulla oblongata, present in pairs, the lower portion of the brainstem. They contain the olivary nuclei" [Wikipedia:Olivary_body]
synonym: "olive" RELATED []
synonym: "olive body" EXACT []
is_a: UBERON:0000061 ! anatomical structure
relationship: part_of UBERON:0001896 ! medulla oblongata

[Term]
id: UBERON:0000151
name: pectoral fin
def: "The paired pectoral fins are located on each side, usually just behind the operculum, and are homologous to the forelimbs of tetrapods." [Wikipedia:Pectoral_fin#Fins]
xref: TAO:0001161 ! pectoral fin
xref: ZFA:0001161 ! pectoral fin
is_a: UBERON:0002534 ! fin

[Term]
id: UBERON:0000152
name: pelvic fin
def: "The paired pelvic or ventral fins are located ventrally below the pectoral fins. They are homologous to the hindlimbs of tetrapods. The pelvic fin assists the fish in going up or down through the water, turning sharply, and stopping quickly." [Wikipedia:Pectoral_fin#Fins]
xref: TAO:0001184 ! pelvic fin
xref: ZFA:0001184 ! pelvic fin
is_a: UBERON:0002534 ! fin

[Term]
id: UBERON:0000153
name: anterior region of body
is_a: UBERON:0002100 ! trunk

[Term]
id: UBERON:0000154
name: posterior region of body
is_a: UBERON:0002100 ! trunk

[Term]
id: UBERON:0000155
name: theca cell layer
def: "A layer of the ovarian follicles. They appear as the follicles become tertiary follicles. The theca folliculi are responsible for the production of testosterone from androstenedione in females, and indirectly the production of estrogens by supplying the neighboring granulosa cells with androstenedione that can then be used as a substrate for aromatase." [Wikipedia:Theca_of_follicle]
synonym: "layer of theca cells" EXACT []
synonym: "theca cell layer of ovarian follicle" EXACT []
synonym: "theca folliculi" RELATED []
synonym: "theca of follicle" EXACT []
xref: FMA:18656 ! Theca folliculi
xref: TAO:0001113 ! thecal cell layer
xref: ZFA:0001113 ! thecal cell layer
is_a: UBERON:0000119 ! cell layer
relationship: has_part CL:0000503 ! theca cell
relationship: part_of UBERON:0001305 ! follicle of ovary

[Term]
id: UBERON:0000156
name: theca externa
def: "The theca externa is the outer layers of the theca folliculi. It contains abundant collagen and is mainly supportive." [Wikipedia:Theca_externa#Theca_externa]
xref: FMA:18657 ! Tunica externa of theca folliculi
is_a: UBERON:0000158 ! membranous layer
relationship: part_of UBERON:0000155 ! theca cell layer
relationship: surrounds UBERON:0000157 ! theca interna
xref: BTO:0002852 ! theca externa

[Term]
id: UBERON:0000157
name: theca interna
def: "Theca interna cells express receptors for luteinizing hormone, which when activated will stimulate the production of androstenedione from cholesterol by the enzyme desmolase. Androstenedione ultimately gives the granulosa cells the precursor substrate for estrogen manufacturing." [Wikipedia:Theca_externa#Theca_interna]
xref: FMA:18658 ! Tunica interna of theca folliculi
is_a: UBERON:0000158 ! membranous layer
relationship: part_of UBERON:0000155 ! theca cell layer
xref: BTO:0002851 ! theca interna

[Term]
id: UBERON:0000158
name: membranous layer
xref: FMA:82500 ! Membranous layer
is_a: UBERON:0000479 ! portion of tissue

[Term]
id: UBERON:0000159
name: anal canal
def: "Organ with organ cavity which is continuous proximally with the rectum and distally terminates with the anus. Examples: There is only one anal canal. // A chain of very large cuboidal cells forming a wide central lumen in which food arrives from the posterior pharynx, is digested, and from which waste products proceed to the rectum. Intestinal rings form in groups of two and four cells surrounding the common lumen; thus the epithelium is only one cell deep at any point, with neighboring cells firmly secured to their neighbors by apical adherens junctions. These cells have very large nuclei and many large vacuoles, yolk granules, and other inclusions; the latter increase in number and electron density as the animal ages. // a feature of the male tail, caudal to the proctodeum, where the vas deferens and the intestine open out jointly near the tail tip to discharge their contents." [WA:dh, Wikipedia:Anal_canal]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "adult alimentary canal" RELATED []
synonym: "Anal canal" EXACT []
synonym: "anal canal" EXACT []
synonym: "Anal canal viewed anatomically" EXACT []
synonym: "anal canal viewed anatomically" EXACT []
synonym: "anal pad" RELATED []
synonym: "anal region" EXACT []
synonym: "Anatomical anal canal" EXACT []
synonym: "anatomical anal canal" EXACT []
synonym: "anus" RELATED []
synonym: "cloaca" RELATED []
synonym: "cloacal chamber" RELATED []
synonym: "mesenteron" RELATED []
xref: EFO:0000847 ! anal region
xref: EHDAA:2931 ! anal region
xref: FMA:15703 ! Anal canal
xref: galen:AnalCanal
xref: HOG:0000395 ! anal region
xref: MA:0000330 ! anal canal
xref: MAT:0000042 ! anal region
xref: MIAA:0000042 ! anal region
xref: ncithesaurus:Anal_Canal
xref: TAO:0000330 ! cloacal chamber
xref: ZFA:0000330 ! cloacal chamber
is_a: UBERON:0002075 ! viscus
relationship: part_of UBERON:0001046 ! hindgut
relationship: part_of UBERON:0001353 ! anal part of perineum
xref: BTO:0001978 ! anal canal

[Term]
id: UBERON:0000160
name: intestine
alt_id: UBERON:FBbt_00005785-FMA_15703-FMA_7199-MA_0000328-MA_0000330-MIAA_0000042-MIAA_0000043-WBbt_0005772-WBbt_0005774-XAO_0000129-XAO_0000244-ZFA_0000330-ZFA_0001338
def: "Segment of the alimentary canal extending from the stomach to the anus and, in humans and other mammals, consists of two segments, the small intestine and the large intestine." [GOC:GO, Wikipedia:Intestine]
subset: uberon_slim
synonym: "bowel" EXACT []
xref: BTO:0000648
xref: EFO:0000834 ! intestine
xref: FMA:7199 ! Intestine
xref: galen:Intestine
xref: HOG:0000056 ! intestine
xref: MA:0000328 ! intestine
xref: MIAA:0000043 ! intestine
xref: TAO:0001338 ! intestine
xref: WBbt:0005772 ! intestine
xref: XAO:0000129 ! intestine
xref: ZFA:0001338 ! intestine
is_a: UBERON:0000061 ! anatomical structure
relationship: part_of UBERON:0001555 ! gut
xref: ncithesaurus:Intestine ! Intestine

[Term]
id: UBERON:0000161
name: orifice
def: "Anatomical conduit that connects two adjacent body spaces, surrounded by two or more subdivisions of two or more organs. Examples: right atrioventricular orifice, orifice of artery, hilum of kidney, porta hepatis." [FMA:3724]
synonym: "anatomical orifice" EXACT [FMA:3724]
xref: FMA:3724 ! Anatomical orifice
is_a: UBERON:0000464 ! anatomical space

[Term]
id: UBERON:0000162
name: cloaca
def: "Posterior opening that serves as the only such opening for the intestinal and urinary tracts of certain animal species" [Wikipedia:Cloaca]
comment: Human beings only have an embryonic cloaca, which is split up into separate tracts during the development of the urinary and reproductive organs[WP]
synonym: "vent" RELATED []
synonym: "cloacal chamber" RELATED []
xref: HOG:0001186 ! cloaca
xref: AAO:0000095 ! cloaca
xref: WBbt:0005774 ! cloaca
xref: XAO:0000244 ! cloaca
xref: ZFA:0000330 ! cloacal chamber
is_a: UBERON:0000161 ! orifice
xref: ncithesaurus:Cloaca ! Cloaca

[Term]
id: UBERON:0000163
name: embryonic cloaca
def: "Structure in the development of the urinary and reproductive organs." [Wikipedia:Cloaca_(embryology)]
is_a: UBERON:0002050 ! embryonic structure
intersection_of: UBERON:0000162 ! cloaca
intersection_of: part_of UBERON:0000922 ! embryo
relationship: develops_from UBERON:0003064 ! intermediate mesoderm

[Term]
id: UBERON:0000164
name: urogenital sinus
def: "part of the human body only present in the development of the urinary and reproductive organs. It is the ventral part of the cloaca, formed after the cloaca separates from the rectum. It eventually becomes, among other things, the bladder." [Wikipedia:Urogenital_sinus]
xref: HOG:0000414 ! urogenital sinus
is_a: UBERON:0000061 ! anatomical structure
relationship: develops_from UBERON:0003064 ! intermediate mesoderm
xref: ncithesaurus:Urogenital_Sinus ! Urogenital Sinus

[Term]
id: UBERON:0000165
name: mouth
def: "First portion of the alimentary canal that receives food and begins digestion by mechanically breaking up the solid food particles into smaller pieces and mixing them with saliva. The oral mucosa is the mucous membrane epithelium lining the inside of the mouth." [Wikipedia:Mouth]
subset: uberon_slim
synonym: "adult mouth" EXACT []
xref: BTO:0001090
xref: EFO:0000825 ! mouth
xref: FMA:49184 ! Mouth
xref: GAID:75 ! mouth
xref: HOG:0000812 ! mouth
xref: MA:0002474 ! mouth
xref: MAT:0000038 ! mouth
xref: MIAA:0000038 ! mouth
xref: OpenCyc:Mx4rvVidh5wpEbGdrcN5Y29ycA
xref: TAO:0000547 ! mouth
xref: XAO:0003029 ! mouth
xref: ZFA:0000547 ! mouth
is_a: UBERON:0000061 ! anatomical structure
relationship: develops_from UBERON:0000930 ! stomodeum
relationship: part_of UBERON:0001555 ! gut

[Term]
id: UBERON:0000166
name: oral opening
def: "The opening of the head through which food passes into the body." [NLM:mouth]
subset: uberon_slim
synonym: "adult mouth" RELATED []
synonym: "mouth" RELATED []
synonym: "Oral part of face" EXACT []
synonym: "oral part of face" EXACT []
synonym: "Oral region" EXACT []
synonym: "oral region" EXACT []
synonym: "Subdivision of mouth" EXACT []
synonym: "subdivision of mouth" EXACT []
xref: EHDAA:542 ! oral region
xref: FMA:59806 ! Oral opening
xref: HOG:0000280 ! oral region
xref: MA:0000341 ! oral region
xref: TAO:0000590 ! oral region
xref: ZFA:0000590 ! oral region
is_a: UBERON:0000161 ! orifice
relationship: part_of UBERON:0000165 ! mouth

[Term]
id: UBERON:0000167
name: oral cavity
subset: uberon_slim
synonym: "cavity of mouth" EXACT []
xref: AAO:0000053 ! buccal_cavity
xref: EHDAA:6970 ! oral cavity
xref: FMA:20292 ! Oral cavity
xref: HAO:0000669 ! oral cavity
xref: HOG:0000188 ! oral cavity
xref: TAO:0001027 ! oral cavity
xref: WBbt:0005255 ! buccal cavity
xref: XAO:0000126 ! oral cavity
xref: ZFA:0001027 ! oral cavity
is_a: UBERON:0002553 ! anatomical cavity
relationship: part_of UBERON:0000165 ! mouth
xref: ncithesaurus:Oral_Cavity ! Oral Cavity

[Term]
id: UBERON:0000168
name: segment of colon
xref: FMA:222905 ! Segment of colon
is_a: UBERON:0000063 ! organ segment
relationship: part_of UBERON:0001155 ! colon


[Term]
id: UBERON:0000170
name: pair of lungs
synonym: "Lungs" EXACT []
synonym: "lungs" EXACT []
synonym: "Lungs pair" EXACT []
synonym: "lungs pair" EXACT []
synonym: "Pair of lungs" EXACT []
synonym: "Set of lungs" EXACT []
synonym: "set of lungs" EXACT []
xref: BTO:0000763
xref: FMA:68877 ! Pair of lungs
xref: OpenCyc:Mx4rvVjKy5wpEbGdrcN5Y29ycA
relationship: has_part UBERON:0002167 ! right lung
relationship: has_part UBERON:0002168 ! left lung
xref: ncithesaurus:Lung ! Lung

[Term]
id: UBERON:0000171
name: respiration organ
def: "Organ that functions in gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms." [GO:0007585]
synonym: "breathing organ" EXACT []
synonym: "gas exchange organ" RELATED []
synonym: "respiratory organ" EXACT []
is_a: UBERON:0000062 ! organ
intersection_of: UBERON:0000062 ! organ
intersection_of: part_of UBERON:0001004 ! respiratory system
relationship: part_of UBERON:0001004 ! respiratory system

[Term]
id: UBERON:0000172
name: vomit
def: "Vomit is a bodily fluid consisting of the expulsed contents of the stomach of an organism disgorged through the mouth or nose." [ENVO:00000338]
xref: ENVO:00000338
xref: OpenCyc:Mx4rvViQTJwpEbGdrcN5Y29ycA
is_a: UBERON:0000463 ! portion of organism substance

[Term]
id: UBERON:0000173
name: amniotic fluid
def: "Amniotic fluid is a bodily fluid consisting of watery liquid surrounding and cushioning a growing fetus within the amnion. It allows the fetus to move freely without the walls of the uterus being too tight against its body. Buoyancy is also provided." [ENVO:02000021]
xref: BTO:0000068
xref: ENVO:02000021
xref: HOG:0001267 ! amniotic fluid
is_a: UBERON:0000463 ! portion of organism substance
relationship: surrounds UBERON:0000922 ! embryo
xref: MA:0002893 ! amniotic fluid
xref: ncithesaurus:Amniotic_Fluid ! Amniotic Fluid

[Term]
id: UBERON:0000174
name: excreta
alt_id: UBERON:0000324
alt_id: UBERON:BTO_0000491-FMA_9674
def: "Excreta are bodily fluids consisting of waste matter, such as sweat or feces, discharged from the body." [ENVO:02000022]
synonym: "excretion" EXACT []
xref: BTO:0000491
xref: ENVO:02000022
xref: FMA:9674 ! Excretion
xref: galen:Excretion
is_a: UBERON:0000463 ! portion of organism substance

[Term]
id: UBERON:0000175
name: pleural effusion
def: "Pleural effusion is a bodily fluid that is produced in exess and accumulates in the pleural cavity, the fluid-filled space that surrounds the lungs. Excessive amounts of such fluid can impair breathing by limiting the expansion of the lungs during inhalation." [ENVO:02000033]
xref: ENVO:02000033
xref: ncithesaurus:Pleural_Effusion
xref: OpenCyc:Mx4rLaTGCK2TEduAAAAOpmP6tw
is_a: UBERON:0000463 ! portion of organism substance

[Term]
id: UBERON:0000176
name: oronasal secretion
def: "Oronasal secretion is a bodily fluid secreted from the body via the mouth or nose." [ENVO:02000035]
xref: ENVO:02000035
is_a: UBERON:0000463 ! portion of organism substance

[Term]
id: UBERON:0000177
name: pus
def: "Pus is a bodily fluid consisting of a whitish-yellow or yellow substance produced during inflammatory responses of the body that can be found in regions of pyogenic bacterial infections. Pus is produced from the dead and living cells which travel into the intercellular spaces around the affected cells." [ENVO:02000038]
xref: ENVO:02000038
xref: OpenCyc:Mx4rvVjG6ZwpEbGdrcN5Y29ycA
is_a: UBERON:0000463 ! portion of organism substance
xref: ncithesaurus:Pus ! Pus

[Term]
id: UBERON:0000178
name: blood
def: "Circulating body substance which consists of blood plasma and hemoglobin-carrying red blood cells. Excludes blood analogues (see UBERON:0000179 haemolymphatic fluid)." [FMA:9670, Wikipedia:Blood]
subset: uberon_slim
synonym: "blood" EXACT []
synonym: "portion of blood" EXACT []
xref: BTO:0000089
xref: EFO:0000296 ! blood
xref: ENVO:02000027
xref: FMA:9670 ! Portion of blood
xref: galen:Blood
xref: HOG:0000224 ! blood
xref: MA:0000059 ! blood
xref: MIAA:0000315 ! blood
xref: OpenCyc:Mx4rvVjI8JwpEbGdrcN5Y29ycA
xref: TAO:0000007 ! blood
xref: XAO:0000124 ! blood
xref: ZFA:0000007 ! blood
is_a: UBERON:0000179 ! haemolymphatic fluid
relationship: part_of UBERON:0002390 ! hematopoietic system
xref: ncithesaurus:Blood ! Blood

[Term]
id: UBERON:0000179
name: haemolymphatic fluid
def: "Circulating fluid that is part of the hemolymphoid system. Blood, lymph, interstitial fluid or its analogs." []
synonym: "blood or blood analog" RELATED []
is_a: UBERON:0000463 ! portion of organism substance
intersection_of: UBERON:0000463 ! portion of organism substance
intersection_of: part_of UBERON:0002390 ! hematopoietic system
created_by: cjm
creation_date: 2009-04-08T04:38:19Z

[Term]
id: UBERON:0000200
name: gyrus
def: "A ridge on the cerebral cortex. It is generally surrounded by one or more sulci." [Wikipedia:Gyrus]
is_a: UBERON:0000064 ! organ part
created_by: cjm
creation_date: 2009-04-09T07:21:39Z

[Term]
id: UBERON:0000201
name: endothelial blood brain barrier
def: "A blood brain barrier that is composed of endothelial cells." [UBERON:cjm]
is_a: UBERON:0000120 ! blood brain barrier
intersection_of: UBERON:0000120 ! blood brain barrier
intersection_of: has_part CL:0000115 ! endothelial cell
relationship: has_part CL:0000115 ! endothelial cell
created_by: cjm
creation_date: 2009-04-10T08:15:44Z

[Term]
id: UBERON:0000202
name: glial blood brain barrier
def: "A blood brain barrier composed of glial cells." [UBERON:cjm]
xref: FBbt:00007091 ! sub-perineurial glial sheath
is_a: UBERON:0000120 ! blood brain barrier
intersection_of: UBERON:0000120 ! blood brain barrier
intersection_of: has_part CL:0000124 ! glial cell
relationship: has_part CL:0000124 ! glial cell
created_by: cjm
creation_date: 2009-04-10T08:42:24Z

[Term]
id: UBERON:0000203
name: pallium
def: "Roof of the telencephalon. In humans the cerebrum has three parts: the archipallium, the paleopallium and the neopallium. The developing telencephalon or forebrain is divided into pallium and subpallium. In amphibians, the cerebrum includes archipallium, paleopallium and some of the basal nuclei. Reptiles first developed a neopallium, which continued to develop in the brains of more recent species to become the neocortex of humans and Old World monkeys. In fish, the archipallium is the largest part of the cerebrum. Some researchers suggest the early archipallium gave rise to the human hippocampus." [GO:0021543, Wikipedia:Pallium_(neuroanatomy)]
xref: ZFA:0007007 ! pallium
relationship: part_of UBERON:0001893 ! telencephalon
created_by: cjm
creation_date: 2009-04-18T12:03:09Z

[Term]
id: UBERON:0000204
name: subpallium
def: "Base region of the telencephalon." [GO:0021544]
synonym: "ventral telencephalon" EXACT [ZFA:0000304]
xref: ZFA:0000304 ! ventral telencephalon
relationship: part_of UBERON:0001893 ! telencephalon
created_by: cjm
creation_date: 2009-04-18T12:12:27Z
xref: BTO:0003401 ! subpallium

[Term]
id: UBERON:0000205
name: echinoderm gill
def: "Respiration in the Echinodermata (includes starfish and sea urchins) is carried out using a very primitive version of gills called papulli. These are thin protuberances on the surface of the body containing diverticula of the water vascular system." []
is_a: UBERON:0002535 ! gill
created_by: cjm
creation_date: 2009-04-18T01:13:57Z

[Term]
id: UBERON:0000206
name: pharyngeal gill
def: "Gills of vertebrates are developed in the walls of the pharynx along a series of gill slits opening to the exterior. In fish, the gills are located on both sides of the pharynx. Gills are made of filaments which help increase surface area for oxygen exchange. In bony fish, the gills are covered by a bony cover called an operculum. When a fish breathes, it opens its mouth at regular times and draws in a mouthful of water. It then draws the sides of its throat together, forcing the water through the gill openings. The water passes over the gills on the outside. Valves inside the mouth keep the water from escaping through the mouth again. The operculum can be very important in adjusting the pressure of water inside of the pharynx to allow proper ventilation of the gills. Lampreys and sharks lack an operculum, they have multiple gill openings. Also, they must use different methods to force water over the gills. In sharks and rays, this ventilation of the gills is achieved either by the use of spiracles or ram ventilation (ventilation by constantly swimming). Although some animals use this method it is much better for animals to use a spiracle because they are less susceptible to injury." [Wikipedia:Gill#Vertebrate_gills]
is_a: UBERON:0002535 ! gill
relationship: adjacent_to UBERON:0001042 ! pharynx
created_by: cjm
creation_date: 2009-04-18T01:18:17Z

[Term]
id: UBERON:0000207
name: acellular lens
def: "A chitinous extracellular secretion of the four underlying cone cells and the pigment cells." [GO:0048058]
synonym: "compound eye corneal lens" EXACT [GO:0048058]
synonym: "invertebrate lens" RELATED []
xref: FBbt:00004199 ! lens
is_a: UBERON:0000476 ! acellular anatomical structure
is_a: UBERON:0000965 ! lens
created_by: cjm
creation_date: 2009-04-18T01:35:32Z

[Term]
id: UBERON:0000208
name: cellular lens
synonym: "vertebrate lens" RELATED []
is_a: UBERON:0000965 ! lens
created_by: cjm
creation_date: 2009-04-18T01:37:39Z

[Term]
id: UBERON:0000209
name: tetrapod frontal bone
alt_id: UBERON:FMA_9613-MA_0001469-ZFA_0000486
def: "In humans: A bone resembling a cockleshell in two portions the squama frontalis, corresponding with the region of the forehead, and an orbital or horizontal portion, the pars orbitalis, which enters into the formation of the roofs of the orbital and nasal cavities. In teleost fish, where it is called the parietal bone: Paired dermal bone that covers the hind part of the cranium, overlapping the dorsal edge of the sphenotic, pterotic, epiotic and the anterior edge of the supraoccipital. The parietal are overlapped anteriorly by the frontal." [Wikipedia:Frontal_bone, ZFA:0000486]
comment: The frontal bone in teleost fish is the homolog of the parietal bone in vertebrates
synonym: "frontal bone" NARROW [FMA:52734]
synonym: "parietal bone" NARROW [TAO:0000486]
synonym: "post parietal" RELATED [ZFA:0000486]
synonym: "teleost parietal bone" EXACT [TAO:0000486]
xref: FMA:52734 ! Frontal bone
xref: GAID:226 ! frontal bone
xref: MA:0001466 ! frontal bone
xref: TAO:0000486 ! parietal bone
xref: ZFA:0000486 ! parietal bone
is_a: UBERON:0002514 ! intramembranous bone
relationship: part_of UBERON:0001703 ! neurocranium

[Term]
id: UBERON:0000210
name: tetrapod parietal bone
alt_id: UBERON:FMA_52734-MA_0001466-ZFA_0000514
def: "In humans: bone forming side and roof of cranium. Each bone is irregularly quadrilateral in form, and has two surfaces, four borders, and four angles. In teleost fish, where it is called the frontal bone: Large elongated paired dermal bones that roof the cranium and bear part of the supraorbital canal. The frontal bones cover the upper edge of the lateral ethmoid, orbitosphenoid and pterosphenoids and overlaps the parietal bone posteriorly." [Wikipedia:Parietal_bone, ZFA:0000514]
comment: This class was created automatically from a combination of ontologies
synonym: "frontal bone" NARROW [TAO:0000514]
synonym: "parietal bone" NARROW [FMA:9613]
synonym: "teleost frontal bone" NARROW [TAO:0000514]
xref: FMA:9613 ! Parietal bone
xref: GAID:229 ! parietal bone
xref: MA:0001469 ! parietal bone
xref: TAO:0000514 ! frontal bone
xref: ZFA:0000514 ! frontal bone
is_a: UBERON:0002514 ! intramembranous bone
relationship: part_of UBERON:0001703 ! neurocranium

[Term]
id: UBERON:0000211
name: ligament
def: "Short band of tough fibrous dense regular connective tissue composed mainly of long, stringy collagen fibers. Ligaments connect bones to other bones to form a joint." [Wikipedia:Ligament]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "articular ligament" EXACT [Wikipedia:Ligament]
synonym: "fibrous ligament" EXACT [Wikipedia:Ligament]
synonym: "true ligament" EXACT [Wikipedia:Ligament]
xref: FMA:21496 ! Ligament organ
xref: GAID:118 ! ligament
xref: galen:Ligament
xref: HOG:0001272 ! ligament
xref: MA:0000113 ! ligament
xref: OpenCyc:Mx4rvVjqpZwpEbGdrcN5Y29ycA
xref: TAO:0001682 ! ligament
xref: ZFA:0001675 ! ligament
is_a: UBERON:0002384 ! connective tissue
relationship: part_of UBERON:0002204 ! musculoskeletal system
xref: ncithesaurus:Ligament ! Ligament

[Term]
id: UBERON:0000212
name: toilet claw
def: "specialized claw or nail on the foot of certain primates, used for personal grooming." [Wikipedia:Toilet-claw]
is_a: UBERON:0001705 ! nail
created_by: cjm
creation_date: 2009-05-19T08:19:58Z

[Term]
id: UBERON:0000301
name: amniotic cavity
alt_id: UBERON:BTO_0000025-FMA_63941
xref: BTO:0000025
xref: FMA:63941 ! Amniotic cavity
xref: HOG:0000855 ! amniotic cavity
is_a: UBERON:0000464 ! anatomical space
relationship: contains UBERON:0000173
xref: ncithesaurus:Amniotic_Cavity ! Amniotic Cavity

[Term]
id: UBERON:0000303
name: adductor longus
alt_id: UBERON:BTO_0000029-FMA_22441
xref: BTO:0000029
xref: FMA:22441 ! Adductor longus
is_a: UBERON:0001630 ! muscle organ

[Term]
id: UBERON:0000304
name: tendon sheath
alt_id: UBERON:BTO_0000051-FMA_76715
def: "A layer of membrane around a tendon. It has 2 layers: synovial sheath + fibrous tendon sheath" [Wikipedia:Tendon_sheath]
comment: TODO: add layer relations
xref: BTO:0000051
xref: FMA:76715 ! Tendon sheath
is_a: UBERON:0000479 ! portion of tissue
relationship: surrounds UBERON:0000043
relationship: has_part UBERON:0002018

[Term]
id: UBERON:0000305
name: amnion
def: "A membrane building the amniotic sac that surrounds and protects an embryo. It is developed in reptiles, birds, and mammals, which are hence called “Amniota”; but not in amphibians and fish (Ichthyopsida), which are consequently termed “Anamniota”. The primary function of this is the protection of the embryo for its development. It stems from parts of the mesoderm on the outer side and the ectoderm on the inner side[WP]." [Wikipedia:Amnion]
alt_id: UBERON:BTO_0000065-FMA_80223
xref: BTO:0000065
xref: FMA:80223 ! Amnion
xref: HOG:0000721 ! amnion
xref: ncithesaurus:Amnion
is_a: UBERON:0000478 ! extraembryonic structure
relationship: surrounds UBERON:0000922 ! embryo
relationship: only_in_taxon NCBITaxon:32524 ! Amniota

[Term]
id: UBERON:0000307
name: blastula
alt_id: UBERON:BTO_0000128-FMA_83041
def: "An early stage of embryonic development in animals. It is produced by cleavage of a fertilized ovum and consists of a spherical layer of around 128 cells surrounding a central fluid-filled cavity called the blastocoel. The blastula follows the morula and precedes the gastrula in the developmental sequence." [Wikipedia:Blastula]
comment: TODO - check relationship with epiblast
synonym: "blastosphere" RELATED [Wikipedia:Blastula]
synonym: "Blastula" EXACT [FMA:83041]
xref: BTO:0000128
xref: FMA:83041 ! Blastocyst
is_a: UBERON:0002050 ! embryonic structure
xref: OGEM:000006 ! blastula
xref: OGES:000021 ! blastula
xref: OGES:000016 ! blastula
xref: OGES:000003 ! Blastula

[Term]
id: UBERON:0000309
name: body wall
alt_id: UBERON:BTO_0000139-FMA_10427
synonym: "Trunk wall" EXACT [FMA:10427]
synonym: "Wall of trunk" EXACT [FMA:10427]
xref: BTO:0000139
xref: FMA:10427 ! Body wall
xref: galen:BodyWall
is_a: UBERON:0000475 ! organism subdivision
relationship: part_of UBERON:0002100 ! trunk

[Term]
id: UBERON:0000310
name: breast
alt_id: UBERON:BTO_0000149-FMA_9601
synonym: "mammary part of chest" EXACT [FMA:9601]
synonym: "mammary region" EXACT [FMA:9601]
xref: BTO:0000149
xref: FMA:9601 ! Breast
xref: galen:Breast
is_a: UBERON:0000475 ! organism subdivision
relationship: part_of UBERON:0001443 ! chest
xref: ncithesaurus:Breast ! Breast

[Term]
id: UBERON:0000311
name: extensor
alt_id: UBERON:BTO_0000151-FMA_74561
xref: BTO:0000151
xref: FMA:74561 ! Extensor
is_a: UBERON:0000061 ! anatomical structure

[Term]
id: UBERON:0000312
name: cambium
alt_id: UBERON:BTO_0000170-FMA_234358
synonym: "Cambial layer" EXACT [FMA:234358]
synonym: "Cambium" EXACT [FMA:234358]
synonym: "Cambium layer of periosteum" EXACT [FMA:234358]
synonym: "Inner cambial layer of periosteum" EXACT [FMA:234358]
xref: BTO:0000170
xref: FMA:234358 ! Cambial layer of periosteum
is_a: UBERON:0000064 ! organ part
relationship: constitutional_part_of UBERON:0002515 ! periosteum

[Term]
id: UBERON:0000313
name: tibial cartilage
alt_id: UBERON:BTO_0000207-FMA_33923
synonym: "Tibial cartilage" EXACT [FMA:33923]
xref: BTO:0000207
xref: FMA:33923 ! Cartilage of tibia
is_a: UBERON:0002384 ! connective tissue

[Term]
id: UBERON:0000314
name: cecum mucosa
alt_id: UBERON:BTO_0000213-FMA_14998
synonym: "Cecal mucosa" EXACT [FMA:14998]
synonym: "Cecum mucosa" EXACT [FMA:14998]
xref: BTO:0000213
xref: FMA:14998 ! Mucosa of cecum
is_a: UBERON:0000064 ! organ part
intersection_of: UBERON:0000344 ! mucosa
intersection_of: OBO_REL:part_of UBERON:0001153 ! cecum

[Term]
id: UBERON:0000315
name: subarachnoid space
alt_id: UBERON:BTO_0000230-FMA_83716
xref: BTO:0000230
xref: FMA:83716 ! Subarachnoid space
is_a: UBERON:0000464 ! anatomical space

[Term]
id: UBERON:0000316
name: cervical mucus
alt_id: UBERON:BTO_0000242-FMA_83689
def: "Thick acidic mucus that blocks the cervical os after mestruation[WP]. This 'infertile' mucus blocks spermatozoa from entering the uterus." [Wikipedia:Cervix#Cervical_mucus]
xref: BTO:0000242
xref: FMA:83689 ! Cervical mucus
is_a: UBERON:0000912 ! mucus

[Term]
id: UBERON:0000317
name: colonic mucosa
alt_id: UBERON:BTO_0000271-FMA_14984
synonym: "Colon mucosa" EXACT [FMA:14984]
synonym: "Colonic mucosa" EXACT [FMA:14984]
synonym: "Colonic mucous membrane" EXACT [FMA:14984]
xref: BTO:0000271
xref: FMA:14984 ! Mucosa of colon
is_a: UBERON:0000064 ! organ part
intersection_of: UBERON:0000344 ! mucosa
intersection_of: OBO_REL:part_of UBERON:0001155 ! colon

[Term]
id: UBERON:0000319
name: cytotrophoblast
alt_id: UBERON:BTO_0000322-FMA_83039
synonym: "Cellular trophoblast" EXACT [FMA:83039]
synonym: "Cytotrophoblastic cell" EXACT [FMA:83039]
xref: BTO:0000322
xref: FMA:83039 ! Cytotrophoblast
is_a: UBERON:0002050 ! embryonic structure
xref: ncithesaurus:Cytotrophoblast ! Cytotrophoblast

[Term]
id: UBERON:0000320
name: duodenal mucosa
alt_id: UBERON:BTO_0000367-FMA_14942
synonym: "Doudenal mucosa" EXACT [FMA:14942]
synonym: "Duodenal mucosa" EXACT [FMA:14942]
synonym: "Duodenal mucous membrane" EXACT [FMA:14942]
xref: BTO:0000367
xref: FMA:14942 ! Mucosa of duodenum
is_a: UBERON:0000064 ! organ part

[Term]
id: UBERON:0000322
name: cerebral lobe
alt_id: UBERON:BTO_0000445-FMA_77800
synonym: "Cerebral lobes" EXACT [FMA:77800]
synonym: "Cerebral lobes set" EXACT [FMA:77800]
xref: BTO:0000445
xref: FMA:77800 ! Set of cerebral lobes
is_a: UBERON:0000061 ! anatomical structure

[Term]
id: UBERON:0000323
name: fetus
alt_id: UBERON:BTO_0000449-FMA_63919
comment: TODO - check fetus/embryo. WP: An embryo (irregularly from Greek: ἔμβρυον, plural ἔμβρυα, lit. "that which grows," from en- "in" + bryein "to swell, be full"; the proper Latinate form would be embryum) is a multicellular diploid eukaryote in its earliest stage of development, from the time of first cell division until birth, hatching, or germination. In humans, it is called an embryo until about eight weeks after fertilization (i.e. ten weeks LMP), and from then it is instead called a fetus.
xref: BTO:0000449
xref: FMA:63919 ! Fetus
is_a: UBERON:0002050 ! embryonic structure
xref: OGES:000023 ! fetus
xref: EV:0300011 ! fetus
xref: ncithesaurus:Fetus ! Fetus

[Term]
id: UBERON:0000922
name: embryo
alt_id: UBERON:FBbt_00000052-FMA_69068-MIAA_0000019-XAO_0000113
def: "Anatomical entity that comprises the organism in the early stages of growth and differentiation that are characterized by cleavage, the laying down of fundamental tissues, and the formation of primitive organs and organ systems. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant." [BTO:0000379, FB:FBrf0039741, FB:FBrf0041814, GO:0009790, Wikipedia:Embryo]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "developmental tissue" EXACT []
synonym: "Embryo" EXACT []
xref: BTO:0000379
xref: EHDAA:38 ! embryo
xref: FBbt:00000052 ! embryo
xref: FMA:69068 ! Embryo
xref: GAID:963 ! embryo
xref: MAT:0000226 ! embryo
xref: MIAA:0000019 ! developmental tissue
xref: XAO:0000113 ! embryo
xref: XAO:1000012 ! embryonic stage
is_a: UBERON:0002050 ! embryonic structure
relationship: existence_ends_with UBERON:0000068 ! embryo stage
relationship: existence_starts_with UBERON:0000068 ! embryo stage
xref: OGEM:000001 ! embryo
xref: OGES:000022 ! embryo
xref: EV:0300001 ! embryo
xref: OGES:000000 ! Embryo
xref: ncithesaurus:Embryo ! Embryo

[Term]
id: UBERON:0000325
name: gastric gland
alt_id: UBERON:BTO_0000503-FMA_14919
xref: BTO:0000503
xref: FMA:14919 ! Gastric gland
is_a: UBERON:0002530 ! gland

[Term]
id: UBERON:0000326
name: pancreatic juice
alt_id: UBERON:BTO_0000504-FMA_62973
def: "Pancreatic juice is slightly alkaline and contains numerous enzymes and inactive enzyme precursors including alpha-amylase, chymotrypsinogen, lipase, procarboxypeptidase, proelastase, prophospholipase A2, ribonuclease, and trypsinogen. Its high concentration of bicarbonate ions helps to neutralize the acid from the stomach." [GO:0030157]
xref: BTO:0000504
xref: FMA:62973 ! Pancreatic juice
is_a: UBERON:0000463 ! portion of organism substance

[Term]
id: UBERON:0000328
name: gut wall
alt_id: UBERON:BTO_0000547-FMA_45653
synonym: "Gut wall" EXACT [FMA:45653]
xref: BTO:0000547
xref: FMA:45653 ! Wall of gut
is_a: UBERON:0000477 ! anatomical cluster
relationship: constitutional_part_of UBERON:0001555 ! gut
relationship: systemic_part_of UBERON:0001555 ! gut

[Term]
id: UBERON:0000329
name: hair root
alt_id: UBERON:BTO_0000555-FMA_70730
def: "The root of the hair ends in an enlargement, the hair bulb, which is whiter in color and softer in texture than the shaft, and is lodged in a follicular involution of the epidermis called the hair follicle. [Wikipedia]." [Wikipedia:Hair_root]
synonym: "Root of hair" EXACT [FMA:70730]
xref: BTO:0000555
xref: FMA:70730 ! Hair root
is_a: UBERON:0000061 ! anatomical structure
relationship: part_of UBERON:0001037 ! hair
xref: ncithesaurus:Hair_Root ! Hair Root

[Term]
id: UBERON:0000331
name: ileal mucosa
alt_id: UBERON:BTO_0000619-FMA_14956
synonym: "Ileal mucosa" EXACT [FMA:14956]
synonym: "Ileal mucous membrane" EXACT [FMA:14956]
synonym: "Ileum mucosa" EXACT [FMA:14956]
xref: BTO:0000619
xref: FMA:14956 ! Mucosa of ileum
is_a: UBERON:0000064 ! organ part
intersection_of: UBERON:0000344 ! mucosa
intersection_of: OBO_REL:part_of UBERON:0002116 ! ileum

[Term]
id: UBERON:0000332
name: yellow bone marrow
alt_id: UBERON:BTO_0000635-FMA_74596
xref: BTO:0000635
xref: FMA:74596 ! Yellow bone marrow
is_a: UBERON:0002371 ! bone marrow

[Term]
id: UBERON:0000333
name: intestinal gland
alt_id: UBERON:BTO_0000640-FMA_15052
comment: TODO check UBERON:0001983
synonym: "Glandula intestinalis" EXACT [FMA:15052]
xref: BTO:0000640
xref: FMA:15052 ! Intestinal gland
is_a: UBERON:0002530 ! gland
intersection_of: UBERON:0002530 ! gland
intersection_of: part_of UBERON:0001242 ! intestinal mucosa
relationship: part_of UBERON:0001242 ! intestinal mucosa

[Term]
id: UBERON:0000341
name: throat
alt_id: UBERON:BTO_0000828-FMA_228738
xref: BTO:0000828
xref: FMA:228738 ! Throat
is_a: UBERON:0000475 ! organism subdivision
xref: ncithesaurus:Throat ! Throat

[Term]
id: UBERON:0000344
name: mucosa
alt_id: UBERON:BTO_0000886-FMA_85355
def: "A lining of mostly endodermal origin, covered in epithelium, which is involved in absorption and secretion. They line various body cavities that are exposed to the external environment and internal organs. It is at several places continuous with skin: at the nostrils, the lips, the ears, the genital area, and the anus. The sticky, thick fluid secreted by the mucous membranes and gland is termed mucus. The term mucous membrane refers to where they are found in the body and not every mucous membrane secretes mucus[WP]" [Wikipedia:Mucous_membrane]
comment: TODO - check - mucosa vs region of mucosa
synonym: "Mucosa of organ" EXACT [FMA:85355]
synonym: "Mucous membrane" EXACT [FMA:85355]
synonym: "Organ mucosa" EXACT [FMA:85355]
xref: BTO:0000886
xref: FMA:85355 ! Mucosa
is_a: UBERON:0000064 ! organ part
xref: ncithesaurus:Mucosa ! Mucosa

[Term]
id: UBERON:0000345
name: myelin
alt_id: UBERON:BTO_0000894-FMA_62977
xref: BTO:0000894
xref: FMA:62977 ! Myelin
is_a: UBERON:0000061 ! anatomical structure
xref: ncithesaurus:Myelin ! Myelin

[Term]
id: UBERON:0000346
name: myelin membrane
alt_id: UBERON:BTO_0000895-FMA_73417
comment: BTO has def The multilamellar myelin membrane is a specisalised lipid-rich domain of the glial cell plasma membrane. FMA has primary term name Myelinated plasma membrane of Schwann cell
synonym: "Myelin membrane" EXACT [FMA:73417]
xref: BTO:0000895
xref: FMA:73417 ! Myelinated plasma membrane of Schwann cell
is_a: UBERON:0000470 ! cell part
relationship: has_part UBERON:0000345 ! myelin

[Term]
id: UBERON:0000347
name: myelin sheath
alt_id: UBERON:BTO_0000900-FMA_62983
xref: BTO:0000900
xref: FMA:62983 ! Myelin sheath
is_a: UBERON:0000470 ! cell part
relationship: has_part UBERON:0000345 ! myelin
xref: ncithesaurus:Myelin_Sheath ! Myelin Sheath

[Term]
id: UBERON:0000348
name: ophthalmic nerve
alt_id: UBERON:BTO_0000926-FMA_52621
synonym: "First division of fifth cranial nerve" EXACT [FMA:52621]
synonym: "First division of trigeminal nerve" EXACT [FMA:52621]
synonym: "Nervus ophthalmicus (V1)" EXACT [FMA:52621]
synonym: "Nervus ophthalmicus (Va)" EXACT [FMA:52621]
synonym: "Ophthalmic division [V1]" EXACT [FMA:52621]
synonym: "Ophthalmic division [Va]" EXACT [FMA:52621]
synonym: "Ophthalmic division of fifth cranial nerve" EXACT [FMA:52621]
synonym: "Ophthalmic division of trigeminal nerve (V1)" EXACT [FMA:52621]
synonym: "Ophthalmic division of trigeminal nerve (Va)" EXACT [FMA:52621]
synonym: "Ophthalmic nerve [V1]" EXACT [FMA:52621]
synonym: "Ophthalmic nerve [Va]" EXACT [FMA:52621]
xref: BTO:0000926
xref: FMA:52621 ! Ophthalmic nerve
is_a: UBERON:0000063 ! organ segment
is_a: UBERON:0001021 ! nerve
relationship: branch_of UBERON:0001645 ! trigeminal nerve
xref: ncithesaurus:Ophthalmic_Nerve ! Ophthalmic Nerve

[Term]
id: UBERON:0000349
name: limbic system
alt_id: UBERON:BTO_0000928-FMA_242000
def: "A set of midline structures surrounding the brainstem of the mammalian brain, originally described anatomically, e.g., hippocampal formation, amygdala, hypothalamus, cingulate cortex. Although the original designation was anatomical, the limbic system has come to be associated with the system in the brain subserving emotional functions. As such, it is very poorly defined and doesn't correspond closely to the anatomical meaning any longer. [BirnLex]. including the hippocampus, amygdala, anterior thalamic nuclei, and limbic cortex, which support a variety of functions including emotion, behavior, long term memory, and olfaction [Wikipedia]." [BIRNLEX:Limbic_system]
comment: obsoletion recommended. The current part_of children were chosen as the intersection of what is stated in wikipedia and in the FMA. NIF: We are including Limbic System because it is still used by neuroscientists and others, but as a data annotation term, it is very poor because it is not a clearly defined entity.
xref: BTO:0000928
xref: FMA:242000 ! Limbic system
is_a: UBERON:0000477 ! anatomical cluster

[Term]
id: UBERON:0000351
name: nuchal ligament
alt_id: UBERON:BTO_0000952-FMA_13427
synonym: "Ligament of neck" EXACT [FMA:13427]
synonym: "Nuchal ligament" EXACT [FMA:13427]
xref: BTO:0000952
xref: FMA:13427 ! Ligamentum nuchae
is_a: UBERON:0000062 ! organ

[Term]
id: UBERON:0000353
name: parenchyma
alt_id: UBERON:BTO_0000999-FMA_45732
def: "functional part of an organ in the body. This is in contrast to the stroma, which refers to the structural tissue of organs, being exactly, connective tissues. Early in development the mammalian embryo has three distinct layers: ectoderm (external layer), endoderm (internal layer) and in between those two layers the middle layer or mesoderm. The parenchyma of most organs is of ectodermal (brain, skin) or endodermal origin (lungs, gastrointestinal tract, liver, pancreas). The parenchyma of a few organs (spleen, kidneys, heart) is of mesodermal origin. The stroma of all organs is of mesodermal origin[WP]." [Wikipedia:Parenchyma]
xref: BTO:0000999
xref: FMA:45732 ! Parenchyma
is_a: UBERON:0000064 ! organ part
xref: ncithesaurus:Parenchyma ! Parenchyma

[Term]
id: UBERON:0000355
name: pharyngeal mucosa
alt_id: UBERON:BTO_0001047-FMA_55031
synonym: "Mucous membrane of pharynx" EXACT [FMA:55031]
synonym: "Pharyngeal mucosa" EXACT [FMA:55031]
xref: BTO:0001047
xref: FMA:55031 ! Mucosa of pharynx
is_a: UBERON:0000064 ! organ part
intersection_of: UBERON:0000344 ! mucosa
intersection_of: OBO_REL:part_of UBERON:0001042 ! pharynx

[Term]
id: UBERON:0000358
name: blastocyst
alt_id: UBERON:BTO_0001099-FMA_83041
def: "The mammalian blastocyst is a hollow ball of cells containing two cell types, the inner cell mass and the trophectoderm[GO]." [GO:0001824]
synonym: "Blastula" EXACT [FMA:83041]
xref: BTO:0001099
xref: EFO:0000295
xref: FMA:83041 ! Blastocyst
is_a: UBERON:0002050 ! embryonic structure
relationship: has_part UBERON:0000087 ! inner cell mass
xref: OGEM:000006 ! blastula
xref: OGES:000021 ! blastula
xref: OGES:000016 ! blastula
xref: OGES:000003 ! Blastula
xref: ncithesaurus:Blastocyst ! Blastocyst

[Term]
id: UBERON:0000359
name: preputial gland
alt_id: UBERON:BTO_0001111-FMA_71652
synonym: "Preputial glands" EXACT [FMA:71652]
synonym: "Preputial glands set" EXACT [FMA:71652]
xref: BTO:0001111
xref: FMA:71652 ! Set of preputial glands
is_a: UBERON:0002530 ! gland
xref: ncithesaurus:Prepucial_Gland_MMHCC ! Preputial Gland

[Term]
id: UBERON:0000360
name: rectal gland
alt_id: UBERON:BTO_0001157-FMA_15724
xref: BTO:0001157
xref: FMA:15724 ! Rectal gland
is_a: UBERON:0002530 ! gland
intersection_of: UBERON:0002530 ! gland
intersection_of: OBO_REL:part_of UBERON:0001052 ! rectum

[Term]
id: UBERON:0000361
name: red bone marrow
alt_id: UBERON:BTO_0001160-FMA_74595
xref: BTO:0001160
xref: FMA:74595 ! Red bone marrow
is_a: UBERON:0002371 ! bone marrow

[Term]
id: UBERON:0000362
name: renal medulla
alt_id: UBERON:BTO_0001167-FMA_86327
synonym: "Renal medullae" EXACT [FMA:86327]
synonym: "Renal medullae set" EXACT [FMA:86327]
xref: BTO:0001167
xref: FMA:86327 ! Set of renal medullae
is_a: UBERON:0000061 ! anatomical structure
intersection_of: UBERON:0000958 ! medulla
intersection_of: OBO_REL:part_of UBERON:0002113 ! kidney
xref: ncithesaurus:Renal_Medulla ! Renal Medulla

[Term]
id: UBERON:0000363
name: reticuloendothelial system
alt_id: UBERON:BTO_0001174-FMA_84189
synonym: "Reticuloendothelial system" EXACT [FMA:84189]
xref: BTO:0001174
xref: FMA:84189 ! Mononuclear phagocyte system
is_a: UBERON:0000061 ! anatomical structure
xref: ncithesaurus:Reticuloendothelial_System ! Reticuloendothelial System

[Term]
id: UBERON:0000364
name: rootlet
alt_id: UBERON:BTO_0001192-FMA_76787
synonym: "Rootlets" EXACT [FMA:76787]
synonym: "Rootlets set" EXACT [FMA:76787]
xref: BTO:0001192
xref: FMA:76787 ! Set of rootlets
is_a: UBERON:0000061 ! anatomical structure

[Term]
id: UBERON:0000365
name: urothelium
alt_id: UBERON:BTO_0001245-FMA_67695
synonym: "Uroepithelium" EXACT [FMA:67695]
xref: BTO:0001245
xref: FMA:67695 ! Urothelium
is_a: UBERON:0000483 ! epithelium
xref: ncithesaurus:Urothelium ! Urothelium

[Term]
id: UBERON:0000366
name: flexor
alt_id: UBERON:BTO_0001257-FMA_74559
xref: BTO:0001257
xref: FMA:74559 ! Flexor
is_a: UBERON:0000061 ! anatomical structure

[Term]
id: UBERON:0000368
name: adductor brevis
alt_id: UBERON:BTO_0001288-FMA_22442
synonym: "Musculus adductos brevis" EXACT [FMA:22442]
xref: BTO:0001288
xref: FMA:22442 ! Adductor brevis
is_a: UBERON:0001630 ! muscle organ

[Term]
id: UBERON:0000369
name: corpus striatum
alt_id: UBERON:BTO_0001311-FMA_77616
xref: BTO:0001311
xref: EFO:0000381 ! corpus striatum
xref: FMA:77616 ! Corpus striatum
xref: HOG:0001175 ! corpus striatum
is_a: UBERON:0000061 ! anatomical structure
xref: ncithesaurus:Corpus_Striatum ! Corpus Striatum

[Term]
id: UBERON:0000370
name: adductor magnus
alt_id: UBERON:BTO_0001312-FMA_22443
xref: BTO:0001312
xref: FMA:22443 ! Adductor magnus
xref: galen:AdductorMagnus
is_a: UBERON:0001630 ! muscle organ

[Term]
id: UBERON:0000371
name: syncytiotrophoblast
alt_id: UBERON:BTO_0001335-FMA_83040
synonym: "Syncytiotrophoblast" EXACT [FMA:83040]
xref: BTO:0001335
xref: FMA:83040 ! Syncytial trophoblast
is_a: UBERON:0002050 ! embryonic structure
xref: ncithesaurus:Syncytiotrophoblast ! Syncytiotrophoblast

[Term]
id: UBERON:0000372
name: extensor digitorum brevis
alt_id: UBERON:BTO_0001337-FMA_51140
xref: BTO:0001337
xref: FMA:51140 ! Extensor digitorum brevis
is_a: UBERON:0001498 ! muscle of foot
is_a: UBERON:0001630 ! muscle organ

[Term]
id: UBERON:0000373
name: tapetum of corpus callosum
alt_id: UBERON:BTO_0001350-FMA_77208
def: "On either side of the corpus collosum, the fibers radiate in the white substance and pass to the various parts of the cerebral cortex; those curving forward from the genu into the frontal lobe constitute the forceps anterior, and those curving backward into the occipital lobe, the forceps posterior. Between these two parts is the main body of the fibers which constitute the tapetum and extend laterally on either side into the temporal lobe, and cover in the central part of the lateral ventricle. [Wikipedia via Greys]" [Wikipedia:Tapetum_of_corpus_callosum]
comment: not to be confused with BTO:0001350 or GO:0048655-tapetal layer morphogenesis
xref: FMA:77208 ! Tapetum
is_a: UBERON:0002316 ! white matter of neuraxis

[Term]
id: UBERON:0000374
name: thigh muscle
alt_id: UBERON:BTO_0001367-FMA_22470
synonym: "Thigh muscle" EXACT [FMA:22470]
xref: BTO:0001367
xref: FMA:22470 ! Muscle of thigh
is_a: UBERON:0001630 ! muscle organ

[Term]
id: UBERON:0000375
name: mandibular nerve
alt_id: UBERON:BTO_0001375-FMA_52996
synonym: "Inferior maxillary nerve" EXACT [FMA:52996]
synonym: "Mandibular division [V3]" EXACT [FMA:52996]
synonym: "Mandibular division [Vc]" EXACT [FMA:52996]
synonym: "Mandibular division of fifth cranial nerve" EXACT [FMA:52996]
synonym: "Mandibular division of trigeminal nerve [Vc; V3]" EXACT [FMA:52996]
synonym: "Mandibular nerve [V3]" EXACT [FMA:52996]
synonym: "Mandibular nerve [Vc]" EXACT [FMA:52996]
synonym: "Nervus mandibularis [Vc; V3]" EXACT [FMA:52996]
synonym: "Third division of fifth cranial nerve" EXACT [FMA:52996]
synonym: "Third division of trigeminal nerve" EXACT [FMA:52996]
xref: BTO:0001375
xref: FMA:52996 ! Mandibular nerve
is_a: UBERON:0000063 ! organ segment
is_a: UBERON:0001021 ! nerve
relationship: branch_of UBERON:0001645 ! trigeminal nerve
xref: ncithesaurus:Inferior_Maxillary_Nerve ! Inferior Maxillary Nerve

[Term]
id: UBERON:0000376
name: upper leg
alt_id: UBERON:BTO_0001376-FMA_24967
synonym: "Proximal segment of free lower limb" EXACT [FMA:24967]
synonym: "thigh" EXACT []
synonym: "stylopod of lower limb" EXACT []
xref: MA:0000052 ! upper leg
xref: BTO:0001376
xref: FMA:24967 ! Thigh
is_a: UBERON:0002472 ! stylopod
relationship: part_of UBERON:0002103 ! hindlimb
intersection_of: UBERON:0002472 ! stylopod
intersection_of: part_of UBERON:0002103 ! hindlimb
xref: ncithesaurus:Thigh ! Thigh

[Term]
id: UBERON:0003822
name: upper arm
synonym: "Proximal segment of free upper limb" EXACT []
synonym: "forearm" EXACT []
synonym: "stylopod of arm" EXACT []
is_a: UBERON:0002472 ! stylopod
relationship: part_of UBERON:0001460 ! arm
intersection_of: UBERON:0002472 ! stylopod
intersection_of: part_of UBERON:0001460 ! arm
xref: MA:0000035 ! upper arm
xref: ncithesaurus:Forearm ! Forearm
xref: BTO:0001447 ! forearm

[Term]
id: UBERON:0002386
name: lower segment of arm
alt_id: UBERON:FMA_9663-MA_0000034
def: "." [Wikipedia:Forearm]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Antebrachial region" EXACT []
synonym: "antebrachial region" EXACT []
synonym: "zeugopod of arm" EXACT []
synonym: "Intermediate segment of free upper limb" EXACT []
synonym: "intermediate segment of free upper limb" EXACT []
synonym: "lower arm" EXACT []
synonym: "forearm" EXACT []
xref: EHDAA:4172 ! forearm
xref: EHDAA:6218 ! forearm
xref: FMA:9663 ! Forearm
xref: GAID:55 ! forearm
xref: galen:Forearm
xref: MA:0000034 ! lower arm
xref: OpenCyc:Mx4rvVjnmpwpEbGdrcN5Y29ycA
is_a: UBERON:0002471 ! zeugopod
relationship: part_of UBERON:0001460 ! arm
intersection_of: UBERON:0002471 ! zeugopod
intersection_of: part_of UBERON:0001460 ! arm
xref: ncithesaurus:Forearm ! Forearm
xref: BTO:0001447 ! forearm

[Term]
id: UBERON:0003823
name: lower leg
synonym: "zeugopod of leg" EXACT []
synonym: "intermediate segment of free lower limb" EXACT []
synonym: "calf" NARROW []
is_a: UBERON:0002471 ! zeugopod
relationship: part_of UBERON:0002103 ! hindlimb
intersection_of: UBERON:0002471 ! zeugopod
intersection_of: part_of UBERON:0002103 ! hindlimb
xref: MA:0000051 ! lower leg

[Term]
id: UBERON:0002472 ! stylopod
name: stylopod
alt_id: UBERON:MA_0002717-MIAA_0000093
def: "Limb segment that is the proximal part of the limb (e.g. between shoulder and elbow)." []
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "proximal part of limb" BROAD []
xref: EFO:0000879 ! stylopod
xref: MA:0002717 ! stylopod
xref: MAT:0000093 ! stylopod
xref: MIAA:0000093 ! stylopod
is_a: UBERON:0002529 ! limb segment
relationship: part_of UBERON:0002101 ! limb

[Term]
id: UBERON:0002471 ! zeugopod
name: zeugopod
alt_id: UBERON:MA_0002716-MIAA_0000092
def: "The middle part of the limb (e.g. between the elbow and wrist)" []
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "middle part of limb" BROAD []
synonym: "middle limb segment" EXACT []
xref: EFO:0000878 ! zeugopod
xref: MA:0002716 ! zeugopod
xref: MAT:0000092 ! zeugopod
xref: MIAA:0000092 ! zeugopod
is_a: UBERON:0002529 ! limb segment
relationship: part_of UBERON:0002101 ! limb

[Term]
id: UBERON:0000377
name: maxillary nerve
alt_id: UBERON:BTO_0001378-FMA_52724
synonym: "Maxillary division [V2]" EXACT [FMA:52724]
synonym: "Maxillary division [Vb]" EXACT [FMA:52724]
synonym: "Maxillary division of fifth cranial nerve" EXACT [FMA:52724]
synonym: "Maxillary division of trigeminal nerve (Vb; V2)" EXACT [FMA:52724]
synonym: "Maxillary nerve [V2]" EXACT [FMA:52724]
synonym: "Maxillary nerve [Vb]" EXACT [FMA:52724]
synonym: "Nervus maxillaris (Vb; V2)" EXACT [FMA:52724]
synonym: "Second division of fifth cranial nerve" EXACT [FMA:52724]
synonym: "Second division of trigeminal nerve" EXACT [FMA:52724]
xref: BTO:0001378
xref: FMA:52724 ! Maxillary nerve
is_a: UBERON:0000063 ! organ segment
is_a: UBERON:0001021 ! nerve
relationship: branch_of UBERON:0001645 ! trigeminal nerve

[Term]
id: UBERON:0000378
name: tongue muscle
alt_id: UBERON:BTO_0001386-FMA_46689
synonym: "Tongue muscle" EXACT [FMA:46689]
xref: BTO:0001386
xref: FMA:46689 ! Muscle of tongue
is_a: UBERON:0002376 ! muscle of head
relationship: part_of UBERON:0001723 ! tongue
xref: ncithesaurus:Tongue_Muscle ! Tongue Muscle

[Term]
id: UBERON:0000379
name: tracheal mucosa
alt_id: UBERON:BTO_0001390-FMA_7471
synonym: "Mucous membrane of trachea" EXACT [FMA:7471]
synonym: "Tracheal mucosa" EXACT [FMA:7471]
synonym: "Tracheal mucous membrane" EXACT [FMA:7471]
synonym: "Tunica mucosa (tracheae)" EXACT [FMA:7471]
xref: BTO:0001390
xref: FMA:7471 ! Mucosa of trachea
is_a: UBERON:0000064 ! organ part
intersection_of: UBERON:0000344 ! mucosa
intersection_of: OBO_REL:part_of UBERON:0001005 ! trachea

[Term]
id: UBERON:0000380
name: tuber
alt_id: UBERON:BTO_0001400-FMA_75430
xref: BTO:0001400
xref: FMA:75430 ! Tuber
is_a: UBERON:0000064 ! organ part

[Term]
id: UBERON:0000381
name: detrusor
alt_id: UBERON:BTO_0001453-FMA_68018
xref: BTO:0001453
xref: FMA:68018 ! Detrusor
is_a: UBERON:0000064 ! organ part

[Term]
id: UBERON:0000382
name: apocrine sweat gland
alt_id: UBERON:BTO_0001458-FMA_59155
xref: BTO:0001458
xref: FMA:59155 ! Apocrine sweat gland
is_a: UBERON:0001820 ! sweat gland
relationship: constitutional_part_of UBERON:0001003 ! epidermis
xref: ncithesaurus:Apocrine_Sweat_Gland ! Apocrine Sweat Gland

[Term]
id: UBERON:0000383
name: muscular system
alt_id: UBERON:BTO_0001485-FMA_72954
synonym: "Set of all muscles" EXACT [FMA:72954]
synonym: "Set of muscles of body" EXACT [FMA:72954]
xref: BTO:0001485
xref: EFO:0000801 ! muscular system
xref: FMA:72954 ! Muscular system
is_a: UBERON:0001015 ! muscle system
relationship: constitutional_part_of UBERON:0002204 ! musculoskeletal system
relationship: systemic_part_of UBERON:0002204 ! musculoskeletal system

[Term]
id: UBERON:0000385
name: labial gland
alt_id: UBERON:BTO_0001548-FMA_71613
synonym: "Labial glands" EXACT [FMA:71613]
synonym: "Labial glands set" EXACT [FMA:71613]
xref: BTO:0001548
xref: FMA:71613 ! Set of labial glands
xref: HAO:0000449 ! labial gland
is_a: UBERON:0002530 ! gland

[Term]
id: UBERON:0000387
name: meniscus
alt_id: UBERON:BTO_0001592-FMA_76690
def: "crescent-shaped fibrocartilaginous structure present in the knee, acromioclavicular, sternoclavicular, and temporomandibular joints[2] that, in contrast to articular disks, only partly divides a joint cavity.[3] A small meniscus also occurs in the radio-carpal joint." [Wikipedia:Meniscus_(anatomy)]
synonym: "Meniscus" EXACT [FMA:76690]
xref: BTO:0001592
xref: FMA:76690 ! Articular disc
is_a: UBERON:0000061 ! anatomical structure
xref: ncithesaurus:Meniscus ! Meniscus

[Term]
id: UBERON:0000388
name: epiglottis
alt_id: UBERON:BTO_0001628-FMA_55130
xref: BTO:0001628
xref: FMA:55130 ! Epiglottis
is_a: UBERON:0000477 ! anatomical cluster
relationship: systemic_part_of UBERON:0001051 ! hypopharynx
xref: ncithesaurus:Epiglottis ! Epiglottis

[Term]
id: UBERON:0000389
name: lens cortex
alt_id: UBERON:BTO_0001632-FMA_58970
synonym: "Lens cortex" EXACT [FMA:58970]
xref: BTO:0001632
xref: FMA:58970 ! Cortex of lens
is_a: UBERON:0001851 ! cortex
relationship: part_of UBERON:0000965 ! lens

[Term]
id: UBERON:0000390
name: lens nucleus
alt_id: UBERON:BTO_0001633-FMA_58971
synonym: "Lens nucleus" EXACT [FMA:58971]
xref: BTO:0001633
xref: FMA:58971 ! Nucleus of lens
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0000965 ! lens

[Term]
id: UBERON:0000391
name: leptomeninx
alt_id: UBERON:BTO_0001634-FMA_231515
xref: BTO:0001634
xref: FMA:231515 ! Leptomeninx
is_a: UBERON:0002360 ! meninx

[Term]
id: UBERON:0000392
name: longissimus
alt_id: UBERON:BTO_0001648-FMA_77178
xref: BTO:0001648
xref: FMA:77178 ! Longissimus
is_a: UBERON:0001630 ! muscle organ

[Term]
id: UBERON:0000395
name: cochlear ganglion
alt_id: UBERON:BTO_0001688-FMA_53445
synonym: "Corti's ganglion" EXACT [FMA:53445]
synonym: "Ganglion of Corti" EXACT [FMA:53445]
synonym: "Spiral ganglion" EXACT [FMA:53445]
xref: BTO:0001688
xref: FMA:53445 ! Cochlear ganglion
is_a: UBERON:0001714 ! ganglion of cranial nerve

[Term]
id: UBERON:0000396
name: vallate papilla
alt_id: UBERON:BTO_0001705-FMA_71449
synonym: "Vallate papillae" EXACT [FMA:71449]
synonym: "Vallate papillae set" EXACT [FMA:71449]
xref: BTO:0001705
xref: FMA:71449 ! Set of vallate papillae
is_a: UBERON:0000061 ! anatomical structure

[Term]
id: UBERON:0000397
name: colonic epithelium
alt_id: UBERON:BTO_0001709-FMA_17302
synonym: "Colon epithelium" EXACT [FMA:17302]
synonym: "Colonic epithelium" EXACT [FMA:17302]
xref: BTO:0001709
xref: FMA:17302 ! Epithelium of colon
xref: ZFA:0005128 ! posterior intestine epithelium
is_a: UBERON:0000483 ! epithelium
intersection_of: UBERON:0000483 ! epithelium
intersection_of: OBO_REL:part_of UBERON:0001155 ! colon

[Term]
id: UBERON:0000398
name: sternal cartilage
alt_id: UBERON:BTO_0001721-FMA_32567
synonym: "Sternal cartilage" EXACT [FMA:32567]
xref: BTO:0001721
xref: FMA:32567 ! Cartilage of sternum
is_a: UBERON:0002384 ! connective tissue

[Term]
id: UBERON:0000399
name: jejunal mucosa
alt_id: UBERON:BTO_0001742-FMA_14949
synonym: "Jejunal mucosa" EXACT [FMA:14949]
synonym: "Jejunal mucous membrane" EXACT [FMA:14949]
synonym: "Jejunum mucosa" EXACT [FMA:14949]
xref: BTO:0001742
xref: FMA:14949 ! Mucosa of jejunum
is_a: UBERON:0000064 ! organ part
intersection_of: UBERON:0000344 ! mucosa
intersection_of: OBO_REL:part_of UBERON:0002115 ! jejunum

[Term]
id: UBERON:0000400
name: jejunal epithelium
alt_id: UBERON:BTO_0001743-FMA_17232
xref: BTO:0001743
xref: FMA:17232 ! Jejunal epithelium
is_a: UBERON:0000483 ! epithelium

[Term]
id: UBERON:0000401
name: mandibular ramus
alt_id: UBERON:BTO_0001751-FMA_52828
synonym: "Mandibular ramus" EXACT [FMA:52828]
xref: BTO:0001751
xref: FMA:52828 ! Ramus of mandible
is_a: UBERON:0000064 ! organ part

[Term]
id: UBERON:0000402
name: nasal vestibule
alt_id: UBERON:BTO_0001761-FMA_59644
synonym: "Vestibular part of nasal cavity" EXACT [FMA:59644]
xref: BTO:0001761
xref: FMA:59644 ! Nasal vestibule
is_a: UBERON:0002553 ! anatomical cavity

[Term]
id: UBERON:0000403
name: scalp
alt_id: UBERON:BTO_0001809-FMA_46494
xref: BTO:0001809
xref: FMA:46494 ! Scalp
is_a: UBERON:0000477 ! anatomical cluster

[Term]
id: UBERON:0000407
name: sympathetic chain
alt_id: UBERON:BTO_0001834-FMA_6258
synonym: "Sympathetic chain" EXACT [FMA:6258]
xref: BTO:0001834
xref: FMA:6258 ! Sympathetic trunk
is_a: UBERON:0000062 ! organ
relationship: systemic_part_of UBERON:0000013 ! sympathetic nervous system

[Term]
id: UBERON:0000408
name: vertebral ganglion
alt_id: UBERON:BTO_0001835-FMA_6572
synonym: "Intermediate ganglion" EXACT [FMA:6572]
xref: BTO:0001835
xref: FMA:6572 ! Vertebral ganglion
is_a: UBERON:0000063 ! organ segment
relationship: part_of UBERON:0001991 ! cervical ganglion

[Term]
id: UBERON:0000409
name: serous gland
alt_id: UBERON:BTO_0001837-FMA_62889
xref: BTO:0001837
xref: FMA:62889 ! Serous gland
is_a: UBERON:0000064 ! organ part
is_a: UBERON:0002365 ! exocrine gland

[Term]
id: UBERON:0000410
name: bronchial mucosa
alt_id: UBERON:BTO_0001846-FMA_62652
synonym: "Bronchial mucosa" EXACT [FMA:62652]
synonym: "Mucous membrane of bronchus" EXACT [FMA:62652]
xref: BTO:0001846
xref: FMA:62652 ! Mucosa of bronchus
is_a: UBERON:0000064 ! organ part
intersection_of: UBERON:0000344 ! mucosa
intersection_of: OBO_REL:part_of UBERON:0002185 ! bronchus

[Term]
id: UBERON:0000411
name: visual cortex
alt_id: UBERON:BTO_0001857-FMA_242644
def: "Area including V1 and extrastriate visual cortical areas such as V2, V3, V4, and V5." [Wikipedia:Visual_cortex]
synonym: "V1" EXACT [Wikipedia:Visual_cortex]
xref: BTO:0001857
xref: EFO:0000916 ! visual cortex
xref: FMA:242644 ! Visual cortex
is_a: UBERON:0003208 ! region of cerebral cortex

[Term]
id: UBERON:0000412
name: dermal papilla
alt_id: UBERON:BTO_0001858-FMA_70737
synonym: "Follicular papilla" EXACT [FMA:70737]
xref: BTO:0001858
xref: FMA:70737 ! Dermal papilla
is_a: UBERON:0000061 ! anatomical structure

[Term]
id: UBERON:0000414
name: mucous gland
alt_id: UBERON:BTO_0001979-FMA_62888
xref: BTO:0001979
xref: FMA:62888 ! Mucous gland
is_a: UBERON:0000064 ! organ part
is_a: UBERON:0002365 ! exocrine gland

[Term]
id: UBERON:0000415
name: artery wall
alt_id: UBERON:BTO_0002009-FMA_14155
synonym: "Arterial wall" EXACT [FMA:14155]
xref: BTO:0002009
xref: FMA:14155 ! Wall of artery
xref: galen:ArterialWall
is_a: UBERON:0000064 ! organ part
intersection_of: UBERON:0000060 ! wall
intersection_of: OBO_REL:part_of UBERON:0001637 ! artery

[Term]
id: UBERON:0000416
name: subdural space
alt_id: UBERON:BTO_0002082-FMA_83803
xref: BTO:0002082
xref: FMA:83803 ! Subdural space
is_a: UBERON:0000464 ! anatomical space

[Term]
id: UBERON:0000417
name: primitive endoderm
alt_id: UBERON:BTO_0002123-FMA_85520
xref: BTO:0002123
xref: FMA:85520 ! Primitive endoderm
is_a: UBERON:0000925 ! endoderm

[Term]
id: UBERON:0000418
name: tubercle
alt_id: UBERON:BTO_0002173-FMA_75429
is_obsolete: true

[Term]
id: UBERON:0000420
name: myoepithelium
alt_id: UBERON:BTO_0002308-FMA_67805
synonym: "Myoepithelium" EXACT [FMA:67805]
xref: BTO:0002308
xref: FMA:67805 ! Myo-epithelium
is_a: UBERON:0000488 ! atypical epithelium

[Term]
id: UBERON:0000423
name: eccrine sweat gland
alt_id: UBERON:BTO_0002323-FMA_59154
synonym: "Eccrine gland" EXACT [FMA:59154]
xref: BTO:0002323
xref: FMA:59154 ! Eccrine sweat gland
is_a: UBERON:0001820 ! sweat gland
relationship: constitutional_part_of UBERON:0001003 ! epidermis
xref: ncithesaurus:Eccrine_Sweat_Gland ! Eccrine Sweat Gland

[Term]
id: UBERON:0000424
name: gastric pit
alt_id: UBERON:BTO_0002364-FMA_62947
alt_id: UBERON:0000425
synonym: "Gastric pit" EXACT [FMA:62947]
xref: BTO:0002364
xref: FMA:62947 ! Gastric foveola
is_a: UBERON:0002553 ! anatomical cavity
xref: ncithesaurus:Gastric_Pit ! Gastric Pit

[Term]
id: UBERON:0000426
name: extravillous trophoblast
alt_id: UBERON:BTO_0002366-FMA_86561
synonym: "Extravillous trophoblast" EXACT [FMA:86561]
xref: BTO:0002366
xref: FMA:86561 ! Intermediate trophoblast
is_a: UBERON:0002050 ! embryonic structure

[Term]
id: UBERON:0000427
name: cytotrophoblastic cell
alt_id: UBERON:BTO_0002367-FMA_83039
synonym: "Cellular trophoblast" EXACT [FMA:83039]
synonym: "Cytotrophoblastic cell" EXACT [FMA:83039]
xref: BTO:0002367
xref: FMA:83039 ! Cytotrophoblast
is_a: UBERON:0002050 ! embryonic structure
xref: ncithesaurus:Cytotrophoblastic_Cell ! Cytotrophoblastic Cell

[Term]
id: UBERON:0000428
name: prostate epithelium
alt_id: UBERON:BTO_0002397-FMA_66812
xref: BTO:0002397
xref: FMA:66812 ! Prostatic epithelium
is_a: UBERON:0000485 ! simple columnar epithelium
intersection_of: UBERON:0000483 ! epithelium
intersection_of: OBO_REL:part_of UBERON:0002367 ! prostate
xref: ncithesaurus:Prostatic_Epithelium ! Prostatic Epithelium

[Term]
id: UBERON:0000429
name: enteric plexus
alt_id: UBERON:BTO_0002437-FMA_77597
synonym: "Enteric nerve plexus" EXACT [FMA:77597]
synonym: "Sympathetic enteric nerve plexus" EXACT [FMA:77597]
xref: BTO:0002437
xref: FMA:77597 ! Enteric plexus
is_a: UBERON:0001816 ! autonomic nerve plexus

[Term]
id: UBERON:0000430
name: ventral intermediate nucleus of thalamus
alt_id: UBERON:BTO_0002469-FMA_84347
xref: BTO:0002469
xref: FMA:84347 ! Ventral intermediate nucleus of thalamus
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0000431
name: ventral medial complex of thalamus
alt_id: UBERON:BTO_0002470-FMA_77795
synonym: "Ventral medial complex of thalamus" EXACT [FMA:77795]
synonym: "Ventral medial nuclei of thalamus" EXACT [FMA:77795]
xref: BTO:0002470
xref: FMA:77795 ! Set of ventral medial nuclei of thalamus
is_a: UBERON:0000061 ! anatomical structure

[Term]
id: UBERON:0000432
name: endopeduncular nucleus
alt_id: UBERON:BTO_0002475-FMA_77691
xref: BTO:0002475
xref: FMA:77691 ! Endopeduncular nucleus
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0000433
name: posterior paraventricular nucleus of thalamus
alt_id: UBERON:BTO_0002477-FMA_76961
synonym: "Posterior paraventricular nucleus of thalamus" EXACT [FMA:76961]
xref: BTO:0002477
xref: FMA:76961 ! Dorsal paraventricular nucleus of thalamus
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0000434
name: anterior paraventricular nucleus of thalamus
alt_id: UBERON:BTO_0002478-FMA_76962
synonym: "Anterior paraventricular nucleus of thalamus" EXACT [FMA:76962]
xref: BTO:0002478
xref: FMA:76962 ! Ventral paraventricular nucleus of thalamus
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0000435
name: lateral tuberal nucleus
alt_id: UBERON:BTO_0002481-FMA_62336
synonym: "Lateral tuberal hypothalamic nuclei" EXACT [FMA:62336]
synonym: "Lateral tuberal nuclei" EXACT [FMA:62336]
xref: BTO:0002481
xref: FMA:62336 ! Lateral tuberal nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0002430 ! lateral hypothalamic area

[Term]
id: UBERON:0000437
name: arachnoid barrier layer
alt_id: UBERON:BTO_0002498-FMA_231559
xref: BTO:0002498
xref: FMA:231559 ! Arachnoid barrier layer
is_a: UBERON:0000064 ! organ part
relationship: constitutional_part_of UBERON:0002362 ! arachnoid mater

[Term]
id: UBERON:0000438
name: set of arachnoid trabecula
alt_id: UBERON:BTO_0002500-FMA_77761
synonym: "Arachnoid trabeculae set" EXACT [FMA:77761]
xref: BTO:0002500
xref: FMA:77761 ! Set of arachnoid trabeculae
is_a: UBERON:0000061 ! anatomical structure
relationship: has_part UBERON:0000439 ! arachnoid trabecula

[Term]
id: UBERON:0000439
name: arachnoid trabecula
alt_id: UBERON:BTO_0002500-FMA_83979
def: "a small, often microscopic, tissue element in the form of a small beam, strut or rod, generally having a mechanical function, and usually but not necessarily composed of dense collagenous tissue." [GO:0060343]
xref: BTO:0002500
xref: FMA:83979 ! Arachnoid trabecula
is_a: UBERON:0000440 ! trabecula
relationship: constitutional_part_of UBERON:0002362 ! arachnoid mater

[Term]
id: UBERON:0000440
name: trabecula
def: "A small, often microscopic, tissue element in the form of a small beam, strut or rod, generally having a mechanical function, and usually but not necessarily composed of dense collagenous tissue. On histological section, a trabecula can look like a septum, but in three dimensions they are topologically distinct, with trabeculae being roughly rod or pillar-shaped and septa being sheet-like.. Trabeculae are usually composed of dense fibrous tissue, i.e. mainly of collagen, and in most cases provide mechanical strengthening or stiffening to a soft solid organ, such as the spleen. They can be composed of other materials, such as bone or muscle[WP]." [Wikipedia:Trabecula]
alt_id: UBERON:BTO_0002501-FMA_85273
xref: BTO:0002501
xref: FMA:85273 ! Trabecula
is_a: UBERON:0000064 ! organ part
xref: ZFA:0001321 ! neurocranial trabecula

[Term]
id: UBERON:0000442
name: right testicular vein
alt_id: UBERON:BTO_0002679-FMA_14341
synonym: "Vena testicularis (adrenalis) dextra" EXACT [FMA:14341]
xref: BTO:0002679
xref: FMA:14341 ! Right testicular vein
is_a: UBERON:0001144 ! testicular vein

[Term]
id: UBERON:0000443
name: left testicular vein
alt_id: UBERON:BTO_0002680-FMA_14345
xref: BTO:0002680
xref: FMA:14345 ! Left testicular vein
is_a: UBERON:0001144 ! testicular vein

[Term]
id: UBERON:0000444
name: lymphoid follicle
alt_id: UBERON:BTO_0002684-FMA_55222
synonym: "Lymphoid follicle" EXACT [FMA:55222]
synonym: "Lymphoid nodule" EXACT [FMA:55222]
xref: BTO:0002684
xref: FMA:55222 ! Nodular lymphoid tissue
is_a: UBERON:0001744 ! lymphoid tissue
xref: ncithesaurus:Lymphoid_Follicle ! Lymphoid Follicle

[Term]
id: UBERON:0000445
name: habenular trigone
alt_id: UBERON:BTO_0002700-FMA_74868
xref: BTO:0002700
xref: FMA:74868 ! Habenular trigone
is_a: UBERON:0000477 ! anatomical cluster

[Term]
id: UBERON:0000446
name: septum of telencephalon
alt_id: UBERON:BTO_0002705-FMA_61842
def: "Subdivision of the telencephalon on the midline between the lateral ventricles which contains the septum pellucidum and the septal nuclei[FMA]." [FMA:61842]
synonym: "septal area" EXACT [FMA:61842]
synonym: "septum (NN)" EXACT [FMA:61842]
synonym: "telencephalon septum" EXACT [FMA:61842]
xref: BTO:0002705
xref: FMA:61842 ! Septum of telencephalon
is_a: UBERON:0000477 ! anatomical cluster
relationship: part_of UBERON:0001893 ! telencephalon

[Term]
id: UBERON:0000449
name: decidual cell
alt_id: UBERON:BTO_0002770-FMA_86480
xref: BTO:0002770
xref: FMA:86480 ! Decidual cell
is_a: UBERON:0000478 ! extraembryonic structure
xref: ncithesaurus:Decidual_Cell ! Decidual Cell

[Term]
id: UBERON:0000450
name: corpus albicans
alt_id: UBERON:BTO_0002784-FMA_18620
synonym: "Corpus albicans of ovary" EXACT [FMA:18620]
xref: BTO:0002784
xref: FMA:18620 ! Corpus albicans
is_a: UBERON:0000064 ! organ part

[Term]
id: UBERON:0000451
name: prefrontal cortex
alt_id: UBERON:BTO_0002807-FMA_224850
synonym: "Prefrontal association cortex" EXACT [FMA:224850]
xref: BTO:0002807
xref: FMA:224850 ! Prefrontal cortex
is_a: UBERON:0000064 ! organ part

[Term]
id: UBERON:0000452
name: gubernaculum testis
alt_id: UBERON:BTO_0002813-FMA_20421
xref: BTO:0002813
xref: FMA:20421 ! Gubernaculum testis
is_a: UBERON:0000061 ! anatomical structure

[Term]
id: UBERON:0000453
name: decidua basalis
alt_id: UBERON:BTO_0002819-FMA_86477
xref: BTO:0002819
xref: FMA:86477 ! Decidua basalis
is_a: UBERON:0000478 ! extraembryonic structure
xref: MA:0002905 ! decidua basalis
xref: ncithesaurus:Decidua_Basalis ! Decidua Basalis

[Term]
id: UBERON:0000454
name: cerebral subcortex
alt_id: UBERON:BTO_0002858-FMA_242188
synonym: "Cerebral medulla" EXACT [FMA:242188]
xref: BTO:0002858
xref: FMA:242188 ! Cerebral subcortex
is_a: UBERON:0000064 ! organ part

[Term]
id: UBERON:0000456
name: secretion
alt_id: UBERON:BTO_0002979-FMA_9675
xref: BTO:0002979
xref: FMA:9675 ! Secretion
is_a: UBERON:0000463 ! portion of organism substance

[Term]
id: UBERON:0000457
name: cavernous artery
alt_id: UBERON:BTO_0002996-FMA_70527
synonym: "Cavernous branch of cavernous part of internal carotid artery" EXACT [FMA:70527]
xref: BTO:0002996
xref: FMA:70527 ! Cavernous artery
is_a: UBERON:0000063 ! organ segment
is_a: UBERON:0001637 ! artery

[Term]
id: UBERON:0000458
name: endocervix
alt_id: UBERON:BTO_0003002-FMA_86485
xref: BTO:0003002
xref: FMA:86485 ! Endocervix
xref: ncithesaurus:Endocervix
is_a: UBERON:0000063 ! organ segment

[Term]
id: UBERON:0000459
name: uterine wall
alt_id: UBERON:BTO_0003083-FMA_17560
synonym: "Uterine wall" EXACT [FMA:17560]
xref: BTO:0003083
xref: FMA:17560 ! Wall of uterus
is_a: UBERON:0000064 ! organ part
intersection_of: UBERON:0000060 ! wall
intersection_of: OBO_REL:part_of UBERON:0000995 ! uterus
relationship: constitutional_part_of UBERON:0000995 ! uterus

[Term]
id: UBERON:0000460
name: major vestibular gland
alt_id: UBERON:BTO_0003115-FMA_9598
def: "Gland found in pairs located slightly below and to the left and right of the opening of the vagina in women. Bartholin's glands are homologous to bulbourethral glands in males. However, while Bartholin's glands are located in the superficial perineal pouch, bulbourethral glands are located in the deep perineal pouch. They secrete mucus to provide vaginal lubrication." [Wikipedia:Bartholin's_glands]
synonym: "Bartholin's gland" EXACT [FMA:9598]
synonym: "Duverney's gland" EXACT [FMA:9598]
synonym: "Major vestibular gland" EXACT [FMA:9598]
synonym: "Tiedemann's gland" EXACT [FMA:9598]
synonym: "Vulvovaginal gland" EXACT [FMA:9598]
xref: BTO:0003115
xref: FMA:9598 ! Greater vestibular gland
is_a: UBERON:0002530 ! gland
relationship: systemic_part_of UBERON:0002416 ! integumental system

[Term]
id: UBERON:0000461
name: minor vestibular gland
alt_id: UBERON:BTO_0003116-FMA_20019
synonym: "Glandula vestibular minor" EXACT [FMA:20019]
synonym: "Minor vestibular gland" EXACT [FMA:20019]
xref: BTO:0003116
xref: FMA:20019 ! Lesser vestibular gland
is_a: UBERON:0002530 ! gland

[Term]
id: UBERON:0000462
name: villus
is_obsolete: true

[Term]
id: UBERON:0000463
name: portion of organism substance
alt_id: UBERON:CARO_0000004-FBbt_00007019
def: "Material anatomical entity in a gaseous, liquid, semisolid or solid state; produced by anatomical structures or derived from inhaled and ingested substances that have been modified by anatomical structures as they pass through the body." [CARO:MAH]
comment: This class was created automatically from a combination of ontologies
xref: BILA:0000004
xref: CARO:0000004 ! portion of organism substance
xref: FBbt:00007019 ! portion of organism substance
xref: HAO:0000004 ! portion of organism substance
xref: ZFA:0001487 ! portion of organism substance
is_a: UBERON:0000465 ! material anatomical entity
disjoint_from: UBERON:0000061 ! anatomical structure

[Term]
id: UBERON:0000464
name: anatomical space
alt_id: UBERON:CARO_0000005-FBbt_00007017-FMA_5897-ZFA_0001643
def: "Non-material anatomical entity of three dimensions, that is generated by morphogenetic or other physiologic processes; is surrounded by one or more anatomical structures; contains one or more organism substances or anatomical structures. // Non-material physical anatomical entity of three dimensions, which is generated by morphogenetic or other physiologic processes; is surrounded by one or more anatomical structures; contains one or more body substances or anatomical structures. Examples: celom, thoracic cavity, lesser sac of peritoneum, cavity of right atrium, lumen of aorta, mediastinum, anterior compartment of forearm, intervertebral foramen. // Non-material anatomical entity of three dimensions, that is generated by morphogenetic or other physiologic processes; is surrounded by one or more anatomical structures; contains one or more organism substances or anatomical structures." [CARO:MAH, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
synonym: "Anatomical space" EXACT []
xref: BILA:0000005
xref: CARO:0000005 ! anatomical space
xref: FBbt:00007017 ! anatomical space
xref: FMA:5897 ! Anatomical space
xref: HAO:0000005 ! anatomical space
xref: TAO:0001668 ! anatomical space
xref: ZFA:0001643 ! anatomical space
is_a: UBERON:0000466 ! immaterial anatomical entity
relationship: surrounded_by UBERON:0000061 ! anatomical structure

[Term]
id: UBERON:0000465
name: material anatomical entity
alt_id: UBERON:CARO_0000006-FBbt_00007016-FMA_67165-ZFA_0001487
def: "Anatomical entity that has mass. // Physical anatomical entity which has mass. Examples: hemoglobin molecule, mitochondrion, hepatocyte, erythrocyte, heart, head, blood, urine. // Material anatomical entity in a gaseous, liquid, semisolid or solid state; produced by anatomical structures or derived from inhaled and ingested substances that have been modified by anatomical structures as they pass through the body." [CARO:MAH, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
synonym: "Material anatomical entity" EXACT []
xref: BILA:0000006
xref: CARO:0000006 ! material anatomical entity
xref: FBbt:00007016 ! material anatomical entity
xref: FMA:67165 ! Material anatomical entity
xref: HAO:0000006 ! material anatomical entity
xref: TAO:0001836 ! material anatomical entity
is_a: UBERON:0001062 ! anatomical entity

[Term]
id: UBERON:0000466
name: immaterial anatomical entity
alt_id: UBERON:CARO_0000007-FBbt_00007015
def: "Anatomical entity that has no mass." [CARO:MAH]
comment: This class was created automatically from a combination of ontologies
xref: BILA:0000007
xref: CARO:0000007 ! immaterial anatomical entity
xref: FBbt:00007015 ! immaterial anatomical entity
xref: HAO:0000007 ! immaterial anatomical entity
is_a: UBERON:0001062 ! anatomical entity
disjoint_from: UBERON:0000465 ! material anatomical entity
xref: FMA:67112 ! Immaterial anatomical entity

[Term]
id: UBERON:0000467
name: anatomical system
alt_id: UBERON:CARO_0000011-XAO_0003002-ZFA_0001439
alt_id: UBERON:FBbt_00004856-FBbt_00004969-FMA_7149-FMA_72979-MA_0000003-MA_0000014-MIAA_0000033-WBbt_0005730-XAO_0000176
def: "Anatomical group that is has as its parts distinct anatomical structures interconnected by anatomical structures at a lower level of granularity[CARO]. A group of organs that work together to perform a certain task [Wikipedia]." [CARO:0000011, CARO:MAH, Wikipedia:Organ_system, ZFIN:curator]
subset: uberon_slim
synonym: "Organ system" EXACT []
synonym: "organ system" EXACT []
xref: AAO:0000007 ! anatomical_system
xref: BILA:0000011
xref: CARO:0000011 ! anatomical system
xref: EHDAA:392 ! organ system
xref: FBbt:00004856 ! organ system
xref: FMA:7149 ! Organ system
xref: galen:AnatomicalSystem
xref: HAO:0000011 ! anatomical system
xref: MA:0000003 ! organ system
xref: TAO:0001439 ! anatomical system
xref: XAO:0003002 ! anatomical system
xref: ZFA:0001439 ! anatomical system
is_a: UBERON:0000480 ! anatomical group
xref: ncithesaurus:Organ_System ! Organ System

[Term]
id: UBERON:0000468
name: multi-cellular organism
alt_id: UBERON:CARO_0000012-XAO_0003004
def: "Anatomical structure that is an individual member of a species and consists of more than one cell. // Anatomical structure that is an individual member of Xenopus laevis." [CARO:0000012, CARO:MAH, Wikipedia:Multi-cellular_organism]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "whole organism" EXACT []
synonym: "body" RELATED []
xref: BILA:0000012
xref: CARO:0000012 ! multi-cellular organism
xref: HAO:0000012 ! multi-cellular organism
xref: TAO:0001094 ! body
xref: XAO:0003004 ! whole organism
xref: ZFA:0001094 ! whole organism
xref: FMA:256133 ! body of vertebrate
is_a: UBERON:0000061 ! anatomical structure
xref: ncithesaurus:Whole_Organism ! Whole Organism

[Term]
id: UBERON:0000470
name: cell part
alt_id: UBERON:CARO_0000014-FBbt_00007012-FMA_86454
def: "Anatomical structure that is a direct part of the cell." [CARO:MAH]
comment: This class was created automatically from a combination of ontologies
synonym: "cell component" EXACT []
xref: BILA:0000014
xref: CARO:0000014 ! cell component
xref: FBbt:00007012 ! cell component
xref: FMA:86454 ! Cell component
xref: GO:0044464
xref: HAO:0000014 ! cell component
is_a: UBERON:0000061 ! anatomical structure
intersection_of: UBERON:0000061 ! anatomical structure
intersection_of: part_of CL:0000000 ! cell
disjoint_from: CL:0000000 ! cell
relationship: part_of CL:0000000 ! cell
xref: ncithesaurus:Cell_Part ! Cell Part

[Term]
id: UBERON:0000471
name: compound organ component
alt_id: UBERON:CARO_0000019-XAO_0003039-ZFA_0001489
def: "Multi-tissue structure that is part of a compound organ. // Multi-tissue structure that is part of a compound organ. // Multi-tissue structure that is part of a compound organ." [CARO:0000019, CARO:MAH, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
xref: BILA:0000019
xref: CARO:0000019 ! compound organ component
xref: HAO:0000019 ! compound organ component
xref: TAO:0001489 ! compound organ component
xref: XAO:0003039 ! compound organ component
xref: ZFA:0001489 ! compound organ component
is_a: UBERON:0000481 ! multi-tissue structure

[Term]
id: UBERON:0000472
name: simple organ
alt_id: UBERON:CARO_0000021-XAO_0003038-ZFA_0001492
def: "Multi-tissue structure that is not part of a compound organ. // Multi-tissue structure that is not part of a compound organ. // Multi-tissue structure that is not part of a compound organ." [CARO:0000021, CARO:MAH, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
xref: BILA:0000021
xref: CARO:0000021 ! simple organ
xref: HAO:0000021 ! simple organ
xref: TAO:0001492 ! simple organ
xref: XAO:0003038 ! simple organ
xref: ZFA:0001492 ! simple organ
is_a: UBERON:0000481 ! multi-tissue structure

[Term]
id: UBERON:0000473
name: testis
alt_id: UBERON:CARO_0000027-FBbt_00004927-FBbt_00004928-FBbt_00007004-FMA_45664-FMA_7210-MA_0000396-MA_0000411-MIAA_0000029-MIAA_0000132-WBbt_0006794-XAO_0000155-XAO_0000157-XAO_0003006-ZFA_0000242-ZFA_0000598
def: "gonad of a male animal, produces sperm. // The organs of the male reproductive system. // Reproductive organ that produces and releases sperm. // MMale reproductive organ." [CARO:0000027, CARO:MAH, FB:FBrf0007735, FB:FBrf0034075, NLM:genitalia, WB:wjc, Wikipedia:Testis, XB:curator, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "male" RELATED []
xref: AAO:0000606 ! testis
xref: BILA:0000124
xref: BTO:0001363
xref: EHDAA:8146 ! testis
xref: FBbt:00004928 ! testis
xref: FMA:7210 ! Testis
xref: GAID:396 ! testis
xref: HAO:0001007 ! testis
xref: HOG:0000252 ! testis
xref: MA:0000411 ! testis
xref: MAT:0000132 ! testis
xref: MIAA:0000132 ! testis
xref: ncithesaurus:Testis
xref: TAO:0000598 ! testis
xref: WBbt:0006794 ! male gonad
xref: XAO:0000157 ! testis
xref: ZFA:0000598 ! testis
is_a: UBERON:0000991 ! gonad
intersection_of: UBERON:0000991 ! gonad
intersection_of: part_of UBERON:0000079 ! male reproductive system
relationship: part_of UBERON:0000079 ! male reproductive system

[Term]
id: UBERON:0000474
name: female reproductive system
alt_id: UBERON:CARO_0000028-FBbt_00004864-FBbt_00007011-FMA_45663-MA_0000381-MIAA_0000028-XAO_0000156-XAO_0003005-ZFA_0000303
def: "The organs of the female reproductive system." [FB:FBrf0007735, FB:FBrf0034074, NLM:genitalia, Wikipedia:Female_genitalia]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "female genital system" RELATED []
synonym: "female genitalia" RELATED []
xref: BTO:0000083
xref: FBbt:00004827 ! female genitalia
xref: FBbt:00004864 ! female reproductive system
xref: FMA:45663 ! Female genital system
xref: GAID:364 ! female genitalia
xref: HAO:0000324 ! female genitalia
xref: HOG:0000726 ! female reproductive system
xref: MA:0000381 ! female reproductive system
xref: MIAA:0000028 ! reproductive system - female
xref: ncithesaurus:Female_Reproductive_System
xref: OpenCyc:Mx4rvVipTZwpEbGdrcN5Y29ycA
xref: XAO:0000156 ! female genitalia
is_a: UBERON:0000990 ! reproductive system
intersection_of: UBERON:0000990 ! reproductive system
intersection_of: part_of UBERON:0003100 ! female organism
relationship: part_of UBERON:0003100 ! female organism

[Term]
id: UBERON:0000475
name: organism subdivision
alt_id: UBERON:CARO_0000032-FBbt_00007009-FMA_67504-MIAA_0000293-XAO_0003013-ZFA_0001308
alt_id: UBERON:MA_0002433-Principal
def: "Anatomical structure which is a primary subdivision of whole organism. The mereological sum of these is the whole organism. // Anatomical structure which is a primary subdivision of whole organism. The mereological sum of these is the whole organism. // Anatomical structure, which is a subdivision of a cardinal body part; it may exclude bones; is demarcated from other subdivisions of the same cardinal body part by anatomical surfaces or lines or topographical references; together with other contiguous subdivisions of the same cardinal body part, it constitutes a cardinal body part. Examples: thorax, perineum, back of neck, forearm, hand, phalanx, nose, auricle of ear, scrotum. // Anatomical structure that is a primary subdivision of the whole organism. // Anatomical structure which is a primary subdivision of whole organism. The mereological sum of these is the whole organism." [CARO:0000032, CARO:MAH, Wikipedia:Body_part, ZFIN:curator]
subset: uberon_slim
synonym: "anatomic region" EXACT []
synonym: "anatomical site" RELATED []
synonym: "body part" EXACT []
synonym: "Principal body part subdivision" EXACT []
synonym: "principal body part subdivision" EXACT []
synonym: "Subdivision of cardinal body part" EXACT []
synonym: "subdivision of cardinal body part" RELATED []
xref: BILA:0000032
xref: CARO:0000032 ! organism subdivision
xref: FBbt:00007009 ! organism subdivision
xref: FMA:67504 ! Subdivision of cardinal body part
xref: galen:BodyPart
xref: HAO:0000032 ! organism subdivision
xref: MA:0002433 ! anatomic region
xref: MAT:0000293 ! body part
xref: MIAA:0000293 ! body part
xref: NULL:Principal
xref: TAO:0001308 ! organism subdivision
xref: XAO:0003013 ! organism subdivision
xref: ZFA:0001308 ! organism subdivision
is_a: UBERON:0000061 ! anatomical structure
relationship: part_of UBERON:0000468
xref: ncithesaurus:Body_Part ! Body Part

[Term]
id: UBERON:0000476
name: acellular anatomical structure
alt_id: UBERON:CARO_0000040-FBbt_00007013-FMA_63863-ZFA_0000382
def: "Anatomical structure that consists of cell parts and cell substances and together does not constitute a cell or a tissue. // Anatomical structure which consists of cell parts and cell substances and together does not constitute a cell or a tissue. Examples: basement membrane, osteoid, prostatic concretion. // Anatomical structure that consists of cell parts and cell substances and together does not constitute a cell or a tissue." [CARO:MAH, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
synonym: "Acellular anatomical structure" EXACT []
xref: BILA:0000040
xref: CARO:0000040 ! acellular anatomical structure
xref: FBbt:00007013 ! acellular anatomical structure
xref: FMA:63863 ! Acellular anatomical structure
xref: HAO:0000040 ! acellular anatomical structure
xref: TAO:0000382 ! acellular anatomical structure
xref: XAO:0003162 ! acellular anatomical structure
xref: ZFA:0000382 ! acellular anatomical structure
is_a: UBERON:0000061 ! anatomical structure
disjoint_from: CL:0000000 ! cell
disjoint_from: UBERON:0000480 ! anatomical group

[Term]
id: UBERON:0000477
name: anatomical cluster
alt_id: UBERON:CARO_0000041-FMA_49443-ZFA_0001478
def: "Anatomical group that has its parts adjacent to one another. // Anatomical structure, which has as its parts a heterogeneous collection of organs, organ parts, cells or body part subdivisions that are adjacent to, or continuous with one another; does not constitute an organ, organ system or organ system subdivision, or body part or body part subdivision. Examples: joint, adnexa of uterus, root of lung, renal pedicle, back. // Anatomical group that has its parts adjacent to one another." [CARO:MAH, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
synonym: "Anatomical cluster" EXACT []
xref: BILA:0000041
xref: CARO:0000041 ! anatomical cluster
xref: FMA:49443 ! Anatomical cluster
xref: HAO:0000041 ! anatomical cluster
xref: TAO:0001478 ! anatomical cluster
xref: XAO:0003160 ! anatomical cluster
xref: ZFA:0001478 ! anatomical cluster
is_a: UBERON:0000480 ! anatomical group
disjoint_from: UBERON:0000467 ! anatomical system

[Term]
id: UBERON:0000478
name: extraembryonic structure
alt_id: UBERON:CARO_0000042-FBbt_00005835-FMA_85537-MIAA_0000061-ZFA_0000020
def: "Anatomical structure that is contiguous with the embryo and is comprised of portions of tissue or cells that will not contribute to the embryo." [CARO:MAH, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Extra-embryonic structure" EXACT []
synonym: "extra-embryonic structure" EXACT []
synonym: "extraembryonic component" RELATED []
synonym: "extraembryonic tissue" EXACT []
xref: BILA:0000042
xref: CARO:0000042 ! extraembryonic structure
xref: FBbt:00005835 ! extraembryonic structure
xref: FMA:85537 ! Extra-embryonic structure
xref: HAO:0000042 ! extraembryonic structure
xref: HOG:0000292 ! extraembryonic structure
xref: MAT:0000061 ! extraembryonic tissue
xref: MIAA:0000061 ! extraembryonic tissue
xref: TAO:0000020 ! extraembryonic structure
xref: ZFA:0000020 ! extraembryonic structure
is_a: UBERON:0000061 ! anatomical structure
disjoint_from: UBERON:0002050 ! embryonic structure
relationship: adjacent_to UBERON:0002050 ! embryonic structure
relationship: existence_starts_and_ends_during UBERON:0000068 ! embryo stage
xref: ncithesaurus:Extraembryonic_Structure ! Extraembryonic Structure
xref: BTO:0003360 ! extraembryonic tissue

[Term]
id: UBERON:0000479
name: portion of tissue
alt_id: UBERON:CARO_0000043-FBbt_00007003-XAO_0003040-ZFA_0001477
def: "Anatomical structure, that consists of similar cells and intercellular matrix, aggregated according to genetically determined spatial relationships. // Anatomical structure, that consists of similar cells and intercellular matrix, aggregated according to genetically determined spatial relationships. // Anatomical structure that consists of similar cells and intercellular matrix, aggregated according to genetically determined spatial relationships. // Anatomical structure, that consists of similar cells and intercellular matrix, aggregated according to genetically determined spatial relationships." [CARO:0000043, CARO:MAH, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
synonym: "tissue" RELATED []
synonym: "tissue portion" EXACT []
xref: BILA:0000043
xref: CARO:0000043 ! portion of tissue
xref: FBbt:00007003 ! portion of tissue
xref: FMA:9637 ! Portion of tissue
xref: HAO:0000043 ! portion of tissue
xref: TAO:0001477 ! portion of tissue
xref: XAO:0003040 ! portion of tissue
xref: ZFA:0001477 ! portion of tissue
is_a: UBERON:0000061 ! anatomical structure

[Term]
id: UBERON:0000480
name: anatomical group
alt_id: UBERON:CARO_0000054-XAO_0003001-ZFA_0001512
def: "Anatomical structure consisting of at least two non-overlapping organs, multi-tissue aggregates or portion of tissues or cells of different types that does not constitute an organism, organ, multi-tissue aggregate, or portion of tissue. // Anatomical structure consisting of at least two non-overlapping organs, multi-tissue aggregates or portion of tissues or cells of different types that does not constitute an organism, organ, multi-tissue aggregate, or portion of tissue. // Anatomical structure consisting of at least two non-overlapping organs, multi-tissue aggregates or portion of tissues or cells of different types that does not constitute an organism, organ, multi-tissue aggregate, or portion of tissue." [CARO:0000054, CARO:MAH, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
xref: BILA:0000054
xref: CARO:0000054 ! anatomical group
xref: HAO:0000054 ! anatomical group
xref: TAO:0001512 ! anatomical group
xref: XAO:0003001 ! anatomical group
xref: ZFA:0001512 ! anatomical group
is_a: UBERON:0000061 ! anatomical structure

[Term]
id: UBERON:0000481
name: multi-tissue structure
alt_id: UBERON:CARO_0000055-FBbt_00007010-XAO_0003037-ZFA_0001488
def: "Anatomical structure that has as its parts two or more portions of tissue of at least two different types and which through specific morphogenetic processes forms a single distinct structural unit demarcated by bona-fide boundaries from other distinct structural units of different types. // Anatomical structure that has as its parts two or more portions of tissue of at least two different types and which through specific morphogenetic processes forms a single distinct structural unit demarcated by bona-fide boundaries from other distinct structural units of different types. // Anatomical structure that has as its parts two or more portions of tissue of at least two different types and which through specific morphogenetic processes forms a single distinct structural unit demarcated by bona-fide boundaries from other distinct structural units of different types. // Anatomical structure that has as its parts two or more portions of tissue of at least two different types and which through specific morphogenetic processes forms a single distinct structural unit demarcated by bona-fide boundaries from other distinct structural units of different types." [CARO:0000055, CARO:MAH, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
xref: BILA:0000055
xref: CARO:0000055 ! multi-tissue structure
xref: FBbt:00007010 ! multi-tissue structure
xref: HAO:0000055 ! multi-tissue structure
xref: TAO:0001488 ! multi-tissue structure
xref: XAO:0003037 ! multi-tissue structure
xref: ZFA:0001488 ! multi-tissue structure
is_a: UBERON:0000061 ! anatomical structure
relationship: has_part UBERON:0000479 ! portion of tissue

[Term]
id: UBERON:0000482
name: basal lamina
alt_id: UBERON:CARO_0000065-FMA_62918-ZFA_0001485
def: "Acellular anatomical structure that consists of a thin sheet of fibrous proteins that underlie and support the cells of an epithelium. It separates the cells of an epithelium from any underlying tissue. // Acellular anatomical structure that consists of a thin sheet of fibrous proteins that underlie and support the cells of an epithelium. It separates the cells of an epithelium from any underlying tissue." [CARO:MAH, Wikipedia:Basal_lamina, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Basal lamina" EXACT []
synonym: "Basal lamina of connective tissue" EXACT []
synonym: "basal lamina of connective tissue" EXACT []
xref: BILA:0000065
xref: CARO:0000065 ! basal lamina
xref: FMA:62918 ! Basal lamina
xref: HAO:0000065 ! basal lamina
xref: TAO:0001485 ! basal lamina
xref: WBbt:0005756 ! basal lamina
xref: XAO:0003163 ! basal lamina
xref: ZFA:0001485 ! basal lamina
is_a: UBERON:0000476 ! acellular anatomical structure
relationship: adjacent_to UBERON:0000483 ! epithelium
xref: ncithesaurus:Basal_Lamina ! Basal Lamina

[Term]
id: UBERON:0000483
name: epithelium
alt_id: UBERON:CARO_0000066-FBbt_00007005-FMA_9639-XAO_0003045-ZFA_0001486
def: "Portion of tissue, that consists of one or more layers of epithelial cells connected to each other by cell junctions and which is underlain by a basal lamina. // Portion of tissue, that consists of one or more layers of cells with distinct apical-basal polarity, connected to each other by cell junctions. // Tissue, which consists of one or more layers of epithelial cells and a basement membrane; it covers the external surface of the body and lines the internal surfaces of the anatomical structures. Examples: simple squamous epithelium, glandular cuboidal epithelium, transitional epithelium, myoepithelium. // Portion of tissue that consists of one or more layers of epithelial cells connected to each other by cell junctions and that is underlain by a basal lamina. // Portion of tissue, that consists of one or more layers of epithelial cells connected to each other by cell junctions and which is underlain by a basal lamina." [CARO:MAH, Wikipedia:Epithelium, ZFA:0001486, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Epithelial tissue" EXACT []
synonym: "epithelial tissue" EXACT []
synonym: "Epithelium" EXACT []
xref: AAO:0000144 ! epithelium
xref: BILA:0000066
xref: BTO:0000416
xref: CARO:0000066 ! epithelium
xref: EHDAA:1545 ! epithelium
xref: EHDAA:2126 ! epithelium
xref: EHDAA:3792 ! epithelium
xref: EHDAA:3800 ! epithelium
xref: EHDAA:3806 ! epithelium
xref: EHDAA:4168 ! epithelium
xref: EHDAA:4174 ! epithelium
xref: EHDAA:4182 ! epithelium
xref: EHDAA:4188 ! epithelium
xref: EHDAA:4196 ! epithelium
xref: EHDAA:4696 ! epithelium
xref: EHDAA:4702 ! epithelium
xref: EHDAA:4710 ! epithelium
xref: EHDAA:4722 ! epithelium
xref: EHDAA:4724 ! epithelium
xref: EHDAA:4730 ! epithelium
xref: EHDAA:4743 ! epithelium
xref: EHDAA:5003 ! epithelium
xref: EHDAA:5007 ! epithelium
xref: EHDAA:510 ! epithelium
xref: EHDAA:5145 ! epithelium
xref: EHDAA:5155 ! epithelium
xref: EHDAA:5161 ! epithelium
xref: EHDAA:5167 ! epithelium
xref: EHDAA:5173 ! epithelium
xref: EHDAA:5198 ! epithelium
xref: EHDAA:5204 ! epithelium
xref: EHDAA:6100 ! epithelium
xref: EHDAA:6106 ! epithelium
xref: EHDAA:6116 ! epithelium
xref: EHDAA:6126 ! epithelium
xref: EHDAA:6136 ! epithelium
xref: EHDAA:6144 ! epithelium
xref: EHDAA:6150 ! epithelium
xref: EHDAA:6156 ! epithelium
xref: EHDAA:6162 ! epithelium
xref: EHDAA:6168 ! epithelium
xref: EHDAA:6180 ! epithelium
xref: EHDAA:6186 ! epithelium
xref: EHDAA:6192 ! epithelium
xref: EHDAA:6202 ! epithelium
xref: EHDAA:6214 ! epithelium
xref: EHDAA:6220 ! epithelium
xref: EHDAA:6230 ! epithelium
xref: EHDAA:6236 ! epithelium
xref: EHDAA:6246 ! epithelium
xref: EHDAA:6256 ! epithelium
xref: EHDAA:6266 ! epithelium
xref: EHDAA:6276 ! epithelium
xref: EHDAA:6286 ! epithelium
xref: EHDAA:6294 ! epithelium
xref: EHDAA:6300 ! epithelium
xref: EHDAA:6306 ! epithelium
xref: EHDAA:6312 ! epithelium
xref: EHDAA:6318 ! epithelium
xref: EHDAA:6526 ! epithelium
xref: EHDAA:6803 ! epithelium
xref: EHDAA:6966 ! epithelium
xref: EHDAA:7090 ! epithelium
xref: EHDAA:7765 ! epithelium
xref: EHDAA:7787 ! epithelium
xref: EHDAA:7794 ! epithelium
xref: EHDAA:7800 ! epithelium
xref: EHDAA:7806 ! epithelium
xref: EHDAA:7991 ! epithelium
xref: EHDAA:7999 ! epithelium
xref: EHDAA:8013 ! epithelium
xref: EHDAA:8019 ! epithelium
xref: EHDAA:8027 ! epithelium
xref: EHDAA:8037 ! epithelium
xref: EHDAA:8049 ! epithelium
xref: EHDAA:8055 ! epithelium
xref: EHDAA:8173 ! epithelium
xref: EHDAA:8185 ! epithelium
xref: EHDAA:8201 ! epithelium
xref: EHDAA:8211 ! epithelium
xref: EHDAA:8223 ! epithelium
xref: EHDAA:9035 ! epithelium
xref: EHDAA:9043 ! epithelium
xref: EHDAA:9049 ! epithelium
xref: EHDAA:9248 ! epithelium
xref: EHDAA:9257 ! epithelium
xref: EHDAA:9285 ! epithelium
xref: EHDAA:931 ! epithelium
xref: FBbt:00007005 ! epithelium
xref: FMA:9639 ! Portion of epithelium
xref: GAID:402 ! epithelium
xref: HAO:0000066 ! epithelium
xref: HOG:0000387 ! epithelium
xref: TAO:0001486 ! epithelium
xref: XAO:0003045 ! epithelium
xref: ZFA:0001486 ! epithelium
is_a: UBERON:0000119 ! cell layer
relationship: has_part CL:0000066 ! epithelial cell
xref: ncithesaurus:Epithelium ! Epithelium

[Term]
id: UBERON:0000484
name: simple cuboidal epithelium
alt_id: UBERON:CARO_0000067-FMA_45566-ZFA_0001497
def: "Unilaminar epithelium that consists of a single layer of cuboidal cells. // Unilaminar epithelium, which consists of a single layer of cuboidal cells. Examples: epithelium of proximal renal tubule, pigmented layer of retina, epithelium of lens. // Unilaminar epithelium that consists of a single layer of cuboidal cells." [CARO:MAH, Wikipedia:Simple_cuboidal_epithelium, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Epithelium simplex cuboideum" EXACT []
synonym: "epithelium simplex cuboideum" EXACT []
synonym: "Simple cuboidal epithelium" EXACT []
xref: BILA:0000067
xref: CARO:0000067 ! simple cuboidal epithelium
xref: FMA:45566 ! Simple cuboidal epithelium
xref: HAO:0000067 ! simple cuboidal epithelium
xref: TAO:0001497 ! simple cuboidal epithelium
xref: ZFA:0001497 ! simple cuboidal epithelium
is_a: UBERON:0000490 ! unilaminar epithelium
xref: ncithesaurus:Simple_Cuboidal_Epithelium ! Simple Cuboidal Epithelium

[Term]
id: UBERON:0000485
name: simple columnar epithelium
alt_id: UBERON:CARO_0000068-FMA_45567-ZFA_0001496
def: "Unilaminar epithelium that consists of a single layer of columnar cells. // Unilaminar epithelium, which consists of a single layer of columnar cells. Examples: ciliated columnar epithelium, gastric epithelium, microvillus columnar epithelium. // Unilaminar epithelium that consists of a single layer of columnar cells." [CARO:MAH, Wikipedia:Simple_columnar_epithelium, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Epithelium simplex columnare" EXACT []
synonym: "epithelium simplex columnare" EXACT []
synonym: "Simple columnar epithelium" EXACT []
synonym: "simple columnar epithelium" EXACT []
xref: CARO:0000068 ! simple columnar epithlium
xref: FMA:45567 ! Simple columnar epithelium
xref: HAO:0000068 ! simple columnar epithelium
xref: TAO:0001496 ! simple columnar epithelium
xref: ZFA:0001496 ! simple columnar epithelium
is_a: UBERON:0000490 ! unilaminar epithelium
xref: ncithesaurus:Simple_Columnar_Epithelium ! Simple Columnar Epithelium

[Term]
id: UBERON:0000486
name: multilaminar epithelium
alt_id: UBERON:CARO_0000069-FMA_45562-ZFA_0001494
def: "Epithelium that consists of more than one layer of epithelial cells. // Epithelium which consists of more than one layer of epithelial cells that may or may not be in contact with a basement membrane. Examples: keratinized stratified squamous epithelium, ciliated stratified columnar epithelium. // Epithelium that consists of more than one layer of epithelial cells." [CARO:MAH, Wikipedia:Stratified_epithelium, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Multilaminar epithelium" EXACT []
synonym: "Stratified epithelium" EXACT []
synonym: "stratified epithelium" EXACT []
xref: BILA:0000069
xref: CARO:0000069 ! multilaminar epithelium
xref: FMA:45562 ! Multilaminar epithelium
xref: HAO:0000069 ! multilaminar epithelium
xref: TAO:0001494 ! multilaminar epithelium
xref: ZFA:0001494 ! multilaminar epithelium
is_a: UBERON:0000483 ! epithelium
xref: ncithesaurus:Stratified_Epithelium ! Stratified Epithelium
xref: BTO:0002074 ! stratified epithelium

[Term]
id: UBERON:0000487
name: simple squamous epithelium
alt_id: UBERON:CARO_0000070-FMA_45565-ZFA_0001498
def: "Unilaminar epithelium that consists of a single layer of squamous cells. // Unilaminar epithelium which consists of a single layer of squamous cells. Examples: pulmonary alveolar epithelium, endothelium. // Unilaminar epithelium that consists of a single layer of squamous cells." [CARO:MAH, Wikipedia:Simple_squamous_epithelium, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Epithelium simplex squamosum" EXACT []
synonym: "epithelium simplex squamosum" EXACT []
synonym: "Simple squamous epithelium" EXACT []
xref: BILA:0000070
xref: CARO:0000070 ! simple squamous epithelium
xref: FMA:45565 ! Simple squamous epithelium
xref: HAO:0000070 ! simple squamous epithelium
xref: TAO:0001498 ! simple squamous epithelium
xref: ZFA:0001498 ! simple squamous epithelium
is_a: UBERON:0000490 ! unilaminar epithelium
xref: ncithesaurus:Simple_Squamous_Epithelium ! Simple Squamous Epithelium

[Term]
id: UBERON:0000488
name: atypical epithelium
alt_id: UBERON:CARO_0000071-FMA_61741-ZFA_0001493
def: "Epithelium that consists of epithelial cells not arranged in one ore more layers. // Epithelium the cells of which do not conform to the typical arrangement of unilaminar and multilaminar epithelium. Examples: olfactory epithelium; epithelium of ciliary body. // Epithelium that consists of epithelial cells not arranged in one or more layers." [CARO:MAH, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
synonym: "Atypical epithelium" EXACT []
synonym: "Heterogenous epithelium" EXACT []
synonym: "heterogenous epithelium" EXACT []
xref: BILA:0000071
xref: CARO:0000071 ! atypical epithelium
xref: FMA:61741 ! Atypical epithelium
xref: HAO:0000071 ! atypical epithelium
xref: TAO:0001493 ! atypical epithelium
xref: ZFA:0001493 ! atypical epithelium
is_a: UBERON:0000483 ! epithelium

[Term]
id: UBERON:0000489
name: cavitated compound organ
alt_id: UBERON:CARO_0000072-ZFA_0001490
def: "Compound organ that contains one or more macroscopic anatomical spaces. // Compound organ that contains one or more macroscopic anatomical spaces." [CARO:MAH, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
xref: BILA:0000072
xref: CARO:0000072 ! cavitated compound organ
xref: HAO:0000072 ! cavitated compound organ
xref: TAO:0001490 ! cavitated compound organ
xref: XAO:0003165 ! cavitated compound organ
xref: ZFA:0001490 ! cavitated compound organ
is_a: UBERON:0003103 ! compound organ

[Term]
id: UBERON:0000490
name: unilaminar epithelium
alt_id: UBERON:CARO_0000073-FMA_45561-ZFA_0001495
def: "Epithelium that consists of a single layer of epithelial cells. // Epithelium which consists of a single layer of epithelial cells. Examples: endothelium, mesothelium, glandular squamous epithelium. // Epithelium that consists of a single layer of epithelial cells." [CARO:MAH, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
synonym: "Simple epithelium" EXACT []
synonym: "simple epithelium" EXACT []
synonym: "Unilaminar epithelium" EXACT []
xref: BILA:0000073
xref: CARO:0000073 ! unilaminar epithelium
xref: FMA:45561 ! Unilaminar epithelium
xref: HAO:0000073 ! unilaminar epithelium
xref: TAO:0001495 ! unilaminar epithelium
xref: ZFA:0001495 ! unilaminar epithelium
is_a: UBERON:0000483 ! epithelium
xref: ncithesaurus:Simple_Epithelium ! Simple Epithelium

[Term]
id: UBERON:0000491
name: solid compound organ
alt_id: UBERON:CARO_0000074-ZFA_0001491
def: "Compound organ that does not contain macroscopic anatomical spaces. // Compound organ that does not contain macroscopic anatomical spaces." [CARO:MAH, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
xref: BILA:0000074
xref: CARO:0000074 ! solid compound organ
xref: HAO:0000074 ! solid compound organ
xref: TAO:0001491 ! solid compound organ
xref: XAO:0003164 ! solid compound organ
xref: ZFA:0001491 ! solid compound organ
is_a: UBERON:0003103 ! compound organ

[Term]
id: UBERON:0003891
name: stroma
def: "connective, non-functional supportive framework of a biological cell, tissue, or organ. Contrast with parenchyma." [Wikipedia:Stroma]
is_a: UBERON:0000064 ! organ part
xref: FMA:81494 ! Stroma

[Term]
id: UBERON:0000908
name: hippocampal commissure
alt_id: UBERON:Commissure-MA_0002723
def: "The lateral portions of the body of the fornix are joined by a thin triangular lamina, named the psalterium (lyra). This lamina contains some transverse fibers that connect the two hippocampi across the middle line and constitute the commissure of fornix (hippocampal commissure)." [Wikipedia:Hippocampal_commissure]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "commissure of fornix" RELATED [Wikipedia:Commissure_of_fornix]
xref: MA:0002723 ! hippocampal commissure
xref: NULL:Commissure
is_a: UBERON:0000061 ! anatomical structure
relationship: attached_to UBERON:0001954 ! hippocampus
relationship: part_of UBERON:0002316 ! white matter of neuraxis
xref: FMA:61970 ! Commissure of fornix of forebrain

[Term]
id: UBERON:0000909
name: cerebellum lobule vi
alt_id: UBERON:Declive-MA_0001003
comment: This class was created automatically from a combination of ontologies
synonym: "cerebellum lobule VI" EXACT []
synonym: "declive" RELATED []
xref: MA:0001003 ! cerebellum lobule VI
xref: NULL:Declive
is_a: UBERON:0000061 ! anatomical structure
relationship: part_of UBERON:0002037 ! cerebellum

[Term]
id: UBERON:0000910
name: chyme
alt_id: UBERON:ENVO_02000026-FMA_62961
def: "Chyme is a bodily fluid consisting of a liquid substance found in the stomach before passing through the pyloric valve and entering the duodenum. It results from the mechanical and chemical breakdown of a bolus and consists of partially digested food, water, hydrochloric acid, and various digestive enzymes." [Wikipedia:Chyme]
synonym: "chymus" EXACT [ENVO:02000026]
xref: ENVO:02000026
xref: FMA:62961 ! Chyme
is_a: UBERON:0000463 ! portion of organism substance

[Term]
id: UBERON:0000911
name: chyle
alt_id: UBERON:ENVO_02000030-FMA_61403
def: "Chyle is a bodily fluid consisting of a milky fluid consisting of lymph and emulsified fats; formed in the small intestine during digestion of ingested fats." [http://wordnet.princeton.edu/perl/webwn?s=chyle, Wikipedia:Chyle]
xref: ENVO:02000030
xref: FMA:61403 ! Chyle
is_a: UBERON:0002391 ! lymph

[Term]
id: UBERON:0000912
name: mucus
alt_id: UBERON:ENVO_02000040-FMA_66938
def: "Mucus is a bodily fluid consisting of a slippery secretion of the lining of the mucous membranes in the body. It is a viscous colloid containing antiseptic enzymes (such as lysozyme) and immunoglobulins. Mucus is produced by goblet cells in the mucous membranes that cover the surfaces of the membranes. It is made up of mucins and inorganic salts suspended in water." [Wikipedia:Mucus]
xref: ENVO:02000040
xref: FMA:66938 ! Mucus
xref: OpenCyc:Mx4rvVjHq5wpEbGdrcN5Y29ycA
is_a: UBERON:0000463 ! portion of organism substance
xref: ncithesaurus:Mucus ! Mucus

[Term]
id: UBERON:0000913
name: interstitial fluid
alt_id: UBERON:ENVO_02000042-FMA_9673
def: "Transudate which surrounds cells within a tissue. // Interstitial fluid is a bodily fluid consisting of a solution which bathes and surrounds the cells of multicellular animals. It is the main component of the extracellular fluid, which also includes plasma and transcellular fluid." [FMA:9673, Wikipedia:Interstitial_fluid]
synonym: "intercellular fluid" EXACT [ENVO:02000042]
synonym: "tissue fluid" EXACT [ENVO:02000042]
xref: ENVO:02000042
xref: FMA:9673 ! Tissue fluid
is_a: UBERON:0000463 ! portion of organism substance

[Term]
id: UBERON:0000914
name: segment
alt_id: UBERON:FBbt_00000003-FMA_11367-MIAA_0000271
def: "One of the repeated divisions of the whole organism." [FB:gg, Wikipedia:Segment]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
xref: FBbt:00000003 ! segment
xref: HAO:0000929 ! segment
xref: MAT:0000271 ! segment - adult
xref: MIAA:0000271 ! segment - adult
is_a: UBERON:0000475 ! organism subdivision
xref: ncithesaurus:Segmental ! Segmental

[Term]
id: UBERON:0000915
name: thorax
alt_id: UBERON:FBbt_00000015-FMA_9576-MA_0000022-MIAA_0000295
def: "Organismal subdivision of body that lies between the head and the abdomen [Wikipedia]." [ISBN:3110148986, Wikipedia:Thorax]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Thorax" EXACT []
synonym: "upper body" RELATED []
xref: BTO:0001368
xref: FBbt:00000015 ! thorax
xref: FMA:9576 ! Thorax
xref: GAID:91 ! thorax
xref: HAO:0001015 ! thorax
xref: MA:0000022 ! thoracic segment of trunk
xref: MAT:0000295 ! thorax
xref: MIAA:0000295 ! thorax
is_a: UBERON:0000475 ! organism subdivision
xref: ncithesaurus:Thorax ! Thorax

[Term]
id: UBERON:0000916
name: abdomen
alt_id: UBERON:FBbt_00000020-FMA_9577-MA_0000029-MIAA_0000298
def: "In vertebrates such as mammals the abdomen (belly) constitutes the part of the body between the thorax (chest) and pelvis. The region enclosed by the abdomen is termed the abdominal cavity. In arthropods it is the most distal section of the body which lies behind the thorax or cephalothorax. //Dmel: The third large region of the insect body, which originally comprised twelve segments, each segment is usually formed by a dorsal tergite and a ventral sternite and carries on both sides a spiracle, sometimes, both the dorsal and the ventral plates are further subdivided to give rise to laterotergites and laterosternites. In the context of Drosophila refers to the most posterior of the three main tagmata or divisions of the body plan, after the head and the thorax. // Subdivision of trunk, which is demarcated from the thorax internally by the inferior surface of the sternocostal part of the diaphragm and externally by the costal margin, from the pelvis by the plane of the superior pelvic aperture and from the lower limbs by the inguinal folds; together with the thorax, pelvis, and perineum, it constitutes the trunk. Examples: There is only one abdomen." [FB:gg, ISBN:3110148986, Wikipedia:Abdomen]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Abdomen" EXACT []
synonym: "adult abdomen" RELATED []
synonym: "belly" RELATED []
xref: BTO:0000020
xref: FBbt:00000020 ! abdomen
xref: FMA:9577 ! Abdomen
xref: GAID:16 ! abdomen
xref: galen:Abdomen
xref: HAO:0000015 ! abdomen
xref: MA:0000029 ! abdomen
xref: MAT:0000298 ! abdomen
xref: MIAA:0000298 ! abdomen
xref: OpenCyc:Mx4rvVjgyZwpEbGdrcN5Y29ycA
is_a: UBERON:0000475 ! organism subdivision

[Term]
id: UBERON:0000917
name: abdominal segment
alt_id: UBERON:FBbt_00000021-SPD_0000055
xref: FBbt:00000021 ! abdominal segment
xref: HAO:0000016 ! abdominal segment
xref: SPD:0000055 ! abdominal segment
is_a: UBERON:0000914 ! segment
intersection_of: UBERON:0000914 ! segment
intersection_of: part_of UBERON:0000916 ! abdomen
relationship: part_of UBERON:0000916 ! abdomen

[Term]
id: UBERON:0000918
name: yolk
alt_id: UBERON:FBbt_00000035-MIAA_0000335-XAO_0000281
def: "The nutritive substance contained in the egg." [FB:gg, Wikipedia:Yolk]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "vegetal yolk mass" BROAD []
synonym: "yolk cell" RELATED []
xref: FBbt:00000035 ! yolk
xref: MAT:0000335 ! yolk
xref: MIAA:0000335 ! yolk
xref: TAO:0000084 ! yolk
xref: XAO:0000281 ! vegetal yolk mass
xref: ZFA:0000084 ! yolk
is_a: UBERON:0002050 ! embryonic structure

[Term]
id: UBERON:0000919
name: lipid droplet
alt_id: UBERON:FBbt_00000037-FMA_62962
def: "Cell substance contained in lipid vacoule." []
comment: In GO this is a cellular component; in FMA it is a acellular anatomical structure. These two parent classes are disjoint in CARO
subset: uberon_slim
synonym: "Lipid droplet" EXACT []
xref: FBbt:00000037 ! lipid droplet
xref: FMA:62962 ! Lipid droplet
is_a: UBERON:0000476 ! acellular anatomical structure
relationship: part_of UBERON:0000918 ! yolk

[Term]
id: UBERON:0000920
name: chorion (egg)
alt_id: UBERON:FBbt_00000038-FMA_80224-ZFA_0000329
alt_id: UBERON:FMA_18674-MA_0001715
def: "A hard shell external to the vitelline membrane of the egg[FBbt]. The egg shell[ZFA]. A protective, noncellular membrane that surrounds the eggs of various animals including insects and fish [GO]." [FB:gg, GO:0042600, Wikipedia:Chorion_(egg)]
subset: uberon_slim
synonym: "chorion" RELATED []
xref: FBbt:00000038 ! chorion
xref: GO:0042600
xref: TAO:0000329 ! chorion
xref: ZFA:0000329 ! chorion
is_a: UBERON:0000476 ! acellular anatomical structure
relationship: surrounds UBERON:0003125 ! vitelline membrane

[Term]
id: UBERON:0000921
name: pronucleus
alt_id: UBERON:FBbt_00000048-FMA_84673
def: "." [Wikipedia:Pronucleus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Pronucleus" EXACT []
xref: FBbt:00000048 ! pronucleus
xref: FMA:84673 ! Pronucleus
is_a: UBERON:0002050 ! embryonic structure

[Term]
id: UBERON:0000923
name: germ layer
alt_id: UBERON:FBbt_00000110-FMA_69069
alt_id: UBERON:XAO_0003011-ZFA_0001122
def: "A layer of cells produced during the process of gastrulation during the early development of the animal embryo, which is distinct from other such layers of cells, as an early step of cell differentiation. The three types of germ layers are the endoderm, ectoderm, and mesoderm." [Wikipedia:Germ_layer]
subset: uberon_slim
synonym: "embryonic germ layer" RELATED []
synonym: "embryonic germ layers" RELATED []
synonym: "Embryonic tissue" EXACT []
synonym: "embryonic tissue" EXACT []
synonym: "Germ layer" EXACT []
synonym: "germ layer" RELATED []
synonym: "primary germ layer" EXACT []
xref: AAO:0000480 ! primary_germ_layer
xref: BILA:0000035
xref: BTO:0000556
xref: FBbt:00000110 ! germ layer
xref: FMA:69069 ! Embryonic tissue
xref: GAID:1303 ! germ layer
xref: HOG:0001223 ! primary germ layer
xref: TAO:0001122 ! primary germ layer
xref: XAO:0003011 ! primary germ layer
xref: ZFA:0001122 ! primary germ layer
is_a: UBERON:0000479 ! portion of tissue
is_a: UBERON:0001048 ! primordium
relationship: develops_from UBERON:0002532 ! epiblast
xref: ncithesaurus:Embryonic_Tissue ! Embryonic Tissue

[Term]
id: UBERON:0000924
name: ectoderm
alt_id: UBERON:FBbt_00000111-FMA_69070-MIAA_0000173-XAO_0000001-ZFA_0000016
def: "The outermost germ layer of the embryo. // Primary germ layer that is the outer of the embryo's three germ layers and gives rise to epidermis and neural tissue." [FB:gg, OMD:ectoderm, Wikipedia:Ectoderm]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Ectoderm" EXACT []
xref: AAO:0000137 ! ectoderm
xref: BILA:0000036
xref: BTO:0000315
xref: EFO:0000414 ! ectoderm
xref: EHDAA:1084 ! ectoderm
xref: EHDAA:1090 ! ectoderm
xref: EHDAA:132 ! ectoderm
xref: EHDAA:138 ! ectoderm
xref: EHDAA:1636 ! ectoderm
xref: EHDAA:1652 ! ectoderm
xref: EHDAA:1667 ! ectoderm
xref: EHDAA:1673 ! ectoderm
xref: EHDAA:1701 ! ectoderm
xref: EHDAA:2360 ! ectoderm
xref: EHDAA:538 ! ectoderm
xref: EHDAA:577 ! ectoderm
xref: EHDAA:585 ! ectoderm
xref: EHDAA:597 ! ectoderm
xref: EHDAA:609 ! ectoderm
xref: EHDAA:615 ! ectoderm
xref: EHDAA:621 ! ectoderm
xref: FBbt:00000111 ! ectoderm
xref: FMA:69070 ! Ectoderm
xref: GAID:1304 ! ectoderm
xref: MAT:0000155 ! ectoderm
xref: MAT:0000173 ! ectoderm
xref: MIAA:0000173 ! ectoderm
xref: TAO:0000016 ! ectoderm
xref: XAO:0000001 ! ectoderm
xref: ZFA:0000016 ! ectoderm
is_a: UBERON:0000923 ! germ layer
xref: ncithesaurus:Ectoderm ! Ectoderm

[Term]
id: UBERON:0000925
name: endoderm
alt_id: UBERON:FBbt_00000125-FMA_69071-MIAA_0000175-XAO_0000090-ZFA_0000017
def: "The innermost germ layer of the embryo. // Primary germ layer that lies remote from the surface of the embryo and gives rise to internal tissues such as gut." [FB:gg, OMD:endoderm, Wikipedia:Endoderm]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Endoderm" EXACT []
synonym: "entoderm" RELATED []
xref: AAO:0000139 ! endoderm
xref: BILA:0000038
xref: BTO:0000800
xref: EHDAA:103 ! endoderm
xref: EHDAA:1088 ! endoderm
xref: EHDAA:1092 ! endoderm
xref: EHDAA:1638 ! endoderm
xref: EHDAA:1654 ! endoderm
xref: EHDAA:166 ! endoderm
xref: EHDAA:1671 ! endoderm
xref: EHDAA:1675 ! endoderm
xref: EHDAA:524 ! endoderm
xref: EHDAA:530 ! endoderm
xref: EHDAA:540 ! endoderm
xref: EHDAA:581 ! endoderm
xref: EHDAA:587 ! endoderm
xref: EHDAA:599 ! endoderm
xref: EHDAA:619 ! endoderm
xref: EHDAA:623 ! endoderm
xref: FBbt:00000125 ! endoderm
xref: FMA:69071 ! Endoderm
xref: GAID:1305 ! endoderm
xref: MAT:0000175 ! endoderm
xref: MIAA:0000175 ! endoderm
xref: TAO:0000017 ! endoderm
xref: XAO:0000090 ! endoderm
xref: ZFA:0000017 ! endoderm
is_a: UBERON:0000923 ! germ layer
xref: ncithesaurus:Endoderm ! Endoderm

[Term]
id: UBERON:0000926
name: mesoderm
alt_id: UBERON:FBbt_00000126-FMA_69072-MIAA_0000174-XAO_0000050-ZFA_0000041
def: "The middle germ layer of the embryo, between the endoderm and ectoderm. // Primary germ layer that is the middle of the embryo's three germ layers." [FB:gg, OMD:mesoderm, Wikipedia:Mesoderm]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Mesoderm" EXACT []
synonym: "mesodermal mantle" RELATED []
xref: AAO:0000304 ! mesoderm
xref: BILA:0000037
xref: BTO:0000839
xref: EHDAA:124 ! mesoderm
xref: EHDAA:140 ! mesoderm
xref: EHDAA:154 ! mesoderm
xref: EHDAA:160 ! mesoderm
xref: EHDAA:168 ! mesoderm
xref: EHDAA:183 ! mesoderm
xref: FBbt:00000126 ! mesoderm
xref: FMA:69072 ! Mesoderm
xref: GAID:522 ! mesoderm
xref: MAT:0000174 ! mesoderm
xref: MIAA:0000174 ! mesoderm
xref: TAO:0000041 ! mesoderm
xref: XAO:0000050 ! mesoderm
xref: ZFA:0000041 ! mesoderm
is_a: UBERON:0000923 ! germ layer
xref: ncithesaurus:Mesoderm ! Mesoderm

[Term]
id: UBERON:0000927
name: mesectoderm
alt_id: UBERON:FBbt_00000136-MIAA_0000243
def: "A double row of cells which are located at the midline from the end of gastrulations. The morphology of these cells is distinct from adjacent ectodermal cells - they are elongated such that one end remains exposed to the outside of the embryo at the mideline while the other end bissects the internalised mesoderm." [FB:FBrf0089570]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "MesEc" RELATED []
xref: FBbt:00000136 ! mesectoderm
xref: MAT:0000243 ! mesectoderm
xref: MIAA:0000243 ! mesectoderm
is_a: UBERON:0000923 ! germ layer
relationship: adjacent_to UBERON:0000924 ! ectoderm

[Term]
id: UBERON:0000928
name: embryonic segment
alt_id: UBERON:FBbt_00000154-MIAA_0000244
comment: This class was created automatically from a combination of ontologies
synonym: "segment - embryonic" EXACT []
xref: FBbt:00000154 ! embryonic segment
xref: MAT:0000244 ! segment - embryonic
xref: MIAA:0000244 ! segment - embryonic
is_a: UBERON:0000914 ! segment
intersection_of: UBERON:0000914 ! segment
intersection_of: part_of UBERON:0000922 ! embryo

[Term]
id: UBERON:0000929
name: pharyngeal branch
alt_id: UBERON:FBbt_00000394-FMA_6234
def: "Motor nerve of the pharynx, arises from the upper part of the ganglion nodosum, and consists principally of filaments from the cranial portion of the accessory nerve." [Wikipedia:Pharyngeal_branch_of_vagus_nerve]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Pharyngeal branch" EXACT []
synonym: "Pharyngeal branch of inferior vagal ganglion" EXACT []
synonym: "pharyngeal branch of inferior vagal ganglion" EXACT []
synonym: "Pharyngeal branch of vagus" EXACT []
synonym: "pharyngeal branch of vagus" EXACT []
synonym: "Pharyngeal branch of vagus nerve" EXACT []
synonym: "pharyngeal branch of vagus nerve" EXACT []
synonym: "Ramus pharyngealis nervi vagalis" EXACT []
synonym: "ramus pharyngealis nervi vagalis" EXACT []
synonym: "Tenth cranial nerve pharyngeal branch" EXACT []
synonym: "tenth cranial nerve pharyngeal branch" EXACT []
synonym: "Vagal pharyngeal branch" EXACT []
synonym: "vagal pharyngeal branch" EXACT []
synonym: "Vagus nerve pharyngeal branch" EXACT []
synonym: "vagus nerve pharyngeal branch" EXACT []
xref: FMA:6234 ! Pharyngeal branch of vagus nerve
is_a: UBERON:0001021 ! nerve
relationship: part_of UBERON:0001005 ! trachea
relationship: part_of UBERON:0001759 ! vagus nerve

[Term]
id: UBERON:0000930
name: stomodeum
alt_id: UBERON:FBbt_00000439-ZFA_0001290
def: "Wikipedia: Depression between the brain and the pericardium in an embryo, and is the precursor of the mouth and the anterior lobe of the pituitary gland." [Wikipedia:Stomodeum]
subset: uberon_slim
synonym: "stomatodeum" EXACT [Wikipedia:Stomodeum]
xref: FBbt:00000439 ! stomodeum
xref: ZFA:0001290 ! stomodeum
relationship: part_of UBERON:0001555 ! gut
xref: ncithesaurus:Stomodeum ! Stomodeum

[Term]
id: UBERON:0000931
name: proctodeum
alt_id: UBERON:FBbt_00000440-WBbt_0006795
def: "The posterior part of the alimentary canal that is derived from the amnioproctodeal invagination of the ectoderm. // junction between the alimentary and genital tracts in the male." [FB:gg, WB:Paper00000462, Wikipedia:Proctodeum]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
xref: FBbt:00000440 ! proctodeum
xref: HOG:0000139 ! proctodeum
xref: WBbt:0006795 ! proctodeum
xref: XAO:0001019 ! proctodeum
is_a: UBERON:0000061 ! anatomical structure
relationship: develops_from UBERON:0000924 ! ectoderm
relationship: part_of UBERON:0001046 ! hindgut
xref: ncithesaurus:Proctodeum ! Proctodeum

[Term]
id: UBERON:0000932
name: ventral longitudinal muscle
alt_id: UBERON:FBbt_00000482-WBbt_0005814
comment: This class was created automatically from a combination of ontologies
xref: FBbt:00000482 ! ventral longitudinal muscle
xref: WBbt:0005814 ! ventral longitudinal muscle
is_a: UBERON:0001630 ! muscle organ
relationship: part_of UBERON:0000990 ! reproductive system

[Term]
id: UBERON:0000933
name: pharyngeal muscle
alt_id: UBERON:FBbt_00000487-FMA_46619-MA_0001797
def: "A muscle that forms part of the pharynx." [GO:0043282]
comment: TODO: this is probably an inappropriate grouping term. In drosophila this is a cell. In mammals an organ.
synonym: "Muscle of pharynx" EXACT []
synonym: "muscle of pharynx" EXACT []
synonym: "Pharyngeal muscle" EXACT []
synonym: "pharynx muscle" EXACT []
xref: BTO:0001048
xref: FBbt:00000487 ! pharyngeal muscle
xref: FMA:46619 ! Muscle of pharynx
xref: GAID:154 ! pharyngeal muscle
xref: MA:0001797 ! pharynx muscle
is_a: UBERON:0002377 ! muscle of neck
intersection_of: UBERON:0001630 ! muscle organ
intersection_of: part_of UBERON:0001042 ! pharynx
relationship: part_of UBERON:0001042 ! pharynx
xref: ncithesaurus:Pharyngeal_Muscle ! Pharyngeal Muscle

[Term]
id: UBERON:0000934
name: ventral nerve cord
alt_id: UBERON:FBbt_00001102-MIAA_0000339-WBbt_0005829
def: "a large process bundle that runs along the vental mid-line extending from the ventral region of the nerve ring." [WB:Paper00000938, Wikipedia:Ventral_nerve_cord]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "ventral cord" RELATED []
xref: EFO:0000896 ! ventral nerve cord
xref: FBbt:00001102 ! ventral nerve cord
xref: MAT:0000339 ! ventral nerve cord
xref: MIAA:0000339 ! ventral nerve cord
xref: WBbt:0005829 ! ventral nerve cord
is_a: UBERON:0000045 ! ganglion
xref: BTO:0002328 ! ventral nerve cord

[Term]
id: UBERON:0000935
name: anterior commissure
alt_id: UBERON:FBbt_00001105-FMA_61961-MA_0002722-ZFA_0001108
def: "bundle of nerve fibers (white matter), connecting the two cerebral hemispheres across the midline, and placed in front of the columns of the fornix. The great majority of fibers connecting the two hemispheres travel through the corpus callosum, which is over 10 times larger than the anterior commissure, and other routes of communication pass through the hippocampal commissure or, indirectly, via subcortical connections. Nevertheless, the anterior commissure is a significant pathway that can be clearly distinguished in the brains of all mammals." [Wikipedia:Anterior_commissure]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Anterior commissure" EXACT []
synonym: "commissura anterior" RELATED []
synonym: "commissura rostral" RELATED []
synonym: "Commissura rostralis" EXACT []
synonym: "commissura rostralis" EXACT []
synonym: "precommisure" RELATED [Wikipedia:Anterior_commisure]
synonym: "rostral commissure" RELATED []
xref: FMA:61961 ! Anterior commissure
xref: MA:0002722 ! anterior commissure
xref: TAO:0001108 ! anterior commissure
xref: ZFA:0001108 ! anterior commissure
is_a: UBERON:0002473 ! intercerebral commissure
xref: ncithesaurus:Anterior_Commissure ! Anterior Commissure
xref: BTO:0002169 ! anterior commissure

[Term]
id: UBERON:0000936
name: posterior commissure
alt_id: UBERON:FBbt_00001120-FMA_62072-MA_0002743-ZFA_0000320
def: "Rounded band of white fibers crossing the middle line on the dorsal aspect of the upper end of the cerebral aqueduct. It is important in the bilateral pupillary light reflex." [Wikipedia:Posterior_commissure]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Caudal commissure" EXACT []
synonym: "caudal commissure" EXACT []
synonym: "Epithalamic commissure" EXACT []
synonym: "epithalamic commissure" EXACT []
synonym: "Posterior commissure" EXACT []
xref: FMA:62072 ! Posterior commissure
xref: MA:0002743 ! posterior commissure
xref: NIF_GrossAnatomy:birnlex_1026 ! Posterior commissure
xref: TAO:0000320 ! caudal commissure
xref: ZFA:0000320 ! caudal commissure
is_a: UBERON:0001020 ! commissure
relationship: part_of UBERON:0000934 ! ventral nerve cord
relationship: part_of UBERON:0002298 ! brainstem
xref: ncithesaurus:Posterior_Commissure ! Posterior Commissure

[Term]
id: UBERON:0000937
name: proneural cluster
alt_id: UBERON:FBbt_00001135-ZFA_0000068
synonym: "proneural clusters" RELATED [ZFA:0000068]
xref: FBbt:00001135 ! proneural cluster
xref: ZFA:0000068 ! proneural cluster
relationship: part_of UBERON:0003075 ! neural plate

[Term]
id: UBERON:0000939
name: imaginal disc
alt_id: UBERON:FBbt_00001761-MIAA_0000064
def: "A tissue in the larva which gives rise to the adult external cuticle." [FB:gg, Wikipedia:Imaginal_disc]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "imaginal disk" RELATED []
xref: FBbt:00001761 ! imaginal disc
xref: MAT:0000064 ! imaginal disc
xref: MIAA:0000064 ! imaginal disc
is_a: UBERON:0000481 ! multi-tissue structure

[Term]
id: UBERON:0000941
name: optic nerve
alt_id: UBERON:FBbt_00001956-FMA_50863-MA_0001097-XAO_0000188-ZFA_0000435
def: "Nerve trunk which is continuous with the retina and the optic chiasm. // Cranial nerve that runs to the eye. // Cranial nerve which is comprised of retinal ganglion cell axons running posterior medially towards the optic chiasm, at which some of the axons cross the midline and after which the structure is termed the optic tract. // transmits visual information from the retina to the brain." [ISBN:0471209627, Wikipedia:Optic_nerve, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "CN-II" RELATED []
synonym: "cranial nerve II" RELATED []
synonym: "optic" RELATED []
synonym: "optic II nerve" EXACT []
synonym: "optic ii nerve" EXACT []
synonym: "Optic nerve" EXACT []
synonym: "Optic nerve [II]" EXACT []
synonym: "optic nerve [ii]" EXACT []
synonym: "Second cranial nerve" EXACT []
synonym: "second cranial nerve" EXACT []
xref: BTO:0000966
xref: EHDAA:6788 ! optic nerve
xref: FBbt:00001956 ! optic nerve
xref: FMA:50863 ! Optic nerve
xref: GAID:831 ! optic nerve
xref: HOG:0000543 ! optic nerve
xref: MA:0001097 ! optic II nerve
xref: NIF_GrossAnatomy:birnlex_1640 ! Optic nerve
xref: OpenCyc:Mx4rvVjLm5wpEbGdrcN5Y29ycA
xref: TAO:0000435 ! cranial nerve II
xref: XAO:0000188 ! cranial nerve II
xref: ZFA:0000435 ! cranial nerve II
is_a: UBERON:0001785 ! cranial nerve
intersection_of: UBERON:0001021 ! nerve
intersection_of: part_of UBERON:0000970 ! eye
relationship: continuous_with UBERON:0000966 ! retina
relationship: part_of UBERON:0000970 ! eye
xref: ncithesaurus:Optic_Nerve ! Optic Nerve

[Term]
id: UBERON:0000942
name: frontal nerve
alt_id: UBERON:FBbt_00002630-FMA_52638
def: "." [Wikipedia:Frontal_nerve]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Frontal nerve" EXACT []
xref: FBbt:00002630 ! frontal nerve
xref: FMA:52638 ! Frontal nerve
is_a: UBERON:0001021 ! nerve
xref: ncithesaurus:Frontal_Nerve ! Frontal Nerve

[Term]
id: UBERON:0000943
name: labial sensillum
alt_id: UBERON:FBbt_00002721-WBbt_0005107
def: "sensillum of inner or outer labial." [WB:rynl]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
xref: FBbt:00002721 ! labial sensillum
xref: WBbt:0005107 ! labial sensillum
is_a: UBERON:0002536 ! arthropod sensillum

[Term]
id: UBERON:0000944
name: dorsal branch
alt_id: UBERON:FBbt_00003051-FMA_76733
comment: This class was created automatically from a combination of ontologies
synonym: "Dorsal branch" EXACT []
synonym: "Dorsal vein" EXACT []
synonym: "dorsal vein" EXACT []
xref: FBbt:00003051 ! dorsal branch
xref: FMA:76733 ! Dorsal vein
is_a: UBERON:0001005 ! trachea

[Term]
id: UBERON:0000945
name: stomach
alt_id: UBERON:FBbt_00003138-FMA_7148-MA_0000353-MIAA_0000051-XAO_0000128
def: "The middle region of the alimentary canal, the epithelium of which is lined with peritrophic membrane (not chitinous intima as for the foregut and hindgut. // Organ with organ cavity which is continuous proximally with the esophagus and distally with the small intestine. Examples: There is only one stomach. // Internal organ that is the dilated portion of the alimentary tract situated between the esophagus and the beginning of the duodenum. It produces gastric juices involved in the breakdown of food." [FB:FBrf0007735, OMD:stomach, Wikipedia:Stomach]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "anterior intestine" RELATED []
synonym: "mesenteron" RELATED []
synonym: "Stomach" EXACT []
synonym: "stomach" RELATED []
synonym: "ventriculus" EXACT []
xref: AAO:0000579 ! stomach
xref: BTO:0001307
xref: EFO:0000837 ! stomach
xref: EHDAA:2993 ! stomach
xref: FMA:7148 ! Stomach
xref: GAID:293 ! stomach
xref: HOG:0000408 ! stomach
xref: MA:0000353 ! stomach
xref: MAT:0000051 ! stomach
xref: MIAA:0000051 ! stomach
xref: ncithesaurus:Stomach
xref: OpenCyc:Mx4rvVjlqpwpEbGdrcN5Y29ycA
xref: XAO:0000128 ! stomach
is_a: UBERON:0000062 ! organ
relationship: part_of UBERON:0001041 ! foregut

[Term]
id: UBERON:0000946
name: cardial valve
alt_id: UBERON:FBbt_00003140-FMA_7110-MA_0000086-ZFA_0005065
def: "A deep fold in the foregut epithelium enclosed by the ventricular wall which makes up the outer layer of the cardia. The space between the two layers of this fold is filled with longitudinal muscle fibers. The stomodeal intima continues over both layers. The cells of the epithelium are cuboidal to columnar and are vacuolate. // Anatomical valve which has as its parts the endocardium and fibroelastic connective tissue attached to the fibrous ring of heart." [FB:FBrf007735, Wikipedia:Cardiac_valve]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Cardiac valve" EXACT []
synonym: "cardiac valve" RELATED []
synonym: "Heart valve" EXACT []
synonym: "heart valve" EXACT []
synonym: "heart valves" RELATED []
synonym: "stomodaeal valve" RELATED []
synonym: "Valve of heart" EXACT []
synonym: "valve of heart" EXACT []
xref: BTO:0000564
xref: FBbt:00003140 ! cardial valve
xref: FMA:7110 ! Cardiac valve
xref: GAID:176 ! heart valve
xref: galen:HeartValve
xref: HOG:0000818 ! heart valve
xref: MA:0000086 ! heart valve
xref: OpenCyc:Mx4rv8oyuJwpEbGdrcN5Y29ycA
xref: TAO:0005065 ! heart valve
xref: ZFA:0005065 ! heart valve
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0000948 ! heart
xref: ncithesaurus:Cardiac_Valve ! Cardiac Valve

[Term]
id: UBERON:0000947
name: aorta
alt_id: UBERON:FBbt_00003153-FMA_3734-MA_0000062-MA_0000476-MIAA_0000035-XAO_0003010-ZFA_0000014
def: "Artery carrying blood from the heart to all the organs and other structures of the body, bringing oxygenated blood to all parts of the body in the systemic circulation" [Wikipedia:Aorta]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "adult aorta" EXACT []
synonym: "Aorta" EXACT []
synonym: "DA" RELATED []
synonym: "dorsal aorta" EXACT []
synonym: "Trunk of aortic tree" EXACT []
synonym: "trunk of aortic tree" EXACT []
synonym: "Trunk of systemic arterial tree" EXACT []
synonym: "trunk of systemic arterial tree" EXACT []
xref: BTO:0000135
xref: EFO:0000265 ! aorta
xref: EHDAA:402 ! dorsal aorta
xref: FBbt:00003153 ! adult aorta
xref: FMA:3734 ! Aorta
xref: GAID:469 ! aorta
xref: galen:Aorta
xref: HOG:0000264 ! dorsal aorta
xref: MA:0000062 ! aorta
xref: MA:0000476 ! dorsal aorta
xref: MAT:0000035 ! aorta
xref: MIAA:0000035 ! aorta
xref: OpenCyc:Mx4rvVjvTpwpEbGdrcN5Y29ycA
xref: TAO:0000014 ! dorsal aorta
xref: XAO:0003010 ! aorta
xref: ZFA:0000014 ! dorsal aorta
is_a: UBERON:0001637 ! artery
xref: ncithesaurus:Aorta ! Aorta

[Term]
id: UBERON:0000948
name: heart
alt_id: UBERON:FBbt_00003154-FMA_7088-MA_0000072-MIAA_0000036-XAO_0000064-ZFA_0000114
def: "A hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood[GO]." [GO:0007507]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Heart" EXACT []
synonym: "heart" EXACT []
xref: BILA:0000020
xref: BTO:0000562
xref: EFO:0000815 ! heart
xref: EHDAA:420 ! heart
xref: FBbt:00003154 ! adult heart
xref: FMA:7088 ! Heart
xref: GAID:174 ! heart
xref: galen:Heart
xref: HOG:0000276 ! heart
xref: MA:0000072 ! heart
xref: MAT:0000036 ! heart
xref: MIAA:0000036 ! heart
xref: OpenCyc:Mx4rvVjvDpwpEbGdrcN5Y29ycA
xref: TAO:0000114 ! heart
xref: XAO:0000064 ! heart
xref: ZFA:0000114 ! heart
is_a: UBERON:0000481 ! multi-tissue structure
is_a: UBERON:0002075 ! viscus
relationship: part_of UBERON:0001009 ! circulatory system
relationship: part_of UBERON:0002323 ! body cavity
xref: ncithesaurus:Heart ! Heart

[Term]
id: UBERON:0000949
name: endocrine system
alt_id: UBERON:FBbt_00003214-FBbt_00005068-FMA_9668-MA_0000012-XAO_0000158-ZFA_0001158
def: "Anatomical system that consists of the glands and parts of glands that produce endocrine secretions and help to integrate and control bodily metabolic activity." [NLM:endocrine+system, Wikipedia:Endocrine_system]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Endocrine system" EXACT []
synonym: "endocrine system" EXACT []
synonym: "exocrine system" BROAD []
synonym: "Systema endocrinum" EXACT []
synonym: "systema endocrinum" EXACT []
xref: FBbt:00003214 ! adult endocrine system
xref: FBbt:00005068 ! endocrine system
xref: FMA:9668 ! Endocrine system
xref: GAID:439 ! endocrine system
xref: HOG:0000098 ! endocrine system
xref: MA:0000012 ! endocrine system
xref: TAO:0001158 ! endocrine system
xref: XAO:0000158 ! endocrine system
xref: ZFA:0001158 ! endocrine system
is_a: UBERON:0000467 ! anatomical system
disjoint_from: UBERON:0000075 ! subdivision of skeleton
disjoint_from: UBERON:0000990 ! reproductive system
disjoint_from: UBERON:0001004 ! respiratory system
disjoint_from: UBERON:0001007 ! digestive system
disjoint_from: UBERON:0001008 ! urinary system
disjoint_from: UBERON:0001009 ! circulatory system
disjoint_from: UBERON:0001016 ! nervous system
disjoint_from: UBERON:0001032 ! sense organ system
disjoint_from: UBERON:0001033 ! gustatory system
disjoint_from: UBERON:0001434 ! skeleton
disjoint_from: UBERON:0002204 ! musculoskeletal system
disjoint_from: UBERON:0002294 ! biliary system
disjoint_from: UBERON:0002330 ! exocrine system
disjoint_from: UBERON:0002390 ! hematopoietic system
disjoint_from: UBERON:0002405 ! immune system
disjoint_from: UBERON:0002416 ! integumental system
disjoint_from: UBERON:0002423 ! hepatobiliary system
xref: ncithesaurus:Endocrine_System ! Endocrine System

[Term]
id: UBERON:0000950
name: gracilis
alt_id: UBERON:FBbt_00003277-FMA_43882-MA_0002311
def: "The most superficial muscle on the medial side of the thigh. It is thin and flattened, broad above, narrow and tapering below. It arises by a thin aponeurosis from the anterior margins of the lower half of the symphysis pubis and the upper half of the pubic arch." [Wikipedia:Gracilis]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "gracilis muscle" EXACT []
xref: FMA:43882 ! Gracilis
xref: galen:Gracilis
xref: MA:0002311 ! gracilis
is_a: UBERON:0001630 ! muscle organ
relationship: part_of UBERON:0002103 ! hindlimb
xref: ncithesaurus:Gracilis ! Gracilis
xref: BTO:0000536 ! gracilis muscle

[Term]
id: UBERON:0000951
name: rotator muscle
alt_id: UBERON:FBbt_00003314-FMA_23081
comment: This class was created automatically from a combination of ontologies
synonym: "Rotator muscle" EXACT []
xref: FMA:23081 ! Rotator muscle
is_a: UBERON:0001630 ! muscle organ

[Term]
id: UBERON:0000952
name: adductor muscle
alt_id: UBERON:FBbt_00003317-FMA_74998
def: "Muscle that causes adduction can be called an adductor muscle. For example in biology, the muscle or muscles in the interior of a bivalve mollusk which serve to close the valves are called adductor muscles, and the large foot to shell muscle in gastropods such as the abalone and limpet is also known as an adductor muscle." [Wikipedia:Adductor_muscle]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Adductor muscle" EXACT []
synonym: "Adductor muscle of hip" NARROW []
xref: FBbt:00003317 ! adductor muscle
xref: FMA:74998 ! Adductor muscle
is_a: UBERON:0001630 ! muscle organ

[Term]
id: UBERON:0000953
name: visceral muscle
alt_id: UBERON:FBbt_00003525-MIAA_0000303-XAO_0000175
def: "." [Wikipedia:Smooth_muscle]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "adult visceral muscle" RELATED []
synonym: "smooth muscle" EXACT []
xref: BTO:0001260
xref: EFO:0000889 ! smooth muscle
xref: FBbt:00003525 ! adult visceral muscle
xref: GAID:167 ! smooth muscle
xref: HOG:0001246 ! smooth muscle
xref: MAT:0000303 ! smooth muscle
xref: MIAA:0000303 ! smooth muscle
xref: WBbt:0005781 ! smooth muscle
xref: XAO:0000175 ! smooth muscle
is_a: UBERON:0001630 ! muscle organ
relationship: develops_from UBERON:0003081 ! lateral plate mesoderm

[Term]
id: UBERON:0000954
name: intestine muscle
alt_id: UBERON:FBbt_00003537-WBbt_0005796
def: "intestinal muscle cell, attach to intestine and body wall anterior to anus" [WB:Paper00000653]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "intestinal muscle" EXACT []
xref: BTO:0000643
xref: FBbt:00003537 ! intestine muscle
xref: WBbt:0005796 ! intestinal muscle
is_a: UBERON:0000953 ! visceral muscle
relationship: part_of UBERON:0000160 ! intestine

[Term]
id: UBERON:0000955
name: brain
alt_id: UBERON:FBbt_00003624-FBbt_00005095-FMA_50801-MA_0000168-MIAA_0000098-MIAA_0000341-WBbt_0005440-XAO_0000010-ZFA_0000008
def: "The supra-esophageal ganglion of the central nervous system, composed of three primitive ganglia known as protocerebrum, deutocerebrum and tritocerebrum. In the context of Drosophila refers to the preoral ganglionic mass of the central nervous system containing the ventral ganglia. // Organ component of neuraxis that has as its parts gray matter and white matter that surround the cerebral ventricular system; Examples: There is only one brain. // Organ that is a component of the central nervous system and is responsible for the coordination and control of bodily activities and the interpretation of information from the senses. It appears when the neural tube segregates in forebrain, midbrain, and hindbrain at NF stage 22. The general pattern of the brain has been mainly established at NF stage 28. Yolky material is consumed and the fibre tracts and later the commissures develop. In general all of its parts are well developed at NF stage 53 and later development consists mainly of growth and some further cytological differentiation. In the period of metamorphosis only topographical changes take place." [FB:gg, ISBN:0815318960, ISBN:3110148986, OMD:brain, Wikipedia:Brain]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Brain" EXACT []
synonym: "brain" EXACT []
synonym: "central nervous system" RELATED []
synonym: "synganglion" RELATED []
xref: BILA:0000135
xref: BTO:0000142
xref: EHDAA:2641 ! brain
xref: EHDAA:6485 ! brain
xref: FBbt:00003624 ! adult brain
xref: FBbt:00005095 ! brain
xref: FMA:50801 ! Brain
xref: GAID:571 ! brain
xref: galen:Brain
xref: HOG:0000157 ! brain
xref: MA:0000168 ! brain
xref: MAT:0000098 ! brain
xref: MIAA:0000098 ! brain
xref: NIF_GrossAnatomy:birnlex_796 ! Brain
xref: OpenCyc:Mx4rvVjT65wpEbGdrcN5Y29ycA
xref: TAO:0000008 ! brain
xref: XAO:0000010 ! brain
xref: ZFA:0000008 ! brain
is_a: UBERON:0000489 ! cavitated compound organ
relationship: develops_from UBERON:0001049 ! neural tube
relationship: part_of UBERON:0001017 ! central nervous system
xref: ncithesaurus:Brain ! Brain

[Term]
id: UBERON:0000956
name: cerebral cortex
alt_id: UBERON:FBbt_00003625-FMA_61830-MA_0000185-MIAA_0000108
def: "." [Wikipedia:Cerebral_cortex]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Cerebral cortex" EXACT []
synonym: "Cortex of cerebral hemisphere" EXACT []
synonym: "cortex of cerebral hemisphere" EXACT []
xref: BTO:0000233
xref: EFO:0000328 ! cerebral cortex
xref: EHDAA:5464 ! cerebral cortex
xref: FBbt:00003625 ! adult brain cortex
xref: FMA:61830 ! Cerebral cortex
xref: GAID:629 ! cerebral cortex
xref: HOG:0000722 ! cerebral cortex
xref: MA:0000185 ! cerebral cortex
xref: MAT:0000108 ! cerebral cortex
xref: MIAA:0000108 ! cerebral cortex
xref: NIF_GrossAnatomy:birnlex_1494 ! Cerebral cortex
is_a: UBERON:0000481 ! multi-tissue structure
relationship: part_of UBERON:0001869 ! cerebral hemisphere
xref: ncithesaurus:Cortex ! Cerebral Cortex

[Term]
id: UBERON:0000957
name: lamina
alt_id: UBERON:FBbt_00003708-FMA_67265
def: "Any thin layer or plate. In the context of Drosophila refers to the first optic neuropil." [http://flybrain.uni-freiburg.de/Flybrain/html/terms/terms.html, Wikipedia:Lamina]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "La" RELATED []
synonym: "Lamin A" EXACT []
synonym: "lamin a" EXACT []
xref: FBbt:00003708 ! lamina
xref: FMA:67265 ! Lamin A
is_a: UBERON:0000479 ! portion of tissue

[Term]
id: UBERON:0000958
name: medulla
alt_id: UBERON:FBbt_00003748-FMA_61108
def: "Middle part of an organ (as opposed to the cortex)[WP]." [Wikipedia:Medulla]
comment: This class is used in a very general sense
subset: uberon_slim
synonym: "Medulla" EXACT []
xref: FMA:61108 ! Medulla
is_a: UBERON:0000471 ! compound organ component
relationship: surrounded_by UBERON:0001851 ! cortex

[Term]
id: UBERON:0000959
name: optic chiasma
alt_id: UBERON:FBbt_00003921-FMA_62045-MA_0001098-ZFA_0000556
def: "The projection of axons between the lamina and medulla (1st optric chiasma) or between the medulla and lobula (2nd optic chiasma). The linear order of axons along each horizontal row of retinotopic columns (see optic cartridges) is reversed by the chiasma. // Nerve trunk which is continuous with right and left optic nerves and right and left optic tracts. // Decussation of cranial nerve II axons whereby some cross the midline and some remain ipsilateral." [http://flybrain.uni-freiburg.de/Flybrain/html/terms/terms.html, Wikipedia:Optic_chiasma, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Decussation of optic nerve fibers" EXACT []
synonym: "decussation of optic nerve fibers" EXACT []
synonym: "Optic chiasm" EXACT []
synonym: "optic chiasm" EXACT []
synonym: "Optic chiasma" EXACT []
xref: EHDAA:10227 ! optic chiasm
xref: FBbt:00003921 ! optic chiasma
xref: FMA:62045 ! Optic chiasm
xref: GAID:832 ! optic chiasm
xref: HOG:0000190 ! optic chiasm
xref: MA:0001098 ! optic chiasm
xref: NIF_GrossAnatomy:birnlex_1416 ! Optic chiasm
xref: TAO:0000556 ! optic chiasm
xref: ZFA:0000556 ! optic chiasm
is_a: UBERON:0000481 ! multi-tissue structure
relationship: part_of UBERON:0000941 ! optic nerve
relationship: part_of UBERON:0001894 ! diencephalon

[Term]
id: UBERON:0000960
name: pharyngeal nerve
alt_id: UBERON:FBbt_00004021-FMA_77524-WBbt_0005441
def: "." [Wikipedia:Pharyngeal_nerve]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Pharyngeal nerve" EXACT []
xref: FBbt:00004021 ! pharyngeal nerve
xref: FMA:77524 ! Pharyngeal nerve
xref: WBbt:0005441 ! pharyngeal nerve
is_a: UBERON:0001021 ! nerve
intersection_of: UBERON:0001021 ! nerve
intersection_of: part_of UBERON:0001042 ! pharynx

[Term]
id: UBERON:0000961
name: thoracic ganglion
alt_id: UBERON:FBbt_00004052-FMA_6471-MA_0001159
def: "." [Wikipedia:Thoracic_ganglion]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Thoracic ganglion" EXACT []
synonym: "Thoracic paravertebral ganglion" EXACT []
synonym: "thoracic paravertebral ganglion" EXACT []
synonym: "Thoracic splanchnic ganglion" EXACT []
synonym: "thoracic splanchnic ganglion" EXACT []
synonym: "Thoracic sympathetic ganglion" EXACT []
synonym: "thoracic sympathetic ganglion" EXACT []
xref: FBbt:00004052 ! thoracico-abdominal ganglion
xref: FMA:6471 ! Thoracic ganglion
xref: HOG:0000515 ! thoracic ganglion
xref: MA:0001159 ! thoracic ganglion
is_a: UBERON:0001807 ! paravertebral ganglion
intersection_of: UBERON:0000045 ! ganglion
intersection_of: part_of UBERON:0000915 ! thorax
relationship: part_of UBERON:0000915 ! thorax
relationship: part_of UBERON:0001017 ! central nervous system
xref: ncithesaurus:Thoracic_Ganglion ! Thoracic Ganglion
xref: BTO:0001831 ! thoracic ganglion

[Term]
id: UBERON:0000962
name: cervical nerve
alt_id: UBERON:FBbt_00004053-FMA_5859
def: "." [Wikipedia:Cervical_nerve]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Cervical nerve" EXACT []
synonym: "Cervical nerve tree" EXACT []
synonym: "cervical nerve tree" EXACT []
synonym: "Cervical spinal nerve" EXACT []
synonym: "cervical spinal nerve" EXACT []
xref: FBbt:00004053 ! cervical nerve
xref: FMA:5859 ! Cervical nerve
is_a: UBERON:0001780 ! spinal nerve
intersection_of: UBERON:0001021 ! nerve
intersection_of: part_of UBERON:0000002 ! cervix
relationship: part_of UBERON:0000961 ! thoracic ganglion
xref: ncithesaurus:Cervical_Nerve ! Cervical Nerve

[Term]
id: UBERON:0000963
name: head sensillum
alt_id: UBERON:FBbt_00004114-MIAA_0000204
comment: This class was created automatically from a combination of ontologies
xref: FBbt:00004114 ! head sensillum
xref: MAT:0000204 ! head sensillum
xref: MIAA:0000204 ! head sensillum
is_a: UBERON:0002536 ! arthropod sensillum

[Term]
id: UBERON:0000964
name: cornea
alt_id: UBERON:FBbt_00004191-FMA_58238-MA_0000266-XAO_0000180-ZFA_0000640
def: "transparent front part of the eye that covers the iris, pupil, and anterior chamber. Together with the lens, the cornea refracts light, accounting for approximately two-thirds of the eye's total optical power." [Wikipedia:Cornea]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Cornea" EXACT []
synonym: "tunica cornea" RELATED []
xref: BTO:0000286
xref: EFO:0000377 ! cornea
xref: EHDAA:10199 ! cornea
xref: FBbt:00004191 ! cornea
xref: FMA:58238 ! Cornea
xref: GAID:892 ! cornea
xref: HOG:0000164 ! cornea
xref: MA:0000266 ! cornea
xref: ncithesaurus:Cornea
xref: OpenCyc:Mx4rvViBa5wpEbGdrcN5Y29ycA
xref: TAO:0000640 ! cornea
xref: XAO:0000180 ! cornea
xref: ZFA:0000640 ! cornea
is_a: UBERON:0003102 ! surface structure
relationship: part_of UBERON:0000965 ! lens

[Term]
id: UBERON:0000965
name: lens
alt_id: UBERON:FBbt_00004199-FMA_58241-MA_0000275-MIAA_0000141-XAO_0000008-ZFA_0000035
def: "Transparent part of eye that helps to refract light to be focused on the retina." [Wikipedia:Lens_(anatomy)]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "eye lens" EXACT []
synonym: "Lens" EXACT []
xref: BTO:0000723
xref: EHDAA:9057 ! lens
xref: FMA:58241 ! Lens
xref: HOG:0000169 ! lens
xref: MA:0000275 ! lens
xref: MAT:0000141 ! lens
xref: MIAA:0000141 ! lens
xref: TAO:0000035 ! lens
xref: XAO:0000008 ! lens
xref: ZFA:0000035 ! lens
is_a: UBERON:0000064 ! organ part
relationship: develops_from UBERON:0003073 ! lens placode
relationship: part_of UBERON:0001801 ! anterior segment of eyeball
xref: ncithesaurus:Crystalline_Lens ! Lens

[Term]
id: UBERON:0000966
name: retina
alt_id: UBERON:FBbt_00004200-FMA_58301-MA_0000276-MIAA_0000142-XAO_0000009-ZFA_0000152
def: "The retina is the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates. // The array of photoreceptors & the cells that support them in a compound eye. // Layer of wall of eyeball which is continuous with optic nerve. // Sensory membrane that lines the posterior chamber of the eye and functions as the immediate instrument of vision by receiving the image formed by the lens and converting it into chemical and nervous signals which reach the brain by way of the optic nerve. // The portion of the eye developing from the optic primordium and including the neural retina and the retinal pigment layer. <a href='http://zfin.org/cgi-bin/ZFIN_jump?record=ZDB-PUB-961014-576'>Kimmel et al, 1995.</a>" [FB:ds, NLM:retina, Wikipedia:Retina, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Inner layer of eyeball" EXACT []
synonym: "inner layer of eyeball" EXACT []
synonym: "Retina" EXACT []
synonym: "Tunica interna of eyeball" EXACT []
synonym: "tunica interna of eyeball" EXACT []
xref: BTO:0001175
xref: EFO:0000832 ! retina
xref: EHDAA:4757 ! retina
xref: FBbt:00004200 ! retina
xref: FMA:58301 ! Retina
xref: GAID:755 ! retina
xref: HOG:0000229 ! retina
xref: MA:0000276 ! retina
xref: MAT:0000142 ! retina
xref: MIAA:0000142 ! retina
xref: ncithesaurus:Retina
xref: NIF_GrossAnatomy:birnlex_1153 ! Retina
xref: NIF_GrossAnatomy:birnlex_1156
xref: OpenCyc:Mx4rvViTfpwpEbGdrcN5Y29ycA
xref: TAO:0000152 ! retina
xref: XAO:0000009 ! retina
xref: ZFA:0000152 ! retina
is_a: UBERON:0000481 ! multi-tissue structure
relationship: develops_from UBERON:0003072 ! eye vesicle
relationship: part_of UBERON:0001802 ! posterior segment of eyeball

[Term]
id: UBERON:0000967
name: adult thoracic sensillum
alt_id: UBERON:FBbt_00004245-MIAA_0000205
comment: This class was created automatically from a combination of ontologies
synonym: "thoracic sensillum" EXACT []
xref: FBbt:00004245 ! adult thoracic sensillum
xref: MAT:0000205 ! thoracic sensillum
xref: MIAA:0000205 ! thoracic sensillum
is_a: UBERON:0002536 ! arthropod sensillum
intersection_of: UBERON:0002536 ! arthropod sensillum
intersection_of: part_of UBERON:0000915 ! thorax
relationship: part_of UBERON:0000915 ! thorax

[Term]
id: UBERON:0000968
name: adult abdominal sensillum
alt_id: UBERON:FBbt_00004461-MIAA_0000206
comment: This class was created automatically from a combination of ontologies
synonym: "abdominal sensillum" EXACT []
xref: FBbt:00004461 ! adult abdominal sensillum
xref: MAT:0000206 ! abdominal sensillum
xref: MIAA:0000206 ! abdominal sensillum
is_a: UBERON:0002536 ! arthropod sensillum
intersection_of: UBERON:0002536 ! arthropod sensillum
intersection_of: part_of UBERON:0000916 ! abdomen
relationship: part_of UBERON:0000916 ! abdomen

[Term]
id: UBERON:0000969
name: suture
alt_id: UBERON:FBbt_00004479-FMA_7493-MA_0001475
def: "The meeting line of two primary body plates, as a rule forming a furrow-like impression. // Fibrous joint in which the articulating bones or cartilages of the skull are connected by sutural ligaments (scant amount of collagenous dense connective tissue). Examples: sagittal suture, frontal suture." [ISBN:3110148986, Wikipedia:Suture]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Suture" EXACT []
xref: FBbt:00004479 ! suture
xref: FMA:7493 ! Suture
xref: HAO:0000982 ! suture
is_a: UBERON:0002209 ! fibrous joint

[Term]
id: UBERON:0000970
name: eye
alt_id: UBERON:FBbt_00004508-FMA_54448-MA_0000261-MIAA_0000140-XAO_0000179-ZFA_0000107
def: "organ that detects light" [http://en.wikipedia.org/wiki/Eye, UBERON:cjm, Wikipedia:Eye]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Eye" EXACT []
synonym: "eyes" RELATED []
synonym: "visual apparatus" RELATED []
xref: BILA:0000017
xref: BTO:0000439
xref: EFO:0000827 ! eye
xref: GAID:69 ! eye
xref: HOG:0000275 ! eye
xref: MAT:0000140 ! eye
xref: MIAA:0000140 ! eye
xref: ncithesaurus:Eye
xref: NIF_GrossAnatomy:birnlex_1169 ! Eye
xref: OpenCyc:Mx4rvViTvpwpEbGdrcN5Y29ycA
is_a: UBERON:0000020 ! sense organ
relationship: part_of UBERON:0002104 ! visual system
xref: FMA:54448 ! Eye

[Term]
id: UBERON:0000971
name: ommatidium
alt_id: UBERON:FBbt_00004510-MIAA_0000143
def: "One of the small facets of the compound eye." [ISBN:3110148986, Wikipedia:Ommatidium]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "omatidium" EXACT []
xref: FBbt:00004510 ! ommatidium
xref: HAO:0000666 ! ommatidium
xref: MAT:0000143 ! omatidium
xref: MIAA:0000143 ! omatidium
is_a: UBERON:0002536 ! arthropod sensillum
relationship: has_part UBERON:0000965 ! lens
relationship: part_of UBERON:0000018 ! compound eye
xref: BTO:0001922 ! ommatidium

[Term]
id: UBERON:0000972
name: antenna
alt_id: UBERON:FBbt_00004511-MIAA_0000086
def: "The paired, usually multiple jointed, sensory organs articulating on the procephalic region of the head capsule; its highly versatile sensory structures are capable to detect the various environmental stimuli. In the context of Drosophila refers to they are the most anterior segmented sensory appendage of the head." [FB:gg, ISBN:3110148986, Wikipedia:Antenna]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
xref: BTO:0000074
xref: EFO:0000874 ! antenna
xref: FBbt:00004511 ! antenna
xref: HAO:0000101 ! antenna
xref: MAT:0000086 ! antenna
xref: MIAA:0000086 ! antenna
is_a: UBERON:0000026 ! appendage
relationship: part_of UBERON:0000033 ! head

[Term]
id: UBERON:0000973
name: labrum
alt_id: UBERON:FBbt_00004522-FMA_76808
is_obsolete: true

[Term]
id: UBERON:0000974
name: neck
alt_id: UBERON:FBbt_00004550-FMA_7155-MA_0000024-MIAA_0000297
def: "Subdivision of body proper, which consists of a maximal set of diverse subclasses of organ and organ part spatially associated with the cervical vertebral coumn, it is partially surrounded by skin of neck. Examples: There is only one neck." [Wikipedia:Neck]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Neck" EXACT []
synonym: "Neck (volume)" EXACT []
synonym: "neck (volume)" EXACT []
xref: BTO:0000420
xref: FBbt:00004550 ! neck
xref: FMA:7155 ! Neck
xref: GAID:86 ! neck
xref: MA:0000024 ! neck
xref: MAT:0000297 ! neck
xref: MIAA:0000297 ! neck
is_a: UBERON:0000475 ! organism subdivision
xref: ncithesaurus:Neck ! Neck

[Term]
id: UBERON:0000975
name: vertebrate sternum
alt_id: UBERON:FBbt_00004557-FMA_7485-MA_0001331
def: "Long flat bone shaped like a capital 'T' located in the center of the thorax (chest)." [ISBN:3110148986, Wikipedia:Sternum]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "sternum" EXACT []
xref: AAO:0000765 ! sternum
xref: BTO:0001302
xref: FBbt:00004557 ! sternum
xref: FMA:7485 ! Sternum
xref: GAID:246 ! sternum
xref: HAO:0000956 ! sternum
xref: HOG:0000856 ! sternum
xref: MA:0001331 ! sternum
xref: OpenCyc:Mx4rvVjO6JwpEbGdrcN5Y29ycA
is_a: UBERON:0001474 ! bone
relationship: part_of UBERON:0000915 ! thorax
xref: ncithesaurus:Sternum ! Sternum

[Term]
id: UBERON:0000976
name: postpronotum
alt_id: UBERON:FBbt_00004562-FMA_13303-MA_0001356
def: "Long bone which is part of the arm." [Wikipedia:Humerus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "humeral callus" RELATED []
synonym: "Humerus" EXACT []
synonym: "humerus" RELATED []
synonym: "prescutal lobe" RELATED []
xref: AAO:0000679 ! humerus
xref: FBbt:00004562 ! postpronotum
xref: FMA:13303 ! Humerus
xref: GAID:183 ! humerus
xref: galen:Humerus
xref: HOG:0001158 ! humerus
xref: MA:0001356 ! humerus
is_a: UBERON:0001440 ! skeleton of upper limb
relationship: part_of UBERON:0001460 ! arm
relationship: part_of UBERON:0001467 ! shoulder
xref: ncithesaurus:Humerus ! Humerus

[Term]
id: UBERON:0000977
name: mesothoracic pleurum
alt_id: UBERON:FBbt_00004591-FMA_9583-MA_0000433
def: "." [Wikipedia:Pleura]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Pleura" EXACT []
synonym: "pleura" RELATED []
synonym: "Wall of pleural sac" EXACT []
synonym: "wall of pleural sac" EXACT []
xref: FBbt:00004591 ! mesothoracic pleurum
xref: FMA:9583 ! Pleura
xref: GAID:360 ! pleura
xref: HOG:0000394 ! pleura
xref: MA:0000433 ! pleura
xref: OpenCyc:Mx4rv3zwLZwpEbGdrcN5Y29ycA
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001004 ! respiratory system
relationship: part_of UBERON:0002402 ! pleural cavity
xref: ncithesaurus:Pleural_Tissue ! Pleura
xref: BTO:0001791 ! pleura

[Term]
id: UBERON:0000978 ! leg
name: leg
alt_id: UBERON:FBbt_00004640-FMA_24979-MA_0000047-MIAA_0000095
def: "A leg is a limb on which an animal walks and stands (GO:0035110)." [GO:0035110, Wikipedia:Leg]
comment: Functional grouping, currently encompasses vertebrate and insect legs
subset: uberon_slim
synonym: "Intermediate segment of free lower limb" NARROW []
synonym: "Leg" EXACT []
xref: BTO:0000721
xref: EHDAA:5151 ! leg
xref: EHDAA:6176 ! leg
xref: EHDAA:8289 ! leg
xref: FBbt:00004640 ! leg
xref: FMA:24979 ! Leg
xref: GAID:49 ! leg
xref: galen:Leg
xref: HAO:0000494 ! leg
xref: HOG:0000345 ! leg
xref: MA:0000047 ! leg
xref: MAT:0000095 ! limb sensu invertebrata
xref: MIAA:0000095 ! limb sensu invertebrata
xref: OpenCyc:Mx4rvViYzZwpEbGdrcN5Y29ycA
is_a: UBERON:0002101 ! limb
xref: ncithesaurus:Leg ! Leg

[Term]
id: UBERON:0000979
name: tibia
alt_id: UBERON:FBbt_00004642-FMA_24476-MA_0001361
def: "Larger and stronger of the two bones in the leg below the knee in vertebrates and connects the knee with the ankle bones." [Wikipedia:Tibia]
comment: Does not include the tibia segment of the arthropod leg FBbt:00004642
subset: uberon_slim
synonym: "shankbone" EXACT [Wikipedia:Tibia]
synonym: "shinbone" EXACT [Wikipedia:Tibia]
synonym: "Tibia" EXACT []
xref: AAO:0000890 ! tibia
xref: BTO:0001252
xref: FMA:24476 ! Tibia
xref: GAID:204 ! tibia
xref: MA:0001361 ! tibia
is_a: UBERON:0002495 ! long bone
relationship: part_of UBERON:0001441 ! skeleton of lower limb
xref: ncithesaurus:Tibia ! Tibia

[Term]
id: UBERON:0000980
name: trochanter
alt_id: UBERON:FBbt_00004643-FMA_82513
def: "part of the thigh bone." [Wikipedia:Trochanter]
comment: Excludes FBbt:00004643 HAO:0001034
subset: uberon_slim
synonym: "Trochanter" EXACT []
xref: FMA:82513 ! Trochanter
xref: MA:0002821 ! trochanter
is_a: UBERON:0000475 ! organism subdivision
relationship: part_of UBERON:0000978 ! leg
xref: ncithesaurus:Trochanter ! Trochanter

[Term]
id: UBERON:0000981
name: femur
alt_id: UBERON:FBbt_00004644-FMA_9611-MA_0001359
def: "The femur, or thigh bone, is the most proximal (closest to the body) bone of the leg in vertebrates capable of walking or jumping, such as most land mammals, birds, many reptiles such as lizards, and amphibians such as frogs. In vertebrates with four legs, the femur is found only in the rear legs. Some species of whales[1], snakes[2], and other non-walking vertebrates have vestigial femurs. One of the earliest known vertebrates to have a femur is the Eusthenopteron, a prehistoric lobe-finned fish from the Late Devonian period." [Wikipedia:Femur]
comment: exlcudes FBbt:00004644. In invertebrates, the name femur is also given to the most proximal full-length jointed segment of the legs of some arthropods such as spiders. excludes HAO:0000327
subset: uberon_slim
synonym: "Femur" EXACT []
synonym: "Thigh bone" EXACT []
synonym: "thigh bone" EXACT []
xref: AAO:0000889 ! femur
xref: BTO:0001284
xref: FMA:9611 ! Femur
xref: GAID:199 ! femur
xref: galen:Femur
xref: HOG:0001159 ! femur
xref: MA:0001359 ! femur
xref: OpenCyc:Mx4rvVjOJJwpEbGdrcN5Y29ycA
is_a: UBERON:0000475 ! organism subdivision
relationship: part_of UBERON:0001441 ! skeleton of lower limb
relationship: part_of UBERON:0001464 ! hip
xref: ncithesaurus:Femur ! Femur

[Term]
id: UBERON:0000982
name: joint
alt_id: UBERON:FBbt_00004645-FMA_228659-FMA_7490-MA_0000319-MIAA_0000188-XAO_0000171-ZFA_0001596
def: "Heterogeneous cluster which consists of two or more adjacent bones or cartilages, parts of which are interconnected by organ parts that consist of various types of connective tissue. Together with other joints and bones, a joint constitutes the skeletal system. Examples: pubic symphysis, knee joint, temporomandibular joint. // The point of contact between elements of the skeleton. // Anatomical cluster which consists of two or more adjacent bones or cartilages, which may be interconnected by various types of tissue." [NLM:joint, Wikipedia:Joint, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Joint" EXACT []
synonym: "Set of all joints" EXACT []
synonym: "set of all joints" BROAD []
xref: FBbt:00004645 ! joint
xref: FMA:7490 ! Joint
xref: GAID:102 ! joint
xref: galen:Joint
xref: HOG:0001276 ! joint
xref: MA:0000319 ! joint
xref: MAT:0000188 ! joint
xref: MIAA:0000188 ! joint
xref: OpenCyc:Mx4rvVjjdpwpEbGdrcN5Y29ycA
xref: TAO:0000367 ! joint
xref: XAO:0000171 ! joint
xref: ZFA:0001596 ! joint
is_a: UBERON:0000477 ! anatomical cluster
relationship: part_of UBERON:0000978 ! leg
xref: ncithesaurus:Joint ! Joint
xref: BTO:0001686 ! joint

[Term]
id: UBERON:0000983
name: metatarsus
alt_id: UBERON:FBbt_00004648-FMA_24997-MA_0000049
def: "Limb segment that consists of the long bones of the foot. The metatarsals are analogous to the metacarpal bones of the hand." [Wikipedia:Metatarsus]
comment: excludes FBbt:00004648
subset: uberon_slim
synonym: "Metatarsal part of foot" EXACT []
synonym: "metatarsal part of foot" EXACT []
synonym: "Metatarsal region" EXACT []
synonym: "metatarsal region" EXACT []
synonym: "Metatarsus" EXACT []
xref: FMA:24997 ! Metatarsus
xref: GAID:43 ! metatarsus
xref: MA:0000049 ! metatarsus
xref: XAO:0003212 ! metatarsus
xref: OpenCyc:Mx4rva_rBJwpEbGdrcN5Y29ycA
is_a: UBERON:0002529 ! limb segment
relationship: part_of UBERON:0002387 ! foot

[Term]
id: UBERON:0000984
name: thoracic wing
alt_id: UBERON:FBbt_00004729-MIAA_0000202
def: "A flight organ of the adult external thorax that is derived from a dorsal mesothoracic disc." [FB:gg]
comment: TODO: review. hymenoptera thorax = fusion of thorax and mesosoma/metasoma
subset: uberon_slim
synonym: "adult mesothoracic wing" RELATED []
synonym: "adult metathoracic wing" RELATED []
xref: FBbt:00004729 ! wing
xref: HAO:0001089 ! wing
is_a: UBERON:0000023 ! wing
intersection_of: UBERON:0000023 ! wing
intersection_of: part_of UBERON:0000915 ! thorax
relationship: develops_from UBERON:0000939 ! imaginal disc
relationship: part_of UBERON:0000914 ! segment

[Term]
id: UBERON:0000985
name: axillary vein
alt_id: UBERON:FBbt_00004754-FMA_13329-MA_0002084
def: "." [Wikipedia:Axillary_vein]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Axillary vein" EXACT []
synonym: "subcostal vein" RELATED []
xref: FBbt:00004754 ! axillary vein
xref: FMA:13329 ! Axillary vein
xref: GAID:527 ! axillary vein
xref: galen:AxillaryVein
xref: MA:0002084 ! axillary vein
is_a: UBERON:0001638 ! vein
relationship: part_of UBERON:0000481 ! multi-tissue structure
relationship: part_of UBERON:0001467 ! shoulder
xref: ncithesaurus:Axillary_Vein ! Axillary Vein

[Term]
id: UBERON:0000987
name: haltere
alt_id: UBERON:FBbt_00004783-MIAA_0000203
def: "The capitate stalk on both sides of the thorax having developed from the dorsal metathoracic wing-buds, it is freely movable and capable of vibration, representing the hind wing of Diptera; used for flight balance." [FB:gg, ISBN:3110148986, Wikipedia:Haltere]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "balancer organ" RELATED []
xref: EFO:0000886 ! haltere
xref: FBbt:00004783 ! haltere
xref: MAT:0000203 ! haltere
xref: MIAA:0000203 ! haltere
is_a: UBERON:0000026 ! appendage
relationship: develops_from UBERON:0000939 ! imaginal disc
relationship: part_of UBERON:0000914 ! segment

[Term]
id: UBERON:0000988
name: pons
alt_id: UBERON:FBbt_00004840-FMA_67943-MA_0000204-MIAA_0000115-ZFA_0001618
def: "A bridge-like component of the male terminalia. // Organ component of neuraxis that has as its parts the pontine tegmentum and basal part of pons. Examples: There is only one pons." [FB:gg, Wikipedia:Pons]
comment: TODO: check fly
subset: uberon_slim
synonym: "Pons" EXACT []
synonym: "Pons of Varolius" EXACT []
synonym: "pons of varolius" EXACT []
xref: BTO:0001101
xref: FBbt:00004840 ! pons
xref: FMA:67943 ! Pons
xref: GAID:578 ! pon
xref: HOG:0001176 ! pons
xref: MA:0000204 ! pons
xref: MAT:0000115 ! pons
xref: MIAA:0000115 ! pons
xref: NIF_GrossAnatomy:birnlex_733 ! Pons
xref: ZFA:0001618 ! pons
is_a: UBERON:0002680 ! regional part of metencephalon
relationship: part_of UBERON:0001895 ! metencephalon
relationship: part_of UBERON:0002298 ! brainstem

[Term]
id: UBERON:0000989
name: penis
alt_id: UBERON:FBbt_00004852-FMA_9707-MA_0000408-MIAA_0000186
def: "." [Wikipedia:Penis]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Penis" EXACT []
synonym: "phallus" RELATED []
xref: BTO:0000405
xref: FBbt:00004852 ! penis
xref: FMA:9707 ! Penis
xref: GAID:389 ! penis
xref: HOG:0000727 ! penis
xref: MA:0000408 ! penis
xref: MAT:0000186 ! penis
xref: MIAA:0000186 ! penis
xref: ncithesaurus:Penis
xref: OpenCyc:Mx4rvVjkCZwpEbGdrcN5Y29ycA
is_a: UBERON:0000062 ! organ
relationship: part_of UBERON:0000079 ! male reproductive system

[Term]
id: UBERON:0000990
name: reproductive system
alt_id: UBERON:FBbt_00004857-FMA_7160-MA_0000326-MIAA_0000305-WBbt_0005747-XAO_0000142-ZFA_0000632
def: "Anatomical system that has as its parts the organs concerned with reproduction." [NLM:genitourinary+tract, Wikipedia:Reproductive_system]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Genital system" RELATED []
synonym: "genital system" RELATED []
synonym: "genitalia" NARROW []
synonym: "Reproductive system" EXACT []
xref: BILA:0000103
xref: BTO:0000081
xref: EHDAA:5923 ! reproductive system
xref: FBbt:00004826 ! genitalia
xref: FBbt:00004857 ! reproductive system
xref: FMA:7160 ! Genital system
xref: HAO:0000374 ! genitalia
xref: HAO:0000895 ! reproductive system
xref: HOG:0000182 ! reproductive system
xref: MA:0000326 ! reproductive system
xref: MIAA:0000305 ! reproductive system
xref: OpenCyc:Mx4rvVja4ZwpEbGdrcN5Y29ycA
xref: TAO:0000632 ! reproductive system
xref: WBbt:0005747 ! reproductive system
xref: XAO:0000142 ! genital system
xref: ZFA:0000632 ! reproductive system
is_a: UBERON:0000467 ! anatomical system
intersection_of: UBERON:0000467 ! anatomical system
intersection_of: capable_of GO:0000003
disjoint_from: UBERON:0000075 ! subdivision of skeleton
disjoint_from: UBERON:0000949 ! endocrine system
disjoint_from: UBERON:0001004 ! respiratory system
disjoint_from: UBERON:0001007 ! digestive system
disjoint_from: UBERON:0001008 ! urinary system
disjoint_from: UBERON:0001009 ! circulatory system
disjoint_from: UBERON:0001016 ! nervous system
disjoint_from: UBERON:0001032 ! sense organ system
disjoint_from: UBERON:0001033 ! gustatory system
disjoint_from: UBERON:0001434 ! skeleton
disjoint_from: UBERON:0002204 ! musculoskeletal system
disjoint_from: UBERON:0002294 ! biliary system
disjoint_from: UBERON:0002330 ! exocrine system
disjoint_from: UBERON:0002390 ! hematopoietic system
disjoint_from: UBERON:0002405 ! immune system
disjoint_from: UBERON:0002416 ! integumental system
disjoint_from: UBERON:0002423 ! hepatobiliary system
relationship: develops_from UBERON:0000926 ! mesoderm
xref: ncithesaurus:Reproductive_System ! Reproductive System

[Term]
id: UBERON:0000991
name: gonad
alt_id: UBERON:FBbt_00004858-FMA_18250-MA_0002420-WBbt_0005175-XAO_0003146-ZFA_0000413
def: "organ that makes gametes [Wikipedia]. The organs of the reproductive system in which the germ cells reside. // General anatomical term which refers to ovary or testis. // organ producing either sperm or ova. // Reproductive organ that produces and releases eggs (ovary) or sperm (testis). // The part of the reproductive system that produces and releases eggs (ovary) or sperm (testis)." [FB:gg, ISBN:0140512888, Wikipedia:Gonad, ZFA:0000413, ZFIN:curator]
comment: FMA xref is a 'general anatomical term'
subset: uberon_slim
synonym: "Gonad" EXACT []
synonym: "Gonada" EXACT []
synonym: "gonada" EXACT []
xref: AAO:0000213 ! gonad
xref: BILA:0000123
xref: BTO:0000534
xref: FBbt:00004858 ! gonad
xref: FMA:18250 ! Gonad
xref: GAID:368 ! gonad
xref: HAO:0000379 ! gonad
xref: HOG:0000397 ! gonad
xref: MA:0002420 ! gonad
xref: TAO:0000413 ! gonad
xref: WBbt:0005175 ! gonad
xref: XAO:0003146 ! gonad
xref: ZFA:0000413 ! gonad
is_a: UBERON:0000489 ! cavitated compound organ
relationship: part_of UBERON:0000990 ! reproductive system
relationship: part_of UBERON:0002323 ! body cavity
relationship: site_of_production_of CL:0000300 ! gamete
xref: ncithesaurus:Gonad ! Gonad

[Term]
id: UBERON:0000992
name: ovary
alt_id: UBERON:FBbt_00004865-FMA_7209-MA_0000384-MIAA_0000125-XAO_0000258-ZFA_0000403
def: "Reproductive organ that produces and releases eggs. // Female reproductive organ." [Wikipedia:Ovary, XB:curator, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "ovaries" RELATED []
synonym: "Ovary" EXACT []
xref: AAO:0000371 ! ovary
xref: BILA:0000125
xref: BTO:0000975
xref: EHDAA:8124 ! ovary
xref: FBbt:00004865 ! ovary
xref: FMA:7209 ! Ovary
xref: GAID:367 ! ovary
xref: HOG:0000251 ! ovary
xref: MA:0000384 ! ovary
xref: MIAA:0000125 ! ovary
xref: ncithesaurus:Ovary
xref: OpenCyc:Mx4rvVi9QJwpEbGdrcN5Y29ycA
xref: TAO:0000403 ! ovary
xref: XAO:0000258 ! ovary
xref: ZFA:0000403 ! ovary
is_a: UBERON:0000991 ! gonad
relationship: part_of UBERON:0002355 ! pelvis

[Term]
id: UBERON:0000993
name: oviduct
alt_id: UBERON:FBbt_00004911-FMA_18245-MA_0000385-MIAA_0000126-XAO_0003052-ZFA_0000560
def: "passage from the ovaries to the outside of the body[Wikipedia:Oviduct]." [Wikipedia:Oviduct]
subset: uberon_slim
synonym: "uterine tube" EXACT []
xref: GAID:366 ! oviduct
xref: BTO:0000980
xref: FBbt:00004911 ! oviduct
xref: HOG:0001136 ! oviduct
xref: MAT:0000126 ! oviduct
xref: MIAA:0000126 ! oviduct
xref: ncithesaurus:Fallopian_Tube
xref: TAO:0000560 ! oviduct
xref: XAO:0003052 ! oviduct
xref: ZFA:0000560 ! oviduct
is_a: UBERON:0000058 ! duct
relationship: connects UBERON:0000992 ! ovary

[Term]
id: UBERON:0003889
name: fallopian tube
def: "Two very fine tubes lined with ciliated epithelia, leading from the ovaries of female mammals into the uterus, via the utero-tubal junction[WP]. Embryos have two pairs of ducts to let gametes out of the body; one pair (the Mullerian ducts) develops in females into the Fallopian tubes, uterus and vagina, while the other pair (the Wolffian ducts) develops in males into the epididymis and vas deferens." [Wikipedia:Fallopian_tube]
comment: http://en.wikipedia.org/wiki/Talk:Fallopian_tube#Homology
subset: uberon_slim
synonym: "fallopian tubes" RELATED []
synonym: "mammalian oviduct" RELATED []
xref: FMA:18245 ! Uterine tube
xref: GAID:365 ! fallopian tube
xref: galen:FallopianTube
xref: MA:0000385 ! oviduct
xref: OpenCyc:Mx4rvViVeZwpEbGdrcN5Y29ycA
is_a: UBERON:0000993 ! oviduct
relationship: part_of UBERON:0002355 ! pelvis
relationship: connects UBERON:0001179 ! peritoneal cavity
relationship: connects UBERON:0000995 ! uterus
relationship: develops_from UBERON:0003890 ! mullerian duct

[Term]
id: UBERON:0003890
name: Mullerian duct
def: "paired ducts of the embryo that run down the lateral sides of the urogenital ridge and terminate at the mullerian eminence in the primitive urogenital sinus. In the female, they will develop to form the fallopian tubes, uterus, and the upper portion of the vagina; in the male, they are lost. These ducts are made of tissue of mesodermal origin[WP]." [Wikipedia:Mullerian_duct]
synonym: "Müllerian_duct" EXACT []
is_a: UBERON:0002050 ! embryonic structure
relationship: develops_from UBERON:0000926 ! mesoderm
xref: GAID:1309 ! mullerian duct
xref: XAO:0000330 ! Mullerian duct

[Term]
id: UBERON:0000994
name: spermathecum
alt_id: UBERON:FBbt_00004921-MIAA_0000168-WBbt_0005319
def: "an accordion-like tube that contains sperm and is the site of oocyte fertilization." [WA:dh]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "seminal receptacle" RELATED []
synonym: "spermatheca" RELATED []
xref: FBbt:00004921 ! spermathecum
xref: MAT:0000168 ! spermathecum
xref: MIAA:0000168 ! spermathecum
xref: WBbt:0005319 ! spermatheca
is_a: UBERON:0000061 ! anatomical structure
relationship: part_of UBERON:0000991 ! gonad
relationship: part_of UBERON:0002537 ! hermaphrodite gonad

[Term]
id: UBERON:0000995
name: uterus
alt_id: UBERON:FBbt_00004924-FMA_17558-MA_0000389-MIAA_0000127-WBbt_0006760
def: "Organ with organ cavity which is continuous proximally with the right and left uterine tubes and distally is connected to the vagina. Examples: There is only one uterus. // The organ in which the eggs are developed and protected until laid." [ISBN:0198611862, WB:rynl, Wikipedia:Uterus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "uterine horn" RELATED []
synonym: "uterine horns" RELATED []
synonym: "Uterus" EXACT []
xref: FBbt:00004924 ! uterus
xref: FMA:17558 ! Uterus
xref: GAID:172 ! uterus
xref: HOG:0001137 ! uterus
xref: MA:0000389 ! uterus
xref: MAT:0000127 ! uterus
xref: MIAA:0000127 ! uterus
xref: ncithesaurus:Uterus
xref: OpenCyc:Mx4rvViojJwpEbGdrcN5Y29ycA
xref: WBbt:0006760 ! uterus
is_a: UBERON:0000062 ! organ
relationship: part_of UBERON:0000991 ! gonad
relationship: part_of UBERON:0002355 ! pelvis
xref: BTO:0001424 ! uterus

[Term]
id: UBERON:0000996
name: vagina
alt_id: UBERON:FBbt_00004925-FMA_19949-MA_0000394-MIAA_0000128
def: "Organ with organ cavity which connects the cervical canal of uterus to the vestibule of vagina. Examples: There is only one vagina." [Wikipedia:Vagina]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Vagina" EXACT []
xref: BTO:0000243
xref: FBbt:00004925 ! vagina
xref: FMA:19949 ! Vagina
xref: GAID:381 ! vagina
xref: HOG:0001138 ! vagina
xref: MA:0000394 ! vagina
xref: MAT:0000128 ! vagina
xref: MIAA:0000128 ! vagina
xref: ncithesaurus:Vagina
xref: OpenCyc:Mx4rvVj1B5wpEbGdrcN5Y29ycA
is_a: UBERON:0000062 ! organ
relationship: part_of UBERON:0000474 ! female reproductive system

[Term]
id: UBERON:0000997
name: vulva
alt_id: UBERON:FBbt_00004926-FMA_20462-FMA_225311-MA_0000395-MIAA_0000169-WBbt_0006748
def: "female genitalia" [WB:rynl, Wikipedia:Vulva]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Female pudendum" EXACT []
synonym: "female pudendum" EXACT []
synonym: "Puboperineal region" EXACT []
synonym: "puboperineal region" EXACT []
synonym: "Skin of female pudendum" EXACT []
synonym: "skin of female pudendum" EXACT []
synonym: "Skin of vulva" EXACT []
synonym: "skin of vulva" EXACT []
synonym: "Vulva" EXACT []
xref: BTO:0001055
xref: FBbt:00004926 ! vulva
xref: FMA:20462 ! Vulva
xref: GAID:383 ! vulva
xref: HAO:0001087 ! vulva
xref: HOG:0001458 ! vulva
xref: MA:0000395 ! vulva
xref: MAT:0000169 ! vulva
xref: MIAA:0000169 ! vulva
xref: ncithesaurus:Vulva
xref: OpenCyc:Mx4rvgAWeJwpEbGdrcN5Y29ycA
xref: WBbt:0006748 ! vulva
is_a: UBERON:0000477 ! anatomical cluster
relationship: part_of UBERON:0002355 ! pelvis

[Term]
id: UBERON:0000998
name: seminal vesicle
alt_id: UBERON:FBbt_00004958-FMA_19386-MA_0000410-MIAA_0000171-WBbt_0006870
def: "part of male gonad that holds mature sperm, made of a total of 12 nuclei." [WB:Paper00000193, WB:rynl, Wikipedia:Seminal_vesicle]
comment: The mesonephros persists and form the permanent kidneys in fishes and amphibians, but in reptiles, birds, and mammals, it atrophies and for the most part disappears rapidly as the permanent kidney (metanephros) begins to develop during the sixth or seventh week. By the beginning of the fifth month only the ducts and a few of the tubules of the mesonephros remain.
subset: uberon_slim
synonym: "gon_male_sves" RELATED []
synonym: "Seminal gland" EXACT []
synonym: "seminal gland" EXACT []
synonym: "Seminal vesicle" EXACT []
synonym: "vas efferens" RELATED []
xref: BTO:0001234
xref: FBbt:00004958 ! seminal vesicle
xref: FMA:19386 ! Seminal vesicle
xref: GAID:394 ! seminal vesicle
xref: HOG:0001379 ! seminal vesicle
xref: MA:0000410 ! seminal vesicle
xref: MAT:0000171 ! seminal vesicle
xref: MIAA:0000171 ! seminal vesicle
xref: WBbt:0006870 ! seminal vesicle
is_a: UBERON:0002530 ! gland
relationship: develops_from UBERON:0000080 ! mesonephros
relationship: part_of UBERON:0002117 ! testicle
xref: ncithesaurus:Seminal_Vesicle ! Seminal Vesicle

[Term]
id: UBERON:0000999
name: ejaculatory duct
alt_id: UBERON:FBbt_00004965-FMA_19325-MIAA_0000170
def: "." [Wikipedia:Ejaculatory_duct]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Ejaculatory duct" EXACT []
xref: FBbt:00004965 ! ejaculatory duct
xref: FMA:19325 ! Ejaculatory duct
xref: GAID:388 ! ejaculatory duct
xref: MAT:0000170 ! ejaculatory duct
xref: MIAA:0000170 ! ejaculatory duct
is_a: UBERON:0000058 ! duct
relationship: part_of UBERON:0000990 ! reproductive system
xref: ncithesaurus:Ejaculatory_Duct ! Ejaculatory Duct
xref: BTO:0001580 ! ejaculatory duct

[Term]
id: UBERON:0001000
name: vas deferens
alt_id: UBERON:FBbt_00004968-FMA_19234-MA_0000413-MIAA_0000129-WBbt_0005337
def: "duct that transports sperm. In mammals this is from the epididymis." [Wikipedia:Vas_deferens]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Deferent duct" EXACT []
synonym: "deferent duct" RELATED []
synonym: "ductus deferens" RELATED [Wikipedia:Vas_deferens]
synonym: "sperm duct" RELATED []
synonym: "vas deferen" EXACT []
synonym: "Vas deferens" EXACT []
synonym: "vasa deferentia" RELATED []
xref: FBbt:00004968 ! vas deferens
xref: FMA:19234 ! Deferent duct
xref: GAID:404 ! vas deferen
xref: HAO:0001052 ! vas deferens
xref: MA:0000413 ! vas deferens
xref: MIAA:0000129 ! ductus deferens
xref: WBbt:0005337 ! vas deferen
xref: ncithesaurus:Vas_Deferens ! Vas Deferens
xref: BTO:0001427 ! vas deferens
is_a: UBERON:0000058 ! duct

[Term]
id: UBERON:0001001
name: chitin-based cuticle
alt_id: UBERON:FBbt_00004970
def: "The outer non-living layer of the integumentary system derived from the epidermis. The main structural component of arthropod cuticle is a polysaccharide, chitin, composed of N-acetylglucosamine units, together with proteins and lipids." [FB:gg, UBERON:cjm, Wikipedia:Exoskeleton]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "arthropod cuticle" RELATED []
synonym: "exoskeleton" EXACT []
synonym: "insect cuticle" RELATED []
xref: FBbt:00004970 ! cuticle
xref: MAT:0000150 ! exoskeleton
xref: OpenCyc:Mx4rvVkBTJwpEbGdrcN5Y29ycA
is_a: UBERON:0001002 ! cuticle

[Term]
id: UBERON:0001002
name: cuticle
alt_id: UBERON:FBbt_00004970-MIAA_0000150-WBbt_0005755
def: "tough but flexible, non-mineral outer coverings of an organism, or parts of an organism, that provide protection. Cuticles are non-homologous, differing in their origin, structure and chemical composition. [Wikipedia]. The outer non-living layer of the integumentary system derived from the epidermis." [Wikipedia:Cuticle, Wikipedia:Eponychium]
comment: TODO - check cuticle vs eponychium
subset: uberon_slim
xref: FBbt:00004970 ! cuticle
xref: HAO:0000240 ! cuticle
xref: MA:0002704 ! cuticle
xref: FMA:77859 ! Eponychium
xref: MIAA:0000150 ! exoskeleton
is_a: UBERON:0000476 ! acellular anatomical structure
relationship: develops_from UBERON:0001003 ! epidermis
xref: BTO:0001600 ! cuticle

[Term]
id: UBERON:0001003
name: epidermis
alt_id: UBERON:FBbt_00004993-FBbt_00005401-FMA_70596-MA_0000153-MIAA_0000154-WBbt_0005733-XAO_0000028-ZFA_0000105
def: "The outermost layer of the ectoderm. // epidermal layer // The outer epithelial layer of the external integument of the body that is derived from the embryonic epiblast. // A cellular, multilayered epithelium derived from the ectoderm. Zebrafish epidermis consists only of living cells unlike terrestrial vertebrates in which dead, keratinized cells are present. <a href='http://zfin.org/cgi-bin/ZFIN_jump?record=ZDB-PUB-040726-12'>Le Guellec et al, 2004.</a>" [BTO:0000404, FB:gg, WB:pws, Wikipedia:Epidermis, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "adult epidermis" EXACT []
synonym: "Epidermis" EXACT []
synonym: "hypoderm" RELATED []
synonym: "hypodermis" RELATED []
synonym: "skin" BROAD []
xref: AAO:0000143 ! epidermis
xref: BTO:0000404
xref: FBbt:00004993 ! epidermis
xref: FBbt:00005401 ! adult epidermis
xref: FMA:70596 ! Epidermis
xref: GAID:932 ! epidermis
xref: HAO:0000298 ! epidermis
xref: HOG:0000077 ! epidermis
xref: MA:0000153 ! epidermis
xref: MAT:0000154 ! epidermis
xref: MIAA:0000154 ! epidermis
xref: TAO:0000105 ! epidermis
xref: WBbt:0005733 ! hypodermis
xref: XAO:0000028 ! epidermis
xref: ZFA:0000105 ! epidermis
is_a: UBERON:0000486 ! multilaminar epithelium
relationship: part_of UBERON:0002097 ! skin
xref: ncithesaurus:Epidermis ! Epidermis

[Term]
id: UBERON:0001004
name: respiratory system
alt_id: UBERON:FBbt_00005024-FMA_7158-MA_0000327-MIAA_0000030-XAO_0000117-ZFA_0000272
def: ". // Functional system which consists of structures involved in respiration. // Anatomical system that has as its parts the organs involved in breathing in respiration (breathing)." [FB:FBrf0064787, OMD:respiratory+apparatus, Wikipedia:Respiratory_system]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Apparatus respiratorius" EXACT []
synonym: "apparatus respiratorius" EXACT []
synonym: "Respiratory system" EXACT []
synonym: "respiratory system" EXACT []
xref: AAO:0000541 ! respiratory_system
xref: BTO:0000203
xref: EFO:0000804 ! respiratory system
xref: EHDAA:2203 ! respiratory system
xref: FMA:7158 ! Respiratory system
xref: GAID:78 ! respiratory system
xref: HOG:0000202 ! respiratory system
xref: MA:0000327 ! respiratory system
xref: MAT:0000030 ! respiratory system
xref: MIAA:0000030 ! respiratory system
xref: OpenCyc:Mx4rvVjzFJwpEbGdrcN5Y29ycA
xref: TAO:0000272 ! respiratory system
xref: XAO:0000117 ! respiratory system
xref: ZFA:0000272 ! respiratory system
is_a: UBERON:0000467 ! anatomical system
disjoint_from: UBERON:0000075 ! subdivision of skeleton
disjoint_from: UBERON:0000949 ! endocrine system
disjoint_from: UBERON:0000990 ! reproductive system
disjoint_from: UBERON:0001007 ! digestive system
disjoint_from: UBERON:0001008 ! urinary system
disjoint_from: UBERON:0001009 ! circulatory system
disjoint_from: UBERON:0001016 ! nervous system
disjoint_from: UBERON:0001032 ! sense organ system
disjoint_from: UBERON:0001033 ! gustatory system
disjoint_from: UBERON:0001434 ! skeleton
disjoint_from: UBERON:0002204 ! musculoskeletal system
disjoint_from: UBERON:0002294 ! biliary system
disjoint_from: UBERON:0002330 ! exocrine system
disjoint_from: UBERON:0002390 ! hematopoietic system
disjoint_from: UBERON:0002405 ! immune system
disjoint_from: UBERON:0002416 ! integumental system
disjoint_from: UBERON:0002423 ! hepatobiliary system
xref: ncithesaurus:Respiratory_System ! Respiratory System

[Term]
id: UBERON:0001005
name: trachea
alt_id: UBERON:FBbt_00005043-FMA_7394-MA_0000441-MIAA_0000137-XAO_0000118
def: "An airway through which respiratory air passes in organisms." [Wikipedia:Trachea]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Trachea" EXACT []
synonym: "Windpipe" EXACT []
synonym: "windpipe" EXACT []
xref: BTO:0001388
xref: EHDAA:3078 ! trachea
xref: FBbt:00005043 ! trachea
xref: FMA:7394 ! Trachea
xref: GAID:361 ! trachea
xref: HOG:0000371 ! trachea
xref: MA:0000441 ! trachea
xref: MAT:0000137 ! trachea
xref: MIAA:0000137 ! trachea
xref: OpenCyc:Mx4rvViOX5wpEbGdrcN5Y29ycA
xref: XAO:0000118 ! trachea
is_a: UBERON:0000063 ! organ segment
relationship: part_of UBERON:0001004 ! respiratory system
relationship: part_of UBERON:0001558 ! lower respiratory tract
relationship: part_of UBERON:0002224 ! thoracic cavity
xref: ncithesaurus:Trachea ! Trachea

[Term]
id: UBERON:0001006
name: spiracle
alt_id: UBERON:FBbt_00005054-MIAA_0000208
def: "The mostly slit-like opening on the body surface through which air is taken into the respiratory system." [ISBN:3110148986, Wikipedia:Spiracle]
comment: This class was created automatically from a combination of ontologies. In elasmobranchs (sharks and rays), a spiracle is found behind each eye, and is often used to pump water through the gills while the animal is at rest (Fouts, 2003). A spiracle is also found in primitive bony fishes as the chirrups.
subset: uberon_slim
synonym: "spiracular gland" RELATED []
xref: FBbt:00005054 ! spiracle
xref: HAO:0000950 ! spiracle
xref: MAT:0000208 ! spiracle
xref: MIAA:0000208 ! spiracle
is_a: UBERON:0000061 ! anatomical structure
relationship: part_of UBERON:0001004 ! respiratory system

[Term]
id: UBERON:0001007
name: digestive system
alt_id: UBERON:FBbt_00005055-FMA_7152-MA_0000323-MIAA_0000018-WBbt_0005748-XAO_0000125-ZFA_0000339
def: "The organ system involved in the absorption of nutrients. // Anatomical system that has as its parts the organs devoted to the ingestion, digestion, and assimilation of food and the discharge of residual wastes." [FB:gg, NLM:alimentary+system, Wikipedia:Digestive_system]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Alimentary system" EXACT []
synonym: "alimentary system" RELATED []
synonym: "alimentary tract" RELATED []
synonym: "Digestive system" EXACT []
synonym: "gastrointestinal system" EXACT []
synonym: "gut" RELATED []
xref: AAO:0000129 ! digestive_system
xref: BILA:0000082
xref: EHDAA:514 ! alimentary system
xref: FBbt:00005055 ! digestive system
xref: FMA:7152 ! Alimentary system
xref: GAID:278 ! digestive system
xref: GAID:294 ! gastrointestinal system
xref: galen:DigestiveSystem
xref: HOG:0000412 ! alimentary system
xref: MA:0000323 ! gastrointestinal system
xref: MAT:0000018 ! digestive system
xref: MIAA:0000018 ! digestive system
xref: ncithesaurus:Gastrointestinal_System
xref: TAO:0000339 ! digestive system
xref: WBbt:0005748 ! alimentary system
xref: XAO:0000125 ! alimentary system
xref: ZFA:0000339 ! digestive system
is_a: UBERON:0000467 ! anatomical system
disjoint_from: UBERON:0000075 ! subdivision of skeleton
disjoint_from: UBERON:0000949 ! endocrine system
disjoint_from: UBERON:0000990 ! reproductive system
disjoint_from: UBERON:0001004 ! respiratory system
disjoint_from: UBERON:0001008 ! urinary system
disjoint_from: UBERON:0001009 ! circulatory system
disjoint_from: UBERON:0001016 ! nervous system
disjoint_from: UBERON:0001032 ! sense organ system
disjoint_from: UBERON:0001033 ! gustatory system
disjoint_from: UBERON:0001434 ! skeleton
disjoint_from: UBERON:0002204 ! musculoskeletal system
disjoint_from: UBERON:0002294 ! biliary system
disjoint_from: UBERON:0002330 ! exocrine system
disjoint_from: UBERON:0002390 ! hematopoietic system
disjoint_from: UBERON:0002405 ! immune system
disjoint_from: UBERON:0002416 ! integumental system
disjoint_from: UBERON:0002423 ! hepatobiliary system

[Term]
id: UBERON:0001008
name: urinary system
alt_id: UBERON:FBbt_00005056-FMA_7159-MIAA_0000027-WBbt_0005736-XAO_0000143-ZFA_0000163
def: "Anatomical system that has as its parts the organs concerned with the production and excretion of urine." [NLM:genitourinary+tract, Wikipedia:Excretory_system]
comment: In various sources such as Encyclopedia Britannica, the excretory and urinary systems are indeed the same system (see wikipedia talk page)
subset: uberon_slim
synonym: "excretory system" EXACT []
synonym: "renal system" EXACT []
synonym: "renal/urinary system" RELATED []
synonym: "Systema urinaria" EXACT []
synonym: "systema urinaria" EXACT []
synonym: "Urinary system" EXACT []
synonym: "urinary system" RELATED []
xref: BILA:0000015
xref: EFO:0000803 ! renal system
xref: FBbt:00005056 ! excretory system
xref: FMA:7159 ! Urinary system
xref: GAID:391 ! urinary system
xref: HOG:0000723 ! renal system
xref: MAT:0000027 ! renal system
xref: MIAA:0000027 ! renal system
xref: ncithesaurus:Urinary_System
xref: TAO:0000163 ! renal system
xref: WBbt:0005736 ! excretory system
xref: XAO:0000143 ! urinary system
xref: ZFA:0000163 ! renal system
is_a: UBERON:0000467 ! anatomical system
disjoint_from: UBERON:0000075 ! subdivision of skeleton
disjoint_from: UBERON:0000949 ! endocrine system
disjoint_from: UBERON:0000990 ! reproductive system
disjoint_from: UBERON:0001004 ! respiratory system
disjoint_from: UBERON:0001007 ! digestive system
disjoint_from: UBERON:0001009 ! circulatory system
disjoint_from: UBERON:0001016 ! nervous system
disjoint_from: UBERON:0001032 ! sense organ system
disjoint_from: UBERON:0001033 ! gustatory system
disjoint_from: UBERON:0001434 ! skeleton
disjoint_from: UBERON:0002204 ! musculoskeletal system
disjoint_from: UBERON:0002294 ! biliary system
disjoint_from: UBERON:0002330 ! exocrine system
disjoint_from: UBERON:0002390 ! hematopoietic system
disjoint_from: UBERON:0002405 ! immune system
disjoint_from: UBERON:0002416 ! integumental system
disjoint_from: UBERON:0002423 ! hepatobiliary system
xref: BTO:0003092 ! urinary system

[Term]
id: UBERON:0001009
name: circulatory system
alt_id: UBERON:FBbt_00005057-FMA_7161-MA_0000010-MIAA_0000016-XAO_0000100-ZFA_0000010
def: "Organ system which consists of the heart, the systemic and pulmonary arterial and venous system, the lymphatic and the portal venous system. // Anatomical system that has as its parts the heart and blood vessels." [BTO:0000088, Wikipedia:Circulatory_system]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Cardiovascular system" EXACT []
synonym: "cardiovascular system" EXACT []
xref: BILA:0000016
xref: BTO:0000088
xref: EFO:0000791 ! cardiovascular system
xref: EHDAA:394 ! cardiovascular system
xref: FBbt:00005057 ! circulatory system
xref: FMA:7161 ! Cardiovascular system
xref: GAID:467 ! cardiovascular system
xref: HOG:0000302 ! cardiovascular system
xref: MA:0000010 ! cardiovascular system
xref: MAT:0000016 ! cardiovascular system
xref: MIAA:0000016 ! cardiovascular system
xref: OpenCyc:Mx4rvVjzG5wpEbGdrcN5Y29ycA
xref: TAO:0000010 ! cardiovascular system
xref: XAO:0000100 ! cardiovascular system
xref: ZFA:0000010 ! cardiovascular system
is_a: UBERON:0000467 ! anatomical system
disjoint_from: UBERON:0000075 ! subdivision of skeleton
disjoint_from: UBERON:0000949 ! endocrine system
disjoint_from: UBERON:0000990 ! reproductive system
disjoint_from: UBERON:0001004 ! respiratory system
disjoint_from: UBERON:0001007 ! digestive system
disjoint_from: UBERON:0001008 ! urinary system
disjoint_from: UBERON:0001016 ! nervous system
disjoint_from: UBERON:0001032 ! sense organ system
disjoint_from: UBERON:0001033 ! gustatory system
disjoint_from: UBERON:0001434 ! skeleton
disjoint_from: UBERON:0002204 ! musculoskeletal system
disjoint_from: UBERON:0002294 ! biliary system
disjoint_from: UBERON:0002330 ! exocrine system
disjoint_from: UBERON:0002390 ! hematopoietic system
disjoint_from: UBERON:0002405 ! immune system
disjoint_from: UBERON:0002416 ! integumental system
disjoint_from: UBERON:0002423 ! hepatobiliary system
xref: ncithesaurus:Cardiovascular_System ! Cardiovascular System

[Term]
id: UBERON:0001011
name: hemolymph
alt_id: UBERON:FBbt_00005061-MIAA_0000054
def: "Blood analogue used by all arthropods and most mollusks that have an open circulatory system. In these animals there is no distinction between blood and interstitial fluid. The liquid fills all of the interior (the hemocoel) of the body and surrounds all cells." [Wikipedia:Hemolymph]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "haemolymph" RELATED []
xref: BTO:0000572
xref: FBbt:00005061 ! hemolymph
xref: GAID:1220 ! hemolymph
xref: MAT:0000054 ! hemolymph
xref: MIAA:0000054 ! hemolymph
is_a: UBERON:0000463 ! portion of organism substance
relationship: part_of UBERON:0002193 ! hemolymphoid system

[Term]
id: UBERON:0001013
name: adipose tissue
alt_id: UBERON:FBbt_00005065-FMA_20110-MA_0000009-MIAA_0000015-XAO_0003049
def: "Dense irregular connective tissue, which predominantly consists of adipocytes. // Connective tissue in which fat is stored." [NLM:adipose+tissue, Wikipedia:Adipose_tissue]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "fat tissue" EXACT []
synonym: "fatty tissue" EXACT []
xref: AAO:0000001 ! adipose_tissue
xref: EFO:0000234 ! adipose tissue
xref: EFO:0000790 ! fat tissue
xref: FBbt:00005065 ! adipose system
xref: FMA:20110 ! Adipose tissue
xref: GAID:920 ! adipose tissue
xref: galen:FattyTissue
xref: HOG:0001284 ! adipose tissue
xref: MA:0000009 ! adipose tissue
xref: MAT:0000015 ! fat tissue
xref: MIAA:0000015 ! fat tissue
xref: OpenCyc:Mx4rvVjc_ZwpEbGdrcN5Y29ycA
xref: XAO:0003049 ! adipose tissue
is_a: UBERON:0000479 ! portion of tissue
xref: ncithesaurus:Adipose_Tissue ! Adipose Tissue
xref: BTO:0001487 ! adipose tissue

[Term]
id: UBERON:0001014
name: fat body
alt_id: UBERON:FBbt_00005066-FMA_58616-MA_0002481-MIAA_0000096-XAO_0003050
def: ". // The invertebrate tissue where a great deal of catabolic and anabolic activity occurs" [FB:FBrf0031020, FB:gg, Wikipedia:Fat_pad]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Fat body" EXACT []
synonym: "Fat pad" EXACT []
synonym: "fat pad" EXACT []
xref: AAO:0000157 ! fat_bodies
xref: BTO:0000442
xref: BTO:0000444
xref: FBbt:00005066 ! fat body
xref: FMA:58616 ! Fat body
xref: GAID:1213 ! fat body
xref: MA:0002481 ! fat pad
xref: MIAA:0000096 ! fat body
xref: XAO:0003050 ! fat body
is_a: UBERON:0000062 ! organ
relationship: part_of UBERON:0001013 ! adipose tissue

[Term]
id: UBERON:0001015
name: muscle system
alt_id: UBERON:FBbt_00005069-FMA_30316-FMA_32558-MA_0000015-MIAA_0000025-WBbt_0005737-XAO_0000172-ZFA_0000548-ZFA_0005145
def: "Anatomical system that allows the animal move, includes all muscles." [BTO:0000887, WB:rynl, Wikipedia:Muscular_system, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Muscle group" EXACT []
synonym: "muscle group" EXACT []
synonym: "Muscles" EXACT []
synonym: "muscles" RELATED []
synonym: "Muscles set" EXACT []
synonym: "muscles set" EXACT []
synonym: "muscular system" EXACT []
synonym: "musculature" EXACT []
synonym: "musculature system" RELATED []
synonym: "Set of muscles" EXACT []
synonym: "set of muscles" EXACT []
xref: BTO:0000887
xref: FBbt:00005069 ! muscle system
xref: FMA:32558 ! Musculature
xref: HOG:0001245 ! muscle
xref: MA:0002888 ! musculature
xref: MAT:0000025 ! muscle system
xref: MIAA:0000025 ! muscle system
xref: TAO:0000548 ! musculature system
xref: WBbt:0005737 ! muscular system
xref: ZFA:0000548 ! musculature system
is_a: UBERON:0000467 ! anatomical system
relationship: part_of UBERON:0002204 ! musculoskeletal system
xref: ncithesaurus:Muscle ! Muscle

[Term]
id: UBERON:0001016
name: nervous system
alt_id: UBERON:FBbt_00005093-FMA_7157-MA_0000016-MIAA_0000026-WBbt_0005735-XAO_0000177-ZFA_0000396
def: "a network of specialized cells that communicate information about an organism's surroundings and itself[Wikipedia]." [ISBN:0-14-051288-8, ISBN:3110148986, NLM:nervous+system, WB:rynl, Wikipedia:Nervous_system, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "nerve net" NARROW [Wikipedia:Nerve_net "Nerve nets consist of interconnected neurons lacking a brain or any form of cephalization."]
synonym: "Nervous system" EXACT []
xref: AAO:0000324 ! nervous_system
xref: BILA:0000079
xref: EFO:0000802 ! nervous system
xref: EHDAA:826 ! nervous system
xref: FBbt:00005093 ! nervous system
xref: FMA:7157 ! Nervous system
xref: GAID:466 ! nervous system
xref: HOG:0000402 ! nervous system
xref: MA:0000016 ! nervous system
xref: MAT:0000026 ! nervous system
xref: MIAA:0000026 ! nervous system
xref: NIF_GrossAnatomy:birnlex_844 ! Nervous system
xref: OpenCyc:Mx4rvViT_pwpEbGdrcN5Y29ycA
xref: TAO:0000396 ! nervous system
xref: WBbt:0005735 ! nervous system
xref: XAO:0000177 ! nervous system
xref: ZFA:0000396 ! nervous system
is_a: UBERON:0000467 ! anatomical system
disjoint_from: UBERON:0000075 ! subdivision of skeleton
disjoint_from: UBERON:0000949 ! endocrine system
disjoint_from: UBERON:0000990 ! reproductive system
disjoint_from: UBERON:0001004 ! respiratory system
disjoint_from: UBERON:0001007 ! digestive system
disjoint_from: UBERON:0001008 ! urinary system
disjoint_from: UBERON:0001009 ! circulatory system
disjoint_from: UBERON:0001032 ! sense organ system
disjoint_from: UBERON:0001033 ! gustatory system
disjoint_from: UBERON:0001434 ! skeleton
disjoint_from: UBERON:0002204 ! musculoskeletal system
disjoint_from: UBERON:0002294 ! biliary system
disjoint_from: UBERON:0002330 ! exocrine system
disjoint_from: UBERON:0002390 ! hematopoietic system
disjoint_from: UBERON:0002405 ! immune system
disjoint_from: UBERON:0002416 ! integumental system
disjoint_from: UBERON:0002423 ! hepatobiliary system
relationship: develops_from UBERON:0000924 ! ectoderm
xref: ncithesaurus:Nervous_System ! Nervous System
xref: BTO:0001484 ! nervous system

[Term]
id: UBERON:0001017
name: central nervous system
alt_id: UBERON:FBbt_00005094-FMA_55675-MA_0000167-XAO_0000215-ZFA_0000012
def: "Collective name for all the nerve centers and their connective in the insect's body. In the context of Drosophila refers to the part of the nervous system consisting of the brain and ventral ganglia. // Organ with organ cavity which consists of gray matter and white matter. Examples: There is only one neuraxis. // The part of the nervous system which consists of the brain and spinal cord, to which sensory impulses are transmitted and from which motor impulses pass out, and which supervises and coordinates the activity of the entire nervous system. // The brain and spinal cord. <a href='http://zfin.org/cgi-bin/ZFIN_jump?record=ZDB-PUB-961014-576'>Kimmel et al, 1995.</a>" [FB:gg, ISBN:3110148986, NLM:central+nervous+system, Wikipedia:Central_nervous_system, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Central nervous system" EXACT []
synonym: "CNS" RELATED []
synonym: "cns" RELATED []
synonym: "Neuraxis" EXACT []
synonym: "neuraxis" EXACT []
xref: AAO:0000090 ! central_nervous_system
xref: BILA:0000080
xref: BTO:0000227
xref: EFO:0000908 ! central nervous system
xref: EHDAA:828 ! central nervous system
xref: FBbt:00005094 ! central nervous system
xref: FMA:55675 ! Neuraxis
xref: GAID:570 ! central nervous system
xref: HOG:0000293 ! central nervous system
xref: MA:0000167 ! central nervous system
xref: MAT:0000457 ! central nervous system
xref: NIF_GrossAnatomy:birnlex_1099 ! Central nervous system
xref: TAO:0000012 ! central nervous system
xref: XAO:0000215 ! central nervous system
xref: ZFA:0000012 ! central nervous system
is_a: UBERON:0000073 ! regional part of nervous system
relationship: part_of UBERON:0001016 ! nervous system
xref: ncithesaurus:Central_Nervous_System ! Central Nervous System

[Term]
id: UBERON:0001018
name: axon tract
alt_id: UBERON:FBbt_00005100-FMA_76739
def: "A group of axons linking two or more neuropils and having a common origin, termination." [http://flybrain.uni-freiburg.de/Flybrain/html/terms/terms.html]
comment: This class was created automatically from a combination of ontologies
synonym: "Tract" EXACT []
synonym: "tract" EXACT []
xref: FBbt:00005100 ! axon tract
xref: FMA:76739 ! Tract
is_a: UBERON:0000122 ! nerve fiber bundle

[Term]
id: UBERON:0001019
name: fascicle
alt_id: UBERON:FBbt_00005101-FMA_76740
def: "A slender bundle of axons linking one neuropil to another." [http://flybrain.uni-freiburg.de/Flybrain/html/terms/terms.html, Wikipedia:Fascicle]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Fascicle" EXACT []
synonym: "Fasciculus" EXACT []
synonym: "fasciculus" EXACT []
synonym: "nerve fasciculus" EXACT [FMA:12235]
xref: FBbt:00005101 ! fascicle
xref: FMA:12235 ! Nerve fasciculus
xref: NIF_GrossAnatomy:birnlex_872 ! Fasciculus
is_a: UBERON:0000122 ! nerve fiber bundle
xref: ncithesaurus:Fascicle ! Fascicle

[Term]
id: UBERON:0001020
name: commissure
alt_id: UBERON:FBbt_00005103-FMA_76741
def: "The transverse connection between two longitudinal parts, e.g. nerves, tracheae. In the context of Drosophila refers to a broad band of axons connecting the same neuropils each side of the brain." [http://flybrain.uni-freiburg.de/Flybrain/html/terms/terms.html, ISBN:3110148986, Wikipedia:Commissure]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Commissure" EXACT []
xref: FBbt:00005103 ! commissure
xref: FMA:83906 ! Commissure of neuraxis
xref: OpenCyc:Mx4rdBrmE6gOEdudWQACs5b6Bw
is_a: UBERON:0001018 ! axon tract
xref: ncithesaurus:Commissure ! Commissure

[Term]
id: UBERON:0001021
name: nerve
alt_id: UBERON:FBbt_00005099-FMA_5914
alt_id: UBERON:FBbt_00005105-FMA_65132-MA_0000217-XAO_0003047-ZFA_0007009
def: "an enclosed, cable-like bundle of peripheral axons [wikipedia]. A portion of tissue which is a fasiculated group of axons[ZFA]." [Wikipedia:Nerve, ZFA:0007009, ZFIN:curator]
comment: TODO - nerve fiber. TODO - nerve in FMA, neural tree organ vs nerve. See also UBERON:0003714 portion of nerve tissue - ZFA refers to this?
subset: uberon_slim
synonym: "Nerve" EXACT []
synonym: "nerve fiber" RELATED []
synonym: "neural subtree" RELATED []
synonym: "neurofibrum" RELATED []
xref: BTO:0000925
xref: EHDAA:2851 ! nerve
xref: EHDAA:3776 ! nerve
xref: EHDAA:4657 ! nerve
xref: FBbt:00005105 ! nerve
xref: FMA:65132 ! Nerve
xref: FMA:61284 ! Neural tree organ
xref: GAID:758 ! nerve fiber
xref: MA:0000217 ! nerve
xref: TAO:0007009 ! nerve
xref: XAO:0003047 ! nerve
xref: ZFA:0007009 ! nerve
is_a: UBERON:0000479 ! portion of tissue
relationship: part_of UBERON:0000477 ! anatomical cluster
relationship: part_of UBERON:0001016 ! nervous system
xref: ncithesaurus:Nerve ! Nerve

[Term]
id: UBERON:0001022
name: cell body
alt_id: UBERON:FBbt_00005107-FMA_67301
def: "The cell body of a neuron. // Cell component which consists of the plasma membrane and the cytoplasm surrounding the nucleus." [http://flybrain.uni-freiburg.de/Flybrain/html/terms/terms.html, Wikipedia:Cell_body]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Cell body" EXACT []
synonym: "Cell soma" EXACT []
synonym: "cell soma" EXACT []
synonym: "soma" RELATED []
xref: FBbt:00005107 ! cell body
xref: FMA:67301 ! Cell body
is_a: UBERON:0000470 ! cell part
relationship: part_of CL:0000540 ! neuron

[Term]
id: UBERON:0001023
name: dendrite
alt_id: UBERON:FBbt_00005110-FMA_67314
def: "The region of a neuron receiving inputs from other neurons, typically a slender neurite, often branched. In insect neurons, this is often not a clear designation and often presynaptic sites co-extend with postsynaptic ones. // Cell appendage of a neuron that consists of the dendrite proper and the dendritic spines." [http://flybrain.uni-freiburg.de/Flybrain/html/terms/terms.html, Wikipedia:Dendrite]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Dendrite" EXACT []
xref: FBbt:00005110 ! dendrite
xref: FMA:67314 ! Dendrite
xref: GAID:749 ! dendrite
is_a: UBERON:0001024 ! neurite
xref: ncithesaurus:Dendrite ! Dendrite

[Term]
id: UBERON:0001024
name: neurite
alt_id: UBERON:FBbt_00005113-FMA_61814
def: "One of the processes or extensions of a neuron, axon or dendrite or cell body fiber. // Cell appendage of the neuron which includes the axon and the dendrite." [http://flybrain.uni-freiburg.de/Flybrain/html/terms/terms.html, Wikipedia:Neurite]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Neurite" EXACT []
xref: FBbt:00005113 ! neurite
xref: FMA:61814 ! Neurite
xref: GAID:751 ! neurite
is_a: UBERON:0000470 ! cell part
relationship: part_of CL:0000540 ! neuron

[Term]
id: UBERON:0001025
name: synapse
alt_id: UBERON:FBbt_00005114-FMA_67408
def: "The structural contact that is the site of transmission between neurons, identified by a presynaptic ribbon and synaptic vesicles as the input element and one or (usually) more postsynaptic elements with various specializations (membrane densities, cisternae, etc.)." [http://flybrain.uni-freiburg.de/Flybrain/html/terms/terms.html, Wikipedia:Synapse]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Synapse" EXACT []
synonym: "Synaptic junction" EXACT []
synonym: "synaptic junction" EXACT []
xref: FBbt:00005114 ! synapse
xref: FMA:67408 ! Synapse
xref: GAID:766 ! synapse
xref: GO:0045202
is_a: UBERON:0000470 ! cell part
relationship: part_of CL:0000540 ! neuron
xref: ncithesaurus:Synapse ! Synapse

[Term]
id: UBERON:0001026
name: motor nerve
alt_id: UBERON:FBbt_00005135-FMA_5867
def: "General anatomical term applied to nerves in which somatic efferent nerve fibers predominate[FMA]. A motor nerve is an efferent nerve that exclusively contains the axons of somatic and branchial motoneurons, which innervate skeletal muscles (that ensure locomotion) and branchial muscles (that motorize the face and neck)[WP]." [Wikipedia:Motor_nerve]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "efferent nerve" RELATED []
synonym: "Motor nerve" EXACT []
synonym: "Nervus motorius" EXACT []
synonym: "nervus motorius" EXACT []
xref: FBbt:00005135 ! motor nerve
xref: FMA:5867 ! Motor nerve
is_a: UBERON:0001021 ! nerve
relationship: part_of UBERON:0001017 ! central nervous system

[Term]
id: UBERON:0001027
name: sensory nerve
alt_id: UBERON:FBbt_00005136-FMA_5868
def: "General anatomical term applied to nerves in which somatic afferent nerve fibers predominate[FMA]. nerves that receive sensory stimuli made up of nerve fibers, called sensory fibers (mechanoreceptor fibers sense body movement and pressure placed against the body, and nociceptor fibers sense tissue injury)[WP]." [Wikipedia:Sensory_nerve]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "afferent nerve" RELATED []
synonym: "Nervus sensorius" EXACT []
synonym: "nervus sensorius" EXACT []
synonym: "Sensory nerve" EXACT []
xref: FBbt:00005136 ! sensory nerve
xref: FMA:5868 ! Sensory nerve
xref: OpenCyc:Mx4rv0GdXpwpEbGdrcN5Y29ycA
is_a: UBERON:0001021 ! nerve

[Term]
id: UBERON:0001029
name: neuromuscular junction
alt_id: UBERON:FBbt_00005142-FMA_61803
def: "." [Wikipedia:Neuromuscular_junction]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Myoneural junction" EXACT []
synonym: "myoneural junction" EXACT []
synonym: "Neuromuscular junction" EXACT []
xref: FBbt:00005142 ! neuromuscular junction
xref: FMA:61803 ! Neuromuscular junction
xref: GAID:809 ! neuromuscular junction
is_a: UBERON:0000477 ! anatomical cluster
relationship: part_of UBERON:0001016 ! nervous system

[Term]
id: UBERON:0001030
name: synaptic ribbon
alt_id: UBERON:FBbt_00005143-FMA_67107
comment: This class was created automatically from a combination of ontologies
synonym: "Ribbon synapse" EXACT []
synonym: "ribbon synapse" EXACT []
synonym: "Synaptic ribbon" EXACT []
xref: FBbt:00005143 ! synaptic ribbon
xref: FMA:67107 ! Ribbon synapse
is_a: UBERON:0001025 ! synapse
relationship: part_of UBERON:0001029 ! neuromuscular junction

[Term]
id: UBERON:0001031
name: neurilemma
alt_id: UBERON:FBbt_00005151-FMA_62976
def: "Neural tissue which consists of Schwann cells." [Wikipedia:Neurilemma]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Neurilemma" EXACT []
synonym: "Neurolemma" EXACT []
synonym: "neurolemma" EXACT []
synonym: "Sheath of Schwann" EXACT []
synonym: "sheath of schwann" EXACT []
xref: FBbt:00005151 ! neurilemma
xref: FMA:62976 ! Neurilemma
xref: GAID:730 ! neurilemma
is_a: UBERON:0000476 ! acellular anatomical structure
relationship: part_of UBERON:0001016 ! nervous system
xref: ncithesaurus:Sheath_of_Schwann ! Sheath of Schwann
xref: BTO:0003048 ! neurolemma

[Term]
id: UBERON:0001032
name: sense organ system
alt_id: UBERON:FBbt_00005155-FMA_78499-MA_0002442-MIAA_0000031-WBbt_0005832-ZFA_0000282
def: "Anatomical system that overlaps the nervous system and is responsible for receiving and processing sensory information." [Wikipedia:Sensory_system]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Sense organ system" EXACT []
synonym: "Sensory organ system" EXACT []
synonym: "sensory organ system" EXACT []
synonym: "sensory system" EXACT []
xref: AAO:0000555 ! sensory_system
xref: BILA:0000099
xref: EFO:0000805 ! sensory system
xref: FMA:78499 ! Sense organ system
xref: MA:0002442 ! sensory organ system
xref: MAT:0000031 ! sensory system
xref: MIAA:0000031 ! sensory system
xref: TAO:0000282 ! sensory system
xref: ZFA:0000282 ! sensory system
is_a: UBERON:0000467 ! anatomical system
disjoint_from: UBERON:0000075 ! subdivision of skeleton
disjoint_from: UBERON:0000949 ! endocrine system
disjoint_from: UBERON:0000990 ! reproductive system
disjoint_from: UBERON:0001004 ! respiratory system
disjoint_from: UBERON:0001007 ! digestive system
disjoint_from: UBERON:0001008 ! urinary system
disjoint_from: UBERON:0001009 ! circulatory system
disjoint_from: UBERON:0001016 ! nervous system
disjoint_from: UBERON:0001033 ! gustatory system
disjoint_from: UBERON:0001434 ! skeleton
disjoint_from: UBERON:0002204 ! musculoskeletal system
disjoint_from: UBERON:0002294 ! biliary system
disjoint_from: UBERON:0002330 ! exocrine system
disjoint_from: UBERON:0002390 ! hematopoietic system
disjoint_from: UBERON:0002405 ! immune system
disjoint_from: UBERON:0002416 ! integumental system
disjoint_from: UBERON:0002423 ! hepatobiliary system
relationship: overlaps UBERON:0001016 ! nervous system

[Term]
id: UBERON:0001033
name: gustatory system
alt_id: UBERON:FBbt_00005159-FMA_7194-MA_0002446-MIAA_0000275-ZFA_0001101
def: "A sensory system for the sensing of taste." [Wikipedia:Gustatory_system]
subset: uberon_slim
synonym: "gustatory organ system" EXACT []
synonym: "taste system" EXACT []
xref: BILA:0000143
xref: EFO:0000830 ! taste system
xref: FMA:7194 ! Gustatory system
xref: MA:0002446 ! gustatory system
xref: MAT:0000275 ! taste system
xref: MIAA:0000275 ! taste system
xref: TAO:0001101 ! gustatory system
xref: ZFA:0001101 ! gustatory system
is_a: UBERON:0000467 ! anatomical system
disjoint_from: UBERON:0000075 ! subdivision of skeleton
disjoint_from: UBERON:0000949 ! endocrine system
disjoint_from: UBERON:0000990 ! reproductive system
disjoint_from: UBERON:0001004 ! respiratory system
disjoint_from: UBERON:0001007 ! digestive system
disjoint_from: UBERON:0001008 ! urinary system
disjoint_from: UBERON:0001009 ! circulatory system
disjoint_from: UBERON:0001016 ! nervous system
disjoint_from: UBERON:0001032 ! sense organ system
disjoint_from: UBERON:0001434 ! skeleton
disjoint_from: UBERON:0002204 ! musculoskeletal system
disjoint_from: UBERON:0002294 ! biliary system
disjoint_from: UBERON:0002330 ! exocrine system
disjoint_from: UBERON:0002390 ! hematopoietic system
disjoint_from: UBERON:0002405 ! immune system
disjoint_from: UBERON:0002416 ! integumental system
disjoint_from: UBERON:0002423 ! hepatobiliary system

[Term]
id: UBERON:0001034
name: photoreceptor
alt_id: UBERON:FBbt_00005162-FMA_85613
def: "Can refer to a light sensitive organ, a photoreceptor cell or a photoreceptor protein. This class was made obsolete because it was ambiguous" [Wikipedia:Photoreceptor]
xref: BTO:0001060
xref: FBbt:00005162 ! photoreceptor
xref: FMA:85613 ! Photoreceptor
xref: GAID:778 ! photoreceptor
is_obsolete: true
consider: CL:0000210

[Term]
id: UBERON:0001035
name: socket
alt_id: UBERON:FBbt_00005172-FMA_7495-MA_0001499
def: "Fibrous joint in which the periodontal ligament connects a tooth to the alveolar bone of the maxilla or mandible. Examples: Dento-alveolar joint of incisor tooth." []
comment: This class was created automatically from a combination of ontologies
synonym: "Dento-alveolar joint" EXACT []
synonym: "dento-alveolar joint" EXACT []
synonym: "Dento-alveolar syndesmosis" EXACT []
synonym: "dento-alveolar syndesmosis" EXACT []
synonym: "gomphosis" EXACT []
synonym: "Peg-and-socket joint" EXACT []
synonym: "peg-and-socket joint" EXACT []
synonym: "Socket" EXACT []
xref: FMA:7495 ! Dento-alveolar joint
xref: MA:0001499 ! gomphosis
is_a: UBERON:0002209 ! fibrous joint
is_a: UBERON:0002213 ! cartilaginous joint

[Term]
id: UBERON:0001037
name: hair
alt_id: UBERON:FBbt_00005182-FMA_53667-MA_0000155-MIAA_0000160
def: "." [Wikipedia:Hair]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "coat hair" EXACT []
synonym: "Hair" EXACT []
synonym: "microchaeta" RELATED []
synonym: "setulae" RELATED []
synonym: "vibrissa" RELATED []
xref: FMA:53667 ! Hair
xref: GAID:71 ! hair
xref: HOG:0001191 ! hair
xref: MA:0000155 ! coat hair
xref: MAT:0000160 ! hair
xref: MIAA:0000160 ! hair
xref: OpenCyc:Mx4rvVjOX5wpEbGdrcN5Y29ycA-Mp88EdaAAACgycbRww
is_a: UBERON:0000061 ! anatomical structure
relationship: part_of UBERON:0002199 ! integument
xref: ncithesaurus:Hair ! Hair
xref: BTO:0001501 ! hair

[Term]
id: UBERON:0001038
name: chordotonal organ
alt_id: UBERON:FBbt_00005215-MIAA_0000209
def: "Chordotonal organs are arthropod sensory structures consisting of special sensilla called the scolopidia, which are mechano-transducers and respond mainly to stretch or flexion. In insects, they consist of bundles of internal sensilla, each of which has a cap cell, an enveloping cell and one or more sense cells. The distal end of the organ is usually attached to the cuticle of the body wall, marked by a pit, a thickened disc or a nodule of chitin, and the base of the organ is connected with the hypodermis, often by a special ligament. // An auditory and vibration detector in insects" [FB:FBrf0056378, Wikipedia:Chordotonal_organ]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "ch" RELATED []
synonym: "scolopophorous organ" RELATED []
xref: FBbt:00005215 ! chordotonal organ
xref: MAT:0000209 ! chordotonal organ
xref: MIAA:0000209 ! chordotonal organ
is_a: UBERON:0000020 ! sense organ

[Term]
id: UBERON:0001040
name: yolk sac
alt_id: UBERON:FBbt_00005376-FMA_87180
def: "Membranous sac attached to an embryo, providing early nourishment in the form of yolk in bony fishes, sharks, reptiles, birds, and primitive mammals. It functions as the developmental circulatory system of the human embryo, before internal circulation begins. In the mouse, the yolk sac is the first site of blood formation, generating primitive macrophages and erythrocytes." [Wikipedia:Yolk_sac]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Yolk sac" EXACT []
xref: EHDAA:164 ! yolk sac
xref: FMA:87180 ! Yolk sac
xref: GAID:1301 ! yolk sac
xref: HOG:0000830 ! yolk sac
is_a: UBERON:0000478 ! extraembryonic structure
xref: ncithesaurus:Yolk_Sac ! Yolk Sac
xref: BTO:0001471 ! yolk sac

[Term]
id: UBERON:0001041
name: foregut
alt_id: UBERON:FBbt_00005379-FMA_45616-MA_0001526-XAO_0000232
def: "An anterior part of the alimentary canal derived from the ectoderm." [FB:gg, Wikipedia:Foregut]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Foregut" EXACT []
xref: BILA:0000085
xref: BTO:0000507
xref: EHDAA:520 ! foregut
xref: FBbt:00005379 ! foregut
xref: FMA:45616 ! Foregut
xref: HOG:0000285 ! foregut
xref: MA:0001526 ! foregut
xref: XAO:0000232 ! foregut
is_a: UBERON:0000481 ! multi-tissue structure
relationship: part_of UBERON:0001555 ! gut
xref: ncithesaurus:Foregut ! Foregut

[Term]
id: UBERON:0001042
name: pharynx
alt_id: UBERON:FBbt_00005380-FMA_46688-MA_0000432-MIAA_0000049-WBbt_0003681-ZFA_0000056
def: "the feeding organ, a neuro-muscular pump in the head of the animal, used to ingest food, bacteria suspended in liquid, filter them out, grind them up and transport posteriorly into the instestine. // ZFA: Swollen region of the anterior foregut, posterior to the mouth and anterior to the liver; its walls form the jaws and gills. <a href='http://zfin.org/cgi-bin/ZFIN_jump?record=ZDB-PUB-961014-576'>Kimmel et al, 1995.</a>" [WB:rynl, Wikipedia:Pharynx, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "esophagus" RELATED []
synonym: "Pharynx" EXACT []
xref: BTO:0001049
xref: EFO:0000836 ! pharynx
xref: EHDAA:2947 ! pharynx
xref: FBbt:00005380 ! pharynx
xref: FMA:46688 ! Pharynx
xref: GAID:155 ! pharynx
xref: HOG:0000462 ! pharynx
xref: MA:0000432 ! pharynx
xref: MAT:0000049 ! pharynx
xref: MIAA:0000049 ! pharynx
xref: OpenCyc:Mx4rvViv7ZwpEbGdrcN5Y29ycA
xref: TAO:0000056 ! pharynx
xref: WBbt:0003681 ! pharynx
xref: ZFA:0000056 ! pharynx
is_a: UBERON:0000477 ! anatomical cluster
relationship: continuous_with UBERON:0001043 ! esophagus
relationship: part_of UBERON:0001004 ! respiratory system
xref: ncithesaurus:Pharynx ! Pharynx

[Term]
id: UBERON:0001043
name: esophagus
alt_id: UBERON:FBbt_00005381-FMA_7131-MA_0000352-MIAA_0000048-XAO_0000127-ZFA_0000204
def: "Organ with organ cavity which is continuous proximally with the pharynx and distally with the stomach. Examples: There is only one esophagus. // Tube that connects the pharynx to the stomach. At NF stage 57 it is a straight tube, round in cross section, and starting from the pharynx runs backward along the dorsal side of the abdominal cavity. Its lining consists of a columnar glandular epithelium with mucus secreting cells. It is thrown into longitudinal folds." [ISBN:0815318960, OMD:esophagus, Wikipedia:Esophagus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Esophagus" EXACT []
synonym: "Gullet" EXACT []
synonym: "gullet" EXACT []
synonym: "oesophagus" EXACT []
xref: AAO:0000145 ! esophagus
xref: BTO:0000959
xref: EFO:0000835 ! oesophagus
xref: EHDAA:2937 ! oesophagus
xref: FBbt:00005381 ! esophagus
xref: FMA:7131 ! Esophagus
xref: GAID:291 ! esophagus
xref: galen:Esophagus
xref: HOG:0000450 ! oesophagus
xref: MA:0000352 ! esophagus
xref: MAT:0000048 ! oesophagus
xref: MIAA:0000048 ! oesophagus
xref: ncithesaurus:Esophagus
xref: OpenCyc:Mx4rvVj9Q5wpEbGdrcN5Y29ycA
xref: TAO:0000204 ! esophagus
xref: XAO:0000127 ! esophagus
xref: ZFA:0000204 ! esophagus
is_a: UBERON:0000062 ! organ
relationship: part_of UBERON:0001041 ! foregut
relationship: part_of UBERON:0002224 ! thoracic cavity

[Term]
id: UBERON:0001044
name: salivary gland
alt_id: UBERON:FBbt_00005382-FMA_9597-MA_0000346-MIAA_0000079
def: "saliva-secreting exocrine glands of the oral cavity[GO]. Lobular organ the parenchyma of which consists of glandular acini which communicate the oral cavity. Examples: parotid gland, sublingual gland, lingual salivary gland[FMA]." [GO:0007431, Wikipedia:Salivary_gland]
subset: uberon_slim
synonym: "Salivary gland" EXACT []
xref: BTO:0001203
xref: EFO:0000859 ! salivary gland
xref: EHDAA:7987 ! salivary gland
xref: FBbt:00005382 ! salivary gland
xref: FMA:9597 ! Salivary gland
xref: GAID:937 ! salivary gland
xref: HOG:0000376 ! salivary gland
xref: MA:0000346 ! salivary gland
xref: MAT:0000079 ! salivary gland
xref: MIAA:0000079 ! salivary gland
xref: OpenCyc:Mx4rvVjl5ZwpEbGdrcN5Y29ycA
is_a: UBERON:0002530 ! gland
intersection_of: UBERON:0002530 ! gland
intersection_of: secretes UBERON:0001836 ! saliva
relationship: part_of UBERON:0000167 ! oral cavity
relationship: part_of UBERON:0001041 ! foregut
xref: ncithesaurus:Salivary_Gland ! Salivary Gland

[Term]
id: UBERON:0001045
name: midgut
alt_id: UBERON:FBbt_00005383-FMA_45617-MA_0001564-XAO_0000103
def: "In humans: originates from the foregut at the opening of the bile duct into the duodenum and continues through the small intestine and much of the large intestine until the transition to the hindgut about two-thirds of the way through the transverse colon. That part of the alimentary canal which lies between the gizzard and the hind intestine. In the context of Drosophila refers to the part of the alimentary canal derived from the endoderm." [FB:gg, ISBN:3110148986, Wikipedia:Midgut]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Midgut" EXACT []
xref: BILA:0000086
xref: BTO:0000863
xref: FBbt:00003138 ! adult midgut
xref: FMA:45617 ! Midgut
xref: HOG:0000290 ! midgut
xref: MA:0001564 ! midgut
xref: XAO:0000103 ! midgut
is_a: UBERON:0000481 ! multi-tissue structure
is_a: UBERON:0002075 ! viscus
relationship: part_of UBERON:0001555 ! gut
xref: ncithesaurus:Midgut ! Midgut

[Term]
id: UBERON:0001046
name: hindgut
alt_id: UBERON:FBbt_00005384-FMA_45618-MA_0001527-XAO_0000104
def: "A posterior part of the alimentary canal derived from the ectoderm." [FB:gg, Wikipedia:Hindgut]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Hindgut" EXACT []
xref: BILA:0000087
xref: BTO:0000510
xref: FBbt:00005384 ! hindgut
xref: FMA:45618 ! Hindgut
xref: HOG:0000459 ! hindgut
xref: MA:0001527 ! hindgut
xref: XAO:0000104 ! hindgut
is_a: UBERON:0000481 ! multi-tissue structure
relationship: part_of UBERON:0001555 ! gut
xref: ncithesaurus:Hindgut ! Hindgut

[Term]
id: UBERON:0001047
name: neural glomerulus
alt_id: UBERON:FBbt_00005386
def: "Roundish subunit structure of a neuropil, often ensheathed by glial lamellae. Also, unit structure of the antennal lobe." [http://flybrain.uni-freiburg.de/Flybrain/html/terms/terms.html, Wikipedia:Glomerulus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Glomerulus" EXACT []
xref: FBbt:00005386 ! glomerulus
is_a: UBERON:0001021 ! nerve
xref: ncithesaurus:Glomerulus ! Glomerulus

[Term]
id: UBERON:0001048
name: primordium
alt_id: UBERON:FBbt_00005495-FMA_86589-XAO_0003043
def: "Primordia are populations of contiguous cells that are morphologically distinct and already correspond in extent to a later organ/tissue. // An embryonic structure that is the rudiment or commencement of a part or organ." [BTO:0001886, FB:DJS, FB:FBrf0089570, FB:FBrf0178740, Wikipedia:Primordium]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "P" RELATED []
synonym: "placode" RELATED []
synonym: "Primordium" EXACT []
xref: FBbt:00005495 ! primordium
xref: FMA:86589 ! Primordium
xref: MAT:0000482 ! primordium
xref: XAO:0003043 ! primordium
is_a: UBERON:0002050 ! embryonic structure
xref: ncithesaurus:Primordium ! Primordium
xref: BTO:0001886 ! primordium

[Term]
id: UBERON:0001049
name: neural tube
alt_id: UBERON:FBbt_00005554-MIAA_0000069-ZFA_0001135
def: "." [Wikipedia:Neural_tube]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "presumptive central nervous system" RELATED []
xref: BTO:0001057
xref: EHDAA:2869 ! neural tube
xref: EHDAA:908 ! neural tube
xref: HOG:0000307 ! neural tube
xref: MAT:0000069 ! neural tube
xref: MIAA:0000069 ! neural tube
xref: TAO:0001135 ! neural tube
xref: ZFA:0001135 ! neural tube
is_a: UBERON:0002346 ! neural ectoderm
relationship: develops_from UBERON:0000483 ! epithelium
relationship: develops_from UBERON:0002346 ! neural ectoderm
xref: ncithesaurus:Neural_Tube ! Neural Tube

[Term]
id: UBERON:0001050
name: atrium
alt_id: UBERON:FBbt_00005615-FMA_85574-ZFA_0000471
def: "Anatomical chamber. Examples: right atrium of heart, atrium of middle nasal meatus, atrium of tympanic cavity, atrium of alveolus. // One of four heart chambers." []
subset: uberon_slim
synonym: "Atrium" EXACT [FMA:85574]
xref: BTO:0000903
xref: EFO:0000277 ! atrium
xref: EHDAA:1265 ! atrium
xref: FMA:85574 ! Atrium
xref: galen:Atrium
xref: MAT:0000496 ! atrium
xref: OpenCyc:Mx4rDJ89oqgPEdudWQACs5b6Bw
is_a: UBERON:0000061 ! anatomical structure

[Term]
id: UBERON:0001051
name: hypopharynx
alt_id: UBERON:FBbt_00005751-FMA_54880-MA_0001796
def: "Bottom part of the pharynx, and is the part of the throat that connects to the esophagus." [Wikipedia:Hypopharynx]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Hypopharynx" EXACT []
synonym: "Laryngeal pharynx" EXACT []
synonym: "laryngeal pharynx" EXACT []
synonym: "Laryngopharynx" EXACT []
synonym: "laryngopharynx" EXACT []
xref: FMA:54880 ! Laryngopharynx
xref: GAID:338 ! hypopharynx
xref: HOG:0000445 ! hypopharynx
xref: MA:0001796 ! hypopharynx
xref: ncithesaurus:Hypopharynx
is_a: UBERON:0000477 ! anatomical cluster
relationship: part_of UBERON:0001042 ! pharynx
xref: BTO:0001740 ! hypopharynx

[Term]
id: UBERON:0001052
name: rectum
alt_id: UBERON:FBbt_00005756-FMA_14544-MA_0000336-MIAA_0000050-WBbt_0005773-XAO_0000238
def: "Organ with organ cavity which is continuous proximally with the stomach and distally with the large intestine. Examples: There is only one small intestine. // The passage from the posterior intestine, from the rectal valve to the opening to the exterior. // The terminal region of the mid intestine is comprised of specialized enterocytes that appear to play a role in mucosal immunity. <a href='http://zfin.org/cgi-bin/ZFIN_jump?record=ZDB-PUB-050120-6'>Wallace et al, 2005.</a>" [WA:dh, Wikipedia:Rectum, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "rectal sac" RELATED []
xref: BTO:0001158
xref: EFO:0000848 ! rectum
xref: EHDAA:5836 ! rectum
xref: FBbt:00005756 ! rectum
xref: FMA:14544 ! Rectum
xref: GAID:311 ! rectum
xref: HOG:0000427 ! rectum
xref: MA:0000336 ! rectum
xref: MAT:0000050 ! rectum
xref: MIAA:0000050 ! rectum
xref: ncithesaurus:Rectum
xref: OpenCyc:Mx4rvVjaU5wpEbGdrcN5Y29ycA
xref: WBbt:0005773 ! rectum
xref: XAO:0000238 ! rectum
is_a: UBERON:0000063 ! organ segment
relationship: part_of UBERON:0002108 ! small intestine

[Term]
id: UBERON:0001053
name: neurohemal organ
alt_id: UBERON:FBbt_00005757-MIAA_0000212
comment: This class was created automatically from a combination of ontologies
synonym: "neurohaemal organ" RELATED []
xref: EFO:0000864 ! neurohemal organ
xref: FBbt:00005757 ! neurohemal organ
xref: MAT:0000212 ! neurohemal organ
xref: MIAA:0000212 ! neurohemal organ
is_a: UBERON:0000062 ! organ
relationship: part_of UBERON:0001016 ! nervous system
xref: BTO:0002106 ! neurohemal organ

[Term]
id: UBERON:0001054
name: malpighian tubule
alt_id: UBERON:FBbt_00005786-MIAA_0000123
def: "The most important structure of the insect's excretory organ, which may comprise cystiform or labyrinthine highly versatile tubules having their outlet into the inital section of the rectum." [ISBN:3110148986, Wikipedia:Malpighian_tubule]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Malpighian tubule" EXACT []
synonym: "Malpighian tubules" EXACT []
synonym: "malpighian tubules" EXACT []
xref: BTO:0000810
xref: EFO:0000243 ! Malpighian tubule
xref: FBbt:00005786 ! Malpighian tubule
xref: GAID:1228 ! malpighian tubule
xref: MAT:0000123 ! Malpighian tubules
xref: MIAA:0000123 ! Malpighian tubules
is_a: UBERON:0000481 ! multi-tissue structure
relationship: part_of UBERON:0001008 ! urinary system

[Term]
id: UBERON:0001055
name: ureter
alt_id: UBERON:FBbt_00005793-FMA_19667-FMA_9704-MA_0000378-MA_0000379-MIAA_0000120-MIAA_0000121-WBbt_0004540-WBbt_0005777-XAO_0000144-XAO_0000153
is_obsolete: true
consider: UBERON:0000056
consider: UBERON:0000057

[Term]
id: UBERON:0001056
name: corpus cardiacum
alt_id: UBERON:FBbt_00005799-MIAA_0000211
comment: This class was created automatically from a combination of ontologies
xref: BTO:0000432
xref: EFO:0000380 ! corpus cardiacum
xref: FBbt:00005799 ! corpus cardiacum
xref: MAT:0000211 ! corpus cardiacum
xref: MIAA:0000211 ! corpus cardiacum
is_a: UBERON:0000061 ! anatomical structure
relationship: part_of UBERON:0000949 ! endocrine system

[Term]
id: UBERON:0001057
name: corpus allatum
alt_id: UBERON:FBbt_00005800-MIAA_0000210
def: "A neurosecretory organ forming part of the retrocerebral complex." [http://flybrain.uni-freiburg.de/Flybrain/html/terms/terms.html]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
xref: BTO:0000291
xref: EFO:0000379 ! corpus allatum
xref: FBbt:00005800 ! corpus allatum
xref: MAT:0000210 ! corpus allatum
xref: MIAA:0000210 ! corpus allatum
is_a: UBERON:0000479 ! portion of tissue
relationship: part_of UBERON:0000949 ! endocrine system

[Term]
id: UBERON:0001058
name: mushroom body
alt_id: UBERON:FBbt_00005801-MIAA_0000336
def: "Paired neuropils, thought to be crucial to olfactory associative learning and memory. Mushroom body neuropils are divided into calyces, pedunculus, and its subsequent lobes. In Drosophila these are the alpha, beta, and gamma lobes." [http://flybrain.uni-freiburg.de/Flybrain/html/terms/terms.html, Wikipedia:Mushroom_body]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
xref: EFO:0000925 ! mushroom body
xref: FBbt:00005801 ! mushroom body
xref: GAID:1231 ! mushroom body
xref: MAT:0000336 ! mushroom body
xref: MIAA:0000336 ! mushroom body
is_a: UBERON:0000045 ! ganglion
relationship: part_of UBERON:0000955 ! brain
xref: BTO:0002675 ! mushroom body

[Term]
id: UBERON:0001059
name: pars intercerebralis
alt_id: UBERON:FBbt_00005802-MIAA_0000337
def: "A medial cleft or depression dividing the left and right protocerebrum and containing numerous large and small somata of neurosecretory and neuromodulatory neurons." [http://flybrain.uni-freiburg.de/Flybrain/html/terms/terms.html]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
xref: EFO:0000926 ! pars intercerebralis
xref: FBbt:00005802 ! pars intercerebralis
xref: MAT:0000337 ! pars intercerebralis
xref: MIAA:0000337 ! pars intercerebralis
is_a: UBERON:0000061 ! anatomical structure
relationship: part_of UBERON:0001017 ! central nervous system

[Term]
id: UBERON:0001062
name: anatomical entity
alt_id: UBERON:FBbt_root_00000000-FMA_62955
def: "Biological entity, which constitutes the structural organization of a biological organism, or is an attribute of that organization. Examples: cell, heart, head, peritoneal cavity, apex of lung, anatomical term, sagittal plane." [CARO:MAH]
comment: This class was created automatically from a combination of ontologies
xref: BILA:0000000
xref: FBbt_root:00000000 ! anatomical entity
xref: FMA:62955 ! Anatomical entity
xref: HAO:0000000 ! anatomical entity
xref: NIF_GrossAnatomy:birnlex_1002
xref: TAO:0100000 ! teleost anatomical entity
xref: ZFA:0100000 ! zebrafish anatomical entity

[Term]
id: UBERON:0001063
name: flocculus
alt_id: UBERON:Flocculus-MA_0000992
def: "." [Wikipedia:Flocculus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
xref: MA:0000992 ! flocculus
xref: NIF_GrossAnatomy:birnlex_1329 ! Flocculus
xref: NULL:Flocculus
is_a: UBERON:0000061 ! anatomical structure
relationship: part_of UBERON:0002245 ! hemisphere of cerebellum

[Term]
id: UBERON:0001064
name: pancreatic duct
alt_id: UBERON:FMA_10419-MA_0000124-ZFA_0001372
def: "." [Wikipedia:Pancreatic_duct]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Pancreatic duct" EXACT []
xref: EHDAA:9194 ! pancreatic duct
xref: FMA:10419 ! Pancreatic duct
xref: GAID:337 ! pancreatic duct
xref: HOG:0000254 ! pancreatic duct
xref: MA:0000124 ! pancreatic duct
xref: ncithesaurus:Pancreatic_Duct
xref: TAO:0001372 ! pancreatic duct
xref: ZFA:0001372 ! pancreatic duct
is_a: UBERON:0000058 ! duct
intersection_of: UBERON:0000058 ! duct
intersection_of: part_of UBERON:0001264 ! pancreas
relationship: part_of UBERON:0001264 ! pancreas
xref: BTO:0002362 ! pancreatic duct

[Term]
id: UBERON:0001065
name: parotid duct
alt_id: UBERON:FMA_10420-MA_0002697
def: "." [Wikipedia:Parotid_duct]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Duct of parotid gland" EXACT []
synonym: "duct of parotid gland" EXACT []
synonym: "Parotid duct" EXACT []
synonym: "Stenon duct" EXACT []
synonym: "stenon duct" EXACT []
synonym: "Stensen's duct" EXACT []
synonym: "stensen's duct" EXACT []
synonym: "Stensens's duct" EXACT []
synonym: "stensens's duct" EXACT []
xref: FMA:10420 ! Parotid duct
xref: MA:0002697 ! parotid duct
is_a: UBERON:0001837 ! duct of salivary gland
intersection_of: UBERON:0000058 ! duct
intersection_of: part_of UBERON:0001831 ! parotid gland
relationship: part_of UBERON:0001831 ! parotid gland
xref: ncithesaurus:Parotid_Duct ! Parotid Duct

[Term]
id: UBERON:0001066
name: intervertebral disk
alt_id: UBERON:FMA_10446-MA_0000110
def: "cartiliginous organ that lies between adjacent vertebrae in the spine. Each disc forms a cartilaginous joint to allow slight movement of the vertebrae, and acts as a ligament to hold the vertebrae together[WP]." [Wikipedia:Intervertebral_disk]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "intervertebral disc" EXACT []
synonym: "spinal disc" EXACT [Wikipedia:Spinal_disc]
xref: FMA:10446 ! Intervertebral disk
xref: GAID:105 ! intervertebral disk
xref: MA:0000110 ! intervertebral disc
xref: OpenCyc:Mx4rv11AcpwpEbGdrcN5Y29ycA
is_a: UBERON:0000062 ! organ
relationship: part_of UBERON:0001468 ! intervertebral symphysis
relationship: adjacent_to UBERON:0002412 {minCardinality="2"} ! vertebra
xref: ncithesaurus:Intervertebral_Disc ! Intervertebral Disc
xref: BTO:0003625 ! intervertebral disc

[Term]
id: UBERON:0003861
name: neural arch
def: "posterior part of a vertebra that consists of a pair of pedicles and a pair of laminae, and supports seven processes: four articular processes, two transverse processes one spinous process[WP]. ZFA: A neural arch encloses the neural canal and typically meets its partner to form a neural spine. The neural arch can be a replacement ossification of the basidorsal cartilage or can form directly in membrane bone." [Wikipedia:Vertebral_arch]
synonym: "arch of vertebra" EXACT [FMA:11946]
synonym: "vertebral arch" EXACT []
xref: FMA:11946 ! vertebral arch
xref: ZFA:0001066 ! neural arch
is_a: UBERON:0002513 ! endochondral bone
relationship: part_of UBERON:0001130 ! vertebral column
xref: BTO:0001763 ! neural arch

[Term]
id: UBERON:0001067
name: vertebral arch joint
alt_id: UBERON:FMA_10447-MA_0001513
def: "a synovial joint between the superior articular process of one vertebra and the inferior articular process of the vertebra directly above it. There are two facet joints in each spinal motion segment[WP]." [Wikipedia:Facet_joint]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Facet joint" EXACT []
synonym: "facet joint" EXACT []
synonym: "Joint of vertebral arch" EXACT []
synonym: "joint of vertebral arch" EXACT []
synonym: "Joint of vertebral articular process" EXACT []
synonym: "joint of vertebral articular process" EXACT []
synonym: "Vertebral arch joint" EXACT []
synonym: "Zygapophyseal joint" EXACT []
synonym: "zygapophyseal joint" EXACT []
synonym: "Zygapophysial joint" EXACT []
synonym: "zygapophysial joint" EXACT []
xref: FMA:10447 ! Vertebral arch joint
xref: GAID:275 ! zygapophyseal joint
xref: MA:0001513 ! joint of vertebral arch
is_a: UBERON:0002217 ! synovial joint
relationship: adjacent_to UBERON:0002412 ! vertebra
relationship: part_of UBERON:0003861
xref: ncithesaurus:Facet_Joint ! Facet Joint

[Term]
id: UBERON:0001068
name: skin of back
alt_id: UBERON:FMA_10462-MA_0000498
comment: This class was created automatically from a combination of ontologies
synonym: "Back skin" EXACT []
synonym: "back skin" EXACT []
synonym: "Skin of back" EXACT []
xref: FMA:10462 ! Skin of back
xref: MA:0000498 ! back skin
is_a: UBERON:0001085 ! skin of trunk
intersection_of: UBERON:0000014 ! zone of skin
intersection_of: part_of UBERON:0001137 ! back
relationship: part_of UBERON:0001137 ! back
xref: FMA:22985 ! Zone of skin of back

[Term]
id: UBERON:0001069
name: head of pancreas
alt_id: UBERON:FMA_10468-MA_0000122
def: "." [Wikipedia:Head_of_pancreas]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Head of pancreas" EXACT []
synonym: "pancreas head" EXACT []
synonym: "Pancreatic head" EXACT []
synonym: "pancreatic head" EXACT []
synonym: "Right extremity of pancreas" EXACT []
synonym: "right extremity of pancreas" EXACT []
xref: FMA:10468 ! Head of pancreas
xref: HOG:0000448 ! pancreas head
xref: MA:0000122 ! pancreas head
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001264 ! pancreas

[Term]
id: UBERON:0001070
name: external carotid artery
alt_id: UBERON:FMA_10635-MA_0001929-XAO_0000345-ZFA_0005022
def: "The opercular artery arises from the hyoid stump on the first aortic arch, then follows the lateral margin of the operculum (gill covering) ventrally to reconnect into the proximal part of the first aortic arch. <a href='ZFIN_jump?record=ZDB-PUB-010205-5'>Isogai et al. 2001.</a>" [Wikipedia:External_carotid_artery, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "External carotid artery" EXACT []
synonym: "opercular artery" EXACT []
synonym: "ORA" RELATED []
xref: FMA:10635 ! External carotid artery
xref: GAID:480 ! external carotid artery
xref: HOG:0000265 ! external carotid artery
xref: MA:0001929 ! external carotid artery
xref: TAO:0005022 ! opercular artery
xref: XAO:0000345 ! external carotid artery
xref: ZFA:0005022 ! opercular artery
is_a: UBERON:0001637 ! artery
xref: ncithesaurus:External_Carotid_Artery ! External Carotid Artery

[Term]
id: UBERON:0001071
name: superficial cervical artery
alt_id: UBERON:FMA_10665-MA_0002052
def: "." [Wikipedia:Superficial_cervical_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Superficial cervical artery" EXACT []
xref: FMA:10665 ! Superficial cervical artery
xref: MA:0002052 ! superficial cervical artery
is_a: UBERON:0001637 ! artery
xref: ncithesaurus:Superficial_Cervical_Artery ! Superficial Cervical Artery

[Term]
id: UBERON:0001072
name: inferior vena cava
alt_id: UBERON:FMA_10951-MA_0000480-XAO_0000388
def: "Trunk of systemic vein which is formed by the union of the right common iliac vein and the left common iliac vein and terminates in the right atrium." [Wikipedia:Inferior_vena_cava]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Inferior vena cava" EXACT []
synonym: "Posterior vena cava" EXACT []
synonym: "posterior vena cava" EXACT []
xref: FMA:10951 ! Inferior vena cava
xref: GAID:548 ! inferior vena cava
xref: galen:InferiorVenaCava
xref: HOG:0001194 ! posterior vena cava
xref: MA:0000480 ! inferior vena cava
xref: XAO:0000388 ! posterior vena cava
is_a: UBERON:0000063 ! organ segment
relationship: develops_from UBERON:0001143 ! hepatic vein
relationship: part_of UBERON:0002224 ! thoracic cavity
xref: ncithesaurus:Inferior_Vena_Cava ! Inferior Vena Cava
xref: BTO:0002682 ! inferior vena cava

[Term]
id: UBERON:0001073
name: ileocecal junction
alt_id: UBERON:FMA_11338-MA_0000332
comment: This class was created automatically from a combination of ontologies
synonym: "ileocaecal junction" EXACT []
synonym: "Ileocecal junction" EXACT []
xref: FMA:11338 ! Ileocecal junction
xref: MA:0000332 ! ileocaecal junction
is_a: UBERON:0000061 ! anatomical structure
relationship: part_of UBERON:0000160 ! intestine

[Term]
id: UBERON:0001074
name: pericardial cavity
alt_id: UBERON:FMA_11350-MA_0000053
def: "Cavity of serous sac surrounded by serous pericardium." [Wikipedia:Pericardial_cavity]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Cavity of pericardial sac" EXACT []
synonym: "cavity of pericardial sac" EXACT []
synonym: "Pericardial cavity" EXACT []
xref: FMA:11350 ! Pericardial cavity
xref: HOG:0000556 ! pericardial cavity
xref: MA:0000053 ! pericardial cavity
xref: ZFA:0001655 ! pericardial cavity
is_a: UBERON:0002323 ! body cavity
relationship: part_of UBERON:0002406 ! pericardial sac
xref: ncithesaurus:Pericardial_Cavity ! Pericardial Cavity

[Term]
id: UBERON:0001075
name: body of vertebra
alt_id: UBERON:FMA_11945-MA_0001457
def: "." [Wikipedia:Body_of_vertebra]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Body of vertebra" EXACT []
synonym: "Corpus vertebrae (vertebrale)" EXACT []
synonym: "corpus vertebrae (vertebrale)" EXACT []
synonym: "Vertebral body" EXACT []
synonym: "vertebral body" EXACT []
synonym: "vertebral centrum" EXACT []
synonym: "centrum" EXACT []
xref: FMA:11945 ! Body of vertebra
xref: MA:0001457 ! vertebral body
xref: AAO:0000697 ! centrum
xref: ZFA:0000126 ! centrum
xref: OpenCyc:Mx4rvXU4VpwpEbGdrcN5Y29ycA
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0002412 ! vertebra
xref: ncithesaurus:Vertebral_Body ! Vertebral Body

[Term]
id: UBERON:0001076
name: spinous process of vertebra
alt_id: UBERON:FMA_11948-MA_0001455
def: "." [Wikipedia:Processus_spinosus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "neural spine" RELATED []
synonym: "Processus spinosus" EXACT []
synonym: "processus spinosus" EXACT []
synonym: "Spinous process of vertebra" EXACT []
synonym: "vertebra spinous process" EXACT []
xref: FMA:11948 ! Spinous process of vertebra
xref: MA:0001455 ! vertebra spinous process
is_a: UBERON:0000063 ! organ segment
relationship: part_of UBERON:0002412 ! vertebra

[Term]
id: UBERON:0001077
name: transverse process of vertebra
alt_id: UBERON:FMA_11949-MA_0001456
def: "." [Wikipedia:Processus_transversus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Processus transversus" EXACT []
synonym: "processus transversus" EXACT []
synonym: "Transverse process of vertebra" EXACT []
synonym: "vertebra transverse process" EXACT []
xref: FMA:11949 ! Transverse process of vertebra
xref: MA:0001456 ! vertebra transverse process
is_a: UBERON:0003109 ! transverse process
intersection_of: UBERON:0003109 ! transverse process
intersection_of: part_of UBERON:0002412 ! vertebra
relationship: part_of UBERON:0002412 ! vertebra

[Term]
id: UBERON:0001078
name: pedicle of vertebra
alt_id: UBERON:FMA_11950-MA_0001458
def: "." [Wikipedia:Pedicle_of_vertebral_arch]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Pedicle of vertebra" EXACT []
synonym: "Pedicle of vertebral arch" EXACT []
synonym: "pedicle of vertebral arch" EXACT []
synonym: "Vertebral pedicle" EXACT []
synonym: "vertebral pedicle" EXACT []
xref: FMA:11950 ! Pedicle of vertebra
xref: MA:0001458 ! vertebral pedicle
xref: OpenCyc:Mx4rvYdjdJwpEbGdrcN5Y29ycA
is_a: UBERON:0000063 ! organ segment
relationship: part_of UBERON:0002412 ! vertebra

[Term]
id: UBERON:0001079
name: superior articular process of vertebra
alt_id: UBERON:FMA_11953-MA_0001452
comment: This class was created automatically from a combination of ontologies
synonym: "Cranial articular process of vertebra" EXACT []
synonym: "cranial articular process of vertebra" EXACT []
synonym: "prezygapophysis" RELATED []
synonym: "Processus articularis superior" EXACT []
synonym: "processus articularis superior" EXACT []
synonym: "Superior articular process of vertebra" EXACT []
synonym: "vertebra cranial articular process" EXACT []
xref: FMA:11953 ! Superior articular process of vertebra
xref: MA:0001452 ! vertebra cranial articular process
is_a: UBERON:0000063 ! organ segment
relationship: part_of UBERON:0002412 ! vertebra

[Term]
id: UBERON:0001080
name: inferior articular process of vertebra
alt_id: UBERON:FMA_11954-MA_0001451
comment: This class was created automatically from a combination of ontologies
synonym: "Caudal articular process of vertebra" EXACT []
synonym: "caudal articular process of vertebra" EXACT []
synonym: "Inferior articular process of vertebra" EXACT []
synonym: "postzygapophysis" RELATED []
synonym: "Processus articularis inferior" EXACT []
synonym: "processus articularis inferior" EXACT []
synonym: "vertebra caudal articular process" EXACT []
xref: FMA:11954 ! Inferior articular process of vertebra
xref: MA:0001451 ! vertebra caudal articular process
is_a: UBERON:0000063 ! organ segment
relationship: part_of UBERON:0002412 ! vertebra

[Term]
id: UBERON:0001081
name: endocardium of ventricle
alt_id: UBERON:FMA_12148-MA_0000079-ZFA_0001615
def: "Endocardium that is part of the cardiac ventricle." [ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
synonym: "Endocardium of ventricle" EXACT []
synonym: "ventricle endocardium" EXACT []
synonym: "Ventricular endocardium" EXACT []
synonym: "ventricular endocardium" EXACT []
xref: FMA:12148 ! Endocardium of ventricle
xref: HOG:0000607 ! ventricle endocardium
xref: MA:0000079 ! ventricle endocardium
xref: ZFA:0001615 ! ventricular endocardium
is_a: UBERON:0002165 ! endocardium
intersection_of: UBERON:0002165 ! endocardium
intersection_of: part_of UBERON:0002300 ! ventricle
relationship: part_of UBERON:0002082 ! cardiac ventricle

[Term]
id: UBERON:0001082
name: epicardium of ventricle
alt_id: UBERON:FMA_12150-ZFA_0005058
def: "The external layer of the ventricle bounding the ventricular myocardium. It is formed by a single layer of mesothelial cells supported by a basal lamina, and imbricated with collagen, fibroblasts, and vascular structures in the subepicardial space. <a href='ZFIN_jump?record=ZDB-PUB-010912-30'>Hu et al. 2001.</a>." [ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
synonym: "Epicardium of ventricle" EXACT []
synonym: "Ventricular epicardium" EXACT []
synonym: "ventricular epicardium" EXACT []
xref: FMA:12150 ! Epicardium of ventricle
xref: TAO:0005058 ! ventricular epicardium
xref: ZFA:0005058 ! ventricular epicardium
is_a: UBERON:0002348 ! epicardium
intersection_of: UBERON:0002348 ! epicardium
intersection_of: part_of UBERON:0002300 ! ventricle
relationship: part_of UBERON:0002082 ! cardiac ventricle

[Term]
id: UBERON:0001083
name: myocardium of ventricle
alt_id: UBERON:FMA_12151-MA_0000082-ZFA_0005061
def: "Muscular layer of the cardiac ventricle composed of a compact myocardial layer surrounding the trabecular layer <a href='ZFIN_jump?record=ZDB-PUB-010912-30'>Hu et al. 2001.</a>." [ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
synonym: "Myocardium of ventricle" EXACT []
synonym: "ventricle myocardium" EXACT []
synonym: "Ventricular myocardium" EXACT []
synonym: "ventricular myocardium" EXACT []
xref: FMA:12151 ! Myocardium of ventricle
xref: HOG:0000604 ! ventricle myocardium
xref: MA:0000082 ! ventricle myocardium
xref: TAO:0005061 ! ventricular myocardium
xref: ZFA:0005061 ! ventricular myocardium
is_a: UBERON:0002349 ! myocardium
intersection_of: UBERON:0002349 ! myocardium
intersection_of: part_of UBERON:0002300 ! ventricle
relationship: part_of UBERON:0002082 ! cardiac ventricle

[Term]
id: UBERON:0001084
name: skin of head
alt_id: UBERON:FMA_12166-MA_0000582
comment: This class was created automatically from a combination of ontologies
synonym: "Head skin" EXACT []
synonym: "head skin" EXACT []
synonym: "Skin of head" EXACT []
xref: FMA:12166 ! Skin of head
xref: MA:0000582 ! head skin
is_a: UBERON:0000014 ! zone of skin
intersection_of: UBERON:0000014 ! zone of skin
intersection_of: part_of UBERON:0000033 ! head
xref: FMA:24756 ! Zone of skin of head
xref: ncithesaurus:Head_Skin ! Head Skin

[Term]
id: UBERON:0001085
name: skin of trunk
alt_id: UBERON:FMA_12167-MA_0000517
comment: This class was created automatically from a combination of ontologies
synonym: "Skin of trunk" EXACT []
synonym: "Trunk skin" EXACT []
synonym: "trunk skin" EXACT []
xref: FMA:12167 ! Skin of trunk
xref: MA:0000517 ! trunk skin
is_a: UBERON:0000014 ! zone of skin
intersection_of: UBERON:0000014 ! zone of skin
intersection_of: part_of UBERON:0002100 ! trunk
xref: FMA:23093 ! Zone of skin of trunk

[Term]
id: UBERON:0001086
name: articular cartilage
alt_id: UBERON:FMA_12264-MA_0000487-ZFA_0001644
def: "." [Wikipedia:Articular_cartilage]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Articular cartilage" EXACT []
synonym: "Cartilago articularis" EXACT []
synonym: "cartilago articularis" EXACT []
xref: FMA:12264 ! Articular cartilage
xref: GAID:101 ! articular cartilage
xref: galen:ArticularCartilage
xref: MA:0000487 ! articular cartilage
xref: TAO:0001670 ! articular cartilage
xref: ZFA:0001644 ! articular cartilage
is_a: UBERON:0001994 ! hyaline cartilage
xref: ncithesaurus:Articular_Cartilage ! Articular Cartilage
xref: BTO:0001572 ! articular cartilage

[Term]
id: UBERON:0001087
name: pleural fluid
alt_id: UBERON:FMA_12273-MA_0002532
def: "Transudate contained in the pleural cavity." [Wikipedia:Pleural_fluid]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Pleural fluid" EXACT []
xref: FMA:12273 ! Pleural fluid
xref: MA:0002532 ! pleural fluid
xref: MAT:0000500 ! pleural fluid
is_a: UBERON:0000463 ! portion of organism substance
xref: BTO:0003080 ! pleural fluid

[Term]
id: UBERON:0001088
name: urine
alt_id: UBERON:FMA_12274-MA_0002545-MIAA_0000058
def: "Excretion in liquid state processed by the kidney." [Wikipedia:Urine]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Urine" EXACT []
xref: ENVO:00002047
xref: FMA:12274 ! Urine
xref: GAID:1189 ! urine
xref: MA:0002545 ! urine
xref: MAT:0000058 ! urine
xref: MIAA:0000058 ! urine
xref: OpenCyc:Mx4rvVjGppwpEbGdrcN5Y29ycA
is_a: UBERON:0000463 ! portion of organism substance
xref: ncithesaurus:Urine ! Urine
xref: BTO:0001419 ! urine

[Term]
id: UBERON:0001089
name: sweat
alt_id: UBERON:FMA_12275-MA_0002539
def: "Secretion produced by a sweat gland." [Wikipedia:Sweat]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Sweat" EXACT []
xref: BTO:0001254
xref: ENVO:02000025
xref: FMA:12275 ! Sweat
xref: GAID:1172 ! sweat
xref: MA:0002539 ! sweat
xref: OpenCyc:Mx4rvVjJtZwpEbGdrcN5Y29ycA
is_a: UBERON:0000463 ! portion of organism substance
xref: ncithesaurus:Sweat ! Sweat

[Term]
id: UBERON:0001090
name: synovial fluid
alt_id: UBERON:FMA_12277-MA_0002544
def: "Transudate contained in the synovial cavity of joints, and in the cavity of tendon sheaths and bursae." [Wikipedia:Synovial_fluid]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Joint fluid" EXACT []
synonym: "joint fluid" EXACT []
synonym: "Synovial fluid" EXACT []
xref: ENVO:02000039
xref: FMA:12277 ! Synovial fluid
xref: GAID:265 ! synovial fluid
xref: MA:0002544 ! synovial fluid
is_a: UBERON:0000463 ! portion of organism substance
xref: ZFA:0005154 ! synovial fluid
xref: ncithesaurus:Synovial_Fluid ! Synovial Fluid

[Term]
id: UBERON:0001091
name: tooth
alt_id: UBERON:FMA_12516-MA_0000348-MIAA_0000041-XAO_0000431-ZFA_0000644-ZFA_0000694
def: "Organ with a cavity which consist of dentine surrounded by enamel. Examples: incisor, molar." [Wikipedia:Tooth_(animal), ZFIN:curator]
comment: TODO: split - currently this corresponds to tooth + teeth
subset: uberon_slim
synonym: "ceratobranchial 5 tooth" NARROW []
synonym: "dental plate" RELATED []
synonym: "dentition" BROAD []
synonym: "pharyngeal teeth" RELATED []
synonym: "teeth" RELATED []
synonym: "Tooth" EXACT []
xref: BTO:0000397
xref: EFO:0000839 ! tooth
xref: EHDAA:8009 ! tooth
xref: EHDAA:8045 ! tooth
xref: FMA:12516 ! Tooth
xref: GAID:1260 ! tooth
xref: HAO:0001019 ! tooth
xref: HOG:0000127 ! tooth
xref: MA:0000348 ! tooth
xref: MAT:0000041 ! tooth
xref: MIAA:0000041 ! tooth
xref: OpenCyc:Mx4rvVjUEZwpEbGdrcN5Y29ycA
xref: TAO:0000644 ! dental plate
xref: TAO:0000694 ! ceratobranchial 5 tooth
xref: XAO:0000431 ! tooth
xref: ZFA:0000644 ! dental plate
xref: ZFA:0000694 ! ceratobranchial 5 tooth
is_a: UBERON:0000481 ! multi-tissue structure
relationship: develops_from UBERON:0001048 ! primordium
relationship: has_part UBERON:0001751 ! dentine
relationship: has_part UBERON:0001752 ! enamel
xref: ncithesaurus:Tooth ! Tooth

[Term]
id: UBERON:0001092
name: atlas
alt_id: UBERON:FMA_12519-MA_0001421
def: "." [Wikipedia:Atlas_(anatomy)]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Atlas" EXACT []
synonym: "Atlas (CI)" EXACT []
synonym: "atlas (ci)" EXACT []
synonym: "C1 vertebra" EXACT []
synonym: "c1 vertebra" EXACT []
synonym: "cervical vertebra 1" EXACT []
synonym: "First cervical vertebra" EXACT []
synonym: "first cervical vertebra" EXACT []
xref: AAO:0000709 ! atlas
xref: EHDAA:10606 ! atlas
xref: FMA:12519 ! Atlas
xref: GAID:236 ! atlas
xref: MA:0001421 ! cervical vertebra 1
is_a: UBERON:0002413 ! cervical vertebra
xref: ncithesaurus:C1_Vertebra ! C1 Vertebra

[Term]
id: UBERON:0001093
name: axis
alt_id: UBERON:FMA_12520-MA_0001422-ZFA_0000092
def: "." [Wikipedia:Axis_(anatomy)]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Axis" EXACT []
synonym: "Axis (CII)" EXACT []
synonym: "axis (cii)" EXACT []
synonym: "midline" RELATED []
xref: EHDAA:10608 ! axis
xref: FMA:12520 ! Axis
xref: GAID:237 ! axis
xref: TAO:0000092 ! axis
xref: ZFA:0000092 ! axis
is_a: UBERON:0000475 ! organism subdivision
xref: ncithesaurus:Axis ! Axis

[Term]
id: UBERON:0001094
name: sacral vertebra
alt_id: UBERON:FMA_12526-XAO_0003078
def: "." [Wikipedia:Sacral_vertebra]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Sacral segment" EXACT []
synonym: "sacral segment" EXACT []
synonym: "Sacral vertebra" EXACT []
synonym: "Segment of sacrum" EXACT []
synonym: "segment of sacrum" EXACT []
xref: FMA:12526 ! Sacral vertebra
xref: MA:0000313 ! sacral vertebra
xref: OpenCyc:Mx4rv-ZsXpwpEbGdrcN5Y29ycA
xref: XAO:0003078 ! sacral vertebra
is_a: UBERON:0002412 ! vertebra
xref: ncithesaurus:Sacral_Vertebra ! Sacral Vertebra

[Term]
id: UBERON:0001095
name: coccygeal vertebra
alt_id: UBERON:FMA_12527-XAO_0003079-ZFA_0000326
def: "Vertebrae bearing a hemal arch and spine. The most posterior caudal vertebrae support the caudal fin and are referred to as preural vertebrae. " [Wikipedia:Caudal_vertebra, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Caudal vertebra" EXACT []
synonym: "caudal vertebra" EXACT []
synonym: "caudal vertebrae" RELATED []
synonym: "Coccygeal segment" EXACT []
synonym: "coccygeal segment" EXACT []
synonym: "Coccygeal vertebra" EXACT []
xref: FMA:12527 ! Coccygeal vertebra
xref: galen:CoccygealVertebra
xref: MA:0001420 ! coccygeal vertebra
xref: OpenCyc:Mx4rv9IEzZwpEbGdrcN5Y29ycA
xref: TAO:0000326 ! caudal vertebra
xref: XAO:0003079 ! caudal vertebra
xref: ZFA:0000326 ! caudal vertebra
is_a: UBERON:0002412 ! vertebra
xref: ncithesaurus:Coccygeal_Vertebra ! Coccygeal Vertebra

[Term]
id: UBERON:0001096
name: wall of esophagus
alt_id: UBERON:FMA_12611-MA_0002691
comment: This class was created automatically from a combination of ontologies
synonym: "Esophageal wall" EXACT []
synonym: "esophageal wall" EXACT []
synonym: "Esophagus wall" EXACT []
synonym: "esophagus wall" EXACT []
synonym: "Wall of esophagus" EXACT []
xref: FMA:12611 ! Wall of esophagus
xref: MA:0002691 ! esophagus wall
is_a: UBERON:0000060 ! wall
intersection_of: UBERON:0000060 ! wall
intersection_of: part_of UBERON:0001043 ! esophagus
relationship: part_of UBERON:0001043 ! esophagus

[Term]
id: UBERON:0001097
name: axillary lymph node
alt_id: UBERON:FMA_12771-MA_0000735
def: "." [Wikipedia:Axillary_lymph_node]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Axillary lymph node" EXACT []
synonym: "Axillary node" EXACT []
synonym: "axillary node" EXACT []
xref: FMA:12771 ! Axillary lymph node
xref: MA:0000735 ! axillary lymph node
is_a: UBERON:0000029 ! lymph node
relationship: part_of UBERON:0001467 ! shoulder
xref: ncithesaurus:Axillary_Lymph_Node ! Axillary Lymph Node

[Term]
id: UBERON:0001098
name: incisor tooth
alt_id: UBERON:FMA_12823-MA_0000349
def: "." [Wikipedia:Incisor_tooth]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "incisor" EXACT []
synonym: "Incisor tooth" EXACT []
xref: EHDAA:8011 ! incisor
xref: EHDAA:8047 ! incisor
xref: FMA:12823 ! Incisor tooth
xref: GAID:1263 ! incisor
xref: MA:0000349 ! incisor
is_a: UBERON:0001091 ! tooth
xref: ncithesaurus:Incisor ! Incisor
xref: BTO:0001741 ! incisor

[Term]
id: UBERON:0001099
name: subcostal vein
alt_id: UBERON:FMA_12845-MA_0002222
def: "." [Wikipedia:Subcostal_vein]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Subcostal vein" EXACT []
xref: FMA:12845 ! Subcostal vein
xref: MA:0002222 ! subcostal vein
is_a: UBERON:0001638 ! vein
xref: ncithesaurus:Subcostal_Vein ! Subcostal Vein

[Term]
id: UBERON:0001100
name: pectoralis minor
alt_id: UBERON:FMA_13109-MA_0002355
def: "." [Wikipedia:Pectoralis_minor]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Pectoralis minor" EXACT []
xref: EHDAA:8313 ! pectoralis minor
xref: FMA:13109 ! Pectoralis minor
xref: HOG:0000902 ! pectoralis minor
xref: MA:0002355 ! pectoralis minor
is_a: UBERON:0001495 ! pectoral muscle
xref: ncithesaurus:Pectoralis_Minor ! Pectoralis Minor

[Term]
id: UBERON:0001101
name: external jugular vein
alt_id: UBERON:FMA_13110-MA_0002156
def: "." [Wikipedia:External_jugular_vein]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "External jugular vein" EXACT []
synonym: "External jugular venous tree" EXACT []
synonym: "external jugular venous tree" EXACT []
xref: FMA:13110 ! External jugular vein
xref: galen:ExternalJugularVein
xref: MA:0002156 ! external jugular vein
is_a: UBERON:0001638 ! vein
xref: ncithesaurus:External_Jugular_Vein ! External Jugular Vein

[Term]
id: UBERON:0001102
name: cartilage of main bronchus
alt_id: UBERON:FMA_13117-MA_0001846
comment: This class was created automatically from a combination of ontologies
synonym: "Cartilage of main bronchus" EXACT []
synonym: "Main bronchial cartilage" EXACT []
synonym: "main bronchial cartilage" EXACT []
synonym: "main bronchus cartilage" EXACT []
xref: FMA:13117 ! Cartilage of main bronchus
xref: MA:0001846 ! main bronchus cartilage
is_a: UBERON:0001956 ! cartilage of bronchus
intersection_of: UBERON:0002418 ! cartilage
intersection_of: part_of UBERON:0002182 ! main bronchus
relationship: part_of UBERON:0002182 ! main bronchus

[Term]
id: UBERON:0001103
name: diaphragm
alt_id: UBERON:FMA_13295-MA_0001904
def: "The diaphragm is a skeletal muscle that is responsible for contraction and expansion of the lungs[GO]." [GO:0060539, Wikipedia:Diaphragm]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Diaphragm" EXACT []
synonym: "Thoracic diaphragm" EXACT []
synonym: "thoracic diaphragm" EXACT []
xref: BTO:0000341
xref: FMA:13295 ! Diaphragm
xref: GAID:158 ! diaphragm
xref: HOG:0000713 ! diaphragm
xref: MA:0001904 ! diaphragm
xref: MAT:0000502 ! diaphragm
xref: OpenCyc:Mx4rvVivz5wpEbGdrcN5Y29ycA
is_a: UBERON:0002426 ! chest muscle
relationship: part_of UBERON:0001004 ! respiratory system
xref: ncithesaurus:Diaphragm ! Diaphragm

[Term]
id: UBERON:0001104
name: anterior jugular vein
alt_id: UBERON:FMA_13318-MA_0002155
def: "." [Wikipedia:Anterior_jugular_vein]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Anterior external jugular vein" EXACT []
synonym: "anterior external jugular vein" EXACT []
synonym: "Anterior jugular vein" EXACT []
xref: FMA:13318 ! Anterior jugular vein
xref: MA:0002155 ! anterior jugular vein
is_a: UBERON:0001638 ! vein
xref: ncithesaurus:Anterior_Jugular_Vein ! Anterior Jugular Vein

[Term]
id: UBERON:0001105
name: clavicle
alt_id: UBERON:FMA_13321-MA_0001329
def: "." [Wikipedia:Clavicle]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Clavicle" EXACT []
synonym: "Collar bone" EXACT []
synonym: "collar bone" EXACT []
xref: AAO:0000761 ! clavicle
xref: FMA:13321 ! Clavicle
xref: GAID:182 ! clavicle
xref: galen:Clavicle
xref: HOG:0000849 ! clavicle
xref: MA:0001329 ! clavicle
xref: OpenCyc:Mx4rvVjijZwpEbGdrcN5Y29ycA
is_a: UBERON:0001440 ! skeleton of upper limb
relationship: part_of UBERON:0001467 ! shoulder
xref: ncithesaurus:Clavicle ! Clavicle

[Term]
id: UBERON:0001106
name: cephalic vein
alt_id: UBERON:FMA_13324-MA_0002092
def: "." [Wikipedia:Cephalic_vein]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Cephalic vein" EXACT []
synonym: "Cephalic vein of forearm" EXACT []
synonym: "cephalic vein of forearm" EXACT []
xref: FMA:13324 ! Cephalic vein
xref: galen:CephalicVein
xref: MA:0002092 ! cephalic vein
is_a: UBERON:0001638 ! vein
relationship: part_of UBERON:0001460 ! arm
xref: ncithesaurus:Cephalic_Vein ! Cephalic Vein

[Term]
id: UBERON:0001107
name: sternohyoid
alt_id: UBERON:FMA_13341-MA_0002383-ZFA_0000283
def: "." [Wikipedia:Sternohyoid]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Sternohyoid" EXACT []
xref: FMA:13341 ! Sternohyoid
xref: MA:0002383 ! sternohyoid
xref: TAO:0000283 ! sternohyoid
xref: ZFA:0000283 ! sternohyoid
is_a: UBERON:0002377 ! muscle of neck
relationship: part_of UBERON:0000477 ! anatomical cluster
relationship: part_of UBERON:0002376 ! muscle of head
relationship: part_of UBERON:0002539 ! pharyngeal arch
xref: ncithesaurus:Sternohyoid ! Sternohyoid

[Term]
id: UBERON:0001108
name: omohyoid
alt_id: UBERON:FMA_13342-MA_0002348
def: "." [Wikipedia:Omohyoid]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Omohyoid" EXACT []
xref: FMA:13342 ! Omohyoid
xref: MA:0002348 ! omohyoid
is_a: UBERON:0002377 ! muscle of neck
xref: ncithesaurus:Omohyoid ! Omohyoid

[Term]
id: UBERON:0001109
name: sternothyroid
alt_id: UBERON:FMA_13343-MA_0002386
def: "." [Wikipedia:Sternothyroid]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Sternothyroid" EXACT []
xref: FMA:13343 ! Sternothyroid
xref: MA:0002386 ! sternothyroid
is_a: UBERON:0002377 ! muscle of neck
xref: ncithesaurus:Sternothyroid ! Sternothyroid

[Term]
id: UBERON:0001110
name: thyrohyoid
alt_id: UBERON:FMA_13344-MA_0002393
def: "." [Wikipedia:Thyrohyoid]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Thyrohyoid" EXACT []
xref: FMA:13344 ! Thyrohyoid
xref: MA:0002393 ! thyrohyoid
is_a: UBERON:0002377 ! muscle of neck
xref: ncithesaurus:Thyrohyoid ! Thyrohyoid

[Term]
id: UBERON:0001111
name: intercostal muscle
alt_id: UBERON:FMA_13354-MA_0002324
def: "." [Wikipedia:Intercostal_muscle]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Intercostal muscle" EXACT []
synonym: "intercostales" EXACT []
xref: FMA:13354 ! Intercostal muscle
xref: GAID:159 ! intercostal muscle
xref: HOG:0000903 ! intercostal muscle
xref: MA:0002324 ! intercostales
is_a: UBERON:0002426 ! chest muscle
xref: ncithesaurus:Intercostal_Muscle ! Intercostal Muscle

[Term]
id: UBERON:0001112
name: latissimus dorsi
alt_id: UBERON:FMA_13357-MA_0002331
def: "." [Wikipedia:Latissimus_dorsi]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Latissimus dorsi" EXACT []
xref: EHDAA:8307 ! latissimus dorsi
xref: FMA:13357 ! Latissimus dorsi
xref: HOG:0000930 ! latissimus dorsi
xref: MA:0002331 ! latissimus dorsi
is_a: UBERON:0001482 ! muscle of shoulder

[Term]
id: UBERON:0001113
name: lobe of liver
alt_id: UBERON:FMA_13361-MA_0000360
comment: This class was created automatically from a combination of ontologies
synonym: "Hepatic lobe" EXACT []
synonym: "hepatic lobe" EXACT []
synonym: "Liver lobe" EXACT []
synonym: "liver lobe" EXACT []
synonym: "Lobe of liver" EXACT []
synonym: "Lobus hepatis" EXACT []
synonym: "lobus hepatis" EXACT []
xref: FMA:13361 ! Lobe of liver
xref: MA:0000360 ! liver lobe
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0002107 ! liver
xref: ncithesaurus:Liver_Lobe ! Liver Lobe

[Term]
id: UBERON:0001114
name: right lobe of liver
alt_id: UBERON:FMA_13362-MA_0000363
def: "." [Wikipedia:Right_lobe_of_liver]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "liver right lobe" EXACT []
synonym: "Right lobe of liver" EXACT []
xref: FMA:13362 ! Right lobe of liver
xref: HOG:0001424 ! liver right lobe
xref: MA:0000363 ! liver right lobe
is_a: UBERON:0001113 ! lobe of liver

[Term]
id: UBERON:0001115
name: left lobe of liver
alt_id: UBERON:FMA_13363-MA_0000361
def: "." [Wikipedia:Left_lobe_of_liver]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Left liver lobe" EXACT []
synonym: "left liver lobe" EXACT []
synonym: "Left lobe of liver" EXACT []
synonym: "liver left lobe" EXACT []
xref: FMA:13363 ! Left lobe of liver
xref: HOG:0001423 ! liver left lobe
xref: MA:0000361 ! liver left lobe
is_a: UBERON:0001113 ! lobe of liver
xref: ZFA:0005172 ! left liver lobe

[Term]
id: UBERON:0001116
name: quadrate lobe of liver
alt_id: UBERON:FMA_13364-MA_0000365
def: "." [Wikipedia:Quadrate_lobe_of_liver]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "liver quadrate lobe" EXACT []
synonym: "Lobus quadratus" EXACT []
synonym: "lobus quadratus" EXACT []
synonym: "Quadrate lobe of liver" EXACT []
xref: FMA:13364 ! Quadrate lobe of liver
xref: HOG:0000509 ! liver quadrate lobe
xref: MA:0000365 ! liver quadrate lobe
is_a: UBERON:0001114 ! right lobe of liver
xref: ncithesaurus:Lobus_Quadratus ! Lobus Quadratus

[Term]
id: UBERON:0001117
name: caudate lobe of liver
alt_id: UBERON:FMA_13365-MA_0000364
def: "." [Wikipedia:Caudate_lobe_of_liver]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Caudate lobe of liver" EXACT []
synonym: "Hepatovenous segment I" EXACT []
synonym: "hepatovenous segment i" EXACT []
synonym: "liver caudate lobe" EXACT []
synonym: "liver caudate process" RELATED []
synonym: "Lobus caudatus" EXACT []
synonym: "lobus caudatus" EXACT []
synonym: "Posterior hepatic segment I" EXACT []
synonym: "posterior hepatic segment i" EXACT []
synonym: "Posterior liver" EXACT []
synonym: "posterior liver" EXACT []
synonym: "Posterior part of liver" EXACT []
synonym: "posterior part of liver" EXACT []
synonym: "Segment I of liver" EXACT []
synonym: "segment i of liver" EXACT []
synonym: "Spiegelian lobe" EXACT []
synonym: "spiegelian lobe" EXACT []
synonym: "Spigel lobe" EXACT []
synonym: "spigel lobe" EXACT []
xref: FMA:13365 ! Caudate lobe of liver
xref: HOG:0000508 ! liver caudate lobe
xref: MA:0000364 ! liver caudate lobe
is_a: UBERON:0001114 ! right lobe of liver
relationship: part_of UBERON:0001113 ! lobe of liver
xref: ncithesaurus:Lobus_Caudatus ! Lobus Caudatus

[Term]
id: UBERON:0001118
name: lobe of thyroid gland
alt_id: UBERON:FMA_13367-MA_0000131
comment: This class was created automatically from a combination of ontologies
synonym: "Lobe of thyroid gland" EXACT []
synonym: "Lobus (glandula thyroidea)" EXACT []
synonym: "lobus (glandula thyroidea)" EXACT []
synonym: "Thyroid gland lobe" EXACT []
synonym: "thyroid gland lobe" EXACT []
xref: FMA:13367 ! Lobe of thyroid gland
xref: MA:0000131 ! thyroid gland lobe
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0002046 ! thyroid follicle
xref: ncithesaurus:Thyroid_Gland_Lobe ! Thyroid Gland Lobe

[Term]
id: UBERON:0001119
name: right lobe of thyroid gland
alt_id: UBERON:FMA_13368-MA_0000729
comment: This class was created automatically from a combination of ontologies
synonym: "Lobus dexter (glandula thyroidea)" EXACT []
synonym: "lobus dexter (glandula thyroidea)" EXACT []
synonym: "Right lobe of thyroid gland" EXACT []
synonym: "thyroid gland right lobe" EXACT []
xref: FMA:13368 ! Right lobe of thyroid gland
xref: MA:0000729 ! thyroid gland right lobe
is_a: UBERON:0001118 ! lobe of thyroid gland

[Term]
id: UBERON:0001120
name: left lobe of thyroid gland
alt_id: UBERON:FMA_13369-MA_0000728
comment: This class was created automatically from a combination of ontologies
synonym: "Left lobe of thyroid gland" EXACT []
synonym: "Lobus sinister (glandula thyroidea)" EXACT []
synonym: "lobus sinister (glandula thyroidea)" EXACT []
synonym: "thyroid gland left lobe" EXACT []
xref: FMA:13369 ! Left lobe of thyroid gland
xref: MA:0000728 ! thyroid gland left lobe
is_a: UBERON:0001118 ! lobe of thyroid gland

[Term]
id: UBERON:0001121
name: longus colli
alt_id: UBERON:FMA_13370-MA_0002341
def: "." [Wikipedia:Longus_colli]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Longus colli" EXACT []
xref: FMA:13370 ! Longus colli
xref: MA:0002341 ! longus colli
is_a: UBERON:0001630 ! muscle organ
relationship: part_of UBERON:0000477 ! anatomical cluster
xref: ncithesaurus:Longus_Colli ! Longus Colli

[Term]
id: UBERON:0001122
name: scalenus medius
alt_id: UBERON:FMA_13386-MA_0002370
def: "." [Wikipedia:Scalenus_medius]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Medial scalene muscle" EXACT []
synonym: "medial scalene muscle" EXACT []
synonym: "Middle scalene" EXACT []
synonym: "middle scalene" EXACT []
synonym: "Scalenus medius" EXACT []
xref: FMA:13386 ! Scalenus medius
xref: MA:0002370 ! scalenus medius
is_a: UBERON:0002377 ! muscle of neck
xref: ncithesaurus:Scalenus_Medius ! Scalenus Medius

[Term]
id: UBERON:0001123
name: scalenus posterior
alt_id: UBERON:FMA_13387-MA_0002369
def: "." [Wikipedia:Scalenus_posterior]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Posterior scalene" EXACT []
synonym: "posterior scalene" EXACT []
synonym: "Posterior scalene muscle" EXACT []
synonym: "posterior scalene muscle" EXACT []
synonym: "scalenus dorsalis" EXACT []
synonym: "Scalenus posterior" EXACT []
xref: FMA:13387 ! Scalenus posterior
xref: MA:0002369 ! scalenus dorsalis
is_a: UBERON:0002377 ! muscle of neck
xref: ncithesaurus:Scalenus_Dorsalis ! Scalenus Dorsalis

[Term]
id: UBERON:0001124
name: scapula
alt_id: UBERON:FMA_13394-MA_0001330-ZFA_0000583
def: "." [Wikipedia:Scapula]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Scapula" EXACT []
synonym: "Shoulder blade" EXACT []
synonym: "shoulder blade" EXACT []
xref: AAO:0000751 ! scapula
xref: BTO:0001218
xref: FMA:13394 ! Scapula
xref: GAID:186 ! scapula
xref: HOG:0001398 ! scapula
xref: MA:0001330 ! scapula
xref: OpenCyc:Mx4rvVji0JwpEbGdrcN5Y29ycA
xref: TAO:0000583 ! scapula
xref: ZFA:0000583 ! scapula
is_a: UBERON:0001474 ! bone
relationship: part_of UBERON:0001440 ! skeleton of upper limb
relationship: part_of UBERON:0001467 ! shoulder
xref: ncithesaurus:Scapula ! Scapula

[Term]
id: UBERON:0001125
name: serratus anterior
alt_id: UBERON:FMA_13397-MA_0002378
def: "." [Wikipedia:Serratus_anterior]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Boxer's muscle" EXACT []
synonym: "boxer's muscle" EXACT []
synonym: "Serratus anterior" EXACT []
synonym: "Serratus anterior muscle" EXACT []
synonym: "serratus anterior muscle" EXACT []
synonym: "serratus ventralis" EXACT []
xref: FMA:13397 ! Serratus anterior
xref: HOG:0000679 ! serratus anterior
xref: MA:0002378 ! serratus ventralis
xref: OpenCyc:Mx4rvWn_D5wpEbGdrcN5Y29ycA
is_a: UBERON:0001482 ! muscle of shoulder
xref: ncithesaurus:Serratus_Ventralis ! Serratus Ventralis

[Term]
id: UBERON:0001126
name: serratus posterior superior
alt_id: UBERON:FMA_13401-MA_0002377
def: "." [Wikipedia:Serratus_posterior_superior]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "serratus dorsalis cranialis" EXACT []
synonym: "Serratus posterior superior" EXACT []
synonym: "Superior serratus posterior" EXACT []
synonym: "superior serratus posterior" EXACT []
xref: FMA:13401 ! Serratus posterior superior
xref: MA:0002377 ! serratus dorsalis cranialis
is_a: UBERON:0001630 ! muscle organ
xref: ncithesaurus:Serratus_Dorsalis_Cranialis ! Serratus Dorsalis Cranialis

[Term]
id: UBERON:0001127
name: serratus posterior inferior
alt_id: UBERON:FMA_13402-MA_0002376
def: "." [Wikipedia:Serratus_posterior_inferior]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Inferior serratus posterior" EXACT []
synonym: "inferior serratus posterior" EXACT []
synonym: "serratus dorsalis caudalis" EXACT []
synonym: "Serratus posterior inferior" EXACT []
xref: FMA:13402 ! Serratus posterior inferior
xref: MA:0002376 ! serratus dorsalis caudalis
is_a: UBERON:0001630 ! muscle organ
xref: ncithesaurus:Serratus_Dorsalis_Caudalis ! Serratus Dorsalis Caudalis

[Term]
id: UBERON:0001128
name: sternocleidomastoid
alt_id: UBERON:FMA_13407-MA_0002384
def: "." [Wikipedia:Sternocleidomastoid]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Sternocleidomastoid" EXACT []
synonym: "Sternocleidomastoid muscle" EXACT []
synonym: "sternocleidomastoid muscle" EXACT []
synonym: "sternomastoid" EXACT []
xref: FMA:13407 ! Sternocleidomastoid
xref: MA:0002384 ! sternomastoid
xref: OpenCyc:Mx4rv2bMg5wpEbGdrcN5Y29ycA
is_a: UBERON:0002377 ! muscle of neck
xref: ncithesaurus:Sternocleidomastoid_Muscle ! Sternocleidomastoid Muscle

[Term]
id: UBERON:0001129
name: subscapularis
alt_id: UBERON:FMA_13413-MA_0002388
def: "." [Wikipedia:Subscapularis]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Subscapularis" EXACT []
synonym: "Subscapularis muscle" EXACT []
synonym: "subscapularis muscle" EXACT []
xref: EHDAA:8317 ! subscapularis
xref: FMA:13413 ! Subscapularis
xref: HOG:0000850 ! subscapularis
xref: MA:0002388 ! subscapularis
is_a: UBERON:0001482 ! muscle of shoulder
xref: ncithesaurus:Subscapularis ! Subscapularis

[Term]
id: UBERON:0001130
name: vertebral column
alt_id: UBERON:FMA_13478-MA_0002416-XAO_0003074-ZFA_0001559
def: "." [Wikipedia:Vertebral_column]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Backbone" EXACT []
synonym: "backbone" EXACT []
synonym: "Spinal column" EXACT []
synonym: "spinal column" EXACT []
synonym: "Spine" EXACT []
synonym: "spine" EXACT []
synonym: "Vertebral column" EXACT []
xref: AAO:0000734 ! vertebral_column
xref: BTO:0000818
xref: EHDA:10119 ! spinal
xref: EMAPA:16666 ! spinal
xref: FMA:13478 ! Vertebral column
xref: GAID:106 ! spine
xref: HOG:0001142 ! vertebral column
xref: MA:0002416 ! vertebral column
xref: OpenCyc:Mx4rv6GF55wpEbGdrcN5Y29ycA
xref: TAO:0001559 ! vertebral column
xref: XAO:0003074 ! vertebral column
xref: ZFA:0001559 ! vertebral column
is_a: UBERON:0000075 ! subdivision of skeleton
relationship: part_of UBERON:0001137 ! back
relationship: part_of UBERON:0002090 ! axial skeleton
xref: ncithesaurus:Vertebral_Column ! Vertebral Column

[Term]
id: UBERON:0001131
name: vertebral foramen
alt_id: UBERON:FMA_13479-MA_0001454
def: "." [Wikipedia:Vertebral_foramen]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "vertebra neural canal" EXACT []
synonym: "Vertebral foramen" EXACT []
xref: FMA:13479 ! Vertebral foramen
xref: MA:0001454 ! vertebra neural canal
xref: OpenCyc:Mx4rv_EvQZwpEbGdrcN5Y29ycA
is_a: UBERON:0000464 ! anatomical space
relationship: part_of UBERON:0002412 ! vertebra

[Term]
id: UBERON:0001132
name: parathyroid gland
alt_id: UBERON:FMA_13890-MA_0000128-MIAA_0000082-XAO_0000167
def: "The parathyroid gland is an organ specialised for secretion of parathyroid hormone[GO]." [Wikipedia:Parathyroid_gland]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "inferior parathyroid" BROAD []
synonym: "parathyroid" EXACT []
synonym: "Parathyroid gland" EXACT []
synonym: "parathyroid secreting cell" RELATED []
synonym: "superior parrathyroid" BROAD []
xref: BTO:0000997
xref: EFO:0000862 ! parathyroid
xref: FMA:13890 ! Parathyroid gland
xref: GAID:452 ! parathyroid gland
xref: HOG:0001188 ! parathyroid gland
xref: MA:0000128 ! parathyroid gland
xref: MAT:0000082 ! parathyroid
xref: MIAA:0000082 ! parathyroid
xref: XAO:0000167 ! parathyroid
is_a: UBERON:0002530 ! gland
relationship: part_of UBERON:0000949 ! endocrine system
xref: ncithesaurus:Parathyroid_Gland ! Parathyroid Gland

[Term]
id: UBERON:0001133
name: cardiac muscle tissue
alt_id: UBERON:FMA_14068-MA_0002441
def: "involuntary striated muscle found in the walls of the heart, specifically the myocardium[Wikipedia]. Tissue which consists of cardiac myocytes surrounded by cardiac endomysium. Examples: Cardiac muscle tissue proper, conducting tissue of heart[FMA]." [FMA:14068]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "cardiac muscle" EXACT []
synonym: "Cardiac muscle tissue" EXACT []
xref: BTO:0000199
xref: FMA:14068 ! Cardiac muscle tissue
xref: galen:CardiacMuscle
xref: galen:CardiacMuscleTissue
xref: MA:0002441 ! cardiac muscle tissue
is_a: UBERON:0002036 ! striated muscle tissue
intersection_of: UBERON:0002385 ! muscle tissue
intersection_of: OBO_REL:part_of UBERON:0000948 ! heart
relationship: part_of UBERON:0002349 ! myocardium

[Term]
id: UBERON:0001134
name: skeletal muscle tissue
alt_id: UBERON:FMA_14069-MA_0002439
def: "Tissue which consists of skeletal muscle fibers surrounded by endomysium. Examples: Skeletal muscle tissue of biceps, Skeletal muscle tissue of diaphragm." [Wikipedia:Skeletal_muscle]
comment: TODO - add skeletal muscle organ? See GO:0060538 skeletal muscle organ development
subset: uberon_slim
synonym: "skeletal muscle" EXACT []
synonym: "Skeletal muscle tissue" EXACT []
xref: BTO:0001103
xref: EFO:0000888 ! skeletal muscle
xref: EHDAA:2923 ! skeletal muscle
xref: EHDAA:5035 ! skeletal muscle
xref: EHDAA:5043 ! skeletal muscle
xref: EHDAA:5978 ! skeletal muscle
xref: EHDAA:5984 ! skeletal muscle
xref: EHDAA:8277 ! skeletal muscle
xref: EHDAA:8291 ! skeletal muscle
xref: EHDAA:8326 ! skeletal muscle
xref: EHDAA:9146 ! skeletal muscle
xref: FMA:14069 ! Skeletal muscle tissue
xref: HOG:0000319 ! skeletal muscle
xref: MA:0002439 ! skeletal muscle tissue
xref: MAT:0000302 ! skeletal muscle
xref: MIAA:0000302 ! skeletal muscle
xref: OpenCyc:Mx4rv2kf-5wpEbGdrcN5Y29ycA
xref: XAO:0000174 ! skeletal muscle
is_a: UBERON:0002036 ! striated muscle tissue
relationship: develops_from UBERON:0003082 ! myotome
xref: ncithesaurus:Skeletal_Muscle_Tissue ! Skeletal Muscle Tissue

[Term]
id: UBERON:0001135
name: smooth muscle tissue
alt_id: UBERON:FMA_14070-MA_0002440
def: "Tissue which consists of smooth muscle fibers surrounded by a reticulum of collagen and elastic fibers. Examples: Arrector muscle of hair, Muscularis mucosae." [Wikipedia:Smooth_muscle_tissue]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Involuntary muscle" EXACT []
synonym: "involuntary muscle" EXACT []
synonym: "Non-striated muscle" EXACT []
synonym: "non-striated muscle" EXACT []
synonym: "smooth muscle" EXACT []
synonym: "Smooth muscle tissue" EXACT []
xref: BTO:0001260
xref: EFO:0000889 ! smooth muscle
xref: FMA:14070 ! Smooth muscle tissue
xref: HOG:0001246 ! smooth muscle
xref: MA:0002440
xref: MAT:0000303 ! smooth muscle
xref: WBbt:0005780 ! non-striated muscle
is_a: UBERON:0002385 ! muscle tissue
xref: MA:0000166 ! smooth muscle tissue
xref: ncithesaurus:Smooth_Muscle_Tissue ! Smooth Muscle Tissue

[Term]
id: UBERON:0001136
name: mesothelium
alt_id: UBERON:FMA_14074-MA_0000565
def: "Simple squamous epithelium of mesodermal origin which lines serous membranes. Examples: mesothelium of pleura, mesothelium of peritoneum. Wikipedia: The mesothelium is a membrane that forms the lining of several body cavities: the pleura (thoracal cavity), peritoneum (abdominal cavity including the mesentery) and pericardium (heart sac). Mesothelial tissue also surrounds the male internal reproductive organs (the tunica vaginalis testis) and covers the internal reproductive organs of women (the tunica serosa uteri). Mesothelium that covers the internal organs is called visceral mesothelium, while the layer that covers the body walls is called the parietal mesothelium." [http://en.wikipedia.org/wiki/Mesothelium, Wikipedia:Mesothelium]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Meso-epithelium" EXACT []
synonym: "meso-epithelium" EXACT []
synonym: "Mesothelium" EXACT []
xref: EHDAA:2331 ! mesothelium
xref: EHDAA:2339 ! mesothelium
xref: EHDAA:2349 ! mesothelium
xref: EHDAA:295 ! mesothelium
xref: EHDAA:6073 ! mesothelium
xref: EHDAA:640 ! mesothelium
xref: EHDAA:646 ! mesothelium
xref: FMA:14074 ! Mesothelium
xref: MA:0000565 ! mesothelium
is_a: UBERON:0000487 ! simple squamous epithelium
relationship: develops_from UBERON:0000926 ! mesoderm
xref: ncithesaurus:Mesothelium ! Mesothelium
xref: BTO:0002422 ! mesothelium

[Term]
id: UBERON:0001137
name: back
alt_id: UBERON:FMA_14181-MA_0000020
def: "." [Wikipedia:Back]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Back" EXACT []
xref: FMA:14181 ! Back
xref: GAID:30 ! back
xref: galen:Back
xref: MA:0000020 ! back of trunk
xref: OpenCyc:Mx4rvVkEU5wpEbGdrcN5Y29ycA
is_a: UBERON:0000477 ! anatomical cluster
relationship: part_of UBERON:0002100 ! trunk
xref: ncithesaurus:Back ! Back

[Term]
id: UBERON:0001138
name: superior mesenteric vein
alt_id: UBERON:FMA_14332-MA_0002179
def: "." [Wikipedia:Superior_mesenteric_vein]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Superior mesenteric vein" EXACT []
xref: EHDAA:5414 ! superior mesenteric vein
xref: FMA:14332 ! Superior mesenteric vein
xref: HOG:0000552 ! superior mesenteric vein
xref: MA:0002179 ! superior mesenteric vein
is_a: UBERON:0002017 ! portal vein
xref: ncithesaurus:Superior_Mesenteric_Vein ! Superior Mesenteric Vein
xref: BTO:0002783 ! superior mesenteric vein

[Term]
id: UBERON:0001139
name: common iliac vein
alt_id: UBERON:FMA_14333-MA_0002143
def: "." [Wikipedia:Common_iliac_vein]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Common iliac vein" EXACT []
synonym: "Common iliac venous tree" EXACT []
synonym: "common iliac venous tree" EXACT []
xref: FMA:14333 ! Common iliac vein
xref: galen:CommonIliacVein
xref: MA:0002143 ! common iliac vein
xref: OpenCyc:Mx4rv92CGZwpEbGdrcN5Y29ycA
is_a: UBERON:0001638 ! vein
xref: ncithesaurus:Common_Iliac_Vein ! Common Iliac Vein

[Term]
id: UBERON:0001140
name: renal vein
alt_id: UBERON:FMA_14334-MA_0002210
def: "." [Wikipedia:Renal_vein]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Renal vein" EXACT []
synonym: "Renal venous tree" EXACT []
synonym: "renal venous tree" EXACT []
xref: EHDAA:8722 ! renal vein
xref: FMA:14334 ! Renal vein
xref: GAID:544 ! renal vein
xref: MA:0002210 ! renal vein
xref: MA:0002591 ! kidney venous blood vessel
xref: OpenCyc:Mx4rvdUXKJwpEbGdrcN5Y29ycA
is_a: UBERON:0001638 ! vein
intersection_of: UBERON:0001638 ! vein
intersection_of: part_of UBERON:0002113 ! kidney
relationship: part_of UBERON:0002113 ! kidney
xref: ncithesaurus:Renal_Vein ! Renal Vein
xref: BTO:0002681 ! renal vein

[Term]
id: UBERON:0001141
name: right renal vein
alt_id: UBERON:FMA_14335-MA_0002212
comment: This class was created automatically from a combination of ontologies
synonym: "Right renal vein" EXACT []
xref: FMA:14335 ! Right renal vein
xref: MA:0002212 ! right renal vein
is_a: UBERON:0001140 ! renal vein
xref: ncithesaurus:Right_Renal_Vein ! Right Renal Vein

[Term]
id: UBERON:0001142
name: left renal vein
alt_id: UBERON:FMA_14336-MA_0002211
def: "." [Wikipedia:Left_renal_vein]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Left renal vein" EXACT []
xref: FMA:14336 ! Left renal vein
xref: MA:0002211 ! left renal vein
is_a: UBERON:0001140 ! renal vein
xref: ncithesaurus:Left_Renal_Vein ! Left Renal Vein

[Term]
id: UBERON:0001143
name: hepatic vein
alt_id: UBERON:FMA_14337-XAO_0000387-ZFA_0000670
def: "." [Wikipedia:Hepatic_vein]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Hepatic vein" EXACT []
synonym: "hepatic veins" RELATED []
synonym: "Vena hepatica" EXACT []
synonym: "vena hepatica" EXACT []
xref: FMA:14337 ! Hepatic vein
xref: GAID:534 ! hepatic vein
xref: galen:HepaticVein
xref: OpenCyc:Mx4rv5GivJwpEbGdrcN5Y29ycA
xref: TAO:0000670 ! hepatic vein
xref: XAO:0000387 ! hepatic vein
xref: ZFA:0000670 ! hepatic vein
is_a: UBERON:0001638 ! vein
intersection_of: UBERON:0001638 ! vein
intersection_of: part_of UBERON:0002107 ! liver
xref: ncithesaurus:Hepatic_Vein ! Hepatic Vein

[Term]
id: UBERON:0001144
name: testicular vein
alt_id: UBERON:FMA_14344-MA_0002234
def: "." [Wikipedia:Testicular_vein]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Testicular vein" EXACT []
synonym: "Testicular venous tree" EXACT []
synonym: "testicular venous tree" EXACT []
xref: FMA:14344 ! Testicular vein
xref: MA:0002234 ! testicular vein
xref: OpenCyc:Mx4rv1WIHpwpEbGdrcN5Y29ycA
is_a: UBERON:0001638 ! vein
intersection_of: UBERON:0001638 ! vein
intersection_of: part_of UBERON:0002117 ! testicle
xref: BTO:0002678 ! testicular vein

[Term]
id: UBERON:0001145
name: ovarian vein
alt_id: UBERON:FMA_14346-MA_0002186
def: "." [Wikipedia:Ovarian_vein]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Ovarian vein" EXACT []
xref: FMA:14346 ! Ovarian vein
xref: MA:0002186 ! ovarian vein
is_a: UBERON:0001638 ! vein
intersection_of: UBERON:0001638 ! vein
intersection_of: part_of UBERON:0000992 ! ovary
xref: ncithesaurus:Ovarian_Vein ! Ovarian Vein

[Term]
id: UBERON:0001146
name: suprarenal vein
alt_id: UBERON:FMA_14348-MA_0002229
def: "." [Wikipedia:Suprarenal_vein]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Suprarenal vein" EXACT []
xref: EHDAA:8731 ! suprarenal vein
xref: FMA:14348 ! Suprarenal vein
xref: MA:0002229 ! suprarenal vein
is_a: UBERON:0001638 ! vein
xref: ncithesaurus:Suprarenal_Vein ! Suprarenal Vein

[Term]
id: UBERON:0001147
name: trunk of peripheral nerve
alt_id: UBERON:FMA_14383-MA_0000229
comment: This class was created automatically from a combination of ontologies
synonym: "peripheral nerve trunk" EXACT []
synonym: "Peripheral neural trunk" EXACT []
synonym: "peripheral neural trunk" EXACT []
synonym: "Trunk of peripheral nerve" EXACT []
xref: FMA:14383 ! Trunk of peripheral nerve
xref: MA:0000229 ! peripheral nerve trunk
is_a: UBERON:0002464 ! nerve trunk

[Term]
id: UBERON:0001148
name: median nerve
alt_id: UBERON:FMA_14385-MA_0001168
def: "." [Wikipedia:Median_nerve]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Median nerve" EXACT []
xref: EHDAA:5648 ! median nerve
xref: FMA:14385 ! Median nerve
xref: GAID:843 ! median nerve
xref: MA:0001168 ! median nerve
is_a: UBERON:0002003 ! peripheral nerve
relationship: part_of UBERON:0001460 ! arm
relationship: part_of UBERON:0001814 ! brachial nerve plexus
xref: ncithesaurus:Median_Nerve ! Median Nerve

[Term]
id: UBERON:0001149
name: bare area of liver
alt_id: UBERON:FMA_14480-MA_0000359
comment: This class was created automatically from a combination of ontologies
synonym: "Area nuda (Hepar)" EXACT []
synonym: "area nuda (hepar)" EXACT []
synonym: "Area nuda hepatis" EXACT []
synonym: "area nuda hepatis" EXACT []
synonym: "Bare area of liver" EXACT []
synonym: "liver bare area" EXACT []
xref: FMA:14480 ! Bare area of liver
xref: MA:0000359 ! liver bare area
is_a: UBERON:0000061 ! anatomical structure
relationship: part_of UBERON:0001114 ! right lobe of liver

[Term]
id: UBERON:0001150
name: body of pancreas
alt_id: UBERON:FMA_14518-MA_0000121
def: "." [Wikipedia:Body_of_pancreas]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Body of pancreas" EXACT []
synonym: "pancreas body" EXACT []
synonym: "pancreas corpus" RELATED []
synonym: "Pancreatic body" EXACT []
synonym: "pancreatic body" EXACT []
xref: FMA:14518 ! Body of pancreas
xref: HOG:0000451 ! pancreas body
xref: MA:0000121 ! pancreas body
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001264 ! pancreas

[Term]
id: UBERON:0001151
name: tail of pancreas
alt_id: UBERON:FMA_14519-MA_0000123
def: "." [Wikipedia:Tail_of_pancreas]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Left extremity of pancreas" EXACT []
synonym: "left extremity of pancreas" EXACT []
synonym: "pancreas tail" EXACT []
synonym: "Pancreatic tail" EXACT []
synonym: "pancreatic tail" EXACT []
synonym: "Tail of pancreas" EXACT []
xref: FMA:14519 ! Tail of pancreas
xref: HOG:0000452 ! pancreas tail
xref: MA:0000123 ! pancreas tail
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001264 ! pancreas

[Term]
id: UBERON:0001152
name: cystic duct
alt_id: UBERON:FMA_14539-MA_0000355
def: "." [Wikipedia:Cystic_duct]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Cystic duct" EXACT []
xref: EHDAA:3045 ! cystic duct
xref: FMA:14539 ! Cystic duct
xref: GAID:290 ! cystic duct
xref: galen:CysticDuct
xref: HOG:0000213 ! cystic duct
xref: MA:0000355 ! cystic duct
xref: OpenCyc:Mx4rveBeC5wpEbGdrcN5Y29ycA
is_a: UBERON:0002394 ! bile duct
relationship: part_of UBERON:0001173 ! biliary tree
xref: ZFA:0005166 ! cystic duct
xref: ncithesaurus:Cystic_Duct ! Cystic Duct

[Term]
id: UBERON:0001153
name: cecum
alt_id: UBERON:FMA_14541-MA_0000334-MIAA_0000288
def: "Pouch, connecting the ileum with the ascending colon of the large intestine. It is separated from the ileum by the ileocecal valve, and is the beginning of the large intestine. It is also separated from the colon by the cecocolic junction." [Wikipedia:Cecum]
comment: The cecum is present in mammals and squid,[1] and two ceca are present in most birds (and some reptiles). Most herbivores have a relatively large cecum , hosting a large number of bacteria, which aid in the enzymatic breakdown of plant materials such as cellulose. Exclusive carnivores, whose diets contain little or no plant material, have a reduced cecum; often partially or wholly replaced by the vermiform appendix. It is in the large intestine which is near the small intestine.
subset: uberon_slim
synonym: "caecum" EXACT []
synonym: "Intestinum crassum caecum" EXACT []
synonym: "intestinum crassum caecum" EXACT []
xref: BTO:0000166
xref: FMA:14541 ! Cecum
xref: GAID:307 ! cecum
xref: galen:Cecum
xref: MA:0000334 ! cecum
xref: MIAA:0000288 ! caecum
xref: ncithesaurus:Cecum
is_a: UBERON:0000063 ! organ segment
relationship: part_of UBERON:0001156 ! ascending colon

[Term]
id: UBERON:0001154
name: appendix
alt_id: UBERON:FMA_14542-MA_0001540-MIAA_0000287
def: "Organ with organ cavity which is continuous proximally with the cecum and distally terminates in the tip of the appendix. Examples: There is only one appendix.[FMA]. a narrowed, thickened, lymphoid-rich caecal apex [Fisher 2000]." [Wikipedia:Vermiform_appendix]
subset: uberon_slim
synonym: "apex of cecum" RELATED []
synonym: "Appendix" EXACT []
synonym: "caecal appendix" EXACT []
synonym: "Vermiform appendix" EXACT []
synonym: "vermiform appendix" EXACT []
synonym: "vermix" EXACT []
xref: BTO:0000084
xref: EFO:0000849 ! appendix
xref: FMA:14542 ! Appendix
xref: GAID:308 ! appendix
xref: HOG:0001306 ! appendix
xref: MA:0001540 ! appendix
xref: MAT:0000287 ! appendix
xref: MIAA:0000287 ! appendix
xref: ncithesaurus:Vermiform_Appendix
xref: OpenCyc:Mx4rvVjGgJwpEbGdrcN5Y29ycA
is_a: UBERON:0000062 ! organ
relationship: part_of UBERON:0001153 ! cecum

[Term]
id: UBERON:0001155
name: colon
alt_id: UBERON:FMA_14543-FMA_7201-MA_0000333-MA_0000335-MAP_0000001-MIAA_0000046-XAO_0000131-XAO_0000243-ZFA_0000706
def: "Last portion of the digestive system in most vertebrates; it extracts water and salt from solid wastes before they are eliminated from the body[WP] In mammals, the colon consists of four sections: the ascending colon, the transverse colon, the descending colon, and the sigmoid colon[WP]. In zebrafish, the posterior intestine has short longitudinally arranged epithelial folds which are similar to the colon of higher vertebrates. <a href='http://zfin.org/cgi-bin/ZFIN_jump?record=ZDB-PUB-050120-6'>Wallace et al, 2005.</a>" [Wikipedia:Colon_(anatomy), ZFIN:curator]
comment: TODO: abstract this such that it legitemately covers all vertebrates
subset: uberon_slim
synonym: "Colon" EXACT []
synonym: "hindgut" RELATED []
synonym: "Large bowel" EXACT []
synonym: "large bowel" EXACT []
synonym: "posterior intestine" NARROW []
synonym: "posterior intestine - zebrafish" BROAD []
xref: BTO:0000269
xref: EFO:0000361 ! colon
xref: FMA:14543 ! Colon
xref: GAID:309 ! colon
xref: galen:Colon
xref: HOG:0000648 ! colon
xref: MA:0000335 ! colon
xref: MAP:0000001 ! colon
xref: MAT:0000526 ! colon
xref: ncithesaurus:Colon
xref: OpenCyc:Mx4rvgLEM5wpEbGdrcN5Y29ycA
xref: TAO:0000706 ! posterior intestine
xref: XAO:0000243 ! colon
xref: ZFA:0000706 ! posterior intestine
is_a: UBERON:0000063 ! organ segment
relationship: part_of UBERON:0000059 ! large intestine

[Term]
id: UBERON:0001156
name: ascending colon
alt_id: UBERON:FMA_14545-MA_0001541-MIAA_0000311
def: "Organ part which is continuous with the cecum proximally and the transverse colon distally." [Wikipedia:Ascending_colon]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Ascending colon" EXACT []
xref: EFO:0000843 ! ascending colon
xref: FMA:14545 ! Ascending colon
xref: galen:AscendingColon
xref: MA:0001541 ! ascending colon
xref: MAT:0000311 ! ascending colon
xref: MIAA:0000311 ! ascending colon
xref: ncithesaurus:Ascending_Colon
xref: OpenCyc:Mx4rv3H0FZwpEbGdrcN5Y29ycA
is_a: UBERON:0000168 ! segment of colon
is_a: UBERON:0001155 ! colon
relationship: continuous_with UBERON:0001157 ! transverse colon

[Term]
id: UBERON:0001157
name: transverse colon
alt_id: UBERON:FMA_14546-MA_0001543-MIAA_0000312
def: "." [Wikipedia:Transverse_colon]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Transverse colon" EXACT []
xref: EFO:0000844 ! transverse colon
xref: FMA:14546 ! Transverse colon
xref: MA:0001543 ! transverse colon
xref: MAT:0000312 ! transverse colon
xref: MIAA:0000312 ! transverse colon
xref: ncithesaurus:Transverse_Colon
xref: OpenCyc:Mx4rvg7qyJwpEbGdrcN5Y29ycA
is_a: UBERON:0000168 ! segment of colon
is_a: UBERON:0001155 ! colon
relationship: continuous_with UBERON:0001158 ! descending colon

[Term]
id: UBERON:0001158
name: descending colon
alt_id: UBERON:FMA_14547-MA_0001542-MIAA_0000313
def: "." [Wikipedia:Descending_colon]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Descending colon" EXACT []
xref: EFO:0000845 ! descending colon
xref: FMA:14547 ! Descending colon
xref: galen:DescendingColon
xref: MA:0001542 ! descending colon
xref: MAT:0000313 ! descending colon
xref: MIAA:0000313 ! descending colon
xref: ncithesaurus:Descending_Colon
is_a: UBERON:0000168 ! segment of colon
is_a: UBERON:0001155 ! colon
relationship: continuous_with UBERON:0001159 ! sigmoid colon

[Term]
id: UBERON:0001159
name: sigmoid colon
alt_id: UBERON:FMA_14548-MIAA_0000314
def: "." [Wikipedia:Sigmoid_colon]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Sigmoid colon" EXACT []
xref: EFO:0000846 ! sigmoid colon
xref: FMA:14548 ! Sigmoid colon
xref: MAT:0000314 ! sigmoid colon
xref: MIAA:0000314 ! sigmoid colon
xref: ncithesaurus:Sigmoid_Colon
is_a: UBERON:0000168 ! segment of colon
relationship: continuous_with UBERON:0001052 ! rectum
relationship: part_of UBERON:0001008 ! urinary system

[Term]
id: UBERON:0001160
name: fundus of stomach
alt_id: UBERON:FMA_14559-MA_0001612
def: "The fundus is the portion of the stomach that lies above the cardiac notch[GO]." [GO:0014825, Wikipedia:Fundus_of_stomach]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Fundus gastricus (ventricularis)" EXACT []
synonym: "fundus gastricus (ventricularis)" EXACT []
synonym: "Fundus of stomach" EXACT []
synonym: "Gastric fundus" EXACT []
synonym: "gastric fundus" RELATED []
synonym: "stomach fundus" EXACT []
xref: BTO:0000502
xref: FMA:14559 ! Fundus of stomach
xref: GAID:320 ! gastric fundus
xref: galen:GastricFundus
xref: HOG:0000421 ! stomach fundus
xref: MA:0001612 ! stomach fundus
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0000945 ! stomach

[Term]
id: UBERON:0001161
name: body of stomach
alt_id: UBERON:FMA_14560-MA_0002559
def: "The body of stomach is the part of the stomach that lies between the fundus above and the pyloric antrum below; its boundaries are poorly defined[GO]." [GO:0014845, Wikipedia:Body_of_stomach]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Body of stomach" EXACT []
synonym: "Corpus gastricum (ventriculare)" EXACT []
synonym: "corpus gastricum (ventriculare)" EXACT []
synonym: "Gastric body" EXACT []
synonym: "gastric body" EXACT []
synonym: "Gastric corpus" EXACT []
synonym: "gastric corpus" RELATED []
synonym: "stomach body" EXACT []
xref: BTO:0000505
xref: FMA:14560 ! Body of stomach
xref: galen:GastricCorpus
xref: MA:0002559 ! stomach body
xref: ncithesaurus:Body_of_Stomach
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0000945 ! stomach

[Term]
id: UBERON:0001162
name: cardia of stomach
alt_id: UBERON:FMA_14561-MA_0001609
comment: This class was created automatically from a combination of ontologies
synonym: "Cardia of stomach" EXACT []
synonym: "Cardial part of stomach" EXACT []
synonym: "cardial part of stomach" EXACT []
synonym: "Gastric cardia" EXACT []
synonym: "gastric cardia" EXACT []
synonym: "Pars cardiaca (gaster)" EXACT []
synonym: "pars cardiaca (gaster)" EXACT []
synonym: "stomach cardiac region" EXACT []
xref: FMA:14561 ! Cardia of stomach
xref: MA:0001609 ! stomach cardiac region
xref: ncithesaurus:Cardia
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0000945 ! stomach

[Term]
id: UBERON:0001163
name: lesser curvature of stomach
alt_id: UBERON:FMA_14572-MA_0001616
def: "." [Wikipedia:Lesser_curvature_of_stomach]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Lesser curvature of stomach" EXACT []
synonym: "stomach lesser curvature" EXACT []
xref: FMA:14572 ! Lesser curvature of stomach
xref: galen:LesserCurvatureOfStomach
xref: MA:0001616 ! stomach lesser curvature
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0000945 ! stomach

[Term]
id: UBERON:0001164
name: greater curvature of stomach
alt_id: UBERON:FMA_14574-MA_0001615
def: "." [Wikipedia:Greater_curvature_of_stomach]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Greater curvature of stomach" EXACT []
synonym: "stomach greater curvature" EXACT []
xref: FMA:14574 ! Greater curvature of stomach
xref: galen:GreaterCurvatureOfStomach
xref: MA:0001615 ! stomach greater curvature
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0000945 ! stomach

[Term]
id: UBERON:0001165
name: pyloric antrum
alt_id: UBERON:FMA_14579-MA_0001624
def: "." [Wikipedia:Pyloric_antrum]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Antrum of stomach" EXACT []
synonym: "antrum of stomach" EXACT []
synonym: "Gastric antrum" EXACT []
synonym: "gastric antrum" RELATED []
synonym: "Pyloric antrum" EXACT []
synonym: "stomach antrum" RELATED []
synonym: "stomach pyloric antrum" EXACT []
xref: FMA:14579 ! Pyloric antrum
xref: GAID:332 ! pyloric antrum
xref: MA:0001624 ! stomach pyloric antrum
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0000945 ! stomach
xref: BTO:0001732 ! gastric antrum

[Term]
id: UBERON:0001166
name: pylorus
alt_id: UBERON:FMA_14581-MA_0002560
def: "." [Wikipedia:Pylorus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Pyloric part of stomach" EXACT []
synonym: "pyloric part of stomach" EXACT []
synonym: "Pylorus" EXACT []
synonym: "stomach pyloric region" EXACT []
xref: FMA:14581 ! Pylorus
xref: GAID:333 ! pylorus
xref: MA:0002560 ! stomach pyloric region
xref: ncithesaurus:Pylorus
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0000945 ! stomach

[Term]
id: UBERON:0001167
name: wall of stomach
alt_id: UBERON:FMA_14582-MA_0002692
comment: This class was created automatically from a combination of ontologies
synonym: "Gastric wall" EXACT []
synonym: "gastric wall" EXACT []
synonym: "Stomach wall" EXACT []
synonym: "stomach wall" EXACT []
synonym: "Wall of stomach" EXACT []
xref: FMA:14582 ! Wall of stomach
xref: MA:0002692 ! stomach wall
is_a: UBERON:0000060 ! wall
intersection_of: UBERON:0000060 ! wall
intersection_of: part_of UBERON:0000945 ! stomach
relationship: part_of UBERON:0000945 ! stomach

[Term]
id: UBERON:0001168
name: wall of small intestine
alt_id: UBERON:FMA_14615-MA_0002696
comment: This class was created automatically from a combination of ontologies
synonym: "Small intestinal wall" EXACT []
synonym: "small intestinal wall" EXACT []
synonym: "small intestine wall" EXACT []
synonym: "Wall of small intestine" EXACT []
xref: FMA:14615 ! Wall of small intestine
xref: MA:0002696 ! small intestine wall
is_a: UBERON:0000060 ! wall
intersection_of: UBERON:0000060 ! wall
intersection_of: part_of UBERON:0002108 ! small intestine
relationship: part_of UBERON:0002108 ! small intestine

[Term]
id: UBERON:0001169
name: wall of large intestine
alt_id: UBERON:FMA_14619-MA_0002695
comment: This class was created automatically from a combination of ontologies
synonym: "Large intestinal wall" EXACT []
synonym: "large intestinal wall" EXACT []
synonym: "large intestine wall" EXACT []
synonym: "Wall of large intestine" EXACT []
xref: FMA:14619 ! Wall of large intestine
xref: MA:0002695 ! large intestine wall
is_a: UBERON:0000060 ! wall
intersection_of: UBERON:0000060 ! wall
intersection_of: part_of UBERON:0000059 ! large intestine
relationship: part_of UBERON:0000059 ! large intestine
relationship: part_of UBERON:0001262 ! wall of intestine

[Term]
id: UBERON:0001170
name: mesentery of small intestine
alt_id: UBERON:FMA_14643-MA_0001555
comment: This class was created automatically from a combination of ontologies
synonym: "Mesentery of small intestine" EXACT []
synonym: "Mesentery proper" EXACT []
synonym: "mesentery proper" EXACT []
synonym: "Small intestinal mesentery" EXACT []
synonym: "small intestinal mesentery" EXACT []
synonym: "small intestine mesentery" EXACT []
xref: FMA:14643 ! Mesentery of small intestine
xref: MA:0001555 ! small intestine mesentery
is_a: UBERON:0002095 ! mesentery
intersection_of: UBERON:0002095 ! mesentery
intersection_of: part_of UBERON:0002108 ! small intestine
relationship: part_of UBERON:0001178 ! visceral peritoneum

[Term]
id: UBERON:0001171
name: portal lobule
alt_id: UBERON:FMA_14653-MA_0002498
comment: This class was created automatically from a combination of ontologies
synonym: "Portal lobule" EXACT []
xref: FMA:14653 ! Portal lobule
xref: MA:0002498 ! portal lobule
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001280 ! liver parenchyma
xref: ncithesaurus:Portal_Lobule ! Portal Lobule

[Term]
id: UBERON:0001172
name: hepatic acinus
alt_id: UBERON:FMA_14654-MA_0002496
comment: This class was created automatically from a combination of ontologies
synonym: "Hepatic acinus" EXACT []
synonym: "liver acinus" EXACT []
synonym: "Portal acinus" EXACT []
synonym: "portal acinus" EXACT []
xref: FMA:14654 ! Hepatic acinus
xref: MA:0002496 ! liver acinus
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001171 ! portal lobule
xref: ncithesaurus:Liver_Acinus ! Liver Acinus

[Term]
id: UBERON:0001173
name: biliary tree
alt_id: UBERON:FMA_14665-XAO_0000455
def: "Hollow tree organ, the organ parts of which consists of the bile ducts. Examples: There is only one biliary tree." [Wikipedia:Biliary_tree]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Biliary tree" EXACT []
xref: FMA:14665 ! Biliary tree
xref: XAO:0000455 ! biliary tree
is_a: UBERON:0000062 ! organ
relationship: part_of UBERON:0002107 ! liver

[Term]
id: UBERON:0001174
name: common bile duct
alt_id: UBERON:FMA_14667-MA_0001631
def: "." [Wikipedia:Common_bile_duct]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Common bile duct" EXACT []
synonym: "Ductus choledochus (biliaris)" EXACT []
synonym: "ductus choledochus (biliaris)" EXACT []
xref: EHDAA:3981 ! common bile duct
xref: FMA:14667 ! Common bile duct
xref: GAID:282 ! common bile duct
xref: galen:CommonBileDuct
xref: HOG:0000214 ! common bile duct
xref: MA:0001631 ! common bile duct
is_a: UBERON:0002394 ! bile duct
relationship: part_of UBERON:0001173 ! biliary tree
xref: ZFA:0005165 ! common bile duct
xref: ncithesaurus:Common_Bile_Duct ! Common Bile Duct

[Term]
id: UBERON:0001175
name: common hepatic duct
alt_id: UBERON:FMA_14668-ZFA_0001100
def: "A duct that carries bile from the liver to the small intestine. <a href='http://www.umm.edu/liver/biliary.htm.</a>" [Wikipedia:Common_hepatic_duct, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Common hepatic duct" EXACT []
synonym: "Hepatic duct" EXACT []
synonym: "hepatic duct" EXACT []
xref: EHDAA:3049 ! hepatic duct
xref: FMA:14668 ! Common hepatic duct
xref: GAID:286 ! common hepatic duct
xref: galen:HepaticDuct
xref: HOG:0000219 ! hepatic duct
xref: HOG:0000220 ! common hepatic duct
xref: MA:0002660 ! common hepatic duct
xref: OpenCyc:Mx4rvWo8WJwpEbGdrcN5Y29ycA
xref: TAO:0001100 ! hepatic duct
xref: ZFA:0001100 ! hepatic duct
is_a: UBERON:0002394 ! bile duct
relationship: part_of UBERON:0002107 ! liver
xref: ncithesaurus:Common_Hepatic_Duct ! Common Hepatic Duct

[Term]
id: UBERON:0001176
name: right hepatic duct
alt_id: UBERON:FMA_14669-MA_0001639
comment: This class was created automatically from a combination of ontologies
synonym: "Right hepatic duct" EXACT []
xref: EHDAA:3992 ! right hepatic duct
xref: FMA:14669 ! Right hepatic duct
xref: HOG:0000217 ! right hepatic duct
xref: MA:0001639 ! right hepatic duct
is_a: UBERON:0002394 ! bile duct
xref: ncithesaurus:Right_Hepatic_Duct ! Right Hepatic Duct

[Term]
id: UBERON:0001177
name: left hepatic duct
alt_id: UBERON:FMA_14670-MA_0001638
comment: This class was created automatically from a combination of ontologies
synonym: "Left hepatic duct" EXACT []
xref: EHDAA:3990 ! left hepatic duct
xref: FMA:14670 ! Left hepatic duct
xref: HOG:0000218 ! left hepatic duct
xref: MA:0001638 ! left hepatic duct
is_a: UBERON:0002394 ! bile duct
xref: ncithesaurus:Left_Hepatic_Duct ! Left Hepatic Duct

[Term]
id: UBERON:0001179
name: peritoneal cavity
alt_id: UBERON:FMA_14704-MA_0000054
def: "Cavity of serous sac surrounded by the peritoneum." [Wikipedia:Peritoneal_cavity]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Peritoneal cavity" EXACT []
xref: FMA:14704 ! Peritoneal cavity
xref: GAID:24 ! peritoneal cavity
xref: HOG:0000852 ! peritoneal cavity
xref: MA:0000054 ! peritoneal cavity
is_a: UBERON:0002323 ! body cavity
xref: ncithesaurus:Peritoneal_Cavity ! Peritoneal Cavity
xref: BTO:0001782 ! peritoneal cavity
relationship: surrounded_by UBERON:0002358 ! peritoneum

[Term]
id: UBERON:0001180
name: superior recess of lesser sac
alt_id: UBERON:FMA_14708-MA_0000447
comment: This class was created automatically from a combination of ontologies
synonym: "omental bursa superior recess" EXACT []
synonym: "Recessus superior omentalis" EXACT []
synonym: "recessus superior omentalis" EXACT []
synonym: "Superior omental bursa" EXACT []
synonym: "superior omental bursa" EXACT []
synonym: "Superior recess of lesser sac" EXACT []
synonym: "Superior recess of omental bursa" EXACT []
synonym: "superior recess of omental bursa" EXACT []
xref: FMA:14708 ! Superior recess of lesser sac
xref: MA:0000447 ! omental bursa superior recess
is_a: UBERON:0002553 ! anatomical cavity
relationship: part_of UBERON:0001341 ! lesser sac

[Term]
id: UBERON:0001181
name: inferior recess of lesser sac
alt_id: UBERON:FMA_14709-MA_0000446
comment: This class was created automatically from a combination of ontologies
synonym: "Inferior omental bursa" EXACT []
synonym: "inferior omental bursa" EXACT []
synonym: "Inferior recess of lesser sac" EXACT []
synonym: "Inferior recess of omental bursa" EXACT []
synonym: "inferior recess of omental bursa" EXACT []
synonym: "omental bursa inferior recess" EXACT []
synonym: "Recessus inferior omentalis" EXACT []
synonym: "recessus inferior omentalis" EXACT []
xref: FMA:14709 ! Inferior recess of lesser sac
xref: MA:0000446 ! omental bursa inferior recess
is_a: UBERON:0002553 ! anatomical cavity
relationship: part_of UBERON:0001341 ! lesser sac

[Term]
id: UBERON:0001182
name: superior mesenteric artery
alt_id: UBERON:FMA_14749-MA_0002005
def: "." [Wikipedia:Superior_mesenteric_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Superior mesenteric arterial tree" EXACT []
synonym: "superior mesenteric arterial tree" EXACT []
synonym: "Superior mesenteric artery" EXACT []
xref: EHDAA:3358 ! superior mesenteric artery
xref: EHDAA:5313 ! superior mesenteric artery
xref: FMA:14749 ! Superior mesenteric artery
xref: GAID:502 ! superior mesenteric artery
xref: HOG:0000754 ! superior mesenteric artery
xref: MA:0002005 ! superior mesenteric artery
is_a: UBERON:0001637 ! artery
xref: ncithesaurus:Superior_Mesenteric_Artery ! Superior Mesenteric Artery
xref: BTO:0002303 ! superior mesenteric artery

[Term]
id: UBERON:0001183
name: inferior mesenteric artery
alt_id: UBERON:FMA_14750-MA_0002004
def: "." [Wikipedia:Inferior_mesenteric_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Inferior mesenteric arterial tree" EXACT []
synonym: "inferior mesenteric arterial tree" EXACT []
synonym: "Inferior mesenteric artery" EXACT []
xref: EHDAA:4345 ! inferior mesenteric artery
xref: FMA:14750 ! Inferior mesenteric artery
xref: GAID:501 ! inferior mesenteric artery
xref: galen:InferiorMesentericArtery
xref: HOG:0001116 ! inferior mesenteric artery
xref: MA:0002004 ! inferior mesenteric artery
xref: OpenCyc:Mx4rv-t-S5wpEbGdrcN5Y29ycA
is_a: UBERON:0001637 ! artery
xref: ncithesaurus:Inferior_Mesenteric_Artery ! Inferior Mesenteric Artery
xref: BTO:0002302 ! inferior mesenteric artery

[Term]
id: UBERON:0001184
name: renal artery
alt_id: UBERON:FMA_14751-MA_0002035-ZFA_0000420
def: "." [Wikipedia:Renal_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Renal arterial tree" EXACT []
synonym: "renal arterial tree" EXACT []
synonym: "renal arteries" RELATED []
synonym: "Renal artery" EXACT []
xref: BTO:0001165
xref: EHDAA:5321 ! renal artery
xref: EHDAA:8594 ! renal artery
xref: FMA:14751 ! Renal artery
xref: GAID:507 ! renal artery
xref: MA:0002035 ! renal artery
xref: OpenCyc:Mx4rveOFHpwpEbGdrcN5Y29ycA
xref: TAO:0000420 ! renal artery
xref: ZFA:0000420 ! renal artery
is_a: UBERON:0001637 ! artery
intersection_of: UBERON:0001637 ! artery
intersection_of: part_of UBERON:0002113 ! kidney
relationship: part_of UBERON:0002113 ! kidney
xref: ncithesaurus:Renal_Artery ! Renal Artery

[Term]
id: UBERON:0001185
name: right renal artery
alt_id: UBERON:FMA_14752-MA_0002037
def: "." [Wikipedia:Right_renal_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Right renal arterial tree" EXACT []
synonym: "right renal arterial tree" EXACT []
synonym: "Right renal artery" EXACT []
xref: FMA:14752 ! Right renal artery
xref: MA:0002037 ! right renal artery
xref: OpenCyc:Mx4rtW8I0KgEEdudWQACs5b6Bw
is_a: UBERON:0001184 ! renal artery
xref: ncithesaurus:Right_Renal_Artery ! Right Renal Artery

[Term]
id: UBERON:0001186
name: left renal artery
alt_id: UBERON:FMA_14753-MA_0002036
comment: This class was created automatically from a combination of ontologies
synonym: "Left renal arterial tree" EXACT []
synonym: "left renal arterial tree" EXACT []
synonym: "Left renal artery" EXACT []
xref: FMA:14753 ! Left renal artery
xref: MA:0002036 ! left renal artery
xref: OpenCyc:Mx4rtW8I0agEEdudWQACs5b6Bw
is_a: UBERON:0001184 ! renal artery
xref: ncithesaurus:Left_Renal_Artery ! Left Renal Artery

[Term]
id: UBERON:0001187
name: testicular artery
alt_id: UBERON:FMA_14758-MA_0002063
def: "." [Wikipedia:Testicular_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Testicular arterial tree" EXACT []
synonym: "testicular arterial tree" EXACT []
synonym: "Testicular artery" EXACT []
xref: FMA:14758 ! Testicular artery
xref: MA:0002063 ! testicular artery
is_a: UBERON:0001637 ! artery
intersection_of: UBERON:0001637 ! artery
intersection_of: part_of UBERON:0002117 ! testicle

[Term]
id: UBERON:0001188
name: right testicular artery
alt_id: UBERON:FMA_14759-MA_0002042
comment: This class was created automatically from a combination of ontologies
synonym: "right spermatic artery" EXACT []
synonym: "Right testicular artery" EXACT []
synonym: "Trunk of right testicular arterial tree" EXACT []
synonym: "trunk of right testicular arterial tree" EXACT []
xref: FMA:14759 ! Right testicular artery
xref: MA:0002042 ! right spermatic artery
is_a: UBERON:0001187 ! testicular artery
xref: ncithesaurus:Right_Spermatic_Artery ! Right Spermatic Artery

[Term]
id: UBERON:0001189
name: left testicular artery
alt_id: UBERON:FMA_14760-MA_0002041
comment: This class was created automatically from a combination of ontologies
synonym: "left spermatic artery" EXACT []
synonym: "Left testicular artery" EXACT []
synonym: "Trunk of left testicular arterial tree" EXACT []
synonym: "trunk of left testicular arterial tree" EXACT []
xref: FMA:14760 ! Left testicular artery
xref: MA:0002041 ! left spermatic artery
is_a: UBERON:0001187 ! testicular artery
xref: ncithesaurus:Left_Spermatic_Artery ! Left Spermatic Artery

[Term]
id: UBERON:0001190
name: ovarian artery
alt_id: UBERON:FMA_14761-MA_0002012
def: "." [Wikipedia:Ovarian_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Ovarian arterial tree" EXACT []
synonym: "ovarian arterial tree" EXACT []
synonym: "Ovarian artery" EXACT []
xref: FMA:14761 ! Ovarian artery
xref: MA:0002012 ! ovarian artery
is_a: UBERON:0001637 ! artery
intersection_of: UBERON:0001637 ! artery
intersection_of: part_of UBERON:0000992 ! ovary
xref: ncithesaurus:Ovarian_Artery ! Ovarian Artery

[Term]
id: UBERON:0001191
name: common iliac artery
alt_id: UBERON:FMA_14764-MA_0001972
def: "." [Wikipedia:Common_iliac_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Common iliac arterial tree" EXACT []
synonym: "common iliac arterial tree" EXACT []
synonym: "Common iliac artery" EXACT []
xref: FMA:14764 ! Common iliac artery
xref: MA:0001972 ! common iliac artery
is_a: UBERON:0001637 ! artery
xref: ncithesaurus:Common_Iliac_Artery ! Common Iliac Artery

[Term]
id: UBERON:0001192
name: left gastric artery
alt_id: UBERON:FMA_14768-MA_0001961
def: "." [Wikipedia:Left_gastric_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Gastric artery" EXACT []
synonym: "gastric artery" EXACT []
synonym: "Left gastric artery" EXACT []
xref: FMA:14768 ! Left gastric artery
xref: galen:LeftGastricArtery
xref: MA:0001961 ! gastric artery
is_a: UBERON:0001637 ! artery
relationship: part_of UBERON:0001640 ! celiac artery
xref: ncithesaurus:Gastric_Artery ! Gastric Artery

[Term]
id: UBERON:0001193
name: hepatic artery
alt_id: UBERON:FMA_14769-MA_0001963
def: "." [Wikipedia:Hepatic_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Hepatic artery" EXACT []
xref: FMA:14769 ! Hepatic artery
xref: GAID:496 ! hepatic artery
xref: galen:HepaticArtery
xref: MA:0001963 ! hepatic artery
xref: ZFA:0005161 ! hepatic artery
is_a: UBERON:0001637 ! artery
intersection_of: UBERON:0001637 ! artery
intersection_of: part_of UBERON:0002107 ! liver
relationship: part_of UBERON:0002107 ! liver
xref: ncithesaurus:Hepatic_Artery ! Hepatic Artery

[Term]
id: UBERON:0001194
name: splenic artery
alt_id: UBERON:FMA_14773-MA_0001991
def: "." [Wikipedia:Splenic_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Lienal artery" EXACT []
synonym: "lienal artery" EXACT []
synonym: "Splenic artery" EXACT []
xref: FMA:14773 ! Splenic artery
xref: GAID:510 ! splenic artery
xref: MA:0001991 ! lienal artery
xref: OpenCyc:Mx4rv0cb2ZwpEbGdrcN5Y29ycA
is_a: UBERON:0001637 ! artery
relationship: part_of UBERON:0001640 ! celiac artery
xref: ncithesaurus:Splenic_Artery ! Splenic Artery

[Term]
id: UBERON:0001195
name: inferior pancreaticoduodenal artery
alt_id: UBERON:FMA_14805-MA_0002014
def: "." [Wikipedia:Inferior_pancreaticoduodenal_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "inferior pancreatico-duodenal artery" EXACT []
synonym: "Inferior pancreaticoduodenal artery" EXACT []
xref: FMA:14805 ! Inferior pancreaticoduodenal artery
xref: MA:0002014 ! inferior pancreatico-duodenal artery
is_a: UBERON:0001637 ! artery
xref: ncithesaurus:Inferior_Pancreatico-duodenal_artery ! Inferior Pancreatico-Duodenal Artery

[Term]
id: UBERON:0001196
name: middle colic artery
alt_id: UBERON:FMA_14810-MA_0002007
def: "." [Wikipedia:Middle_colic_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Middle colic artery" EXACT []
xref: FMA:14810 ! Middle colic artery
xref: MA:0002007 ! middle colic artery
is_a: UBERON:0001637 ! artery
relationship: part_of UBERON:0001182 ! superior mesenteric artery
xref: ncithesaurus:Middle_Colic_Artery ! Middle Colic Artery

[Term]
id: UBERON:0001197
name: ileocolic artery
alt_id: UBERON:FMA_14815-MA_0001970
def: "." [Wikipedia:Ileocolic_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Ileocolic artery" EXACT []
xref: FMA:14815 ! Ileocolic artery
xref: galen:IleocolicArtery
xref: MA:0001970 ! ileocolic artery
is_a: UBERON:0001637 ! artery
relationship: part_of UBERON:0001182 ! superior mesenteric artery

[Term]
id: UBERON:0001198
name: superior suprarenal artery
alt_id: UBERON:FMA_14863-MA_0002057
def: "." [Wikipedia:Superior_suprarenal_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Superior adrenal branch of inferior phrenic artery" EXACT []
synonym: "superior adrenal branch of inferior phrenic artery" EXACT []
synonym: "Superior suprarenal artery" EXACT []
synonym: "Superior suprarenal branch of inferior phrenic artery" EXACT []
synonym: "superior suprarenal branch of inferior phrenic artery" EXACT []
xref: FMA:14863 ! Superior suprarenal artery
xref: MA:0002057 ! superior suprarenal artery
is_a: UBERON:0001637 ! artery
xref: ncithesaurus:Superior_Suprarenal_Artery ! Superior Suprarenal Artery

[Term]
id: UBERON:0001199
name: mucosa of stomach
alt_id: UBERON:FMA_14907-MA_0002683
def: "." [Wikipedia:Gastric_mucosa]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Gastric mucosa" EXACT []
synonym: "gastric mucosa" EXACT []
synonym: "Gastric mucous membrane" EXACT []
synonym: "gastric mucous membrane" EXACT []
synonym: "Mucosa of stomach" EXACT []
synonym: "Mucous membrane of stomach" EXACT []
synonym: "mucous membrane of stomach" EXACT []
synonym: "stomach mucosa" EXACT []
synonym: "Tunica mucosa (Gaster)" EXACT []
synonym: "tunica mucosa (gaster)" EXACT []
xref: BTO:0001308
xref: FMA:14907 ! Mucosa of stomach
xref: GAID:321 ! gastric mucosa
xref: galen:GastricMucosa
xref: MA:0002683 ! stomach mucosa
is_a: UBERON:0000064 ! organ part
intersection_of: UBERON:0000344 ! mucosa
intersection_of: OBO_REL:part_of UBERON:0000945 ! stomach
relationship: part_of UBERON:0001167 ! wall of stomach
xref: ncithesaurus:Gastric_Mucosa ! Gastric Mucosa

[Term]
id: UBERON:0001200
name: submucosa of stomach
alt_id: UBERON:FMA_14908-MA_0002685
comment: This class was created automatically from a combination of ontologies
synonym: "Gastric submucosa" EXACT []
synonym: "gastric submucosa" EXACT []
synonym: "stomach submucosa" EXACT []
synonym: "Submucosa of stomach" EXACT []
synonym: "Tela submucosa (Gaster)" EXACT []
synonym: "tela submucosa (gaster)" EXACT []
xref: FMA:14908 ! Submucosa of stomach
xref: MA:0002685 ! stomach submucosa
is_a: UBERON:0000009 ! submucosa
intersection_of: UBERON:0000009 ! submucosa
intersection_of: part_of UBERON:0000945 ! stomach
relationship: part_of UBERON:0001167 ! wall of stomach
xref: ncithesaurus:Gastric_Submucosa ! Gastric Submucosa

[Term]
id: UBERON:0001201
name: serosa of stomach
alt_id: UBERON:FMA_14914-MA_0001626
comment: TODO - check serosa/peritoneum
synonym: "Gastric serosa" EXACT []
synonym: "gastric serosa" RELATED []
synonym: "Serosa of stomach" EXACT []
synonym: "Serous coat of stomach" EXACT []
synonym: "serous coat of stomach" EXACT []
synonym: "stomach serosa" EXACT []
synonym: "Tunica serosa (Gaster)" EXACT []
synonym: "tunica serosa (gaster)" EXACT []
synonym: "Visceral peritoneum of stomach" EXACT []
synonym: "visceral peritoneum of stomach" EXACT []
xref: FMA:14914 ! Serosa of stomach
xref: MA:0001626 ! stomach serosa
is_a: UBERON:0000042 ! serous membrane
intersection_of: UBERON:0000042 ! serous membrane
intersection_of: part_of UBERON:0001167 ! wall of stomach
relationship: part_of UBERON:0001167 ! wall of stomach

[Term]
id: UBERON:0001202
name: pyloric sphincter
alt_id: UBERON:FMA_14916-XAO_0000457
def: "." [Wikipedia:Pyloric_sphincter]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Pyloric sphincter" EXACT []
xref: FMA:14916 ! Pyloric sphincter
xref: HOG:0001466 ! pyloric sphincter
xref: XAO:0000457 ! pyloric sphincter
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001166 ! pylorus
xref: ncithesaurus:Pyloric_Sphincter ! Pyloric Sphincter

[Term]
id: UBERON:0001203
name: muscularis mucosae of stomach
alt_id: UBERON:FMA_14924-MA_0002684
comment: This class was created automatically from a combination of ontologies
synonym: "Lamina muscularis mucosae (Tunica mucosa)(Gaster)" EXACT []
synonym: "lamina muscularis mucosae (tunica mucosa)(gaster)" EXACT []
synonym: "Lamina muscularis of gastric mucosa" EXACT []
synonym: "lamina muscularis of gastric mucosa" EXACT []
synonym: "Muscular coat of stomach" EXACT []
synonym: "muscular coat of stomach" EXACT []
synonym: "Muscularis mucosae of stomach" EXACT []
synonym: "stomach muscularis mucosa" EXACT []
xref: FMA:14924 ! Muscularis mucosae of stomach
xref: MA:0002684 ! stomach muscularis mucosa
is_a: UBERON:0001135 ! smooth muscle tissue
relationship: part_of UBERON:0001199 ! mucosa of stomach

[Term]
id: UBERON:0001204
name: mucosa of small intestine
alt_id: UBERON:FMA_14933-MA_0002686
comment: This class was created automatically from a combination of ontologies
synonym: "Mucosa of small intestine" EXACT []
synonym: "Mucous membrane of small intestine" EXACT []
synonym: "mucous membrane of small intestine" EXACT []
synonym: "Small intestinal mucosa" EXACT []
synonym: "small intestinal mucosa" EXACT []
synonym: "small intestine mucosa" EXACT []
synonym: "Small intestine mucous membrane" EXACT []
synonym: "small intestine mucous membrane" EXACT []
synonym: "Tunica mucosa (Intestinum tenue)" EXACT []
synonym: "tunica mucosa (intestinum tenue)" EXACT []
xref: BTO:0001259
xref: FMA:14933 ! Mucosa of small intestine
xref: MA:0002686 ! small intestine mucosa
is_a: UBERON:0001242 ! intestinal mucosa
intersection_of: UBERON:0000344 ! mucosa
intersection_of: OBO_REL:part_of UBERON:0002108 ! small intestine
relationship: part_of UBERON:0001168 ! wall of small intestine
xref: ncithesaurus:Small_Intestinal_Mucosa ! Small Intestinal Mucosa

[Term]
id: UBERON:0001205
name: submucosa of small intestine
alt_id: UBERON:FMA_14934-MA_0001562
def: "." [Wikipedia:Small_intestinal_submucosa]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Small intestinal submucosa" EXACT []
synonym: "small intestinal submucosa" EXACT []
synonym: "Small intestine submucosa" EXACT []
synonym: "small intestine submucosa" EXACT []
synonym: "Submucosa of small intestine" EXACT []
synonym: "Tela submucosa (Intestinum tenue)" EXACT []
synonym: "tela submucosa (intestinum tenue)" EXACT []
xref: FMA:14934 ! Submucosa of small intestine
xref: MA:0001562 ! small intestine submucosa
is_a: UBERON:0000009 ! submucosa
intersection_of: UBERON:0000009 ! submucosa
intersection_of: part_of UBERON:0002108 ! small intestine
relationship: part_of UBERON:0001168 ! wall of small intestine
xref: ncithesaurus:Small_Intestinal_Submucosa ! Small Intestinal Submucosa

[Term]
id: UBERON:0001206
name: serosa of small intestine
alt_id: UBERON:FMA_14938-MA_0001558
comment: TODO - check serosa/peritoneum
synonym: "Serosa of small intestine" EXACT []
synonym: "Serous coat of small intestine" EXACT []
synonym: "serous coat of small intestine" EXACT []
synonym: "Small intestinal serosa" EXACT []
synonym: "small intestinal serosa" EXACT []
synonym: "Small intestine serosa" EXACT []
synonym: "small intestine serosa" EXACT []
synonym: "Tunica serosa (Intestinum tenue)" EXACT []
synonym: "tunica serosa (intestinum tenue)" EXACT []
synonym: "Visceral peritoneum of small intestine" EXACT []
synonym: "visceral peritoneum of small intestine" EXACT []
xref: FMA:14938 ! Serosa of small intestine
xref: MA:0001558 ! small intestine serosa
is_a: UBERON:0001243 ! serosa of intestine
intersection_of: UBERON:0000042 ! serous membrane
intersection_of: part_of UBERON:0002108 ! small intestine
relationship: part_of UBERON:0001168 ! wall of small intestine

[Term]
id: UBERON:0001207
name: mucosa of large intestine
alt_id: UBERON:FMA_14969-MA_0002688
comment: This class was created automatically from a combination of ontologies
synonym: "Large intestinal mucosa" EXACT []
synonym: "large intestinal mucosa" EXACT []
synonym: "large intestine mucosa" EXACT []
synonym: "Mucosa of large intestine" EXACT []
synonym: "Mucous membrane of large intestine" EXACT []
synonym: "mucous membrane of large intestine" EXACT []
xref: FMA:14969 ! Mucosa of large intestine
xref: MA:0002688 ! large intestine mucosa
is_a: UBERON:0001242 ! intestinal mucosa
intersection_of: UBERON:0000344 ! mucosa
intersection_of: OBO_REL:part_of UBERON:0000059 ! large intestine
relationship: part_of UBERON:0001169 ! wall of large intestine
xref: ncithesaurus:Large_Intestinal_Mucosa ! Large Intestinal Mucosa

[Term]
id: UBERON:0001208
name: submucosa of large intestine
alt_id: UBERON:FMA_14970-MA_0002690
comment: This class was created automatically from a combination of ontologies
synonym: "Large intestinal submucosa" EXACT []
synonym: "large intestinal submucosa" EXACT []
synonym: "large intestine submucosa" EXACT []
synonym: "Submucosa of large intestine" EXACT []
xref: FMA:14970 ! Submucosa of large intestine
xref: MA:0002690 ! large intestine submucosa
is_a: UBERON:0000009 ! submucosa
intersection_of: UBERON:0000009 ! submucosa
intersection_of: part_of UBERON:0000059 ! large intestine
relationship: part_of UBERON:0001169 ! wall of large intestine
xref: ncithesaurus:Large_Intestinal_Submucosa ! Large Intestinal Submucosa

[Term]
id: UBERON:0001209
name: serosa of large intestine
alt_id: UBERON:FMA_14975-MA_0001546
comment: TODO - check serosa/peritoneum
synonym: "Large intestinal serosa" EXACT []
synonym: "large intestinal serosa" EXACT []
synonym: "large intestine serosa" EXACT []
synonym: "Serosa of large intestine" EXACT []
synonym: "Serous coat of large intestine" EXACT []
synonym: "serous coat of large intestine" EXACT []
synonym: "Visceral peritoneum of large intestine" EXACT []
synonym: "visceral peritoneum of large intestine" EXACT []
xref: FMA:14975 ! Serosa of large intestine
xref: MA:0001546 ! large intestine serosa
is_a: UBERON:0001243 ! serosa of intestine
intersection_of: UBERON:0000042 ! serous membrane
intersection_of: part_of UBERON:0000059 ! large intestine
relationship: part_of UBERON:0001169 ! wall of large intestine

[Term]
id: UBERON:0001210
name: muscularis mucosae of small intestine
alt_id: UBERON:FMA_15051-MA_0002687
comment: This class was created automatically from a combination of ontologies
synonym: "Lamina muscularis mucosae (Tunica Mucosa)(Intestinum tenue)" EXACT []
synonym: "lamina muscularis mucosae (tunica mucosa)(intestinum tenue)" EXACT []
synonym: "Lamina muscularis of small intestine mucous membrane" EXACT []
synonym: "lamina muscularis of small intestine mucous membrane" EXACT []
synonym: "Muscularis mucosae of small intestine" EXACT []
synonym: "small intestine muscularis mucosa" EXACT []
xref: FMA:15051 ! Muscularis mucosae of small intestine
xref: MA:0002687 ! small intestine muscularis mucosa
is_a: UBERON:0001135 ! smooth muscle tissue
relationship: part_of UBERON:0001204 ! mucosa of small intestine
relationship: part_of UBERON:0001240 ! muscularis mucosae of intestine
xref: ncithesaurus:Small_Intestinal_Muscularis_Mucosa ! Small Intestinal Muscularis Mucosa

[Term]
id: UBERON:0001211
name: aggregated lymphoid follicle of small intestine
alt_id: UBERON:FMA_15054-MA_0000137
def: "nodular lymphoid structures on the serosal surface of the small intestine." [Wikipedia:Peyer's_patch]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Aggregated lymphoid follicle of small intestine" EXACT []
synonym: "Peyer's patch" EXACT []
xref: FMA:15054 ! Aggregated lymphoid follicle of small intestine
xref: GAID:950 ! peyer's patch
xref: MA:0000137 ! peyer's patch
is_a: UBERON:0001962 ! gut-associated lymphoid tissue
relationship: part_of UBERON:0000160 ! intestine

[Term]
id: UBERON:0001212
name: duodenal gland
alt_id: UBERON:FMA_15060-MA_0001551
def: "." [Wikipedia:Brunner's_gland]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Brunner's gland" EXACT []
synonym: "brunner's gland" EXACT []
synonym: "Duodenal gland" EXACT []
synonym: "Gland of Brunner" EXACT []
synonym: "gland of brunner" EXACT []
xref: FMA:15060 ! Duodenal gland
xref: GAID:314 ! brunner's gland
xref: MA:0001551 ! brunner's gland
is_a: UBERON:0002530 ! gland
relationship: part_of UBERON:0001242 ! intestinal mucosa
relationship: part_of UBERON:0002108 ! small intestine
relationship: part_of UBERON:0002330 ! exocrine system
xref: ncithesaurus:Brunner_s_Gland ! Brunner's Gland
xref: BTO:0002376 ! duodenal gland

[Term]
id: UBERON:0001213
name: intestinal villus
alt_id: UBERON:FMA_15072-ZFA_0005125
def: "The entire digestive tract is lined by well developed villi, which are longest in the intestinal bulb and decrease progressively in size towards the caudal end of the intestine. No crypts are present, but, the regions between the villi, the intervillus pockets, have a crypt-like function. Cells are produced in the intervillus pockets and shed from the villus tips.<a href='ZFIN_jump?record=ZDB-PUB-050209-3'>Crosnier et al. 2005</a>" [Wikipedia:Intestinal_villus, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Intestinal villus" EXACT []
synonym: "Villus intestinalis (Intestinum tenue)" EXACT []
synonym: "villus intestinalis (intestinum tenue)" EXACT []
xref: FMA:15072 ! Intestinal villus
xref: TAO:0005125 ! intestinal villus
xref: ZFA:0005125 ! intestinal villus
is_a: UBERON:0000479 ! portion of tissue
relationship: part_of UBERON:0001277 ! intestinal epithelium

[Term]
id: UBERON:0001214
name: pancreatic tributary of splenic vein
alt_id: UBERON:FMA_15388-MA_0002189
def: "." [Wikipedia:Pancreatic_vein]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Pancreatic tributary of splenic vein" EXACT []
synonym: "Pancreatic vein" EXACT []
synonym: "pancreatic vein" EXACT []
xref: FMA:15388 ! Pancreatic tributary of splenic vein
xref: MA:0002189 ! pancreatic vein
is_a: UBERON:0002017 ! portal vein
xref: ncithesaurus:Pancreatic_Vein ! Pancreatic Vein

[Term]
id: UBERON:0001215
name: inferior mesenteric vein
alt_id: UBERON:FMA_15391-MA_0002178
def: "." [Wikipedia:Inferior_mesenteric_vein]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Inferior mesenteric vein" EXACT []
xref: EHDAA:8712 ! inferior mesenteric vein
xref: FMA:15391 ! Inferior mesenteric vein
xref: HOG:0001118 ! inferior mesenteric vein
xref: MA:0002178 ! inferior mesenteric vein
xref: OpenCyc:Mx4rvcV53ZwpEbGdrcN5Y29ycA
is_a: UBERON:0002017 ! portal vein
xref: ncithesaurus:Inferior_Mesenteric_Vein ! Inferior Mesenteric Vein
xref: BTO:0002782 ! inferior mesenteric vein

[Term]
id: UBERON:0001216
name: jejunal vein
alt_id: UBERON:FMA_15402-MA_0002153
comment: This class was created automatically from a combination of ontologies
synonym: "Jejunal vein" EXACT []
xref: FMA:15402 ! Jejunal vein
xref: MA:0002153 ! jejunal vein
is_a: UBERON:0002017 ! portal vein
relationship: part_of UBERON:0001138 ! superior mesenteric vein

[Term]
id: UBERON:0001217
name: ileal vein
alt_id: UBERON:FMA_15405-MA_0002140
comment: This class was created automatically from a combination of ontologies
synonym: "Ileal vein" EXACT []
xref: FMA:15405 ! Ileal vein
xref: MA:0002140 ! ileal vein
is_a: UBERON:0002017 ! portal vein
relationship: part_of UBERON:0001138 ! superior mesenteric vein
xref: ncithesaurus:Ileal_Vein ! Ileal Vein

[Term]
id: UBERON:0001218
name: middle colic vein
alt_id: UBERON:FMA_15406-MA_0002181
def: "." [Wikipedia:Middle_colic_vein]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Middle colic vein" EXACT []
synonym: "Vena colica media (intermedia)" EXACT []
synonym: "vena colica media (intermedia)" EXACT []
xref: FMA:15406 ! Middle colic vein
xref: MA:0002181 ! middle colic vein
is_a: UBERON:0002017 ! portal vein
relationship: part_of UBERON:0001138 ! superior mesenteric vein

[Term]
id: UBERON:0001219
name: ileocolic vein
alt_id: UBERON:FMA_15408-MA_0002141
def: "." [Wikipedia:Ileocolic_vein]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Ileocolic vein" EXACT []
xref: FMA:15408 ! Ileocolic vein
xref: MA:0002141 ! ileocolic vein
is_a: UBERON:0002017 ! portal vein
relationship: part_of UBERON:0001138 ! superior mesenteric vein
xref: ncithesaurus:Ileocolic_Vein ! Ileocolic Vein

[Term]
id: UBERON:0001220
name: quadratus lumborum
alt_id: UBERON:FMA_15569-MA_0002362
def: "." [Wikipedia:Quadratus_lumborum]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Muscle of posterior abdominal wall" EXACT []
synonym: "muscle of posterior abdominal wall" EXACT []
synonym: "Quadratus lumborum" EXACT []
xref: FMA:15569 ! Quadratus lumborum
xref: MA:0002362 ! quadratus lumborum
is_a: UBERON:0002378 ! muscle of abdomen
xref: ncithesaurus:Quadratus_Lumborum ! Quadratus Lumborum

[Term]
id: UBERON:0001221
name: transversus abdominis
alt_id: UBERON:FMA_15570-MA_0002396
def: "." [Wikipedia:Transversus_abdominis]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Transverse abdominal" EXACT []
synonym: "transverse abdominal" EXACT []
synonym: "Transversus abdominis" EXACT []
xref: EHDAA:8254 ! transversus abdominis
xref: FMA:15570 ! Transversus abdominis
xref: HOG:0000845 ! transversus abdominis
xref: MA:0002396 ! transversus abdominis
is_a: UBERON:0002461 ! anterior abdominal wall muscle
xref: ncithesaurus:Transversus_Abdominis ! Transversus Abdominis

[Term]
id: UBERON:0001222
name: right ureter
alt_id: UBERON:FMA_15571-MA_0001685
comment: This class was created automatically from a combination of ontologies
synonym: "Right ureter" EXACT []
xref: FMA:15571 ! Right ureter
xref: MA:0001685 ! right ureter
is_a: UBERON:0000056 ! ureter
xref: ncithesaurus:Right_Ureter ! Right Ureter

[Term]
id: UBERON:0001223
name: left ureter
alt_id: UBERON:FMA_15572-MA_0001684
comment: This class was created automatically from a combination of ontologies
synonym: "Left ureter" EXACT []
xref: FMA:15572 ! Left ureter
xref: MA:0001684 ! left ureter
is_a: UBERON:0000056 ! ureter
xref: ncithesaurus:Left_Ureter ! Left Ureter

[Term]
id: UBERON:0001224
name: renal pelvis
alt_id: UBERON:FMA_15575-MA_0000374
def: "funnel-like dilated proximal part of the ureter in the kidney." [Wikipedia:Renal_pelvis]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "kidney pelvis" EXACT []
synonym: "Pelvis of ureter" EXACT []
synonym: "pelvis of ureter" EXACT []
synonym: "Renal pelvis" EXACT []
xref: FMA:15575 ! Renal pelvis
xref: GAID:426 ! kidney pelvis
xref: MA:0000374 ! kidney pelvis
is_a: UBERON:0000063 ! organ segment
relationship: part_of UBERON:0002113 ! kidney
relationship: part_of UBERON:0000056 ! ureter
xref: ncithesaurus:Renal_Pelvis ! Renal Pelvis

[Term]
id: UBERON:0001225
name: cortex of kidney
alt_id: UBERON:FMA_15581-MA_0000372
def: "Region of parenchyma of kidney representing the outer portion." [Wikipedia:Kidney_cortex]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Cortex of kidney" EXACT []
synonym: "kidney cortex" EXACT []
synonym: "Renal cortex" EXACT []
synonym: "renal cortex" RELATED []
xref: BTO:0001166
xref: FMA:15581 ! Cortex of kidney
xref: GAID:424 ! kidney cortex
xref: galen:CortexOfKidney
xref: MA:0000372 ! kidney cortex
is_a: UBERON:0001851 ! cortex
intersection_of: UBERON:0001851 ! cortex
intersection_of: part_of UBERON:0002113 ! kidney
relationship: part_of UBERON:0002113 ! kidney
xref: ncithesaurus:Renal_Cortex ! Renal Cortex

[Term]
id: UBERON:0001226
name: major calyx
alt_id: UBERON:FMA_15613-MA_0001644
def: "." [Wikipedia:Major_calyx]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Major calix" EXACT []
synonym: "major calix" EXACT []
synonym: "Major calyx" EXACT []
xref: FMA:15613 ! Major calyx
xref: MA:0001644 ! major calyx
is_a: UBERON:0000063 ! organ segment
relationship: part_of UBERON:0001224 ! renal pelvis

[Term]
id: UBERON:0001227
name: minor calyx
alt_id: UBERON:FMA_15614-MA_0001645
def: "." [Wikipedia:Minor_calyx]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Minor calix" EXACT []
synonym: "minor calix" EXACT []
synonym: "Minor calyx" EXACT []
xref: FMA:15614 ! Minor calyx
xref: MA:0001645 ! minor calyx
is_a: UBERON:0000063 ! organ segment
relationship: part_of UBERON:0001224 ! renal pelvis

[Term]
id: UBERON:0001228
name: renal papilla
alt_id: UBERON:FMA_15622-MA_0002730
def: "." [Wikipedia:Renal_papilla]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Renal papilla" EXACT []
xref: FMA:15622 ! Renal papilla
xref: MA:0002730 ! renal papilla
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001224 ! renal pelvis
relationship: part_of UBERON:0001294 ! inner medulla of kidney
xref: ncithesaurus:Renal_Papilla ! Renal Papilla
xref: BTO:0003925 ! renal papilla

[Term]
id: UBERON:0001229
name: renal corpuscle
alt_id: UBERON:FMA_15625-MA_0000376
def: "." [Wikipedia:Renal_corpuscle]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Corpusculum renale" EXACT []
synonym: "corpusculum renale" EXACT []
synonym: "cortical renal corpuscle" RELATED []
synonym: "malphighian corpuscle" RELATED []
synonym: "Malphigian corpuscle" EXACT []
synonym: "malphigian corpuscle" EXACT []
synonym: "Renal corpuscle" EXACT []
xref: BTO:0000333
xref: FMA:15625 ! Renal corpuscle
xref: HOG:0001262 ! renal corpuscle
xref: MA:0000376 ! renal corpuscle
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001225 ! cortex of kidney
relationship: part_of UBERON:0001285 ! nephron
xref: ncithesaurus:Renal_Corpuscle ! Renal Corpuscle

[Term]
id: UBERON:0001230
name: glomerular capsule
alt_id: UBERON:FMA_15626-MA_0001660
def: "." [Wikipedia:Glomerular_capsule]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Bowman's capsule" EXACT []
synonym: "bowman's capsule" RELATED []
synonym: "Glomerular capsule" EXACT []
xref: FMA:15626 ! Glomerular capsule
xref: MA:0001660 ! glomerular capsule
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001229 ! renal corpuscle

[Term]
id: UBERON:0001231
name: renal tubule
alt_id: UBERON:FMA_15627-ZFA_0001287
def: "." [Wikipedia:Renal_tubule]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Renal tubule" EXACT []
synonym: "renal tubules" RELATED []
synonym: "Tubulus renalis" EXACT []
synonym: "tubulus renalis" EXACT []
xref: BTO:0000343
xref: FMA:15627 ! Renal tubule
xref: MA:0000377 ! renal tubule
xref: TAO:0001287 ! renal tubule
xref: ZFA:0001287 ! renal tubule
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001285 ! nephron
xref: ncithesaurus:Renal_Tubule ! Renal Tubule

[Term]
id: UBERON:0001232
name: collecting duct of renal tubule
alt_id: UBERON:FMA_15628-MA_0000371
def: "." [Wikipedia:Renal_collecting_tubule]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Collecting duct of renal tubule" EXACT []
synonym: "collecting tubule" RELATED []
synonym: "kidney collecting duct" EXACT []
synonym: "Renal collecting tubule" EXACT []
synonym: "renal collecting tubule" EXACT []
synonym: "Tubulus renalis colligens" EXACT []
synonym: "tubulus renalis colligens" EXACT []
xref: FMA:15628 ! Collecting duct of renal tubule
xref: MA:0000371 ! kidney collecting duct
is_a: UBERON:0000058 ! duct
relationship: part_of UBERON:0002113 ! kidney

[Term]
id: UBERON:0001233
name: right adrenal gland
alt_id: UBERON:FMA_15629-MA_0000719
comment: This class was created automatically from a combination of ontologies
synonym: "Right adrenal gland" EXACT []
synonym: "Right suprarenal gland" EXACT []
synonym: "right suprarenal gland" EXACT []
xref: FMA:15629 ! Right adrenal gland
xref: MA:0000719 ! right adrenal gland
is_a: UBERON:0002369 ! adrenal gland
xref: ncithesaurus:Right_Adrenal_Gland ! Right Adrenal Gland

[Term]
id: UBERON:0001234
name: left adrenal gland
alt_id: UBERON:FMA_15630-MA_0000718
comment: This class was created automatically from a combination of ontologies
synonym: "Left adrenal gland" EXACT []
synonym: "Left suprarenal gland" EXACT []
synonym: "left suprarenal gland" EXACT []
xref: FMA:15630 ! Left adrenal gland
xref: MA:0000718 ! left adrenal gland
is_a: UBERON:0002369 ! adrenal gland
xref: ncithesaurus:Left_Adrenal_Gland ! Left Adrenal Gland

[Term]
id: UBERON:0001235
name: adrenal cortex
alt_id: UBERON:FMA_15632-MA_0000118-XAO_0000165
def: "." [Wikipedia:Adrenal_cortex]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Adrenal cortex" EXACT []
synonym: "adrenal gland cortex" EXACT []
synonym: "Cortex (Glandula suprarenalis)" EXACT []
synonym: "cortex (glandula suprarenalis)" EXACT []
synonym: "Cortex of adrenal gland" EXACT []
synonym: "cortex of adrenal gland" EXACT []
synonym: "Cortex of suprarenal gland" EXACT []
synonym: "cortex of suprarenal gland" EXACT []
synonym: "interrenal tissue" RELATED []
synonym: "Suprarenal cortex" EXACT []
synonym: "suprarenal cortex" EXACT []
xref: BTO:0000045
xref: EFO:0000237 ! adrenal cortex
xref: FMA:15632 ! Adrenal cortex
xref: GAID:447 ! adrenal cortex
xref: HOG:0001481 ! adrenal gland cortex
xref: MA:0000118 ! adrenal gland cortex
xref: MAT:0000494 ! adrenal cortex
xref: ncithesaurus:Adrenal_Cortex
xref: XAO:0000165 ! adrenal cortex
is_a: UBERON:0001851 ! cortex
intersection_of: UBERON:0001851 ! cortex
intersection_of: part_of UBERON:0002369 ! adrenal gland
relationship: part_of UBERON:0002369 ! adrenal gland

[Term]
id: UBERON:0001236
name: adrenal medulla
alt_id: UBERON:FMA_15633-MA_0000119-XAO_0000166
def: "." [Wikipedia:Adrenal_medulla]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "adrenal gland medulla" EXACT []
synonym: "Adrenal medulla" EXACT []
synonym: "chromaffin cells" RELATED []
synonym: "Medulla (Glandula suprarenalis)" EXACT []
synonym: "medulla (glandula suprarenalis)" EXACT []
synonym: "Medulla of suprarenal gland" EXACT []
synonym: "medulla of suprarenal gland" EXACT []
synonym: "Suprarenal medulla" EXACT []
synonym: "suprarenal medulla" EXACT []
xref: BTO:0000049
xref: EFO:0000852 ! adrenal medulla
xref: FMA:15633 ! Adrenal medulla
xref: GAID:451 ! adrenal medulla
xref: HOG:0001378 ! adrenal medulla
xref: MA:0000119 ! adrenal gland medulla
xref: MAT:0000495 ! adrenal medulla
xref: ncithesaurus:Adrenal_Medulla
xref: XAO:0000166 ! adrenal medulla
is_a: UBERON:0000958 ! medulla
intersection_of: UBERON:0000958 ! medulla
intersection_of: part_of UBERON:0002369 ! adrenal gland
relationship: part_of UBERON:0002369 ! adrenal gland

[Term]
id: UBERON:0001237
name: paraaortic body
alt_id: UBERON:FMA_15647-MA_0001137
def: "." [Wikipedia:Organ_of_Zuckerkandl]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Organ of Zuckerkandl" EXACT []
synonym: "organ of zuckerkandl" EXACT []
synonym: "Para-aortic body" EXACT []
synonym: "para-aortic body" RELATED []
synonym: "Paraaortic body" EXACT []
synonym: "paraganglia of zuckerkandl" RELATED []
xref: FMA:15647 ! Paraaortic body
xref: GAID:444 ! para-aortic body
xref: MA:0001137 ! organ of zuckerkandl
is_a: UBERON:0000479 ! portion of tissue

[Term]
id: UBERON:0001238
name: lamina propria of small intestine
alt_id: UBERON:FMA_15651-MA_0001554
comment: This class was created automatically from a combination of ontologies
synonym: "Lamina propria mucosae of small intestine" EXACT []
synonym: "lamina propria mucosae of small intestine" EXACT []
synonym: "Lamina propria of mucosa of small intestine" EXACT []
synonym: "lamina propria of mucosa of small intestine" EXACT []
synonym: "Lamina propria of small intestine" EXACT []
synonym: "Small intestine lamina propria" EXACT []
synonym: "small intestine lamina propria" EXACT []
xref: FMA:15651 ! Lamina propria of small intestine
xref: MA:0001554 ! small intestine lamina propria
is_a: UBERON:0000030 ! lamina propria
intersection_of: UBERON:0000030 ! lamina propria
intersection_of: part_of UBERON:0002108 ! small intestine
relationship: part_of UBERON:0001204 ! mucosa of small intestine
xref: ncithesaurus:Small_Intestinal_Lamina_Propria ! Small Intestinal Lamina Propria

[Term]
id: UBERON:0001239
name: muscularis mucosae of large intestine
alt_id: UBERON:FMA_15655-MA_0002689
comment: This class was created automatically from a combination of ontologies
synonym: "Lamina muscularis of large intestine mucosa" EXACT []
synonym: "lamina muscularis of large intestine mucosa" EXACT []
synonym: "Lamina muscularis of large intestine mucous membrane" EXACT []
synonym: "lamina muscularis of large intestine mucous membrane" EXACT []
synonym: "large intestine muscularis mucosa" EXACT []
synonym: "Muscularis mucosae of large intestine" EXACT []
xref: FMA:15655 ! Muscularis mucosae of large intestine
xref: MA:0002689 ! large intestine muscularis mucosa
is_a: UBERON:0001135 ! smooth muscle tissue
relationship: part_of UBERON:0001207 ! mucosa of large intestine
relationship: part_of UBERON:0001240 ! muscularis mucosae of intestine
xref: ncithesaurus:Large_Intestinal_Muscularis_Mucosa ! Large Intestinal Muscularis Mucosa

[Term]
id: UBERON:0001240
name: muscularis mucosae of intestine
alt_id: UBERON:FMA_15691-MA_0002694
comment: This class was created automatically from a combination of ontologies
synonym: "intestine muscularis mucosa" EXACT []
synonym: "Muscularis mucosae of intestine" EXACT []
xref: FMA:15691 ! Muscularis mucosae of intestine
xref: MA:0002694 ! intestine muscularis mucosa
is_a: UBERON:0000477 ! anatomical cluster
relationship: part_of UBERON:0001242 ! intestinal mucosa

[Term]
id: UBERON:0001241
name: crypt of lieberkuhn of small intestine
alt_id: UBERON:FMA_15693-MA_0001552
comment: This class was created automatically from a combination of ontologies
synonym: "Crypt of Lieberkuhn of small intestine" EXACT []
synonym: "Small intestinal crypt of Lieberkuhn" EXACT []
synonym: "small intestinal crypt of lieberkuhn" EXACT []
synonym: "small intestine crypt of lieberkuhn" EXACT []
xref: FMA:15693 ! Crypt of Lieberkuhn of small intestine
xref: MA:0001552 ! small intestine crypt of lieberkuhn
is_a: UBERON:0001983 ! crypt of lieberkuhn
intersection_of: UBERON:0001983 ! crypt of lieberkuhn
intersection_of: part_of UBERON:0002108 ! small intestine
relationship: part_of UBERON:0002108 ! small intestine
xref: ncithesaurus:Small_Intestinal_Crypt_of_Lieberkuhn ! Small Intestinal Crypt of Lieberkuhn

[Term]
id: UBERON:0001242
name: intestinal mucosa
alt_id: UBERON:FMA_15695-MA_0001537
def: "." [Wikipedia:Intestinal_mucosa]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Intestinal mucosa" EXACT []
synonym: "intestine mucosa" EXACT []
synonym: "Mucosa of intestine" EXACT []
synonym: "mucosa of intestine" EXACT []
xref: BTO:0000642
xref: FMA:15695 ! Intestinal mucosa
xref: GAID:296 ! intestinal mucosa
xref: MA:0001537 ! intestine mucosa
is_a: UBERON:0000477 ! anatomical cluster
intersection_of: UBERON:0000344 ! mucosa
intersection_of: OBO_REL:part_of UBERON:0000160 ! intestine
relationship: part_of UBERON:0001262 ! wall of intestine
xref: ncithesaurus:Intestinal_Mucosa ! Intestinal Mucosa

[Term]
id: UBERON:0001243
name: serosa of intestine
alt_id: UBERON:FMA_15701-MA_0001538
comment: TODO - check serosa/peritoneum
synonym: "Intestinal serosa" EXACT []
synonym: "intestinal serosa" EXACT []
synonym: "intestine serosa" EXACT []
synonym: "Serosa of intestine" EXACT []
synonym: "Visceral peritoneum of intestine" EXACT []
synonym: "visceral peritoneum of intestine" EXACT []
xref: FMA:15701 ! Serosa of intestine
xref: MA:0001538 ! intestine serosa
is_a: UBERON:0000042 ! serous membrane
intersection_of: UBERON:0000042 ! serous membrane
intersection_of: part_of UBERON:0001262 ! wall of intestine
relationship: part_of UBERON:0001262 ! wall of intestine

[Term]
id: UBERON:0001244
name: internal anal sphincter
alt_id: UBERON:FMA_15710-MA_0001534
def: "." [Wikipedia:Internal_anal_sphincter]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Circular layer of anal muscularis externa" EXACT []
synonym: "circular layer of anal muscularis externa" EXACT []
synonym: "Circular layer of muscularis externa of anal canal" EXACT []
synonym: "circular layer of muscularis externa of anal canal" EXACT []
synonym: "Circular layer of muscularis propria of anal canal" EXACT []
synonym: "circular layer of muscularis propria of anal canal" EXACT []
synonym: "Circular muscle layer of anal canal" EXACT []
synonym: "circular muscle layer of anal canal" EXACT []
synonym: "Internal anal sphincter" EXACT []
xref: FMA:15710 ! Internal anal sphincter
xref: MA:0001534 ! internal anal sphincter
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001353 ! anal part of perineum
xref: ncithesaurus:Internal_Anal_Sphincter ! Internal Anal Sphincter

[Term]
id: UBERON:0001245
name: anus
alt_id: UBERON:FMA_15711-MA_0000331-ZFA_0000066
def: "Orifice at the opposite end of an animal's digestive tract from the mouth. Its function is to expel feces, unwanted semi-solid matter produced during digestion, which, depending on the type of animal, may be one or more of: matter which the animal cannot digest, such as bones; food material after all the nutrients have been extracted, for example cellulose or lignin; ingested matter which would be toxic if it remained in the digestive tract; and dead or excess gut bacteria and other endosymbionts." [Wikipedia:Anus, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Anal orifice" EXACT []
synonym: "anal orifice" EXACT []
synonym: "Anus" EXACT []
synonym: "proctodeum" EXACT []
xref: FMA:15711 ! Anus
xref: GAID:312 ! anus
xref: galen:Anus
xref: HOG:0000139 ! proctodeum
xref: MA:0000331 ! anus
xref: OpenCyc:Mx4rvVjaEZwpEbGdrcN5Y29ycA
xref: TAO:0000066 ! proctodeum
xref: WBbt:0005364 ! anus
xref: ZFA:0000066 ! proctodeum
is_a: UBERON:0000161 ! orifice
relationship: develops_from UBERON:0000100 ! blastopore
relationship: part_of UBERON:0001353 ! anal part of perineum
relationship: part_of UBERON:0001555 ! gut
xref: ncithesaurus:Proctodeum ! Proctodeum
xref: BTO:0001680 ! anus

[Term]
id: UBERON:0001246
name: interlobular bile duct
alt_id: UBERON:FMA_15767-MA_0002668
comment: This class was created automatically from a combination of ontologies
synonym: "Interlobular bile duct" EXACT []
xref: FMA:15767 ! Interlobular bile duct
xref: MA:0002668 ! interlobular bile duct
is_a: UBERON:0002394 ! bile duct
relationship: part_of UBERON:0000477 ! anatomical cluster
relationship: part_of UBERON:0001279 ! portal triad
xref: ncithesaurus:Interlobular_Bile_Duct ! Interlobular Bile Duct

[Term]
id: UBERON:0001247
name: falciform ligament
alt_id: UBERON:FMA_15823-MA_0001622
def: "." [Wikipedia:Falciform_ligament]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Falciform ligament" EXACT []
synonym: "Falciform ligament of liver" EXACT []
synonym: "falciform ligament of liver" EXACT []
synonym: "Ligamentum falciforme (Hepatis)" EXACT []
synonym: "ligamentum falciforme (hepatis)" EXACT []
xref: EHDAA:4856 ! falciform ligament
xref: FMA:15823 ! Falciform ligament
xref: HOG:0000355 ! falciform ligament
xref: MA:0001622 ! falciform ligament
is_a: UBERON:0000211 ! ligament
is_a: UBERON:0002095 ! mesentery
xref: ncithesaurus:Falciform_Ligament ! Falciform Ligament

[Term]
id: UBERON:0001248
name: hilum of spleen
alt_id: UBERON:FMA_15841-MA_0002670
def: "." [Wikipedia:Splenic_hilum]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Hilum of spleen" EXACT []
synonym: "spleen hilum" EXACT []
synonym: "Splenic hilum" EXACT []
synonym: "splenic hilum" EXACT []
xref: FMA:15841 ! Hilum of spleen
xref: MA:0002670 ! spleen hilum
is_a: UBERON:0000464 ! anatomical space
relationship: part_of UBERON:0002106 ! spleen
xref: ncithesaurus:Splenic_Hilum ! Splenic Hilum

[Term]
id: UBERON:0001249
name: lymphoid nodule of spleen
alt_id: UBERON:FMA_15843-MA_0002672
comment: This class was created automatically from a combination of ontologies
synonym: "Lymphatic follicle of spleen" EXACT []
synonym: "lymphatic follicle of spleen" EXACT []
synonym: "Lymphoid follicle of spleen" EXACT []
synonym: "lymphoid follicle of spleen" EXACT []
synonym: "Lymphoid nodule of spleen" EXACT []
synonym: "Malpighian body" EXACT []
synonym: "malpighian body" EXACT []
synonym: "spleen lymphoid follicle" EXACT []
synonym: "spleen lymphoid nodule" RELATED []
synonym: "Splenic lymphatic follicle" EXACT []
synonym: "splenic lymphatic follicle" EXACT []
xref: FMA:15843 ! Lymphoid nodule of spleen
xref: MA:0002672 ! spleen lymphoid follicle
is_a: UBERON:0001744 ! lymphoid tissue
intersection_of: UBERON:0000444 ! lymphoid follicle
intersection_of: OBO_REL:part_of UBERON:0002106 ! spleen
relationship: part_of UBERON:0001959 ! white pulp of spleen

[Term]
id: UBERON:0001250
name: red pulp of spleen
alt_id: UBERON:FMA_15844-MA_0000756
def: "." [Wikipedia:Red_pulp]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Red pulp" EXACT []
synonym: "red pulp" EXACT []
synonym: "Red pulp of spleen" EXACT []
synonym: "spleen red pulp" EXACT []
synonym: "Splenic red pulp" EXACT []
synonym: "splenic red pulp" EXACT []
xref: FMA:15844 ! Red pulp of spleen
xref: MA:0000756 ! spleen red pulp
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0002106 ! spleen
xref: ncithesaurus:Splenic_Red_Pulp ! Splenic Red Pulp

[Term]
id: UBERON:0001251
name: marginal zone of spleen
alt_id: UBERON:FMA_15852-MA_0000755
comment: This class was created automatically from a combination of ontologies
synonym: "Junctional zone of spleen" EXACT []
synonym: "junctional zone of spleen" EXACT []
synonym: "Marginal zone of spleen" EXACT []
synonym: "spleen marginal zone" EXACT []
xref: FMA:15852 ! Marginal zone of spleen
xref: MA:0000755 ! spleen marginal zone
is_a: UBERON:0000061 ! anatomical structure
relationship: part_of UBERON:0002106 ! spleen

[Term]
id: UBERON:0001252
name: adventitia of ureter
alt_id: UBERON:FMA_15892-MA_0002652
comment: This class was created automatically from a combination of ontologies
synonym: "Adventitia of ureter" EXACT []
synonym: "External adventitia of ureter" EXACT []
synonym: "external adventitia of ureter" EXACT []
synonym: "ureter adventitia" EXACT []
synonym: "Ureteral adventitia" EXACT []
synonym: "ureteral adventitia" EXACT []
xref: FMA:15892 ! Adventitia of ureter
xref: MA:0002652 ! ureter adventitia
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001008 ! urinary system

[Term]
id: UBERON:0001253
name: lamina propria of ureter
alt_id: UBERON:FMA_15896-MA_0002653
comment: This class was created automatically from a combination of ontologies
synonym: "Lamina propria of ureter" EXACT []
synonym: "ureter lamina propria" EXACT []
xref: FMA:15896 ! Lamina propria of ureter
xref: MA:0002653 ! ureter lamina propria
is_a: UBERON:0000030 ! lamina propria
intersection_of: UBERON:0000030 ! lamina propria
intersection_of: part_of UBERON:0000056 ! ureter
relationship: part_of UBERON:0001008 ! urinary system

[Term]
id: UBERON:0001254
name: transitional epithelium of ureter
alt_id: UBERON:FMA_15897-MA_0002655
comment: This class was created automatically from a combination of ontologies
synonym: "Transitional epithelium of ureter" EXACT []
synonym: "ureter transitional epithelium" RELATED []
synonym: "ureter urothelium" EXACT []
synonym: "Urothelium of ureter" EXACT []
synonym: "urothelium of ureter" EXACT []
xref: FMA:15897 ! Transitional epithelium of ureter
xref: MA:0002655 ! ureter urothelium
is_a: UBERON:0000483 ! epithelium

[Term]
id: UBERON:0001255
name: urinary bladder
alt_id: UBERON:FMA_15900-FMA_7203-MA_0000368-MA_0000380-MIAA_0000118-MIAA_0000119-MIAA_0000122-WBbt_0005775-XAO_0000154-ZFA_0000529
def: "Organ with organ cavity which is continuous proximally with the right and left ureters and distally with the urethra. Examples: There is only one urinary bladder. // Four processes (canals) of the excretory canal cell each contain a central collecting lumen which feeds to a central lumenal canal in the cell body; the central canal forms a specialized membrane to release fluids into the excretory duct. These five canals form a continuous H-shaped channel which extends almost the full length of the body, generally in contact with the lateral hypodermis and the pseudocoelom." [WA:dh, Wikipedia:Urinary_bladder]
comment: This class was created automatically from a combination of ontologies. TODO: split
subset: uberon_slim
synonym: "Bladder" EXACT []
synonym: "bladder" EXACT []
synonym: "excretory canal" BROAD []
synonym: "Urinary bladder" EXACT []
xref: AAO:0000623 ! urinary_bladder
xref: BTO:0000123
xref: EFO:0000290 ! bladder
xref: EHDAA:9328 ! bladder
xref: FMA:15900 ! Urinary bladder
xref: GAID:0000004 ! urinary bladder
xref: HOG:0000740 ! urinary bladder
xref: MA:0000380 ! urinary bladder
xref: MAT:0000122 ! bladder
xref: MIAA:0000122 ! bladder
xref: ncithesaurus:Bladder
xref: OpenCyc:Mx4rvVjMmZwpEbGdrcN5Y29ycA
xref: XAO:0000154 ! bladder
is_a: UBERON:0000489 ! cavitated compound organ
is_a: UBERON:0002075 ! viscus
relationship: develops_from UBERON:0000164 ! urogenital sinus
relationship: part_of UBERON:0001556 ! lower urinary tract
relationship: part_of UBERON:0002323 ! body cavity
relationship: part_of UBERON:0002355 ! pelvis
relationship: part_of UBERON:0002405 ! immune system

[Term]
id: UBERON:0001256
name: wall of urinary bladder
alt_id: UBERON:FMA_15902-MA_0002493
comment: This class was created automatically from a combination of ontologies
synonym: "Urinary bladder wall" EXACT []
synonym: "urinary bladder wall" EXACT []
synonym: "Wall of urinary bladder" EXACT []
xref: FMA:15902 ! Wall of urinary bladder
xref: MA:0002493 ! urinary bladder wall
is_a: UBERON:0000060 ! wall
intersection_of: UBERON:0000060 ! wall
intersection_of: part_of UBERON:0001255 ! urinary bladder
relationship: part_of UBERON:0001255 ! urinary bladder

[Term]
id: UBERON:0001257
name: trigone of urinary bladder
alt_id: UBERON:FMA_15910-MA_0002492
def: "." [Wikipedia:Trigone_of_urinary_bladder]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Deep trigone" EXACT []
synonym: "deep trigone" EXACT []
synonym: "Lieutaud's trigone" EXACT []
synonym: "lieutaud's trigone" EXACT []
synonym: "Trigone of bladder" EXACT []
synonym: "trigone of bladder" EXACT []
synonym: "Trigone of urinary bladder" EXACT []
synonym: "Urinary bladder trigone" EXACT []
synonym: "urinary bladder trigone" EXACT []
synonym: "Vesical trigone" EXACT []
synonym: "vesical trigone" EXACT []
xref: FMA:15910 ! Trigone of urinary bladder
xref: MA:0002492 ! urinary bladder trigone
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001255 ! urinary bladder

[Term]
id: UBERON:0001258
name: neck of urinary bladder
alt_id: UBERON:FMA_15912-MA_0002491
def: "." [Wikipedia:Neck_of_urinary_bladder]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Bladder neck" EXACT []
synonym: "bladder neck" EXACT []
synonym: "Neck of bladder" EXACT []
synonym: "neck of bladder" EXACT []
synonym: "Neck of urinary bladder" EXACT []
synonym: "Urinary bladder neck" EXACT []
synonym: "urinary bladder neck" EXACT []
synonym: "Vesical neck" EXACT []
synonym: "vesical neck" EXACT []
xref: FMA:15912 ! Neck of urinary bladder
xref: MA:0002491 ! urinary bladder neck
xref: ncithesaurus:Bladder_Neck
is_a: UBERON:0001560 ! neck of organ
relationship: part_of UBERON:0001255 ! urinary bladder

[Term]
id: UBERON:0001259
name: mucosa of urinary bladder
alt_id: UBERON:FMA_15928-MA_0001692
comment: This class was created automatically from a combination of ontologies
synonym: "Bladder mucosa" EXACT []
synonym: "bladder mucosa" EXACT []
synonym: "Mucosa of urinary bladder" EXACT []
synonym: "Mucous membrane of bladder" EXACT []
synonym: "mucous membrane of bladder" EXACT []
synonym: "Mucous membrane of urinary bladder" EXACT []
synonym: "mucous membrane of urinary bladder" EXACT []
synonym: "Urinary bladder mucosa" EXACT []
synonym: "urinary bladder mucosa" EXACT []
xref: EFO:0000293 ! bladder mucosa
xref: FMA:15928 ! Mucosa of urinary bladder
xref: MA:0001692 ! urinary bladder mucosa
is_a: UBERON:0000064 ! organ part
intersection_of: UBERON:0000344 ! mucosa
intersection_of: OBO_REL:part_of UBERON:0001255 ! urinary bladder
relationship: part_of UBERON:0001256 ! wall of urinary bladder
xref: ncithesaurus:Bladder_Mucosa ! Bladder Mucosa

[Term]
id: UBERON:0001260
name: serosa of urinary bladder
alt_id: UBERON:FMA_15932-MA_0001696
comment: TODO - check serosa/peritoneum
synonym: "Bladder serosa" EXACT []
synonym: "bladder serosa" EXACT []
synonym: "Serosa of bladder" EXACT []
synonym: "serosa of bladder" EXACT []
synonym: "Serosa of urinary bladder" EXACT []
synonym: "Serous coat of bladder" EXACT []
synonym: "serous coat of bladder" EXACT []
synonym: "Serous coat of urinary bladder" EXACT []
synonym: "serous coat of urinary bladder" EXACT []
synonym: "Urinary bladder serosa" EXACT []
synonym: "urinary bladder serosa" EXACT []
synonym: "Visceral peritoneum of urinary bladder" EXACT []
synonym: "visceral peritoneum of urinary bladder" EXACT []
xref: FMA:15932 ! Serosa of urinary bladder
xref: MA:0001696 ! urinary bladder serosa
is_a: UBERON:0000042 ! serous membrane
intersection_of: UBERON:0000042 ! serous membrane
intersection_of: part_of UBERON:0001255 ! urinary bladder
relationship: part_of UBERON:0001255 ! urinary bladder

[Term]
id: UBERON:0001261
name: lamina propria of urinary bladder
alt_id: UBERON:FMA_15935-MA_0001695
comment: This class was created automatically from a combination of ontologies
synonym: "Lamina propria of urinary bladder" EXACT []
synonym: "urinary bladder lamina propria" EXACT []
xref: FMA:15935 ! Lamina propria of urinary bladder
xref: MA:0001695 ! urinary bladder lamina propria
is_a: UBERON:0000030 ! lamina propria
intersection_of: UBERON:0000030 ! lamina propria
intersection_of: part_of UBERON:0001255 ! urinary bladder
relationship: part_of UBERON:0001259 ! mucosa of urinary bladder

[Term]
id: UBERON:0001262
name: wall of intestine
alt_id: UBERON:FMA_15949-MA_0002693
comment: This class was created automatically from a combination of ontologies
synonym: "Intestinal wall" EXACT []
synonym: "intestinal wall" EXACT []
synonym: "intestine wall" EXACT []
synonym: "Wall of intestine" EXACT []
xref: BTO:0000647
xref: FMA:15949 ! Wall of intestine
xref: MA:0002693 ! intestine wall
is_a: UBERON:0000477 ! anatomical cluster
intersection_of: UBERON:0000060 ! wall
intersection_of: part_of UBERON:0000160 ! intestine
relationship: part_of UBERON:0000160 ! intestine

[Term]
id: UBERON:0001263
name: pancreatic acinus
alt_id: UBERON:FMA_16011-MA_0002417
comment: This class was created automatically from a combination of ontologies
synonym: "Acinus pancreaticus" EXACT []
synonym: "acinus pancreaticus" EXACT []
synonym: "Pancreatic acinus" EXACT []
xref: FMA:16011 ! Pancreatic acinus
xref: MA:0002417 ! pancreatic acinus
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001264 ! pancreas
xref: ncithesaurus:Pancreatic_Acinus ! Pancreatic Acinus

[Term]
id: UBERON:0001264
name: pancreas
alt_id: UBERON:FMA_16017-FMA_16018-FMA_7198-MA_0000120-MA_0001582-MA_0002415-MIAA_0000075-XAO_0000136-XAO_0000137-ZFA_0000140-ZFA_0001249-ZFA_0001260
def: "Lobular organ the parenchyma of which consists of glandular acini which communicate via a duct system with the duodenum. Examples: There is only one pancreas. // Internal gland organ with distinct tissues with different endocrine and exocrine functions. Its rudiment has three parts, one dorsal and two ventral primordia. The ventral can be first detected at NF stage 37/38. The dorsal is clearly segregated from the duodenal wall by NF stage 39. At NF stage 40 the right and left primordia have fused just above the gasto-duodenal vein. At NF stage 42 blood vessels penetrate into the crevices between the pancreatic acini making them more conspicuous. // Pancreatic tissue composed of acinar epithelial cells and ductal epithelium that manufacture the proteolytic enzymes and bicarbonate required for digestion." [ISBN:0815318960, ISBN:0881679860, Wikipedia:Pancreas, ZFA:0001249, ZFIN:curator]
subset: uberon_slim
synonym: "Pancreas" EXACT []
xref: BTO:0000988
xref: EFO:0000855 ! pancreas
xref: EHDAA:6893 ! pancreas
xref: FMA:7198 ! Pancreas
xref: GAID:334 ! pancreas
xref: HOG:0000050 ! pancreas
xref: MA:0000120 ! pancreas
xref: MAT:0000075 ! pancreas
xref: MIAA:0000075 ! pancreas
xref: ncithesaurus:Pancreas
xref: OpenCyc:Mx4rvVimZZwpEbGdrcN5Y29ycA
xref: TAO:0000140 ! pancreas
xref: XAO:0000136 ! pancreas
xref: ZFA:0000140 ! pancreas
is_a: UBERON:0002075 ! viscus
relationship: develops_from UBERON:0000925 ! endoderm
relationship: part_of UBERON:0000949 ! endocrine system

[Term]
id: UBERON:0001265
name: trabecula of spleen
alt_id: UBERON:FMA_16027-MA_0000758
comment: This class was created automatically from a combination of ontologies
synonym: "spleen trabeculum" EXACT []
synonym: "Splenic trabecula" EXACT []
synonym: "splenic trabecula" EXACT []
synonym: "Trabecula of spleen" EXACT []
xref: FMA:16027 ! Trabecula of spleen
xref: MA:0000758 ! spleen trabeculum
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0002106 ! spleen
xref: ncithesaurus:Splenic_Trabecula ! Splenic Trabecula

[Term]
id: UBERON:0001266
name: splenic cord
alt_id: UBERON:FMA_16031-MA_0002671
comment: This class was created automatically from a combination of ontologies
synonym: "Cord of Bilroth" EXACT []
synonym: "cord of bilroth" EXACT []
synonym: "Splenic cord" EXACT []
xref: FMA:16031 ! Splenic cord
xref: MA:0002671 ! splenic cord
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001250 ! red pulp of spleen
xref: ncithesaurus:Splenic_Cord ! Splenic Cord

[Term]
id: UBERON:0001267
name: femoral nerve
alt_id: UBERON:FMA_16486-MA_0001167
def: "." [Wikipedia:Femoral_nerve]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Anterior crural nerve" EXACT []
synonym: "anterior crural nerve" EXACT []
synonym: "Femoral nerve" EXACT []
xref: EHDAA:5655 ! femoral nerve
xref: FMA:16486 ! Femoral nerve
xref: GAID:850 ! femoral nerve
xref: HOG:0001411 ! femoral nerve
xref: MA:0001167 ! femoral nerve
is_a: UBERON:0002003 ! peripheral nerve
relationship: part_of UBERON:0000978 ! leg
xref: ncithesaurus:Femoral_Nerve ! Femoral Nerve

[Term]
id: UBERON:0001268
name: peritoneal fluid
alt_id: UBERON:FMA_16515-MA_0002531
def: "Transudate contained in the peritoneal cavity." [Wikipedia:Peritoneal_fluid]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Peritoneal fluid" EXACT []
xref: FMA:16515 ! Peritoneal fluid
xref: MA:0002531 ! peritoneal fluid
is_a: UBERON:0000463 ! portion of organism substance
xref: BTO:0001031 ! peritoneal fluid
relationship: contained_in UBERON:0001179 ! peritoneal cavity

[Term]
id: UBERON:0001269
name: acetabular part of hip bone
alt_id: UBERON:FMA_16579-MA_0001335
def: "." [Wikipedia:Acetabulum]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Acetabular part of hip bone" EXACT []
synonym: "acetabulum" EXACT []
xref: AAO:0000770 ! acetabulum
xref: FMA:16579 ! Acetabular part of hip bone
xref: GAID:206 ! acetabulum
xref: MA:0001335 ! acetabulum
is_a: UBERON:0001271 ! pelvic girdle
relationship: part_of UBERON:0001486 ! hip joint
xref: ncithesaurus:Acetabulum ! Acetabulum

[Term]
id: UBERON:0001270
name: bony pelvis
alt_id: UBERON:FMA_16580-MA_0000532
comment: This class was created automatically from a combination of ontologies
synonym: "Bony pelvis" EXACT []
synonym: "pelvis bone" EXACT []
xref: FMA:16580 ! Bony pelvis
xref: MA:0000532 ! pelvis bone
is_obsolete: true

[Term]
id: UBERON:0001271
name: pelvic girdle
alt_id: UBERON:FMA_16581-MA_0000293-MIAA_0000182-XAO_0003064-ZFA_0000565
def: "Subdivision of free lower limb, which is the proximal segment of a lower limb and links the free lower limb to the trunk; it is demarcated by the plane of the surface of the acetabular fossa from the free lower limb; together with the free lower limb, it constitutes the lower limb. Examples: There are only two instances, right and left pelvic girdles. // Arched skeletal structure that supports the hind limbs, begins to develop at NF stage 50, and is ossified by NF stage 66." [ISBN:0471209627, NLM:pelvic+girdle, Wikipedia:Pelvic_girdle]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "girdle - pelvic" EXACT []
synonym: "Pelvic girdle" EXACT []
synonym: "pelvic girdle bone" EXACT []
xref: AAO:0000426 ! pelvic_girdle
xref: EHDAA:7149 ! pelvic girdle
xref: EHDAA:8324 ! pelvic girdle
xref: FMA:16581 ! Pelvic girdle
xref: HOG:0000305 ! pelvic girdle
xref: MA:0000293 ! pelvic girdle bone
xref: MAT:0000182 ! girdle - pelvic
xref: MIAA:0000182 ! girdle - pelvic
xref: TAO:0000565 ! pelvic girdle
xref: XAO:0003064 ! pelvic girdle
xref: ZFA:0000565 ! pelvic girdle
is_a: UBERON:0000477 ! anatomical cluster
is_a: UBERON:0002529 ! limb segment
relationship: part_of UBERON:0002103 ! hindlimb
xref: ncithesaurus:Pelvic_Girdle ! Pelvic Girdle

[Term]
id: UBERON:0001272
name: hip bone
alt_id: UBERON:FMA_16585-ZFA_0000623
def: "." [Wikipedia:Hip_bone]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "basipterygium" EXACT []
synonym: "Bone of pelvic girdle" EXACT []
synonym: "bone of pelvic girdle" EXACT []
synonym: "Coxal bone" EXACT []
synonym: "coxal bone" EXACT []
synonym: "Hip bone" EXACT []
synonym: "Innominate bone" EXACT []
synonym: "innominate bone" EXACT []
synonym: "Pelvic bone" EXACT []
synonym: "pelvic bone" RELATED []
xref: FMA:16585 ! Hip bone
xref: GAID:205 ! pelvic bone
xref: MA:0000655 ! hip bone
xref: OpenCyc:Mx4rvVjcrZwpEbGdrcN5Y29ycA
xref: TAO:0000623 ! basipterygium
xref: ZFA:0000623 ! basipterygium
intersection_of: UBERON:0001474 ! bone
intersection_of: part_of UBERON:0001464 ! hip
relationship: part_of UBERON:0001464 ! hip
xref: ncithesaurus:Pelvic_Bone ! Pelvic Bone

[Term]
id: UBERON:0001273
name: ilium
alt_id: UBERON:FMA_16589-MA_0001336
def: "." [Wikipedia:Ilium]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Ilium" EXACT []
synonym: "Os iliacum" EXACT []
synonym: "os iliacum" EXACT []
synonym: "Os ilii" EXACT []
synonym: "os ilii" EXACT []
xref: AAO:0000772 ! ilium
xref: FMA:16589 ! Ilium
xref: GAID:207 ! ilium
xref: galen:Ilium
xref: MA:0001336 ! ilium
is_a: UBERON:0001271 ! pelvic girdle
relationship: part_of UBERON:0001272 ! hip bone
xref: ncithesaurus:Ilium ! Ilium

[Term]
id: UBERON:0001274
name: ischium
alt_id: UBERON:FMA_16592-MA_0001337
def: "." [Wikipedia:Ischium]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Ischium" EXACT []
xref: AAO:0000860 ! ischium
xref: FMA:16592 ! Ischium
xref: GAID:208 ! ischium
xref: galen:Ischium
xref: MA:0001337 ! ischium
is_a: UBERON:0001271 ! pelvic girdle
xref: ncithesaurus:Ischium ! Ischium

[Term]
id: UBERON:0001275
name: pubis
alt_id: UBERON:FMA_16595-MA_0001338
def: "." [Wikipedia:Pubis]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Pubis" EXACT []
xref: AAO:0000861 ! pubis
xref: FMA:16595 ! Pubis
xref: MA:0001338 ! pubis
is_a: UBERON:0001271 ! pelvic girdle
relationship: part_of UBERON:0001272 ! hip bone

[Term]
id: UBERON:0001276
name: epithelium of stomach
alt_id: UBERON:FMA_17091-MA_0001610
comment: This class was created automatically from a combination of ontologies
synonym: "Epithelium of stomach" EXACT []
synonym: "Gastric epithelium" EXACT []
synonym: "gastric epithelium" RELATED []
synonym: "stomach epithelium" EXACT []
xref: BTO:0000500
xref: FMA:17091 ! Epithelium of stomach
xref: MA:0001610 ! stomach epithelium
is_a: UBERON:0000485 ! simple columnar epithelium
intersection_of: UBERON:0000483 ! epithelium
intersection_of: part_of UBERON:0000945 ! stomach
relationship: part_of UBERON:0001199 ! mucosa of stomach
xref: HOG:0001433 ! stomach epithelium

[Term]
id: UBERON:0001277
name: intestinal epithelium
alt_id: UBERON:FMA_17229-ZFA_0005124
def: "Simple columnar epithelium that lines the intestine, sometimes pseudostratified, with absorptive brush-border cells and mucous goblet cells clearly visible. <a href='ZFIN_jump?record=ZDB-PUB-050209-3'>Crosnier et al. 2005</a>" [Wikipedia:Intestinal_epithelium, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Intestinal epithelium" EXACT []
synonym: "intestine epithelium" RELATED []
xref: BTO:0000781
xref: FMA:17229 ! Intestinal epithelium
xref: MA:0001536 ! intestine epithelium
xref: TAO:0005124 ! intestinal epithelium
xref: ZFA:0005124 ! intestinal epithelium
is_a: UBERON:0000485 ! simple columnar epithelium
intersection_of: UBERON:0000483 ! epithelium
intersection_of: part_of UBERON:0000160 ! intestine
relationship: part_of UBERON:0001242 ! intestinal mucosa
xref: ncithesaurus:Intestinal_Epithelium ! Intestinal Epithelium

[Term]
id: UBERON:0001278
name: epithelium of large intestine
alt_id: UBERON:FMA_17301-MA_0001545
comment: This class was created automatically from a combination of ontologies
synonym: "Epithelium of large intestine" EXACT []
synonym: "Large intestinal epithelium" EXACT []
synonym: "large intestinal epithelium" EXACT []
synonym: "large intestine epithelium" EXACT []
xref: FMA:17301 ! Epithelium of large intestine
xref: MA:0001545 ! large intestine epithelium
is_a: UBERON:0001277 ! intestinal epithelium
intersection_of: UBERON:0000483 ! epithelium
intersection_of: part_of UBERON:0000059 ! large intestine
relationship: part_of UBERON:0001207 ! mucosa of large intestine

[Term]
id: UBERON:0001279
name: portal triad
alt_id: UBERON:FMA_17523-MA_0002499
def: "." [Wikipedia:Portal_triad]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Portal triad" EXACT []
synonym: "Trias hepatica" EXACT []
synonym: "trias hepatica" EXACT []
xref: FMA:17523 ! Portal triad
xref: MA:0002499 ! portal triad
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001172 ! hepatic acinus
xref: ncithesaurus:Portal_Triad ! Portal Triad

[Term]
id: UBERON:0001280
name: liver parenchyma
alt_id: UBERON:FMA_17540-MA_0000366
comment: This class was created automatically from a combination of ontologies
synonym: "Hepatic parenchyma" EXACT []
synonym: "hepatic parenchyma" RELATED []
synonym: "Liver parenchyma" EXACT []
synonym: "Parenchyma of liver" EXACT []
synonym: "parenchyma of liver" EXACT []
xref: FMA:17540 ! Liver parenchyma
xref: HOG:0000539 ! liver parenchyma
xref: MA:0000366 ! liver parenchyma
is_a: UBERON:0000064 ! organ part
intersection_of: UBERON:0000353 ! parenchyma
intersection_of: OBO_REL:part_of UBERON:0002107 ! liver
relationship: part_of UBERON:0002107 ! liver

[Term]
id: UBERON:0001281
name: hepatic sinusoid
alt_id: UBERON:FMA_17543-MA_0000367-ZFA_0005091
def: "Wide thin-walled blood vessels in the liver. In mammals they have neither veinous or arterial markers." [Wikipedia:Hepatic_sinusoid, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Hepatic sinusoid" EXACT []
synonym: "hepatic sinusoids" RELATED []
synonym: "liver sinusoid" EXACT []
synonym: "Vas capillare sinusoideum" EXACT []
synonym: "vas capillare sinusoideum" EXACT []
xref: EHDAA:2199 ! hepatic sinusoids
xref: EHDAA:3997 ! hepatic sinusoids
xref: EHDAA:4003 ! hepatic sinusoids
xref: EHDAA:6992 ! hepatic sinusoids
xref: EHDAA:8084 ! hepatic sinusoids
xref: FMA:17543 ! Hepatic sinusoid
xref: HOG:0000708 ! hepatic sinusoid
xref: MA:0000367 ! liver sinusoid
xref: TAO:0005091 ! hepatic sinusoid
xref: ZFA:0005091 ! hepatic sinusoid
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0002201 ! vasculature of trunk
xref: ncithesaurus:Hepatic_Sinusoid ! Hepatic Sinusoid

[Term]
id: UBERON:0001282
name: intralobular bile duct
alt_id: UBERON:FMA_17545-MA_0002669
def: "." [Wikipedia:Cholangiole]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "canal of hering" RELATED []
synonym: "Canal of Herring" EXACT []
synonym: "canal of herring" RELATED []
synonym: "Cholangiole" EXACT []
synonym: "cholangiole" EXACT []
synonym: "Intralobular bile duct" EXACT []
xref: FMA:17545 ! Intralobular bile duct
xref: MA:0002669 ! intralobular bile duct
is_a: UBERON:0002394 ! bile duct
relationship: part_of UBERON:0000477 ! anatomical cluster

[Term]
id: UBERON:0001283
name: bile canaliculus
alt_id: UBERON:FMA_17547-MA_0002495
def: "." [Wikipedia:Bile_canaliculus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Bile canaliculus" EXACT []
xref: FMA:17547 ! Bile canaliculus
xref: MA:0002495 ! bile canaliculus
is_a: UBERON:0000464 ! anatomical space
relationship: part_of UBERON:0001113 ! lobe of liver
xref: ZFA:0005163 ! bile canaliculus
xref: ncithesaurus:Bile_Canaliculus ! Bile Canaliculus
xref: BTO:0002841 ! bile canaliculus

[Term]
id: UBERON:0001284
name: renal column
alt_id: UBERON:FMA_17633-MA_0001651
def: "." [Wikipedia:Renal_column]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Renal column" EXACT []
synonym: "Renal column of Bertini" EXACT []
synonym: "renal column of bertini" EXACT []
xref: FMA:17633 ! Renal column
xref: MA:0001651 ! renal column
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0002189 ! outer cortex of kidney

[Term]
id: UBERON:0001285
name: nephron
alt_id: UBERON:FMA_17640-MA_0000375-XAO_0000145
def: "The basic functional unit of the kidney. its chief function is to regulate the concentration of water and soluble substances like sodium salts by filtering the blood, reabsorbing what is needed and excreting the rest as urine. A nephron eliminates wastes from the body, regulates blood volume and blood pressure, controls levels of electrolytes and metabolites, and regulates blood pH. Its functions are vital to life and are regulated by the endocrine system by hormones such as antidiuretic hormone, aldosterone, and parathyroid hormone.[WP]" [PMID:9268568, Wikipedia:Nephron]
subset: uberon_slim
synonym: "Nephron" EXACT []
xref: BTO:0000924
xref: FMA:17640 ! Nephron
xref: GAID:428 ! nephron
xref: MA:0000375 ! nephron
xref: XAO:0000145
is_a: UBERON:0000064 ! organ part
relationship: develops_from UBERON:0003220 ! metanephric blastema
relationship: part_of UBERON:0002113 ! kidney
xref: ncithesaurus:Nephron ! Nephron

[Term]
id: UBERON:0001286
name: bowman's space
alt_id: UBERON:FMA_17676-MA_0001664
def: "." [Wikipedia:Bowman's_space]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Bowman's space" EXACT []
synonym: "Urinary space" EXACT []
synonym: "urinary space" EXACT []
xref: FMA:17676 ! Bowman's space
xref: MA:0001664 ! urinary space
is_a: UBERON:0000464 ! anatomical space
relationship: part_of UBERON:0001230 ! glomerular capsule
xref: ncithesaurus:Urinary_Space ! Urinary Space

[Term]
id: UBERON:0001287
name: proximal convoluted tubule
alt_id: UBERON:FMA_17693-MA_0001669-ZFA_0001620
def: "Most anterior portion of the pronephric duct (or tubule as described by Wingert et al, 2007). <a href='http://zfin.org/cgi-bin/ZFIN_jump?record=ZDB-PUB-071029-9'>Wingert, 2007.</a>" [Wikipedia:Proximal_convoluted_tubule, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "first convoluted tubule" RELATED []
synonym: "PCT" RELATED []
synonym: "Proximal convoluted renal tubule" EXACT []
synonym: "proximal convoluted renal tubule" EXACT []
synonym: "Proximal convoluted tubule" EXACT []
synonym: "Tubulus contortus proximalis" EXACT []
synonym: "tubulus contortus proximalis" EXACT []
xref: FMA:17693 ! Proximal convoluted tubule
xref: MA:0001669 ! proximal convoluted tubule
xref: ZFA:0001620 ! proximal convoluted tubule
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001225 ! cortex of kidney
relationship: part_of UBERON:0001231 ! renal tubule

[Term]
id: UBERON:0001288
name: loop of Henle
alt_id: UBERON:FMA_17698-MA_0001675
def: "Portion of the nephron that leads from the proximal convoluted tubule to the distal convoluted tubule. The loop has a hairpin bend in the renal medulla. The main function of this structure is to create a concentration gradient in the medulla of the kidney. By means of a countercurrent multiplier system, which utilizes sodium pumps, it creates an area of high sodium concentration deep in the medulla, near the collecting duct. Water present in the filtrate in the collecting duct flows through aquaporin channels out of the collecting duct, moving passively down its concentration gradient. This process reabsorbs water and creates a concentrated urine for excretion[WP]." [Wikipedia:Loop_of_henle]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Henle loop" EXACT []
synonym: "henle's loop" EXACT []
synonym: "Loop of Henle" EXACT []
xref: FMA:17698 ! Loop of Henle
xref: GAID:437 ! loop of henle
xref: HOG:0001270 ! loop of Henle
xref: MA:0001675 ! loop of henle
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001231 ! renal tubule
xref: ncithesaurus:Loop_of_Henle ! Henle's Loop

[Term]
id: UBERON:0001289
name: descending limb of loop of Henle
alt_id: UBERON:FMA_17705-MA_0001679
def: "Portion of the renal tubule constituting the first part of the loop of Henle[WP]." [Wikipedia:Descending_limb_of_loop_of_henle]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Descending limb of Henle's loop" EXACT []
synonym: "descending limb of henle's loop" EXACT []
synonym: "Descending limb of loop of Henle" EXACT []
synonym: "loop of henle descending limb" EXACT []
xref: FMA:17705 ! Descending limb of loop of Henle
xref: MA:0001679 ! loop of henle descending limb
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001288 ! loop of Henle
relationship: part_of UBERON:0003060 ! pronephric duct
xref: ncithesaurus:Descending_Limb_of_the_Henle_s_Loop ! Descending Limb of Henle's Loop

[Term]
id: UBERON:0001290
name: proximal straight tubule
alt_id: UBERON:FMA_17716-MA_0002614-ZFA_0001621
def: "Portion of the pronephric duct (or tubule as described by Wingert et al, 2007) which is just posterior to the proximal convoluted tubule. <a href='http://zfin.org/cgi-bin/ZFIN_jump?record=ZDB-PUB-071029-9'>Wingert, 2007.</a>" [Wikipedia:Proximal_straight_tubule, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "pars recta" RELATED []
synonym: "Proximal straight tubule" EXACT []
synonym: "proximal tubule segment 3" RELATED []
synonym: "Thick descending limb of proximal tubule" EXACT []
synonym: "thick descending limb of proximal tubule" EXACT []
synonym: "Tubulus rectus proximalis" EXACT []
synonym: "tubulus rectus proximalis" EXACT []
xref: FMA:17716 ! Proximal straight tubule
xref: MA:0002614 ! proximal straight tubule
xref: ZFA:0001621 ! proximal straight tubule
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001225 ! cortex of kidney
relationship: part_of UBERON:0001289 ! descending limb of loop of Henle

[Term]
id: UBERON:0001291
name: ascending limb of loop of Henle
alt_id: UBERON:FMA_17717-MA_0001676
def: "a segment of the nephron in the kidney. It can be divided into two parts: that in the renal medulla, and that in the renal cortex[Wikipedia:Thick_ascending_limb_of_loop_of_Henle]. sub-portion of the loop of Henle in the nephron of the kidney. As filtrate passes back up it, the concentration of the surrounding medulla decreases. The thin ascending limb is not permeable to water, but it is permeable to ions[Wikipedia:Thin_ascending_limb_of_loop_of_Henle]." [Wikipedia:Ascending_limb_of_loop_of_Henle]
comment: TODO: thick/thin check
subset: uberon_slim
synonym: "Ascending limb of Henle's loop" EXACT []
synonym: "ascending limb of henle's loop" EXACT []
synonym: "Ascending limb of loop of Henle" EXACT []
synonym: "distal straight tubule" NARROW []
synonym: "loop of henle ascending limb" EXACT []
synonym: "Thick ascending limb of Henle's loop" NARROW []
xref: FMA:17717 ! Ascending limb of loop of Henle
xref: MA:0001676 ! loop of henle ascending limb
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001288 ! loop of Henle
xref: ncithesaurus:Ascending_Limb_of_the_Henle_s_Loop ! Ascending Limb of Henle's Loop

[Term]
id: UBERON:0001292
name: distal convoluted tubule
alt_id: UBERON:FMA_17721-MA_0001666
def: "a portion of kidney nephron between the loop of Henle and the collecting duct system." [Wikipedia:Distal_convoluted_tubule]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Distal convoluted renal tubule" EXACT []
synonym: "distal convoluted renal tubule" EXACT []
synonym: "Distal convoluted tubule" EXACT []
synonym: "second convoluted tubule" RELATED []
synonym: "Tubulus contortus distalis" EXACT []
synonym: "tubulus contortus distalis" EXACT []
xref: FMA:17721 ! Distal convoluted tubule
xref: MA:0001666 ! distal convoluted tubule
is_a: UBERON:0000064 ! organ part
relationship: develops_from UBERON:0003220 ! metanephric blastema
relationship: part_of UBERON:0001225 ! cortex of kidney
relationship: part_of UBERON:0001231 ! renal tubule
xref: ncithesaurus:Distal_Convoluted_Tubule ! Distal Convoluted Tubule

[Term]
id: UBERON:0001293
name: outer medulla of kidney
alt_id: UBERON:FMA_17733-MA_0001653
comment: This class was created automatically from a combination of ontologies
synonym: "Outer medulla of kidney" EXACT []
synonym: "Outer renal medulla" EXACT []
synonym: "outer renal medulla" EXACT []
synonym: "Outer zone of medulla of kidney" EXACT []
synonym: "outer zone of medulla of kidney" EXACT []
synonym: "Outer zone of renal medulla" EXACT []
synonym: "outer zone of renal medulla" EXACT []
xref: FMA:17733 ! Set of outer region of renal pyramids
xref: MA:0001653 ! outer renal medulla
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0002113 ! kidney

[Term]
id: UBERON:0001294
name: inner medulla of kidney
alt_id: UBERON:FMA_17734-MA_0001652
comment: This class was created automatically from a combination of ontologies
synonym: "Inner medulla of kidney" EXACT []
synonym: "Inner renal medulla" EXACT []
synonym: "inner renal medulla" EXACT []
synonym: "Inner zone of medulla of kidney" EXACT []
synonym: "inner zone of medulla of kidney" EXACT []
synonym: "Inner zone of renal medulla" EXACT []
synonym: "inner zone of renal medulla" EXACT []
xref: FMA:17734 ! Set of inner region of renal pyramids
xref: MA:0001652 ! inner renal medulla
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0002113 ! kidney

[Term]
id: UBERON:0001295
name: endometrium
alt_id: UBERON:FMA_17742-MA_0000390-MIAA_0000319
def: "." [Wikipedia:Endometrium]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Endometrium" EXACT []
synonym: "Tunica mucosa (Endometrium)" EXACT []
synonym: "tunica mucosa (endometrium)" EXACT []
xref: FMA:17742 ! Endometrium
xref: GAID:377 ! endometrium
xref: HOG:0001285 ! endometrium
xref: MA:0000390 ! endometrium
xref: MAT:0000319 ! endometrium
xref: MIAA:0000319 ! endometrium
xref: ncithesaurus:Endometrium
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0000995 ! uterus

[Term]
id: UBERON:0001296
name: myometrium
alt_id: UBERON:FMA_17743-MA_0000391
def: "middle layer of the uterine wall consisting of smooth muscle cells and supporting stromal and vascular tissue." [http://en.wikipedia.org/wiki/Myometrium, Wikipedia:Myometrium]
comment: The inner layer of the uterine wall is the endometrium or uterine lining, and the outer layer the serosa or perimetrium. The myometrium stretches (the smooth muscle cells expand in both size and number[1]) during pregnancy to allow for the harboring of the pregnancy, and contracts in a coordinated fashion during the process of labor. After delivery the myometrium contracts to expel the placenta and reduce blood loss.
subset: uberon_slim
synonym: "Myometrium" EXACT []
synonym: "Tunica muscularis (Myometrium)" EXACT []
synonym: "tunica muscularis (myometrium)" EXACT []
synonym: "uterine smooth muscle" RELATED []
xref: BTO:0000907
xref: FMA:17743 ! Myometrium
xref: GAID:171 ! myometrium
xref: HOG:0001281 ! myometrium
xref: MA:0000391 ! myometrium
xref: MeSH:D009215
xref: ncithesaurus:Myometrium
is_a: UBERON:0001135 ! smooth muscle tissue
relationship: part_of UBERON:0000995 ! uterus
relationship: surrounded_by UBERON:0001297 ! serosa of uterus
relationship: surrounds UBERON:0001295 ! endometrium

[Term]
id: UBERON:0001298
name: psoas major
alt_id: UBERON:FMA_18060-MA_0002358
def: "." [Wikipedia:Psoas_major]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Psoas major" EXACT []
synonym: "Psoas major muscle" EXACT []
synonym: "psoas major muscle" EXACT []
xref: FMA:18060 ! Psoas major
xref: MA:0002358 ! psoas major
is_a: UBERON:0001630 ! muscle organ
relationship: part_of UBERON:0000475 ! organism subdivision
xref: ncithesaurus:Psoas_Major ! Psoas Major
xref: BTO:0001877 ! psoas major

[Term]
id: UBERON:0001299
name: glans penis
alt_id: UBERON:FMA_18247-MA_0002726
def: "." [Wikipedia:Glans_penis]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Glans penis" EXACT []
xref: FMA:18247 ! Glans penis
xref: GAID:0000012 ! glans penis
xref: HOG:0001475 ! glans penis
xref: MA:0002726 ! glans penis
xref: ncithesaurus:Glans_Penis
xref: OpenCyc:Mx4rvdCpE5wpEbGdrcN5Y29ycA
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0000989 ! penis
xref: BTO:0003118 ! glans penis

[Term]
id: UBERON:0001300
name: scrotum
alt_id: UBERON:FMA_18252-MA_0000409
def: "." [Wikipedia:Scrotum]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Scrotum" EXACT []
xref: FMA:18252 ! Scrotum
xref: GAID:393 ! scrotum
xref: MA:0000409 ! scrotum
is_a: UBERON:0000475 ! organism subdivision
xref: ncithesaurus:Scrotum ! Scrotum
xref: BTO:0003098 ! scrotum

[Term]
id: UBERON:0001301
name: epididymis
alt_id: UBERON:FMA_18255-MA_0000397-MIAA_0000130
def: "A narrow, tightly-coiled tube connecting the efferent ducts from the rear of each testicle to its vas deferens." [Wikipedia:Epididymis]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Epididymis" EXACT []
synonym: "epididymus" EXACT []
xref: BTO:0000408
xref: FMA:18255 ! Epididymis
xref: GAID:397 ! epididymis
xref: galen:Epididymis
xref: HOG:0001265 ! epididymis
xref: MA:0000397 ! epididymis
xref: MAT:0000130 ! epididymus
xref: MIAA:0000130 ! epididymus
xref: ncithesaurus:Epididymis
is_a: UBERON:0000058 ! duct
relationship: part_of UBERON:0000473 ! testis

[Term]
id: UBERON:0001302
name: right uterine tube
alt_id: UBERON:FMA_18483-MA_0001717
comment: This class was created automatically from a combination of ontologies
synonym: "Right fallopian tube" EXACT []
synonym: "right fallopian tube" EXACT []
synonym: "Right oviduct" EXACT []
synonym: "right oviduct" EXACT []
synonym: "Right uterine tube" EXACT []
xref: FMA:18483 ! Right uterine tube
xref: MA:0001717 ! right oviduct
is_a: UBERON:0003889 ! oviduct
xref: ncithesaurus:Right_Fallopian_Tube ! Right Fallopian Tube

[Term]
id: UBERON:0001303
name: left uterine tube
alt_id: UBERON:FMA_18484-MA_0001716
comment: This class was created automatically from a combination of ontologies
synonym: "Left fallopian tube" EXACT []
synonym: "left fallopian tube" EXACT []
synonym: "Left oviduct" EXACT []
synonym: "left oviduct" EXACT []
synonym: "Left uterine tube" EXACT []
xref: FMA:18484 ! Left uterine tube
xref: MA:0001716 ! left oviduct
is_a: UBERON:0003889 ! oviduct
xref: ncithesaurus:Left_Fallopian_Tube ! Left Fallopian Tube

[Term]
id: UBERON:0001304
name: germinal epithelium of ovary
alt_id: UBERON:FMA_18629-MA_0001711
comment: This class was created automatically from a combination of ontologies
synonym: "Epithelium superficiale (Ovarium)" EXACT []
synonym: "epithelium superficiale (ovarium)" EXACT []
synonym: "Germinal epithelium of ovary" EXACT []
synonym: "ovary germinal epithelium" EXACT []
xref: FMA:18629 ! Germinal epithelium of ovary
xref: HOG:0000630 ! ovary germinal epithelium
xref: MA:0001711 ! ovary germinal epithelium
is_a: UBERON:0000484 ! simple cuboidal epithelium
relationship: part_of UBERON:0001307 ! capsule of ovary

[Term]
id: UBERON:0001305
name: follicle of ovary
alt_id: UBERON:FMA_18640-MA_0001707-ZFA_0001110
def: "Oocyte development of zebrafish has been divided into five stages based on morphological criteria and on physiological and biochemical events. Stage I follicles (less than 140 microns) are primary growth stage, stage II follicles (140-340 microns) are cortical alveolus stage, stage III (340-690 microns) are vitellogenesis, stage IV (690-730 microns) are oocyte maturation, and stage V follicles are matured egg.<a href='http://zfin.org/cgi-bin/ZFIN_jump?record=ZDB-PUB-961014-1020'>Selman et al, 1993.</a>" [Wikipedia:Ovarian_follicle, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "egg follicle" RELATED []
synonym: "Follicle of ovary" EXACT []
synonym: "Follicle of ovary viewed macroscopically" EXACT []
synonym: "follicle of ovary viewed macroscopically" EXACT []
synonym: "Ovarian follicle" EXACT []
synonym: "ovarian follicle" EXACT []
synonym: "Ovary follicle" EXACT []
synonym: "ovary follicle" EXACT []
xref: BTO:0000475
xref: FMA:18640 ! Follicle of ovary
xref: GAID:371 ! ovarian follicle
xref: HOG:0001536 ! ovary follicle
xref: MA:0001707 ! ovary follicle
xref: MAT:0000449 ! ovarian follicle
xref: TAO:0001110 ! ovarian follicle
xref: ZFA:0001110 ! ovarian follicle
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0000992 ! ovary
xref: ncithesaurus:Ovarian_Follicle ! Ovarian Follicle

[Term]
id: UBERON:0001306
name: cumulus oophorus
alt_id: UBERON:FMA_18659-MA_0002414
def: "." [Wikipedia:Cumulus_oophorus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Cumulus oophorus" EXACT []
synonym: "Cumulus ovaricus" EXACT []
synonym: "cumulus ovaricus" EXACT []
xref: FMA:18659 ! Cumulus oophorus
xref: MA:0002414 ! cumulus oophorus
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001305 ! follicle of ovary

[Term]
id: UBERON:0001307
name: capsule of ovary
alt_id: UBERON:FMA_18662-MA_0001706
comment: This class was created automatically from a combination of ontologies
synonym: "Capsule of ovary" EXACT []
synonym: "Ovarian capsule" EXACT []
synonym: "ovarian capsule" EXACT []
synonym: "Ovary capsule" EXACT []
synonym: "ovary capsule" EXACT []
xref: FMA:18662 ! Capsule of ovary
xref: MA:0001706 ! ovary capsule
is_a: UBERON:0003893 ! capsule
relationship: part_of UBERON:0000992 ! ovary
xref: ncithesaurus:Ovarian_Capsule ! Ovarian Capsule

[Term]
id: UBERON:0001308
name: external iliac artery
alt_id: UBERON:FMA_18805-MA_0001973
def: "." [Wikipedia:External_iliac_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "External iliac artery" EXACT []
xref: FMA:18805 ! External iliac artery
xref: galen:ExternalIliacArtery
xref: MA:0001973 ! external iliac artery
is_a: UBERON:0001637 ! artery
relationship: part_of UBERON:0001191 ! common iliac artery
xref: ncithesaurus:External_Iliac_Artery ! External Iliac Artery

[Term]
id: UBERON:0001309
name: internal iliac artery
alt_id: UBERON:FMA_18808-MA_0001974
def: "." [Wikipedia:Internal_iliac_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Internal iliac artery" EXACT []
xref: FMA:18808 ! Internal iliac artery
xref: galen:InternalIliacArtery
xref: MA:0001974 ! internal iliac artery
is_a: UBERON:0001637 ! artery
relationship: part_of UBERON:0001191 ! common iliac artery
xref: ncithesaurus:Internal_Iliac_Artery ! Internal Iliac Artery

[Term]
id: UBERON:0001310
name: umbilical artery
alt_id: UBERON:FMA_18820-MA_0002072
def: "." [Wikipedia:Umbilical_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Umbilical artery" EXACT []
xref: BTO:0000841
xref: EHDAA:1026 ! umbilical artery
xref: EHDAA:410 ! umbilical artery
xref: FMA:18820 ! Umbilical artery
xref: GAID:516 ! umbilical artery
xref: MA:0002072 ! umbilical artery
xref: OpenCyc:Mx4rCWdhMGWbEd2AAABQjYGu0g
is_a: UBERON:0001637 ! artery
xref: ncithesaurus:Umbilical_Artery ! Umbilical Artery

[Term]
id: UBERON:0001311
name: inferior vesical artery
alt_id: UBERON:FMA_18823-MA_0002079
def: "." [Wikipedia:Inferior_vesical_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Arteria vesicali inferior" EXACT []
synonym: "arteria vesicali inferior" EXACT []
synonym: "Inferior vesical artery" EXACT []
xref: FMA:18823 ! Inferior vesical artery
xref: MA:0002079 ! inferior vesical artery
is_a: UBERON:0001637 ! artery
xref: ncithesaurus:Inferior_Vesical_Artery ! Inferior Vesical Artery

[Term]
id: UBERON:0001312
name: superior vesical artery
alt_id: UBERON:FMA_18839-MA_0002080
def: "." [Wikipedia:Superior_vesical_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Arteria vesicalis superior" EXACT []
synonym: "arteria vesicalis superior" EXACT []
synonym: "Superior vesical artery" EXACT []
xref: FMA:18839 ! Superior vesical artery
xref: MA:0002080 ! superior vesical artery
is_a: UBERON:0001637 ! artery
xref: ncithesaurus:Superior_Vesical_Artery ! Superior Vesical Artery

[Term]
id: UBERON:0001313
name: iliolumbar artery
alt_id: UBERON:FMA_18845-MA_0001976
def: "." [Wikipedia:Iliolumbar_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "ilio-lumbar artery" EXACT []
synonym: "Iliolumbar artery" EXACT []
xref: FMA:18845 ! Iliolumbar artery
xref: MA:0001976 ! ilio-lumbar artery
is_a: UBERON:0001637 ! artery
xref: ncithesaurus:Iliolumbar_Artery ! Iliolumbar Artery

[Term]
id: UBERON:0001314
name: obturator artery
alt_id: UBERON:FMA_18865-MA_0002008
def: "." [Wikipedia:Obturator_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Obturator artery" EXACT []
xref: FMA:18865 ! Obturator artery
xref: MA:0002008 ! obturator artery
is_a: UBERON:0001637 ! artery
xref: ncithesaurus:Obturator_Artery ! Obturator Artery

[Term]
id: UBERON:0001315
name: superior gluteal artery
alt_id: UBERON:FMA_18868-MA_0002054
def: "." [Wikipedia:Superior_gluteal_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Arteria glutealis superior" EXACT []
synonym: "arteria glutealis superior" EXACT []
synonym: "Superior gluteal artery" EXACT []
xref: FMA:18868 ! Superior gluteal artery
xref: MA:0002054 ! superior gluteal artery
is_a: UBERON:0001637 ! artery
relationship: part_of UBERON:0001015 ! muscle system
xref: ncithesaurus:Gluteal_Artery ! Superior Gluteal Artery

[Term]
id: UBERON:0001316
name: external iliac vein
alt_id: UBERON:FMA_18883-MA_0002144
def: "." [Wikipedia:External_iliac_vein]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "External iliac vein" EXACT []
xref: FMA:18883 ! External iliac vein
xref: galen:ExternalIliacVein
xref: MA:0002144 ! external iliac vein
is_a: UBERON:0001638 ! vein
xref: ncithesaurus:External_Iliac_Vein ! External Iliac Vein

[Term]
id: UBERON:0001317
name: internal iliac vein
alt_id: UBERON:FMA_18884-MA_0002145
def: "." [Wikipedia:Internal_iliac_vein]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Internal iliac vein" EXACT []
xref: FMA:18884 ! Internal iliac vein
xref: galen:InternalIliacVein
xref: HOG:0000749 ! internal iliac vein
xref: MA:0002145 ! internal iliac vein
is_a: UBERON:0001638 ! vein
xref: ncithesaurus:Internal_Iliac_Vein ! Internal Iliac Vein

[Term]
id: UBERON:0001318
name: inferior vesical vein
alt_id: UBERON:FMA_18890-MA_0002264
comment: This class was created automatically from a combination of ontologies
synonym: "Inferior vesical vein" EXACT []
xref: FMA:18890 ! Inferior vesical vein
xref: MA:0002264 ! inferior vesical vein
is_a: UBERON:0002460 ! vesical vein

[Term]
id: UBERON:0001319
name: vaginal vein
alt_id: UBERON:FMA_18899-MA_0002251
def: "." [Wikipedia:Vaginal_vein]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Vaginal vein" EXACT []
xref: FMA:18899 ! Vaginal vein
xref: MA:0002251 ! vaginal vein
is_a: UBERON:0001638 ! vein
intersection_of: UBERON:0001638 ! vein
intersection_of: part_of UBERON:0000996 ! vagina

[Term]
id: UBERON:0001320
name: iliolumbar vein
alt_id: UBERON:FMA_18902-MA_0002146
def: "." [Wikipedia:Iliolumbar_vein]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "ilio-lumbar vein" EXACT []
synonym: "Iliolumbar vein" EXACT []
xref: FMA:18902 ! Iliolumbar vein
xref: MA:0002146 ! ilio-lumbar vein
is_a: UBERON:0001638 ! vein
xref: ncithesaurus:Iliolumbar_Vein ! Iliolumbar Vein

[Term]
id: UBERON:0001321
name: obturator vein
alt_id: UBERON:FMA_18914-MA_0002183
def: "." [Wikipedia:Obturator_vein]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Obturator vein" EXACT []
xref: FMA:18914 ! Obturator vein
xref: MA:0002183 ! obturator vein
is_a: UBERON:0001638 ! vein
xref: ncithesaurus:Obturator_Vein ! Obturator Vein

[Term]
id: UBERON:0001322
name: sciatic nerve
alt_id: UBERON:FMA_19034-MA_0001172
def: "." [Wikipedia:Sciatic_nerve]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Sciatic nerve" EXACT []
xref: BTO:0001221
xref: EHDAA:5659 ! sciatic nerve
xref: FMA:19034 ! Sciatic nerve
xref: GAID:852 ! sciatic nerve
xref: HOG:0000894 ! sciatic nerve
xref: MA:0001172 ! sciatic nerve
xref: NIF_GrossAnatomy:birnlex_1133 ! Sciatic nerve
xref: OpenCyc:Mx4rv7MlDJwpEbGdrcN5Y29ycA
is_a: UBERON:0002003 ! peripheral nerve
relationship: part_of UBERON:0000978 ! leg
relationship: part_of UBERON:0001815 ! lumbosacral nerve plexus
xref: ncithesaurus:Sciatic_Nerve ! Sciatic Nerve

[Term]
id: UBERON:0001323
name: tibial nerve
alt_id: UBERON:FMA_19035-MA_0001173
def: "." [Wikipedia:Tibial_nerve]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Medial popliteal nerve" EXACT []
synonym: "medial popliteal nerve" EXACT []
synonym: "Tibial nerve" EXACT []
xref: FMA:19035 ! Tibial nerve
xref: GAID:854 ! tibial nerve
xref: MA:0001173 ! tibial nerve
is_a: UBERON:0002003 ! peripheral nerve
relationship: part_of UBERON:0000978 ! leg
xref: ncithesaurus:Tibial_Nerve ! Tibial Nerve

[Term]
id: UBERON:0001324
name: common fibular nerve
alt_id: UBERON:FMA_19039-MA_0001169
def: "." [Wikipedia:Common_fibular_nerve]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Common fibular nerve" EXACT []
synonym: "Common peroneal nerve" EXACT []
synonym: "common peroneal nerve" EXACT []
synonym: "peroneal nerve" EXACT []
xref: FMA:19039 ! Common fibular nerve
xref: GAID:853 ! peroneal nerve
xref: MA:0001169 ! peroneal nerve
is_a: UBERON:0002003 ! peripheral nerve
relationship: part_of UBERON:0000978 ! leg
xref: ncithesaurus:Peroneal_Nerve ! Peroneal Nerve

[Term]
id: UBERON:0001325
name: muscle of pelvis
alt_id: UBERON:FMA_19086-MA_0000534
def: "Muscle (organ) which is a part of the pelvis. Examples: levator ani," []
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Muscle of pelvis" EXACT []
synonym: "Pelvic muscle" EXACT []
synonym: "pelvic muscle" EXACT []
synonym: "pelvis muscle" EXACT []
xref: FMA:19086 ! Muscle of pelvis
xref: MA:0000534 ! pelvis muscle
is_a: UBERON:0001774 ! muscle of trunk
intersection_of: UBERON:0001630 ! muscle organ
intersection_of: part_of UBERON:0002355 ! pelvis
relationship: part_of UBERON:0002355 ! pelvis

[Term]
id: UBERON:0001326
name: levator ani
alt_id: UBERON:FMA_19087-MA_0002332
def: "." [Wikipedia:Levator_ani]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Levator ani" EXACT []
xref: FMA:19087 ! Levator ani
xref: MA:0002332 ! levator ani
is_a: UBERON:0001325 ! muscle of pelvis
relationship: part_of UBERON:0000477 ! anatomical cluster
xref: ncithesaurus:Levator_Ani ! Levator Ani

[Term]
id: UBERON:0001327
name: coccygeus
alt_id: UBERON:FMA_19088-MA_0002277
def: "." [Wikipedia:Coccygeus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Coccygeus" EXACT []
synonym: "Ischiococcygeus" EXACT []
synonym: "ischiococcygeus" EXACT []
xref: FMA:19088 ! Coccygeus
xref: MA:0002277 ! coccygeus
is_a: UBERON:0001325 ! muscle of pelvis

[Term]
id: UBERON:0001328
name: lobe of prostate
alt_id: UBERON:FMA_19570-MA_0001738
comment: This class was created automatically from a combination of ontologies
synonym: "Lobe of prostate" EXACT []
synonym: "Lobe of prostate gland" EXACT []
synonym: "lobe of prostate gland" EXACT []
synonym: "prostate gland lobe" EXACT []
synonym: "Prostatic lobe" EXACT []
synonym: "prostatic lobe" EXACT []
xref: BTO:0000548
xref: FMA:19570 ! Lobe of prostate
xref: MA:0001738 ! prostate gland lobe
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0002367 ! prostate
xref: ncithesaurus:Prostate_Gland_Lobe ! Prostate Gland Lobe

[Term]
id: UBERON:0001329
name: anterior lobe of prostate
alt_id: UBERON:FMA_19574-MA_0002422
comment: This class was created automatically from a combination of ontologies
synonym: "Anterior lobe of prostate" EXACT []
synonym: "Anterior lobe of prostate gland" EXACT []
synonym: "anterior lobe of prostate gland" EXACT []
synonym: "Commissure of prostate" EXACT []
synonym: "commissure of prostate" EXACT []
synonym: "Isthmus of prostate" EXACT []
synonym: "isthmus of prostate" EXACT []
synonym: "Isthmus of prostate gland" EXACT []
synonym: "isthmus of prostate gland" EXACT []
synonym: "prostate gland anterior lobe" EXACT []
synonym: "Prostatic isthmus" EXACT []
synonym: "prostatic isthmus" EXACT []
xref: FMA:19574 ! Anterior lobe of prostate
xref: MA:0002422 ! prostate gland anterior lobe
is_a: UBERON:0001328 ! lobe of prostate
xref: BTO:0003158 ! prostate gland anterior lobe

[Term]
id: UBERON:0001330
name: pampiniform plexus
alt_id: UBERON:FMA_19607-MA_0001866
def: "." [Wikipedia:Pampiniform_plexus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Pampiniform plexus" EXACT []
synonym: "Pampiniform venous plexus" EXACT []
synonym: "pampiniform venous plexus" EXACT []
synonym: "Plexus of veins of fascia of prostate" EXACT []
synonym: "plexus of veins of fascia of prostate" EXACT []
synonym: "Venous plexus of fascia of prostate" EXACT []
synonym: "venous plexus of fascia of prostate" EXACT []
synonym: "Venous plexus of fascia of prostate gland" EXACT []
synonym: "venous plexus of fascia of prostate gland" EXACT []
xref: FMA:19607 ! Pampiniform plexus
xref: MA:0001866 ! pampiniform plexus
is_a: UBERON:0001593 ! venous plexus

[Term]
id: UBERON:0001331
name: skin of penis
alt_id: UBERON:FMA_19638-MA_0002727
comment: This class was created automatically from a combination of ontologies
synonym: "Penile skin" EXACT []
synonym: "penile skin" EXACT []
synonym: "penis skin" EXACT []
synonym: "Skin of penis" EXACT []
xref: FMA:19638 ! Skin of penis
xref: MA:0002727 ! penis skin
is_a: UBERON:0000014 ! zone of skin
intersection_of: UBERON:0000014 ! zone of skin
intersection_of: part_of UBERON:0000989 ! penis
relationship: continuous_with UBERON:0001085 ! skin of trunk
relationship: part_of UBERON:0000989 ! penis

[Term]
id: UBERON:0001332
name: prepuce of penis
alt_id: UBERON:FMA_19639-MA_0000407
def: "." [Wikipedia:Foreskin]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Foreskin" EXACT []
synonym: "foreskin" EXACT []
synonym: "Penile prepuce" EXACT []
synonym: "penile prepuce" EXACT []
synonym: "prepuce" EXACT []
synonym: "Prepuce of penis" EXACT []
xref: BTO:0001113
xref: FMA:19639 ! Prepuce of penis
xref: MA:0000407 ! prepuce
xref: ncithesaurus:Prepuce
xref: OpenCyc:Mx4rvVjlTZwpEbGdrcN5Y29ycA
is_a: UBERON:0000475 ! organism subdivision
relationship: part_of UBERON:0001331 ! skin of penis

[Term]
id: UBERON:0001333
name: male urethra
alt_id: UBERON:FMA_19668-MA_0002640
def: "." [Wikipedia:Male_urethra]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Male urethra" EXACT []
xref: FMA:19668 ! Male urethra
xref: MA:0002640 ! male urethra
is_a: UBERON:0000057 ! urethra
relationship: part_of UBERON:0003101 ! male organism
xref: ncithesaurus:Male_Urethra ! Male Urethra

[Term]
id: UBERON:0001334
name: female urethra
alt_id: UBERON:FMA_19669-MA_0002637
def: "." [Wikipedia:Female_urethra]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Female urethra" EXACT []
xref: FMA:19669 ! Female urethra
xref: MA:0002637 ! female urethra
is_a: UBERON:0000057 ! urethra
xref: ncithesaurus:Female_Urethra ! Female Urethra

[Term]
id: UBERON:0001335
name: prostatic urethra
alt_id: UBERON:FMA_19673-MA_0002646
def: "." [Wikipedia:Prostatic_urethra]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Prostatic part of urethra" EXACT []
synonym: "prostatic part of urethra" EXACT []
synonym: "Prostatic urethra" EXACT []
xref: FMA:19673 ! Prostatic urethra
xref: MA:0002646 ! prostatic urethra
is_a: UBERON:0000063 ! organ segment
relationship: part_of UBERON:0001333 ! male urethra
xref: ncithesaurus:Prostatic_Portion_of_the_Male_Urethra ! Prostatic Urethra
xref: BTO:0003163 ! prostatic urethra

[Term]
id: UBERON:0001336
name: membranous urethra
alt_id: UBERON:FMA_19674-MA_0002647
def: "." [Wikipedia:Membranous_urethra]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Intermediate part of urethra" EXACT []
synonym: "intermediate part of urethra" EXACT []
synonym: "Intermediate urethra" EXACT []
synonym: "intermediate urethra" EXACT []
synonym: "Membranous part of urethra" EXACT []
synonym: "membranous part of urethra" EXACT []
synonym: "Membranous urethra" EXACT []
synonym: "Pars membranacea (urethrae)" EXACT []
synonym: "pars membranacea (urethrae)" EXACT []
xref: FMA:19674 ! Membranous urethra
xref: MA:0002647 ! membranous urethra
is_a: UBERON:0000063 ! organ segment
relationship: part_of UBERON:0001008 ! urinary system
xref: ncithesaurus:Membranous_Urethra ! Membranous Urethra

[Term]
id: UBERON:0001337
name: spongiose part of urethra
alt_id: UBERON:FMA_19675-MA_0002643
def: "." [Wikipedia:Penile_urethra]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Penile urethra" EXACT []
synonym: "penile urethra" EXACT []
synonym: "Spongiose part of urethra" EXACT []
synonym: "Spongiose urethra" EXACT []
synonym: "spongiose urethra" EXACT []
synonym: "Spongy urethra (male)" EXACT []
synonym: "spongy urethra (male)" EXACT []
xref: FMA:19675 ! Spongiose part of urethra
xref: MA:0002643 ! penile urethra
is_a: UBERON:0000063 ! organ segment
relationship: part_of UBERON:0001333 ! male urethra

[Term]
id: UBERON:0001338
name: urethral gland
alt_id: UBERON:FMA_19683-MA_0001688
def: "." [Wikipedia:Urethral_gland]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "urethra gland" EXACT []
synonym: "Urethral gland" EXACT []
xref: FMA:19683 ! Urethral gland
xref: MA:0001688 ! urethra gland
is_a: UBERON:0002530 ! gland
intersection_of: UBERON:0002530 ! gland
intersection_of: OBO_REL:part_of UBERON:0000057 ! urethra
relationship: part_of UBERON:0002330 ! exocrine system

[Term]
id: UBERON:0001339
name: ischiocavernosus
alt_id: UBERON:FMA_19730-MA_0002330
def: "." [Wikipedia:Ischiocavernosus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Ischiocavernosus" EXACT []
xref: FMA:19730 ! Ischiocavernosus
xref: MA:0002330 ! ischiocavernosus
is_a: UBERON:0002379 ! perineal muscle
xref: ncithesaurus:Ischiocavernosus ! Ischiocavernosus

[Term]
id: UBERON:0001340
name: dorsal artery of penis
alt_id: UBERON:FMA_19795-MA_0001946
def: "." [Wikipedia:Dorsal_artery_of_penis]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Dorsal artery of penis" EXACT []
synonym: "Dorsal penile artery" EXACT []
synonym: "dorsal penile artery" EXACT []
synonym: "dorsal penis artery" EXACT []
xref: FMA:19795 ! Dorsal artery of penis
xref: MA:0001946 ! dorsal penis artery
is_a: UBERON:0001637 ! artery
relationship: part_of UBERON:0000989 ! penis

[Term]
id: UBERON:0001341
name: lesser sac
alt_id: UBERON:FMA_19800-MA_0000445
def: "." [Wikipedia:Lesser_sac]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Lesser sac" EXACT []
synonym: "Omental bursa" EXACT []
synonym: "omental bursa" EXACT []
xref: EHDAA:2335 ! omental bursa
xref: FMA:19800 ! Lesser sac
xref: HOG:0000458 ! omental bursa
xref: MA:0000445 ! omental bursa
is_a: UBERON:0000063 ! organ segment
relationship: part_of UBERON:0001179 ! peritoneal cavity

[Term]
id: UBERON:0001342
name: mesovarium
alt_id: UBERON:FMA_19815-ZFA_0000333
def: "." [Wikipedia:Mesovarium]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Mesovarium" EXACT []
xref: FMA:19815 ! Mesovarium
xref: TAO:0000333 ! mesovarium
xref: ZFA:0000333 ! mesovarium
is_a: UBERON:0002095 ! mesentery
relationship: part_of UBERON:0000992 ! ovary
relationship: part_of UBERON:0002095 ! mesentery

[Term]
id: UBERON:0001343
name: seminiferous tubule of testis
alt_id: UBERON:FMA_19825-XAO_0003088
def: "." [Wikipedia:Seminiferous_tubule]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Seminiferous tubule" EXACT []
synonym: "seminiferous tubule" EXACT []
synonym: "Seminiferous tubule of testis" EXACT []
xref: BTO:0001235
xref: FMA:19825 ! Seminiferous tubule of testis
xref: GAID:400 ! seminiferous tubule
xref: HOG:0001363 ! seminiferous tubule
xref: MA:0000412 ! seminiferous tubule
xref: MAT:0000503 ! seminiferous tubule
xref: XAO:0003088 ! seminiferous tubule
is_a: UBERON:0000058 ! duct
relationship: part_of UBERON:0002117 ! testicle
xref: ncithesaurus:Seminiferous_Tubule ! Seminiferous Tubule

[Term]
id: UBERON:0001344
name: epithelium of vagina
alt_id: UBERON:FMA_19978-MA_0001730
comment: This class was created automatically from a combination of ontologies
synonym: "Epithelium of vagina" EXACT []
synonym: "vagina epithelium" EXACT []
synonym: "Vaginal epithelium" EXACT []
synonym: "vaginal epithelium" EXACT []
xref: BTO:0000422
xref: FMA:19978 ! Epithelium of vagina
xref: MA:0001730 ! vagina epithelium
is_a: UBERON:0000486 ! multilaminar epithelium
intersection_of: UBERON:0000483 ! epithelium
intersection_of: part_of UBERON:0000996 ! vagina
relationship: part_of UBERON:0000996 ! vagina
xref: ncithesaurus:Vaginal_Epithelium ! Vaginal Epithelium

[Term]
id: UBERON:0001345
name: fornix
alt_id: UBERON:FMA_19985-MA_0002747
def: "This class was obsoleted." [Wikipedia:Fornix]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
is_obsolete: true
consider: UBERON:0000051
consider: UBERON:0000052

[Term]
id: UBERON:0001346
name: hymen of vagina
alt_id: UBERON:FMA_20005-MA_0002465
comment: This class was created automatically from a combination of ontologies
synonym: "Hymen of vagina" EXACT []
synonym: "Hymen vaginae" EXACT []
synonym: "hymen vaginae" EXACT []
synonym: "Vaginal hymen" EXACT []
synonym: "vaginal hymen" EXACT []
xref: FMA:20005 ! Hymen of vagina
xref: MA:0002465 ! vaginal hymen
is_a: UBERON:0000063 ! organ segment
relationship: part_of UBERON:0000996 ! vagina

[Term]
id: UBERON:0001347
name: white adipose tissue
alt_id: UBERON:FMA_20117-MA_0000058-MIAA_0000199
def: "Adipose tissue, cells of which contain a single large lipid droplet." [Wikipedia:White_adipose_tissue]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Adipocytus unigutturalis" EXACT []
synonym: "adipocytus unigutturalis" EXACT []
synonym: "Textus adiposus albus" EXACT []
synonym: "textus adiposus albus" EXACT []
synonym: "Unilocular adipose tissue" EXACT []
synonym: "unilocular adipose tissue" EXACT []
synonym: "White adipose tissue" EXACT []
synonym: "White fat" EXACT []
synonym: "white fat" EXACT []
xref: EFO:0000813 ! white fat
xref: FMA:20117 ! White adipose tissue
xref: MA:0000058 ! white fat
xref: MAT:0000199 ! white fat
xref: MIAA:0000199 ! white fat
is_a: UBERON:0001013 ! adipose tissue
xref: ncithesaurus:White_Adipose_Tissue ! White Adipose Tissue
xref: BTO:0001456 ! white adipose tissue

[Term]
id: UBERON:0001348
name: brown adipose tissue
alt_id: UBERON:FMA_20118-MA_0000057-MIAA_0000198
def: "Adipose tissue, cells of which contain multiple small lipid droplets." [Wikipedia:Brown_adipose_tissue]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Adipocytus multigutturalis" EXACT []
synonym: "adipocytus multigutturalis" EXACT []
synonym: "Brown adipose tissue" EXACT []
synonym: "Brown fat" EXACT []
synonym: "brown fat" EXACT []
synonym: "Multilocular adipose tissue" EXACT []
synonym: "multilocular adipose tissue" EXACT []
synonym: "Textus adiposus fuscus" EXACT []
synonym: "textus adiposus fuscus" EXACT []
xref: BTO:0000156
xref: EFO:0000812 ! brown fat
xref: FMA:20118 ! Brown adipose tissue
xref: GAID:921 ! brown fat
xref: MA:0000057 ! brown fat
xref: MAT:0000198 ! brown fat
xref: MIAA:0000198 ! brown fat
is_a: UBERON:0001013 ! adipose tissue
xref: ncithesaurus:Brown_Adipose_Tissue ! Brown Adipose Tissue

[Term]
id: UBERON:0001349
name: vestibule
alt_id: UBERON:FMA_20192-XAO_0000199
def: "Anatomical cavity that connects an organ cavity, organ cavity subdivision or cavity of body part subdivision to the exterior, completely or partially surrounded by organs or organ parts that are lined by epithelium. Examples: preputial cavity, vestibule of vagina." [Wikipedia:Vestibule]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Vestibule" EXACT []
xref: FMA:20192 ! Vestibule
xref: GAID:881 ! vestibule
xref: XAO:0000199 ! vestibule
is_a: UBERON:0002553 ! anatomical cavity
relationship: part_of UBERON:0001839 ! bony labyrinth
xref: ncithesaurus:Vestibule ! Vestibule

[Term]
id: UBERON:0001350
name: coccyx
alt_id: UBERON:FMA_20229-MA_0000696
def: "." [Wikipedia:Coccyx]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Coccyx" EXACT []
synonym: "Coccyx [coccygeal vertebrae I-IV]" EXACT []
synonym: "coccyx [coccygeal vertebrae i-iv]" EXACT []
synonym: "tail bone" EXACT []
synonym: "Tailbone" EXACT []
synonym: "tailbone" EXACT []
xref: AAO:0000731 ! coccyx
xref: FMA:20229 ! Coccyx
xref: GAID:239 ! coccyx
xref: galen:Coccyx
xref: MA:0000696 ! tail bone
xref: OpenCyc:Mx4rv1XqHJwpEbGdrcN5Y29ycA
is_a: UBERON:0001474 ! bone
relationship: part_of UBERON:0002415 ! tail
xref: ncithesaurus:Coccyx ! Coccyx

[Term]
id: UBERON:0001351
name: lacrimal sac
alt_id: UBERON:FMA_20289-MA_0001298
def: "." [Wikipedia:Lacrimal_sac]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Lacrimal sac" EXACT []
xref: FMA:20289 ! Lacrimal sac
xref: MA:0001298 ! lacrimal sac
is_a: UBERON:0000063 ! organ segment
relationship: part_of UBERON:0001850 ! lacrimal duct
xref: ncithesaurus:Lacrimal_Sac ! Lacrimal Sac

[Term]
id: UBERON:0001352
name: external acoustic meatus
alt_id: UBERON:FMA_20290-MA_0000260
def: "A tube running from the outer ear to the middle ear. The human ear canal extends from the pinna to the eardrum and is about 26 mm in length and 7 mm in diameter." [Wikipedia:External_acoustic_meatus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Auditory canal" EXACT []
synonym: "auditory canal" EXACT []
synonym: "ear canal" EXACT [Wikipedia:Ear_canal]
synonym: "External acoustic meatus" EXACT []
synonym: "External auditory canal" EXACT []
synonym: "external auditory canal" EXACT []
synonym: "External auditory meatus" EXACT []
synonym: "external auditory meatus" RELATED []
synonym: "Lumen of external acoustic tube" EXACT []
synonym: "lumen of external acoustic tube" EXACT []
xref: EHDAA:8975 ! external auditory meatus
xref: FMA:20290
xref: galen:ExternalAuditoryMeatus
xref: HOG:0000977 ! external auditory meatus
xref: MA:0000260 ! external acoustic meatus
xref: GAID:864 ! ear canal
is_a: UBERON:0000464 ! anatomical space
relationship: connects UBERON:0001691 ! external ear
relationship: connects UBERON:0001756 ! middle ear
xref: FMA:61734 ! External acoustic tube
xref: ncithesaurus:External_Acoustic_Meatus ! External Acoustic Meatus

[Term]
id: UBERON:0001353
name: anal part of perineum
alt_id: UBERON:FMA_20347-MA_0000329
def: "." [Wikipedia:Anal_triangle]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Anal part of perineum" EXACT []
synonym: "Anal region" EXACT []
synonym: "anal region" EXACT []
synonym: "Anal triangle" EXACT []
synonym: "anal triangle" EXACT []
xref: EFO:0000847 ! anal region
xref: EHDAA:2931 ! anal region
xref: FMA:20347 ! Anal part of perineum
xref: HOG:0000395 ! anal region
xref: MA:0000329 ! anal region
xref: MAT:0000042 ! anal region
is_a: UBERON:0000475 ! organism subdivision
xref: ncithesaurus:Anal_Region ! Anal Region

[Term]
id: UBERON:0001354
name: inferior epigastric artery
alt_id: UBERON:FMA_20686-MA_0001978
def: "." [Wikipedia:Inferior_epigastric_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Inferior epigastric artery" EXACT []
xref: FMA:20686 ! Inferior epigastric artery
xref: MA:0001978 ! inferior epigastric artery
xref: OpenCyc:Mx4rdBvQc6gOEdudWQACs5b6Bw
is_a: UBERON:0001637 ! artery
relationship: part_of UBERON:0001308 ! external iliac artery
xref: ncithesaurus:Inferior_Epigastric_Artery ! Inferior Epigastric Artery

[Term]
id: UBERON:0001355
name: deep femoral artery
alt_id: UBERON:FMA_20741-MA_0002027
def: "." [Wikipedia:Deep_femoral_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Arteria profunda femoris" EXACT []
synonym: "arteria profunda femoris" EXACT []
synonym: "Deep femoral artery" EXACT []
synonym: "Profunda femoris artery" EXACT []
synonym: "profunda femoris artery" EXACT []
xref: FMA:20741 ! Deep femoral artery
xref: MA:0002027 ! profunda femoris artery
is_a: UBERON:0001637 ! artery
xref: ncithesaurus:Deep_Femoral_Artery ! Deep Femoral Artery

[Term]
id: UBERON:0001356
name: medial circumflex femoral artery
alt_id: UBERON:FMA_20799-MA_0001996
def: "." [Wikipedia:Medial_circumflex_femoral_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Medial circumflex femoral artery" EXACT []
synonym: "Medial femoral circumflex artery" EXACT []
synonym: "medial femoral circumflex artery" EXACT []
xref: FMA:20799 ! Medial circumflex femoral artery
xref: MA:0001996 ! medial femoral circumflex artery
is_a: UBERON:0001637 ! artery

[Term]
id: UBERON:0001357
name: inferior rectal artery
alt_id: UBERON:FMA_20824-MA_0001979
def: "." [Wikipedia:Inferior_rectal_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Inferior hemorrhoidal artery" EXACT []
synonym: "inferior hemorrhoidal artery" EXACT []
synonym: "Inferior rectal artery" EXACT []
xref: FMA:20824 ! Inferior rectal artery
xref: MA:0001979 ! inferior rectal artery
is_a: UBERON:0001637 ! artery
xref: ncithesaurus:Inferior_Rectal_Artery ! Inferior Rectal Artery

[Term]
id: UBERON:0001358
name: perineal artery
alt_id: UBERON:FMA_20836-MA_0002017
def: "." [Wikipedia:Perineal_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Perineal artery" EXACT []
xref: FMA:20836 ! Perineal artery
xref: MA:0002017 ! perineal artery
is_a: UBERON:0001637 ! artery
xref: ncithesaurus:Perineal_Artery ! Perineal Artery

[Term]
id: UBERON:0001359
name: cerebrospinal fluid
alt_id: UBERON:FMA_20935-MA_0002503
def: "Transudate contained in the subarachnoid space." [Wikipedia:Cerebrospinal_fluid]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Cerebrospinal fluid" EXACT []
synonym: "CSF" EXACT []
synonym: "csf" EXACT []
xref: BTO:0000237
xref: EFO:0000329 ! cerebrospinal fluid
xref: ENVO:02000029
xref: FMA:20935 ! Cerebrospinal fluid
xref: GAID:1181 ! cerebrospinal fluid
xref: HOG:0001278 ! cerebrospinal fluid
xref: MA:0002503 ! cerebrospinal fluid
xref: MAT:0000499 ! cerebrospinal fluid
xref: ZFA:0001626 ! cerebral spinal fluid
is_a: UBERON:0000463 ! portion of organism substance
xref: ncithesaurus:Cerebrospinal_Fluid ! Cerebrospinal Fluid

[Term]
id: UBERON:0001360
name: deep circumflex iliac vein
alt_id: UBERON:FMA_21182-MA_0002099
def: "." [Wikipedia:Deep_circumflex_iliac_vein]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Deep circumflex iliac vein" EXACT []
synonym: "deep iliac circumflex vein" EXACT []
synonym: "Vena circumflexa iliaca profunda" EXACT []
synonym: "vena circumflexa iliaca profunda" EXACT []
xref: FMA:21182 ! Deep circumflex iliac vein
xref: MA:0002099 ! deep iliac circumflex vein
is_a: UBERON:0001638 ! vein

[Term]
id: UBERON:0001361
name: femoral vein
alt_id: UBERON:FMA_21185-MA_0002118
def: "." [Wikipedia:Femoral_vein]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Femoral vein" EXACT []
xref: FMA:21185 ! Femoral vein
xref: GAID:533 ! femoral vein
xref: galen:FemoralVein
xref: MA:0002118 ! femoral vein
is_a: UBERON:0001638 ! vein
relationship: part_of UBERON:0000475 ! organism subdivision
xref: ncithesaurus:Femoral_Vein ! Femoral Vein

[Term]
id: UBERON:0001362
name: perineal vein
alt_id: UBERON:FMA_21246-MA_0002193
comment: This class was created automatically from a combination of ontologies
synonym: "Perineal vein" EXACT []
xref: FMA:21246 ! Perineal vein
xref: MA:0002193 ! perineal vein
is_a: UBERON:0001638 ! vein

[Term]
id: UBERON:0001363
name: great saphenous vein
alt_id: UBERON:FMA_21376-MA_0002216
def: "." [Wikipedia:Great_saphenous_vein]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Great saphenous vein" EXACT []
synonym: "Greater saphenous vein" EXACT []
synonym: "greater saphenous vein" EXACT []
synonym: "Long saphenous vein" EXACT []
synonym: "long saphenous vein" EXACT []
xref: FMA:21376 ! Great saphenous vein
xref: galen:GreaterSaphenousVein
xref: galen:GreatSaphenousVein
xref: MA:0002216 ! great saphenous vein
is_a: UBERON:0001638 ! vein
relationship: part_of UBERON:0000475 ! organism subdivision
xref: ncithesaurus:Long_Saphenous_Vein ! Long Saphenous Vein
xref: BTO:0003271 ! great saphenous vein

[Term]
id: UBERON:0001364
name: circumpennate
alt_id: UBERON:FMA_21431-ZFA_0000271
synonym: "Circumpennate" EXACT []
synonym: "Radial" EXACT []
synonym: "radial" EXACT []
synonym: "radials" RELATED []
xref: AAO:0000790 ! radiale
xref: FMA:21431 ! Circumpennate
xref: OpenCyc:Mx4rvVjBSZwpEbGdrcN5Y29ycA
xref: TAO:0000271 ! radial
xref: ZFA:0000271 ! radial
is_obsolete: true

[Term]
id: UBERON:0001365
name: sacro-iliac joint
alt_id: UBERON:FMA_21440-MA_0001506
def: "." [Wikipedia:Sacro-iliac_joint]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Articulatio sacro-iliaca" EXACT []
synonym: "articulatio sacro-iliaca" EXACT []
synonym: "Sacro-iliac joint" EXACT []
synonym: "Sacroiliac joint" EXACT []
synonym: "sacroiliac joint" EXACT []
xref: FMA:21440 ! Sacro-iliac joint
xref: GAID:268 ! sacroiliac joint
xref: MA:0001506 ! sacroiliac joint
is_a: UBERON:0002217 ! synovial joint
xref: ncithesaurus:Sacroiliac_Joint ! Sacroiliac Joint



[Term]
id: UBERON:0001367
name: external anal sphincter
alt_id: UBERON:FMA_21930-MA_0001531
def: "." [Wikipedia:External_anal_sphincter]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "External anal sphincter" EXACT []
synonym: "External sphincter ani" EXACT []
synonym: "external sphincter ani" EXACT []
synonym: "Sphincter ani externus" EXACT []
synonym: "sphincter ani externus" RELATED []
xref: FMA:21930 ! External anal sphincter
xref: MA:0001531 ! external anal sphincter
is_a: UBERON:0002379 ! perineal muscle
relationship: part_of UBERON:0001353 ! anal part of perineum
xref: ncithesaurus:External_Anal_Sphincter ! External Anal Sphincter

[Term]
id: UBERON:0001368
name: obturator externus
alt_id: UBERON:FMA_22299-MA_0002347
def: "." [Wikipedia:Obturator_externus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "External obturator" EXACT []
synonym: "external obturator" EXACT []
synonym: "Obturator externus" EXACT []
xref: FMA:22299 ! Obturator externus
xref: MA:0002347 ! obturator externus
is_a: UBERON:0002000 ! gluteal muscle

[Term]
id: UBERON:0001369
name: iliacus
alt_id: UBERON:FMA_22310-MA_0002318
def: "." [Wikipedia:Iliacus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Anterior muscle of pelvic girdle" EXACT []
synonym: "anterior muscle of pelvic girdle" EXACT []
synonym: "Iliacus" EXACT []
xref: FMA:22310 ! Iliacus
xref: MA:0002318 ! iliacus
is_a: UBERON:0001497 ! muscle of pelvic girdle
xref: ncithesaurus:Iliacus ! Iliacus

[Term]
id: UBERON:0001370
name: gluteus maximus
alt_id: UBERON:FMA_22314-MA_0002309
def: "." [Wikipedia:Gluteus_maximus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Gluteus maximus" EXACT []
synonym: "gluteus superficialis" RELATED []
synonym: "M.gluteus maximus" EXACT []
synonym: "m.gluteus maximus" EXACT []
xref: FMA:22314 ! Gluteus maximus
xref: MA:0002309 ! gluteus maximus
xref: OpenCyc:Mx4rvVjdMZwpEbGdrcN5Y29ycA
is_a: UBERON:0002000 ! gluteal muscle
xref: ncithesaurus:Gluteus_Maximus ! Gluteus Maximus

[Term]
id: UBERON:0001371
name: gluteus medius
alt_id: UBERON:FMA_22315-MA_0002310
def: "." [Wikipedia:Gluteus_medius]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Gluteus medius" EXACT []
xref: FMA:22315 ! Gluteus medius
xref: galen:GluteusMedius
xref: MA:0002310 ! gluteus medius
is_a: UBERON:0002000 ! gluteal muscle
xref: ncithesaurus:Gluteus_Medius ! Gluteus Medius

[Term]
id: UBERON:0001372
name: psoas minor
alt_id: UBERON:FMA_22350-MA_0002359
def: "." [Wikipedia:Psoas_minor]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Psoas minor" EXACT []
synonym: "Psoas minor muscle" EXACT []
synonym: "psoas minor muscle" EXACT []
xref: FMA:22350 ! Psoas minor
xref: MA:0002359 ! psoas minor
is_a: UBERON:0001630 ! muscle organ
xref: ncithesaurus:Psoas_Minor ! Psoas Minor
xref: BTO:0001878 ! psoas minor

[Term]
id: UBERON:0001373
name: sartorius
alt_id: UBERON:FMA_22353-MA_0002368
def: "." [Wikipedia:Sartorius]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Sartorius" EXACT []
xref: BTO:0001215
xref: EHDAA:10583 ! sartorius
xref: FMA:22353 ! Sartorius
xref: HOG:0001192 ! sartorius
xref: MA:0002368 ! sartorius
is_a: UBERON:0001630 ! muscle organ

[Term]
id: UBERON:0001374
name: biceps femoris
alt_id: UBERON:FMA_22356-MA_0002270
def: "." [Wikipedia:Biceps_femoris]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Biceps femoris" EXACT []
xref: FMA:22356 ! Biceps femoris
xref: galen:BicepsFemoris
xref: MA:0002270 ! biceps femoris
is_a: UBERON:0001630 ! muscle organ
relationship: part_of UBERON:0002103 ! hindlimb
xref: ncithesaurus:Biceps_Femoris ! Biceps Femoris
xref: BTO:0003418 ! biceps femoris

[Term]
id: UBERON:0001375
name: semitendinosus
alt_id: UBERON:FMA_22357-MA_0002375
def: "." [Wikipedia:Semitendinosus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Semitendinosus" EXACT []
synonym: "Semitendinosus muscle" EXACT []
synonym: "semitendinosus muscle" EXACT []
xref: BTO:0001236
xref: FMA:22357 ! Semitendinosus
xref: MA:0002375 ! semitendinosus
is_a: UBERON:0001630 ! muscle organ
relationship: part_of UBERON:0002103 ! hindlimb
xref: ncithesaurus:Semitendinosus ! Semitendinosus

[Term]
id: UBERON:0001376
name: tensor fasciae latae
alt_id: UBERON:FMA_22423-MA_0002391
def: "." [Wikipedia:Tensor_fasciae_latae]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "tensor fasciae lata" EXACT []
synonym: "Tensor fasciae latae" EXACT []
synonym: "Tensor of fascia lata" EXACT []
synonym: "tensor of fascia lata" EXACT []
xref: FMA:22423 ! Tensor fasciae latae
xref: MA:0002391 ! tensor fasciae lata
is_a: UBERON:0002000 ! gluteal muscle
xref: ncithesaurus:Tensor_Fasciae_Lata ! Tensor Fasciae Lata

[Term]
id: UBERON:0001377
name: quadriceps femoris
alt_id: UBERON:FMA_22428-MA_0002363
def: "." [Wikipedia:Quadriceps_femoris]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Quadriceps" EXACT []
synonym: "quadriceps" EXACT []
synonym: "Quadriceps femoris" EXACT []
xref: BTO:0001149
xref: EHDAA:8299 ! quadriceps
xref: FMA:22428 ! Quadriceps femoris
xref: HOG:0000828 ! quadriceps
xref: MA:0002363 ! quadriceps
xref: OpenCyc:Mx4rvVjd-JwpEbGdrcN5Y29ycA
is_a: UBERON:0001630 ! muscle organ
relationship: part_of UBERON:0002103 ! hindlimb

[Term]
id: UBERON:0001378
name: rectus femoris
alt_id: UBERON:FMA_22430-MA_0002365
def: "." [Wikipedia:Rectus_femoris]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Musculus rectos femoris" EXACT []
synonym: "musculus rectos femoris" EXACT []
synonym: "Rectus femoris" EXACT []
xref: FMA:22430 ! Rectus femoris
xref: MA:0002365 ! rectus femoris
is_a: UBERON:0001630 ! muscle organ
relationship: part_of UBERON:0001377 ! quadriceps femoris
xref: ncithesaurus:Rectus_Femoris ! Rectus Femoris
xref: BTO:0001564 ! rectus femoris

[Term]
id: UBERON:0001379
name: vastus lateralis
alt_id: UBERON:FMA_22431-MA_0002402
def: "." [Wikipedia:Vastus_lateralis]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Vastus lateralis" EXACT []
xref: FMA:22431 ! Vastus lateralis
xref: MA:0002402 ! vastus lateralis
is_a: UBERON:0001630 ! muscle organ
relationship: part_of UBERON:0001377 ! quadriceps femoris
xref: ncithesaurus:Vastus_Lateralis ! Vastus Lateralis
xref: BTO:0001563 ! vastus lateralis

[Term]
id: UBERON:0001380
name: vastus medialis
alt_id: UBERON:FMA_22432-MA_0002403
def: "." [Wikipedia:Vastus_medialis]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Vastus medialis" EXACT []
xref: FMA:22432 ! Vastus medialis
xref: MA:0002403 ! vastus medialis
is_a: UBERON:0001630 ! muscle organ
relationship: part_of UBERON:0001377 ! quadriceps femoris

[Term]
id: UBERON:0001381
name: semimembranosus
alt_id: UBERON:FMA_22438-MA_0002371
def: "." [Wikipedia:Semimembranosus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Semimembranosus" EXACT []
xref: FMA:22438 ! Semimembranosus
xref: MA:0002371 ! semimembranosus
is_a: UBERON:0001630 ! muscle organ
relationship: part_of UBERON:0002103 ! hindlimb
xref: ncithesaurus:Semimembranosus ! Semimembranosus
xref: BTO:0003177 ! semimembranosus

[Term]
id: UBERON:0001382
name: pectineus
alt_id: UBERON:FMA_22440-MA_0002353
def: "." [Wikipedia:Pectineus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Pectineus" EXACT []
xref: FMA:22440 ! Pectineus
xref: MA:0002353 ! pectineus
is_a: UBERON:0001630 ! muscle organ
relationship: part_of UBERON:0002103 ! hindlimb
xref: ncithesaurus:Pectineus ! Pectineus

[Term]
id: UBERON:0001383
name: muscle of leg
alt_id: UBERON:FMA_22471-MA_0000672
def: "." [Wikipedia:Leg_muscle]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Leg muscle" EXACT []
synonym: "leg muscle" EXACT []
synonym: "Muscle of leg" EXACT []
xref: BTO:0000722
xref: FMA:22471 ! Muscle of leg
xref: MA:0000672 ! leg muscle
intersection_of: UBERON:0001630 ! muscle organ
intersection_of: part_of UBERON:0000978 ! leg
relationship: part_of UBERON:0000978 ! leg

[Term]
id: UBERON:0001384
name: primary motor cortex
alt_id: UBERON:FMA_224854-MA_0000907
def: "a brain region that in humans is located in the posterior portion of the frontal lobe. It works in association with pre-motor areas to plan and execute movements. M1 contains large neurons known as Betz cells which send long axons down the spinal cord to synapse onto alpha motor neurons which connect to the muscles. Pre-motor areas are involved in planning actions (in concert with the basal ganglia) and refining movements based upon sensory input (this requires the cerebellum). The human primary motor cortex is located in the dorsal part of the precentral gyrus and the anterior bank of the central sulcus. The precentral gyrus is in front of the postcentral gyrus from which it is separated by the central sulcus. Its anterior border is the precentral sulcus, while inferiorly it borders to the lateral fissure (Sylvian fissure). Medially, it is contiguous with the paracentral lobule." [Wikipedia:Primary_motor_cortex]
comment: TODO: in MA this is asserted to be part_of BOTH frontal and parietal cortex. FMA makes no commitment beyond cerebral cortex. Wikipedia says frontal lobe. Check if species difference or difference in definition
subset: uberon_slim
synonym: "Primary motor cortex" EXACT []
xref: FMA:224854 ! Primary motor cortex
xref: MA:0000907 ! primary motor cortex
is_a: UBERON:0003208 ! region of cerebral cortex
relationship: part_of UBERON:0001870 ! frontal lobe
relationship: part_of UBERON:0001872 ! parietal lobe

[Term]
id: UBERON:0001385
name: tibialis anterior
alt_id: UBERON:FMA_22532-MA_0002395
def: "." [Wikipedia:Tibialis_anterior]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Tibialis anterior" EXACT []
synonym: "tibilais cranialis" EXACT []
xref: BTO:0001382
xref: FMA:22532 ! Tibialis anterior
xref: MA:0002395 ! tibialis cranialis
is_a: UBERON:0001383 ! muscle of leg

[Term]
id: UBERON:0001386
name: extensor digitorum longus
alt_id: UBERON:FMA_22534-MA_0002295
def: "." [Wikipedia:Extensor_digitorum_longus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Extensor digitorum longus" EXACT []
xref: BTO:0000436
xref: FMA:22534 ! Extensor digitorum longus
xref: MA:0002295 ! extensor digitorum longus
is_a: UBERON:0001383 ! muscle of leg
xref: ncithesaurus:Extensor_Digitorum_Longus ! Extensor Digitorum Longus

[Term]
id: UBERON:0001387
name: fibularis longus
alt_id: UBERON:FMA_22539-MA_0002356
def: "." [Wikipedia:Fibularis_longus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Fibularis longus" EXACT []
synonym: "Peroneus longus" EXACT []
synonym: "peroneus longus" EXACT []
xref: FMA:22539 ! Fibularis longus
xref: MA:0002356 ! peroneus longus
is_a: UBERON:0001383 ! muscle of leg
xref: ncithesaurus:Peroneus_Longus ! Peroneus Longus

[Term]
id: UBERON:0001388
name: gastrocnemius
alt_id: UBERON:FMA_22541-MA_0002306
def: "." [Wikipedia:Gastrocnemius]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Gastrocnemius" EXACT []
synonym: "M.gastrocnemius" EXACT []
synonym: "m.gastrocnemius" EXACT []
xref: BTO:0000506
xref: EHDAA:8293 ! gastrocnemius
xref: FMA:22541 ! Gastrocnemius
xref: galen:Gastrocnemius
xref: HOG:0001193 ! gastrocnemius
xref: MA:0002306 ! gastrocnemius
is_a: UBERON:0001383 ! muscle of leg
relationship: part_of UBERON:0001665 ! triceps surae

[Term]
id: UBERON:0001389
name: soleus
alt_id: UBERON:FMA_22542-MA_0002424
def: "a powerful muscle in the back part of the lower leg (the calf). It runs from just below the knee to the heel, and is involved in standing and walking. It is closely connected to the gastrocnemius muscle and some anatomists consider them to be a single muscle, the triceps surae. Its name is derived from the solefish whose shape it resembles. The soleus is located in the superficial posterior compartment of the leg. Not all mammals have a soleus muscle; one familiar species that lacks the soleus is the dog." [Wikipedia:Soleus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Soleus" EXACT []
xref: BTO:0001265
xref: FMA:22542 ! Soleus
xref: MA:0002424 ! soleus
is_a: UBERON:0001383 ! muscle of leg
relationship: part_of UBERON:0001665 ! triceps surae
xref: ncithesaurus:Soleus ! Soleus

[Term]
id: UBERON:0001390
name: sural artery
alt_id: UBERON:FMA_22570-MA_0002058
def: "." [Wikipedia:Sural_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Sural artery" EXACT []
xref: FMA:22570 ! Sural artery
xref: MA:0002058 ! sural artery
is_a: UBERON:0001637 ! artery
xref: ncithesaurus:External_Sural_Artery ! Sural Artery

[Term]
id: UBERON:0001391
name: popliteus
alt_id: UBERON:FMA_22590-MA_0002554
def: "." [Wikipedia:Popliteus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "M.popliteus" EXACT []
synonym: "m.popliteus" EXACT []
synonym: "Popliteal muscle" EXACT []
synonym: "popliteal muscle" EXACT []
synonym: "Popliteus" EXACT []
xref: FMA:22590 ! Popliteus
xref: MA:0002554 ! popliteus
is_a: UBERON:0001383 ! muscle of leg

[Term]
id: UBERON:0001392
name: flexor hallucis longus
alt_id: UBERON:FMA_22593-MA_0002301
def: "." [Wikipedia:Flexor_hallucis_longus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Flexor hallucis longus" EXACT []
xref: FMA:22593 ! Flexor hallucis longus
xref: MA:0002301 ! flexor hallucis longus
is_a: UBERON:0001383 ! muscle of leg
xref: ncithesaurus:Flexor_Hallucis_Longus ! Flexor Hallucis Longus

[Term]
id: UBERON:0001393
name: auditory cortex
alt_id: UBERON:FMA_226221-MA_0000942
def: "." [Wikipedia:Auditory_cortex]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Auditory cortex" EXACT []
xref: FMA:226221 ! Auditory cortex
xref: GAID:682 ! auditory cortex
xref: MA:0000942 ! auditory cortex
is_a: UBERON:0003208 ! region of cerebral cortex
relationship: part_of UBERON:0001871 ! temporal lobe
xref: ncithesaurus:Auditory_Cortex ! Auditory Cortex

[Term]
id: UBERON:0001394
name: axillary artery
alt_id: UBERON:FMA_22654-MA_0002573
def: "." [Wikipedia:Axillary_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Axillary artery" EXACT []
synonym: "Axillary part of trunk of subclavian artery" EXACT []
synonym: "axillary part of trunk of subclavian artery" EXACT []
xref: FMA:22654 ! Axillary artery
xref: GAID:473 ! axillary artery
xref: galen:AxillaryArtery
xref: MA:0002573 ! axillary artery
is_a: UBERON:0000063 ! organ segment
relationship: part_of UBERON:0001009 ! circulatory system
relationship: part_of UBERON:0001467 ! shoulder
xref: ncithesaurus:Axillary_Artery ! Axillary Artery

[Term]
id: UBERON:0001395
name: thoraco-acromial artery
alt_id: UBERON:FMA_22671-MA_0002064
def: "." [Wikipedia:Thoraco-acromial_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Acromiothoracic artery" EXACT []
synonym: "acromiothoracic artery" EXACT []
synonym: "Thoraco-acromial artery" EXACT []
synonym: "Thoracoacromial artery" EXACT []
synonym: "thoracoacromial artery" EXACT []
xref: FMA:22671 ! Thoraco-acromial artery
xref: MA:0002064 ! thoraco-acromial artery
is_a: UBERON:0001637 ! artery
relationship: part_of UBERON:0001467 ! shoulder
xref: ncithesaurus:Acromial_Thoracic_Artery ! Thoracoacromial Artery

[Term]
id: UBERON:0001396
name: lateral thoracic artery
alt_id: UBERON:FMA_22674-MA_0001989
def: "." [Wikipedia:Lateral_thoracic_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "External mammary artery" EXACT []
synonym: "external mammary artery" EXACT []
synonym: "Lateral thoracic artery" EXACT []
xref: FMA:22674 ! Lateral thoracic artery
xref: MA:0001989 ! lateral thoracic artery
is_a: UBERON:0001637 ! artery
relationship: part_of UBERON:0001467 ! shoulder
xref: ncithesaurus:Lateral_Thoracic_Artery ! Lateral Thoracic Artery

[Term]
id: UBERON:0001397
name: subscapular artery
alt_id: UBERON:FMA_22677-MA_0002050
def: "." [Wikipedia:Subscapular_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Subscapular artery" EXACT []
xref: FMA:22677 ! Subscapular artery
xref: MA:0002050 ! subscapular artery
is_a: UBERON:0001637 ! artery
xref: ncithesaurus:Subscapular_Artery ! Subscapular Artery

[Term]
id: UBERON:0001398
name: brachial artery
alt_id: UBERON:FMA_22689-MA_0001921
def: "." [Wikipedia:Brachial_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Brachial artery" EXACT []
synonym: "Brachial part of trunk of subclavian artery" EXACT []
synonym: "brachial part of trunk of subclavian artery" EXACT []
xref: FMA:22689 ! Brachial artery
xref: GAID:475 ! brachial artery
xref: galen:BrachialArtery
xref: MA:0001921 ! brachial artery
is_a: UBERON:0001637 ! artery
xref: ncithesaurus:Brachial_Artery ! Brachial Artery

[Term]
id: UBERON:0001399
name: deep brachial artery
alt_id: UBERON:FMA_22695-MA_0002026
def: "." [Wikipedia:Deep_brachial_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Deep brachial artery" EXACT []
synonym: "Profunda brachii artery" EXACT []
synonym: "profunda brachii artery" EXACT []
xref: FMA:22695 ! Deep brachial artery
xref: MA:0002026 ! profunda brachii artery
is_a: UBERON:0001637 ! artery
relationship: part_of UBERON:0001460 ! arm

[Term]
id: UBERON:0001400
name: iliocostalis thoracis
alt_id: UBERON:FMA_22703-MA_0002320
def: "." [Wikipedia:Iliocostalis_thoracis]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Iliocostalis thoracis" EXACT []
xref: FMA:22703 ! Iliocostalis thoracis
xref: MA:0002320 ! iliocostalis thoracis
is_a: UBERON:0002251 ! iliocostalis

[Term]
id: UBERON:0001401
name: longissimus thoracis
alt_id: UBERON:FMA_22709-MA_0002339
def: "." [Wikipedia:Longissimus_thoracis]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Longissimus thoracis" EXACT []
xref: FMA:22709 ! Longissimus thoracis
xref: MA:0002339 ! longissimus thoracis
is_a: UBERON:0001630 ! muscle organ
xref: ncithesaurus:Longissimus_Thoracis ! Longissimus Thoracis
xref: BTO:0001651 ! longissimus thoracis

[Term]
id: UBERON:0001402
name: longissimus cervicis
alt_id: UBERON:FMA_22711-MA_0002337
def: "." [Wikipedia:Longissimus_cervicis]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Longissimus cervicis" EXACT []
xref: FMA:22711 ! Longissimus cervicis
xref: MA:0002337 ! longissimus cervicis
is_a: UBERON:0001630 ! muscle organ
xref: ncithesaurus:Longissimus_Cervicis ! Longissimus Cervicis
xref: BTO:0001650 ! longissimus cervicis

[Term]
id: UBERON:0001403
name: longissimus capitis
alt_id: UBERON:FMA_22714-MA_0002336
def: "." [Wikipedia:Longissimus_capitis]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Longissimus capitis" EXACT []
xref: FMA:22714 ! Longissimus capitis
xref: MA:0002336 ! longissimus capitis
is_a: UBERON:0001630 ! muscle organ
xref: ncithesaurus:Longissimus_Capitis ! Longissimus Capitis
xref: BTO:0001649 ! longissimus capitis

[Term]
id: UBERON:0001404
name: radial artery
alt_id: UBERON:FMA_22730-MA_0002034
def: "." [Wikipedia:Radial_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Radial artery" EXACT []
xref: FMA:22730 ! Radial artery
xref: GAID:506 ! radial artery
xref: MA:0002034 ! radial artery
is_a: UBERON:0001637 ! artery
xref: ncithesaurus:Radial_Artery ! Radial Artery

[Term]
id: UBERON:0001405
name: spinalis thoracis
alt_id: UBERON:FMA_22765-MA_0002381
def: "." [Wikipedia:Spinalis_thoracis]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Spinalis thoracis" EXACT []
xref: FMA:22765 ! Spinalis thoracis
xref: MA:0002381 ! spinalis thoracis
is_a: UBERON:0001630 ! muscle organ
xref: ncithesaurus:Spinalis_Thoracis ! Spinalis Thoracis

[Term]
id: UBERON:0001406
name: ulnar artery
alt_id: UBERON:FMA_22796-MA_0002069
def: "." [Wikipedia:Ulnar_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Ulnar artery" EXACT []
xref: FMA:22796 ! Ulnar artery
xref: GAID:515 ! ulnar artery
xref: MA:0002069 ! ulnar artery
is_a: UBERON:0001637 ! artery
xref: ncithesaurus:Ulnar_Artery ! Ulnar Artery

[Term]
id: UBERON:0001407
name: semispinalis thoracis
alt_id: UBERON:FMA_22828-MA_0002374
def: "." [Wikipedia:Semispinalis_thoracis]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Semispinalis thoracis" EXACT []
xref: FMA:22828 ! Semispinalis thoracis
xref: MA:0002374 ! semispinalis thoracis
is_a: UBERON:0001630 ! muscle organ
xref: ncithesaurus:Semispinalis_Thoracis ! Semispinalis Thoracis

[Term]
id: UBERON:0001408
name: semispinalis cervicis
alt_id: UBERON:FMA_22829-MA_0002373
def: "." [Wikipedia:Semispinalis_cervicis]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Semispinalis cervicis" EXACT []
xref: FMA:22829 ! Semispinalis cervicis
xref: MA:0002373 ! semispinalis cervicis
is_a: UBERON:0001630 ! muscle organ
xref: ncithesaurus:Semispinalis_Cervicis ! Semispinalis Cervicis

[Term]
id: UBERON:0001409
name: semispinalis capitis
alt_id: UBERON:FMA_22830-MA_0002372
def: "." [Wikipedia:Semispinalis_capitis]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Semispinalis capitis" EXACT []
xref: FMA:22830 ! Semispinalis capitis
xref: MA:0002372 ! semispinalis capitis
is_a: UBERON:0001630 ! muscle organ
xref: ncithesaurus:Semispinalis_Capitis ! Semispinalis Capitis

[Term]
id: UBERON:0001410
name: common palmar digital artery
alt_id: UBERON:FMA_22852-MA_0001957
def: "." [Wikipedia:Common_palmar_digital_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "common palmar digital arteries" EXACT []
synonym: "Common palmar digital artery" EXACT []
xref: FMA:22852 ! Common palmar digital artery
xref: MA:0001957 ! common palmar digital arteries
is_a: UBERON:0001637 ! artery
xref: ncithesaurus:Common_Palmar_Digital_Artery ! Common Palmar Digital Artery

[Term]
id: UBERON:0001411
name: basilic vein
alt_id: UBERON:FMA_22908-MA_0002086
def: "." [Wikipedia:Basilic_vein]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Basilic vein" EXACT []
synonym: "Basilic vein of forearm" EXACT []
synonym: "basilic vein of forearm" EXACT []
xref: FMA:22908 ! Basilic vein
xref: galen:BasilicVein
xref: MA:0002086 ! basilic vein
is_a: UBERON:0001638 ! vein
relationship: part_of UBERON:0001460 ! arm
xref: ncithesaurus:Basilic_Vein ! Basilic Vein

[Term]
id: UBERON:0001412
name: common palmar digital vein
alt_id: UBERON:FMA_22923-MA_0002121
comment: This class was created automatically from a combination of ontologies
synonym: "Common palmar digital vein" EXACT []
xref: FMA:22923 ! Common palmar digital vein
xref: MA:0002121 ! common palmar digital vein
is_a: UBERON:0001638 ! vein

[Term]
id: UBERON:0001413
name: brachial vein
alt_id: UBERON:FMA_22934-MA_0002087
def: "." [Wikipedia:Brachial_vein]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Brachial vein" EXACT []
xref: FMA:22934 ! Brachial vein
xref: galen:BrachialVein
xref: MA:0002087 ! brachial vein
is_a: UBERON:0001638 ! vein
relationship: part_of UBERON:0001460 ! arm
xref: ncithesaurus:Brachial_Vein ! Brachial Vein

[Term]
id: UBERON:0001414
name: median cubital vein
alt_id: UBERON:FMA_22963-MA_0002176
def: "." [Wikipedia:Median_cubital_vein]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Median cubital vein" EXACT []
xref: FMA:22963 ! Median cubital vein
xref: MA:0002176 ! median cubital vein
is_a: UBERON:0001638 ! vein

[Term]
id: UBERON:0001415
name: skin of pelvis
alt_id: UBERON:FMA_22984-MA_0000546
comment: This class was created automatically from a combination of ontologies
synonym: "Pelvic skin" EXACT []
synonym: "pelvic skin" EXACT []
synonym: "pelvis skin" EXACT []
synonym: "Skin of pelvis" EXACT []
xref: FMA:22984 ! Skin of pelvis
xref: MA:0000546 ! pelvis skin
is_a: UBERON:0001085 ! skin of trunk
intersection_of: UBERON:0000014 ! zone of skin
intersection_of: part_of UBERON:0002355 ! pelvis
relationship: part_of UBERON:0001085 ! skin of trunk
relationship: part_of UBERON:0002355 ! pelvis

[Term]
id: UBERON:0001416
name: skin of abdomen
alt_id: UBERON:FMA_22988-MA_0000523
comment: This class was created automatically from a combination of ontologies
synonym: "abdomen skin" EXACT []
synonym: "Abdominal skin" EXACT []
synonym: "abdominal skin" EXACT []
synonym: "Skin of abdomen" EXACT []
xref: EFO:0000214 ! abdominal skin
xref: FMA:22988 ! Skin of abdomen
xref: MA:0000523 ! abdomen skin
is_a: UBERON:0001085 ! skin of trunk
intersection_of: UBERON:0000014 ! zone of skin
intersection_of: part_of UBERON:0000916 ! abdomen
relationship: part_of UBERON:0000916 ! abdomen
xref: FMA:23000 ! Zone of skin of abdomen
xref: ncithesaurus:Abdominal_Skin ! Abdominal Skin

[Term]
id: UBERON:0001417
name: skin of neck
alt_id: UBERON:FMA_23021-MA_0000590
comment: This class was created automatically from a combination of ontologies
synonym: "Neck skin" EXACT []
synonym: "neck skin" EXACT []
synonym: "Skin of neck" EXACT []
xref: FMA:23021 ! Skin of neck
xref: MA:0000590 ! neck skin
is_a: UBERON:0000014 ! zone of skin
intersection_of: UBERON:0000014 ! zone of skin
intersection_of: part_of UBERON:0000974 ! neck
relationship: part_of UBERON:0000974 ! neck
xref: FMA:23022 ! Zone of skin of neck
xref: ncithesaurus:Neck_Skin ! Neck Skin

[Term]
id: UBERON:0001418
name: skin of thorax
alt_id: UBERON:FMA_23028-MA_0000564
comment: This class was created automatically from a combination of ontologies
synonym: "Skin of thorax" EXACT []
synonym: "Thoracic skin" EXACT []
synonym: "thoracic skin" EXACT []
synonym: "thorax skin" EXACT []
synonym: "upper body skin" RELATED []
xref: FMA:23028 ! Skin of thorax
xref: MA:0000564 ! thorax skin
is_a: UBERON:0001085 ! skin of trunk
intersection_of: UBERON:0000014 ! zone of skin
intersection_of: part_of UBERON:0000915 ! thorax
relationship: part_of UBERON:0000915 ! thorax
xref: FMA:23029 ! Zone of skin of thorax

[Term]
id: UBERON:0001419
name: skin of limb
alt_id: UBERON:FMA_23100-MA_0000694
comment: This class was created automatically from a combination of ontologies
synonym: "Limb skin" EXACT []
synonym: "limb skin" EXACT []
synonym: "Skin of limb" EXACT []
xref: FMA:23100 ! Skin of limb
xref: MA:0000694 ! limb skin
is_a: UBERON:0000014 ! zone of skin
intersection_of: UBERON:0000014 ! zone of skin
intersection_of: part_of UBERON:0002101 ! limb
relationship: part_of UBERON:0002101 ! limb

[Term]
id: UBERON:0001420
name: subscapular vein
alt_id: UBERON:FMA_23113-MA_0002224
comment: This class was created automatically from a combination of ontologies
synonym: "Subscapular vein" EXACT []
xref: FMA:23113 ! Subscapular vein
xref: MA:0002224 ! subscapular vein
is_a: UBERON:0001638 ! vein

[Term]
id: UBERON:0001421
name: pectoral girdle
alt_id: UBERON:FMA_23217-MA_0000292-MIAA_0000181-XAO_0003063-ZFA_0000407
def: "Subdivision of free upper limb, which is the proximal segment of an upper limb and links the free upper limb to the trunk; it is demarcated by the plane of the surface of the glenoid fossa from the free upper limb; together with the free upper limb, it constitutes the upper limb. Examples: There are only two instances, right and left pectoral girdles. // Arched skeletal structure that supports the forelimbs, the rudiments of which can be distinguished in mesenchyme at NF stage 51, and is complete by NF stage 60." [ISBN:0471209627, NLM:pectoral+girdle, Wikipedia:Pectoral_girdle]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "girdle - pectoral" EXACT []
synonym: "Pectoral girdle" EXACT []
synonym: "pectoral girdle bone" EXACT []
synonym: "shoulder bones" RELATED []
synonym: "Shoulder girdle" EXACT []
synonym: "shoulder girdle" RELATED []
synonym: "Upper limb girdle" EXACT []
synonym: "upper limb girdle" EXACT []
xref: AAO:0000422 ! pectoral_girdle
xref: FMA:23217 ! Pectoral girdle
xref: HOG:0001156 ! pectoral girdle
xref: MA:0000292 ! pectoral girdle bone
xref: MAT:0000181 ! girdle - pectoral
xref: MIAA:0000181 ! girdle - pectoral
xref: TAO:0000407 ! pectoral girdle
xref: XAO:0003063 ! pectoral girdle
xref: ZFA:0000407 ! pectoral girdle
is_a: UBERON:0000477 ! anatomical cluster
is_a: UBERON:0002529 ! limb segment
relationship: part_of UBERON:0001443 ! chest
relationship: part_of UBERON:0002102 ! forelimb
xref: ncithesaurus:Shoulder_Girdle ! Shoulder Girdle

[Term]
id: UBERON:0001422
name: facial lymphatic vessel
alt_id: UBERON:FMA_233946-ZFA_0005108
comment: This class was created automatically from a combination of ontologies
synonym: "Buccal lymphatic vessel" EXACT []
synonym: "buccal lymphatic vessel" EXACT []
synonym: "Facial lymphatic vessel" EXACT []
synonym: "FL" RELATED []
xref: FMA:233946 ! Facial lymphatic vessel
xref: TAO:0005108 ! facial lymphatic vessel
xref: ZFA:0005108 ! facial lymphatic vessel
is_a: UBERON:0001473 ! lymphatic vessel
intersection_of: UBERON:0001473 ! lymphatic vessel
intersection_of: part_of UBERON:0001456 ! face

[Term]
id: UBERON:0001423
name: radius
alt_id: UBERON:FMA_23463-MA_0001357
def: "." [Wikipedia:Radius_(bone)]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Radius" EXACT []
xref: AAO:0000788 ! radius
xref: FMA:23463 ! Radius
xref: GAID:185 ! radius
xref: MA:0001357 ! radius
is_a: UBERON:0001440 ! skeleton of upper limb
relationship: part_of UBERON:0002386 ! forearm
xref: ncithesaurus:Radius ! Radius

[Term]
id: UBERON:0001424
name: ulna
alt_id: UBERON:FMA_23466-MA_0001358
def: "." [Wikipedia:Ulna]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Ulna" EXACT []
xref: AAO:0000789 ! ulna
xref: FMA:23466 ! Ulna
xref: GAID:188 ! ulna
xref: MA:0001358 ! ulna
is_a: UBERON:0001440 ! skeleton of upper limb
relationship: part_of UBERON:0002386 ! forearm
xref: ncithesaurus:Ulna ! Ulna

[Term]
id: UBERON:0001425
name: pectoral lymphatic vessel
alt_id: UBERON:FMA_234865-ZFA_0005107
comment: This class was created automatically from a combination of ontologies
synonym: "Pectoral lymphatic vessel" EXACT []
synonym: "PL" RELATED []
xref: FMA:234865 ! Pectoral lymphatic vessel
xref: TAO:0005107 ! pectoral lymphatic vessel
xref: ZFA:0005107 ! pectoral lymphatic vessel
is_a: UBERON:0001473 ! lymphatic vessel

[Term]
id: UBERON:0001426
name: jugular lymphatic vessel
alt_id: UBERON:FMA_234908-ZFA_0005109
comment: This class was created automatically from a combination of ontologies
synonym: "JL" RELATED []
synonym: "Jugular lymphatic vessel" EXACT []
xref: FMA:234908 ! Jugular lymphatic vessel
xref: TAO:0005109 ! jugular lymphatic vessel
xref: ZFA:0005109 ! jugular lymphatic vessel
is_a: UBERON:0001473 ! lymphatic vessel

[Term]
id: UBERON:0001427
name: scaphoid
alt_id: UBERON:FMA_23709-MA_0002555
def: "." [Wikipedia:Scaphoid]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Navicular bone of hand" EXACT []
synonym: "navicular bone of hand" EXACT []
synonym: "navicular of hand" RELATED []
synonym: "radial carpal bone" RELATED []
synonym: "Scaphoid" EXACT []
synonym: "Scaphoid bone" EXACT []
synonym: "scaphoid bone" EXACT []
xref: FMA:23709 ! Scaphoid
xref: GAID:180 ! scaphoid bone
xref: MA:0002555 ! scaphoid
is_a: UBERON:0001480 ! proximal carpal bone
relationship: part_of UBERON:0001462 ! wrist
relationship: part_of UBERON:0001480 ! proximal carpal bone
xref: ncithesaurus:Scaphoid_Bone ! Scaphoid Bone

[Term]
id: UBERON:0001428
name: lunate
alt_id: UBERON:FMA_23712-MA_0002556
def: "." [Wikipedia:Lunate]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Intermediate carpal bone" EXACT []
synonym: "intermediate carpal bone" RELATED []
synonym: "Lunate" EXACT []
synonym: "Lunate bone" EXACT []
synonym: "lunate bone" EXACT []
synonym: "semilunar" RELATED []
synonym: "Semilunar bone" EXACT []
synonym: "semilunar bone" EXACT []
xref: FMA:23712 ! Lunate
xref: GAID:181 ! semilunar bone
xref: MA:0002556 ! lunate
is_a: UBERON:0001480 ! proximal carpal bone
relationship: part_of UBERON:0001462 ! wrist
relationship: part_of UBERON:0001480 ! proximal carpal bone
xref: ncithesaurus:Lunate_Bone ! Lunate Bone

[Term]
id: UBERON:0001429
name: pisiform
alt_id: UBERON:FMA_23718-MA_0001339
def: "." [Wikipedia:Pisiform]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "accessory carpal bone" RELATED []
synonym: "Pisiform" EXACT []
synonym: "Pisiform bone" EXACT []
synonym: "pisiform bone" EXACT []
xref: FMA:23718 ! Pisiform
xref: MA:0001339 ! pisiform
is_a: UBERON:0001480 ! proximal carpal bone
relationship: part_of UBERON:0001462 ! wrist
xref: ncithesaurus:Pisiform_Bone ! Pisiform Bone

[Term]
id: UBERON:0001430
name: trapezium
alt_id: UBERON:FMA_23721-MA_0001340
def: "." [Wikipedia:Trapezium]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Greater multangular bone" EXACT []
synonym: "greater multangular bone" EXACT []
synonym: "greater multiangular" RELATED []
synonym: "hand distal carpal bone 1" RELATED []
synonym: "Trapezial bone" EXACT []
synonym: "trapezial bone" EXACT []
synonym: "Trapezium" EXACT []
synonym: "Trapezium bone" EXACT []
synonym: "trapezium bone" EXACT []
xref: FMA:23721 ! Trapezium
xref: MA:0001340 ! trapezium
xref: OpenCyc:Mx4rv3CbrJwpEbGdrcN5Y29ycA
is_a: UBERON:0001481 ! distal carpal bone
relationship: part_of UBERON:0001462 ! wrist
xref: ncithesaurus:Trapezial_Bone ! Trapezial Bone

[Term]
id: UBERON:0001431
name: trapezoid
alt_id: UBERON:FMA_23724-MA_0001341
def: "." [Wikipedia:Trapezoid]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "hand distal carpal bone 2" RELATED []
synonym: "Lesser multangular bone" EXACT []
synonym: "lesser multangular bone" EXACT []
synonym: "lesser multiangular" RELATED []
synonym: "Trapezoid" EXACT []
synonym: "Trapezoid bone" EXACT []
synonym: "trapezoid bone" EXACT []
xref: FMA:23724 ! Trapezoid
xref: MA:0001341 ! trapezoid
xref: OpenCyc:Mx4rvVvsjpwpEbGdrcN5Y29ycA
is_a: UBERON:0001481 ! distal carpal bone
relationship: part_of UBERON:0001462 ! wrist
xref: ncithesaurus:Trapezoid_Bone ! Trapezoid Bone

[Term]
id: UBERON:0001432
name: capitate
alt_id: UBERON:FMA_23727-MA_0001342
def: "." [Wikipedia:Capitate]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Capitate" EXACT []
synonym: "Capitate bone" EXACT []
synonym: "capitate bone" EXACT []
synonym: "hand distal carpal bone 3" RELATED []
synonym: "Os Magnum (Carpus)" EXACT []
synonym: "os magnum (carpus)" EXACT []
xref: FMA:23727 ! Capitate
xref: galen:Capitate
xref: MA:0001342 ! capitate
xref: OpenCyc:Mx4rvZFPrZwpEbGdrcN5Y29ycA
is_a: UBERON:0001481 ! distal carpal bone
relationship: part_of UBERON:0001462 ! wrist
xref: ncithesaurus:Capitate_Bone ! Capitate Bone

[Term]
id: UBERON:0001433
name: hamate
alt_id: UBERON:FMA_23730-MA_0001343
def: "." [Wikipedia:Hamate]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Hamate" EXACT []
synonym: "Hamate bone" EXACT []
synonym: "hamate bone" EXACT []
synonym: "hand distal carpal bone 4" RELATED []
synonym: "unciform" RELATED []
synonym: "Unciform bone" EXACT []
synonym: "unciform bone" EXACT []
synonym: "uncinate" RELATED []
xref: FMA:23730 ! Hamate
xref: galen:Hamate
xref: MA:0001343 ! hamate
is_a: UBERON:0001481 ! distal carpal bone
relationship: part_of UBERON:0001462 ! wrist
xref: ncithesaurus:Hamate_Bone ! Hamate Bone

[Term]
id: UBERON:0001434
name: skeleton
alt_id: UBERON:FMA_23875-FMA_23881-MA_0000018-MIAA_0000032-XAO_0003060-ZFA_0000434
def: "Set of organ system subdivision which consists of all the bones in the body. // Anatomical system that provides physical support to the organism." [AAO:0000566, Wikipedia:Skeleton]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "set of all bones" EXACT []
synonym: "set of bones of body" EXACT []
synonym: "skeletal system" EXACT []
synonym: "skeleton component" RELATED []
synonym: "skeleton system" EXACT []
xref: AAO:0000566 ! skeletal_system
xref: EFO:0000806 ! skeleton
xref: EHDAA:5047 ! skeleton
xref: EHDAA:8005 ! skeleton
xref: EHDAA:8041 ! skeleton
xref: FMA:23875 ! Skeleton
xref: FMA:23881 ! Skeletal system
xref: GAID:177 ! skeleton
xref: HOG:0001254 ! skeletal system
xref: MA:0000018 ! skeletal system
xref: MAT:0000032 ! skeleton
xref: MIAA:0000032 ! skeleton
xref: OpenCyc:Mx4rvVi1rpwpEbGdrcN5Y29ycA
xref: TAO:0000434 ! skeletal system
xref: XAO:0003060 ! skeletal system
xref: ZFA:0000434 ! skeletal system
is_a: UBERON:0000467 ! anatomical system
disjoint_from: UBERON:0000075 ! subdivision of skeleton
disjoint_from: UBERON:0000949 ! endocrine system
disjoint_from: UBERON:0000990 ! reproductive system
disjoint_from: UBERON:0001004 ! respiratory system
disjoint_from: UBERON:0001007 ! digestive system
disjoint_from: UBERON:0001008 ! urinary system
disjoint_from: UBERON:0001009 ! circulatory system
disjoint_from: UBERON:0001016 ! nervous system
disjoint_from: UBERON:0001032 ! sense organ system
disjoint_from: UBERON:0001033 ! gustatory system
disjoint_from: UBERON:0001474 ! bone
disjoint_from: UBERON:0002204 ! musculoskeletal system
disjoint_from: UBERON:0002294 ! biliary system
disjoint_from: UBERON:0002330 ! exocrine system
disjoint_from: UBERON:0002390 ! hematopoietic system
disjoint_from: UBERON:0002405 ! immune system
disjoint_from: UBERON:0002416 ! integumental system
disjoint_from: UBERON:0002423 ! hepatobiliary system
relationship: part_of UBERON:0002204 ! musculoskeletal system
relatiosnhip: has_part UBERON:0001474
xref: ncithesaurus:Skeletal_System ! Skeletal System
xref: BTO:0001486 ! skeletal system

[Term]
id: UBERON:0001435
name: carpal bone
alt_id: UBERON:FMA_23889-MA_0000296
def: "." [Wikipedia:Carpal_bone]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Bone of carpus" EXACT []
synonym: "bone of carpus" EXACT []
synonym: "Carpal bone" EXACT []
xref: FMA:23889 ! Carpal bone
xref: GAID:179 ! carpal bone
xref: galen:CarpalBone
xref: MA:0000296 ! carpal bone
is_a: UBERON:0001442 ! skeleton of hand
xref: ncithesaurus:Carpal_Bone ! Carpal Bone


[Term]
id: UBERON:0001437
name: epiphysis
alt_id: UBERON:FMA_24012-ZFA_0000019
def: "Subdivision of long bone which forms its expanded proximal or distal articular end; together with other the subdivisions of long bone, it constitutes the long bone. Examples: proximal epiphysis of humerus, distal epiphysis of femur." [Wikipedia:Epiphysis, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "End of long bone" EXACT []
synonym: "end of long bone" EXACT []
synonym: "Epiphysis" EXACT []
synonym: "pineal gland" RELATED []
xref: AAO:0000742 ! epiphysis
xref: BTO:0000413
xref: FMA:24012 ! Epiphysis
xref: TAO:0000019 ! epiphysis
is_a: UBERON:0002530 ! gland
relationship: part_of UBERON:0001474 ! bone

[Term]
id: UBERON:0001438
name: metaphysis
alt_id: UBERON:FMA_24014-MA_0001363
def: "Subdivision of diaphysis which forms the proximal or distal end of diaphysis next to the epiphysis; together with diaphysis proper, it constitutes the diaphysis. Examples: proximal metaphysis of humerus, distal metaphysis of femur." [Wikipedia:Metaphysis]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Diaphyseal end of long bone" EXACT []
synonym: "diaphyseal end of long bone" EXACT []
synonym: "long bone metaphysis" EXACT []
synonym: "Metaphysis" EXACT []
xref: FMA:24014 ! Metaphysis
xref: MA:0001363 ! long bone metaphysis
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0002428 ! limb bone
xref: ncithesaurus:Metaphysis ! Metaphysis

[Term]
id: UBERON:0001439
name: compact bone
alt_id: UBERON:FMA_24018-MA_0001461
def: "." [Wikipedia:Compact_bone]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Compact bone" EXACT []
synonym: "Compact bone tissue" EXACT []
synonym: "compact bone tissue" EXACT []
synonym: "Cortical bone" EXACT []
synonym: "cortical bone" EXACT []
synonym: "Substantia compacta (Pars ossea)" EXACT []
synonym: "substantia compacta (pars ossea)" EXACT []
xref: FMA:24018 ! Compact bone
xref: galen:CorticalBone
xref: MA:0001461 ! compact bone
is_a: UBERON:0000061 ! anatomical structure
relationship: part_of UBERON:0001474 ! bone
xref: ncithesaurus:Cortical_Bone ! Cortical Bone

[Term]
id: UBERON:0001440
name: skeleton of upper limb
alt_id: UBERON:FMA_24139-MA_0000612
comment: This class was created automatically from a combination of ontologies
synonym: "Bones of upper limb" EXACT []
synonym: "bones of upper limb" EXACT []
synonym: "forelimb bone" EXACT []
synonym: "Set of bones of upper limb" EXACT []
synonym: "set of bones of upper limb" EXACT []
synonym: "Skeleton of upper limb" EXACT []
synonym: "Upper limb skeleton" EXACT []
synonym: "upper limb skeleton" EXACT []
xref: FMA:24139 ! Skeleton of upper limb
xref: MA:0000612 ! forelimb bone
is_a: UBERON:0000075 ! subdivision of skeleton
intersection_of: UBERON:0000075 ! subdivision of skeleton
intersection_of: part_of UBERON:0002102 ! forelimb
relationship: part_of UBERON:0002102 ! forelimb

[Term]
id: UBERON:0001441
name: skeleton of lower limb
alt_id: UBERON:FMA_24140-MA_0000670
def: "." [Wikipedia:Leg_bone]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Bones of lower limb" EXACT []
synonym: "bones of lower limb" EXACT []
synonym: "leg bone" EXACT []
synonym: "Lower limb skeleton" EXACT []
synonym: "lower limb skeleton" EXACT []
synonym: "Set of bones of lower limb" EXACT []
synonym: "set of bones of lower limb" EXACT []
synonym: "Skeleton of lower limb" EXACT []
xref: FMA:24140 ! Skeleton of lower limb
xref: GAID:198 ! leg bone
xref: MA:0000670 ! leg bone
xref: OpenCyc:Mx4rvZcKkZwpEbGdrcN5Y29ycA
intersection_of: UBERON:0000075 ! subdivision of skeleton
intersection_of: part_of UBERON:0002103 ! hindlimb
relationship: has_part UBERON:0002428 ! limb bone
relationship: part_of UBERON:0000978 ! leg

[Term]
id: UBERON:0001442
name: skeleton of hand
alt_id: UBERON:FMA_24159-MA_0000619
comment: This class was created automatically from a combination of ontologies
synonym: "Bones of hand" EXACT []
synonym: "bones of hand" EXACT []
synonym: "hand bone" EXACT []
synonym: "Hand skeleton" EXACT []
synonym: "hand skeleton" EXACT []
synonym: "Set of bones of hand" EXACT []
synonym: "set of bones of hand" EXACT []
synonym: "Skeleton of hand" EXACT []
xref: FMA:24159 ! Skeleton of hand
xref: MA:0000619 ! hand bone
xref: OpenCyc:Mx4rvdHPJJwpEbGdrcN5Y29ycA
is_a: UBERON:0001440 ! skeleton of upper limb
intersection_of: UBERON:0000075 ! subdivision of skeleton
intersection_of: part_of UBERON:0002398 ! hand
relationship: part_of UBERON:0002398 ! hand

[Term]
id: UBERON:0001443
name: chest
alt_id: UBERON:FMA_24216-MA_0000031
def: "Subdivision of thorax, which is the anterolateral part of the thorax and is demarcated from the back of the thorax by the external surface of the posterolateral part of the rib cage, the anterior surface of the thoracic vertebral column and the posterior axillary lines; together with the back of the thorax, it constitutes the thorax. Examples: There is only one chest." [Wikipedia:Chest]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Anterior thoracic region" EXACT []
synonym: "anterior thoracic region" EXACT []
synonym: "Anterolateral part of thorax" EXACT []
synonym: "anterolateral part of thorax" EXACT []
synonym: "Chest" EXACT []
synonym: "Front of thorax" EXACT []
synonym: "front of thorax" EXACT []
synonym: "thoracic body wall" RELATED []
xref: FMA:24216
xref: galen:Chest
xref: MA:0000031 ! chest
xref: OpenCyc:Mx4rvVikFZwpEbGdrcN5Y29ycA
is_a: UBERON:0000475 ! organism subdivision
relationship: part_of UBERON:0000915 ! thorax
xref: FMA:24816 ! Anterior chest
xref: ncithesaurus:Chest ! Chest

[Term]
id: UBERON:0001444
name: subdivision of head
alt_id: UBERON:FMA_24218-XAO_0000040
comment: This class was created automatically from a combination of ontologies
synonym: "Head region" EXACT []
synonym: "head region" EXACT []
synonym: "Head subdivision" EXACT []
synonym: "head subdivision" EXACT []
synonym: "Region of head" EXACT []
synonym: "region of head" EXACT []
synonym: "Subdivision of head" EXACT []
xref: FMA:24218 ! Subdivision of head
xref: XAO:0000040 ! head region
is_a: UBERON:0000475 ! organism subdivision
relationship: part_of UBERON:0000033 ! head

[Term]
id: UBERON:0001445
name: skeleton of foot
alt_id: UBERON:FMA_24222-MA_0000643
comment: This class was created automatically from a combination of ontologies
synonym: "foot bone" EXACT []
synonym: "Foot skeleton" EXACT []
synonym: "foot skeleton" EXACT []
synonym: "Set of bones of foot" EXACT []
synonym: "set of bones of foot" EXACT []
synonym: "Skeleton of foot" EXACT []
xref: FMA:24222 ! Skeleton of foot
xref: GAID:192 ! foot bone
xref: MA:0000643 ! foot bone
intersection_of: UBERON:0000075 ! subdivision of skeleton
intersection_of: part_of UBERON:0002387 ! foot
relationship: part_of UBERON:0002387 ! foot
xref: ncithesaurus:Foot_Bone ! Foot Bone

[Term]
id: UBERON:0001446
name: fibula
alt_id: UBERON:FMA_24479-MA_0001360
def: "." [Wikipedia:Fibula]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Fibula" EXACT []
xref: AAO:0000891 ! fibula
xref: FMA:24479 ! Fibula
xref: GAID:202 ! fibula
xref: galen:Fibula
xref: MA:0001360 ! fibula
is_a: UBERON:0001441 ! skeleton of lower limb
xref: ncithesaurus:Fibula ! Fibula
xref: BTO:0002346 ! fibula

[Term]
id: UBERON:0001447
name: tarsal bone
alt_id: UBERON:FMA_24491-MA_0000297
def: "." [Wikipedia:Ankle_bone]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Ankle bone" EXACT []
synonym: "ankle bone" EXACT []
synonym: "Bone of ankle" EXACT []
synonym: "bone of ankle" EXACT []
synonym: "Bone of tarsus" EXACT []
synonym: "bone of tarsus" EXACT []
synonym: "Tarsal bone" EXACT []
xref: FMA:24491 ! Tarsal bone
xref: GAID:194 ! tarsal bone
xref: MA:0000297 ! tarsal bone
is_a: UBERON:0001445 ! skeleton of foot
intersection_of: UBERON:0001474 ! bone
intersection_of: part_of UBERON:0002388 ! ankle
xref: ncithesaurus:Tarsal_Bone ! Tarsal Bone
xref: BTO:0002343 ! tarsal bone

[Term]
id: UBERON:0002374
name: metacarpal bone
alt_id: UBERON:FMA_9612-MA_0000302
def: "." [Wikipedia:Metacarpal_bone]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Metacarpal" EXACT []
synonym: "metacarpal" EXACT []
synonym: "Metacarpal bone" EXACT []
xref: FMA:9612 ! Metacarpal bone
xref: MA:0000302 ! metacarpal bone
xref: OpenCyc:Mx4rv1Bk45wpEbGdrcN5Y29ycA
is_a: UBERON:0001442 ! skeleton of hand
is_a: UBERON:0003821 ! metacarpal/metatarsal bone
xref: ncithesaurus:Metacarpal_Bone ! Metacarpal Bone

[Term]
id: UBERON:0001448
name: metatarsal bone
alt_id: UBERON:FMA_24492-MA_0000303
def: "." [Wikipedia:Metatarsal_bone]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Metatarsal bone" EXACT []
xref: FMA:24492 ! Metatarsal bone
xref: GAID:193 ! metatarsal bone
xref: MA:0000303 ! metatarsal bone
is_a: UBERON:0001445 ! skeleton of foot
is_a: UBERON:0003821 ! metacarpal/metatarsal bone
relationship: part_of UBERON:0000983 ! metatarsus
xref: ncithesaurus:Metatarsal_Bone ! Metatarsal Bone
xref: BTO:0002347 ! metatarsal bone

[Term]
id: UBERON:0003821 ! metacarpal/metatarsal bone
name: metacarpal/metatarsal bone
synonym: "metacarpal/metatarsal" EXACT []
synonym: "metacarpal or metatarsal bone" EXACT []
union_of: UBERON:0001448
union_of: UBERON:0002374
xref: MA:0000301 ! metacarpal/metatarsal bone


[Term]
id: UBERON:0001450
name: calcaneus
alt_id: UBERON:FMA_24496-MA_0001348
def: "." [Wikipedia:Calcaneus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "calcaneum" EXACT []
synonym: "Calcaneus" EXACT []
synonym: "fibulare" RELATED []
synonym: "Os calcis" EXACT []
synonym: "os calcis" EXACT []
xref: FMA:24496 ! Calcaneus
xref: galen:Calcaneum
xref: MA:0001348 ! calcaneum
is_a: UBERON:0001447 ! tarsal bone
xref: ncithesaurus:Calcaneum ! Calcaneum

[Term]
id: UBERON:0001451
name: navicular bone of foot
alt_id: UBERON:FMA_24499-MA_0001349
def: "." [Wikipedia:Navicular]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "central tarsal bone" RELATED []
synonym: "centrale" RELATED []
synonym: "Navicular" EXACT []
synonym: "navicular" EXACT []
synonym: "Navicular bone of foot" EXACT []
synonym: "Navicular of foot" EXACT []
synonym: "navicular of foot" EXACT []
xref: FMA:24499 ! Navicular bone of foot
xref: MA:0001349 ! navicular
xref: OpenCyc:Mx4rv67esJwpEbGdrcN5Y29ycA
is_a: UBERON:0001447 ! tarsal bone

[Term]
id: UBERON:0001452
name: medial cuneiform bone
alt_id: UBERON:FMA_24518-MA_0001352
def: "." [Wikipedia:Medial_cuneiform_bone]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "First cuneiform bone" EXACT []
synonym: "first cuneiform bone" EXACT []
synonym: "foot distal carpal bone 1" RELATED []
synonym: "Medial cuneiform" EXACT []
synonym: "medial cuneiform" EXACT []
synonym: "Medial cuneiform bone" EXACT []
xref: FMA:24518 ! Medial cuneiform bone
xref: MA:0001352 ! medial cuneiform
xref: OpenCyc:Mx4rvYtfH5wpEbGdrcN5Y29ycA
is_a: UBERON:0001447 ! tarsal bone
xref: BTO:0002360 ! medial cuneiform bone

[Term]
id: UBERON:0001453
name: intermediate cuneiform bone
alt_id: UBERON:FMA_24519-MA_0001353
def: "." [Wikipedia:Intermediate_cuneiform_bone]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "foot distal carpal bone 2" RELATED []
synonym: "Intermediate cuneiform" EXACT []
synonym: "intermediate cuneiform" EXACT []
synonym: "Intermediate cuneiform bone" EXACT []
synonym: "Middle cuneiform" EXACT []
synonym: "middle cuneiform" EXACT []
synonym: "Second cuneiform bone" EXACT []
synonym: "second cuneiform bone" EXACT []
synonym: "Second cuneiform bone of foot" EXACT []
synonym: "second cuneiform bone of foot" EXACT []
xref: FMA:24519 ! Intermediate cuneiform bone
xref: galen:IntermediateCuneiform
xref: MA:0001353 ! intermediate cuneiform
is_a: UBERON:0001447 ! tarsal bone
xref: BTO:0002359 ! intermediate cuneiform bone

[Term]
id: UBERON:0001454
name: lateral cuneiform bone
alt_id: UBERON:FMA_24520-MA_0001354
def: "." [Wikipedia:Lateral_cuneiform_bone]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "foor distal carpal bone 3" RELATED []
synonym: "Lateral cuneiform" EXACT []
synonym: "lateral cuneiform" EXACT []
synonym: "Lateral cuneiform bone" EXACT []
synonym: "Third cuneiform bone" EXACT []
synonym: "third cuneiform bone" EXACT []
xref: FMA:24520 ! Lateral cuneiform bone
xref: galen:LateralCuneiform
xref: MA:0001354 ! lateral cuneiform
is_a: UBERON:0001447 ! tarsal bone
xref: BTO:0002358 ! lateral cuneiform bone

[Term]
id: UBERON:0001455
name: cuboid bone
alt_id: UBERON:FMA_24527-MA_0001355
def: "." [Wikipedia:Cuboid_bone]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Cuboid" EXACT []
synonym: "cuboid" EXACT []
synonym: "Cuboid bone" EXACT []
synonym: "foot distal carpal bone 4 and 5" RELATED []
xref: FMA:24527 ! Cuboid bone
xref: galen:Cuboid
xref: MA:0001355 ! cuboid
is_a: UBERON:0001447 ! tarsal bone
xref: ncithesaurus:Cuboid_Bone ! Cuboid Bone
xref: BTO:0002357 ! cuboid bone

[Term]
id: UBERON:0001456
name: face
alt_id: UBERON:FMA_24728-MA_0002473
def: "Subdivision of head which consists of the viscerocranium and all layers superficial to it. Examples: There is only one face." [Wikipedia:Face]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Face" EXACT []
xref: FMA:24728 ! Face
xref: GAID:64 ! face
xref: galen:Face
xref: HAO:0000316 ! face
xref: MA:0002473 ! face
xref: OpenCyc:Mx4rvVi5GZwpEbGdrcN5Y29ycA
is_a: UBERON:0001444 ! subdivision of head
xref: ncithesaurus:Face ! Face
xref: BTO:0003369 ! face

[Term]
id: UBERON:0001457
name: skin of eyelid
alt_id: UBERON:FMA_24760-MA_0001256
comment: This class was created automatically from a combination of ontologies
synonym: "Eyelid skin" EXACT []
synonym: "eyelid skin" EXACT []
synonym: "Skin of eyelid" EXACT []
xref: FMA:24760 ! Skin of eyelid
xref: MA:0001256 ! eyelid skin
is_a: UBERON:0000014 ! zone of skin
intersection_of: UBERON:0000014 ! zone of skin
intersection_of: part_of UBERON:0001711 ! eyelid
relationship: part_of UBERON:0001711 ! eyelid
xref: ncithesaurus:Eyelid_Skin ! Eyelid Skin

[Term]
id: UBERON:0001458
name: skin of lip
alt_id: UBERON:FMA_24764-MA_0001579
comment: This class was created automatically from a combination of ontologies
synonym: "Lip skin" EXACT []
synonym: "lip skin" EXACT []
synonym: "Skin of lip" EXACT []
xref: FMA:24764 ! Skin of lip
xref: MA:0001579 ! lip skin
is_a: UBERON:0000014 ! zone of skin
intersection_of: UBERON:0000014 ! zone of skin
intersection_of: part_of UBERON:0001833 ! lip

[Term]
id: UBERON:0001459
name: skin of external ear
alt_id: UBERON:FMA_24775-MA_0001233
comment: This class was created automatically from a combination of ontologies
synonym: "ear skin" EXACT []
synonym: "External ear skin" EXACT []
synonym: "external ear skin" EXACT []
synonym: "Skin of external ear" EXACT []
xref: FMA:24775 ! Skin of external ear
xref: MA:0001233 ! ear skin
is_a: UBERON:0000014 ! zone of skin
intersection_of: UBERON:0000014 ! zone of skin
intersection_of: part_of UBERON:0001691 ! external ear
relationship: part_of UBERON:0001757 ! pinna
xref: ncithesaurus:Ear_Skin ! Ear Skin

[Term]
id: UBERON:0001460
name: arm
alt_id: UBERON:FMA_24890-MA_0000033
def: "In humans, the arms are the two upper limbs of the body from the shoulder to the hand[GO]." [Wikipedia:Arm]
comment: TODO -- resolve ambiguity -- In anatomy, an arm is one of the upper limbs of an animal. The term arm can also be used for analogous structures, such as one of the paired upper limbs of a four-legged animal, or the arms of cephalopods. In the lexicon of human anatomy, the term arm refers specifically to the segment between the shoulder and the elbow. The segment between the elbow and wrist is the forearm. However, in colloquial speech the term arm often refers to the entire upper limb from shoulder to wrist.
subset: uberon_slim
synonym: "Arm" EXACT []
synonym: "Brachial region" EXACT []
synonym: "brachial region" EXACT []
synonym: "Proximal segment of free upper limb" EXACT []
synonym: "proximal segment of free upper limb" EXACT []
xref: EHDAA:4164 ! arm
xref: EHDAA:6210 ! arm
xref: EHDAA:8275 ! arm
xref: FMA:24890 ! Arm
xref: GAID:52 ! arm
xref: galen:Arm
xref: HOG:0000339 ! arm
xref: MA:0000033 ! arm
xref: OpenCyc:Mx4rvVjp5ZwpEbGdrcN5Y29ycA
is_a: UBERON:0002529 ! limb segment
relationship: part_of UBERON:0002102 ! forelimb
xref: ncithesaurus:Arm ! Arm
xref: BTO:0001435 ! arm

[Term]
id: UBERON:0001461
name: elbow
alt_id: UBERON:FMA_24901-MA_0000036
def: "." [Wikipedia:Elbow]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Cubital region" EXACT []
synonym: "cubital region" EXACT []
synonym: "Elbow" EXACT []
xref: EHDAA:4166 ! elbow
xref: EHDAA:6212 ! elbow
xref: FMA:24901 ! Elbow
xref: GAID:54 ! elbow
xref: galen:Elbow
xref: HOG:0000340 ! elbow
xref: MA:0000036 ! elbow
xref: OpenCyc:Mx4rvVjjNZwpEbGdrcN5Y29ycA
is_a: UBERON:0002529 ! limb segment
relationship: part_of UBERON:0001460 ! arm

[Term]
id: UBERON:0001462
name: wrist
alt_id: UBERON:FMA_24922-MA_0000039
def: "." [Wikipedia:Wrist]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Carpal region" EXACT []
synonym: "carpal region" EXACT []
synonym: "Wrist" EXACT []
xref: EHDAA:5196 ! carpal region
xref: FMA:24922 ! Wrist
xref: GAID:59 ! wrist
xref: MA:0000039 ! wrist
xref: OpenCyc:Mx4rvVjncpwpEbGdrcN5Y29ycA
is_a: UBERON:0002529 ! limb segment
relationship: part_of UBERON:0001460 ! arm

[Term]
id: UBERON:0001463
name: hand digit 1
alt_id: UBERON:FMA_24938-MA_0000454
def: "lateral-most digit of the hand in mouse and human[Wikipedia]." [Wikipedia:Thumb]
comment: This class represents all instances of the first digit of the hand in human and mouse, and all homologues of this digit in other vertebrates. See http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2553264/
subset: uberon_slim
synonym: "First digit of hand" EXACT []
synonym: "first digit of hand" EXACT []
synonym: "Pollex; Digitus primus [I]" EXACT []
synonym: "pollex; digitus primus [i]" EXACT []
synonym: "thumb" EXACT []
xref: FMA:24938 ! Thumb
xref: GAID:58 ! thumb
xref: MA:0000454 ! hand digit 1
xref: OpenCyc:Mx4rvVjVbpwpEbGdrcN5Y29ycA
is_a: UBERON:0002389 ! finger
xref: ncithesaurus:Hand_Digit_1 ! Hand Digit 1

[Term]
id: UBERON:0001464
name: hip
alt_id: UBERON:FMA_24964-MA_0000045
def: "." [Wikipedia:Hip]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Hip" EXACT []
synonym: "Hip region" EXACT []
synonym: "hip region" EXACT []
synonym: "Regio coxae" EXACT []
synonym: "regio coxae" EXACT []
xref: EHDAA:5153 ! hip
xref: EHDAA:6178 ! hip
xref: FMA:24964 ! Hip
xref: GAID:47 ! hip
xref: galen:Hip
xref: HOG:0000346 ! hip
xref: MA:0000045 ! hip
xref: OpenCyc:Mx4rvVjhy5wpEbGdrcN5Y29ycA
is_a: UBERON:0002529 ! limb segment
relationship: part_of UBERON:0001271 ! pelvic girdle
xref: ncithesaurus:Hip ! Hip
xref: BTO:0001457 ! hip

[Term]
id: UBERON:0001465
name: knee
alt_id: UBERON:FMA_24974-MA_0000046
def: "." [Wikipedia:Knee]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Knee" EXACT []
xref: EHDAA:5159 ! knee
xref: EHDAA:6184 ! knee
xref: FMA:24974 ! Knee
xref: GAID:48 ! knee
xref: galen:Knee
xref: HOG:0000347 ! knee
xref: MA:0000046 ! knee
xref: OpenCyc:Mx4rvVjPKZwpEbGdrcN5Y29ycA
is_a: UBERON:0002529 ! limb segment
relationship: part_of UBERON:0002103 ! hindlimb
xref: BTO:0003595 ! knee

[Term]
id: UBERON:0001466
name: toe
alt_id: UBERON:FMA_25046-MA_0000048
def: "A digit that is part_of a foot[Obol]." [Wikipedia:Toe]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Digit of foot" EXACT []
synonym: "digit of foot" EXACT []
synonym: "Digitus pedis" EXACT []
synonym: "digitus pedis" EXACT []
synonym: "foot digit" EXACT []
synonym: "Toe" EXACT []
xref: FMA:25046 ! Toe
xref: GAID:44 ! toe
xref: MA:0000048 ! foot digit
xref: OpenCyc:Mx4rvVjCHZwpEbGdrcN5Y29ycA
is_a: UBERON:0000027 ! hind digit
intersection_of: UBERON:0002544 ! digit
intersection_of: part_of UBERON:0002387 ! foot
relationship: part_of UBERON:0002387 ! foot
xref: ncithesaurus:Toe ! Toe
xref: BTO:0002348 ! toe

[Term]
id: UBERON:0001467
name: shoulder
alt_id: UBERON:FMA_25202-MA_0000038
def: "." [Wikipedia:Shoulder]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Shoulder" EXACT []
xref: EHDAA:4180 ! shoulder
xref: EHDAA:6228 ! shoulder
xref: FMA:25202 ! Shoulder
xref: GAID:60 ! shoulder
xref: HOG:0000342 ! shoulder
xref: MA:0000038 ! shoulder
xref: OpenCyc:Mx4rvViCM5wpEbGdrcN5Y29ycA
is_a: UBERON:0002529 ! limb segment
relationship: part_of UBERON:0001421 ! pectoral girdle
xref: ncithesaurus:Shoulder ! Shoulder

[Term]
id: UBERON:0001468
name: intervertebral symphysis
alt_id: UBERON:FMA_25511-MA_0001514
comment: This class was created automatically from a combination of ontologies
synonym: "Intervertebral symphysis" EXACT []
synonym: "Joint of vertebral body" EXACT []
synonym: "joint of vertebral body" EXACT []
xref: FMA:25511 ! Intervertebral symphysis
xref: MA:0001514 ! joint of vertebral body
is_a: UBERON:0002216 ! symphysis
relationship: part_of UBERON:0001130 ! vertebral column

[Term]
id: UBERON:0001469
name: sternoclavicular joint
alt_id: UBERON:FMA_25883-MA_0001507
def: "." [Wikipedia:Sternoclavicular_joint]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Sternoclavicular joint" EXACT []
xref: FMA:25883 ! Sternoclavicular joint
xref: GAID:270 ! sternoclavicular joint
xref: MA:0001507 ! sternoclavicular joint
xref: OpenCyc:Mx4rv_eLJZwpEbGdrcN5Y29ycA
is_a: UBERON:0000982 ! joint
xref: ncithesaurus:Sternoclavicular_Joint ! Sternoclavicular Joint

[Term]
id: UBERON:0001470
name: glenohumeral joint
alt_id: UBERON:FMA_25912-MA_0000459
def: "." [Wikipedia:Glenohumeral_joint]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Glenohumeral joint" EXACT []
synonym: "Humeral joint" EXACT []
synonym: "humeral joint" EXACT []
synonym: "Shoulder joint" EXACT []
synonym: "shoulder joint" EXACT []
xref: FMA:25912 ! Glenohumeral joint
xref: GAID:269 ! shoulder joint
xref: HOG:0001002 ! shoulder joint
xref: MA:0000459 ! shoulder joint
is_a: UBERON:0002217 ! synovial joint
intersection_of: UBERON:0000982 ! joint
intersection_of: part_of UBERON:0001467 ! shoulder
relationship: part_of UBERON:0001467 ! shoulder
xref: ncithesaurus:Shoulder_Joint ! Shoulder Joint

[Term]
id: UBERON:0001471
name: skin of prepuce of penis
alt_id: UBERON:FMA_27648-MA_0001744
comment: This class was created automatically from a combination of ontologies
synonym: "Foreskin of penis" EXACT []
synonym: "foreskin of penis" EXACT []
synonym: "penis foreskin" EXACT []
synonym: "Preputial skin" EXACT []
synonym: "preputial skin" EXACT []
synonym: "Skin of prepuce of penis" EXACT []
xref: FMA:27648 ! Skin of prepuce of penis
xref: HOG:0001342 ! penis foreskin
xref: MA:0001744 ! penis foreskin
is_a: UBERON:0000014 ! zone of skin
intersection_of: UBERON:0000014 ! zone of skin
intersection_of: part_of UBERON:0001332 ! prepuce of penis

[Term]
id: UBERON:0001472
name: vaginal venous plexus
alt_id: UBERON:FMA_29713-MA_0002257
def: "." [Wikipedia:Vaginal_venous_plexus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Vaginal venous plexus" EXACT []
synonym: "venous vaginal plexus" EXACT []
xref: FMA:29713 ! Vaginal venous plexus
xref: MA:0002257 ! venous vaginal plexus
is_a: UBERON:0001593 ! venous plexus
intersection_of: UBERON:0001593 ! venous plexus
intersection_of: part_of UBERON:0000996 ! vagina

[Term]
id: UBERON:0001473
name: lymphatic vessel
alt_id: UBERON:FMA_30315-FMA_5034-MA_0000138-MA_0000139-MIAA_0000197-XAO_0000375-ZFA_0005105
def: "Segment of lymphatic tree organ, the wall and lumen of which are continuous with those of the veins, directly or indirectly; together with other lymphatic vessels and lymph nodes, it constitutes the lymphatic tree organ. Examples: bronchomediastinal lymph duct, thoracic duct. // A vessel that contains or conveys lymph. // A network of blunt ended vessels lacking direct connection to the blood vascular system. These vessels collect and drain fluids and macromolecules from interstitial spaces throughout the animal. They derive from a subpopulation of endothelial cells and have walls that are much thinner than the blood carrying vessels. Lymphatic vessels are usually classified as either superficial or deep." [BTO:0000752, Wikipedia:Lymphatic_vessel, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Lymph vessel" EXACT []
synonym: "lymph vessel" EXACT []
synonym: "lymphatic system" RELATED []
synonym: "Lymphatic vessel" EXACT []
xref: BTO:0000752
xref: EFO:0000873 ! lymph vessel
xref: EHDAA:8677 ! lymphatic system
xref: FMA:30315 ! Lymphatic vessel
xref: HOG:0001249 ! lymph vessel
xref: MA:0000138 ! lymphatic vessel
xref: MAT:0000197 ! lymphatic system
xref: MAT:0000443 ! lymph vessel
xref: TAO:0005105 ! lymph vessel
xref: XAO:0000375 ! lymph vessel
xref: ZFA:0005105 ! lymph vessel
is_a: UBERON:0000055 ! vessel
disjoint_from: UBERON:0001981 ! blood vessel
relationship: has_part UBERON:0002391 ! lymph
relationship: part_of UBERON:0002049 ! vasculature
relationship: part_of UBERON:0002465 ! lymphoid system
xref: ncithesaurus:Lymphatic_Vessel ! Lymphatic Vessel

[Term]
id: UBERON:0001474
name: bone
alt_id: UBERON:FMA_30317-MA_0001459-MIAA_0000299-XAO_0000169-ZFA_0001514
def: "The hard form of connective tissue that constitutes the majority of the skeleton. // Portion of tissue which is calcified connective tissue making up the structural elements of the skeletal system. Organ with cavitated organ parts, which primarily consists of compact (cortical) and cancellous bone, which surround bone marrow cavities; together with other bones, cartilages and joints, it constitutes the skeletal system. Examples: femur, sternum, maxilla, vertebra, talus[FMA]" [BTO:0000140, FMA:5018, Wikipedia:Bone, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "bone organ" EXACT []
xref: AAO:0000047 ! bone
xref: BTO:0000140
xref: EFO:0000298 ! bone
xref: ENVO:00002039
xref: FMA:5018 ! Bone organ
xref: GAID:92 ! bone
xref: galen:Bone
xref: HOG:0001190 ! bone
xref: MA:0001459 ! bone
xref: MAT:0000299 ! bone
xref: MIAA:0000299 ! bone
xref: ncithesaurus:Bone
xref: OpenCyc:Mx4rvViDlpwpEbGdrcN5Y29ycA
xref: OpenCyc:Mx4rvVkCG5wpEbGdrcN5Y29ycA
xref: TAO:0001514 ! bone
xref: XAO:0000169 ! bone
xref: ZFA:0001514 ! bone
is_a: UBERON:0000479 ! portion of tissue
relationship: part_of UBERON:0001434 ! skeleton

[Term]
id: UBERON:0001475
name: ligament
alt_id: UBERON:FMA_30319-FMA_76821-MA_0000113-MIAA_0000113
comment: made obsolete as it incorrectly grouped classes
is_obsolete: true
consider: UBERON:0000211
consider: UBERON:0002360

[Term]
id: UBERON:0001476
name: deltoid
alt_id: UBERON:FMA_32521-MA_0002286
def: "Intrinsic muscle of shoulder which attaches to the spine of scapula, clavicle and humerus." [Wikipedia:Deltoid]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Deltoid" EXACT []
xref: FMA:32521 ! Deltoid
xref: HOG:0000846 ! deltoid
xref: MA:0002286 ! deltoid
xref: OpenCyc:Mx4rvVjdc5wpEbGdrcN5Y29ycA
is_a: UBERON:0001482 ! muscle of shoulder
xref: ncithesaurus:Deltoid ! Deltoid

[Term]
id: UBERON:0001477
name: infraspinatus muscle
alt_id: UBERON:FMA_32546-MA_0002323
def: "." [Wikipedia:Infraspinatus_muscle]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Infraspinatus" EXACT []
synonym: "infraspinatus" EXACT []
synonym: "Infraspinatus muscle" EXACT []
xref: EHDAA:8305 ! infraspinatus
xref: FMA:32546 ! Infraspinatus muscle
xref: HOG:0000921 ! infraspinatus
xref: MA:0002323 ! infraspinatus
is_a: UBERON:0001482 ! muscle of shoulder
xref: ncithesaurus:Infraspinatus ! Infraspinatus

[Term]
id: UBERON:0001478
name: teres major
alt_id: UBERON:FMA_32549-MA_0002392
def: "." [Wikipedia:Teres_major]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Teres major" EXACT []
synonym: "Teres major muscle" EXACT []
synonym: "teres major muscle" EXACT []
xref: EHDAA:8321 ! teres major
xref: FMA:32549 ! Teres major
xref: HOG:0000750 ! teres major
xref: MA:0002392 ! teres major
is_a: UBERON:0001482 ! muscle of shoulder
xref: ncithesaurus:Teres_Major_Muscle ! Teres Major Muscle

[Term]
id: UBERON:0001479
name: sesamoid bone
alt_id: UBERON:FMA_32672-MA_0001375
def: "." [Wikipedia:Sesamoid_bone]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Sesamoid bone" EXACT []
xref: FMA:32672 ! Sesamoid bone
xref: GAID:210 ! sesamoid bone
xref: MA:0001375 ! sesamoid bone
is_a: UBERON:0002428 ! limb bone
xref: ncithesaurus:Sesamoid_Bone ! Sesamoid Bone

[Term]
id: UBERON:0001480
name: proximal carpal bone
alt_id: UBERON:FMA_33302-MA_0002557
comment: This class was created automatically from a combination of ontologies
synonym: "Proximal carpal bone" EXACT []
xref: FMA:33302 ! Proximal carpal bone
xref: MA:0002557 ! proximal carpal bone
is_a: UBERON:0001435 ! carpal bone

[Term]
id: UBERON:0001481
name: distal carpal bone
alt_id: UBERON:FMA_33303-MA_0002558
comment: This class was created automatically from a combination of ontologies
synonym: "Distal carpal bone" EXACT []
xref: FMA:33303 ! Distal carpal bone
xref: MA:0002558 ! distal carpal bone
is_a: UBERON:0001435 ! carpal bone

[Term]
id: UBERON:0001482
name: muscle of shoulder
alt_id: UBERON:FMA_33531-MA_0000633
comment: This class was created automatically from a combination of ontologies
synonym: "Muscle of shoulder" EXACT []
synonym: "Shoulder muscle" EXACT []
synonym: "shoulder muscle" EXACT []
xref: FMA:33531 ! Muscle of shoulder
xref: MA:0000633 ! shoulder muscle
intersection_of: UBERON:0001630 ! muscle organ
intersection_of: part_of UBERON:0001467 ! shoulder
relationship: part_of UBERON:0001467 ! shoulder

[Term]
id: UBERON:0001483
name: skin of shoulder
alt_id: UBERON:FMA_34830-MA_0000635
comment: This class was created automatically from a combination of ontologies
synonym: "Shoulder skin" EXACT []
synonym: "shoulder skin" EXACT []
synonym: "Skin of shoulder" EXACT []
xref: FMA:34830 ! Skin of shoulder
xref: MA:0000635 ! shoulder skin
is_a: UBERON:0001419 ! skin of limb
intersection_of: UBERON:0000014 ! zone of skin
intersection_of: part_of UBERON:0001467 ! shoulder
relationship: part_of UBERON:0001419 ! skin of limb
relationship: part_of UBERON:0001467 ! shoulder

[Term]
id: UBERON:0001484
name: articular capsule
alt_id: UBERON:FMA_34836-MA_0001519
def: "." [Wikipedia:Articular_capsule]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Articular capsule" EXACT []
synonym: "Fibrous capsule of joint" EXACT []
synonym: "fibrous capsule of joint" EXACT []
synonym: "Joint capsule" EXACT []
synonym: "joint capsule" EXACT []
synonym: "joint fibrous capsule" EXACT []
xref: FMA:34836 ! Articular capsule
xref: GAID:263 ! joint capsule
xref: galen:JointCapsule
xref: MA:0001519 ! joint fibrous capsule
is_a: UBERON:0000062 ! organ
relationship: part_of UBERON:0002217 ! synovial joint

[Term]
id: UBERON:0001485
name: knee joint
alt_id: UBERON:FMA_35175-MA_0000471
def: "." [Wikipedia:Knee_joint]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Knee joint" EXACT []
xref: FMA:35175 ! Knee joint
xref: GAID:114 ! knee joint
xref: galen:KneeJoint
xref: HOG:0001003 ! knee joint
xref: MA:0000471 ! knee joint
is_a: UBERON:0002217 ! synovial joint
intersection_of: UBERON:0000982 ! joint
intersection_of: part_of UBERON:0001465 ! knee
relationship: part_of UBERON:0001465 ! knee
xref: ncithesaurus:Knee_Joint ! Knee Joint

[Term]
id: UBERON:0001486
name: hip joint
alt_id: UBERON:FMA_35178-MA_0000470
def: "." [Wikipedia:Hip_joint]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Articulatio coxofemoralis" EXACT []
synonym: "articulatio coxofemoralis" EXACT []
synonym: "Hip joint" EXACT []
xref: FMA:35178 ! Hip joint
xref: GAID:262 ! hip joint
xref: galen:HipJoint
xref: HOG:0001001 ! hip joint
xref: MA:0000470 ! hip joint
is_a: UBERON:0002217 ! synovial joint
intersection_of: UBERON:0000982 ! joint
intersection_of: part_of UBERON:0001464 ! hip
relationship: part_of UBERON:0001464 ! hip
xref: ncithesaurus:Hip_Joint ! Hip Joint
xref: BTO:0001502 ! hip joint

[Term]
id: UBERON:0001487
name: joint of foot
alt_id: UBERON:FMA_35194-MA_0000464
comment: This class was created automatically from a combination of ontologies
synonym: "Foot joint" EXACT []
synonym: "foot joint" EXACT []
synonym: "Joint of foot" EXACT []
xref: FMA:35194
xref: GAID:256 ! foot joint
xref: MA:0000464 ! foot joint
is_a: UBERON:0002217 ! synovial joint
intersection_of: UBERON:0000982 ! joint
intersection_of: part_of UBERON:0002387 ! foot
relationship: part_of UBERON:0002387 ! foot
xref: FMA:71349 ! Set of joints of foot

[Term]
id: UBERON:0001488
name: ankle joint
alt_id: UBERON:FMA_35195-MA_0000463
def: "." [Wikipedia:Ankle_joint]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Ankle joint" EXACT []
synonym: "Talocrural joint" EXACT []
synonym: "talocrural joint" EXACT []
xref: FMA:35195 ! Ankle joint
xref: GAID:257 ! ankle joint
xref: galen:AnkleJoint
xref: MA:0000463 ! ankle joint
is_a: UBERON:0001487 ! joint of foot
intersection_of: UBERON:0000982 ! joint
intersection_of: part_of UBERON:0002388 ! ankle
relationship: part_of UBERON:0002388 ! ankle
xref: ncithesaurus:Ankle_Joint ! Ankle Joint

[Term]
id: UBERON:0001489
name: joint of hand
alt_id: UBERON:FMA_35245-MA_0000452
comment: This class was created automatically from a combination of ontologies
synonym: "Hand joint" EXACT []
synonym: "hand joint" EXACT []
synonym: "Joint of hand" EXACT []
xref: FMA:35245
xref: MA:0000452 ! hand joint
is_a: UBERON:0002217 ! synovial joint
intersection_of: UBERON:0000982 ! joint
intersection_of: part_of UBERON:0002398 ! hand
relationship: part_of UBERON:0002398 ! hand
xref: FMA:71345 ! Set of joints of hand

[Term]
id: UBERON:0001490
name: elbow joint
alt_id: UBERON:FMA_35289-MA_0000451
def: "." [Wikipedia:Elbow_joint]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Elbow joint" EXACT []
xref: FMA:35289 ! Elbow joint
xref: GAID:253 ! elbow joint
xref: galen:ElbowJoint
xref: HOG:0000997 ! elbow joint
xref: MA:0000451 ! elbow joint
is_a: UBERON:0002217 ! synovial joint
intersection_of: UBERON:0000982 ! joint
intersection_of: part_of UBERON:0001461 ! elbow
relationship: part_of UBERON:0001461 ! elbow
xref: ncithesaurus:Elbow_Joint ! Elbow Joint

[Term]
id: UBERON:0001491
name: wrist joint
alt_id: UBERON:FMA_35291-MA_0000460
def: "." [Wikipedia:Wrist_joint]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Joint of wrist" EXACT []
synonym: "joint of wrist" EXACT []
synonym: "Radiocarpal joint" EXACT []
synonym: "radiocarpal joint" EXACT []
synonym: "Wrist joint" EXACT []
xref: FMA:35291 ! Wrist joint
xref: GAID:274 ! wrist joint
xref: MA:0000460 ! wrist joint
xref: OpenCyc:Mx4rvZD2PJwpEbGdrcN5Y29ycA
is_a: UBERON:0001489 ! joint of hand
intersection_of: UBERON:0000982 ! joint
intersection_of: part_of UBERON:0001462 ! wrist
relationship: part_of UBERON:0001462 ! wrist
xref: ncithesaurus:Wrist_Joint ! Wrist Joint

[Term]
id: UBERON:0001492
name: radial nerve
alt_id: UBERON:FMA_37069-MA_0001171
def: "." [Wikipedia:Radial_nerve]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Radial nerve" EXACT []
xref: EHDAA:5650 ! radial nerve
xref: FMA:37069 ! Radial nerve
xref: GAID:845 ! radial nerve
xref: HOG:0000896 ! radial nerve
xref: MA:0001171 ! radial nerve
xref: OpenCyc:Mx4rvfk7E5wpEbGdrcN5Y29ycA
is_a: UBERON:0002003 ! peripheral nerve
relationship: part_of UBERON:0001460 ! arm
relationship: part_of UBERON:0001814 ! brachial nerve plexus
xref: ncithesaurus:Radial_Nerve ! Radial Nerve

[Term]
id: UBERON:0001493
name: axillary nerve
alt_id: UBERON:FMA_37072-MA_0001166
def: "." [Wikipedia:Axillary_nerve]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Axillary nerve" EXACT []
synonym: "Circumflex humeral nerve" EXACT []
synonym: "circumflex humeral nerve" EXACT []
xref: FMA:37072 ! Axillary nerve
xref: MA:0001166 ! axillary nerve
xref: OpenCyc:Mx4rvgwMfpwpEbGdrcN5Y29ycA
is_a: UBERON:0002003 ! peripheral nerve
relationship: part_of UBERON:0001460 ! arm
relationship: part_of UBERON:0001467 ! shoulder
relationship: part_of UBERON:0001814 ! brachial nerve plexus
xref: ncithesaurus:Axillary_Nerve ! Axillary Nerve

[Term]
id: UBERON:0001494
name: ulnar nerve
alt_id: UBERON:FMA_37319-MA_0001174
def: "." [Wikipedia:Ulnar_nerve]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Ulnar nerve" EXACT []
xref: FMA:37319 ! Ulnar nerve
xref: GAID:846 ! ulnar nerve
xref: HOG:0000922 ! ulnar nerve
xref: MA:0001174 ! ulnar nerve
is_a: UBERON:0002003 ! peripheral nerve
relationship: part_of UBERON:0001460 ! arm
relationship: part_of UBERON:0001814 ! brachial nerve plexus
xref: ncithesaurus:Ulnar_Nerve ! Ulnar Nerve

[Term]
id: UBERON:0001495
name: pectoral muscle
alt_id: UBERON:FMA_37349-MA_0002423
def: "." [Wikipedia:Pectoral_muscle]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Muscle of pectoral part of chest" EXACT []
synonym: "muscle of pectoral part of chest" EXACT []
synonym: "Muscle of pectoral region" EXACT []
synonym: "muscle of pectoral region" EXACT []
synonym: "Pectoral muscle" EXACT []
synonym: "pectoralis muscle" EXACT []
xref: BTO:0000023
xref: FMA:37349 ! Pectoral muscle
xref: GAID:153 ! pectoralis muscle
xref: MA:0002423 ! pectoralis muscle
is_a: UBERON:0001630 ! muscle organ
xref: ncithesaurus:Pectoralis_Muscle ! Pectoralis Muscle

[Term]
id: UBERON:0001496
name: ascending aorta
alt_id: UBERON:FMA_3736-MA_0002570
def: "a portion of the aorta commencing at the upper part of the base of the left ventricle, on a level with the lower border of the third costal cartilage behind the left half of the sternum; it passes obliquely upward, forward, and to the right, in the direction of the heart’s axis, as high as the upper border of the second right costal cartilage, describing a slight curve in its course, and being situated, about 6 cm behind the posterior surface of the sternum. The total length is about 5 cm in length [Wikipedia]" [Wikipedia:Ascending_aorta]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Ascending aorta" EXACT []
synonym: "Pars ascendens aortae" EXACT []
synonym: "pars ascendens aortae" EXACT []
xref: FMA:3736 ! Ascending aorta
xref: MA:0002570 ! ascending aorta
is_a: UBERON:0000063 ! organ segment
relationship: part_of UBERON:0001515 ! thoracic aorta
xref: ncithesaurus:Ascending_Aorta ! Ascending Aorta

[Term]
id: UBERON:0001497
name: muscle of pelvic girdle
alt_id: UBERON:FMA_37367-MA_0000537
comment: This class was created automatically from a combination of ontologies
synonym: "Muscle of pelvic girdle" EXACT []
synonym: "Pelvic girdle muscle" EXACT []
synonym: "pelvic girdle muscle" EXACT []
xref: AAO:0000427 ! pelvic_girdle_muscles
xref: FMA:37367 ! Muscle of pelvic girdle
xref: MA:0000537 ! pelvic girdle muscle
is_a: UBERON:0001325 ! muscle of pelvis
intersection_of: UBERON:0001630 ! muscle organ
intersection_of: part_of UBERON:0001271 ! pelvic girdle

[Term]
id: UBERON:0001498
name: muscle of foot
alt_id: UBERON:FMA_37369-MA_0000652
comment: This class was created automatically from a combination of ontologies
synonym: "Foot muscle" EXACT []
synonym: "foot muscle" EXACT []
synonym: "Muscle of foot" EXACT []
xref: BTO:0000477
xref: FMA:37369 ! Muscle of foot
xref: MA:0000652 ! foot muscle
intersection_of: UBERON:0001630 ! muscle organ
intersection_of: part_of UBERON:0002387 ! foot
relationship: part_of UBERON:0002387 ! foot

[Term]
id: UBERON:0001499
name: muscle of arm
alt_id: UBERON:FMA_37370-MA_0000594
comment: This class was created automatically from a combination of ontologies
synonym: "Arm muscle" EXACT []
synonym: "arm muscle" EXACT []
synonym: "Muscle of arm" EXACT []
xref: FMA:37370 ! Muscle of arm
xref: MA:0000594 ! arm muscle
intersection_of: UBERON:0001630 ! muscle organ
intersection_of: part_of UBERON:0001460 ! arm
relationship: part_of UBERON:0001460 ! arm

[Term]
id: UBERON:0001500
name: muscle of hand
alt_id: UBERON:FMA_37372-MA_0000628
comment: This class was created automatically from a combination of ontologies
synonym: "Hand muscle" EXACT []
synonym: "hand muscle" EXACT []
synonym: "Muscle of hand" EXACT []
xref: FMA:37372 ! Muscle of hand
xref: MA:0000628 ! hand muscle
is_a: UBERON:0001630 ! muscle organ
intersection_of: UBERON:0001630 ! muscle organ
intersection_of: part_of UBERON:0002398 ! hand
relationship: part_of UBERON:0002398 ! hand

[Term]
id: UBERON:0001501
name: lumbrical of hand
alt_id: UBERON:FMA_37385-MA_0002316
comment: This class was created automatically from a combination of ontologies
synonym: "Hand lumbrical" EXACT []
synonym: "hand lumbrical" EXACT []
synonym: "hand lumbrical muscle" EXACT []
synonym: "Lumbrical of hand" EXACT []
xref: FMA:37385 ! Lumbrical of hand
xref: MA:0002316 ! hand lumbrical muscle
is_a: UBERON:0001500 ! muscle of hand

[Term]
id: UBERON:0001502
name: interosseous muscle of hand
alt_id: UBERON:FMA_37417-MA_0002313
comment: This class was created automatically from a combination of ontologies
synonym: "hand interosseous muscle" EXACT []
synonym: "Interosseous muscle of hand" EXACT []
xref: FMA:37417 ! Interosseous muscle of hand
xref: MA:0002313 ! hand interosseous muscle
is_a: UBERON:0001500 ! muscle of hand
xref: ncithesaurus:Hand_Interosseous_Muscle ! Hand Interosseous Muscle

[Term]
id: UBERON:0001503
name: dorsal interosseous of hand
alt_id: UBERON:FMA_37418-MA_0002314
comment: This class was created automatically from a combination of ontologies
synonym: "dorsal hand interosseus muscle" EXACT []
synonym: "Dorsal interosseous of hand" EXACT []
xref: FMA:37418 ! Dorsal interosseous of hand
xref: MA:0002314 ! dorsal hand interosseus muscle
is_a: UBERON:0001502 ! interosseous muscle of hand

[Term]
id: UBERON:0001504
name: lumbrical of foot
alt_id: UBERON:FMA_37453-MA_0002305
comment: This class was created automatically from a combination of ontologies
synonym: "Foot lumbrical" EXACT []
synonym: "foot lumbrical" EXACT []
synonym: "foot lumbrical muscle" EXACT []
synonym: "Lumbrical of foot" EXACT []
xref: FMA:37453 ! Lumbrical of foot
xref: MA:0002305 ! foot lumbrical muscle
is_a: UBERON:0001498 ! muscle of foot

[Term]
id: UBERON:0001505
name: coracobrachialis
alt_id: UBERON:FMA_37664-MA_0002282
def: "." [Wikipedia:Coracobrachialis]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "coracobrachial" EXACT []
synonym: "Coracobrachialis" EXACT []
synonym: "Pirogoff's aponeurosis" EXACT []
synonym: "pirogoff's aponeurosis" EXACT []
xref: FMA:37664 ! Coracobrachialis
xref: MA:0002282 ! coracobrachial
is_a: UBERON:0001499 ! muscle of arm
relationship: part_of UBERON:0000477 ! anatomical cluster
xref: ncithesaurus:Coracobrachialis ! Coracobrachialis

[Term]
id: UBERON:0001506
name: brachialis
alt_id: UBERON:FMA_37667-MA_0002271
def: "." [Wikipedia:Brachialis]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Brachialis" EXACT []
synonym: "Casserio's muscle" EXACT []
synonym: "casserio's muscle" EXACT []
xref: EHDAA:8281 ! brachialis
xref: FMA:37667 ! Brachialis
xref: HOG:0001026 ! brachialis
xref: MA:0002271 ! brachialis
is_a: UBERON:0001499 ! muscle of arm
xref: ncithesaurus:Brachialis ! Brachialis

[Term]
id: UBERON:0001507
name: biceps brachii
alt_id: UBERON:FMA_37670-MA_0002269
def: "." [Wikipedia:Biceps_brachii]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Biceps brachii" EXACT []
xref: FMA:37670 ! Biceps brachii
xref: MA:0002269 ! biceps brachii
is_a: UBERON:0001499 ! muscle of arm
relationship: part_of UBERON:0000477 ! anatomical cluster
xref: BTO:0003419 ! biceps brachii

[Term]
id: UBERON:0001508
name: arch of aorta
alt_id: UBERON:FMA_3768-MA_0000475-MIAA_0000059
def: "." [Wikipedia:Arch_of_aorta]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Aortic arch" EXACT []
synonym: "aortic arch" RELATED []
synonym: "Arch of aorta" EXACT []
xref: EHDAA:571 ! branchial arch
xref: EHDAA:7327 ! aortic arch
xref: FMA:3768 ! Arch of aorta
xref: HOG:0000122 ! aortic arch
xref: MA:0000475 ! arch of aorta
xref: MAT:0000059 ! branchial arch
xref: MIAA:0000059 ! branchial arch
is_a: UBERON:0000481 ! multi-tissue structure
relationship: part_of UBERON:0001515 ! thoracic aorta
xref: ZFA:0005004 ! aortic arch
xref: ncithesaurus:Aortic_Arch ! Aortic Arch

[Term]
id: UBERON:0001509
name: triceps brachii
alt_id: UBERON:FMA_37688-MA_0002399
def: "." [Wikipedia:Triceps_brachii]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Triceps brachii" EXACT []
xref: FMA:37688 ! Triceps brachii
xref: MA:0002399 ! triceps brachii
is_a: UBERON:0001499 ! muscle of arm

[Term]
id: UBERON:0001510
name: skin of knee
alt_id: UBERON:FMA_37800-MA_0000668
comment: This class was created automatically from a combination of ontologies
synonym: "Knee skin" EXACT []
synonym: "knee skin" EXACT []
synonym: "Skin of knee" EXACT []
xref: FMA:37800 ! Skin of knee
xref: MA:0000668 ! knee skin
is_a: UBERON:0001419 ! skin of limb
intersection_of: UBERON:0000014 ! zone of skin
intersection_of: part_of UBERON:0001465 ! knee
relationship: part_of UBERON:0001465 ! knee
xref: ncithesaurus:Knee_Skin ! Knee Skin

[Term]
id: UBERON:0001511
name: skin of leg
alt_id: UBERON:FMA_37828-MA_0000674
comment: This class was created automatically from a combination of ontologies
synonym: "Leg skin" EXACT []
synonym: "leg skin" EXACT []
synonym: "Skin of leg" EXACT []
xref: FMA:37828 ! Skin of leg
xref: MA:0000674 ! leg skin
is_a: UBERON:0001419 ! skin of limb
intersection_of: UBERON:0000014 ! zone of skin
intersection_of: part_of UBERON:0000978 ! leg
relationship: part_of UBERON:0000978 ! leg
xref: ncithesaurus:Leg_Skin ! Leg Skin

[Term]
id: UBERON:0001512
name: skin of ankle
alt_id: UBERON:FMA_37831-MA_0000641
comment: This class was created automatically from a combination of ontologies
synonym: "Ankle skin" EXACT []
synonym: "ankle skin" EXACT []
synonym: "Skin of ankle" EXACT []
xref: FMA:37831 ! Skin of ankle
xref: MA:0000641 ! ankle skin
is_a: UBERON:0001419 ! skin of limb
intersection_of: UBERON:0000014 ! zone of skin
intersection_of: part_of UBERON:0002388 ! ankle
relationship: part_of UBERON:0002388 ! ankle
xref: ncithesaurus:Ankle_Skin ! Ankle Skin

[Term]
id: UBERON:0001513
name: skin of foot
alt_id: UBERON:FMA_37834-MA_0000654
comment: This class was created automatically from a combination of ontologies
synonym: "Foot skin" EXACT []
synonym: "foot skin" EXACT []
synonym: "Skin of foot" EXACT []
xref: FMA:37834 ! Skin of foot
xref: MA:0000654 ! foot skin
is_a: UBERON:0001419 ! skin of limb
intersection_of: UBERON:0000014 ! zone of skin
intersection_of: part_of UBERON:0002387 ! foot
relationship: part_of UBERON:0002387 ! foot
xref: ncithesaurus:Foot_Skin ! Foot Skin

[Term]
id: UBERON:0001514
name: descending aorta
alt_id: UBERON:FMA_3784-MA_0002571
def: "." [Wikipedia:Descending_aorta]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Descending aorta" EXACT []
synonym: "Pars descendens aortae" EXACT []
synonym: "pars descendens aortae" EXACT []
xref: FMA:3784 ! Descending aorta
xref: MA:0002571 ! descending aorta
xref: OpenCyc:Mx4rv4EE35wpEbGdrcN5Y29ycA
is_a: UBERON:0000063 ! organ segment
relationship: part_of UBERON:0001009 ! circulatory system
xref: ncithesaurus:Descending_Aorta ! Descending Aorta

[Term]
id: UBERON:0001515
name: thoracic aorta
alt_id: UBERON:FMA_3786-MA_0002569
def: "." [Wikipedia:Thoracic_aorta]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Thoracic aorta" EXACT []
synonym: "Thoracic part of aorta" EXACT []
synonym: "thoracic part of aorta" EXACT []
xref: FMA:3786 ! Thoracic aorta
xref: GAID:471 ! thoracic aorta
xref: MA:0002569 ! thoracic aorta
xref: OpenCyc:Mx4rveb9TpwpEbGdrcN5Y29ycA
is_a: UBERON:0000947 ! aorta
intersection_of: UBERON:0000947 ! aorta
intersection_of: part_of UBERON:0000915 ! thorax
xref: ncithesaurus:Thoracic_Aorta ! Thoracic Aorta

[Term]
id: UBERON:0001516
name: abdominal aorta
alt_id: UBERON:FMA_3789-MA_0000474
def: "." [Wikipedia:Abdominal_aorta]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Abdominal aorta" EXACT []
synonym: "Abdominal part of aorta" EXACT []
synonym: "abdominal part of aorta" EXACT []
synonym: "Descending abdominal aorta" EXACT []
synonym: "descending abdominal aorta" EXACT []
synonym: "Pars abdominalis aortae" EXACT []
synonym: "pars abdominalis aortae" EXACT []
xref: FMA:3789 ! Abdominal aorta
xref: GAID:470 ! abdominal aorta
xref: galen:AbdominalAorta
xref: MA:0000474 ! abdominal aorta
xref: OpenCyc:Mx4rvYhWCZwpEbGdrcN5Y29ycA
is_a: UBERON:0000947 ! aorta
intersection_of: UBERON:0000947 ! aorta
intersection_of: part_of UBERON:0000916 ! abdomen
relationship: part_of UBERON:0001514 ! descending aorta
xref: ncithesaurus:Abdominal_Aorta ! Abdominal Aorta
xref: BTO:0002976 ! abdominal aorta

[Term]
id: UBERON:0001517
name: skin of elbow
alt_id: UBERON:FMA_38250-MA_0000610
comment: This class was created automatically from a combination of ontologies
synonym: "Elbow skin" EXACT []
synonym: "elbow skin" EXACT []
synonym: "Skin of elbow" EXACT []
xref: FMA:38250 ! Skin of elbow
xref: MA:0000610 ! elbow skin
is_a: UBERON:0002427 ! arm skin
intersection_of: UBERON:0000014 ! zone of skin
intersection_of: part_of UBERON:0001461 ! elbow
relationship: part_of UBERON:0001460 ! arm
relationship: part_of UBERON:0001461 ! elbow
xref: ncithesaurus:Elbow_Skin ! Elbow Skin

[Term]
id: UBERON:0001518
name: skin of wrist
alt_id: UBERON:FMA_38280-MA_0000638
comment: This class was created automatically from a combination of ontologies
synonym: "Skin of wrist" EXACT []
synonym: "Wrist skin" EXACT []
synonym: "wrist skin" EXACT []
xref: FMA:38280 ! Skin of wrist
xref: MA:0000638 ! wrist skin
is_a: UBERON:0001419 ! skin of limb
intersection_of: UBERON:0000014 ! zone of skin
intersection_of: part_of UBERON:0001462 ! wrist
relationship: part_of UBERON:0001462 ! wrist
xref: ncithesaurus:Wrist_Skin ! Wrist Skin

[Term]
id: UBERON:0001519
name: skin of hand
alt_id: UBERON:FMA_38295-MA_0000630
comment: This class was created automatically from a combination of ontologies
synonym: "Hand skin" EXACT []
synonym: "hand skin" EXACT []
synonym: "Skin of hand" EXACT []
xref: FMA:38295 ! Skin of hand
xref: MA:0000630 ! hand skin
is_a: UBERON:0001419 ! skin of limb
intersection_of: UBERON:0000014 ! zone of skin
intersection_of: part_of UBERON:0002398 ! hand
relationship: part_of UBERON:0002398 ! hand
xref: ncithesaurus:Hand_Skin ! Hand Skin

[Term]
id: UBERON:0001520
name: pronator teres
alt_id: UBERON:FMA_38450-MA_0002357
def: "." [Wikipedia:Pronator_teres]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Pronator teres" EXACT []
xref: FMA:38450 ! Pronator teres
xref: MA:0002357 ! pronator teres
is_a: UBERON:0001630 ! muscle organ
relationship: part_of UBERON:0000475 ! organism subdivision
xref: ncithesaurus:Pronator_Teres ! Pronator Teres

[Term]
id: UBERON:0001521
name: flexor carpi radialis
alt_id: UBERON:FMA_38459-MA_0002297
def: "." [Wikipedia:Flexor_carpi_radialis]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Flexor carpi radialis" EXACT []
xref: FMA:38459 ! Flexor carpi radialis
xref: MA:0002297 ! flexor carpi radialis
is_a: UBERON:0001630 ! muscle organ
relationship: part_of UBERON:0000475 ! organism subdivision
xref: ncithesaurus:Flexor_Carpi_Radialis ! Flexor Carpi Radialis

[Term]
id: UBERON:0001522
name: flexor carpi ulnaris
alt_id: UBERON:FMA_38465-MA_0002298
def: "." [Wikipedia:Flexor_carpi_ulnaris]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Flexor carpi ulnaris" EXACT []
xref: FMA:38465 ! Flexor carpi ulnaris
xref: MA:0002298 ! flexor carpi ulnaris
is_a: UBERON:0001630 ! muscle organ
relationship: part_of UBERON:0000475 ! organism subdivision
xref: ncithesaurus:Flexor_Carpi_Ulnaris ! Flexor Carpi Ulnaris

[Term]
id: UBERON:0001523
name: flexor digitorum profundus
alt_id: UBERON:FMA_38478-MA_0002300
def: "." [Wikipedia:Flexor_digitorum_profundus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Flexor digitorum profundus" EXACT []
xref: BTO:0001246
xref: FMA:38478 ! Flexor digitorum profundus
xref: MA:0002300 ! flexor digitorum profundus
is_a: UBERON:0001630 ! muscle organ
xref: ncithesaurus:Flexor_Digitorum_Profundus ! Flexor Digitorum Profundus

[Term]
id: UBERON:0001524
name: extensor carpi radialis longus
alt_id: UBERON:FMA_38494-MA_0002291
def: "." [Wikipedia:Extensor_carpi_radialis_longus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Extensor carpi radialis longus" EXACT []
xref: FMA:38494 ! Extensor carpi radialis longus
xref: MA:0002291 ! extensor carpi radialis longus
is_a: UBERON:0001630 ! muscle organ
relationship: part_of UBERON:0000475 ! organism subdivision
xref: ncithesaurus:Extensor_Carpi_Radialis_Longus ! Extensor Carpi Radialis Longus

[Term]
id: UBERON:0001525
name: extensor carpi radialis brevis
alt_id: UBERON:FMA_38497-MA_0002290
def: "." [Wikipedia:Extensor_carpi_radialis_brevis]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Extensor carpi radialis brevis" EXACT []
xref: FMA:38497 ! Extensor carpi radialis brevis
xref: MA:0002290 ! extensor carpi radialis brevis
is_a: UBERON:0001630 ! muscle organ
relationship: part_of UBERON:0000475 ! organism subdivision
xref: ncithesaurus:Extensor_Carpi_Radialis_Brevis ! Extensor Carpi Radialis Brevis

[Term]
id: UBERON:0001526
name: extensor carpi ulnaris
alt_id: UBERON:FMA_38506-MA_0002292
def: "." [Wikipedia:Extensor_carpi_ulnaris]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Extensor carpi ulnaris" EXACT []
xref: FMA:38506 ! Extensor carpi ulnaris
xref: MA:0002292 ! extensor carpi ulnaris
is_a: UBERON:0001630 ! muscle organ
relationship: part_of UBERON:0000475 ! organism subdivision
xref: ncithesaurus:Extensor_Carpi_Ulnaris ! Extensor Carpi Ulnaris

[Term]
id: UBERON:0001527
name: abductor pollicis longus
alt_id: UBERON:FMA_38515-MA_0002266
def: "." [Wikipedia:Abductor_pollicis_longus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Abductor pollicis longus" EXACT []
xref: FMA:38515 ! Abductor pollicis longus
xref: MA:0002266 ! abductor pollicis longus
is_a: UBERON:0001630 ! muscle organ
xref: ncithesaurus:Abductor_Pollicis_Longus ! Abductor Pollicis Longus

[Term]
id: UBERON:0001528
name: radio-ulnar joint
alt_id: UBERON:FMA_38863-MA_0000462
def: "." [Wikipedia:Radio-ulnar_joint]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Radio-ulnar joint" EXACT []
synonym: "Radioulnar joint" EXACT []
synonym: "radioulnar joint" EXACT []
xref: FMA:38863 ! Radio-ulnar joint
xref: MA:0000462 ! radio-ulnar joint
is_a: UBERON:0001491 ! wrist joint

[Term]
id: UBERON:0001529
name: brachiocephalic artery
alt_id: UBERON:FMA_3932-MA_0001922
def: "." [Wikipedia:Brachiocephalic_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Brachiocephalic artery" EXACT []
synonym: "Brachiocephalic trunk" EXACT []
synonym: "brachiocephalic trunk" EXACT []
synonym: "Innominate artery" EXACT []
synonym: "innominate artery" RELATED []
xref: FMA:3932 ! Brachiocephalic artery
xref: GAID:476 ! brachiocephalic trunk
xref: MA:0001922 ! brachiocephalic trunk
xref: OpenCyc:Mx4rv9mMTpwpEbGdrcN5Y29ycA
is_a: UBERON:0001637 ! artery
xref: ncithesaurus:Innominate_Artery ! Innominate Artery

[Term]
id: UBERON:0001530
name: common carotid artery
alt_id: UBERON:FMA_3939-ZFA_0000097
def: "Artery originating at the junction of the first two aortic arches and supplying the anterior brain. <a href='http://zfin.org/cgi-bin/ZFIN_jump?record=ZDB-PUB-961014-576'>Kimmel et al, 1995.</a>" [Wikipedia:Common_carotid_artery, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Carotid artery" EXACT []
synonym: "carotid artery" EXACT []
synonym: "Common carotid artery" EXACT []
synonym: "Trunk of common carotid tree" EXACT []
synonym: "trunk of common carotid tree" EXACT []
xref: BTO:0000168
xref: EFO:0000818 ! carotid artery
xref: EHDAA:6385 ! carotid artery
xref: EHDAA:7331 ! common carotid artery
xref: FMA:3939 ! Common carotid artery
xref: GAID:478 ! carotid artery
xref: GAID:479 ! common carotid artery
xref: galen:CarotidArtery
xref: HOG:0000266 ! carotid artery
xref: HOG:0000272 ! common carotid artery
xref: MA:0001926 ! common carotid artery
xref: MAT:0000501 ! carotid artery
xref: OpenCyc:Mx4rvg7rcJwpEbGdrcN5Y29ycA
xref: TAO:0000097 ! carotid artery
xref: ZFA:0000097 ! carotid artery
is_a: UBERON:0001637 ! artery
xref: ncithesaurus:Carotid_Artery ! Carotid Artery

[Term]
id: UBERON:0001531
name: right common carotid artery
alt_id: UBERON:FMA_3941-MA_0001928
def: "." [Wikipedia:Right_common_carotid_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Right common carotid artery" EXACT []
synonym: "Trunk of right common carotid tree" EXACT []
synonym: "trunk of right common carotid tree" EXACT []
xref: FMA:3941 ! Right common carotid artery
xref: MA:0001928 ! right common carotid artery
xref: OpenCyc:Mx4rtW9-AqgEEdudWQACs5b6Bw
is_a: UBERON:0001530 ! common carotid artery
xref: ncithesaurus:Right_Common_Carotid_Artery ! Right Common Carotid Artery

[Term]
id: UBERON:0001532
name: internal carotid artery
alt_id: UBERON:FMA_3947-MA_0001930-XAO_0000366-ZFA_0005081
def: "." [Wikipedia:Internal_carotid_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "ICA" RELATED []
synonym: "Internal carotid artery" EXACT []
xref: EHDAA:408 ! internal carotid artery
xref: EHDAA:6389 ! internal carotid artery
xref: FMA:3947 ! Internal carotid artery
xref: GAID:481 ! internal carotid artery
xref: HOG:0000267 ! internal carotid artery
xref: MA:0001930 ! internal carotid artery
xref: OpenCyc:Mx4rvYx8KZwpEbGdrcN5Y29ycA
xref: TAO:0005081 ! internal carotid artery
xref: XAO:0000366 ! internal carotid artery
xref: ZFA:0005081 ! internal carotid artery
is_a: UBERON:0001637 ! artery
relationship: part_of UBERON:0001530 ! common carotid artery
xref: ncithesaurus:Internal_Carotid_Artery ! Internal Carotid Artery

[Term]
id: UBERON:0001533
name: subclavian artery
alt_id: UBERON:FMA_3951-MA_0002045-ZFA_0005086
def: "The pectoral (subclavian) arteries originate from the dorsal aorta and takes the blood outward into the fin from the paired portion of the dorsal aorta posterior to the last aortic arch. <a href='http://zfin.org/zf_info/zfbook/stages/hatch.html'> Kimmel et al. 1993</a>" [Wikipedia:Subclavian_artery, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Arterial tree of upper limb" EXACT []
synonym: "arterial tree of upper limb" EXACT []
synonym: "PA" RELATED []
synonym: "pectoral artery" EXACT []
synonym: "Subclavian arterial tree" EXACT []
synonym: "subclavian arterial tree" EXACT []
synonym: "Subclavian artery" EXACT []
xref: EHDAA:4357 ! subclavian artery
xref: FMA:3951 ! Subclavian artery
xref: GAID:511 ! subclavian artery
xref: MA:0002045 ! subclavian artery
xref: TAO:0005086 ! pectoral artery
xref: ZFA:0005086 ! pectoral artery
is_a: UBERON:0001637 ! artery
xref: ncithesaurus:Subclavian_Artery ! Subclavian Artery

[Term]
id: UBERON:0001534
name: right subclavian artery
alt_id: UBERON:FMA_3953-MA_0002047
def: "." [Wikipedia:Right_subclavian_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Right subclavian artery" EXACT []
xref: FMA:3953 ! Right subclavian artery
xref: MA:0002047 ! right subclavian artery
xref: OpenCyc:Mx4rtW7hwqgEEdudWQACs5b6Bw
is_a: UBERON:0001533 ! subclavian artery
xref: ncithesaurus:Right_Subclavian_Artery ! Right Subclavian Artery

[Term]
id: UBERON:0001535
name: vertebral artery
alt_id: UBERON:FMA_3956-MA_0002077-ZFA_0005033
def: "." [Wikipedia:Vertebral_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Vertebral artery" EXACT []
xref: EHDAA:5328 ! vertebral artery
xref: FMA:3956 ! Vertebral artery
xref: GAID:518 ! vertebral artery
xref: HOG:0000263 ! vertebral artery
xref: MA:0002077 ! vertebral artery
xref: OpenCyc:Mx4rvg_ir5wpEbGdrcN5Y29ycA
xref: TAO:0005033 ! vertebral artery
xref: ZFA:0005033 ! vertebral artery
is_a: UBERON:0001637 ! artery
relationship: part_of UBERON:0001533 ! subclavian artery
xref: ncithesaurus:Vertebral_Artery ! Vertebral Artery

[Term]
id: UBERON:0001536
name: left common carotid artery
alt_id: UBERON:FMA_4058-MA_0001927
def: "." [Wikipedia:Left_common_carotid_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Left common carotid artery" EXACT []
synonym: "Trunk of left common carotid tree" EXACT []
synonym: "trunk of left common carotid tree" EXACT []
xref: FMA:4058 ! Left common carotid artery
xref: MA:0001927 ! left common carotid artery
xref: OpenCyc:Mx4rdz4xcLVIEduAAAAOpmP6tw
is_a: UBERON:0001530 ! common carotid artery
xref: ncithesaurus:Left_Common_Carotid_Artery ! Left Common Carotid Artery

[Term]
id: UBERON:0001537
name: anterior tibial artery
alt_id: UBERON:FMA_43894-MA_0002574
def: "." [Wikipedia:Anterior_tibial_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Anterior tibial artery" EXACT []
xref: FMA:43894 ! Anterior tibial artery
xref: MA:0002574 ! anterior tibial artery
xref: OpenCyc:Mx4rvaHcEZwpEbGdrcN5Y29ycA
is_a: UBERON:0001637 ! artery
xref: ncithesaurus:Anterior_Tibial_Artery ! Anterior Tibial Artery

[Term]
id: UBERON:0001538
name: posterior tibial artery
alt_id: UBERON:FMA_43895-MA_0002575
def: "." [Wikipedia:Posterior_tibial_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Posterior tibial artery" EXACT []
xref: FMA:43895 ! Posterior tibial artery
xref: MA:0002575 ! posterior tibial artery
is_a: UBERON:0001637 ! artery
xref: ncithesaurus:Posterior_Tibial_Artery ! Posterior Tibial Artery

[Term]
id: UBERON:0001539
name: dorsalis pedis artery
alt_id: UBERON:FMA_43915-MA_0001942
def: "." [Wikipedia:Dorsalis_pedis_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Dorsal artery of foot" EXACT []
synonym: "dorsal artery of foot" EXACT []
synonym: "Dorsalis pedis artery" EXACT []
xref: FMA:43915 ! Dorsalis pedis artery
xref: galen:DorsalisPedisArtery
xref: MA:0001942 ! dorsal artery of foot
is_a: UBERON:0001637 ! artery
xref: ncithesaurus:Dorsalis_Pedis_Artery ! Dorsalis Pedis Artery

[Term]
id: UBERON:0001540
name: peroneal artery
alt_id: UBERON:FMA_43921-MA_0002018
def: "." [Wikipedia:Peroneal_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Fibular artery" EXACT []
synonym: "fibular artery" EXACT []
synonym: "Peroneal artery" EXACT []
xref: FMA:43921 ! Peroneal artery
xref: MA:0002018 ! peroneal artery
is_a: UBERON:0001637 ! artery
relationship: part_of UBERON:0001538 ! posterior tibial artery
xref: ncithesaurus:Peroneal_Artery ! Peroneal Artery

[Term]
id: UBERON:0001541
name: medial plantar artery
alt_id: UBERON:FMA_43925-MA_0001997
def: "." [Wikipedia:Medial_plantar_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Medial plantar artery" EXACT []
xref: FMA:43925 ! Medial plantar artery
xref: MA:0001997 ! medial plantar artery
is_a: UBERON:0001637 ! artery
relationship: part_of UBERON:0001538 ! posterior tibial artery
xref: ncithesaurus:Medial_Plantar_Artery ! Medial Plantar Artery

[Term]
id: UBERON:0001542
name: inguinal lymph node
alt_id: UBERON:FMA_44226-MA_0000737
def: "." [Wikipedia:Inguinal_lymph_node]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Inguinal lymph node" EXACT []
xref: FMA:44226 ! Inguinal lymph node
xref: MA:0000737 ! inguinal lymph node
is_a: UBERON:0000029 ! lymph node
xref: ncithesaurus:Inguinal_Lymph_Node ! Inguinal Lymph Node

[Term]
id: UBERON:0001543
name: popliteal lymph node
alt_id: UBERON:FMA_44227-MA_0000738
def: "." [Wikipedia:Popliteal_lymph_node]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Popliteal lymph node" EXACT []
xref: FMA:44227 ! Popliteal lymph node
xref: MA:0000738 ! popliteal lymph node
is_a: UBERON:0000029 ! lymph node
xref: ncithesaurus:Popliteal_Lymph_Node ! Popliteal Lymph Node

[Term]
id: UBERON:0001544
name: popliteal vein
alt_id: UBERON:FMA_44327-MA_0002197
def: "." [Wikipedia:Popliteal_vein]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Popliteal vein" EXACT []
xref: FMA:44327 ! Popliteal vein
xref: GAID:537 ! popliteal vein
xref: MA:0002197 ! popliteal vein
xref: OpenCyc:Mx4rv8Ch-JwpEbGdrcN5Y29ycA
is_a: UBERON:0001638 ! vein
relationship: part_of UBERON:0001465 ! knee
xref: ncithesaurus:Popliteal_Vein ! Popliteal Vein

[Term]
id: UBERON:0001545
name: anterior tibial vein
alt_id: UBERON:FMA_44331-MA_0002244
def: "." [Wikipedia:Anterior_tibial_vein]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Anterior tibial vein" EXACT []
xref: FMA:44331 ! Anterior tibial vein
xref: galen:AnteriorTibialVein
xref: MA:0002244 ! anterior tibial vein
xref: OpenCyc:Mx4rvXYDl5wpEbGdrcN5Y29ycA
is_a: UBERON:0001638 ! vein
relationship: part_of UBERON:0000978 ! leg
xref: ncithesaurus:Anterior_Tibial_Vein ! Anterior Tibial Vein

[Term]
id: UBERON:0001546
name: posterior tibial vein
alt_id: UBERON:FMA_44332-MA_0002245
def: "." [Wikipedia:Posterior_tibial_vein]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Posterior tibial vein" EXACT []
xref: FMA:44332 ! Posterior tibial vein
xref: MA:0002245 ! posterior tibial vein
is_a: UBERON:0001638 ! vein
xref: ncithesaurus:Posterior_Tibial_Vein ! Posterior Tibial Vein

[Term]
id: UBERON:0001547
name: small saphenous vein
alt_id: UBERON:FMA_44333-MA_0002217
def: "." [Wikipedia:Small_saphenous_vein]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Lesser saphenous vein" EXACT []
synonym: "lesser saphenous vein" EXACT []
synonym: "Short saphenous vein" EXACT []
synonym: "short saphenous vein" EXACT []
synonym: "Small saphenous vein" EXACT []
xref: FMA:44333 ! Small saphenous vein
xref: galen:LesserSaphenousVein
xref: MA:0002217 ! small saphenous vein
is_a: UBERON:0001638 ! vein
xref: ncithesaurus:Short_Saphenous_Vein ! Short Saphenous Vein
xref: BTO:0003272 ! small saphenous vein

[Term]
id: UBERON:0001548
name: lateral marginal vein
alt_id: UBERON:FMA_44359-MA_0002160
comment: This class was created automatically from a combination of ontologies
synonym: "Lateral marginal vein" EXACT []
synonym: "Lateral marginal vein of foot" EXACT []
synonym: "lateral marginal vein of foot" EXACT []
synonym: "Vena marginalis lateralis" EXACT []
synonym: "vena marginalis lateralis" EXACT []
xref: FMA:44359 ! Lateral marginal vein
xref: MA:0002160 ! lateral marginal vein
is_a: UBERON:0001638 ! vein

[Term]
id: UBERON:0001549
name: dorsal metatarsal vein
alt_id: UBERON:FMA_44377-MA_0002105
comment: This class was created automatically from a combination of ontologies
synonym: "Dorsal metatarsal vein" EXACT []
synonym: "Metatarsal vein" EXACT []
synonym: "metatarsal vein" EXACT []
xref: FMA:44377 ! Dorsal metatarsal vein
xref: MA:0002105 ! dorsal metatarsal vein
is_a: UBERON:0001638 ! vein
xref: ncithesaurus:Dorsal_Metatarsal_Vein ! Dorsal Metatarsal Vein

[Term]
id: UBERON:0001550
name: medial marginal vein
alt_id: UBERON:FMA_44420-MA_0002171
comment: This class was created automatically from a combination of ontologies
synonym: "Medial marginal vein" EXACT []
synonym: "Medial marginal vein of foot" EXACT []
synonym: "medial marginal vein of foot" EXACT []
synonym: "Vena marginalis medialis" EXACT []
synonym: "vena marginalis medialis" EXACT []
xref: FMA:44420 ! Medial marginal vein
xref: MA:0002171 ! medial marginal vein
is_a: UBERON:0001638 ! vein

[Term]
id: UBERON:0001551
name: sural vein
alt_id: UBERON:FMA_44561-MA_0002231
comment: This class was created automatically from a combination of ontologies
synonym: "Sural vein" EXACT []
xref: FMA:44561 ! Sural vein
xref: MA:0002231 ! sural vein
is_a: UBERON:0001638 ! vein

[Term]
id: UBERON:0001552
name: arcuate artery
alt_id: UBERON:FMA_44594-MA_0002583
def: "." [Wikipedia:Arcuate_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Arcuate artery" EXACT []
xref: FMA:44594 ! Arcuate artery
xref: MA:0002583 ! arcuate artery
relationship: part_of UBERON:0001225 ! cortex of kidney

[Term]
id: UBERON:0001553
name: medial tarsal artery
alt_id: UBERON:FMA_44598-MA_0001998
comment: This class was created automatically from a combination of ontologies
synonym: "Medial tarsal artery" EXACT []
xref: FMA:44598 ! Medial tarsal artery
xref: MA:0001998 ! medial tarsal artery
is_a: UBERON:0001637 ! artery
xref: ncithesaurus:Medial_Tarsal_Artery ! Medial Tarsal Artery

[Term]
id: UBERON:0001554
name: skin of hip
alt_id: UBERON:FMA_45282-MA_0000658
comment: This class was created automatically from a combination of ontologies
synonym: "Hip skin" EXACT []
synonym: "hip skin" EXACT []
synonym: "Skin of hip" EXACT []
xref: FMA:45282 ! Skin of hip
xref: MA:0000658 ! hip skin
is_a: UBERON:0001419 ! skin of limb
intersection_of: UBERON:0000014 ! zone of skin
intersection_of: part_of UBERON:0001464 ! hip
relationship: part_of UBERON:0001464 ! hip

[Term]
id: UBERON:0001555
name: gut
alt_id: UBERON:FMA_45615-MA_0000917-ZFA_0000112
def: "The alimentary or digestive tract, and associated organs. Extends from the beginning of the intestines to the anus" [Wikipedia:Gastrointestinal_tract, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "alimentary canal" RELATED []
synonym: "digestive tract" EXACT []
synonym: "excretory canal" RELATED []
synonym: "excretory tract " RELATED []
synonym: "Gut" EXACT []
synonym: "gut tube" RELATED []
synonym: "lower gastrointestinal tract" EXACT []
xref: BILA:0000083
xref: BTO:0000545
xref: EHDAA:518 ! gut
xref: FBbt:00003125 ! alimentary canal
xref: FMA:45615 ! Gut
xref: HOG:0000309 ! gut
xref: MA:0000917 ! gut
xref: OpenCyc:Mx4rvVi0GpwpEbGdrcN5Y29ycA
xref: TAO:0000112 ! gut
xref: ZFA:0000112 ! gut
is_a: UBERON:0000481 ! multi-tissue structure
relationship: develops_from UBERON:0000925 ! endoderm
relationship: part_of UBERON:0000916 ! abdomen
relationship: part_of UBERON:0001007 ! digestive system
xref: ncithesaurus:Lower_Gastrointestinal_Tract ! Lower Gastrointestinal Tract

[Term]
id: UBERON:0001556
name: lower urinary tract
alt_id: UBERON:FMA_45659-MA_0002636
def: "*Subdivision of urinary system which consists of the urinary bladder and the urethra." []
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Lower urinary tract" EXACT []
xref: FMA:45659 ! Lower urinary tract
xref: MA:0002636 ! lower urinary tract
is_a: UBERON:0000061 ! anatomical structure
relationship: part_of UBERON:0001008 ! urinary system

[Term]
id: UBERON:0001557
name: upper respiratory tract
alt_id: UBERON:FMA_45661-MA_0000442
def: "Subdivision of respiratory system which consists of the nose, nasopharynx, oropharynx and larynx" [Wikipedia:Upper_respiratory_tract]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Upper respiratory tract" EXACT []
xref: FMA:45661 ! Upper respiratory tract
xref: HOG:0000406 ! upper respiratory tract
xref: MA:0000442 ! upper respiratory tract
xref: OpenCyc:Mx4rtT2HwgJMEdyAAADggVbxzQ
is_a: UBERON:0000072 ! segment of respiratory tract

[Term]
id: UBERON:0001558
name: lower respiratory tract
alt_id: UBERON:FMA_45662-MA_0000435
def: "Subdivision of respiratory system which consists of the tracheobronchial tree, right lung and left lung." [Wikipedia:Lower_respiratory_tract]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Lower respiratory tract" EXACT []
xref: FMA:45662 ! Lower respiratory tract
xref: HOG:0000382 ! lower respiratory tract
xref: MA:0000435 ! lower respiratory tract
xref: OpenCyc:Mx4rQRqjUgAKEdyHxgDggVfs8g
is_a: UBERON:0000072 ! segment of respiratory tract

[Term]
id: UBERON:0001559
name: head of organ
alt_id: UBERON:FMA_45729-MA_0000581
comment: This class was created automatically from a combination of ontologies
synonym: "Head of organ" EXACT []
synonym: "Organ head" EXACT []
synonym: "organ head" EXACT []
xref: FMA:45729 ! Head of organ
is_a: UBERON:0000481 ! multi-tissue structure

[Term]
id: UBERON:0001560
name: neck of organ
alt_id: UBERON:FMA_45733-MA_0000589
comment: This class was created automatically from a combination of ontologies
synonym: "Neck of organ" EXACT []
synonym: "Organ neck" EXACT []
synonym: "organ neck" EXACT []
xref: FMA:45733 ! Neck of organ
is_a: UBERON:0000064 ! organ part

[Term]
id: UBERON:0001561
name: subcostal artery
alt_id: UBERON:FMA_4613-MA_0002048
def: "." [Wikipedia:Subcostal_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Subcostal artery" EXACT []
xref: FMA:4613 ! Subcostal artery
xref: MA:0002048 ! subcostal artery
is_a: UBERON:0001637 ! artery
xref: ncithesaurus:Subcostal_Artery ! Subcostal Artery

[Term]
id: UBERON:0001562
name: digastric
alt_id: UBERON:FMA_46291-MA_0002288
def: "." [Wikipedia:Digastric]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Digastric" EXACT []
xref: FMA:46291 ! Digastric
xref: MA:0002288 ! digastric
is_a: UBERON:0002377 ! muscle of neck

[Term]
id: UBERON:0001563
name: longus capitis
alt_id: UBERON:FMA_46308-MA_0002340
def: "." [Wikipedia:Longus_capitis]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Longus capitis" EXACT []
xref: FMA:46308 ! Longus capitis
xref: MA:0002340 ! longus capitis
is_a: UBERON:0001630 ! muscle organ
xref: ncithesaurus:Longus_Capitis ! Longus Capitis

[Term]
id: UBERON:0001564
name: mylohyoid
alt_id: UBERON:FMA_46320-MA_0002344
def: "." [Wikipedia:Mylohyoid]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Mylohyoid" EXACT []
xref: FMA:46320 ! Mylohyoid
xref: MA:0002344 ! mylohyoid
is_a: UBERON:0002377 ! muscle of neck
xref: ncithesaurus:Mylohyoid ! Mylohyoid

[Term]
id: UBERON:0001565
name: geniohyoid
alt_id: UBERON:FMA_46325-MA_0002308
def: "." [Wikipedia:Geniohyoid]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Geniohyoid" EXACT []
xref: FMA:46325 ! Geniohyoid
xref: MA:0002308 ! geniohyoid
is_a: UBERON:0002377 ! muscle of neck
xref: ncithesaurus:Geniohyoid ! Geniohyoid

[Term]
id: UBERON:0001566
name: cricothyroid muscle
alt_id: UBERON:FMA_46417-MA_0002284
def: "." [Wikipedia:Cricothyroid_muscle]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Cricothyroid" EXACT []
synonym: "cricothyroid" EXACT []
synonym: "Cricothyroid muscle" EXACT []
xref: FMA:46417 ! Cricothyroid muscle
xref: MA:0002284 ! cricothyroid
is_a: UBERON:0001568 ! muscle of larynx
xref: ncithesaurus:Cricothyroid_Muscle ! Cricothyroid Muscle

[Term]
id: UBERON:0001567
name: cheek
alt_id: UBERON:FMA_46476-MA_0002475
def: "." [Wikipedia:Cheek]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Cheek" EXACT []
xref: FMA:46476 ! Cheek
xref: GAID:65 ! cheek
xref: galen:Cheek
xref: MA:0002475 ! cheek
xref: OpenCyc:Mx4rvVi5WZwpEbGdrcN5Y29ycA
is_a: UBERON:0001444 ! subdivision of head
relationship: part_of UBERON:0001456 ! face
xref: ncithesaurus:Cheek ! Cheek
xref: BTO:0001754 ! cheek

[Term]
id: UBERON:0001568
name: muscle of larynx
alt_id: UBERON:FMA_46562-MA_0001768
comment: This class was created automatically from a combination of ontologies
synonym: "Laryngeal muscle" EXACT []
synonym: "laryngeal muscle" EXACT []
synonym: "larynx muscle" EXACT []
synonym: "Muscle of larynx" EXACT []
xref: FMA:46562 ! Muscle of larynx
xref: GAID:144 ! laryngeal muscle
xref: MA:0001768 ! larynx muscle
is_a: UBERON:0002377 ! muscle of neck
intersection_of: UBERON:0001630 ! muscle organ
intersection_of: part_of UBERON:0001737 ! larynx
relationship: part_of UBERON:0001737 ! larynx
xref: ncithesaurus:Laryngeal_Muscle ! Laryngeal Muscle
xref: BTO:0001626 ! laryngeal muscle

[Term]
id: UBERON:0001569
name: constrictor muscle of pharynx
alt_id: UBERON:FMA_46620-MA_0002278
def: "." [Wikipedia:Constrictor_muscle_of_pharynx]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Constrictor muscle of pharynx" EXACT []
synonym: "Pharyngeal constrictor muscle" EXACT []
synonym: "pharyngeal constrictor muscle" EXACT []
xref: FMA:46620 ! Constrictor muscle of pharynx
xref: MA:0002278 ! constrictor muscle of pharynx
is_a: UBERON:0000933 ! pharyngeal muscle

[Term]
id: UBERON:0001570
name: inferior pharyngeal constrictor
alt_id: UBERON:FMA_46623-MA_0002279
def: "." [Wikipedia:Inferior_pharyngeal_constrictor]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "constrictor muscle of pharynx inferior" EXACT []
synonym: "Inferior constrictor" EXACT []
synonym: "inferior constrictor" EXACT []
synonym: "Inferior constrictor of pharynx" EXACT []
synonym: "inferior constrictor of pharynx" EXACT []
synonym: "Inferior constrictor pharyngeus" EXACT []
synonym: "inferior constrictor pharyngeus" EXACT []
synonym: "Inferior pharyngeal constrictor" EXACT []
xref: FMA:46623 ! Inferior pharyngeal constrictor
xref: MA:0002279 ! constrictor muscle of pharynx inferior
is_a: UBERON:0001569 ! constrictor muscle of pharynx

[Term]
id: UBERON:0001571
name: genioglossus
alt_id: UBERON:FMA_46690-MA_0002307
def: "." [Wikipedia:Genioglossus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Genioglossus" EXACT []
xref: EHDAA:9150 ! genioglossus
xref: FMA:46690 ! Genioglossus
xref: HOG:0000847 ! genioglossus
xref: MA:0002307 ! genioglossus
is_a: UBERON:0001575 ! extrinsic muscle of tongue
relationship: part_of UBERON:0001723 ! tongue
xref: ncithesaurus:Genioglossus ! Genioglossus

[Term]
id: UBERON:0001572
name: hyoglossus
alt_id: UBERON:FMA_46691-MA_0002317
def: "." [Wikipedia:Hyoglossus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Hyoglossus" EXACT []
xref: FMA:46691 ! Hyoglossus
xref: MA:0002317 ! hyoglossus
is_a: UBERON:0001575 ! extrinsic muscle of tongue
relationship: part_of UBERON:0001723 ! tongue

[Term]
id: UBERON:0001573
name: styloglossus
alt_id: UBERON:FMA_46692-MA_0002387
def: "." [Wikipedia:Styloglossus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Styloglossus" EXACT []
xref: FMA:46692 ! Styloglossus
xref: MA:0002387 ! styloglossus
is_a: UBERON:0001575 ! extrinsic muscle of tongue
relationship: part_of UBERON:0001723 ! tongue
xref: ncithesaurus:Styloglossus ! Styloglossus

[Term]
id: UBERON:0001574
name: palatoglossus
alt_id: UBERON:FMA_46697-MA_0002351
def: "." [Wikipedia:Palatoglossus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Palatoglossus" EXACT []
xref: FMA:46697 ! Palatoglossus
xref: MA:0002351 ! palatoglossus
is_a: UBERON:0002376 ! muscle of head

[Term]
id: UBERON:0001575
name: extrinsic muscle of tongue
alt_id: UBERON:FMA_46699-MA_0002296
comment: This class was created automatically from a combination of ontologies
synonym: "Extrinsic muscle of tongue" EXACT []
synonym: "extrinsic tongue muscle" EXACT []
xref: FMA:46699 ! Extrinsic muscle of tongue
xref: HOG:0000825 ! extrinsic tongue muscle
xref: MA:0002296 ! extrinsic tongue muscle
is_a: UBERON:0002376 ! muscle of head

[Term]
id: UBERON:0001576
name: intrinsic muscle of tongue
alt_id: UBERON:FMA_46701-MA_0002327
comment: This class was created automatically from a combination of ontologies
synonym: "Intrinsic lingual muscle" EXACT []
synonym: "intrinsic lingual muscle" EXACT []
synonym: "Intrinsic muscle of tongue" EXACT []
synonym: "intrinsic tongue muscle" EXACT []
xref: FMA:46701 ! Intrinsic muscle of tongue
xref: HOG:0000748 ! intrinsic tongue muscle
xref: MA:0002327 ! intrinsic tongue muscle
is_a: UBERON:0002376 ! muscle of head

[Term]
id: UBERON:0001577
name: muscle of face
alt_id: UBERON:FMA_46751-XAO_0001013
def: "." [Wikipedia:Facial_muscle]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Face muscle" EXACT []
synonym: "face muscle" EXACT []
synonym: "Facial muscle" EXACT []
synonym: "facial muscle" EXACT []
synonym: "Muscle of face" EXACT []
xref: FMA:46751 ! Muscle of face
xref: GAID:143 ! facial muscle
xref: XAO:0001013 ! facial muscle
is_a: UBERON:0002376 ! muscle of head
intersection_of: UBERON:0001630 ! muscle organ
intersection_of: part_of UBERON:0001456 ! face
xref: ncithesaurus:Facial_Muscle ! Facial Muscle

[Term]
id: UBERON:0001578
name: orbicularis oculi
alt_id: UBERON:FMA_46779-MA_0001254
def: "." [Wikipedia:Orbicularis_oculi]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Orbicularis oculi" EXACT []
xref: FMA:46779 ! Orbicularis oculi
xref: MA:0001254 ! orbicularis oculi
is_a: UBERON:0001577 ! muscle of face
relationship: part_of UBERON:0001601 ! extra-ocular muscle
xref: ncithesaurus:Orbicularis_Oculi ! Orbicularis Oculi

[Term]
id: UBERON:0001579
name: olfactory nerve
alt_id: UBERON:FMA_46787-MA_0001096-XAO_0000426-ZFA_0000249
def: "Segment of neural tree organ which is continuous with the olfactory epithelium and an olfactory bulb. // Cranial nerve that supplies the nasal organ." [ISBN:0471209627, Wikipedia:Olfactory_nerve]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "CN-I" RELATED []
synonym: "cranial nerve I" RELATED []
synonym: "First cranial nerve" EXACT []
synonym: "first cranial nerve" EXACT []
synonym: "olfactory I nerve" EXACT []
synonym: "olfactory i nerve" EXACT []
synonym: "Olfactory nerve" EXACT []
synonym: "Olfactory nerve [I]" EXACT []
synonym: "olfactory nerve [i]" EXACT []
xref: FMA:46787 ! Olfactory nerve
xref: GAID:830 ! olfactory nerve
xref: HOG:0000703 ! olfactory nerve
xref: MA:0001096 ! olfactory I nerve
xref: NIF_GrossAnatomy:birnlex_1319 ! Olfactory nerve
xref: OpenCyc:Mx4rvZuXAJwpEbGdrcN5Y29ycA
xref: TAO:0000249 ! cranial nerve I
xref: XAO:0000426 ! cranial nerve I
xref: ZFA:0000249 ! cranial nerve I
is_a: UBERON:0001785 ! cranial nerve
relationship: develops_from UBERON:0003050 ! olfactory placode
xref: ncithesaurus:Olfactory_Nerve ! Olfactory Nerve
xref: BTO:0003648 ! olfactory nerve

[Term]
id: UBERON:0001580
name: levator labii superioris
alt_id: UBERON:FMA_46805-MA_0002333
def: "." [Wikipedia:Levator_labii_superioris]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Levator labii superioris" EXACT []
xref: FMA:46805 ! Levator labii superioris
xref: MA:0002333 ! levator labii superioris
is_a: UBERON:0001577 ! muscle of face
xref: ncithesaurus:Levator_Labii_Superioris ! Levator Labii Superioris

[Term]
id: UBERON:0001581
name: depressor labii inferioris
alt_id: UBERON:FMA_46816-MA_0002287
def: "." [Wikipedia:Depressor_labii_inferioris]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Depressor labii inferioris" EXACT []
xref: FMA:46816 ! Depressor labii inferioris
xref: MA:0002287 ! depressor labii inferioris
is_a: UBERON:0001577 ! muscle of face
xref: ncithesaurus:Depressor_Labii_Inferioris ! Depressor Labii Inferioris

[Term]
id: UBERON:0001582
name: buccinator
alt_id: UBERON:FMA_46834-MA_0002272
def: "." [Wikipedia:Buccinator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Buccinator" EXACT []
xref: FMA:46834 ! Buccinator
xref: MA:0002272 ! buccinator
is_a: UBERON:0001577 ! muscle of face
xref: ncithesaurus:Buccinator ! Buccinator

[Term]
id: UBERON:0001583
name: extrinsic auricular muscle
alt_id: UBERON:FMA_46854-MA_0001230
comment: This class was created automatically from a combination of ontologies
synonym: "Extrinsic auricular muscle" EXACT []
xref: FMA:46854 ! Extrinsic auricular muscle
xref: MA:0001230 ! extrinsic auricular muscle
is_a: UBERON:0001595 ! auricular muscle
relationship: part_of UBERON:0001595 ! auricular muscle

[Term]
id: UBERON:0001584
name: left subclavian artery
alt_id: UBERON:FMA_4694-MA_0002046
def: "." [Wikipedia:Left_subclavian_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Left subclavian artery" EXACT []
xref: FMA:4694 ! Left subclavian artery
xref: MA:0002046 ! left subclavian artery
xref: OpenCyc:Mx4rtW7hw6gEEdudWQACs5b6Bw
is_a: UBERON:0001533 ! subclavian artery
xref: ncithesaurus:Left_Subclavian_Artery ! Left Subclavian Artery

[Term]
id: UBERON:0001585
name: superior vena cava
alt_id: UBERON:FMA_4720-MA_0000481
def: "Trunk of systemic vein which is formed by the union of the right and left brachiocephalic veins and terminates in the right atrium." [Wikipedia:Superior_vena_cava]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Anterior vena cava" EXACT []
synonym: "anterior vena cava" EXACT []
synonym: "Superior vena cava" EXACT []
xref: EHDAA:8726 ! superior vena cava
xref: FMA:4720 ! Superior vena cava
xref: GAID:549 ! superior vena cava
xref: HOG:0001195 ! anterior vena cava
xref: MA:0000481 ! superior vena cava
is_a: UBERON:0000063 ! organ segment
relationship: part_of UBERON:0001009 ! circulatory system
relationship: part_of UBERON:0002224 ! thoracic cavity
xref: ncithesaurus:Superior_Vena_Cava ! Superior Vena Cava
xref: BTO:0002683 ! superior vena cava

[Term]
id: UBERON:0001586
name: internal jugular vein
alt_id: UBERON:FMA_4724-MA_0002157
def: "." [Wikipedia:Internal_jugular_vein]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Internal jugular vein" EXACT []
synonym: "Internal jugular venous tree" EXACT []
synonym: "internal jugular venous tree" EXACT []
xref: EHDAA:5407 ! internal jugular vein
xref: FMA:4724 ! Internal jugular vein
xref: galen:InternalJugularVein
xref: MA:0002157 ! internal jugular vein
is_a: UBERON:0001638 ! vein
xref: ncithesaurus:Internal_Jugular_Vein ! Internal Jugular Vein

[Term]
id: UBERON:0001587
name: subclavian vein
alt_id: UBERON:FMA_4725-MA_0002221
def: "." [Wikipedia:Subclavian_vein]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Subclavian vein" EXACT []
synonym: "Subclavian venous tree" EXACT []
synonym: "subclavian venous tree" EXACT []
xref: EHDAA:4455 ! subclavian vein
xref: FMA:4725 ! Subclavian vein
xref: GAID:546 ! subclavian vein
xref: MA:0002221 ! subclavian vein
is_a: UBERON:0001638 ! vein
xref: ncithesaurus:Subclavian_Vein ! Subclavian Vein

[Term]
id: UBERON:0001588
name: vertebral vein
alt_id: UBERON:FMA_4727-MA_0002262
def: "." [Wikipedia:Vertebral_vein]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Vertebral vein" EXACT []
xref: FMA:4727 ! Vertebral vein
xref: MA:0002262 ! vertebral vein
is_a: UBERON:0001638 ! vein
xref: ncithesaurus:Vertebral_Vein ! Vertebral Vein

[Term]
id: UBERON:0001589
name: internal thoracic vein
alt_id: UBERON:FMA_4729-MA_0002237
def: "." [Wikipedia:Internal_thoracic_vein]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Internal thoracic vein" EXACT []
xref: FMA:4729 ! Internal thoracic vein
xref: MA:0002237 ! internal thoracic vein
is_a: UBERON:0001638 ! vein
xref: ncithesaurus:Internal_Thoracic_Vein ! Internal Thoracic Vein

[Term]
id: UBERON:0001590
name: pericardiacophrenic vein
alt_id: UBERON:FMA_4742-MA_0002187
def: "Vena comitans of the pericardiacophrenic arteries." [Wikipedia:Pericardiacophrenic_veins]
comment: This class was created automatically from a combination of ontologies
synonym: "Pericardiacophrenic vein" EXACT []
xref: FMA:4742 ! Pericardiacophrenic vein
xref: MA:0002187 ! pericardiacophrenic vein
is_a: UBERON:0001638 ! vein
xref: ncithesaurus:Pericardiacophrenic_Vein ! Pericardiacophrenic Vein

[Term]
id: UBERON:0001591
name: thymic vein
alt_id: UBERON:FMA_4747-MA_0002246
comment: This class was created automatically from a combination of ontologies
synonym: "Thymic tributary of brachiocephalic vein" EXACT []
synonym: "thymic tributary of brachiocephalic vein" EXACT []
synonym: "Thymic vein" EXACT []
xref: FMA:4747 ! Thymic vein
xref: MA:0002246 ! thymic vein
is_a: UBERON:0001638 ! vein
xref: ncithesaurus:Thymic_Vein ! Thymic Vein

[Term]
id: UBERON:0001592
name: bronchial vein
alt_id: UBERON:FMA_4749-MA_0002088
def: "." [Wikipedia:Bronchial_vein]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Bronchial vein" EXACT []
synonym: "Bronchial venous tree" EXACT []
synonym: "bronchial venous tree" EXACT []
xref: FMA:4749 ! Bronchial vein
xref: MA:0002088 ! bronchial vein
is_a: UBERON:0001638 ! vein
xref: ncithesaurus:Bronchial_Vein ! Bronchial Vein

[Term]
id: UBERON:0001593
name: venous plexus
alt_id: UBERON:FMA_4767-MA_0000069
def: "a congregation of multiple veins." [Wikipedia:Venous_plexus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Venous network" EXACT []
synonym: "venous network" EXACT []
synonym: "Venous plexus" EXACT []
xref: FMA:4767 ! Venous plexus
xref: MA:0000069 ! venous plexus
is_a: UBERON:0000063 ! organ segment
relationship: has_part UBERON:0001638 ! vein
relationship: part_of UBERON:0001009 ! circulatory system

[Term]
id: UBERON:0001594
name: azygos vein
alt_id: UBERON:FMA_4838-MA_0002085
def: "." [Wikipedia:Azygos_vein]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Azygos vein" EXACT []
synonym: "Azygos venous tree" EXACT []
synonym: "azygos venous tree" EXACT []
xref: FMA:4838 ! Azygos vein
xref: GAID:528 ! azygos vein
xref: galen:AzygosVein
xref: MA:0002085 ! azygos vein
is_a: UBERON:0001638 ! vein
xref: ncithesaurus:Azygos_Vein ! Azygos Vein

[Term]
id: UBERON:0001595
name: auricular muscle
alt_id: UBERON:FMA_48966-MA_0001229
comment: This class was created automatically from a combination of ontologies
synonym: "Auricular muscle" EXACT []
synonym: "Muscle of auricle" EXACT []
synonym: "muscle of auricle" EXACT []
xref: FMA:48966 ! Auricular muscle
xref: MA:0001229 ! auricular muscle
relationship: part_of UBERON:0001757 ! pinna

[Term]
id: UBERON:0001596
name: intrinsic auricular muscle
alt_id: UBERON:FMA_48967-MA_0001231
comment: This class was created automatically from a combination of ontologies
synonym: "Intrinsic auricular muscle" EXACT []
xref: FMA:48967 ! Intrinsic auricular muscle
xref: MA:0001231 ! intrinsic auricular muscle
is_a: UBERON:0001595 ! auricular muscle
relationship: part_of UBERON:0001595 ! auricular muscle

[Term]
id: UBERON:0001597
name: masseter
alt_id: UBERON:FMA_48996-MA_0002343
def: "." [Wikipedia:Masseter]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Masseter" EXACT []
xref: EHDAA:10561 ! masseter
xref: FMA:48996 ! Masseter
xref: HOG:0000823 ! masseter
xref: MA:0002343 ! masseter
is_a: UBERON:0002376 ! muscle of head
xref: BTO:0001755 ! masseter

[Term]
id: UBERON:0001598
name: temporalis
alt_id: UBERON:FMA_49006-MA_0002390
def: "." [Wikipedia:Temporalis]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Temporal muscle" EXACT []
synonym: "temporal muscle" EXACT []
synonym: "Temporalis" EXACT []
xref: EHDAA:10565 ! temporalis
xref: FMA:49006 ! Temporalis
xref: GAID:148 ! temporal muscle
xref: HOG:0000929 ! temporalis
xref: MA:0002390 ! temporalis
is_a: UBERON:0002376 ! muscle of head
relationship: part_of UBERON:0001444 ! subdivision of head
xref: ncithesaurus:Temporal_Muscle ! Temporal Muscle

[Term]
id: UBERON:0001599
name: stapedius
alt_id: UBERON:FMA_49027-MA_0001220
def: "." [Wikipedia:Stapedius]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Stapedius" EXACT []
xref: FMA:49027 ! Stapedius
xref: GAID:164 ! stapedius
xref: MA:0001220 ! stapedius
relationship: part_of UBERON:0001756 ! middle ear

[Term]
id: UBERON:0001600
name: tensor tympani
alt_id: UBERON:FMA_49028-MA_0001221
def: "." [Wikipedia:Tensor_tympani]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Eustachian muscle" EXACT []
synonym: "eustachian muscle" EXACT []
synonym: "Tensor tympani" EXACT []
xref: FMA:49028 ! Tensor tympani
xref: GAID:166 ! tensor tympani
xref: MA:0001221 ! tensor tympani
relationship: part_of UBERON:0001756 ! middle ear
xref: ncithesaurus:Tensor_Tympani ! Tensor Tympani

[Term]
id: UBERON:0001601
name: extra-ocular muscle
alt_id: UBERON:FMA_49033-MA_0000271
def: "." [Wikipedia:Extra-ocular_muscle]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Extra-ocular muscle" EXACT []
synonym: "Extraocular muscle" EXACT []
synonym: "extraocular muscle" EXACT []
synonym: "Extrinsic muscle of eyeball" EXACT []
synonym: "extrinsic muscle of eyeball" EXACT []
synonym: "eye muscle" EXACT []
xref: AAO:0000156 ! eye_muscles
xref: FMA:49033 ! Extra-ocular muscle
xref: HOG:0000549 ! extraocular muscle
xref: MA:0000271 ! eye muscle
is_a: UBERON:0001577 ! muscle of face
relationship: part_of UBERON:0000970 ! eye
xref: BTO:0001579 ! extraocular muscle

[Term]
id: UBERON:0001602
name: medial rectus
alt_id: UBERON:FMA_49037-ZFA_0000301
def: "." [Wikipedia:Medial_rectus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Medial rectus" EXACT []
xref: FMA:49037 ! Medial rectus
xref: TAO:0000301 ! medial rectus
xref: ZFA:0000301 ! medial rectus
is_a: UBERON:0001601 ! extra-ocular muscle
relationship: part_of UBERON:0002376 ! muscle of head

[Term]
id: UBERON:0001603
name: lateral rectus
alt_id: UBERON:FMA_49038-ZFA_0000383
def: "." [Wikipedia:Lateral_rectus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Lateral rectus" EXACT []
xref: FMA:49038 ! Lateral rectus
xref: TAO:0000383 ! lateral rectus
xref: ZFA:0000383 ! lateral rectus
is_a: UBERON:0001601 ! extra-ocular muscle
relationship: part_of UBERON:0002376 ! muscle of head

[Term]
id: UBERON:0001604
name: levator palpebrae superioris
alt_id: UBERON:FMA_49041-MA_0001272
def: "." [Wikipedia:Levator_palpebrae_superioris]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Levator palpebrae superioris" EXACT []
xref: FMA:49041 ! Levator palpebrae superioris
xref: MA:0001272 ! levator palpebrae superioris
is_a: UBERON:0001601 ! extra-ocular muscle
relationship: part_of UBERON:0001601 ! extra-ocular muscle
relationship: part_of UBERON:0001711 ! eyelid
xref: ncithesaurus:Levator_Palpebrae_Superioris ! Levator Palpebrae Superioris

[Term]
id: UBERON:0001605
name: ciliary muscle
alt_id: UBERON:FMA_49151-MA_0001269
def: "." [Wikipedia:Ciliary_muscle]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Ciliary muscle" EXACT []
xref: BTO:0000654
xref: FMA:49151 ! Ciliary muscle
xref: MA:0001269 ! ciliary muscle
is_a: UBERON:0001601 ! extra-ocular muscle
relationship: part_of UBERON:0001775 ! ciliary body
xref: ncithesaurus:Ciliary_Muscle ! Ciliary Muscle

[Term]
id: UBERON:0001606
name: muscle of iris
alt_id: UBERON:FMA_49154-MA_0001287
def: "." [Wikipedia:Iris_muscle]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Iris muscle" EXACT []
synonym: "iris muscle" EXACT []
synonym: "Muscle of iris" EXACT []
xref: FMA:49154 ! Muscle of iris
xref: MA:0001287 ! iris muscle
intersection_of: UBERON:0001630 ! muscle organ
intersection_of: part_of UBERON:0001769 ! iris
relationship: part_of UBERON:0001769 ! iris

[Term]
id: UBERON:0001607
name: sphincter pupillae
alt_id: UBERON:FMA_49157-MA_0001289
def: "." [Wikipedia:Sphincter_pupillae]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Sphincter pupillae" EXACT []
xref: FMA:49157 ! Sphincter pupillae
xref: MA:0001289 ! sphincter pupillae
is_a: UBERON:0001606 ! muscle of iris

[Term]
id: UBERON:0001608
name: dilatator pupillae
alt_id: UBERON:FMA_49158-MA_0001288
def: "." [Wikipedia:Dilator_pupillae]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Dilatator pupillae" EXACT []
synonym: "Dilator muscle of pupil" EXACT []
synonym: "dilator muscle of pupil" EXACT []
synonym: "Dilator of pupil" EXACT []
synonym: "dilator of pupil" EXACT []
synonym: "Dilator pupillae" EXACT []
synonym: "dilator pupillae" EXACT []
xref: FMA:49158 ! Dilatator pupillae
xref: MA:0001288 ! dilatator pupillae
is_a: UBERON:0001606 ! muscle of iris

[Term]
id: UBERON:0001609
name: isthmus of thyroid gland
alt_id: UBERON:FMA_49178-MA_0000727
def: "." [Wikipedia:Thyroid_isthmus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Isthmus glandulae thyroideae" EXACT []
synonym: "isthmus glandulae thyroideae" EXACT []
synonym: "Isthmus of thyroid gland" EXACT []
synonym: "Thyroid gland isthmus" EXACT []
synonym: "thyroid gland isthmus" EXACT []
synonym: "Thyroid isthmus" EXACT []
synonym: "thyroid isthmus" EXACT []
xref: FMA:49178 ! Isthmus of thyroid gland
xref: MA:0000727 ! thyroid gland isthmus
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0002046 ! thyroid follicle
xref: ncithesaurus:Thyroid_Gland_Isthmus ! Thyroid Gland Isthmus

[Term]
id: UBERON:0001610
name: lingual artery
alt_id: UBERON:FMA_49526-MA_0001992
def: "The lingual artery arises from the external carotid between the superior thyroid and facial artery[WP]." [Wikipedia:Lingual_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Lingual artery" EXACT []
synonym: "Lingual branch of external carotid artery" EXACT []
synonym: "lingual branch of external carotid artery" EXACT []
xref: FMA:49526 ! Lingual artery
xref: MA:0001992 ! lingual artery
xref: OpenCyc:Mx4rvfqDCZwpEbGdrcN5Y29ycA
is_a: UBERON:0001637 ! artery
xref: ncithesaurus:Lingual_Artery ! Lingual Artery

[Term]
id: UBERON:0001611
name: sublingual artery
alt_id: UBERON:FMA_49543-MA_0002049
def: "." [Wikipedia:Sublingual_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Sublingual artery" EXACT []
synonym: "Sublingual branch of lingual artery" EXACT []
synonym: "sublingual branch of lingual artery" EXACT []
xref: FMA:49543 ! Sublingual artery
xref: MA:0002049 ! sublingual artery
is_a: UBERON:0001637 ! artery
xref: ncithesaurus:Sublingual_Artery ! Sublingual Artery

[Term]
id: UBERON:0001612
name: facial artery
alt_id: UBERON:FMA_49549-MA_0001950
def: "." [Wikipedia:Facial_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "External maxillary artery" EXACT []
synonym: "external maxillary artery" EXACT []
synonym: "Facial artery" EXACT []
xref: FMA:49549 ! Facial artery
xref: MA:0001950 ! facial artery
is_a: UBERON:0001637 ! artery
intersection_of: UBERON:0001637 ! artery
intersection_of: part_of UBERON:0001456 ! face
xref: ncithesaurus:Facial_Artery ! Facial Artery

[Term]
id: UBERON:0001613
name: occipital artery
alt_id: UBERON:FMA_49586-MA_0002009
def: "." [Wikipedia:Occipital_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Occipital artery" EXACT []
xref: FMA:49586 ! Occipital artery
xref: MA:0002009 ! occipital artery
is_a: UBERON:0001637 ! artery
xref: ncithesaurus:Occipital_Artery ! Occipital Artery

[Term]
id: UBERON:0001614
name: superficial temporal artery
alt_id: UBERON:FMA_49650-MA_0002062
def: "." [Wikipedia:Superficial_temporal_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Superficial temporal artery" EXACT []
xref: FMA:49650 ! Superficial temporal artery
xref: MA:0002062 ! superficial temporal artery
xref: OpenCyc:Mx4rv33WkZwpEbGdrcN5Y29ycA
is_a: UBERON:0001632 ! temporal artery
xref: BTO:0003747 ! superficial temporal artery

[Term]
id: UBERON:0001615
name: transverse facial artery
alt_id: UBERON:FMA_49657-MA_0002068
def: "." [Wikipedia:Transverse_facial_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Transverse facial artery" EXACT []
xref: FMA:49657 ! Transverse facial artery
xref: MA:0002068 ! transverse facial artery
is_a: UBERON:0001637 ! artery
xref: ncithesaurus:Transverse_Facial_Artery ! Transverse Facial Artery

[Term]
id: UBERON:0001616
name: maxillary artery
alt_id: UBERON:FMA_49675-MA_0001919
def: "." [Wikipedia:Maxillary_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Internal maxillary artery" EXACT []
synonym: "internal maxillary artery" EXACT []
synonym: "Maxillary artery" EXACT []
xref: EHDAA:7357 ! maxillary artery
xref: FMA:49675 ! Maxillary artery
xref: GAID:498 ! maxillary artery
xref: MA:0001919 ! maxillary artery
is_a: UBERON:0001637 ! artery
xref: ncithesaurus:Maxillary_Artery ! Maxillary Artery

[Term]
id: UBERON:0001617
name: mental artery
alt_id: UBERON:FMA_49701-MA_0002002
def: "." [Wikipedia:Mental_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Mental artery" EXACT []
synonym: "Mental branch of inferior alveolar artery" EXACT []
synonym: "mental branch of inferior alveolar artery" EXACT []
xref: FMA:49701 ! Mental artery
xref: MA:0002002 ! mental artery
is_a: UBERON:0001637 ! artery
xref: ncithesaurus:Mental_Artery ! Mental Artery

[Term]
id: UBERON:0001618
name: buccal artery
alt_id: UBERON:FMA_49754-MA_0001924
def: "." [Wikipedia:Buccal_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Buccal artery" EXACT []
xref: FMA:49754 ! Buccal artery
xref: MA:0001924 ! buccal artery
is_a: UBERON:0001637 ! artery
xref: ncithesaurus:Buccal_Artery ! Buccal Artery

[Term]
id: UBERON:0001619
name: ophthalmic artery
alt_id: UBERON:FMA_49868-MA_0002011
def: "." [Wikipedia:Ophthalmic_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Ophthalmic artery" EXACT []
xref: EHDAA:7363 ! ophthalmic artery
xref: FMA:49868 ! Ophthalmic artery
xref: GAID:503 ! ophthalmic artery
xref: MA:0002011 ! ophthalmic artery
xref: OpenCyc:Mx4rvcCxpJwpEbGdrcN5Y29ycA
is_a: UBERON:0001637 ! artery

[Term]
id: UBERON:0001620
name: central retinal artery
alt_id: UBERON:FMA_49879-MA_0002038
def: "." [Wikipedia:Central_retinal_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Central artery of retina" EXACT []
synonym: "central artery of retina" EXACT []
synonym: "Central retinal artery" EXACT []
synonym: "Retinal artery" EXACT []
synonym: "retinal artery" EXACT []
synonym: "Zinn's artery" EXACT []
synonym: "zinn's artery" EXACT []
xref: FMA:49879 ! Central retinal artery
xref: GAID:508 ! retinal artery
xref: MA:0002038 ! retinal artery
is_a: UBERON:0001637 ! artery
xref: ncithesaurus:Retinal_Artery ! Retinal Artery

[Term]
id: UBERON:0001621
name: coronary artery
alt_id: UBERON:FMA_49893-MA_0002453
def: "Systemic artery which supplies the heart." [Wikipedia:Coronary_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Coronary arterial tree" EXACT []
synonym: "coronary arterial tree" EXACT []
synonym: "Coronary artery" EXACT []
xref: BTO:0000290
xref: FMA:49893 ! Coronary artery
xref: galen:CoronaryArtery
xref: MA:0002453 ! coronary artery
is_a: UBERON:0001637 ! artery
relationship: part_of UBERON:0000948 ! heart
xref: ncithesaurus:Coronary_Artery ! Coronary Artery

[Term]
id: UBERON:0001622
name: lacrimal artery
alt_id: UBERON:FMA_49927-MA_0001988
def: "." [Wikipedia:Lacrimal_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Lacrimal artery" EXACT []
xref: FMA:49927 ! Lacrimal artery
xref: MA:0001988 ! lacrimal artery
is_a: UBERON:0001637 ! artery
xref: ncithesaurus:Lacrimal_Artery ! Lacrimal Artery

[Term]
id: UBERON:0001623
name: dorsal nasal artery
alt_id: UBERON:FMA_50000-MA_0001945
def: "." [Wikipedia:Dorsal_nasal_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Dorsal nasal artery" EXACT []
synonym: "Dorsal nasal branch of ophthalmic artery" EXACT []
synonym: "dorsal nasal branch of ophthalmic artery" EXACT []
synonym: "External nasal artery" EXACT []
synonym: "external nasal artery" EXACT []
xref: FMA:50000 ! Dorsal nasal artery
xref: MA:0001945 ! dorsal nasal artery
is_a: UBERON:0001637 ! artery
xref: ncithesaurus:Dorsal_Nasal_Artery ! Dorsal Nasal Artery

[Term]
id: UBERON:0001624
name: anterior cerebral artery
alt_id: UBERON:FMA_50028-MA_0001915
def: "." [Wikipedia:Anterior_cerebral_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Anterior cerebral artery" EXACT []
xref: EHDAA:5296 ! anterior cerebral artery
xref: FMA:50028 ! Anterior cerebral artery
xref: GAID:485 ! anterior cerebral artery
xref: MA:0001915 ! anterior cerebral artery
xref: OpenCyc:Mx4rv8biO5wpEbGdrcN5Y29ycA
is_a: UBERON:0001637 ! artery
xref: ncithesaurus:Anterior_Cerebral_Artery ! Anterior Cerebral Artery

[Term]
id: UBERON:0001625
name: right coronary artery
alt_id: UBERON:FMA_50039-MA_0002455
def: "Coronary artery which emerges from the anterior aortic sinus, between the right auricle and the pulmonary trunk, and supplies the right side of the heart." [Wikipedia:Right_coronary_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Right coronary arterial tree" EXACT []
synonym: "right coronary arterial tree" EXACT []
synonym: "Right coronary artery" EXACT []
xref: FMA:50039 ! Right coronary artery
xref: MA:0002455 ! right coronary artery
is_a: UBERON:0001621 ! coronary artery
xref: ncithesaurus:Right_Coronary_Artery ! Right Coronary Artery

[Term]
id: UBERON:0001626
name: left coronary artery
alt_id: UBERON:FMA_50040-MA_0002454
def: "Coronary artery which emerges from the left posterior aortic sinus, between the left auricle and the pulmonary trunk, and supplies the left side of the heart." [Wikipedia:Left_coronary_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Left coronary arterial tree" EXACT []
synonym: "left coronary arterial tree" EXACT []
synonym: "Left coronary artery" EXACT []
xref: FMA:50040 ! Left coronary artery
xref: MA:0002454 ! left coronary artery
is_a: UBERON:0001621 ! coronary artery
xref: ncithesaurus:Left_Coronary_Artery ! Left Coronary Artery

[Term]
id: UBERON:0001627
name: middle cerebral artery
alt_id: UBERON:FMA_50079-MA_0001935
def: "." [Wikipedia:Middle_cerebral_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Middle cerebral artery" EXACT []
synonym: "Sylvian artery" EXACT []
synonym: "sylvian artery" EXACT []
xref: EHDAA:5298 ! middle cerebral artery
xref: FMA:50079 ! Middle cerebral artery
xref: GAID:487 ! middle cerebral artery
xref: MA:0001935 ! middle cerebral artery
xref: OpenCyc:Mx4rvh3qQ5wpEbGdrcN5Y29ycA
is_a: UBERON:0001637 ! artery
xref: ncithesaurus:Middle_Cerebral_Artery ! Middle Cerebral Artery

[Term]
id: UBERON:0001628
name: posterior communicating artery
alt_id: UBERON:FMA_50084-MA_0002023-ZFA_0005001
def: "An artery that connects caudal division of the internal carotid artery and the basal communicating artery to the basilar artery. <a href='ZFIN_jump?record=ZDB-PUB-010205-5'>Isogai et al. 2001.</a>" [Wikipedia:Posterior_communicating_artery, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "caudal communicating segment" RELATED []
synonym: "PCA" RELATED []
synonym: "PCS" RELATED []
synonym: "Posterior communicating artery" EXACT []
synonym: "posterior communicating segment of the basilar artery" RELATED []
xref: EHDAA:3352 ! posterior communicating artery
xref: FMA:50084 ! Posterior communicating artery
xref: MA:0002023 ! posterior communicating artery
xref: TAO:0005001 ! posterior communicating artery
xref: ZFA:0005001 ! posterior communicating artery
is_a: UBERON:0001637 ! artery
xref: ncithesaurus:Posterior_Communicating_Artery ! Posterior Communicating Artery

[Term]
id: UBERON:0001629
name: carotid body
alt_id: UBERON:FMA_50095-MA_0002463
def: "." [Wikipedia:Carotid_body]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Carotid body" EXACT []
xref: BTO:0000204
xref: FMA:50095 ! Carotid body
xref: GAID:813 ! carotid body
xref: MA:0002463 ! carotid body
is_a: UBERON:0000062 ! organ
relationship: part_of UBERON:0001009 ! circulatory system
xref: ncithesaurus:Carotid_Body ! Carotid Body

[Term]
id: UBERON:0001630
name: muscle organ
alt_id: UBERON:FMA_5022-MIAA_0000302-XAO_0000174
def: "Organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work[GO]. Nonparenchymatous organ that primarily consists of skeletal muscle tissue aggregated into macroscopic fasciculi by connective tissue; together with other muscles, it constitutes the muscular system. Examples: biceps, diaphragm, masseter, right third external intercostal muscle, external oblique, levator ani, serratus anterior[FMA]. // A body tissue consisting of long cells that contract when stimulated and produce motion. // Portion of tissue composed of contractile fibers." [GO:0007517, Wikipedia:Skeletal_muscle]
subset: uberon_slim
synonym: "adult somatic muscle" RELATED []
synonym: "Muscle organ" EXACT []
xref: BTO:0001103
xref: FMA:5022 ! Muscle organ
xref: GAID:131 ! muscle
xref: MA:0000015 ! muscle organ
xref: OpenCyc:Mx4rv2kf-5wpEbGdrcN5Y29ycA
xref: TAO:0005145 ! muscle
xref: XAO:0000172 ! muscle
xref: ZFA:0005145 ! muscle
is_a: UBERON:0000062 ! organ
relationship: part_of UBERON:0001015 ! muscle system

[Term]
id: UBERON:0001631
name: thoracic duct
alt_id: UBERON:FMA_5031-ZFA_0005110
def: "Lymphatic trunk that connects all tributaries of the thoracic duct tree to the trunk of the left brachiocephalic vein. Examples: There is only one thoracic duct tree." [Wikipedia:Thoracic_duct]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Thoracic duct" EXACT []
synonym: "Trunk of thoracic duct tree" EXACT []
synonym: "trunk of thoracic duct tree" EXACT []
xref: FMA:5031 ! Thoracic duct
xref: GAID:1290 ! thoracic duct
xref: MA:0002801 ! thoracic duct
xref: TAO:0005110 ! thoracic duct
xref: ZFA:0005110 ! thoracic duct
is_a: UBERON:0001473 ! lymphatic vessel
relationship: develops_from UBERON:0002065 ! postcardinal vein
xref: ncithesaurus:Thoracic_Duct ! Thoracic Duct

[Term]
id: UBERON:0001632
name: temporal artery
alt_id: UBERON:FMA_50438-MA_0002061
def: "." [Wikipedia:Temporal_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Temporal artery" EXACT []
xref: FMA:50438 ! Temporal artery
xref: GAID:489 ! temporal artery
xref: MA:0002061 ! temporal artery
is_a: UBERON:0001637 ! artery
xref: ncithesaurus:Temporal_Artery ! Temporal Artery

[Term]
id: UBERON:0001633
name: basilar artery
alt_id: UBERON:FMA_50542-MA_0001920-ZFA_0005002
def: "." [Wikipedia:Basilar_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "BA" RELATED []
synonym: "Basilar artery" EXACT []
xref: EHDAA:5285 ! basilar artery
xref: FMA:50542 ! Basilar artery
xref: GAID:474 ! basilar artery
xref: HOG:0000237 ! basilar artery
xref: MA:0001920 ! basilar artery
xref: TAO:0005002 ! basilar artery
xref: ZFA:0005002 ! basilar artery
is_a: UBERON:0001637 ! artery
relationship: part_of UBERON:0002200 ! vasculature of head
xref: ncithesaurus:Basilar_Artery ! Basilar Artery

[Term]
id: UBERON:0001634
name: mesencephalic artery
alt_id: UBERON:FMA_50570-ZFA_0001068
def: "Develops from the proximal portion of the primitive mesencephalic artery. <a href='ZFIN_jump?record=ZDB-PUB-010205-5'>Isogai et al.2001.</a>" [ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Mesencephalic artery" EXACT []
synonym: "MsA" RELATED []
xref: FMA:50570 ! Mesencephalic artery
xref: TAO:0001068 ! mesencephalic artery
xref: ZFA:0001068 ! mesencephalic artery
is_a: UBERON:0001637 ! artery

[Term]
id: UBERON:0001635
name: superior cerebellar artery
alt_id: UBERON:FMA_50573-MA_0001934
def: "." [Wikipedia:Superior_cerebellar_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Superior cerebellar artery" EXACT []
xref: FMA:50573 ! Superior cerebellar artery
xref: MA:0001934 ! superior cerebellar artery
is_a: UBERON:0001637 ! artery
relationship: part_of UBERON:0001633 ! basilar artery
xref: ncithesaurus:Superior_Cerebellar_Artery ! Superior Cerebellar Artery

[Term]
id: UBERON:0001636
name: posterior cerebral artery
alt_id: UBERON:FMA_50583-MA_0002022
def: "." [Wikipedia:Posterior_cerebral_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Posterior cerebral artery" EXACT []
xref: FMA:50583 ! Posterior cerebral artery
xref: GAID:488 ! posterior cerebral artery
xref: MA:0002022 ! posterior cerebral artery
is_a: UBERON:0001637 ! artery
relationship: part_of UBERON:0001633 ! basilar artery
xref: ncithesaurus:Posterior_Cerebral_Artery ! Posterior Cerebral Artery

[Term]
id: UBERON:0001637
name: artery
alt_id: UBERON:FMA_50720-MA_0000061-MA_0000064-MIAA_0000034-XAO_0000114-ZFA_0000005
def: "A vessel carrying blood away from the heart" [GO:0014824]
comment: in FMA an artery is a tree
subset: uberon_slim
synonym: "arterial blood vessel" EXACT []
synonym: "Arterial subtree" EXACT []
synonym: "arterial subtree" EXACT []
synonym: "arterial system" RELATED []
synonym: "Arterial tree organ part" EXACT []
synonym: "arterial tree organ part" EXACT []
synonym: "Arterial vessel" EXACT []
synonym: "arterial vessel" EXACT []
synonym: "Artery" EXACT []
xref: BTO:0000573
xref: EFO:0000814 ! artery
xref: FMA:50720 ! Artery
xref: GAID:468 ! artery
xref: galen:Artery
xref: HOG:0001251 ! artery
xref: MA:0000064 ! artery
xref: MAT:0000034 ! artery
xref: MIAA:0000034 ! artery
xref: ncithesaurus:Artery
xref: OpenCyc:Mx4rvVjknZwpEbGdrcN5Y29ycA
xref: TAO:0000005 ! artery
xref: XAO:0000114 ! artery
xref: ZFA:0000005 ! artery
is_a: UBERON:0001981 ! blood vessel

[Term]
id: UBERON:0001638
name: vein
alt_id: UBERON:FMA_50723-MA_0000066-MA_0000067-MIAA_0000037-XAO_0000115-ZFA_0000082
def: "Subdivision of venous tree (organ) which consists of branching sets of tubes (venous trunks) that form a tree; together with other venous trees (organ part), it constitutes a venous tree (organ). Examples: subclavian venous tree, jugular tree, extrahepatic portal tree, common iliac venous tree. // Any of the tubular branching vessels that carry blood from the capillaries toward the heart." [NLM:vein, Wikipedia:Vein]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Vein" EXACT []
synonym: "venous blood vessel" EXACT []
synonym: "Venous subtree" EXACT []
synonym: "venous subtree" EXACT []
synonym: "venous system" RELATED []
synonym: "Venous tree organ part" EXACT []
synonym: "venous tree organ part" EXACT []
synonym: "Venous vessel" EXACT []
synonym: "venous vessel" EXACT []
xref: BTO:0000234
xref: EFO:0000816 ! vein
xref: FMA:50723 ! Vein
xref: GAID:492 ! vein
xref: HOG:0001252 ! vein
xref: MA:0000066 ! venous blood vessel
xref: MA:0000067 ! vein
xref: MAT:0000037 ! vein
xref: MIAA:0000037 ! vein
xref: OpenCyc:Mx4rvVjkWpwpEbGdrcN5Y29ycA
xref: TAO:0000082 ! vein
xref: XAO:0000115 ! vein
xref: ZFA:0000082 ! vein
is_a: UBERON:0001981 ! blood vessel
xref: ncithesaurus:Vein ! Vein

[Term]
id: UBERON:0001639
name: hepatic portal vein
alt_id: UBERON:FMA_50735-MA_0002132-ZFA_0005090
def: "." [Wikipedia:Hepatic_portal_vein]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Hepatic portal tree" EXACT []
synonym: "hepatic portal tree" EXACT []
synonym: "Hepatic portal vein" EXACT []
synonym: "HPV" RELATED []
synonym: "primary hepatic portal veins" RELATED []
xref: FMA:50735 ! Hepatic portal vein
xref: HOG:0000642 ! hepatic portal vein
xref: MA:0002132 ! hepatic portal vein
xref: TAO:0005090 ! hepatic portal vein
xref: ZFA:0005090 ! hepatic portal vein
is_a: UBERON:0002017 ! portal vein
intersection_of: UBERON:0002017 ! portal vein
intersection_of: part_of UBERON:0002107 ! liver

[Term]
id: UBERON:0001640
name: celiac artery
alt_id: UBERON:FMA_50737-MA_0001931
def: "." [Wikipedia:Celiac_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Celiac artery" EXACT []
synonym: "Celiac tree" EXACT []
synonym: "celiac tree" EXACT []
synonym: "Coeliac artery" EXACT []
synonym: "coeliac artery" RELATED []
xref: FMA:50737 ! Celiac artery
xref: GAID:483 ! celiac artery
xref: MA:0001931 ! celiac artery
is_a: UBERON:0001637 ! artery
xref: ncithesaurus:Coeliac_Artery ! Coeliac Artery

[Term]
id: UBERON:0001641
name: transverse sinus
alt_id: UBERON:FMA_50763-MA_0001868
def: "." [Wikipedia:Transverse_sinus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Lateral sinus" EXACT []
synonym: "lateral sinus" EXACT []
synonym: "Transverse sinus" EXACT []
xref: FMA:50763 ! Transverse sinus
xref: MA:0001868 ! transverse sinus
is_a: UBERON:0001638 ! vein

[Term]
id: UBERON:0001642
name: superior sagittal sinus
alt_id: UBERON:FMA_50767-MA_0001867
def: "." [Wikipedia:Superior_sagittal_sinus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Superior sagittal sinus" EXACT []
xref: FMA:50767 ! Superior sagittal sinus
xref: MA:0001867 ! superior sagittal sinus
xref: OpenCyc:Mx4rv9naEJwpEbGdrcN5Y29ycA
is_a: UBERON:0001638 ! vein
xref: ncithesaurus:Superior_Sagittal_Sinus ! Superior Sagittal Sinus

[Term]
id: UBERON:0001643
name: oculomotor nerve
alt_id: UBERON:FMA_50864-MA_0001095-XAO_0003090-ZFA_0000405
def: "Cranial nerve which connects the midbrain to the extra-ocular and intra-ocular muscles. // Cranial nerve that runs to the eye muscles." [ISBN:0471209627, Wikipedia:Oculomotor_nerve]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "CN-III" RELATED []
synonym: "cranial nerve III" RELATED []
synonym: "occulomotor" RELATED []
synonym: "oculomotor III nerve" EXACT []
synonym: "oculomotor iii nerve" EXACT []
synonym: "Oculomotor nerve" EXACT []
synonym: "Oculomotor nerve [III]" EXACT []
synonym: "oculomotor nerve [iii]" EXACT []
synonym: "Oculomotor nerve tree" EXACT []
synonym: "oculomotor nerve tree" EXACT []
synonym: "Third cranial nerve" EXACT []
synonym: "third cranial nerve" EXACT []
xref: FMA:50864 ! Oculomotor nerve
xref: GAID:829 ! oculomotor nerve
xref: HOG:0000692 ! oculomotor nerve
xref: MA:0001095 ! oculomotor III nerve
xref: NIF_GrossAnatomy:birnlex_1646 ! Oculomotor nerve
xref: TAO:0000405 ! cranial nerve III
xref: XAO:0003090 ! cranial nerve III
xref: ZFA:0000405 ! cranial nerve III
is_a: UBERON:0001785 ! cranial nerve
xref: ncithesaurus:Oculomotor_Nerve ! Oculomotor Nerve

[Term]
id: UBERON:0001644
name: trochlear nerve
alt_id: UBERON:FMA_50865-MA_0001105-XAO_0003091-ZFA_0000600
def: "Cranial nerve that runs to the eye muscles." [ISBN:0471209627, Wikipedia:Trochlear_nerve]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "CN-IV" RELATED []
synonym: "cranial nerve IV" RELATED []
synonym: "Fourth cranial nerve" EXACT []
synonym: "fourth cranial nerve" EXACT []
synonym: "pathetic nerve" RELATED []
synonym: "Superior oblique nerve" EXACT []
synonym: "superior oblique nerve" EXACT []
synonym: "trochlear" RELATED []
synonym: "trochlear IV nerve" EXACT []
synonym: "trochlear iv nerve" EXACT []
synonym: "Trochlear nerve" EXACT []
synonym: "Trochlear nerve [IV]" EXACT []
synonym: "trochlear nerve [iv]" EXACT []
synonym: "Trochlear nerve tree" EXACT []
synonym: "trochlear nerve tree" EXACT []
xref: FMA:50865 ! Trochlear nerve
xref: GAID:838 ! trochlear nerve
xref: HOG:0000705 ! trochlear nerve
xref: MA:0001105 ! trochlear IV nerve
xref: NIF_GrossAnatomy:birnlex_1654 ! Trochlear nerve
xref: TAO:0000600 ! cranial nerve IV
xref: XAO:0003091 ! cranial nerve IV
xref: ZFA:0000600 ! cranial nerve IV
is_a: UBERON:0001785 ! cranial nerve
xref: ncithesaurus:Trochlear_Nerve ! Trochlear Nerve

[Term]
id: UBERON:0001645
name: trigeminal nerve
alt_id: UBERON:FMA_50866-MA_0001100-XAO_0003092-ZFA_0000697
def: "Cranial nerve that branches into the ophthalmic (supplying the skin of the nose and upper jaw) and the mandibular (supplying the lower jaw)." [ISBN:0471209627, Wikipedia:Trigeminal_nerve]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "CN-V" RELATED []
synonym: "cranial nerve V" RELATED []
synonym: "Fifth cranial nerve" EXACT []
synonym: "fifth cranial nerve" EXACT []
synonym: "Trigeminal nerve" EXACT []
synonym: "Trigeminal nerve [V]" EXACT []
synonym: "trigeminal nerve [v]" EXACT []
synonym: "Trigeminal nerve tree" EXACT []
synonym: "trigeminal nerve tree" EXACT []
synonym: "trigeminal V nerve" EXACT []
synonym: "trigeminal v nerve" EXACT []
xref: BTO:0001072
xref: FMA:50866 ! Trigeminal nerve
xref: GAID:726 ! trigeminal nerve
xref: HOG:0000704 ! trigeminal nerve
xref: MA:0001100 ! trigeminal V nerve
xref: NIF_GrossAnatomy:birnlex_869 ! Trigeminal nerve
xref: TAO:0000697 ! cranial nerve V
xref: XAO:0003092 ! cranial nerve V
xref: ZFA:0000697 ! cranial nerve V
is_a: UBERON:0001785 ! cranial nerve
xref: ncithesaurus:Trigeminal_Nerve ! Trigeminal Nerve

[Term]
id: UBERON:0001646
name: abducens nerve
alt_id: UBERON:FMA_50867-MA_0001087-XAO_0003093-ZFA_0000310
def: "Cranial nerve that runs to the eye muscles." [ISBN:0471209627, Wikipedia:Abducens_nerve]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Abducens nerve" EXACT []
synonym: "Abducens nerve [VI]" EXACT []
synonym: "abducens nerve [vi]" EXACT []
synonym: "Abducens nerve tree" EXACT []
synonym: "abducens nerve tree" EXACT []
synonym: "abducens VI nerve" EXACT []
synonym: "abducens vi nerve" EXACT []
synonym: "Abducent nerve" EXACT []
synonym: "abducent nerve" RELATED []
synonym: "Abducent nerve [VI]" EXACT []
synonym: "abducent nerve [vi]" EXACT []
synonym: "CN-VI" RELATED []
synonym: "cranial nerve VI" RELATED []
synonym: "Lateral rectus nerve" EXACT []
synonym: "lateral rectus nerve" EXACT []
synonym: "Nervus abducens" EXACT []
synonym: "nervus abducens" EXACT []
synonym: "Sixth cranial nerve" EXACT []
synonym: "sixth cranial nerve" EXACT []
xref: FMA:50867 ! Abducens nerve
xref: GAID:824 ! abducens nerve
xref: HOG:0000697 ! abducens nerve
xref: MA:0001087 ! abducens VI nerve
xref: NIF_GrossAnatomy:birnlex_876 ! Abducens nerve
xref: TAO:0000310 ! cranial nerve VI
xref: XAO:0003093 ! cranial nerve VI
xref: ZFA:0000310 ! cranial nerve VI
is_a: UBERON:0001785 ! cranial nerve
xref: ncithesaurus:Abducens_Nerve ! Abducens Nerve

[Term]
id: UBERON:0001647
name: facial nerve
alt_id: UBERON:FMA_50868-MA_0001091-XAO_0003094-ZFA_0000664
def: "Cranial nerve that branches into the supraorbital (supplying the skin of the eye region and the lateral line organs here), the palatine (to the roof of the buccal cavity), and the hyomandibular (dividing into the jugular and mental branches)." [ISBN:0471209627, Wikipedia:Facial_nerve]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Branchiomeric cranial nerve" EXACT []
synonym: "branchiomeric cranial nerve" EXACT []
synonym: "CN-VII" RELATED []
synonym: "cranial nerve VII" RELATED []
synonym: "Facial nerve" EXACT []
synonym: "Facial nerve [VII]" EXACT []
synonym: "facial nerve [vii]" EXACT []
synonym: "Facial nerve tree" EXACT []
synonym: "facial nerve tree" EXACT []
synonym: "facial VII nerve" EXACT []
synonym: "facial vii nerve" EXACT []
synonym: "Seventh cranial nerve" EXACT []
synonym: "seventh cranial nerve" EXACT []
xref: FMA:50868 ! Facial nerve
xref: GAID:719 ! facial nerve
xref: HOG:0000706 ! facial nerve
xref: MA:0001091 ! facial VII nerve
xref: NIF_GrossAnatomy:birnlex_827 ! Facial nerve
xref: TAO:0000664 ! cranial nerve VII
xref: XAO:0003094 ! cranial nerve VII
xref: ZFA:0000664 ! cranial nerve VII
is_a: UBERON:0001785 ! cranial nerve
intersection_of: UBERON:0001021 ! nerve
intersection_of: part_of UBERON:0001456 ! face
relationship: part_of UBERON:0001033 ! gustatory system
xref: ncithesaurus:Facial_Nerve ! Facial Nerve

[Term]
id: UBERON:0001648
name: vestibulocochlear nerve
alt_id: UBERON:FMA_50869-FMA_53431-MA_0001109-XAO_0003095-ZFA_0000247
def: "Cranial nerve that runs to the ear." [ISBN:0471209627, Wikipedia:Vestibulocochlear_nerve]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Acoustic nerve" EXACT []
synonym: "acoustic nerve" EXACT []
synonym: "Acoustic nerve (Crosby)" EXACT []
synonym: "acoustic nerve (crosby)" EXACT []
synonym: "Auditory nerve" EXACT []
synonym: "auditory nerve" EXACT []
synonym: "CN-VIII" RELATED []
synonym: "Cochlear nerve" EXACT []
synonym: "cochlear nerve" EXACT []
synonym: "Cochlear root of acoustic nerve" EXACT []
synonym: "cochlear root of acoustic nerve" EXACT []
synonym: "Cochlear root of eighth cranial nerve" EXACT []
synonym: "cochlear root of eighth cranial nerve" EXACT []
synonym: "Cochlear-vestibular nerve" EXACT []
synonym: "cochlear-vestibular nerve" EXACT []
synonym: "Cochleovestibular nerve" EXACT []
synonym: "cochleovestibular nerve" EXACT []
synonym: "cranial nerve VIII" RELATED []
synonym: "Eighth cranial nerve" EXACT []
synonym: "eighth cranial nerve" EXACT []
synonym: "octaval nerve" RELATED []
synonym: "Stato-acoustic nerve" EXACT []
synonym: "stato-acoustic nerve" EXACT []
synonym: "Statoacoustic nerve" EXACT []
synonym: "statoacoustic nerve" RELATED []
synonym: "Vestibulocochlear nerve" EXACT []
synonym: "Vestibulocochlear nerve [VIII]" EXACT []
synonym: "vestibulocochlear nerve [viii]" EXACT []
synonym: "Vestibulocochlear nerve tree" EXACT []
synonym: "vestibulocochlear nerve tree" EXACT []
synonym: "vestibulocochlear VIII nerve" EXACT []
synonym: "vestibulocochlear viii nerve" EXACT []
xref: FMA:50869 ! Vestibulocochlear nerve
xref: FMA:53431 ! Cochlear nerve
xref: GAID:723 ! cochlear nerve
xref: GAID:839 ! vestibulocochlear nerve
xref: HOG:0000695 ! vestibulocochlear nerve
xref: MA:0001109 ! vestibulocochlear VIII nerve
xref: NIF_GrossAnatomy:birnlex_890 ! Vestibulocochlear nerve
xref: OpenCyc:Mx4rvVjMFZwpEbGdrcN5Y29ycA
xref: TAO:0000247 ! cranial nerve VIII
xref: XAO:0003095 ! cranial nerve VIII
xref: ZFA:0000247 ! cranial nerve VIII
is_a: UBERON:0001785 ! cranial nerve
relationship: continuous_with UBERON:0001844 ! cochlea
xref: ncithesaurus:Cochlear_Nerve ! Cochlear Nerve
xref: BTO:0003490 ! vestibulocochlear nerve

[Term]
id: UBERON:0001649
name: glossopharyngeal nerve
alt_id: UBERON:FMA_50870-MA_0001093-XAO_0003096-ZFA_0000668
def: "Cranial nerve that branches into the ramus communicans (to the skin), the pretrematic (to the walls of the pharynx and mouth, viscero-sensory fibers), and the larval post-trematic branch (lost in the adult)." [ISBN:0471209627, Wikipedia:Glossopharyngeal_nerve]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "CN-IX" RELATED []
synonym: "cranial nerve IX" RELATED []
synonym: "glossopharyngeal IX nerve" EXACT []
synonym: "glossopharyngeal ix nerve" EXACT []
synonym: "Glossopharyngeal nerve" EXACT []
synonym: "Glossopharyngeal nerve [IX]" EXACT []
synonym: "glossopharyngeal nerve [ix]" EXACT []
synonym: "Glossopharyngeal nerve tree" EXACT []
synonym: "glossopharyngeal nerve tree" EXACT []
synonym: "Ninth cranial nerve" EXACT []
synonym: "ninth cranial nerve" EXACT []
xref: FMA:50870 ! Glossopharyngeal nerve
xref: GAID:827 ! glossopharyngeal nerve
xref: HOG:0000701 ! glossopharyngeal nerve
xref: MA:0001093 ! glossopharyngeal IX nerve
xref: NIF_GrossAnatomy:birnlex_899 ! Glossopharyngeal nerve
xref: TAO:0000668 ! cranial nerve IX
xref: XAO:0003096 ! cranial nerve IX
xref: ZFA:0000668 ! cranial nerve IX
is_a: UBERON:0001785 ! cranial nerve
relationship: part_of UBERON:0001033 ! gustatory system
xref: ncithesaurus:Glossopharyngeal_Nerve ! Glossopharyngeal Nerve

[Term]
id: UBERON:0001650
name: hypoglossal nerve
alt_id: UBERON:FMA_50871-MA_0001094
def: "Nerve that innervates all the intrinsic and all but one of the extrinsic muscles of the tongue." [GO:0021566, Wikipedia:Hypoglossal_nerve]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Hypoglossal nerve" EXACT []
synonym: "Hypoglossal nerve [XII]" EXACT []
synonym: "hypoglossal nerve [xii]" EXACT []
synonym: "Hypoglossal nerve tree" EXACT []
synonym: "hypoglossal nerve tree" EXACT []
synonym: "hypoglossal XII nerve" EXACT []
synonym: "hypoglossal xii nerve" EXACT []
synonym: "Twelfth cranial nerve" EXACT []
synonym: "twelfth cranial nerve" EXACT []
xref: FMA:50871 ! Hypoglossal nerve
xref: GAID:828 ! hypoglossal nerve
xref: HOG:0000693 ! hypoglossal nerve
xref: MA:0001094 ! hypoglossal XII nerve
xref: NIF_GrossAnatomy:birnlex_820 ! Hypoglossal nerve
xref: OpenCyc:Mx4rv9eWA5wpEbGdrcN5Y29ycA
is_a: UBERON:0001785 ! cranial nerve
xref: ncithesaurus:Hypoglossal_Nerve ! Hypoglossal Nerve
xref: BTO:0003386 ! hypoglossal nerve

[Term]
id: UBERON:0001651
name: right pulmonary artery
alt_id: UBERON:FMA_50872-MA_0002500
def: "." [Wikipedia:Right_pulmonary_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Right main pulmonary artery" EXACT []
synonym: "right main pulmonary artery" EXACT []
synonym: "Right pulmonary arterial tree" EXACT []
synonym: "right pulmonary arterial tree" EXACT []
synonym: "Right pulmonary artery" EXACT []
xref: FMA:50872 ! Right pulmonary artery
xref: MA:0002500 ! right pulmonary artery
is_a: UBERON:0002012 ! pulmonary artery
xref: ncithesaurus:Right_Pulmonary_Artery ! Right Pulmonary Artery

[Term]
id: UBERON:0001652
name: left pulmonary artery
alt_id: UBERON:FMA_50873-MA_0002032
def: "." [Wikipedia:Left_pulmonary_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Left main pulmonary artery" EXACT []
synonym: "left main pulmonary artery" EXACT []
synonym: "Left pulmonary arterial tree" EXACT []
synonym: "left pulmonary arterial tree" EXACT []
synonym: "Left pulmonary artery" EXACT []
xref: FMA:50873 ! Left pulmonary artery
xref: galen:LeftPulmonaryArtery
xref: MA:0002032 ! left pulmonary artery
is_a: UBERON:0002012 ! pulmonary artery
xref: ncithesaurus:Left_Pulmonary_Artery ! Left Pulmonary Artery

[Term]
id: UBERON:0001653
name: facial vein
alt_id: UBERON:FMA_50874-MA_0002115
def: "." [Wikipedia:Facial_vein]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Facial vein" EXACT []
xref: FMA:50874 ! Facial vein
xref: MA:0002115 ! facial vein
is_a: UBERON:0001638 ! vein
intersection_of: UBERON:0001638 ! vein
intersection_of: part_of UBERON:0001456 ! face
xref: ncithesaurus:Facial_Vein ! Facial Vein

[Term]
id: UBERON:0001654
name: supra-orbital vein
alt_id: UBERON:FMA_50904-MA_0002228
def: "." [Wikipedia:Supra-orbital_vein]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Supra-orbital vein" EXACT []
synonym: "Supraorbital vein" EXACT []
synonym: "supraorbital vein" EXACT []
xref: FMA:50904 ! Supra-orbital vein
xref: MA:0002228 ! supraorbital vein
is_a: UBERON:0001638 ! vein
xref: ncithesaurus:Supra-orbital_Vein ! Supraorbital Vein

[Term]
id: UBERON:0001655
name: submental vein
alt_id: UBERON:FMA_50925-MA_0002223
comment: This class was created automatically from a combination of ontologies
synonym: "Submental vein" EXACT []
xref: FMA:50925 ! Submental vein
xref: MA:0002223 ! submental vein
is_a: UBERON:0001638 ! vein
xref: ncithesaurus:Submental_Vein ! Submental Vein

[Term]
id: UBERON:0001656
name: retromandibular vein
alt_id: UBERON:FMA_50928-MA_0002117
def: "." [Wikipedia:Retromandibular_vein]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "posterior facial vein" EXACT []
synonym: "Retromandibular vein" EXACT []
xref: FMA:50928 ! Retromandibular vein
xref: MA:0002117 ! posterior facial vein
xref: OpenCyc:Mx4rv0bn95wpEbGdrcN5Y29ycA
is_a: UBERON:0001653 ! facial vein
xref: ncithesaurus:Temporo-maxillary_Vein ! Retromandibular Vein

[Term]
id: UBERON:0001657
name: superficial temporal vein
alt_id: UBERON:FMA_50932-MA_0002242
def: "." [Wikipedia:Superficial_temporal_vein]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Superficial temporal vein" EXACT []
xref: FMA:50932 ! Superficial temporal vein
xref: MA:0002242 ! superficial temporal vein
is_a: UBERON:0001671 ! temporal vein
xref: ncithesaurus:Superficial_Temporal_Vein ! Superficial Temporal Vein
xref: BTO:0003748 ! superficial temporal vein

[Term]
id: UBERON:0001658
name: middle temporal vein
alt_id: UBERON:FMA_50935-MA_0002241
comment: This class was created automatically from a combination of ontologies
synonym: "Middle temporal vein" EXACT []
xref: FMA:50935 ! Middle temporal vein
xref: MA:0002241 ! middle temporal vein
is_a: UBERON:0001671 ! temporal vein

[Term]
id: UBERON:0001659
name: transverse facial vein
alt_id: UBERON:FMA_50938-MA_0002247
def: "." [Wikipedia:Transverse_facial_vein]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Transverse facial vein" EXACT []
xref: FMA:50938 ! Transverse facial vein
xref: MA:0002247 ! transverse facial vein
is_a: UBERON:0001638 ! vein

[Term]
id: UBERON:0001660
name: maxillary vein
alt_id: UBERON:FMA_50941-MA_0002169
def: "." [Wikipedia:Maxillary_vein]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Maxillary vein" EXACT []
xref: FMA:50941 ! Maxillary vein
xref: MA:0002169 ! maxillary vein
is_a: UBERON:0001638 ! vein
xref: ncithesaurus:Internal_Maxillary_Vein ! Maxillary Vein

[Term]
id: UBERON:0001661
name: deep temporal vein
alt_id: UBERON:FMA_50954-MA_0002240
comment: This class was created automatically from a combination of ontologies
synonym: "Deep temporal vein" EXACT []
xref: FMA:50954 ! Deep temporal vein
xref: MA:0002240 ! deep temporal vein
is_a: UBERON:0001671 ! temporal vein
xref: ncithesaurus:Deep_Temporal_Vein ! Deep Temporal Vein

[Term]
id: UBERON:0001662
name: anterior auricular vein
alt_id: UBERON:FMA_50956-MA_0002083
comment: This class was created automatically from a combination of ontologies
synonym: "Anterior auricular vein" EXACT []
xref: FMA:50956 ! Anterior auricular vein
xref: MA:0002083 ! anterior auricular vein
is_a: UBERON:0001638 ! vein
xref: ncithesaurus:Anterior_Auricular_Vein ! Anterior Auricular Vein

[Term]
id: UBERON:0001663
name: cerebral vein
alt_id: UBERON:FMA_50981-MA_0002096
comment: This class was created automatically from a combination of ontologies
synonym: "Cerebral vein" EXACT []
xref: FMA:50981 ! Cerebral vein
xref: GAID:530 ! cerebral vein
xref: MA:0002096 ! cerebral vein
is_a: UBERON:0001638 ! vein
xref: ncithesaurus:Cerebral_Vein ! Cerebral Vein

[Term]
id: UBERON:0001664
name: inferior cerebral vein
alt_id: UBERON:FMA_50986-MA_0002097
def: "." [Wikipedia:Inferior_cerebral_vein]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Inferior cerebral vein" EXACT []
xref: FMA:50986 ! Inferior cerebral vein
xref: MA:0002097 ! inferior cerebral vein
is_a: UBERON:0001663 ! cerebral vein

[Term]
id: UBERON:0001665
name: triceps surae
alt_id: UBERON:FMA_51062-MA_0002400
def: "." [Wikipedia:Triceps_surae]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "sural triceps" RELATED []
synonym: "Triceps surae" EXACT []
xref: FMA:51062 ! Triceps surae
xref: MA:0002400 ! triceps surae
is_a: UBERON:0001630 ! muscle organ
xref: ncithesaurus:Triceps_Surae ! Triceps Surae

[Term]
id: UBERON:0001666
name: flexor digitorum longus
alt_id: UBERON:FMA_51071-MA_0002299
def: "." [Wikipedia:Flexor_digitorum_longus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Flexor digitorum longus" EXACT []
xref: BTO:0000466
xref: FMA:51071 ! Flexor digitorum longus
xref: MA:0002299 ! flexor digitorum longus
is_a: UBERON:0001383 ! muscle of leg
xref: ncithesaurus:Flexor_Digitorum_Longus ! Flexor Digitorum Longus

[Term]
id: UBERON:0001667
name: tibialis posterior
alt_id: UBERON:FMA_51099-MA_0002394
def: "." [Wikipedia:Tibialis_posterior]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "tibialis caudalis" EXACT []
synonym: "Tibialis posterior" EXACT []
xref: BTO:0000867
xref: FMA:51099 ! Tibialis posterior
xref: MA:0002394 ! tibialis caudalis
is_a: UBERON:0001383 ! muscle of leg
xref: ncithesaurus:Tibialis_Caudalis ! Tibialis Caudalis

[Term]
id: UBERON:0001668
name: cerebellar vein
alt_id: UBERON:FMA_51227-MA_0002093
comment: This class was created automatically from a combination of ontologies
synonym: "Cerebellar vein" EXACT []
xref: FMA:51227 ! Cerebellar vein
xref: MA:0002093 ! cerebellar vein
is_a: UBERON:0001638 ! vein
intersection_of: UBERON:0001638 ! vein
intersection_of: part_of UBERON:0002037 ! cerebellum
xref: ncithesaurus:Cerebellar_Vein ! Cerebellar Vein

[Term]
id: UBERON:0001669
name: superior cerebellar vein
alt_id: UBERON:FMA_51232-MA_0002095
def: "." [Wikipedia:Superior_cerebellar_vein]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Superior cerebellar vein" EXACT []
synonym: "Vein of superior cerebellar hemisphere" EXACT []
synonym: "vein of superior cerebellar hemisphere" EXACT []
xref: FMA:51232 ! Superior cerebellar vein
xref: MA:0002095 ! superior cerebellar vein
is_a: UBERON:0001668 ! cerebellar vein

[Term]
id: UBERON:0001670
name: inferior cerebellar vein
alt_id: UBERON:FMA_51233-MA_0002094
def: "." [Wikipedia:Inferior_cerebellar_vein]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Inferior cerebellar vein" EXACT []
synonym: "Inferior vein of cerebellar hemisphere" EXACT []
synonym: "inferior vein of cerebellar hemisphere" EXACT []
xref: FMA:51233 ! Inferior cerebellar vein
xref: MA:0002094 ! inferior cerebellar vein
is_a: UBERON:0001668 ! cerebellar vein

[Term]
id: UBERON:0001671
name: temporal vein
alt_id: UBERON:FMA_51302-MA_0002239
def: "." [Wikipedia:Temporal_vein]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Temporal vein" EXACT []
xref: FMA:51302 ! Temporal vein
xref: MA:0002239 ! temporal vein
is_a: UBERON:0001638 ! vein
xref: ncithesaurus:Temporal_Vein ! Temporal Vein

[Term]
id: UBERON:0001672
name: anterior cerebral vein
alt_id: UBERON:FMA_51306-ZFA_0001067
comment: This class was created automatically from a combination of ontologies
synonym: "ACeV" RELATED []
synonym: "Anterior cerebral vein" EXACT []
synonym: "rostral cerebral vein" RELATED []
xref: FMA:51306 ! Anterior cerebral vein
xref: TAO:0001067 ! anterior cerebral vein
xref: ZFA:0001067 ! anterior cerebral vein
is_a: UBERON:0001663 ! cerebral vein
relationship: part_of UBERON:0002200 ! vasculature of head

[Term]
id: UBERON:0001673
name: central retinal vein
alt_id: UBERON:FMA_51799-MA_0002213
def: "." [Wikipedia:Central_retinal_vein]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Central retinal vein" EXACT []
synonym: "retinal vein" EXACT []
xref: FMA:51799 ! Central retinal vein
xref: GAID:524 ! retinal vein
xref: MA:0002213 ! retinal vein
is_a: UBERON:0001638 ! vein
xref: ncithesaurus:Retinal_Vein ! Retinal Vein

[Term]
id: UBERON:0001674
name: masseteric vein
alt_id: UBERON:FMA_52519-MA_0002167
comment: This class was created automatically from a combination of ontologies
synonym: "Masseteric vein" EXACT []
xref: FMA:52519 ! Masseteric vein
xref: MA:0002167 ! masseteric vein
is_a: UBERON:0001638 ! vein
xref: ncithesaurus:Masseteric_Vein ! Masseteric Vein

[Term]
id: UBERON:0001675
name: trigeminal ganglion
alt_id: UBERON:FMA_52618-XAO_0000427-XAO_0000428-ZFA_0000295
def: "A prominent collection of touch-sensory neurons of the trigeminal or fifth cranial nerve, positioned beside the brain between the eye and the ear. <a href='http://zfin.org/cgi-bin/ZFIN_jump?record=ZDB-PUB-961014-576'>Kimmel et al, 1995.</a>" [Wikipedia:Trigeminal_ganglion, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "gasserian ganglia" RELATED []
synonym: "Gasserian ganglion" EXACT []
synonym: "gasserian ganglion" EXACT []
synonym: "gV" RELATED []
synonym: "Semilunar ganglion" EXACT []
synonym: "semilunar ganglion" EXACT []
synonym: "trigeminal ganglia" RELATED []
synonym: "Trigeminal ganglion" EXACT []
synonym: "trigeminus ganglion" RELATED []
xref: BTO:0001231
xref: EFO:0000903 ! trigeminal ganglion
xref: FMA:52618 ! Trigeminal ganglion
xref: GAID:725 ! trigeminal ganglion
xref: MAT:0000511 ! trigeminal ganglion
xref: TAO:0000295 ! trigeminal ganglion
xref: XAO:0000427 ! gasserian ganglion
xref: XAO:0000428 ! trigeminal ganglion
xref: ZFA:0000295 ! trigeminal ganglion
is_a: UBERON:0001714 ! ganglion of cranial nerve
relationship: develops_from UBERON:0003070 ! trigeminal placode
xref: ncithesaurus:Trigeminal_Ganglion ! Trigeminal Ganglion

[Term]
id: UBERON:0001676
name: occipital bone
alt_id: UBERON:FMA_52735-MA_0001468
def: "." [Wikipedia:Occipital_bone]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Occipital bone" EXACT []
xref: FMA:52735 ! Occipital bone
xref: GAID:227 ! occipital bone
xref: MA:0001468 ! occipital bone
is_a: UBERON:0001474 ! bone
xref: ncithesaurus:Occipital_Bone ! Occipital Bone

[Term]
id: UBERON:0001677
name: sphenoid bone
alt_id: UBERON:FMA_52736-MA_0001472
def: "." [Wikipedia:Sphenoid_bone]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Sphenoid" EXACT []
synonym: "sphenoid" EXACT []
synonym: "Sphenoid bone" EXACT []
synonym: "Sphenoidal bone" EXACT []
synonym: "sphenoidal bone" EXACT []
xref: FMA:52736 ! Sphenoid bone
xref: GAID:230 ! sphenoid bone
xref: MA:0001472 ! sphenoid bone
is_a: UBERON:0001474 ! bone
xref: ncithesaurus:Sphenoid_Bone ! Sphenoid Bone

[Term]
id: UBERON:0001678
name: temporal bone
alt_id: UBERON:FMA_52737-MA_0001476
def: "." [Wikipedia:Temporal_bone]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Temporal bone" EXACT []
xref: EHDAA:6035 ! temporal bone
xref: FMA:52737 ! Temporal bone
xref: GAID:232 ! temporal bone
xref: HOG:0000800 ! temporal bone
xref: MA:0001476 ! temporal bone
xref: OpenCyc:Mx4rvbkAk5wpEbGdrcN5Y29ycA
is_a: UBERON:0001474 ! bone
xref: ncithesaurus:Temporal_Bone ! Temporal Bone

[Term]
id: UBERON:0001679
name: ethmoid
alt_id: UBERON:FMA_52740-MA_0001483-ZFA_0000323
def: "Median unpaired cartilage bone that ossifies as a perichondral lamellae ensheathing the nasal septum anterodorsally and laterally (Harrington, 1955). In adult D. rerio, the center of the mesethmoid remains cartilaginous (Cubbage & Mabee, 1996). The mesethmoid meets the supraethmoid dorsally, the lateral ethmoids posterolaterally, and the vomer and parasphenoid ventrally in synostoses. Anterolaterally the mesthmoid meets the preethmoids in synchondroses." [Wikipedia:Ethmoid, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Ethmoid" EXACT []
synonym: "ethmoid bone" EXACT []
synonym: "Ethmoidal bone" EXACT []
synonym: "ethmoidal bone" EXACT []
synonym: "mesethmoid bone" EXACT []
xref: FMA:52740 ! Ethmoid
xref: GAID:212 ! ethmoid bone
xref: MA:0001483 ! ethmoid bone
xref: TAO:0000323 ! mesethmoid bone
xref: ZFA:0000323 ! mesethmoid bone
is_a: UBERON:0002513 ! endochondral bone
relationship: part_of UBERON:0000477 ! anatomical cluster
relationship: part_of UBERON:0001704 ! viscerocranium
xref: ncithesaurus:Ethmoid_Bone ! Ethmoid Bone

[Term]
id: UBERON:0001680
name: lacrimal bone
alt_id: UBERON:FMA_52741-MA_0001486
def: "." [Wikipedia:Lacrimal_bone]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Lacrimal bone" EXACT []
synonym: "lacrymal bone" RELATED []
xref: FMA:52741 ! Lacrimal bone
xref: HOG:0001149 ! lacrimal bone
xref: MA:0001486 ! lacrimal bone
is_a: UBERON:0000062 ! organ
relationship: part_of UBERON:0001704 ! viscerocranium
xref: ncithesaurus:Lacrimal_Bone ! Lacrimal Bone

[Term]
id: UBERON:0001681
name: nasal bone
alt_id: UBERON:FMA_52745-MA_0001494-ZFA_0000365
def: "Paired dermal bones, likened to a bone tube, positioned lateral to the supraethmoid. Nasal bones are transversed by the anterior most part of the supraorbital canals and bear one neuromast foramen in zebrafish <a href='http://zfin.org/cgi-bin/ZFIN_jump?record=ZDB-PUB-961014-192'>Cubbage and Mabee, 1996.</a>" [Wikipedia:Nasal_bone, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Nasal bone" EXACT []
xref: FMA:52745 ! Nasal bone
xref: GAID:222 ! nasal bone
xref: HOG:0001370 ! nasal bone
xref: MA:0001494 ! nasal bone
xref: TAO:0000365 ! nasal bone
xref: ZFA:0000365 ! nasal bone
is_a: UBERON:0002514 ! intramembranous bone
relationship: part_of UBERON:0000004 ! olfactory apparatus
relationship: part_of UBERON:0000477 ! anatomical cluster
relationship: part_of UBERON:0001704 ! viscerocranium
xref: ncithesaurus:Nasal_Bone ! Nasal Bone

[Term]
id: UBERON:0001682
name: palatine bone
alt_id: UBERON:FMA_52746-MA_0001495
def: "." [Wikipedia:Palatine_bone]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Palatine bone" EXACT []
xref: FMA:52746 ! Palatine bone
xref: MA:0001495 ! palatine bone
is_a: UBERON:0000062 ! organ
relationship: part_of UBERON:0001704 ! viscerocranium
xref: ncithesaurus:Palatine_Bone ! Palatine Bone

[Term]
id: UBERON:0001683
name: zygomatic bone
alt_id: UBERON:FMA_52747-MA_0001497
def: "." [Wikipedia:Zygomatic_bone]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Cheek bone" EXACT []
synonym: "cheek bone" EXACT []
synonym: "Orbital bone" EXACT []
synonym: "orbital bone" EXACT []
synonym: "Zygomatic bone" EXACT []
xref: FMA:52747 ! Zygomatic bone
xref: MA:0001497 ! zygomatic bone
is_a: UBERON:0001474 ! bone
intersection_of: UBERON:0001474 ! bone
intersection_of: part_of UBERON:0001567 ! cheek
relationship: part_of UBERON:0001704 ! viscerocranium

[Term]
id: UBERON:0001684
name: mandible
alt_id: UBERON:FMA_52748-MA_0001487
def: "." [Wikipedia:Mandible]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Lower jaw bone" EXACT []
synonym: "lower jaw bone" EXACT []
synonym: "Mandible" EXACT []
synonym: "Mandibulla" EXACT []
synonym: "mandibulla" EXACT []
xref: EHDAA:8007 ! mandible
xref: FMA:52748 ! Mandible
xref: GAID:68 ! mandible
xref: HAO:0000506 ! mandible
xref: MA:0001487 ! mandible
xref: ncithesaurus:Mandible
is_a: UBERON:0001474 ! bone
intersection_of: UBERON:0001474 ! bone
intersection_of: part_of UBERON:0001710 ! lower jaw
relationship: part_of UBERON:0001710 ! lower jaw
xref: BTO:0001748 ! mandible

[Term]
id: UBERON:0001685
name: hyoid bone
alt_id: UBERON:FMA_52749-MA_0001484
def: "." [Wikipedia:Hyoid_bone]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Hyoid bone" EXACT []
xref: AAO:0000684 ! hyoid_bone
xref: FMA:52749 ! Hyoid bone
xref: GAID:197 ! hyoid bone
xref: MA:0001484 ! hyoid bone
is_a: UBERON:0000062 ! organ
relationship: part_of UBERON:0001704 ! viscerocranium
xref: ncithesaurus:Hyoid_Bone ! Hyoid Bone

[Term]
id: UBERON:0001686
name: auditory ossicle
alt_id: UBERON:FMA_52750-MA_0000254-XAO_0000214
def: "." [Wikipedia:Auditory_ossicle]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "auditory bone" EXACT []
synonym: "Auditory ossicle" EXACT []
synonym: "ear bone" RELATED []
xref: FMA:52750 ! Auditory ossicle
xref: HOG:0000461 ! auditory ossicle
xref: MA:0000254 ! auditory bone
xref: XAO:0000214 ! auditory ossicle
is_a: UBERON:0000062 ! organ
relationship: part_of UBERON:0001756 ! middle ear
xref: ncithesaurus:Auditory_Ossicle ! Auditory Ossicle

[Term]
id: UBERON:0001687
name: stapes
alt_id: UBERON:FMA_52751-MA_0001217
def: "." [Wikipedia:Stapes]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Stapes" EXACT []
synonym: "Stirrup" EXACT []
synonym: "stirrup" EXACT []
xref: FMA:52751 ! Stapes
xref: GAID:868 ! stape
xref: MA:0001217 ! stapes
xref: OpenCyc:Mx4rv5UnkZwpEbGdrcN5Y29ycA
is_a: UBERON:0001686 ! auditory ossicle
xref: ncithesaurus:Stapes ! Stapes

[Term]
id: UBERON:0001688
name: incus
alt_id: UBERON:FMA_52752-MA_0001215
def: "." [Wikipedia:Incus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Incus" EXACT []
xref: FMA:52752 ! Incus
xref: GAID:866 ! incus
xref: MA:0001215 ! incus
is_a: UBERON:0001686 ! auditory ossicle
xref: ncithesaurus:Incus ! Incus

[Term]
id: UBERON:0001689
name: malleus
alt_id: UBERON:FMA_52753-MA_0001216
def: "." [Wikipedia:Malleus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Malleus" EXACT []
xref: FMA:52753 ! Malleus
xref: GAID:867 ! malleu
xref: MA:0001216 ! malleus
is_a: UBERON:0001686 ! auditory ossicle
xref: ncithesaurus:Malleus ! Malleus

[Term]
id: UBERON:0001690
name: ear
alt_id: UBERON:FMA_52780-FMA_78500-MA_0000236-MIAA_0000138-XAO_0000189-ZFA_0001138
def: "Sense organ in vertebrates that is specialized for the detection of sound, and the maintenance of balance. Includes the outer ear and middle ear, which collect and transmit sound waves; and the inner ear, which contains the organs of balance and (except in fish) hearing. Also includes the pinna, the visible part of the outer ear, present in some mammals." [GO:0042471, Wikipedia:Ear]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "auditory apparatus" RELATED []
synonym: "Ear" EXACT []
synonym: "otic vesicle" RELATED []
xref: BTO:0000368
xref: EFO:0000826 ! ear
xref: EHDAA:502 ! ear
xref: FMA:52780 ! Ear
xref: GAID:62 ! ear
xref: galen:Ear
xref: HOG:0000330 ! ear
xref: MA:0000236 ! ear
xref: MAT:0000138 ! ear
xref: MIAA:0000138 ! ear
xref: ncithesaurus:Ear
xref: NIF_GrossAnatomy:birnlex_1062 ! Ear
xref: OpenCyc:Mx4rvVjL05wpEbGdrcN5Y29ycA
xref: XAO:0000189 ! auditory apparatus
is_a: UBERON:0000020 ! sense organ
relationship: part_of UBERON:0000033 ! head
relationship: part_of UBERON:0002105 ! auditory system

[Term]
id: UBERON:0002105
name: auditory system
alt_id: UBERON:FMA_7192-MA_0002443
def: "A sensory system for the sense of hearing[WP]." [Wikipedia:Auditory_system]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Auditory organ system" EXACT []
synonym: "auditory organ system" EXACT []
synonym: "Auditory system" EXACT []
synonym: "auditory system" RELATED []
synonym: "auditory/vestibular system" RELATED []
synonym: "Vestibulo-auditory system" EXACT []
synonym: "vestibulo-auditory system" EXACT []
synonym: "vestibuloauditory system" EXACT []
synonym: "vestibuloauditory system" RELATED []
xref: AAO:0000631 ! vestibuloauditory_system
xref: FMA:7192 ! Auditory system
xref: FMA:78500 ! Vestibulo-auditory system
xref: TAO:0001138 ! vestibuloauditory system
xref: MA:0002443 ! auditory system
xref: ZFA:0001138 ! vestibuloauditory system
xref: OpenCyc:Mx4rvViwtJwpEbGdrcN5Y29ycA
is_a: UBERON:0001032 ! sense organ system
relationship: capable_of GO:0007605 ! sensory perception of sound
intersection_of: UBERON:0001032 ! sense organ system
intersection_of: capable_of GO:0007605 ! sensory perception of sound
xref: ncithesaurus:Auditory_System ! Auditory System

[Term]
id: UBERON:0001691
name: external ear
alt_id: UBERON:FMA_52781-MA_0000258-MIAA_0000147-XAO_0000190
def: "Part of the ear external to the tympanum (eardrum). It consists of a tube (the external auditory meatus) that directs sound waves on to the tympanum, and may also include the external pinna, which extends beyond the skull[GO]." [GO:0042473, Wikipedia:External_ear]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Auricular region" EXACT []
synonym: "auricular region" EXACT []
synonym: "Auricular region of head" EXACT []
synonym: "auricular region of head" EXACT []
synonym: "External ear" EXACT []
synonym: "outer ear" EXACT []
xref: EHDAA:3786 ! external ear
xref: EHDAA:5343 ! auricular region
xref: EHDAA:5352 ! auricular region
xref: FMA:52781 ! External ear
xref: GAID:104 ! external ear
xref: HOG:0000311 ! external ear
xref: MA:0000258 ! outer ear
xref: MAT:0000147 ! outer ear
xref: MIAA:0000147 ! outer ear
xref: ncithesaurus:External_Ear
xref: NIF_GrossAnatomy:birnlex_1705 ! Outer ear
xref: XAO:0000190 ! external ear
is_a: UBERON:0001444 ! subdivision of head
relationship: part_of UBERON:0001690 ! ear
xref: BTO:0002100 ! external ear

[Term]
id: UBERON:0001692
name: basilar part of occipital bone
alt_id: UBERON:FMA_52858-MA_0001462-ZFA_0000472
def: "Large median unpaired cartilage bone that contacts the exocciptal, epiotic and pterotic dorsally, and the parasphenoid anteriorly. Forms the posteroventral hind margin of the cranium, articulates with the centrum of the first vertebra. Bears a posteroventral pharyngeal process that is flattened ventrally and opposes the pharyngeal teeth of the fifth pair of ceratobranchials." [Wikipedia:Basilar_part_of_occipital_bone, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Basilar part of occipital bone" EXACT []
synonym: "Basioccipital" EXACT []
synonym: "basioccipital" EXACT []
synonym: "basioccipital bone" EXACT []
xref: AAO:0000039 ! basioccipital
xref: FMA:52858 ! Basilar part of occipital bone
xref: HOG:0001152 ! basioccipital bone
xref: MA:0001462 ! basioccipital bone
xref: TAO:0000472 ! basioccipital
xref: ZFA:0000472 ! basioccipital
is_a: UBERON:0002513 ! endochondral bone
relationship: part_of UBERON:0002021 ! occipital lobe

[Term]
id: UBERON:0001693
name: lateral part of occipital bone
alt_id: UBERON:FMA_52859-MA_0001464-ZFA_0000661
def: "Paired cartilage bone that bears a large foramen (lateral occipital foramen). Contacts the supraoccipital dorsally, the epiotic laterally and the basioccipital ventrally. Forms the posterior hind margin of the cranium and borders the lateral and posterior margins of the forum (foramen) magnum." [ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Exoccipital" EXACT []
synonym: "exoccipital" EXACT []
synonym: "exoccipital bone" EXACT []
synonym: "Lateral part of occipital bone" EXACT []
xref: AAO:0000147 ! exoccipital
xref: FMA:52859 ! Lateral part of occipital bone
xref: HOG:0001151 ! exoccipital bone
xref: MA:0001464 ! exoccipital bone
xref: TAO:0000661 ! exoccipital
xref: ZFA:0000661 ! exoccipital
is_a: UBERON:0002513 ! endochondral bone
relationship: part_of UBERON:0002021 ! occipital lobe

[Term]
id: UBERON:0001694
name: petrous part of temporal bone
alt_id: UBERON:FMA_52871-MA_0001477
def: "." [Wikipedia:Petrous_bone]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Pars petrosa (os temporale)" EXACT []
synonym: "pars petrosa (os temporale)" EXACT []
synonym: "Petromastoid part of temporal bone" EXACT []
synonym: "petromastoid part of temporal bone" EXACT []
synonym: "Petrosal bone" EXACT []
synonym: "petrosal bone" EXACT []
synonym: "Petrous bone" EXACT []
synonym: "petrous bone" EXACT []
synonym: "Petrous part of temporal bone" EXACT []
synonym: "temporal bone petrous part" EXACT []
xref: FMA:52871 ! Petrous part of temporal bone
xref: GAID:234 ! petrous bone
xref: MA:0001477 ! temporal bone petrous part
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001678 ! temporal bone

[Term]
id: UBERON:0001695
name: squamous part of temporal bone
alt_id: UBERON:FMA_52883-MA_0001473
comment: This class was created automatically from a combination of ontologies
synonym: "Pars squamosa (os temporale)" EXACT []
synonym: "pars squamosa (os temporale)" EXACT []
synonym: "squamosal bone" EXACT []
synonym: "Squamous bone" EXACT []
synonym: "squamous bone" EXACT []
synonym: "Squamous part of temporal bone" EXACT []
xref: FMA:52883 ! Squamous part of temporal bone
xref: MA:0001473 ! squamosal bone
is_a: UBERON:0001474 ! bone

[Term]
id: UBERON:0001696
name: alveolar process of maxilla
alt_id: UBERON:FMA_52897-MA_0001492
def: "." [Wikipedia:Alveolar_process_of_maxilla]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Alveolar part of maxilla" EXACT []
synonym: "alveolar part of maxilla" EXACT []
synonym: "Alveolar process of maxilla" EXACT []
synonym: "maxilla alveolar process" EXACT []
synonym: "Processus alveolaris (maxilla)" EXACT []
synonym: "processus alveolaris (maxilla)" EXACT []
xref: FMA:52897 ! Alveolar process of maxilla
xref: MA:0001492 ! maxilla alveolar process
is_a: UBERON:0000063 ! organ segment
relationship: part_of UBERON:0002397 ! maxilla

[Term]
id: UBERON:0001697
name: orbit
alt_id: UBERON:FMA_53074-MA_0002482
def: "." [Wikipedia:Orbit_(anatomy)]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Orbit" EXACT []
synonym: "Orbit of skull" EXACT []
synonym: "orbit of skull" EXACT []
xref: AAO:0000343 ! orbit
xref: FMA:53074 ! Orbit
xref: GAID:223 ! orbit
xref: HAO:0000672 ! orbit
xref: MA:0002482 ! orbit
xref: ncithesaurus:Orbit
xref: OpenCyc:Mx4rvW8EgZwpEbGdrcN5Y29ycA
is_a: UBERON:0000061 ! anatomical structure
relationship: part_of UBERON:0001456 ! face

[Term]
id: UBERON:0001698
name: foramen ovale
alt_id: UBERON:FMA_53155-MA_0001873
def: "." [Wikipedia:Foramen_ovale]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Foramen ovale" EXACT []
xref: EHDAA:10627 ! foramen ovale
xref: FMA:53155 ! Foramen ovale
xref: galen:ForamenOvale
xref: HOG:0001189 ! foramen ovale
xref: MA:0001873 ! foramen ovale
is_a: UBERON:0000464 ! anatomical space
relationship: part_of UBERON:0002085 ! interatrial septum

[Term]
id: UBERON:0001699
name: sensory root of facial nerve
alt_id: UBERON:FMA_53410-ZFA_0000679
def: "." [Wikipedia:Intermediate_nerve]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Intermediate nerve" EXACT []
synonym: "intermediate nerve" EXACT []
synonym: "Sensory root of facial nerve" EXACT []
synonym: "Wrisberg's nerve" EXACT []
synonym: "wrisberg's nerve" EXACT []
xref: FMA:53410 ! Sensory root of facial nerve
xref: TAO:0000679 ! sensory root of facial nerve
xref: ZFA:0000679 ! sensory root of facial nerve
is_a: UBERON:0002211 ! segment of nerve
relationship: part_of UBERON:0001896 ! medulla oblongata

[Term]
id: UBERON:0001700
name: geniculate ganglion
alt_id: UBERON:FMA_53414-MA_0001076-ZFA_0001291
def: "." [Wikipedia:Geniculate_ganglion]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "facial ganglion" EXACT []
synonym: "facial VII ganglion" EXACT []
synonym: "facial vii ganglion" EXACT []
synonym: "Ganglion genicularum" EXACT []
synonym: "ganglion genicularum" EXACT []
synonym: "Genicular ganglion" EXACT []
synonym: "genicular ganglion" EXACT []
synonym: "Geniculate ganglion" EXACT []
synonym: "gVII" RELATED []
xref: EHDAA:5567 ! facial VII ganglion
xref: EHDAA:6644 ! facial VII ganglion
xref: FMA:53414 ! Geniculate ganglion
xref: GAID:718 ! geniculate ganglion
xref: HOG:0000707 ! facial VII ganglion
xref: MA:0001076 ! facial VII ganglion
xref: TAO:0001291 ! facial ganglion
xref: ZFA:0001291 ! facial ganglion
is_a: UBERON:0002420 ! basal ganglia
xref: ncithesaurus:Geniculate_Ganglion ! Geniculate Ganglion

[Term]
id: UBERON:0001701
name: glossopharyngeal ganglion
alt_id: UBERON:FMA_53471-ZFA_0001301
comment: This class was created automatically from a combination of ontologies
synonym: "Ganglion of glosspharyngeal nerve" EXACT []
synonym: "ganglion of glosspharyngeal nerve" EXACT []
synonym: "gIX" RELATED []
synonym: "Glossopharyngeal ganglion" EXACT []
synonym: "petrosal ganglion" RELATED []
xref: FMA:53471 ! Glossopharyngeal ganglion
xref: TAO:0001301 ! glossopharyngeal ganglion
xref: ZFA:0001301 ! glossopharyngeal ganglion
is_a: UBERON:0001714 ! ganglion of cranial nerve
relationship: part_of UBERON:0000010 ! peripheral nervous system

[Term]
id: UBERON:0001702
name: eyelash
alt_id: UBERON:FMA_53669-MA_0002702
def: "." [Wikipedia:Eyelash]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Eyelash" EXACT []
xref: FMA:53669 ! Eyelash
xref: GAID:73 ! eyelash
xref: MA:0002702 ! eyelash
xref: OpenCyc:Mx4rvVi41pwpEbGdrcN5Y29ycA
is_a: UBERON:0001037 ! hair
xref: ncithesaurus:Eyelash ! Eyelash

[Term]
id: UBERON:0001703
name: neurocranium
alt_id: UBERON:FMA_53672-ZFA_0001580
def: "Portion of the cranium which encloses the brain." [Wikipedia:Cranium]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Brain Box" EXACT []
synonym: "brain box" EXACT []
synonym: "Neurocranium" EXACT []
xref: FMA:53672 ! Neurocranium
xref: TAO:0001580 ! neurocranium
xref: ZFA:0001580 ! neurocranium
is_a: UBERON:0000061 ! anatomical structure

[Term]
id: UBERON:0001704
name: viscerocranium
alt_id: UBERON:FMA_53673-MA_0000318
comment: This class was created automatically from a combination of ontologies
synonym: "facial bone" RELATED []
synonym: "Facial skeleton" EXACT []
synonym: "facial skeleton" EXACT []
synonym: "Viscerocranium" EXACT []
xref: EHDAA:8361 ! viscerocranium
xref: FMA:53673 ! Viscerocranium
xref: HOG:0000315 ! viscerocranium
xref: MA:0000318 ! viscerocranium
intersection_of: UBERON:0000075 ! subdivision of skeleton
intersection_of: part_of UBERON:0001456 ! face
relationship: part_of UBERON:0002090 ! axial skeleton

[Term]
id: UBERON:0001705
name: nail
alt_id: UBERON:FMA_54326-MA_0002703-MIAA_0000158
def: "a horn-like structure at the end of an animal's finger or toe." [Wikipedia:Nail_(anatomy)]
comment: TODO: check claw vs nail
subset: uberon_slim
synonym: "claw" RELATED []
synonym: "Nail" EXACT []
synonym: "Nail plate" EXACT []
synonym: "nail plate" EXACT []
xref: FMA:54326 ! Nail
xref: GAID:1320 ! nail
xref: MA:0002703 ! nail
xref: MAT:0000158 ! nail
xref: MIAA:0000158 ! nail
xref: XAO:0003103 ! claw
xref: OpenCyc:Mx4rvVjJv5wpEbGdrcN5Y29ycA
is_a: UBERON:0000026 ! appendage
relationship: part_of UBERON:0002544 ! digit
xref: ncithesaurus:Nail ! Nail

[Term]
id: UBERON:0001706
name: nasal septum
alt_id: UBERON:FMA_54375-MA_0000285
def: "." [Wikipedia:Nasal_septum]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Nasal septum" EXACT []
xref: EHDAA:6809 ! nasal septum
xref: FMA:54375 ! Nasal septum
xref: GAID:115 ! nasal septum
xref: HOG:0000017 ! nasal septum
xref: MA:0000285 ! nasal septum
xref: OpenCyc:Mx4rv7e-k5wpEbGdrcN5Y29ycA
is_a: UBERON:0003037 ! septum
relationship: part_of UBERON:0000004 ! olfactory apparatus
xref: ncithesaurus:Nasal_Septum ! Nasal Septum

[Term]
id: UBERON:0001707
name: nasal cavity
alt_id: UBERON:FMA_54378-MA_0000284-ZFA_0000130
def: "an indentation of the olfactory placode, and ends when the pits hollows out to form the nasopharynx." [Wikipedia:Nasal_cavity]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Cavity of nose" EXACT []
synonym: "cavity of nose" EXACT []
synonym: "Nasal cavity" EXACT []
synonym: "nasal pit" RELATED []
synonym: "olfactory cavity" RELATED []
synonym: "olfactory pit" EXACT []
xref: AAO:0000314 ! nasal_cavity
xref: EHDAA:4772 ! olfactory pit
xref: EHDAA:6801 ! nasal cavity
xref: FMA:54378 ! Nasal cavity
xref: GAID:350 ! nasal cavity
xref: HOG:0000271 ! nasal cavity
xref: MA:0000284 ! nasal cavity
xref: TAO:0000130 ! olfactory pit
xref: ZFA:0000130 ! olfactory pit
is_a: UBERON:0002553 ! anatomical cavity
relationship: part_of UBERON:0000004 ! olfactory apparatus
relationship: part_of UBERON:0001557 ! upper respiratory tract
xref: ncithesaurus:Nasal_Cavity ! Nasal Cavity
xref: BTO:0002096 ! nasal cavity

[Term]
id: UBERON:0001708
name: jaw
alt_id: UBERON:FMA_54396-MA_0001905-ZFA_0001227
def: "Skeletal and cartilagenous elements of the first pharyngeal arch." [Wikipedia:Jaw, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Jaw" EXACT []
synonym: "jaw cartilage" RELATED []
synonym: "jaws" RELATED []
synonym: "mandibular arch" EXACT []
synonym: "oral jaw skeleton" RELATED []
synonym: "pharyngeal arch 1 skeleton" RELATED []
synonym: "visceral arch 1" RELATED []
xref: FMA:54396 ! Jaw
xref: GAID:214 ! jaw
xref: galen:Jaw
xref: MA:0001905 ! jaw
xref: OpenCyc:Mx4rvVjjEZwpEbGdrcN5Y29ycA
xref: TAO:0001227 ! mandibular arch
xref: ZFA:0001227 ! mandibular arch skeleton
is_a: UBERON:0002539 ! pharyngeal arch
relationship: part_of UBERON:0001704 ! viscerocranium
xref: ncithesaurus:Jaw ! Jaw
xref: BTO:0001749 ! jaw

[Term]
id: UBERON:0001709
name: upper jaw
alt_id: UBERON:FMA_54397-MA_0001908-XAO_0003087-ZFA_0001272
def: "The dorsal portion of the first pharyngeal arch, comprising the upper jaw." [Wikipedia:Upper_jaw, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "dorsal mandibular arch" RELATED []
synonym: "dorsal visceral arch 2" RELATED []
synonym: "palatoquadrate arch" EXACT []
synonym: "Upper jaw" EXACT []
synonym: "upper pharyngeal jaws" RELATED []
xref: AAO:0000620 ! upper_jaw
xref: EHDAA:8025 ! upper jaw
xref: FMA:54397 ! Upper jaw
xref: HOG:0000454 ! upper jaw
xref: MA:0001908 ! upper jaw
xref: TAO:0001272 ! palatoquadrate arch
xref: XAO:0003087 ! upper jaw
xref: ZFA:0001272 ! palatoquadrate arch
relationship: part_of UBERON:0001708 ! jaw
xref: ncithesaurus:Upper_Jaw ! Upper Jaw

[Term]
id: UBERON:0001710
name: lower jaw
alt_id: UBERON:FMA_54398-MA_0001906-XAO_0003084-ZFA_0001273
def: "The ventral portion of the first pharyngeal arch, comprising the lower jaw." [Wikipedia:Lower_jaw, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Lower jaw" EXACT []
synonym: "mandible" RELATED []
synonym: "mandibular series" RELATED []
synonym: "ventral mandibular arch" EXACT []
xref: AAO:0000272 ! lower_jaw
xref: EHDAA:7995 ! lower jaw
xref: FMA:54398 ! Lower jaw
xref: HOG:0000453 ! lower jaw
xref: MA:0001906 ! lower jaw
xref: TAO:0001273 ! ventral mandibular arch
xref: XAO:0003084 ! lower jaw
xref: ZFA:0001273 ! ventral mandibular arch
relationship: part_of UBERON:0001708 ! jaw
xref: ncithesaurus:Lower_Jaw ! Lower Jaw

[Term]
id: UBERON:0001711
name: eyelid
alt_id: UBERON:FMA_54437-MA_0000268
def: "." [Wikipedia:Eyelid]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Blepharon" EXACT []
synonym: "blepharon" EXACT []
synonym: "Eyelid" EXACT []
synonym: "Palpebra" EXACT []
synonym: "palpebra" RELATED []
xref: EHDAA:9037 ! eyelid
xref: FMA:54437 ! Eyelid
xref: GAID:72 ! eyelid
xref: HOG:0000016 ! eyelid
xref: MA:0000268 ! eyelid
xref: OpenCyc:Mx4rvVi4m5wpEbGdrcN5Y29ycA
is_a: UBERON:0001444 ! subdivision of head
relationship: part_of UBERON:0000970 ! eye
xref: ncithesaurus:Eyelid ! Eyelid
xref: BTO:0002241 ! eyelid

[Term]
id: UBERON:0001712
name: upper eyelid
alt_id: UBERON:FMA_54439-MA_0001267
def: "." [Wikipedia:Upper_eyelid]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Superior eyelid" EXACT []
synonym: "superior eyelid" EXACT []
synonym: "Upper eyelid" EXACT []
xref: FMA:54439 ! Upper eyelid
xref: HOG:0000389 ! upper eyelid
xref: MA:0001267 ! upper eyelid
xref: OpenCyc:Mx4rvg4ohJwpEbGdrcN5Y29ycA
is_a: UBERON:0001711 ! eyelid
xref: ncithesaurus:Upper_Eyelid ! Upper Eyelid

[Term]
id: UBERON:0001713
name: lower eyelid
alt_id: UBERON:FMA_54442-MA_0001263-XAO_0000007
def: "." [Wikipedia:Lower_eyelid]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Inferior eyelid" EXACT []
synonym: "inferior eyelid" EXACT []
synonym: "Lower eyelid" EXACT []
xref: FMA:54442 ! Lower eyelid
xref: HOG:0000388 ! lower eyelid
xref: MA:0001263 ! lower eyelid
xref: OpenCyc:Mx4rvW6GtJwpEbGdrcN5Y29ycA
xref: XAO:0000007 ! lower eyelid
is_a: UBERON:0001711 ! eyelid
is_a: UBERON:0003102 ! surface structure
xref: ncithesaurus:Lower_Eyelid ! Lower Eyelid

[Term]
id: UBERON:0001714
name: ganglion of cranial nerve
alt_id: UBERON:FMA_54502-MA_0000213
def: "." [Wikipedia:Cranial_nerve_ganglion]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "cranial ganglion/nerve" EXACT []
synonym: "Cranial nerve ganglion" EXACT []
synonym: "cranial nerve ganglion" EXACT []
synonym: "Cranial neural ganglion" EXACT []
synonym: "cranial neural ganglion" EXACT []
synonym: "Ganglion of cranial nerve" EXACT []
xref: FMA:54502 ! Ganglion of cranial nerve
xref: MA:0000213 ! cranial ganglion/nerve
is_a: UBERON:0000045 ! ganglion
intersection_of: UBERON:0000045 ! ganglion
intersection_of: part_of UBERON:0001785 ! cranial nerve
relationship: part_of UBERON:0001017 ! central nervous system

[Term]
id: UBERON:0001715
name: oculomotor nuclear complex
alt_id: UBERON:FMA_54510-ZFA_0000553
def: "." [Wikipedia:Nucleus_of_oculomotor_nerve]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "motor nucleus III" RELATED []
synonym: "nIII" RELATED []
synonym: "Nucleus of oculomotor nerve" EXACT []
synonym: "nucleus of oculomotor nerve" EXACT []
synonym: "Nucleus of third cranial nerve" EXACT []
synonym: "nucleus of third cranial nerve" EXACT []
synonym: "Oculomotor nuclear complex" EXACT []
synonym: "Oculomotor nucleus" EXACT []
synonym: "oculomotor nucleus" EXACT []
synonym: "Third cranial nerve nucleus" EXACT []
synonym: "third cranial nerve nucleus" EXACT []
xref: FMA:54510 ! Oculomotor nuclear complex
xref: NIF_GrossAnatomy:birnlex_1240 ! Oculomotor nuclear complex
xref: TAO:0000553 ! oculomotor nucleus
xref: ZFA:0000553 ! oculomotor nucleus
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001016 ! nervous system
xref: ncithesaurus:Oculomotor_Nucleus ! Oculomotor Nucleus

[Term]
id: UBERON:0001716
name: palate
alt_id: UBERON:FMA_54549-FMA_55023-MA_0002476-MA_0002477-MIAA_0000161
def: "Partition that separates the nasal and oral cavities[GO]." [GO:0060021, Wikipedia:Palate]
comment: The soft palate is movable, consisting of muscle fibers sheathed in mucous membrane. It is responsible for closing off the nasal passages during the act of swallowing, and also for closing off the airway. During sneezing, it protects the nasal passage by diverting a portion of the excreted substance to the mouth.
subset: uberon_slim
synonym: "oral roof" EXACT []
synonym: "Palate" EXACT []
synonym: "roof of mouth" EXACT []
xref: FMA:54549 ! Palate
xref: GAID:152 ! palate
xref: MA:0002476 ! palate
xref: ncithesaurus:Palate
is_a: UBERON:0000061 ! anatomical structure
relationship: adjacent_to UBERON:0000167 ! oral cavity
relationship: part_of UBERON:0000165 ! mouth
xref: BTO:0001779 ! palate

[Term]
id: UBERON:0001717
name: spinal nucleus of trigeminal nerve
alt_id: UBERON:FMA_54565-MA_0001053
def: "." [Wikipedia:Spinal_trigeminal_nucleus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Spinal nucleus of cranial nerve V" EXACT []
synonym: "spinal nucleus of cranial nerve v" EXACT []
synonym: "Spinal nucleus of trigeminal nerve" EXACT []
synonym: "spinal trigeminal nucleus" EXACT []
synonym: "Trigeminal nerve spinal tract nucleus" EXACT []
synonym: "trigeminal nerve spinal tract nucleus" EXACT []
synonym: "Trigeminal spinal nucleus" EXACT []
synonym: "trigeminal spinal nucleus" EXACT []
synonym: "trigeminal V spinal sensory nucleus" EXACT []
synonym: "trigeminal v spinal sensory nucleus" EXACT []
xref: FMA:54565 ! Spinal nucleus of trigeminal nerve
xref: GAID:605 ! spinal trigeminal nucleu
xref: MA:0001053 ! trigeminal V spinal sensory nucleus
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0001718
name: mesencephalic nucleus of trigeminal nerve
alt_id: UBERON:FMA_54568-ZFA_0000312
def: "." [Wikipedia:Mesencephalic_nucleus_of_trigeminal_nerve]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Mesencephalic nucleus of trigeminal nerve" EXACT []
synonym: "Mesencephalic trigeminal nucleus" EXACT []
synonym: "mesencephalic trigeminal nucleus" EXACT []
synonym: "Nucleus of mesencephalic root of V" EXACT []
synonym: "nucleus of mesencephalic root of v" EXACT []
synonym: "Trigeminal nerve mesencepahlic nucleus" EXACT []
synonym: "trigeminal nerve mesencepahlic nucleus" EXACT []
xref: FMA:54568 ! Mesencephalic nucleus of trigeminal nerve
xref: NIF_GrossAnatomy:birnlex_1010 ! Mesencephalic nucleus of trigeminal nerve
xref: TAO:0000312 ! mesencephalic nucleus of trigeminal nerve
xref: ZFA:0000312 ! mesencephalic nucleus of trigeminal nerve
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0001719
name: nucleus ambiguus
alt_id: UBERON:FMA_54588-MA_0001050
def: "." [Wikipedia:Nucleus_ambiguus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Ambiguus nucleus" EXACT []
synonym: "ambiguus nucleus" EXACT []
synonym: "Nucleus ambiguus" EXACT []
xref: FMA:54588 ! Nucleus ambiguus
xref: MA:0001050 ! nucleus ambiguus
xref: NIF_GrossAnatomy:birnlex_2650 ! Nucleus ambiguus
is_a: UBERON:0002308 ! nucleus of brain
xref: ncithesaurus:Nucleus_Ambiguus ! Nucleus Ambiguus

[Term]
id: UBERON:0001720
name: cochlear nucleus
alt_id: UBERON:FMA_54603-ZFA_0001638
def: "." [Wikipedia:Cochlear_nucleus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Cochlear nucleus" EXACT []
synonym: "Cochlear nucleus of acoustic nerve" EXACT []
synonym: "cochlear nucleus of acoustic nerve" EXACT []
synonym: "Cochlear nucleus of eighth cranial nerve" EXACT []
synonym: "cochlear nucleus of eighth cranial nerve" EXACT []
synonym: "Nucleus of cochlear nerve" EXACT []
synonym: "nucleus of cochlear nerve" EXACT []
synonym: "statoacoustic (VIII) nucleus" EXACT []
synonym: "statoacoustic (viii) nucleus" EXACT []
synonym: "vestibulocochlear nucleus" RELATED []
xref: FMA:54603 ! Cochlear nucleus
xref: GAID:601 ! cochlear nucleu
xref: ZFA:0001638 ! statoacoustic (VIII) nucleus
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0000988 ! pons
xref: ncithesaurus:Cochlear_Nucleus ! Cochlear Nucleus

[Term]
id: UBERON:0001721
name: inferior vestibular nucleus
alt_id: UBERON:FMA_54608-MA_0001054
def: "." [Wikipedia:Inferior_vestibular_nucleus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Descending vestibular nucleus" EXACT []
synonym: "descending vestibular nucleus" EXACT []
synonym: "Inferior vestibular nucleus" EXACT []
synonym: "Spinal vestibular nucleus" EXACT []
synonym: "spinal vestibular nucleus" EXACT []
xref: FMA:54608 ! Inferior vestibular nucleus
xref: MA:0001054 ! spinal vestibular nucleus
is_a: UBERON:0002308 ! nucleus of brain
xref: ncithesaurus:Spinal_Vestibular_Nucleus ! Spinal Vestibular Nucleus

[Term]
id: UBERON:0001722
name: medial vestibular nucleus
alt_id: UBERON:FMA_54611-MA_0001048
def: "." [Wikipedia:Medial_vestibular_nucleus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Chief vestibular nucleus" EXACT []
synonym: "chief vestibular nucleus" EXACT []
synonym: "Dorsal vestibular nucleus" EXACT []
synonym: "dorsal vestibular nucleus" EXACT []
synonym: "Medial vestibular nucleus" EXACT []
synonym: "Nucleus of Schwalbe" EXACT []
synonym: "nucleus of schwalbe" EXACT []
synonym: "Principal vestibular nucleus" EXACT []
synonym: "principal vestibular nucleus" EXACT []
synonym: "Schwalbe's nucleus" EXACT []
synonym: "schwalbe's nucleus" EXACT []
synonym: "Triangular nucleus" EXACT []
synonym: "triangular nucleus" EXACT []
xref: FMA:54611 ! Medial vestibular nucleus
xref: MA:0001048 ! medial vestibular nucleus
is_a: UBERON:0002308 ! nucleus of brain
xref: ncithesaurus:Medial_Vestibular_Nucleus ! Medial Vestibular Nucleus

[Term]
id: UBERON:0001723
name: tongue
alt_id: UBERON:FMA_54640-MA_0000347-MIAA_0000040-XAO_0000446
def: "The tongue is the movable, muscular organ on the floor of the mouth of most vertebrates, in man other mammals is the principal organ of taste, aids in the prehension of food, in swallowing, and in modifying the voice as in speech[GO]." [GO:0043586, Wikipedia:Tongue]
subset: uberon_slim
synonym: "Tongue" EXACT []
xref: BTO:0001385
xref: EFO:0000833 ! tongue
xref: EHDAA:9144 ! tongue
xref: FMA:54640 ! Tongue
xref: GAID:816 ! tongue
xref: HOG:0000419 ! tongue
xref: MA:0000347 ! tongue
xref: MAT:0000040 ! tongue
xref: MIAA:0000040 ! tongue
xref: OpenCyc:Mx4rvVjmJ5wpEbGdrcN5Y29ycA_53KXLq9EdqAAAACs6hnmQ
xref: XAO:0000446 ! tongue
is_a: UBERON:0000062 ! organ
relationship: develops_from UBERON:0002539 ! pharyngeal arch
relationship: part_of UBERON:0001033 ! gustatory system
xref: ncithesaurus:Tongue ! Tongue

[Term]
id: UBERON:0001724
name: sphenoidal sinus
alt_id: UBERON:FMA_54683-MA_0001795
def: "." [Wikipedia:Sphenoidal_sinus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "sphenoid sinus" EXACT []
synonym: "Sphenoidal sinus" EXACT []
xref: FMA:54683 ! Sphenoidal sinus
xref: GAID:359 ! sphenoid sinus
xref: MA:0001795 ! sphenoid sinus
xref: ncithesaurus:Sphenoid_Sinus
is_a: UBERON:0001825 ! paranasal sinus

[Term]
id: UBERON:0001725
name: cranial synchondrosis
alt_id: UBERON:FMA_54816-MA_0001502
comment: This class was created automatically from a combination of ontologies
synonym: "Cranial synchondrosis" EXACT []
xref: FMA:54816 ! Cranial synchondrosis
xref: MA:0001502 ! cranial synchondrosis
is_a: UBERON:0002215 ! synchondrosis
intersection_of: UBERON:0002215 ! synchondrosis
intersection_of: part_of UBERON:0000032 ! cranial structure

[Term]
id: UBERON:0001726
name: papilla of tongue
alt_id: UBERON:FMA_54819-MA_0001593
comment: This class was created automatically from a combination of ontologies
synonym: "Lingual papilla" EXACT []
synonym: "lingual papilla" EXACT []
synonym: "Papilla of tongue" EXACT []
synonym: "Tongue papilla" EXACT []
synonym: "tongue papilla" EXACT []
xref: FMA:54819 ! Papilla of tongue
xref: MA:0001593 ! tongue papilla
xref: NIF_GrossAnatomy:birnlex_4102 ! Lingual papilla
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001723 ! tongue

[Term]
id: UBERON:0001727
name: taste bud
alt_id: UBERON:FMA_54825-MA_0001591-XAO_0000445-ZFA_0001074
def: "." [Wikipedia:Taste_bud]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Taste bud" EXACT []
synonym: "taste buds" RELATED []
xref: BTO:0000989
xref: FMA:54825 ! Taste bud
xref: GAID:815 ! taste bud
xref: HOG:0000130 ! taste bud
xref: MA:0001591 ! taste bud
xref: NIF_GrossAnatomy:birnlex_4101 ! Taste bud
xref: OpenCyc:Mx4rvVjan5wpEbGdrcN5Y29ycA
xref: TAO:0001074 ! taste bud
xref: XAO:0000445 ! taste bud
xref: ZFA:0001074 ! taste bud
is_a: UBERON:0000064 ! organ part
relationship: develops_from UBERON:0001723 ! tongue
relationship: develops_from UBERON:0001731 ! cavity of pharynx
relationship: part_of UBERON:0001723 ! tongue

[Term]
id: UBERON:0001728
name: nasopharynx
alt_id: UBERON:FMA_54878-MA_0000443
def: "." [Wikipedia:Nasopharynx]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Nasal part of pharynx" EXACT []
synonym: "nasal part of pharynx" EXACT []
synonym: "Nasopharynx" EXACT []
synonym: "Rhinopharynx" EXACT []
synonym: "rhinopharynx" EXACT []
xref: BTO:0000662
xref: EHDAA:7086 ! nasopharynx
xref: FMA:54878 ! Nasopharynx
xref: GAID:339 ! nasopharynx
xref: HOG:0000375 ! nasopharynx
xref: MA:0000443 ! nasopharynx
xref: MAT:0000447 ! nasopharynx
is_a: UBERON:0000477 ! anatomical cluster
relationship: part_of UBERON:0001042 ! pharynx
relationship: part_of UBERON:0001557 ! upper respiratory tract
xref: ncithesaurus:Nasopharynx ! Nasopharynx

[Term]
id: UBERON:0001729
name: oropharynx
alt_id: UBERON:FMA_54879-MA_0000351
def: "." [Wikipedia:Oropharynx]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Oral part of pharynx" EXACT []
synonym: "oral part of pharynx" EXACT []
synonym: "Oropharynx" EXACT []
xref: FMA:54879 ! Oropharynx
xref: GAID:340 ! oropharynx
xref: HOG:0000457 ! oropharynx
xref: MA:0000351 ! oropharynx
xref: MAT:0000446 ! oropharynx
is_a: UBERON:0000477 ! anatomical cluster
relationship: part_of UBERON:0001042 ! pharynx
xref: ncithesaurus:Oropharynx ! Oropharynx

[Term]
id: UBERON:0001730
name: extrinsic ligament of larynx
alt_id: UBERON:FMA_54921-MA_0001756
comment: This class was created automatically from a combination of ontologies
synonym: "Extrinsic ligament of larynx" EXACT []
synonym: "laryngeal extrinsic ligament" EXACT []
xref: FMA:54921 ! Extrinsic ligament of larynx
xref: MA:0001756 ! laryngeal extrinsic ligament
is_a: UBERON:0001743 ! ligament of larynx

[Term]
id: UBERON:0001731
name: cavity of pharynx
alt_id: UBERON:FMA_54935-XAO_0000105
comment: This class was created automatically from a combination of ontologies
synonym: "Cavity of pharynx" EXACT []
synonym: "Lumen of pharynx" EXACT []
synonym: "lumen of pharynx" EXACT []
synonym: "Pharyngeal cavity" EXACT []
synonym: "pharyngeal cavity" EXACT []
xref: FMA:54935 ! Cavity of pharynx
xref: XAO:0000105 ! pharyngeal cavity
is_a: UBERON:0002553 ! anatomical cavity
relationship: develops_from UBERON:0001041 ! foregut
relationship: part_of UBERON:0001042 ! pharynx
xref: BTO:0002097 ! pharyngeal cavity

[Term]
id: UBERON:0001732
name: pharyngeal tonsil
alt_id: UBERON:FMA_54970-MA_0000774
def: "." [Wikipedia:Pharyngeal_tonsil]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Adenoid" EXACT []
synonym: "adenoid" EXACT []
synonym: "Nasopharyngeal tonsil" EXACT []
synonym: "nasopharyngeal tonsil" EXACT []
synonym: "Pharyngeal tonsil" EXACT []
synonym: "Tonsil of Luschka" EXACT []
synonym: "tonsil of luschka" EXACT []
xref: BTO:0000777
xref: FMA:54970 ! Pharyngeal tonsil
xref: GAID:1288 ! adenoid
xref: MA:0000774 ! nasopharyngeal tonsil
is_a: UBERON:0002372 ! tonsil
intersection_of: UBERON:0002372 ! tonsil
intersection_of: part_of UBERON:0001042 ! pharynx
xref: ncithesaurus:Pharyngeal_Tonsil ! Pharyngeal Tonsil

[Term]
id: UBERON:0001733
name: soft palate
alt_id: UBERON:FMA_55021-MA_0002412-MIAA_0000039
def: "soft tissue constituting the back of the roof of the mouth. The soft palate is distinguished from the hard palate at the front of the mouth in that it does not contain bone[WP]. The soft palate is the posterior portion of the palate extending from the posterior edge of the hard palate[GO]." [GO:0060023, Wikipedia:Soft_palate]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "muscular palate" RELATED [Wikipedia:Soft_palate]
synonym: "velum" RELATED [Wikipedia:Soft_palate]
xref: FMA:55021 ! Soft palate
xref: GAID:1284 ! soft palate
xref: MA:0002412 ! soft palate
xref: MAT:0000039 ! soft palate
xref: MIAA:0000039 ! soft palate
xref: ncithesaurus:Soft_Palate
is_a: UBERON:0000479 ! portion of tissue
relationship: part_of UBERON:0001716 ! palate

[Term]
id: UBERON:0001734
name: uvula
alt_id: UBERON:FMA_55022-MA_0001006
def: "Conic projection from the posterior edge of the middle of the soft palate, composed of connective tissue containing a number of racemose glands, and some muscular fibers. The uvula, hanging from the end of the soft palate, is responsible for the sound of snoring. Touching the uvula or the end of the soft palate evokes a strong gag reflex in most people." [Wikipedia:Uvula]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "cerebellum lobule IX" EXACT []
synonym: "cerebellum lobule ix" EXACT []
synonym: "Uvula" EXACT []
synonym: "Uvula of palate" EXACT []
synonym: "uvula of palate" EXACT []
xref: FMA:55022 ! Uvula
xref: GAID:1285 ! uvula
xref: MA:0001006 ! cerebellum lobule IX
xref: ncithesaurus:Uvula
is_a: UBERON:0000477 ! anatomical cluster

[Term]
id: UBERON:0001735
name: tonsillar ring
alt_id: UBERON:FMA_55070-MA_0000752
def: "." [Wikipedia:Waldeyer's_ring]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "oropharyngeal lymphoid tissue" EXACT []
synonym: "Pharyngeal lymphatic ring" EXACT []
synonym: "pharyngeal lymphatic ring" EXACT []
synonym: "Pharyngeal lymphoid ring" EXACT []
synonym: "pharyngeal lymphoid ring" EXACT []
synonym: "Tonsillar ring" EXACT []
synonym: "Waldeyer's ring" EXACT []
synonym: "waldeyer's ring" RELATED []
synonym: "Waldeyer's tonsillar ring" EXACT []
synonym: "waldeyer's tonsillar ring" EXACT []
xref: FMA:55070 ! Tonsillar ring
xref: MA:0000752 ! oropharyngeal lymphoid tissue
is_a: UBERON:0001961 ! mucosa-associated lymphoid tissue
xref: ncithesaurus:Waldeyers_Tonsillar_Ring ! Waldeyer's Tonsillar Ring

[Term]
id: UBERON:0001736
name: submandibular gland
alt_id: UBERON:FMA_55093-MA_0001589
def: "." [Wikipedia:Submandibular_gland]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Submandibular gland" EXACT []
synonym: "Submaxillary gland" EXACT []
synonym: "submaxillary gland" RELATED []
xref: BTO:0001316
xref: FMA:55093 ! Submandibular gland
xref: GAID:942 ! submandibular gland
xref: HOG:0000364 ! submandibular gland
xref: MA:0001589 ! submandibular gland
xref: ncithesaurus:Submandibular_Gland
is_a: UBERON:0001829 ! major salivary gland

[Term]
id: UBERON:0001737
name: larynx
alt_id: UBERON:FMA_55097-MA_0000414-MIAA_0000187-XAO_0003081
def: "Heterogeneous cluster that connects the pharynx to the tracheobronchial tree. Examples: There is only one larynx." [Wikipedia:Larynx]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Larynx" EXACT []
xref: AAO:0000268 ! larynx
xref: BTO:0001208
xref: EFO:0000838 ! larynx
xref: FMA:55097 ! Larynx
xref: GAID:108 ! larynx
xref: galen:Larynx
xref: HOG:0001279 ! larynx
xref: MA:0000414 ! larynx
xref: MAT:0000187 ! larynx
xref: MIAA:0000187 ! larynx
xref: OpenCyc:Mx4rvViOnZwpEbGdrcN5Y29ycA
xref: XAO:0003081 ! larynx
is_a: UBERON:0000477 ! anatomical cluster
relationship: part_of UBERON:0001557 ! upper respiratory tract
xref: ncithesaurus:Larynx ! Larynx

[Term]
id: UBERON:0001738
name: thyroid cartilage
alt_id: UBERON:FMA_55099-MA_0001764
def: "." [Wikipedia:Thyroid_cartilage]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Thyroid cartilage" EXACT []
xref: FMA:55099 ! Thyroid cartilage
xref: GAID:112 ! thyroid cartilage
xref: HOG:0001365 ! thyroid cartilage
xref: MA:0001764 ! thyroid cartilage
is_a: UBERON:0001739 ! laryngeal cartilage
xref: ncithesaurus:Thyroid_Cartilage ! Thyroid Cartilage
xref: BTO:0003655 ! thyroid cartilage

[Term]
id: UBERON:0001739
name: laryngeal cartilage
alt_id: UBERON:FMA_55108-MA_0001758
comment: This class was created automatically from a combination of ontologies
synonym: "Cartilage of larynx" EXACT []
synonym: "cartilage of larynx" EXACT []
synonym: "Laryngeal cartilage" EXACT []
synonym: "larynx cartilage" EXACT []
xref: EHDAA:8157 ! laryngeal cartilages
xref: FMA:55108 ! Laryngeal cartilage
xref: GAID:107 ! laryngeal cartilage
xref: MA:0001758 ! larynx cartilage
xref: ncithesaurus:Laryngeal_Cartilage
is_a: UBERON:0002236 ! costal cartilage
intersection_of: UBERON:0002418 ! cartilage
intersection_of: part_of UBERON:0001737 ! larynx
relationship: part_of UBERON:0001737 ! larynx
xref: BTO:0003660 ! laryngeal cartilage

[Term]
id: UBERON:0001740
name: arytenoid cartilage
alt_id: UBERON:FMA_55109-MA_0001759
def: "." [Wikipedia:Arytenoid_cartilage]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Arytenoid cartilage" EXACT []
xref: AAO:0000674 ! arytenoid_cartilage
xref: FMA:55109 ! Arytenoid cartilage
xref: GAID:109 ! arytenoid cartilage
xref: MA:0001759 ! arytenoid cartilage
is_a: UBERON:0001739 ! laryngeal cartilage
xref: ncithesaurus:Arytenoid_Cartilage ! Arytenoid Cartilage

[Term]
id: UBERON:0001741
name: corniculate cartilage
alt_id: UBERON:FMA_55110-MA_0001885
def: "." [Wikipedia:Corniculate_cartilage]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Cartilage of Santorini" EXACT []
synonym: "cartilage of santorini" EXACT []
synonym: "Corniculate cartilage" EXACT []
synonym: "Santorini's cartilage" EXACT []
synonym: "santorini's cartilage" EXACT []
xref: FMA:55110 ! Corniculate cartilage
xref: MA:0001885 ! corniculate cartilage
is_a: UBERON:0001739 ! laryngeal cartilage
is_a: UBERON:0001996 ! elastic cartilage
xref: ncithesaurus:Corniculate_Cartilage ! Corniculate Cartilage

[Term]
id: UBERON:0001742
name: epiglottic cartilage
alt_id: UBERON:FMA_55112-MA_0001763
def: "." [Wikipedia:Epiglottic_cartilage]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Epiglottic cartilage" EXACT []
xref: FMA:55112 ! Epiglottic cartilage
xref: MA:0001763 ! epiglottic cartilage
is_a: UBERON:0001739 ! laryngeal cartilage
is_a: UBERON:0001996 ! elastic cartilage
xref: ncithesaurus:Epiglottic_Cartilage ! Epiglottic Cartilage

[Term]
id: UBERON:0001743
name: ligament of larynx
alt_id: UBERON:FMA_55131-MA_0001755
comment: This class was created automatically from a combination of ontologies
synonym: "Laryngeal ligament" EXACT []
synonym: "laryngeal ligament" EXACT []
synonym: "larynx ligament" EXACT []
synonym: "Ligament of larynx" EXACT []
xref: FMA:55131 ! Ligament of larynx
xref: MA:0001755 ! larynx ligament
is_a: UBERON:0000211 ! ligament
intersection_of: UBERON:0000211 ! ligament
intersection_of: part_of UBERON:0001737 ! larynx
relationship: part_of UBERON:0001737 ! larynx
xref: ncithesaurus:Laryngeal_Ligament ! Laryngeal Ligament

[Term]
id: UBERON:0001744
name: lymphoid tissue
alt_id: UBERON:FMA_55220-MA_0002436
def: "." [Wikipedia:Lymphoid_tissue]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Lymphatic tissue" EXACT []
synonym: "lymphatic tissue" EXACT []
synonym: "Lymphocytic tissue" EXACT []
synonym: "lymphocytic tissue" EXACT []
synonym: "Lymphoid tissue" EXACT []
xref: BTO:0000753
xref: FMA:55220 ! Lymphoid tissue
xref: GAID:342 ! lymphoid tissue
xref: MA:0002436 ! lymphoid tissue
is_a: UBERON:0000479 ! portion of tissue
relationship: part_of UBERON:0002193 ! hemolymphoid system
xref: ncithesaurus:Lymphoid_Tissue ! Lymphoid Tissue

[Term]
id: UBERON:0001745
name: secondary nodular lymphoid tissue
alt_id: UBERON:FMA_55224-MA_0000744
def: "sites within lymph nodes in peripheral lymph tissues where intense mature B lymphocytes, otherwise known as Centrocytes rapidly proliferate, differentiate, mutate through somatic hypermutation and class switch during antibody responses. Germinal centers are an important part of the B-cell humoral immune response. They develop dynamically after the activation of B-cells by T-dependent antigen. Histologically, the GCs describe microscopically distinguishable parts in lymphoid tissues[WP]. A germinal center is a specialized microenvironment formed when activated B cells enter lymphoid follicles. Germinal centers are the foci for B cell proliferation and somatic hypermutation[GO]." [GO:0002467, Wikipedia:Germinal_center]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "germinal center" EXACT []
synonym: "lymph node germinal center" RELATED []
synonym: "lymph node secondary follicle" EXACT []
synonym: "Peripheral lymphoid tissue" EXACT []
synonym: "peripheral lymphoid tissue" EXACT []
synonym: "Secondary lymphoid nodule" EXACT []
synonym: "secondary lymphoid nodule" EXACT []
synonym: "Secondary lymphoid tissue" EXACT []
synonym: "secondary lymphoid tissue" EXACT []
synonym: "Secondary nodular lymphoid tissue" EXACT []
xref: FMA:55224 ! Secondary nodular lymphoid tissue
xref: GAID:946 ! germinal center
xref: MA:0000744 ! lymph node secondary follicle
is_a: UBERON:0001744 ! lymphoid tissue
relationship: part_of UBERON:0000029 ! lymph node
xref: ncithesaurus:Germinal_Center ! Germinal Center
xref: BTO:0003671 ! germinal center

[Term]
id: UBERON:0001746
name: fibrous capsule of thyroid gland
alt_id: UBERON:FMA_55513-MA_0002675
comment: This class was created automatically from a combination of ontologies
synonym: "Fibrous capsule of thyroid gland" EXACT []
synonym: "Thyroid capsule" EXACT []
synonym: "thyroid capsule" EXACT []
synonym: "thyroid gland capsule" EXACT []
xref: FMA:55513 ! Fibrous capsule of thyroid gland
xref: MA:0002675 ! thyroid gland capsule
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0002046 ! thyroid follicle
xref: ncithesaurus:Thyroid_Gland_Capsule ! Thyroid Gland Capsule

[Term]
id: UBERON:0001747
name: parenchyma of thyroid gland
alt_id: UBERON:FMA_55515-MA_0000730
comment: This class was created automatically from a combination of ontologies
synonym: "Parenchyma of thyroid gland" EXACT []
synonym: "Thyroid gland parenchyma" EXACT []
synonym: "thyroid gland parenchyma" EXACT []
xref: FMA:55515 ! Parenchyma of thyroid gland
xref: MA:0000730 ! thyroid gland parenchyma
is_a: UBERON:0000064 ! organ part
intersection_of: UBERON:0000353 ! parenchyma
intersection_of: OBO_REL:part_of UBERON:0002046 ! thyroid follicle
relationship: part_of UBERON:0002046 ! thyroid follicle

[Term]
id: UBERON:0001748
name: capsule of parathyroid gland
alt_id: UBERON:FMA_55566-MA_0002676
comment: This class was created automatically from a combination of ontologies
synonym: "Capsule of parathyroid gland" EXACT []
synonym: "Parathyroid gland capsule" EXACT []
synonym: "parathyroid gland capsule" EXACT []
xref: FMA:55566 ! Capsule of parathyroid gland
xref: MA:0002676 ! parathyroid gland capsule
is_a: UBERON:0003893 ! capsule
relationship: part_of UBERON:0001132 ! parathyroid gland
xref: ncithesaurus:Parathyroid_Gland_Capsule ! Parathyroid Gland Capsule

[Term]
id: UBERON:0001749
name: parenchyma of parathyroid gland
alt_id: UBERON:FMA_55569-MA_0002677
comment: This class was created automatically from a combination of ontologies
synonym: "Parathyroid gland parenchyma" EXACT []
synonym: "parathyroid gland parenchyma" EXACT []
synonym: "Parenchyma of parathyroid gland" EXACT []
xref: FMA:55569 ! Parenchyma of parathyroid gland
xref: MA:0002677 ! parathyroid gland parenchyma
is_a: UBERON:0000064 ! organ part
intersection_of: UBERON:0000353 ! parenchyma
intersection_of: OBO_REL:part_of UBERON:0001132 ! parathyroid gland
relationship: part_of UBERON:0001132 ! parathyroid gland

[Term]
id: UBERON:0001750
name: lacrimal apparatus
alt_id: UBERON:FMA_55605-MA_0000274
def: "." [Wikipedia:Lacrimal_apparatus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Lacrimal apparatus" EXACT []
xref: FMA:55605 ! Lacrimal apparatus
xref: GAID:901 ! lacrimal apparatus
xref: MA:0000274 ! lacrimal apparatus
is_a: UBERON:0000477 ! anatomical cluster
relationship: part_of UBERON:0000970 ! eye
xref: ncithesaurus:Lacrimal_Apparatus ! Lacrimal Apparatus

[Term]
id: UBERON:0001751
name: dentine
alt_id: UBERON:FMA_55628-MA_0002542-ZFA_0005143
def: "Substance of tooth produced by odontoblasts; surrounds the pulp of the tooth and is subjacent to enamel and cement. // Mineralized collagen containing substance that forms the tooth structure." [Wikipedia:Dentine, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Dentin" EXACT []
synonym: "dentin" EXACT []
synonym: "Dentine" EXACT []
synonym: "Dentine of tooth" EXACT []
synonym: "dentine of tooth" EXACT []
xref: FMA:55628 ! Dentine
xref: GAID:1272 ! dentin
xref: MA:0002542 ! dentin
xref: TAO:0005143 ! dentine
xref: ZFA:0005143 ! dentine
is_a: UBERON:0001973 ! substance of tooth
relationship: develops_from UBERON:0000924 ! ectoderm
xref: ncithesaurus:Dentin ! Dentin
xref: BTO:0003453 ! dentin

[Term]
id: UBERON:0001752
name: enamel
alt_id: UBERON:FMA_55629-MA_0002543-ZFA_0005142
def: "A dentine-like hypermineralized substance that covers the tooth tip." [Wikipedia:Enamel, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Enamel" EXACT []
synonym: "Enamel of tooth" EXACT []
synonym: "enamel of tooth" EXACT []
synonym: "enameloid" EXACT []
synonym: "tooth enamel" EXACT []
xref: FMA:55629 ! Enamel
xref: MA:0002543 ! enamel
xref: TAO:0005142 ! enameloid
xref: ZFA:0005142 ! enameloid
is_a: UBERON:0001973 ! substance of tooth
xref: ncithesaurus:Enamel ! Enamel
xref: BTO:0001844 ! tooth enamel

[Term]
id: UBERON:0001753
name: cement
alt_id: UBERON:FMA_55630-MA_0002541
def: "Substance of tooth produced by cementoblasts; surrounds the dentine of the root of the tooth." []
comment: This class was created automatically from a combination of ontologies
synonym: "Cement" EXACT []
synonym: "Cement of tooth" EXACT []
synonym: "cement of tooth" EXACT []
synonym: "cementum" EXACT []
synonym: "Cementum of tooth" EXACT []
synonym: "cementum of tooth" EXACT []
xref: FMA:55630 ! Cement
xref: MA:0002541 ! cementum
is_a: UBERON:0001973 ! substance of tooth
xref: ncithesaurus:Cementum ! Cementum

[Term]
id: UBERON:0001754
name: dental pulp
alt_id: UBERON:FMA_55631-MA_0001599
def: "." [Wikipedia:Dental_pulp]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Dental pulp" EXACT []
synonym: "Pulp of tooth" EXACT []
synonym: "pulp of tooth" EXACT []
xref: BTO:0000339
xref: FMA:55631 ! Dental pulp
xref: GAID:1270 ! dental pulp
xref: HOG:0001469 ! dental pulp
xref: MA:0001599 ! dental pulp
is_a: UBERON:0002384 ! connective tissue
relationship: part_of UBERON:0001091 ! tooth
xref: ncithesaurus:Dental_Pulp ! Dental Pulp

[Term]
id: UBERON:0001755
name: stylohyal
alt_id: UBERON:FMA_56472-ZFA_0001511
def: "The interhyal is a small rod-like element that connects the ventral and dorsal parts of the hyoid arch. It articulates laterally with the posterior end of the epihyal and medially at the cartilaginous junction between the hyomandibula and the symplectic. It remains cartilaginous in adult zebrafish and other cypriniforms." [ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
synonym: "Distal part of styloid process" EXACT []
synonym: "distal part of styloid process" EXACT []
synonym: "interhyal bone" RELATED []
synonym: "interhyal cartilage" EXACT []
synonym: "Stylohyal" EXACT []
xref: FMA:56472 ! Stylohyal
xref: TAO:0001511 ! interhyal cartilage
xref: ZFA:0001511 ! interhyal cartilage
is_a: UBERON:0000479 ! portion of tissue
relationship: part_of UBERON:0000477 ! anatomical cluster

[Term]
id: UBERON:0001756
name: middle ear
alt_id: UBERON:FMA_56513-MA_0000253-MIAA_0000146-XAO_0000191
def: "The middle ear is the air-filled cavity within the skull of vertebrates that lies between the outer ear and the inner ear. It is linked to the pharynx (and therefore to outside air) via the Eustachian tube and in mammals contains the three ear ossicles, which transmit auditory vibrations from the outer ear (via the tympanum) to the inner ear (via the oval window)[GO]." [GO:0042474, Wikipedia:Middle_ear]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Middle ear" EXACT []
synonym: "tympanic cavity" RELATED []
xref: EHDAA:5693 ! middle ear
xref: FMA:56513 ! Middle ear
xref: GAID:165 ! middle ear
xref: HOG:0000312 ! middle ear
xref: MA:0000253 ! middle ear
xref: MAT:0000146 ! middle ear
xref: MIAA:0000146 ! middle ear
xref: ncithesaurus:Middle_Ear
xref: NIF_GrossAnatomy:birnlex_1695 ! Middle ear
xref: OpenCyc:Mx4rvbw1j5wpEbGdrcN5Y29ycA
xref: XAO:0000191 ! middle ear
is_a: UBERON:0000477 ! anatomical cluster
relationship: part_of UBERON:0001690 ! ear
xref: BTO:0002099 ! middle ear

[Term]
id: UBERON:0001757
name: pinna
alt_id: UBERON:FMA_56580-MA_0000259
def: "Visible part of the ear that resides outside of the head. The purpose of the pinna is to collect sound. It does so by acting as a funnel, amplifying the sound and directing it to the ear canal. While reflecting from the pinna, sound also goes through a filtering process which adds directional information to the sound (see sound localization, head-related transfer function, pinna notch). The filtering effect of the human pinna preferentially selects sounds in the frequency range of human speech. In various species, the pinna can also signal mood and radiate heat." [Wikipedia:Pinna_(anatomy)]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Auricle" EXACT []
synonym: "auricle" EXACT []
synonym: "auricula" EXACT [Wikipedia:Auricula]
synonym: "Auricle of ear" EXACT []
synonym: "auricle of ear" EXACT []
synonym: "Auricle of external ear" EXACT []
synonym: "auricle of external ear" EXACT []
synonym: "Auricula (Auris externa)" EXACT []
synonym: "auricula (auris externa)" EXACT []
synonym: "Pinna" EXACT []
synonym: "Pinna of ear" EXACT []
synonym: "pinna of ear" EXACT []
xref: FMA:56580 ! Pinna
xref: galen:Auricle
xref: HOG:0000460 ! pinna
xref: MA:0000259 ! auricle
is_a: UBERON:0001444 ! subdivision of head
relationship: part_of UBERON:0001691 ! external ear
xref: ncithesaurus:Auricle ! Auricle

[Term]
id: UBERON:0001758
name: periodontium
alt_id: UBERON:FMA_56665-MA_0002467
def: "Skeletal ligament (organ) that connects a tooth to the maxilla or mandible." [Wikipedia:Periodontium]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Periodontal ligament" EXACT []
synonym: "periodontal ligament" EXACT []
synonym: "Periodontal membrane" EXACT []
synonym: "periodontal membrane" RELATED []
synonym: "Periodontium" EXACT []
xref: BTO:0001020
xref: BTO:0001021
xref: FMA:56665 ! Periodontium
xref: GAID:1259 ! periodontal ligament
xref: GAID:216 ! periodontium
xref: MA:0002467 ! periodontal ligament
is_a: UBERON:0000211 ! ligament
relationship: part_of UBERON:0001091 ! tooth
xref: ncithesaurus:Periodontium ! Periodontium

[Term]
id: UBERON:0001759
name: vagus nerve
alt_id: UBERON:FMA_5731-MA_0001106-XAO_0003097-ZFA_0000453
def: "Cranial nerve that branches into the lateral (to body sense organs) and the intestino-accessorial (to the skin, muscles of shoulder, hyoid, larynx, gut, lungs, and heart)." [ISBN:0471209627, Wikipedia:Vagus_nerve]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "CN-X" RELATED []
synonym: "cranial nerve X" RELATED []
synonym: "Tenth cranial nerve" EXACT []
synonym: "tenth cranial nerve" EXACT []
synonym: "vagal nerve" RELATED []
synonym: "Vagus" EXACT []
synonym: "vagus" EXACT []
synonym: "Vagus nerve" EXACT []
synonym: "Vagus nerve [X]" EXACT []
synonym: "vagus nerve [x]" EXACT []
synonym: "Vagus nerve tree" EXACT []
synonym: "vagus nerve tree" EXACT []
synonym: "vagus X nerve" EXACT []
synonym: "vagus x nerve" EXACT []
xref: FMA:5731 ! Vagus nerve
xref: GAID:721 ! vagus nerve
xref: HOG:0000737 ! vagus nerve
xref: MA:0001106 ! vagus X nerve
xref: NIF_GrossAnatomy:birnlex_801 ! Vagus nerve
xref: TAO:0000453 ! cranial nerve X
xref: XAO:0003097 ! cranial nerve X
xref: ZFA:0000453 ! cranial nerve X
is_a: UBERON:0001785 ! cranial nerve
relationship: part_of UBERON:0001033 ! gustatory system
xref: ncithesaurus:Vagus_Nerve ! Vagus Nerve
xref: BTO:0003472 ! vagus nerve

[Term]
id: UBERON:0001760
name: frontal sinus
alt_id: UBERON:FMA_57417-MA_0001793
def: "." [Wikipedia:Frontal_sinus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Frontal sinus" EXACT []
xref: FMA:57417 ! Frontal sinus
xref: GAID:357 ! frontal sinus
xref: MA:0001793 ! frontal sinus
xref: ncithesaurus:Frontal_Sinus
is_a: UBERON:0001825 ! paranasal sinus

[Term]
id: UBERON:0001761
name: foramen caecum
alt_id: UBERON:FMA_57443-MA_0000725
def: "." [Wikipedia:Foramen_caecum]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Foramen caecum" EXACT []
xref: EHDAA:2150 ! foramen caecum
xref: EHDAA:2977 ! foramen caecum
xref: FMA:57443 ! Foramen caecum
xref: HOG:0000826 ! foramen caecum
xref: MA:0000725 ! foramen caecum
is_a: UBERON:0000464 ! anatomical space

[Term]
id: UBERON:0001762
name: nasal concha
alt_id: UBERON:FMA_57456-MA_0000286
def: "." [Wikipedia:Nasal_concha]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Nasal concha" EXACT []
synonym: "Nasal concha of ethmoid bone" EXACT []
synonym: "nasal concha of ethmoid bone" EXACT []
synonym: "Nasal turbinate" EXACT []
synonym: "nasal turbinate" EXACT []
synonym: "Turbinate" EXACT []
synonym: "turbinate" EXACT []
xref: FMA:57456 ! Nasal concha
xref: GAID:224 ! turbinate
xref: MA:0000286 ! nasal turbinate
xref: OpenCyc:Mx4rv07bVJwpEbGdrcN5Y29ycA
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0002204 ! musculoskeletal system
xref: ncithesaurus:Nasal_Turbinate ! Nasal Turbinate

[Term]
id: UBERON:0001763
name: dental papilla
alt_id: UBERON:FMA_57662-MA_0001598-ZFA_0005140
def: "Tissue of the developing tooth. It is composed of pre-odontoblast and undiffentiated mesnchyme cells and connects to the basal lamina." [Wikipedia:Dental_papilla, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Dental papilla" EXACT []
synonym: "pharyngeal tooth mesenchyme" RELATED []
synonym: "tooth mesenchyme" RELATED []
xref: FMA:57662 ! Dental papilla
xref: GAID:1277 ! dental papilla
xref: MA:0001598 ! dental papilla
xref: TAO:0005140 ! dental papilla
xref: ZFA:0005140 ! dental papilla
is_a: UBERON:0000479 ! portion of tissue
relationship: develops_from UBERON:0003104 ! mesenchyme
relationship: part_of UBERON:0001091 ! tooth
relationship: part_of UBERON:0001828 ! gingiva
xref: BTO:0001839 ! dental papilla

[Term]
id: UBERON:0001764
name: maxillary sinus
alt_id: UBERON:FMA_57715-MA_0001794
def: "." [Wikipedia:Maxillary_sinus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Antrum of Highmore" EXACT []
synonym: "antrum of highmore" EXACT []
synonym: "Maxillary sinus" EXACT []
xref: FMA:57715 ! Maxillary sinus
xref: GAID:358 ! maxillary sinus
xref: MA:0001794 ! maxillary sinus
xref: ncithesaurus:Maxillary_Sinus
is_a: UBERON:0001825 ! paranasal sinus

[Term]
id: UBERON:0001765
name: lactiferous duct
alt_id: UBERON:FMA_58006-MA_0000791
def: "Ppithelial tube that transports milk[GO]." [GO:0060603, Wikipedia:Lactiferous_duct]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "mammary duct" EXACT [GO:0060603]
synonym: "mammary gland duct" EXACT []
xref: FMA:58006 ! Lactiferous duct
xref: MA:0000791 ! mammary gland duct
is_a: UBERON:0000058 ! duct
relationship: part_of UBERON:0001911 ! lactiferous gland
xref: ncithesaurus:Lactiferous_Duct ! Lactiferous Duct
xref: BTO:0002845 ! mammary duct

[Term]
id: UBERON:0001766
name: anterior chamber of eyeball
alt_id: UBERON:FMA_58078-MA_0000262
comment: This class was created automatically from a combination of ontologies
synonym: "Anterior chamber of eye" EXACT []
synonym: "anterior chamber of eye" EXACT []
synonym: "Anterior chamber of eyeball" EXACT []
synonym: "Camera anterior" EXACT []
synonym: "camera anterior" EXACT []
synonym: "eye anterior chamber" EXACT []
xref: FMA:58078 ! Anterior chamber of eyeball
xref: HOG:0001431 ! eye anterior chamber
xref: MA:0000262 ! eye anterior chamber
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001801 ! anterior segment of eyeball

[Term]
id: UBERON:0001767
name: posterior chamber of eyeball
alt_id: UBERON:FMA_58080-MA_0002460
comment: This class was created automatically from a combination of ontologies
synonym: "Camera posterior" EXACT []
synonym: "camera posterior" EXACT []
synonym: "eye posterior chamber" EXACT []
synonym: "Posterior chamber of eye" EXACT []
synonym: "posterior chamber of eye" EXACT []
synonym: "Posterior chamber of eyeball" EXACT []
xref: FMA:58080 ! Posterior chamber of eyeball
xref: MA:0002460 ! eye posterior chamber
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001801 ! anterior segment of eyeball

[Term]
id: UBERON:0001768
name: vascular layer of eyeball
alt_id: UBERON:FMA_58103-MA_0002480
def: "." [Wikipedia:Uvea]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Tunica vasculosa of eyeball" EXACT []
synonym: "tunica vasculosa of eyeball" EXACT []
synonym: "Uvea" EXACT []
synonym: "uvea" EXACT []
synonym: "Uveal tract" EXACT []
synonym: "uveal tract" EXACT []
synonym: "Vascular layer of eyeball" EXACT []
xref: FMA:58103 ! Vascular layer of eyeball
xref: GAID:912 ! uvea
xref: MA:0002480 ! uvea
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001801 ! anterior segment of eyeball
xref: ncithesaurus:Uvea ! Uvea

[Term]
id: UBERON:0001769
name: iris
alt_id: UBERON:FMA_58235-MA_0000273-XAO_0000185-ZFA_0001238
def: "a membrane in the eye, responsible for controlling the amount of light reaching the retina. The iris consists of pigmented fibrovascular tissue known as a stroma. It is the most forward portion of the eye and the only one seen on superficial inspection. The stroma connects a sphincter muscle (sphincter pupillae), which contracts the pupil, and a set of dilator muscles (dilator pupillae) which open it. The back surface is covered by a heavily pigmented epithelial layer two cells thick (the iris pigment epithelium), but the front surface has no epithelium. The high pigment content blocks light from passing through the iris and restricts it to the pupil. The outer edge of the iris, known as the root, is attached to the sclera and the anterior ciliary body. The iris and ciliary body together are known as the anterior uvea. Just in front of the root of the iris is the region through which the aqueous humour constantly drains out of the eye, with the result that diseases of the iris often have important effects on intraocular pressure, and indirectly on vision. Depending on the amount of light, the iris makes the pupil larger or smaller." [Wikipedia:Iris_(anatomy)]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Iris" EXACT []
xref: BTO:0000653
xref: FMA:58235 ! Iris
xref: GAID:917 ! iris
xref: HOG:0000101 ! iris
xref: MA:0000273 ! iris
xref: OpenCyc:Mx4rvVjbppwpEbGdrcN5Y29ycA
xref: TAO:0001238 ! iris
xref: XAO:0000185 ! iris
xref: ZFA:0001238 ! iris
is_a: UBERON:0001768 ! vascular layer of eyeball
relationship: develops_from UBERON:0003072 ! eye vesicle
xref: ncithesaurus:Iris ! Iris

[Term]
id: UBERON:0001770
name: lacrimal canaliculus
alt_id: UBERON:FMA_58245-MA_0001294
def: "." [Wikipedia:Lacrimal_canaliculus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Lacrimal canaliculus" EXACT []
xref: FMA:58245 ! Lacrimal canaliculus
xref: MA:0001294 ! lacrimal canaliculus
is_a: UBERON:0000063 ! organ segment
relationship: part_of UBERON:0001850 ! lacrimal duct
xref: ncithesaurus:Lacrimal_Canaliculus ! Lacrimal Canaliculus

[Term]
id: UBERON:0001771
name: pupil
alt_id: UBERON:FMA_58252-MA_0001292-XAO_0000283-ZFA_0001283
def: "sphere that is located in the center of the iris of the eye and that controls the amount of light that enters the eye." [Wikipedia:Pupil]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Pupil" EXACT []
xref: FMA:58252 ! Pupil
xref: GAID:918 ! pupil
xref: HOG:0000116 ! pupil
xref: MA:0001292 ! pupil
xref: OpenCyc:Mx4rvViBr5wpEbGdrcN5Y29ycA
xref: TAO:0001283 ! pupil
xref: XAO:0000283 ! pupil
xref: ZFA:0001283 ! pupil
is_a: UBERON:0000464 ! anatomical space
relationship: part_of UBERON:0001769 ! iris
xref: ncithesaurus:Pupil ! Pupil

[Term]
id: UBERON:0001772
name: corneal epithelium
alt_id: UBERON:FMA_58263-MA_0001243
def: "." [Wikipedia:Corneal_epithelium]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Anterior corneal epithelium" EXACT []
synonym: "anterior corneal epithelium" EXACT []
synonym: "Corneal epithelium" EXACT []
synonym: "Epithelium anterius (Cornea)" EXACT []
synonym: "epithelium anterius (cornea)" EXACT []
synonym: "Epithelium of cornea" EXACT []
synonym: "epithelium of cornea" EXACT []
synonym: "External epithelium of cornea" EXACT []
synonym: "external epithelium of cornea" EXACT []
xref: BTO:0000287
xref: FMA:58263 ! Corneal epithelium
xref: GAID:895 ! corneal epithelium
xref: MA:0001243 ! corneal epithelium
xref: ZFA:0001683 ! corneal epithelium
is_a: UBERON:0000488 ! atypical epithelium
intersection_of: UBERON:0000483 ! epithelium
intersection_of: part_of UBERON:0000964 ! cornea
relationship: part_of UBERON:0000964 ! cornea
xref: ncithesaurus:Corneal_Epithelium ! Corneal Epithelium

[Term]
id: UBERON:0001773
name: sclera
alt_id: UBERON:FMA_58269-MA_0000280-XAO_0000183
def: "." [Wikipedia:Sclera]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Sclera" EXACT []
xref: FMA:58269 ! Sclera
xref: GAID:911 ! sclera
xref: HOG:0001274 ! sclera
xref: MA:0000280 ! sclera
xref: OpenCyc:Mx4rv7yR55wpEbGdrcN5Y29ycA
xref: XAO:0000183 ! sclera
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0000970 ! eye
xref: ncithesaurus:Sclera ! Sclera
xref: BTO:0001606 ! sclera

[Term]
id: UBERON:0001774
name: muscle of trunk
alt_id: UBERON:FMA_58274-MA_0000514
def: "Muscle organ which is a part of the trunk. Examples: external intercostal muscle, external oblique, levator ani." []
comment: TODO - check muscle organ vs musculature
subset: uberon_slim
synonym: "Muscle of trunk" EXACT []
synonym: "Trunk muscle" EXACT []
synonym: "trunk muscle" EXACT []
synonym: "trunk musculature" EXACT []
xref: XAO:0003230 ! trunk musculature
xref: ZFA:0000473 ! trunk musculature
xref: AAO:0000611 ! trunk_muscles
xref: FMA:58274 ! Muscle of trunk
xref: MA:0000514 ! trunk muscle
is_a: UBERON:0001630 ! muscle organ
intersection_of: UBERON:0001630 ! muscle organ
intersection_of: part_of UBERON:0002100 ! trunk

[Term]
id: UBERON:0001775
name: ciliary body
alt_id: UBERON:FMA_58295-MA_0000264-XAO_0000186-ZFA_0001203
def: "." [Wikipedia:Ciliary_body]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Ciliary body" EXACT []
xref: BTO:0000260
xref: FMA:58295 ! Ciliary body
xref: GAID:916 ! ciliary body
xref: HOG:0000102 ! ciliary body
xref: MA:0000264 ! ciliary body
xref: ncithesaurus:Ciliary_Body
xref: TAO:0001203 ! ciliary body
xref: XAO:0000186 ! ciliary body
xref: ZFA:0001203 ! ciliary body
is_a: UBERON:0001768 ! vascular layer of eyeball
relationship: part_of UBERON:0001768 ! vascular layer of eyeball

[Term]
id: UBERON:0001776
name: choroid
alt_id: UBERON:FMA_58298-MA_0000263
def: "." [Wikipedia:Choroid]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Choroid" EXACT []
xref: FMA:58298 ! Choroid
xref: GAID:913 ! choroid
xref: MA:0000263 ! choroid
xref: ncithesaurus:Choroid
is_a: UBERON:0001768 ! vascular layer of eyeball
relationship: part_of UBERON:0001768 ! vascular layer of eyeball
xref: ZFA:0005229 ! choroid
xref: BTO:0001829 ! choroid

[Term]
id: UBERON:0001777
name: substantia propria of cornea
alt_id: UBERON:FMA_58306-MA_0001245
def: "." [Wikipedia:Corneal_stroma]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "corneal stroma" EXACT []
synonym: "Stroma of cornea" EXACT []
synonym: "stroma of cornea" EXACT []
synonym: "substantia propria" RELATED []
synonym: "Substantia propria of cornea" EXACT []
xref: FMA:58306 ! Substantia propria of cornea
xref: GAID:893 ! corneal stroma
xref: MA:0001245 ! corneal stroma
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0000964 ! cornea
xref: ZFA:0001685 ! corneal stroma
xref: ncithesaurus:Corneal_Stroma ! Corneal Stroma

[Term]
id: UBERON:0001778
name: epithelium of ciliary body
alt_id: UBERON:FMA_58464-MA_0001238
comment: This class was created automatically from a combination of ontologies
synonym: "Ciliary body epithelium" EXACT []
synonym: "ciliary body epithelium" EXACT []
synonym: "Ciliary epithelium" EXACT []
synonym: "ciliary epithelium" EXACT []
synonym: "Epithelium of ciliary body" EXACT []
xref: FMA:58464 ! Epithelium of ciliary body
xref: MA:0001238 ! ciliary epithelium
is_a: UBERON:0000488 ! atypical epithelium
intersection_of: UBERON:0000483 ! epithelium
intersection_of: part_of UBERON:0001775 ! ciliary body
relationship: part_of UBERON:0001775 ! ciliary body
xref: ncithesaurus:Ciliary_Epithelium ! Ciliary Epithelium
xref: BTO:0001770 ! ciliary epithelium

[Term]
id: UBERON:0001779
name: iris stroma
alt_id: UBERON:FMA_58526-MA_0002777
def: "the delicate vascular connective tissue that lies between the anterior surface of the iris and the pars iridica retinae." [http://www.drugs.com/dict/stroma-of-iris.html, Wikipedia:Iris_stroma]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "iridial stroma" EXACT []
synonym: "stroma of iris" EXACT []
xref: FMA:58526 ! Stroma of iris
xref: MA:0002777 ! iris stroma
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001769 ! iris

[Term]
id: UBERON:0001780
name: spinal nerve
alt_id: UBERON:FMA_5858-MA_0000233-XAO_0003101
def: "Neural tree (organ) which is directly continuous with the spinal cord. Examples: Fifth cervical spinal nerve, third lumbar spinal nerve." [Wikipedia:Spinal_nerve]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Spinal nerve" EXACT []
synonym: "Spinal nerve tree" EXACT []
synonym: "spinal nerve tree" EXACT []
xref: BTO:0000870
xref: FMA:5858 ! Spinal nerve
xref: GAID:841 ! spinal nerve
xref: HOG:0000824 ! spinal nerve
xref: MA:0000233 ! spinal nerve
xref: XAO:0003101 ! spinal nerve
is_a: UBERON:0001021 ! nerve
intersection_of: UBERON:0001021 ! nerve
intersection_of: part_of UBERON:0001130 ! vertebral column
xref: ncithesaurus:Spinal_Nerve ! Spinal Nerve

[Term]
id: UBERON:0001783
name: optic disc
alt_id: UBERON:FMA_58634-MA_0000278
def: "." [Wikipedia:Optic_disc]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Optic disc" EXACT []
xref: EHDAA:9077 ! optic disc
xref: FMA:58634 ! Optic disc
xref: HOG:0000551 ! optic disc
xref: MA:0000278 ! optic disc
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0000966 ! retina
xref: ncithesaurus:Optic_Disc ! Optic Disc

[Term]
id: UBERON:0001784
name: macula lutea
alt_id: UBERON:FMA_58637-MA_0001306-ZFA_0000386
comment: Obsoleted as it accidentally grouped macula and macula lutea
is_obsolete: true
consider: UBERON:0000053
consider: UBERON:0000054

[Term]
id: UBERON:0001785
name: cranial nerve
alt_id: UBERON:FMA_5865-MA_0000215-XAO_0003089-ZFA_0000641
def: "Neural tree organ which is continuous with the brain. Examples: Trochlear nerve, facial nerve[FMA]. // Any of the major paired nerves of the head region. // Twelve pairs of cranial nerves exit/enter the cranium through openings in the skull. The nerves contain efferent axons with motor and glandular functions, as well as afferent axons from cranial ganglia with sensory functions. The nerves are numbered in a rostral to caudal sequence, with the exception of the lateral line nerves." [Wikipedia:Cranial_nerve, XB:curator, ZFIN:curator]
comment: note not classified as nerve in FMA
subset: uberon_slim
synonym: "Cranial nerve" EXACT []
synonym: "cranial nerves" RELATED []
synonym: "Cranial neural tree organ" EXACT []
synonym: "cranial neural tree organ" EXACT []
xref: AAO:0000108 ! cranial_nerves
xref: BTO:0001104
xref: FMA:5865 ! Cranial nerve
xref: GAID:802 ! cranial nerve
xref: HOG:0000279 ! cranial nerve
xref: MA:0000215 ! cranial nerve
xref: NIF_GrossAnatomy:birnlex_1623 ! Cranial nerve
xref: OpenCyc:Mx4rvWvJVpwpEbGdrcN5Y29ycA
xref: TAO:0000641 ! cranial nerve
xref: XAO:0003089 ! cranial nerve
xref: ZFA:0000641 ! cranial nerve
xref: ncithesaurus:Cranial_Nerve ! Cranial Nerve
is_a: UBERON:0001021 ! nerve
relationship: continuous_with UBERON:0000955 ! brain
intersection_of: UBERON:0001021 ! nerve
intersection_of: continuous_with UBERON:0000955 ! brain

[Term]
id: UBERON:0001786
name: fovea centralis
alt_id: UBERON:FMA_58658-MA_0001307
def: "." [Wikipedia:Fovea_centralis]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "fovea" EXACT []
synonym: "Fovea centralis" EXACT []
xref: FMA:58658 ! Fovea centralis
xref: GAID:910 ! fovea centralis
xref: MA:0001307 ! fovea
xref: NIF_GrossAnatomy:birnlex_2543 ! Fovea
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0000053 ! macula lutea
xref: ncithesaurus:Fovea_Centralis ! Fovea Centralis

[Term]
id: UBERON:0001781
name: layer of retina
alt_id: UBERON:FMA_58617-MA_0001319-XAO_0000266
comment: GO: the outer nuclear layer (ONL), which contains photoreceptor nuclei; the inner nuclear layer (INL), which contains amacrine, bipolar and horizontal cells; and the retinal ganglion cell (RGC) layer. Between the inner and outer nuclear layers, the outer plexiform layer (OPL) contains connections between the photoreceptors and bipolar and horizontal cells. The inner plexiform layer (IPL) is positioned between the INL and the ganglion cell layer and contains the dendrites of RGCs and processes of bipolar and amacrine cells. Spanning all layers of the retina are the radially oriented Mueller glia.
synonym: "Layer of retina" EXACT []
synonym: "Retina layer" EXACT []
synonym: "retina layer" EXACT []
synonym: "retinal layer" EXACT []
xref: FMA:58617 ! Layer of retina
xref: MA:0001319 ! retina layer
xref: XAO:0000266 ! retinal layer
is_a: UBERON:0000119 ! cell layer
relationship: part_of UBERON:0000966 ! retina
xref: ncithesaurus:Retina_Layer ! Retina Layer

[Term]
id: UBERON:0001782
name: pigmented layer of retina
alt_id: UBERON:FMA_58627-MA_0000279-ZFA_0000144
def: "A monolayer of pigmented epithelium covering the neural retina; develops from the outer of the two layers of the optic cup. <a href='http://zfin.org/cgi-bin/ZFIN_jump?record=ZDB-PUB-961014-576'>Kimmel et al, 1995.</a>" [Wikipedia:Retinal_pigment_epithelium, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Outer pigmented layer of retina" EXACT []
synonym: "outer pigmented layer of retina" EXACT []
synonym: "Pigment epithelium of retina" EXACT []
synonym: "pigment epithelium of retina" EXACT []
synonym: "pigmented epithelium" RELATED []
synonym: "Pigmented layer of retina" EXACT []
synonym: "pigmented retinal epithelium" EXACT []
synonym: "PRE" RELATED []
synonym: "Retinal pigment epithelium" EXACT []
synonym: "retinal pigment epithelium" EXACT []
synonym: "retinal pigmented epithelium" EXACT []
synonym: "RPE" RELATED []
synonym: "Stratum pigmentosum (Retina)" EXACT []
synonym: "stratum pigmentosum (retina)" EXACT []
xref: BTO:0001177
xref: EHDAA:4765 ! pigmented retinal epithelium
xref: FMA:58627 ! Pigmented layer of retina
xref: HOG:0000536 ! pigmented retinal epithelium
xref: MA:0000279 ! pigmented retinal epithelium
xref: TAO:0000144 ! retinal pigmented epithelium
xref: ZFA:0000144 ! retinal pigmented epithelium
is_a: UBERON:0001781 ! layer of retina
relationship: part_of UBERON:0003902 ! retinal neural layer
xref: ncithesaurus:Retinal_Pigment_Epithelium ! Retinal Pigment Epithelium

[Term]
id: UBERON:0003902 ! retinal neural layer
name: retinal neural layer
def: "The layer of nerve cells in the retina[XAO]. The part of the retina that contains neurons and photoreceptor cells[GO]." [XAO:0003216, GO:0003407]
synonym: "neural retina" EXACT [XAO:0003216, ZFA:0000046]
synonym: "neuroretina" EXACT [ZFA:0000046]
intersection_of: UBERON:0001781 ! layer of retina
intersection_of: has_part CL:0000540 ! neuron
xref: XAO:0003216 ! retinal neural layer
xref: ZFA:0000046 ! retinal neural layer

[Term]
id: UBERON:0001787
name: photoreceptor layer of retina
alt_id: UBERON:FMA_58680-MA_0001308
def: "The layer within the retina where the photoreceptor cell receptor segments reside." [ZFA:0000143, Wikipedia:Layer_of_rods_and_cones]
subset: uberon_slim
synonym: "Layer of rods and cones" EXACT []
synonym: "layer of rods and cones" RELATED []
synonym: "Photoreceptor layer of retina" EXACT []
synonym: "retina photoreceptor layer" EXACT []
synonym: "retinal neural layer" EXACT []
synonym: "neural retina" EXACT []
synonym: "Stratum segmentorum externorum et internorum (Retina)" EXACT []
synonym: "stratum segmentorum externorum et internorum (retina)" EXACT []
xref: FMA:58680 ! Photoreceptor layer of retina
xref: MA:0001308 ! retina photoreceptor layer
xref: XAO:0003215 ! photoreceptor layer
xref: ZFA:0000143 ! retinal photoreceptor layer
is_a: UBERON:0001781 ! layer of retina
relationship: part_of UBERON:0003902 ! retinal neural layer
intersection_of: UBERON:0001781 ! layer of retina
intersection_of: has_part CL:0000210 ! photoreceptor cell

[Term]
id: UBERON:0001788
name: outer limiting layer of retina
alt_id: UBERON:FMA_58683-MA_0001309
comment: This class was created automatically from a combination of ontologies
synonym: "External limiting lamina of retina" EXACT []
synonym: "external limiting lamina of retina" EXACT []
synonym: "External limiting membrane of retina" EXACT []
synonym: "external limiting membrane of retina" EXACT []
synonym: "Outer limiting layer of retina" EXACT []
synonym: "Outer limiting membrane of retina" EXACT []
synonym: "outer limiting membrane of retina" EXACT []
synonym: "retina external limiting lamina" EXACT []
synonym: "Stratum limitans externum (Retina)" EXACT []
synonym: "stratum limitans externum (retina)" EXACT []
xref: FMA:58683 ! Outer limiting layer of retina
xref: MA:0001309 ! retina external limiting lamina
is_a: UBERON:0001781 ! layer of retina

[Term]
id: UBERON:0001789
name: outer nuclear layer of retina
def: "The layer within the retina where the photoreceptor cell bodies reside." [ZFA:0001464]
alt_id: UBERON:FMA_58684-MA_0001315
comment: This class was created automatically from a combination of ontologies
synonym: "ONL" NARROW []
synonym: "Outer nuclear layer of retina" EXACT []
synonym: "retina outer nuclear layer" EXACT []
synonym: "Stratum nucleare externum (Retina)" EXACT []
synonym: "stratum nucleare externum (retina)" EXACT []
synonym: "retinal outer nuclear layer" EXACT []
xref: FMA:58684 ! Outer nuclear layer of retina
xref: MA:0001315 ! retina outer nuclear layer
xref: ZFA:0001464 ! retinal outer nuclear layer
xref: XAO:0003219 ! retinal outer nuclear layer
is_a: UBERON:0001781 ! layer of retina

[Term]
id: UBERON:0001790
name: outer plexiform layer of retina
def: "The layer within the retina where the bipolar cells synapse with the photoreceptor cells[ZFA]. Between the inner and outer nuclear layers, the outer plexiform layer (OPL) contains connections between the photoreceptors and bipolar and horizontal cells[GO]." [ZFA:0001330]
alt_id: UBERON:FMA_58685-MA_0001316
comment: This class was created automatically from a combination of ontologies
synonym: "OPL" NARROW []
synonym: "Outer plexiform layer of retina" EXACT []
synonym: "retina outer plexiform layer" EXACT []
synonym: "Stratum plexiforme externum" EXACT []
synonym: "stratum plexiforme externum" EXACT []
xref: FMA:58685 ! Outer plexiform layer of retina
xref: MA:0001316 ! retina outer plexiform layer
xref: ZFA:0001330 ! retinal outer plexiform layer
xref: XAO:0003218 ! retinal outer plexiform layer
is_a: UBERON:0001781 ! layer of retina
relationship: part_of UBERON:0003902 ! retinal neural layer

[Term]
id: UBERON:0001791
name: inner nuclear layer of retina
def: "Layer of retina that contains amacrine, bipolar and horizontal cells." []
alt_id: UBERON:FMA_58686-MA_0001311
comment: This class was created automatically from a combination of ontologies
synonym: "INL" NARROW []
synonym: "Inner nuclear layer of retina" EXACT []
synonym: "retina inner nuclear layer" EXACT []
synonym: "Stratum nucleare internum" EXACT []
synonym: "stratum nucleare internum" EXACT []
synonym: "retinal inner nuclear layer" EXACT []
xref: FMA:58686 ! Inner nuclear layer of retina
xref: MA:0001311 ! retina inner nuclear layer
xref: XAO:0003221 ! retinal inner nuclear layer 
xref: ZFA:0000119 ! retinal inner nuclear layer
is_a: UBERON:0001781 ! layer of retina
relationship: part_of UBERON:0003902 ! retinal neural layer
relationship: has_part CL:0000748 ! retinal bipolar neuron
relationship: has_part CL:0000561
relationship: has_part CL:0000745

[Term]
id: UBERON:0001792
name: ganglionic layer of retina
alt_id: UBERON:FMA_58687-MA_0001310
def: "." [Wikipedia:Ganglion_cell_layer]
comment: Check exact synonyms in ZFA / XAO
subset: uberon_slim
synonym: "RGC layer" EXACT []
synonym: "Ganglion cell layer" EXACT []
synonym: "ganglion cell layer" EXACT []
synonym: "Ganglionic cell layer of retina" EXACT []
synonym: "ganglionic cell layer of retina" EXACT []
synonym: "Ganglionic layer of retina" EXACT []
synonym: "retina ganglion cell layer" EXACT []
synonym: "Stratum ganglionicum (Retina)" EXACT []
synonym: "stratum ganglionicum (retina)" EXACT []
xref: FMA:58687 ! Ganglionic layer of retina
xref: MA:0001310 ! retina ganglion cell layer
xref: ZFA:0000024 ! retinal ganglion cell layer
xref: ncithesaurus:Ganglion_Cell_Layer ! Ganglion Cell Layer
xref: BTO:0003398 ! ganglion cell layer
xref: XAO:0003223 ! retinal ganglion cell layer
is_a: UBERON:0001781 ! layer of retina
relationship: part_of UBERON:0003902 ! retinal neural layer

[Term]
id: UBERON:0001793
name: nerve fiber layer of retina
alt_id: UBERON:FMA_58688-MA_0001314
comment: This class was created automatically from a combination of ontologies
synonym: "Layer of nerve fibers of retina" EXACT []
synonym: "layer of nerve fibers of retina" EXACT []
synonym: "Layer of nerve fibres of retina" EXACT []
synonym: "layer of nerve fibres of retina" EXACT []
synonym: "Nerve fiber layer of retina" EXACT []
synonym: "retina nerve fiber layer" EXACT []
synonym: "Stratum neurofibrarum (Retina)" EXACT []
synonym: "stratum neurofibrarum (retina)" EXACT []
synonym: "Stratum opticum of retina" EXACT []
synonym: "stratum opticum of retina" EXACT []
xref: FMA:58688 ! Nerve fiber layer of retina
xref: HOG:0001169 ! retina nerve fiber layer
xref: MA:0001314 ! retina nerve fiber layer
is_a: UBERON:0001781 ! layer of retina
relationship: has_part UBERON:0001021 ! nerve
relationship: part_of UBERON:0003902 ! retinal neural layer

[Term]
id: UBERON:0001794
name: inner limiting layer of retina
alt_id: UBERON:FMA_58689-MA_0001313
comment: This class was created automatically from a combination of ontologies
synonym: "Inner limiting layer of retina" EXACT []
synonym: "Inner limiting membrane of retina" EXACT []
synonym: "inner limiting membrane of retina" EXACT []
synonym: "Internal limiting lamina of retina" EXACT []
synonym: "internal limiting lamina of retina" EXACT []
synonym: "Internal limiting membrane of retina" EXACT []
synonym: "internal limiting membrane of retina" EXACT []
synonym: "retina internal limiting lamina" EXACT []
xref: FMA:58689 ! Inner limiting layer of retina
xref: MA:0001313 ! retina internal limiting lamina
is_a: UBERON:0001781 ! layer of retina

[Term]
id: UBERON:0001795
name: inner plexiform layer of retina
def: "The inner plexiform layer (IPL) is positioned between the INL and the ganglion cell layer and contains the dendrites of RGCs and processes of bipolar and amacrine cells[GO]." []
alt_id: UBERON:FMA_58704-MA_0001312
comment: This class was created automatically from a combination of ontologies
synonym: "IPL" NARROW []
synonym: "Inner plexiform layer of retina" EXACT []
synonym: "retina inner plexiform layer" EXACT []
synonym: "Stratum plexiforme internum" EXACT []
synonym: "stratum plexiforme internum" EXACT []
xref: FMA:58704 ! Inner plexiform layer of retina
xref: MA:0001312 ! retina inner plexiform layer
xref: XAO:0003225 ! retinal inner plexiform layer 
xref: ZFA:0001329  ! retinal inner plexiform layer
is_a: UBERON:0001781 ! layer of retina
relationship: adjacent_to UBERON:0001791 ! INL
relationship: adjacent_to UBERON:0001792 ! RGC layer
relationship: overlaps CL:0000740 ! retinal ganglion cell 
relationship: overlaps CL:0000748 ! retinal bipolar neuron
intersection_of: UBERON:0001781 ! layer of retina
intersection_of: adjacent_to UBERON:0001791 ! INLr
intersection_of: adjacent_to UBERON:0001792 ! RGC layer
relationship: part_of UBERON:0003902 ! retinal neural layer

[Term]
id: UBERON:0001796
name: aqueous humor of eyeball
alt_id: UBERON:FMA_58819-MA_0001236
def: "Body substance in liquid state contained in the anterior and posterior chambers of the eyeball." [Wikipedia:Aqueous_humor]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Aqueous humor" EXACT []
synonym: "aqueous humor" EXACT []
synonym: "Aqueous humor of eyeball" EXACT []
synonym: "aqueous humour" EXACT []
xref: EHDAA:10196 ! aqueous humour
xref: ENVO:02000024
xref: FMA:58819 ! Aqueous humor of eyeball
xref: GAID:890 ! aqueous humor
xref: HOG:0000548 ! aqueous humour
xref: MA:0001236 ! aqueous humour
xref: OpenCyc:Mx4rvdGd-5wpEbGdrcN5Y29ycA
is_a: UBERON:0000463 ! portion of organism substance
relationship: part_of UBERON:0001766 ! anterior chamber of eyeball
xref: ncithesaurus:Aqueous_Humor ! Aqueous Humor

[Term]
id: UBERON:0001797
name: vitreous humor
alt_id: UBERON:FMA_58822-MA_0001286
def: "Body substance of semisolid state which constitutes the vitreous body of the eye." [Wikipedia:Vitreous_humor]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Humor vitreous" EXACT []
synonym: "humor vitreous" EXACT []
synonym: "Vitreous humor" EXACT []
synonym: "vitreous humour" RELATED []
xref: ENVO:02000032
xref: FMA:58822 ! Whole portion of vitreous humor
xref: MA:0001286 ! vitreous humor
xref: OpenCyc:Mx4rv7ZIfZwpEbGdrcN5Y29ycA
is_a: UBERON:0000463 ! portion of organism substance
relationship: part_of UBERON:0001798 ! vitreous body
xref: ncithesaurus:Vitreous_Humor ! Vitreous Humor
xref: BTO:0001451 ! vitreous humor

[Term]
id: UBERON:0001798
name: vitreous body
alt_id: UBERON:FMA_58827-MA_0002462
def: "Mucoid tissue in the vitreous chamber of the eyeball. Examples: There are only two instances, right and left vitreous bodies." [Wikipedia:Vitreous_body]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Vitreous body" EXACT []
xref: ENVO:02000032
xref: FMA:58827 ! Vitreous body
xref: GAID:919 ! vitreous body
xref: MA:0002462 ! vitreous body
is_a: UBERON:0002384 ! connective tissue
relationship: part_of UBERON:0001799 ! vitreous chamber of eyeball
xref: ncithesaurus:Vitreous_Body ! Vitreous Body

[Term]
id: UBERON:0001799
name: vitreous chamber of eyeball
alt_id: UBERON:FMA_58848-MA_0002461
def: "." [Wikipedia:Vitreous_chamber]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Camera postrema" EXACT []
synonym: "camera postrema" EXACT []
synonym: "Camera vitrea" EXACT []
synonym: "camera vitrea" EXACT []
synonym: "Camera vitrea bulbi" EXACT []
synonym: "camera vitrea bulbi" EXACT []
synonym: "Postremal chamber" EXACT []
synonym: "postremal chamber" EXACT []
synonym: "Postremal chamber of eyeball" EXACT []
synonym: "postremal chamber of eyeball" EXACT []
synonym: "Vitreous chamber" EXACT []
synonym: "vitreous chamber" EXACT []
synonym: "Vitreous chamber of eyeball" EXACT []
xref: FMA:58848 ! Vitreous chamber of eyeball
xref: MA:0002461 ! vitreous chamber
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001802 ! posterior segment of eyeball
xref: ncithesaurus:Vitreous_Chamber ! Vitreous Chamber

[Term]
id: UBERON:0001800
name: sensory ganglion
alt_id: UBERON:FMA_5885-MA_0002566
comment: This class was created automatically from a combination of ontologies
synonym: "Ganglion sensorium" EXACT []
synonym: "ganglion sensorium" EXACT []
synonym: "Sensory ganglion" EXACT []
xref: FMA:5885 ! Sensory ganglion
xref: MA:0002566 ! sensory ganglion
is_a: UBERON:0000045 ! ganglion
xref: ncithesaurus:Sensory_Ganglion ! Sensory Ganglion

[Term]
id: UBERON:0001801
name: anterior segment of eyeball
alt_id: UBERON:FMA_58865-MA_0002484
comment: This class was created automatically from a combination of ontologies
synonym: "Anterior segment of eyeball" EXACT []
synonym: "eye anterior segment" EXACT []
synonym: "Segmentum anterius (Bulbus oculi)" EXACT []
synonym: "segmentum anterius (bulbus oculi)" EXACT []
xref: FMA:58865 ! Anterior segment of eyeball
xref: MA:0002484 ! eye anterior segment
is_a: UBERON:0000063 ! organ segment
relationship: part_of UBERON:0000970 ! eye

[Term]
id: UBERON:0001802
name: posterior segment of eyeball
alt_id: UBERON:FMA_58868-MA_0002485
comment: This class was created automatically from a combination of ontologies
synonym: "eye posterior segment" EXACT []
synonym: "Posterior segment of eyeball" EXACT []
synonym: "Segmentum posterius (Bulbus oculi)" EXACT []
synonym: "segmentum posterius (bulbus oculi)" EXACT []
xref: FMA:58868 ! Posterior segment of eyeball
xref: MA:0002485 ! eye posterior segment
is_a: UBERON:0000063 ! organ segment
relationship: part_of UBERON:0000970 ! eye

[Term]
id: UBERON:0001803
name: epithelium of lens
alt_id: UBERON:FMA_58871-MA_0001301-ZFA_0001326
def: "The cells of the lens epithelium regulate most of the homeostatic functions of the lens.[6] As ions, nutrients, and liquid enter the lens from the aqueous humor, Na+/K+ ATPase pumps in the lens epithelial cells pump ions out of the lens to maintain appropriate lens osmolarity and volume, with equatorially positioned lens epithelium cells contributing most to this current. The activity of the Na+/K+ ATPases keeps water and current flowing through the lens from the poles and exiting through the equatorial regions." [Wikipedia:Lens_(anatomy)#Lens_Epithelium]
comment: This class was created automatically from a combination of ontologies
synonym: "Epithelium of lens" EXACT []
synonym: "Lens epithelium" EXACT []
synonym: "lens epithelium" EXACT []
xref: FMA:58871 ! Epithelium of lens
xref: MA:0001301 ! lens epithelium
xref: TAO:0001326 ! lens epithelium
xref: ZFA:0001326 ! lens epithelium
is_a: UBERON:0000484 ! simple cuboidal epithelium
intersection_of: UBERON:0000483 ! epithelium
intersection_of: part_of UBERON:0000965 ! lens
relationship: part_of UBERON:0000965 ! lens
xref: BTO:0001873 ! lens epithelium

[Term]
id: UBERON:0001804
name: capsule of lens
alt_id: UBERON:FMA_58881-MA_0001300
def: "a smooth, transparent basement membrane that completely surrounds the lens. It is synthesized by the lens epithelium and its main components are Type IV collagen and sulfated glycosaminoglycans (GAGs)." [Wikipedia:Lens_capsule]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Capsule of lens" EXACT []
synonym: "Lens capsule" EXACT []
synonym: "lens capsule" EXACT []
xref: FMA:58881 ! Capsule of lens
xref: HOG:0000550 ! lens capsule
xref: MA:0001300 ! lens capsule
is_a: UBERON:0003893 ! capsule
relationship: part_of UBERON:0000965 ! lens
xref: ncithesaurus:Lens_Capsule ! Lens Capsule

[Term]
id: UBERON:0001805
name: autonomic ganglion
alt_id: UBERON:FMA_5889-MA_0000220
def: "ganglion that has dendrites that form a junction between autonomic nerves originating from the central nervous system and autonomic nerves innervating their target organs in the periphery. There are two subtypes, sympathetic ganglion and parasympathetic ganglion." [Wikipedia:Autonomic_ganglion]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Autonomic ganglion" EXACT []
xref: FMA:5889 ! Autonomic ganglion
xref: MA:0000220 ! autonomic ganglion
is_a: UBERON:0000045 ! ganglion
intersection_of: UBERON:0000045 ! ganglion
intersection_of: part_of UBERON:0002410 ! autonomic nervous system
relationship: part_of UBERON:0002410 ! autonomic nervous system
xref: ncithesaurus:Autonomic_Ganglion ! Autonomic Ganglion

[Term]
id: UBERON:0001806
name: sympathetic ganglion
alt_id: UBERON:FMA_5890-MA_0000226
def: "." [Wikipedia:Sympathetic_ganglion]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Ganglion sympatheticum" EXACT []
synonym: "ganglion sympatheticum" EXACT []
synonym: "Sympathetic ganglion" EXACT []
xref: BTO:0001333
xref: FMA:5890 ! Sympathetic ganglion
xref: MA:0000226 ! sympathetic ganglion
is_a: UBERON:0001805 ! autonomic ganglion
intersection_of: UBERON:0000045 ! ganglion
intersection_of: part_of UBERON:0000013 ! sympathetic nervous system
xref: ncithesaurus:Sympathetic_Ganglion ! Sympathetic Ganglion

[Term]
id: UBERON:0001807
name: paravertebral ganglion
alt_id: UBERON:FMA_5891-ZFA_0001556
def: "Trunk ganglion which is part of a bilaterally paired set of sympathetic ganglia located anterior and lateral to the spinal cord." [Wikipedia:Paravertebral_ganglion, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Ganglion of sympathetic trunk" EXACT []
synonym: "ganglion of sympathetic trunk" EXACT []
synonym: "Ganglion trunci sympathetici" EXACT []
synonym: "ganglion trunci sympathetici" EXACT []
synonym: "Paravertebral ganglion" EXACT []
synonym: "Sympathetic chain ganglion" EXACT []
synonym: "sympathetic chain ganglion" EXACT []
xref: FMA:5891 ! Paravertebral ganglion
xref: TAO:0001556 ! sympathetic chain ganglion
xref: ZFA:0001556 ! sympathetic chain ganglion
is_a: UBERON:0001806 ! sympathetic ganglion

[Term]
id: UBERON:0001808
name: parasympathetic ganglion
alt_id: UBERON:FMA_5894-MA_0002469
def: "." [Wikipedia:Parasympathetic_ganglion]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Parasympathetic ganglion" EXACT []
xref: BTO:0001256
xref: FMA:5894 ! Parasympathetic ganglion
xref: MA:0002469 ! parasympathetic ganglion
is_a: UBERON:0001805 ! autonomic ganglion
xref: ncithesaurus:Parasympathetic_Ganglion ! Parasympathetic Ganglion

[Term]
id: UBERON:0001809
name: enteric ganglion
alt_id: UBERON:FMA_5896-MA_0001144
comment: This class was created automatically from a combination of ontologies
synonym: "Enteric ganglion" EXACT []
synonym: "Intramural ganglion" EXACT []
synonym: "intramural ganglion" EXACT []
xref: FMA:5896 ! Enteric ganglion
xref: MA:0001144 ! enteric ganglion
is_a: UBERON:0001808 ! parasympathetic ganglion
relationship: part_of UBERON:0002005 ! enteric nervous system
xref: ncithesaurus:Enteric_Ganglion ! Enteric Ganglion

[Term]
id: UBERON:0001810
name: nerve plexus
alt_id: UBERON:FMA_5901-MA_0002407
def: "Anatomical junction where subdivisions of two or more neural trees interconnect with one another to form a network through which nerve fibers of the constituent nerve trees become regrouped; together with other nerve plexuses, nerves and ganglia, it constitutes the peripheral nervous system. Examples: cervical nerve plexus, brachial nerve plexus, sacral nerve plexus." [Wikipedia:Nerve_plexus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Nerve plexus" EXACT []
xref: BTO:0000205
xref: EHDAA:3780 ! nerve plexus
xref: FMA:5901 ! Nerve plexus
xref: MA:0002407 ! nerve plexus
is_a: UBERON:0000061 ! anatomical structure
relationship: part_of UBERON:0001016 ! nervous system
xref: ncithesaurus:Nerve_Plexus ! Nerve Plexus

[Term]
id: UBERON:0001811
name: conjunctiva
alt_id: UBERON:FMA_59011-XAO_0000182
def: "." [Wikipedia:Conjunctiva]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Conjunctiva" EXACT []
synonym: "Wall of conjunctival sac" EXACT []
synonym: "wall of conjunctival sac" EXACT []
xref: EFO:0000374 ! conjunctiva
xref: FMA:59011 ! Conjunctiva
xref: GAID:898 ! conjunctiva
xref: HAO:0000221 ! conjunctiva
xref: MA:0000265 ! conjunctiva
xref: ncithesaurus:Conjunctiva
xref: XAO:0000182 ! conjunctiva
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0000970 ! eye
xref: BTO:0003415 ! conjunctiva

[Term]
id: UBERON:0001812
name: palpebral conjunctiva
alt_id: UBERON:FMA_59025-MA_0001265
comment: This class was created automatically from a combination of ontologies
synonym: "Palpebral conjunctiva" EXACT []
synonym: "Tunica conjunctiva palpebrum" EXACT []
synonym: "tunica conjunctiva palpebrum" EXACT []
xref: FMA:59025 ! Palpebral conjunctiva
xref: MA:0001265 ! palpebral conjunctiva
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001711 ! eyelid
xref: ncithesaurus:Palpebral_Conjunctiva ! Palpebral Conjunctiva

[Term]
id: UBERON:0001813
name: somatic nerve plexus
alt_id: UBERON:FMA_5903-MA_0000235
comment: This class was created automatically from a combination of ontologies
synonym: "Plexus of spinal nerves" EXACT []
synonym: "plexus of spinal nerves" EXACT []
synonym: "Somatic nerve plexus" EXACT []
synonym: "Spinal nerve plexus" EXACT []
synonym: "spinal nerve plexus" EXACT []
xref: FMA:5903 ! Somatic nerve plexus
xref: HOG:0000925 ! spinal nerve plexus
xref: MA:0000235 ! spinal nerve plexus
is_a: UBERON:0001810 ! nerve plexus
xref: ncithesaurus:Spinal_Nerve_Plexus ! Spinal Nerve Plexus

[Term]
id: UBERON:0001814
name: brachial nerve plexus
alt_id: UBERON:FMA_5906-MA_0001180
def: "." [Wikipedia:Brachial_plexus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Brachial nerve plexus" EXACT []
synonym: "Brachial plexus" EXACT []
synonym: "brachial plexus" EXACT []
xref: EHDAA:3782 ! brachial plexus
xref: FMA:5906 ! Brachial nerve plexus
xref: GAID:842 ! brachial plexus
xref: HOG:0000372 ! brachial plexus
xref: MA:0001180 ! brachial plexus
is_a: UBERON:0001021 ! nerve
is_a: UBERON:0001813 ! somatic nerve plexus
relationship: part_of UBERON:0002102 ! forelimb
xref: ncithesaurus:Brachial_Plexus ! Brachial Plexus

[Term]
id: UBERON:0001815
name: lumbosacral nerve plexus
alt_id: UBERON:FMA_5907-MA_0001181
def: "." [Wikipedia:Lumbosacral_plexus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Lumbosacral nerve plexus" EXACT []
synonym: "Lumbosacral plexus" EXACT []
synonym: "lumbosacral plexus" EXACT []
xref: EHDAA:4673 ! lumbosacral plexus
xref: FMA:5907 ! Lumbosacral nerve plexus
xref: GAID:849 ! lumbosacral plexus
xref: MA:0001181 ! lumbosacral plexus
is_a: UBERON:0001813 ! somatic nerve plexus
xref: ncithesaurus:Lumbosacral_Plexus ! Lumbosacral Plexus

[Term]
id: UBERON:0001816
name: autonomic nerve plexus
alt_id: UBERON:FMA_5910-MA_0000221
comment: This class was created automatically from a combination of ontologies
synonym: "Autonomic nerve plexus" EXACT []
synonym: "Autonomic plexus" EXACT []
synonym: "autonomic plexus" EXACT []
synonym: "Visceral nerve plexus" EXACT []
synonym: "visceral nerve plexus" EXACT []
synonym: "Visceral plexus" EXACT []
synonym: "visceral plexus" EXACT []
xref: FMA:5910 ! Autonomic nerve plexus
xref: MA:0000221 ! autonomic nerve plexus
is_a: UBERON:0001810 ! nerve plexus
relationship: part_of UBERON:0002410 ! autonomic nervous system

[Term]
id: UBERON:0001817
name: lacrimal gland
alt_id: UBERON:FMA_59101-MA_0001296
def: "Lobular organ the parenchyma of which consists of glandular acini which communicate the lacrimal sac. Examples: There only two instances, right lacrimal and left lacrimal glands." [Wikipedia:Lacrimal_gland]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Lacrimal gland" EXACT []
xref: FMA:59101 ! Lacrimal gland
xref: HOG:0001476 ! lacrimal gland
xref: MA:0001296 ! lacrimal gland
xref: ncithesaurus:Lacrimal_Gland
is_a: UBERON:0002530 ! gland
relationship: part_of UBERON:0001750 ! lacrimal apparatus
relationship: part_of UBERON:0002330 ! exocrine system

[Term]
id: UBERON:0001818
name: tarsal gland
alt_id: UBERON:FMA_59104-MA_0001249
def: "." [Wikipedia:Tarsal_gland]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Gland of Meibom" EXACT []
synonym: "gland of meibom" EXACT []
synonym: "Meibomian gland" EXACT []
synonym: "meibomian gland" EXACT []
synonym: "palpebral gland" RELATED []
synonym: "Tarsal gland" EXACT []
xref: FMA:59104 ! Tarsal gland
xref: GAID:899 ! meibomian gland
xref: MA:0001249 ! meibomian gland
is_a: UBERON:0001821 ! sebaceous gland
relationship: part_of UBERON:0001711 ! eyelid
xref: ncithesaurus:Meibomian_Gland ! Meibomian Gland

[Term]
id: UBERON:0001819
name: palpebral fissure
alt_id: UBERON:FMA_59110-MA_0001266
def: "." [Wikipedia:Palpebral_fissure]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Palpebral fissure" EXACT []
xref: FMA:59110 ! Palpebral fissure
xref: MA:0001266 ! palpebral fissure
is_a: UBERON:0000464 ! anatomical space
relationship: part_of UBERON:0001711 ! eyelid

[Term]
id: UBERON:0001820
name: sweat gland
alt_id: UBERON:FMA_59152-MA_0000150
def: "." [Wikipedia:Sweat_gland]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Sweat gland" EXACT []
xref: BTO:0001331
xref: FMA:59152 ! Sweat gland
xref: GAID:943 ! sweat gland
xref: HOG:0001467 ! sweat gland
xref: MA:0000150 ! sweat gland
xref: OpenCyc:Mx4rvVjx15wpEbGdrcN5Y29ycA
is_a: UBERON:0002530 ! gland
intersection_of: UBERON:0002530 ! gland
intersection_of: secretes UBERON:0001089 ! sweat
relationship: part_of UBERON:0002097 ! skin
relationship: part_of UBERON:0002330 ! exocrine system
xref: ncithesaurus:Sweat_Gland ! Sweat Gland

[Term]
id: UBERON:0001821
name: sebaceous gland
alt_id: UBERON:FMA_59160-MA_0002565
def: "." [Wikipedia:Sebaceous_gland]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Sebaceous gland" EXACT []
xref: FMA:59160 ! Sebaceous gland
xref: GAID:900 ! sebaceous gland
xref: HOG:0001468 ! sebaceous gland
xref: MA:0002565 ! sebaceous gland
is_a: UBERON:0002530 ! gland
relationship: part_of UBERON:0002330 ! exocrine system
xref: ncithesaurus:Sebaceous_Gland ! Sebaceous Gland
xref: BTO:0001980 ! sebaceous gland

[Term]
id: UBERON:0001822
name: orbital septum
alt_id: UBERON:FMA_59328-MA_0001259
def: "a membranous sheet that acts as the anterior boundary of the orbit. It extends from the orbital rims to the eyelids[WP]." [Wikipedia:Orbital_septum]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Orbital septum" EXACT []
xref: FMA:59328 ! Orbital septum
xref: MA:0001259 ! orbital septum
is_a: UBERON:0003037 ! septum
relationship: part_of UBERON:0002204 ! musculoskeletal system

[Term]
id: UBERON:0001823
name: nasal cartilage
alt_id: UBERON:FMA_59502-MA_0001883
def: "." [Wikipedia:Nasal_cartilage]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Nasal cartilage" EXACT []
xref: FMA:59502 ! Nasal cartilage
xref: MA:0001883 ! nasal cartilage
is_a: UBERON:0002236 ! costal cartilage
xref: ncithesaurus:Nasal_Cartilage ! Nasal Cartilage

[Term]
id: UBERON:0001824
name: mucosa of larynx
alt_id: UBERON:FMA_59662-MA_0001766
comment: This class was created automatically from a combination of ontologies
synonym: "Laryngeal mucosa" EXACT []
synonym: "laryngeal mucosa" EXACT []
synonym: "larynx mucosa" EXACT []
synonym: "Mucosa of larynx" EXACT []
synonym: "Mucous membrane of larynx" EXACT []
synonym: "mucous membrane of larynx" EXACT []
xref: FMA:59662 ! Mucosa of larynx
xref: GAID:301 ! laryngeal mucosa
xref: MA:0001766 ! larynx mucosa
is_a: UBERON:0000064 ! organ part
intersection_of: UBERON:0000344 ! mucosa
intersection_of: OBO_REL:part_of UBERON:0001737 ! larynx
relationship: part_of UBERON:0001737 ! larynx
xref: ncithesaurus:Laryngeal_Mucosa ! Laryngeal Mucosa

[Term]
id: UBERON:0001825
name: paranasal sinus
alt_id: UBERON:FMA_59679-MA_0000431
def: "." [Wikipedia:Paranasal_sinus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Paranasal sinus" EXACT []
xref: FMA:59679 ! Paranasal sinus
xref: GAID:355 ! paranasal sinus
xref: MA:0000431 ! paranasal sinus
is_a: UBERON:0002553 ! anatomical cavity
relationship: part_of UBERON:0001004 ! respiratory system
xref: ncithesaurus:Paranasal_Sinus ! Paranasal Sinus

[Term]
id: UBERON:0001826
name: mucosa of nose
alt_id: UBERON:FMA_59684-MA_0001324
comment: This class was created automatically from a combination of ontologies
synonym: "Mucosa of nose" EXACT []
synonym: "Mucous membrane of nose" EXACT []
synonym: "mucous membrane of nose" EXACT []
synonym: "nasal cavity epithelium" EXACT []
synonym: "Nasal mucosa" EXACT []
synonym: "nasal mucosa" RELATED []
xref: BTO:0000912
xref: FMA:59684 ! Mucosa of nose
xref: GAID:302 ! nasal mucosa
xref: MA:0001324 ! nasal cavity epithelium
is_a: UBERON:0000064 ! organ part
intersection_of: UBERON:0000344 ! mucosa
intersection_of: part_of UBERON:0001707 ! nasal cavity
relationship: part_of UBERON:0001707 ! nasal cavity
xref: ncithesaurus:Nasal_Cavity_Epithelium ! Nasal Cavity Epithelium

[Term]
id: UBERON:0001827
name: tear
alt_id: UBERON:FMA_59756-MA_0002508
def: "Secretion produced by the lacrimal gland." [Wikipedia:Tear]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Tear" EXACT []
xref: ENVO:02000034
xref: FMA:59756 ! Tear
xref: GAID:1173 ! tear
xref: MA:0002508 ! tear
is_a: UBERON:0000463 ! portion of organism substance
xref: ncithesaurus:Tear ! Tear
xref: BTO:0001499 ! tear

[Term]
id: UBERON:0001828
name: gingiva
alt_id: UBERON:FMA_59762-MA_0000342
def: "." [Wikipedia:Gingiva]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Gingiva" EXACT []
synonym: "Gum" EXACT []
synonym: "gum" RELATED []
xref: BTO:0000519
xref: FMA:59762 ! Gingiva
xref: GAID:1257 ! gingiva
xref: galen:Gingiva
xref: HOG:0001269 ! gum
xref: MA:0000342 ! gingiva
xref: OpenCyc:Mx4rvViWnZwpEbGdrcN5Y29ycA
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0000166 ! oral opening
xref: ncithesaurus:Gingiva ! Gingiva

[Term]
id: UBERON:0001829
name: major salivary gland
alt_id: UBERON:FMA_59788-MA_0002478
comment: This class was created automatically from a combination of ontologies
synonym: "Major salivary gland" EXACT []
xref: FMA:59788 ! Major salivary gland
xref: MA:0002478 ! major salivary gland
is_a: UBERON:0001044 ! salivary gland
relationship: part_of UBERON:0002330 ! exocrine system
xref: ncithesaurus:Major_Salivary_Gland ! Major Salivary Gland

[Term]
id: UBERON:0001830
name: minor salivary gland
alt_id: UBERON:FMA_59789-MA_0002479
comment: This class was created automatically from a combination of ontologies
synonym: "Minor salivary gland" EXACT []
xref: FMA:59789 ! Minor salivary gland
xref: GAID:940 ! minor salivary gland
xref: MA:0002479 ! minor salivary gland
is_a: UBERON:0001044 ! salivary gland
relationship: part_of UBERON:0002330 ! exocrine system
xref: ncithesaurus:Minor_Salivary_Gland ! Minor Salivary Gland

[Term]
id: UBERON:0001831
name: parotid gland
alt_id: UBERON:FMA_59790-MA_0001585
def: "." [Wikipedia:Parotid_gland]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Parotid" EXACT []
synonym: "parotid" EXACT []
synonym: "Parotid gland" EXACT []
xref: BTO:0001004
xref: FMA:59790 ! Parotid gland
xref: GAID:938 ! parotid gland
xref: HOG:0000308 ! parotid gland
xref: MA:0001585 ! parotid gland
is_a: UBERON:0001829 ! major salivary gland
relationship: part_of UBERON:0001567 ! cheek
xref: ncithesaurus:Parotid_Gland ! Parotid Gland

[Term]
id: UBERON:0001832
name: sublingual gland
alt_id: UBERON:FMA_59791-MA_0001588
def: "." [Wikipedia:Sublingual_gland]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Ductus sublingualis" EXACT []
synonym: "ductus sublingualis" EXACT []
synonym: "Rivinus' gland" EXACT []
synonym: "rivinus' gland" EXACT []
synonym: "Sublingual gland" EXACT []
xref: BTO:0001315
xref: FMA:59791 ! Sublingual gland
xref: GAID:941 ! sublingual gland
xref: HOG:0000363 ! sublingual gland
xref: MA:0001588 ! sublingual gland
is_a: UBERON:0001829 ! major salivary gland

[Term]
id: UBERON:0001833
name: lip
alt_id: UBERON:FMA_59816-ZFA_0007006
def: "One of the two fleshy folds which surround the opening of the mouth. http://www.medterms.com/script/main/art.asp?articlekey=9458" [Wikipedia:Lip, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Lip" EXACT []
synonym: "lips" RELATED []
xref: FMA:59816 ! Lip
xref: GAID:76 ! lip
xref: HOG:0000677 ! lip
xref: MA:0000343 ! lip
xref: ncithesaurus:Lip
xref: OpenCyc:Mx4rvVi4U5wpEbGdrcN5Y29ycA
xref: TAO:0007006 ! lip
xref: ZFA:0007006 ! lip
is_a: UBERON:0003102 ! surface structure
relationship: surrounds UBERON:0000166 ! oral opening
xref: BTO:0001647 ! lip

[Term]
id: UBERON:0001834
name: upper lip
alt_id: UBERON:FMA_59817-MA_0000919
def: "." [Wikipedia:Upper_lip]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Upper lip" EXACT []
xref: FMA:59817 ! Upper lip
xref: MA:0000919 ! upper lip
xref: OpenCyc:Mx4rvWPv7pwpEbGdrcN5Y29ycA
is_a: UBERON:0001833 ! lip
xref: ZFA:0005226 ! upper lip

[Term]
id: UBERON:0001835
name: lower lip
alt_id: UBERON:FMA_59818-MA_0000921
def: "." [Wikipedia:Lower_lip]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Lower lip" EXACT []
xref: FMA:59818 ! Lower lip
xref: MA:0000921 ! lower lip
xref: OpenCyc:Mx4rv842UpwpEbGdrcN5Y29ycA
is_a: UBERON:0001833 ! lip
xref: ZFA:0005225 ! lower lip

[Term]
id: UBERON:0001836
name: saliva
alt_id: UBERON:FMA_59862-MA_0002507
def: "In humans, the saliva is a turbid and slightly viscous fluid, generally of an alkaline reaction, and is secreted by the parotid, submaxillary, and sublingual glands. In the mouth the saliva is mixed with the secretion from the buccal glands. In man and many animals, saliva is an important digestive fluid on account of the presence of the peculiar enzyme, ptyalin[GO]." [GO:0046541, Wikipedia:Saliva]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
xref: BTO:0001202
xref: ENVO:02000036
xref: FMA:59862 ! Saliva
xref: GAID:1167 ! saliva
xref: MA:0002507 ! saliva
xref: MAT:0000444 ! saliva
xref: OpenCyc:Mx4rvVjJ95wpEbGdrcN5Y29ycA
is_a: UBERON:0000463 ! portion of organism substance
xref: ncithesaurus:Saliva ! Saliva

[Term]
id: UBERON:0001837
name: duct of salivary gland
alt_id: UBERON:FMA_59908-MA_0001586
def: "." [Wikipedia:Salivary_duct]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Duct of salivary gland" EXACT []
synonym: "Salivary duct" EXACT []
synonym: "salivary duct" EXACT []
synonym: "Salivary gland duct" EXACT []
synonym: "salivary gland duct" EXACT []
xref: FMA:59908 ! Duct of salivary gland
xref: GAID:939 ! salivary duct
xref: MA:0001586 ! salivary duct
is_a: UBERON:0000058 ! duct
relationship: part_of UBERON:0001044 ! salivary gland

[Term]
id: UBERON:0001838
name: sublingual duct
alt_id: UBERON:FMA_59983-MA_0002699
def: "." [Wikipedia:Sublingual_duct]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Sublingual duct" EXACT []
xref: FMA:59983 ! Sublingual duct
xref: MA:0002699 ! sublingual duct
is_a: UBERON:0001837 ! duct of salivary gland
relationship: part_of UBERON:0001832 ! sublingual gland

[Term]
id: UBERON:0001839
name: bony labyrinth
alt_id: UBERON:FMA_60179-MA_0000238-XAO_0000193
def: "." [Wikipedia:Bony_labyrinth]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Bony labyrinth" EXACT []
synonym: "Osseous labyrinth" EXACT []
synonym: "osseous labyrinth" EXACT []
synonym: "osseus labyrinth" RELATED []
xref: FMA:60179 ! Bony labyrinth
xref: MA:0000238 ! bony labyrinth
xref: XAO:0000193 ! osseous labyrinth
is_a: UBERON:0000477 ! anatomical cluster
relationship: part_of UBERON:0001694 ! petrous part of temporal bone
relationship: part_of UBERON:0001846 ! internal ear
xref: ncithesaurus:Osseous_Labyrinth ! Osseous Labyrinth

[Term]
id: UBERON:0001840
name: semicircular canal
alt_id: UBERON:FMA_60186-MA_0000249-XAO_0000198-ZFA_0000431
def: "Fluid-filled toroidal spaces, arranged orthogonally to each other in the ear, that detect angular accelerations. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/semi_canal/semi.html'>semicircular canals</a> by T. Whitfield.)" [Wikipedia:Semicircular_canal, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "scc" RELATED []
synonym: "Semicircular canal" EXACT []
synonym: "semicircular canals" RELATED []
synonym: "semicircular duct" RELATED []
xref: FMA:60186 ! Semicircular canal
xref: GAID:776 ! semicircular canal
xref: HOG:0001144 ! semicircular canal
xref: MA:0000249 ! semicircular canal
xref: TAO:0000431 ! semicircular canal
xref: XAO:0000198 ! semicircular canal
xref: ZFA:0000431 ! semicircular canal
is_a: UBERON:0000477 ! anatomical cluster
relationship: part_of UBERON:0001839 ! bony labyrinth
xref: ncithesaurus:Semicircular_Canal ! Semicircular Canal
xref: BTO:0003383 ! semicircular canal

[Term]
id: UBERON:0001841
name: anterior semicircular canal
alt_id: UBERON:FMA_60187-MA_0001207-ZFA_0000314
def: "One of three fluid-filled toroidal spaces, arranged orthogonally to each other in each ear, that detect angular acceleration. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/semi_canal/semi.html'>semicircular canals</a> by T. Whitfield.)" [Wikipedia:Anterior_semicircular_canal, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Anterior semicircular canal" EXACT []
synonym: "anterior semicircular canals" RELATED []
synonym: "anterior semicircular duct" RELATED []
synonym: "rostral vertical semicircular canal" RELATED []
synonym: "Superior semicircular canal" EXACT []
synonym: "superior semicircular canal" EXACT []
xref: EHDAA:7802 ! superior semicircular canal
xref: FMA:60187 ! Anterior semicircular canal
xref: MA:0001207 ! anterior semicircular canal
xref: TAO:0000314 ! anterior semicircular canal
xref: ZFA:0000314 ! anterior semicircular canal
is_a: UBERON:0001840 ! semicircular canal
relationship: part_of UBERON:0001840 ! semicircular canal
xref: ncithesaurus:Superior_Semicircular_Canal ! Superior Semicircular Canal

[Term]
id: UBERON:0001842
name: posterior semicircular canal
alt_id: UBERON:FMA_60190-MA_0001209-ZFA_0000262
def: "One of three fluid-filled toroidal spaces, arranged orthogonally to each other in each ear, that detect angular acceleration. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/semi_canal/semi.html'>semicircular canals</a> by T. Whitfield.)" [Wikipedia:Posterior_semicircular_canal, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "caudal vertical semicircular canal" RELATED []
synonym: "Posterior semicircular canal" EXACT []
synonym: "posterior semicircular canals" RELATED []
synonym: "posterior semicircular duct" RELATED []
xref: EHDAA:7796 ! posterior semicircular canal
xref: FMA:60190 ! Posterior semicircular canal
xref: MA:0001209 ! posterior semicircular canal
xref: TAO:0000262 ! posterior semicircular canal
xref: ZFA:0000262 ! posterior semicircular canal
is_a: UBERON:0001840 ! semicircular canal
relationship: part_of UBERON:0001840 ! semicircular canal
xref: ncithesaurus:Posterior_Semicircular_Canal ! Posterior Semicircular Canal

[Term]
id: UBERON:0001843
name: lateral semicircular canal
alt_id: UBERON:FMA_60193-MA_0001208-ZFA_0000220
def: "One of three fluid-filled toroidal spaces, arranged orthogonally to each other in each ear, that detect angular acceleration. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/semi_canal/semi.html'>semicircular canals</a> by T. Whitfield.)" [Wikipedia:Lateral_semicircular_canal, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Horizontal semicircular canal" EXACT []
synonym: "horizontal semicircular canal" RELATED []
synonym: "Lateral semicircular canal" EXACT []
synonym: "lateral semicircular canals" RELATED []
synonym: "lateral semicircular duct" RELATED []
xref: EHDAA:7790 ! lateral semicircular canal
xref: FMA:60193 ! Lateral semicircular canal
xref: MA:0001208 ! lateral semicircular canal
xref: TAO:0000220 ! lateral semicircular canal
xref: ZFA:0000220 ! lateral semicircular canal
is_a: UBERON:0001840 ! semicircular canal
relationship: part_of UBERON:0001840 ! semicircular canal

[Term]
id: UBERON:0001844
name: cochlea
alt_id: UBERON:FMA_60201-MA_0000240-MIAA_0000144-XAO_0000197
def: "." [Wikipedia:Cochlea]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Cochlea" EXACT []
synonym: "Cochlear part of bony labyrinth" EXACT []
synonym: "cochlear part of bony labyrinth" EXACT []
synonym: "lagena" EXACT []
xref: AAO:0000253 ! lagena
xref: BTO:0000267
xref: EFO:0000357 ! cochlea
xref: FMA:60201 ! Cochlea
xref: GAID:724 ! cochlea
xref: HOG:0000691 ! cochlea
xref: MA:0000240 ! cochlea
xref: MAT:0000144 ! cochlea
xref: MIAA:0000144 ! cochlea
xref: ncithesaurus:Cochlea
xref: NIF_GrossAnatomy:birnlex_1190 ! Cochlea
xref: NIF_GrossAnatomy:birnlex_883
xref: TAO:0000374 ! lagena
xref: XAO:0000197 ! lagena
xref: ZFA:0000374 ! lagena
is_a: UBERON:0000477 ! anatomical cluster
relationship: part_of UBERON:0001839 ! bony labyrinth

[Term]
id: UBERON:0001845
name: perilymph
alt_id: UBERON:FMA_60908-MA_0002529
def: "Transudate contained in the osseous labyrinth outside the membranous labyrinth." [Wikipedia:Perilymph]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Perilymph" EXACT []
xref: FMA:60908 ! Perilymph
xref: GAID:1185 ! perilymph
xref: MA:0002529 ! perilymph
is_a: UBERON:0000463 ! portion of organism substance
xref: ncithesaurus:Perilymph ! Perilymph

[Term]
id: UBERON:0001846
name: internal ear
alt_id: UBERON:FMA_60909-MA_0000237-MIAA_0000145-XAO_0000192-ZFA_0000217
def: "Complex labyrinthine structure that comprises sensory endorgans specialized for vestibular, auditory, and acoustico-vestibular sensation. // The auditory (hearing) and vestibular (balance) organ of the fish, equivalent to the inner ear of amniotes. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/ear/ear.html'>ear</a> by T. Whitfield.)" [PMID:16217737, Wikipedia:Internal_ear, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "ear" RELATED []
synonym: "Inner Ear" EXACT []
synonym: "inner ear" EXACT []
synonym: "Internal ear" EXACT []
synonym: "labyrinth" RELATED []
synonym: "otic capsule" RELATED []
synonym: "otocyst" RELATED []
xref: AAO:0000238 ! inner_ear
xref: BTO:0000630
xref: EHDAA:504 ! inner ear
xref: FMA:60909 ! Internal ear
xref: galen:InnerEar
xref: HOG:0000284 ! inner ear
xref: MA:0000237 ! inner ear
xref: MAT:0000145 ! inner ear
xref: MIAA:0000145 ! inner ear
xref: NIF_GrossAnatomy:birnlex_1196 ! Inner ear
xref: TAO:0000217 ! inner ear
xref: XAO:0000192 ! inner ear
xref: ZFA:0000217 ! inner ear
is_a: UBERON:0000477 ! anatomical cluster
relationship: part_of UBERON:0001690 ! ear
xref: ncithesaurus:Internal_Ear ! Internal Ear

[Term]
id: UBERON:0001847
name: lobule of pinna
alt_id: UBERON:FMA_60984-MA_0002468
def: "." [Wikipedia:Ear_lobe]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Auricular lobule" EXACT []
synonym: "auricular lobule" EXACT []
synonym: "Ear lobe" EXACT []
synonym: "ear lobe" EXACT []
synonym: "Ear lobule" EXACT []
synonym: "ear lobule" RELATED []
synonym: "Lobe of ear" EXACT []
synonym: "lobe of ear" EXACT []
synonym: "Lobule of auricle" EXACT []
synonym: "lobule of auricle" RELATED []
synonym: "Lobule of auricle of ear" EXACT []
synonym: "lobule of auricle of ear" EXACT []
synonym: "Lobule of pinna" EXACT []
synonym: "Pinna lobule" EXACT []
synonym: "pinna lobule" EXACT []
xref: FMA:60984 ! Lobule of pinna
xref: MA:0002468 ! ear lobe
is_a: UBERON:0001444 ! subdivision of head
relationship: part_of UBERON:0001757 ! pinna

[Term]
id: UBERON:0001848
name: auricular cartilage
alt_id: UBERON:FMA_61013-MA_0001227
comment: This class was created automatically from a combination of ontologies
synonym: "Auricular cartilage" EXACT []
synonym: "Cartilage of pinna" EXACT []
synonym: "cartilage of pinna" EXACT []
xref: FMA:61013 ! Auricular cartilage
xref: MA:0001227 ! auricular cartilage
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001757 ! pinna

[Term]
id: UBERON:0001849
name: membranous labyrinth
alt_id: UBERON:FMA_61022-MA_0000242-XAO_0000194
def: "Organ with organ cavity which consists of the vestibular labyrinth and the cochlear labyrinth. Examples: There are only two membranous labyrinths, the right and the left." [Wikipedia:Membranous_labyrinth]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Membranous labyrinth" EXACT []
xref: FMA:61022 ! Membranous labyrinth
xref: HOG:0000729 ! membranous labyrinth
xref: MA:0000242 ! membranous labyrinth
xref: XAO:0000194 ! membranous labyrinth
is_a: UBERON:0000062 ! organ
relationship: part_of UBERON:0001846 ! internal ear
xref: ncithesaurus:Membranous_Labyrinth ! Membranous Labyrinth

[Term]
id: UBERON:0001850
name: lacrimal duct
alt_id: UBERON:FMA_61063-MA_0001295
def: "Organ with organ cavity which connects the vestibule of the conjunctival sac to the nasal cavity. Examples: There are only two lacrimal ducts, the right and the left lacrimal ducts." [Wikipedia:Lacrimal_duct]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Lacrimal duct" EXACT []
synonym: "tear duct" RELATED []
xref: FMA:61063 ! Lacrimal duct
xref: MA:0001295 ! lacrimal duct
is_a: UBERON:0000058 ! duct
relationship: part_of UBERON:0001750 ! lacrimal apparatus

[Term]
id: UBERON:0001851
name: cortex
alt_id: UBERON:FMA_61109-XAO_0000216
def: "Outermost layer of an organ[WP]." [Wikipedia:Cortex_(anatomy)]
comment: This class is used in a very general sense
subset: uberon_slim
synonym: "Cortex" EXACT []
xref: EFO:0000383 ! cortex
xref: galen:Cortex
is_a: UBERON:0000064 ! organ part
relationship: surrounds UBERON:0000062 ! organ
xref: FMA:61109 ! Cortex

[Term]
id: UBERON:0001852
name: endolymph
alt_id: UBERON:FMA_61112-MA_0002528
def: "Transudate contained within the membranous labyrinth." [Wikipedia:Endolymph]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Endolymph" EXACT []
xref: FMA:61112 ! Endolymph
xref: GAID:1184 ! endolymph
xref: MA:0002528 ! endolymph
is_a: UBERON:0000463 ! portion of organism substance
xref: ncithesaurus:Endolymph ! Endolymph

[Term]
id: UBERON:0001853
name: utricle of membranous labyrinth
alt_id: UBERON:FMA_61113-MA_0000247-XAO_0000195-ZFA_0000700
def: "." [Wikipedia:Utricle]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Membranous labyrinth utricle" EXACT []
synonym: "membranous labyrinth utricle" EXACT []
synonym: "Utricle" EXACT []
synonym: "utricle" EXACT []
synonym: "Utricle of membranous labyrinth" EXACT []
synonym: "Utriculus (Labyrinthus vestibularis)" EXACT []
synonym: "utriculus (labyrinthus vestibularis)" EXACT []
xref: EHDAA:4726 ! utricle
xref: FMA:61113 ! Utricle of membranous labyrinth
xref: HOG:0000289 ! utricle
xref: MA:0000247 ! utricle
xref: TAO:0000700 ! utricle
xref: XAO:0000195 ! utricle
xref: ZFA:0000700 ! utricle
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001862 ! vestibular labyrinth
xref: ncithesaurus:Utricle ! Utricle
xref: BTO:0001807 ! utricle

[Term]
id: UBERON:0001854
name: saccule of membranous labyrinth
alt_id: UBERON:FMA_61116-MA_0000246-ZFA_0000428
def: "." [Wikipedia:Saccule]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Membranous labyrinth saccule" EXACT []
synonym: "membranous labyrinth saccule" EXACT []
synonym: "Saccule" EXACT []
synonym: "saccule" EXACT []
synonym: "Saccule of membranous labyrinth" EXACT []
synonym: "Sacculus (Labyrinthus vestibularis)" EXACT []
synonym: "sacculus (labyrinthus vestibularis)" EXACT []
xref: EHDAA:4712 ! saccule
xref: FMA:61116 ! Saccule of membranous labyrinth
xref: HOG:0000374 ! saccule
xref: MA:0000246 ! saccule
xref: TAO:0000428 ! saccule
xref: ZFA:0000428 ! saccule
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001862 ! vestibular labyrinth
xref: ncithesaurus:Saccule ! Saccule
xref: BTO:0001805 ! saccule

[Term]
id: UBERON:0001855
name: cochlear duct of membranous labyrinth
alt_id: UBERON:FMA_61119-MA_0000243
def: "." [Wikipedia:Cochlear_duct]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Cochlear duct" EXACT []
synonym: "cochlear duct" EXACT []
synonym: "Cochlear duct of membranous labyrinth" EXACT []
synonym: "Reissner's canal" EXACT []
synonym: "reissner's canal" EXACT []
xref: EHDAA:4718 ! cochlear duct
xref: FMA:61119 ! Cochlear duct of membranous labyrinth
xref: GAID:874 ! cochlear duct
xref: HOG:0000507 ! cochlear duct
xref: MA:0000243 ! cochlear duct
is_a: UBERON:0000058 ! duct
relationship: part_of UBERON:0001844 ! cochlea
relationship: part_of UBERON:0001849 ! membranous labyrinth
xref: ncithesaurus:Cochlear_Duct ! Cochlear Duct
xref: BTO:0001692 ! cochlear duct

[Term]
id: UBERON:0001856
name: semicircular duct
alt_id: UBERON:FMA_61122-MA_0000251
comment: This class was created automatically from a combination of ontologies
synonym: "membranous semicircular canal" RELATED []
synonym: "Semicircular duct" EXACT []
xref: FMA:61122 ! Semicircular duct
xref: HOG:0000238 ! semicircular duct
xref: MA:0000251 ! semicircular duct
is_a: UBERON:0000058 ! duct
relationship: part_of UBERON:0001840 ! semicircular canal
relationship: part_of UBERON:0001862 ! vestibular labyrinth
xref: ncithesaurus:Semicircular_Duct ! Semicircular Duct

[Term]
id: UBERON:0001857
name: anterior semicircular duct
alt_id: UBERON:FMA_61123-MA_0001211
comment: This class was created automatically from a combination of ontologies
synonym: "Anterior semicircular duct" EXACT []
xref: FMA:61123 ! Anterior semicircular duct
xref: HOG:0000246 ! anterior semicircular duct
xref: MA:0001211 ! anterior semicircular duct
is_a: UBERON:0001856 ! semicircular duct

[Term]
id: UBERON:0001858
name: posterior semicircular duct
alt_id: UBERON:FMA_61126-MA_0001214
def: "." [Wikipedia:Posterior_semicircular_duct]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Posterior semicircular duct" EXACT []
xref: FMA:61126 ! Posterior semicircular duct
xref: HOG:0000248 ! posterior semicircular duct
xref: MA:0001214 ! posterior semicircular duct
is_a: UBERON:0001856 ! semicircular duct

[Term]
id: UBERON:0001859
name: lateral semicircular duct
alt_id: UBERON:FMA_61129-MA_0001213
def: "." [Wikipedia:Lateral_semicircular_duct]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Lateral semicircular duct" EXACT []
xref: FMA:61129 ! Lateral semicircular duct
xref: HOG:0000247 ! lateral semicircular duct
xref: MA:0001213 ! lateral semicircular duct
is_a: UBERON:0001856 ! semicircular duct

[Term]
id: UBERON:0001860
name: endolymphatic duct
alt_id: UBERON:FMA_61246-MA_0001187
def: "." [Wikipedia:Endolymphatic_duct]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Endolymphatic duct" EXACT []
xref: FMA:61246 ! Endolymphatic duct
xref: GAID:886 ! endolymphatic duct
xref: MA:0001187 ! endolymphatic duct
is_a: UBERON:0000058 ! duct
relationship: part_of UBERON:0002049 ! vasculature

[Term]
id: UBERON:0001861
name: ductus reuniens
alt_id: UBERON:FMA_61252-MA_0000244
comment: This class was created automatically from a combination of ontologies
synonym: "Ductus reuniens" EXACT []
xref: FMA:61252 ! Ductus reuniens
xref: MA:0000244 ! ductus reuniens
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001849 ! membranous labyrinth

[Term]
id: UBERON:0001862
name: vestibular labyrinth
alt_id: UBERON:FMA_61255-MA_0000245
comment: This class was created automatically from a combination of ontologies
synonym: "vestibular apparatus" RELATED []
synonym: "Vestibular labyrinth" EXACT []
xref: FMA:61255 ! Vestibular labyrinth
xref: MA:0000245 ! vestibular labyrinth
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001849 ! membranous labyrinth
xref: ncithesaurus:Vestibular_Labyrinth ! Vestibular Labyrinth
xref: BTO:0001856 ! vestibular labyrinth

[Term]
id: UBERON:0001863
name: scala vestibuli
alt_id: UBERON:FMA_61269-MA_0001206
def: "." [Wikipedia:Scala_vestibuli]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Scala vestibuli" EXACT []
xref: FMA:61269 ! Scala vestibuli
xref: MA:0001206 ! scala vestibuli
is_a: UBERON:0000477 ! anatomical cluster
relationship: part_of UBERON:0001844 ! cochlea
relationship: part_of UBERON:0002278 ! perilymphatic space

[Term]
id: UBERON:0001864
name: scala tympani
alt_id: UBERON:FMA_61272-MA_0001205
def: "." [Wikipedia:Scala_tympani]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Scala tympani" EXACT []
xref: FMA:61272 ! Scala tympani
xref: GAID:879 ! scala tympani
xref: MA:0001205 ! scala tympani
is_a: UBERON:0000477 ! anatomical cluster
relationship: part_of UBERON:0001844 ! cochlea
relationship: part_of UBERON:0002278 ! perilymphatic space

[Term]
id: UBERON:0001865
name: cartilaginous external acoustic tube
alt_id: UBERON:FMA_61289-MA_0001234
comment: This class was created automatically from a combination of ontologies
synonym: "Cartilaginous external acoustic meatus" EXACT []
synonym: "cartilaginous external acoustic meatus" EXACT []
synonym: "Cartilaginous external acoustic tube" EXACT []
synonym: "Cartilaginous part of external acoustic meatus" EXACT []
synonym: "cartilaginous part of external acoustic meatus" EXACT []
synonym: "external acoustic meatus cartilaginous part" EXACT []
xref: FMA:61289 ! Cartilaginous external acoustic tube
xref: MA:0001234 ! external acoustic meatus cartilaginous part
is_a: UBERON:0000477 ! anatomical cluster
relationship: part_of UBERON:0001352 ! external acoustic meatus

[Term]
id: UBERON:0001866
name: sebum
alt_id: UBERON:FMA_61304-MA_0002538
def: "." [Wikipedia:Sebum]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Sebum" EXACT []
xref: ENVO:02000037
xref: FMA:61304 ! Sebum
xref: GAID:1168 ! sebum
xref: MA:0002538 ! sebum
is_a: UBERON:0000463 ! portion of organism substance
xref: ncithesaurus:Sebum ! Sebum
xref: BTO:0001981 ! sebum

[Term]
id: UBERON:0001867
name: cartilage of external ear
alt_id: UBERON:FMA_61339-MA_0001886
comment: This class was created automatically from a combination of ontologies
synonym: "Cartilage of external ear" EXACT []
synonym: "External ear cartilage" EXACT []
synonym: "external ear cartilage" EXACT []
xref: FMA:61339 ! Cartilage of external ear
xref: MA:0001886 ! external ear cartilage
is_a: UBERON:0001996 ! elastic cartilage
intersection_of: UBERON:0002418 ! cartilage
intersection_of: part_of UBERON:0001691 ! external ear
relationship: part_of UBERON:0001691 ! external ear
xref: ncithesaurus:External_Ear_Cartilage ! External Ear Cartilage

[Term]
id: UBERON:0001868
name: skin of chest
alt_id: UBERON:FMA_61415-MA_0000553
comment: This class was created automatically from a combination of ontologies
synonym: "Chest skin" EXACT []
synonym: "chest skin" EXACT []
synonym: "Skin of chest" EXACT []
xref: FMA:61415
xref: MA:0000553 ! chest skin
is_a: UBERON:0001418 ! skin of thorax
intersection_of: UBERON:0000014 ! zone of skin
intersection_of: part_of UBERON:0001443 ! chest
relationship: part_of UBERON:0001443 ! chest

[Term]
id: UBERON:0001869
name: cerebral hemisphere
alt_id: UBERON:FMA_61817-MA_0000133
def: "One of two bilateral, largely symmetrical organ subdivisions within the telencephalon which contain the cerebral cortex and cerebral white matter." [Wikipedia:Cerebral_hemisphere]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Cerebral hemisphere" EXACT []
synonym: "cerebrum" RELATED []
xref: BTO:0000231
xref: FMA:61817 ! Cerebral hemisphere
xref: galen:CerebralHemisphere
xref: MA:0000133 ! cerebral hemisphere
xref: ncithesaurus:Cerebral_Hemisphere
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001893 ! telencephalon

[Term]
id: UBERON:0001870
name: frontal lobe
alt_id: UBERON:FMA_61824-MA_0000905
def: "Frontal lobe is the anterior-most of five lobes of the cerebral hemisphere. It is bounded by the central sulcus on its posterior border and by the longitudinal cerebral fissure on its medial border." [Wikipedia:Frontal_lobe]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Frontal cortex" EXACT []
synonym: "frontal cortex" EXACT []
synonym: "Frontal lobe" EXACT []
synonym: "Frontal region" EXACT []
synonym: "frontal region" EXACT []
xref: BTO:0000484
xref: EFO:0000913 ! frontal lobe
xref: FMA:61824 ! Frontal lobe
xref: GAID:674 ! frontal lobe
xref: MA:0000905 ! frontal cortex
xref: MAT:0000505 ! frontal lobe
xref: ncithesaurus:Frontal_Lobe
xref: NIF_GrossAnatomy:birnlex_928 ! Frontal lobe
xref: OpenCyc:Mx4rv3OJ8JwpEbGdrcN5Y29ycA
is_a: UBERON:0000064 ! organ part
relationship: adjacent_to UBERON:0001871 ! temporal lobe
relationship: adjacent_to UBERON:0001872 ! parietal lobe
relationship: part_of UBERON:0001950 ! neocortex

[Term]
id: UBERON:0001871
name: temporal lobe
alt_id: UBERON:FMA_61825-MA_0000941
def: "Temporal lobe is the ventrolateral lobe of five lobes comprising each cerebral hemisphere. It is bounded dorsally by the lateral fissure and posteriorly by an arbitrary border shared with the occipital lobe." [Wikipedia:Temporal_lobe]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Temporal cortex" EXACT []
synonym: "temporal cortex" EXACT []
synonym: "Temporal lobe" EXACT []
xref: BTO:0001355
xref: EFO:0000917 ! temporal lobe
xref: FMA:61825 ! Temporal lobe
xref: GAID:635 ! temporal lobe
xref: MA:0000941 ! temporal cortex
xref: MAT:0000508 ! temporal lobe
xref: ncithesaurus:Temporal_Lobe
xref: NIF_GrossAnatomy:birnlex_1160 ! Temporal lobe
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001950 ! neocortex

[Term]
id: UBERON:0001872
name: parietal lobe
alt_id: UBERON:FMA_61826-MA_0000916
def: "Parietal lobe is the one of five lobes of the cerebral hemisphere which occupies the dorsal-posterior portion of the hemisphere. It is bounded by the central sulcus on its anterior border and and by the longitudinal cerebral fissure on its medial border. Posteriorly it shares an arbitrary border with the occipital lobe." [Wikipedia:Parietal_lobe]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Parietal cortex" EXACT []
synonym: "parietal cortex" EXACT []
synonym: "Parietal lobe" EXACT []
synonym: "Parietal region" EXACT []
synonym: "parietal region" EXACT []
xref: BTO:0001001
xref: EFO:0000914 ! parietal lobe
xref: FMA:61826 ! Parietal lobe
xref: GAID:680 ! parietal lobe
xref: MA:0000916 ! parietal cortex
xref: MAT:0000506 ! parietal lobe
xref: ncithesaurus:Parietal_Lobe_of_the_Brain
xref: NIF_GrossAnatomy:birnlex_1148 ! Parietal lobe
xref: OpenCyc:Mx4rvg-typwpEbGdrcN5Y29ycA
is_a: UBERON:0000064 ! organ part
relationship: adjacent_to UBERON:0001871 ! temporal lobe
relationship: part_of UBERON:0001950 ! neocortex

[Term]
id: UBERON:0001873
name: caudate nucleus
alt_id: UBERON:FMA_61833-MA_0000894
def: "Nucleus of brain which is an elongated crescent-shaped mass lying parallel and adjacent to the lateral ventricle throughout its extent." [Wikipedia:Caudate_nucleus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Caudate nucleus" EXACT []
synonym: "Caudatus" EXACT []
synonym: "caudatus" EXACT []
xref: BTO:0000211
xref: EFO:0000907 ! caudate nucleus
xref: FMA:61833 ! Caudate nucleus
xref: GAID:670 ! caudate nucleu
xref: MA:0000894 ! caudate nucleus
xref: MAT:0000513 ! caudate nucleus
xref: NIF_GrossAnatomy:birnlex_1373 ! Caudate nucleus
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0001869 ! cerebral hemisphere
relationship: part_of UBERON:0002435 ! striatum
xref: ncithesaurus:Caudate_Nucleus ! Caudate Nucleus

[Term]
id: UBERON:0001874
name: putamen
alt_id: UBERON:FMA_61834-MA_0000895
def: "Nucleus of brain which lies ventral to the caudate nucleus and internal capsule and medial to the external capsule. The putamen and caudate nucleus together form the dorsal striatum. It is also one of the structures that comprises the basal ganglia. Through various pathways, the putamen is connected to the substantia nigra and globus pallidus. The main function of the putamen is to regulate movements and influence various types of learning. It employs dopamine to perform its functions. The putamen also plays a role in degenerative neurological disorders, such as Parkinson's disease." [Wikipedia:Putamen]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Nucleus putamen" EXACT []
synonym: "nucleus putamen" EXACT []
synonym: "Putamen" EXACT []
xref: FMA:61834 ! Putamen
xref: GAID:671 ! putamen
xref: HOG:0001456 ! putamen
xref: MA:0000895 ! putamen
xref: NIF_GrossAnatomy:birnlex_809 ! Putamen
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0001869 ! cerebral hemisphere
relationship: part_of UBERON:0002435 ! striatum
xref: ncithesaurus:Putamen ! Putamen

[Term]
id: UBERON:0001875
name: globus pallidus
alt_id: UBERON:FMA_61835-MA_0000890
def: "Nucleus of brain which is located medially to the putamen and laterally to the internal capsule." [Wikipedia:Globus_pallidus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Globus pallidus" EXACT []
synonym: "Paleostriatum" EXACT []
synonym: "paleostriatum" EXACT []
xref: EFO:0000905 ! globus pallidus
xref: FMA:61835 ! Globus pallidus
xref: GAID:668 ! globus pallidus
xref: MA:0000890 ! globus pallidus
xref: MAT:0000510 ! globus pallidus
xref: NIF_GrossAnatomy:birnlex_1234 ! Globus pallidus
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0001869 ! cerebral hemisphere
relationship: part_of UBERON:0001894 ! diencephalon
xref: ncithesaurus:Globus_Pallidus ! Globus Pallidus
xref: BTO:0002246 ! globus pallidus

[Term]
id: UBERON:0001876
name: amygdala
alt_id: UBERON:FMA_61841-MA_0000887-MIAA_0000289
def: "Subdivision of basal ganglion of telencephalon which is an almond-shaped gray mass in the dorsomedial part of the temporal lobe [FMA]," [Wikipedia:Amygdala]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Amygdala" EXACT []
synonym: "amygdaloid area" RELATED []
synonym: "Amygdaloid body" EXACT []
synonym: "amygdaloid body" EXACT []
synonym: "Amygdaloid complex" EXACT []
synonym: "amygdaloid complex" EXACT []
synonym: "Amygdaloid nuclear complex" EXACT []
synonym: "amygdaloid nuclear complex" EXACT []
synonym: "Amygdaloid nuclear groups" EXACT []
synonym: "amygdaloid nuclear groups" EXACT []
synonym: "Amygdaloid nucleus" EXACT []
synonym: "amygdaloid nucleus" EXACT []
synonym: "Archistriatum" EXACT []
synonym: "archistriatum" EXACT []
xref: BTO:0001042
xref: EFO:0000252 ! amygdala
xref: FMA:61841 ! Amygdala
xref: GAID:616 ! amygdala
xref: HOG:0001277 ! amygdala
xref: MA:0000887 ! amygdala
xref: MAT:0000289 ! amygdala
xref: MIAA:0000289 ! amygdala
xref: NIF_GrossAnatomy:birnlex_1241 ! Amygdala
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0000349 ! limbic system
relationship: part_of UBERON:0001869 ! cerebral hemisphere
relationship: part_of UBERON:0002420 ! basal ganglia
xref: ncithesaurus:Amygdala ! Amygdala

[Term]
id: UBERON:0001877
name: medial septal nucleus
alt_id: UBERON:FMA_61879-MA_0000935
comment: This class was created automatically from a combination of ontologies
synonym: "Medial parolfactory nucleus" EXACT []
synonym: "medial parolfactory nucleus" EXACT []
synonym: "Medial septal nucleus" EXACT []
xref: FMA:61879 ! Medial septal nucleus
xref: MA:0000935 ! medial septal nucleus
xref: NIF_GrossAnatomy:birnlex_1668 ! Medial septal nucleus
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0001878
name: septofimbrial nucleus
alt_id: UBERON:FMA_61881-MA_0000938
comment: This class was created automatically from a combination of ontologies
synonym: "Scattered nucleus of the septum" EXACT []
synonym: "scattered nucleus of the septum" EXACT []
synonym: "Septofimbrial nucleus" EXACT []
xref: FMA:61881 ! Septofimbrial nucleus
xref: MA:0000938 ! septofimbrial nucleus
xref: NIF_GrossAnatomy:birnlex_730 ! Septofimbrial nucleus
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0001879
name: nucleus of diagonal band
alt_id: UBERON:FMA_61882-MA_0000936
comment: This class was created automatically from a combination of ontologies
synonym: "Diagonal band nucleus" EXACT []
synonym: "diagonal band nucleus" EXACT []
synonym: "Nucleus of diagonal band" EXACT []
synonym: "Nucleus of the diagonal band of Broca" EXACT []
synonym: "nucleus of the diagonal band of broca" EXACT []
synonym: "Olfactory area (Roberts)" EXACT []
synonym: "olfactory area (roberts)" EXACT []
xref: FMA:61882 ! Nucleus of diagonal band
xref: MA:0000936 ! nucleus of diagonal band
xref: NIF_GrossAnatomy:birnlex_719 ! Nucleus of diagonal band
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0001880
name: nucleus of stria terminalis
alt_id: UBERON:FMA_61884-MA_0000925
comment: This class was created automatically from a combination of ontologies
synonym: "Bed nucleus of stria terminalis" EXACT []
synonym: "bed nucleus of stria terminalis" EXACT []
synonym: "Intercalate nucleus of stria terminalis" EXACT []
synonym: "intercalate nucleus of stria terminalis" EXACT []
synonym: "Nuclei of stria terminalis" EXACT []
synonym: "nuclei of stria terminalis" EXACT []
synonym: "Nucleus of stria terminalis" EXACT []
synonym: "Stria terminalis nucleus" EXACT []
synonym: "stria terminalis nucleus" EXACT []
xref: FMA:61884 ! Nucleus of stria terminalis
xref: MA:0000925 ! bed nucleus of stria terminalis
xref: NIF_GrossAnatomy:birnlex_724 ! Nucleus of stria terminalis
is_a: UBERON:0002308 ! nucleus of brain
xref: BTO:0002698 ! bed nucleus of stria terminalis

[Term]
id: UBERON:0001881
name: island of calleja
alt_id: UBERON:FMA_61888-MA_0000977
def: "." [Wikipedia:Islands_of_Calleja]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Calleja island" EXACT []
synonym: "calleja island" EXACT []
synonym: "Island of Calleja" EXACT []
synonym: "Islands of Calleja" EXACT []
synonym: "islands of Calleja" EXACT []
synonym: "islands of calleja" EXACT []
xref: FMA:61888 ! Island of Calleja
xref: GAID:632 ! islands of calleja
xref: MA:0000977 ! islands of Calleja
xref: NIF_GrossAnatomy:birnlex_1113 ! Islands of Calleja
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0001883 ! anterior perforated substance

[Term]
id: UBERON:0001882
name: nucleus accumbens
alt_id: UBERON:FMA_61889-MA_0000892
def: "a collection of pleomorphic cells in the caudal part of the anterior horn of the lateral ventricle, in the region of the olfactory tubercle, lying between the head of the caudate nucleus and the anterior perforated substance. It is part of the ventral striatum, a composite structure considered part of the basal ganglia[GO]." [GO:0021768, Wikipedia:Nucleus_accumbens]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Accumbens nucleus" EXACT []
synonym: "accumbens nucleus" EXACT []
synonym: "Colliculus of caudate nucleus" EXACT []
synonym: "colliculus of caudate nucleus" EXACT []
synonym: "Nucleus accumbens" EXACT []
synonym: "Nucleus accumbens septi" EXACT []
synonym: "nucleus accumbens septi" EXACT []
xref: EFO:0000906 ! accumbens nucleus
xref: FMA:61889 ! Nucleus accumbens
xref: GAID:672 ! nucleus accumben
xref: MA:0000892 ! accumbens nucleus
xref: MAT:0000512 ! accumbens nucleus
xref: NIF_GrossAnatomy:birnlex_727 ! Nucleus accumbens
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0001869 ! cerebral hemisphere
relationship: part_of UBERON:0002435 ! striatum
xref: ncithesaurus:Accumbens_Nucleus ! Accumbens Nucleus
xref: BTO:0001862 ! nucleus accumbens

[Term]
id: UBERON:0001883
name: anterior perforated substance
alt_id: UBERON:FMA_61891-MA_0000976
def: "Subdivision of telencephalon which is a region on the ventro-medial aspect of the telencephalon penetrated by numerous blood vessels. It is bounded by the optic tract posteriorly and the olfactory trigone anteriorly." [Wikipedia:Anterior_perforated_substance]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Anterior perforated area" EXACT []
synonym: "anterior perforated area" EXACT []
synonym: "Anterior perforated space" EXACT []
synonym: "anterior perforated space" EXACT []
synonym: "Anterior perforated substance" EXACT []
synonym: "Olfactory area (Mai)" EXACT []
synonym: "olfactory area (mai)" EXACT []
synonym: "Olfactory tubercle" EXACT []
synonym: "olfactory tubercle" EXACT []
xref: FMA:61891 ! Anterior perforated substance
xref: MA:0000976 ! olfactory tubercle
xref: NIF_GrossAnatomy:birnlex_1096 ! Anterior perforated substance
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001869 ! cerebral hemisphere
xref: BTO:0001869 ! olfactory tubercle

[Term]
id: UBERON:0001884
name: phrenic nerve
alt_id: UBERON:FMA_6191-MA_0001170
def: "." [Wikipedia:Phrenic_nerve]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Phrenic nerve" EXACT []
xref: BTO:0001063
xref: FMA:6191 ! Phrenic nerve
xref: GAID:848 ! phrenic nerve
xref: HOG:0000728 ! phrenic nerve
xref: MA:0001170 ! phrenic nerve
is_a: UBERON:0002003 ! peripheral nerve
relationship: part_of UBERON:0002224 ! thoracic cavity
xref: ncithesaurus:Phrenic_Nerve ! Phrenic Nerve

[Term]
id: UBERON:0001885
name: dentate gyrus of hippocampal formation
alt_id: UBERON:FMA_61922-MA_0000190
def: "The dentate gyrus is one of two interlocking gyri of the hippocampus. It contains granule cells, which project to the pyramidal cells and interneurons of the CA3 region of the ammon gyrus[GO]." [Wikipedia:Dentate_gyrus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Area dentata" EXACT []
synonym: "area dentata" EXACT []
synonym: "Dentate gyrus" EXACT []
synonym: "dentate gyrus" EXACT []
synonym: "Dentate gyrus of hippocampal formation" EXACT []
synonym: "Fascia dentata" EXACT []
synonym: "fascia dentata" EXACT []
xref: FMA:61922 ! Dentate gyrus of hippocampal formation
xref: GAID:624 ! dentate gyrus
xref: MA:0000190 ! dentate gyrus
xref: NIF_GrossAnatomy:birnlex_1178 ! Dentate gyrus
xref: NIF_GrossAnatomy:birnlex_1191 ! Fascia dentata
is_a: UBERON:0000200 ! gyrus
relationship: part_of UBERON:0001954 ! hippocampus
xref: ncithesaurus:Dentate_Gyrus ! Dentate Gyrus
xref: BTO:0002496 ! dentate gyrus

[Term]
id: UBERON:0001886
name: choroid plexus of cerebral hemisphere
alt_id: UBERON:FMA_61934-MA_0000823-ZFA_0001443
def: "A tuft of capillaries that project into the ventricles of the brain and secretes cerebral spinal fluid. The choroid plexus is covered by a cuboidal epithelium which maintains the integrity of the blood-brain barrier." [Wikipedia:Choroid_plexus, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Chorioid plexus" EXACT []
synonym: "chorioid plexus" EXACT []
synonym: "Choroid plexus" EXACT []
synonym: "choroid plexus" EXACT []
synonym: "Choroid plexus of cerebral hemisphere" EXACT []
xref: BTO:0000258
xref: FMA:61934 ! Choroid plexus of cerebral hemisphere
xref: GAID:607 ! choroid plexus
xref: MA:0000823 ! choroid plexus
xref: TAO:0001443 ! choroid plexus
xref: ZFA:0001443 ! choroid plexus
is_a: UBERON:0002553 ! anatomical cavity
relationship: part_of UBERON:0001869 ! cerebral hemisphere
relationship: part_of UBERON:0002300 ! ventricle
xref: ncithesaurus:Choroid_Plexus ! Choroid Plexus

[Term]
id: UBERON:0001887
name: internal capsule
alt_id: UBERON:FMA_61950-MA_0002748
def: "Internal capsule is an organ subdivision of the telencephalon which is made up primarily of myelinated axonal neural tissue (white matter). The internal capsule is a major set of fiber bundles lateral to the thalamus and caudate nucleus and medial to the putamen and globus pallidus. It projects dorsally to the white matter underlying the cerebral cortex." [Wikipedia:Internal_capsule]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Internal capsule" EXACT []
synonym: "Internal capsule radiations" EXACT []
synonym: "internal capsule radiations" EXACT []
xref: FMA:61950 ! Internal capsule
xref: GAID:685 ! internal capsule
xref: MA:0002748 ! internal capsule
xref: NIF_GrossAnatomy:birnlex_1659 ! Internal capsule
is_a: UBERON:0002437 ! cerebral white matter
relationship: part_of UBERON:0001869 ! cerebral hemisphere
xref: ncithesaurus:Internal_Capsule ! Internal Capsule

[Term]
id: UBERON:0001888
name: lateral olfactory stria
alt_id: UBERON:FMA_61971-ZFA_0000229
def: "." [Wikipedia:Lateral_olfactory_stria]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Lateral olfactory stria" EXACT []
synonym: "Lateral olfactory tract" EXACT []
synonym: "lateral olfactory tract" EXACT []
xref: FMA:61971 ! Lateral olfactory stria
xref: NIF_GrossAnatomy:birnlex_1559 ! Lateral olfactory stria
xref: TAO:0000229 ! lateral olfactory tract
xref: ZFA:0000229 ! lateral olfactory tract
is_a: UBERON:0000481 ! multi-tissue structure
relationship: part_of UBERON:0001893 ! telencephalon

[Term]
id: UBERON:0001889
name: trunk of phrenic nerve
alt_id: UBERON:FMA_6198-MA_0001177
comment: This class was created automatically from a combination of ontologies
synonym: "phrenic nerve trunk" EXACT []
synonym: "Phrenic neural trunk" EXACT []
synonym: "phrenic neural trunk" EXACT []
synonym: "Trunk of phrenic nerve" EXACT []
xref: FMA:6198 ! Trunk of phrenic nerve
xref: MA:0001177 ! phrenic nerve trunk
is_a: UBERON:0001147 ! trunk of peripheral nerve
relationship: part_of UBERON:0001884 ! phrenic nerve

[Term]
id: UBERON:0001890
name: forebrain
alt_id: UBERON:FMA_61992-MA_0000170-MIAA_0000105-XAO_0000011-ZFA_0000109
def: "Organ component of neuraxis that has as its parts the telencephalon, diencephalon, lateral ventricles and third ventricle. Examples: There is only one forebrain. // The most anterior region the brain including both the telencephalon and diencephalon. <a href='http://zfin.org/cgi-bin/ZFIN_jump?record=ZDB-PUB-961014-576'>Kimmel et al, 1995.</a>" [Wikipedia:Forebrain, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Forebrain" EXACT []
synonym: "prosencephalon" RELATED []
xref: BTO:0000478
xref: EFO:0000909 ! forebrain
xref: EHDAA:3470 ! forebrain
xref: FMA:61992 ! Forebrain
xref: HOG:0000383 ! forebrain
xref: MA:0000170 ! forebrain
xref: MAT:0000105 ! forebrain
xref: MIAA:0000105 ! forebrain
xref: NIF_GrossAnatomy:birnlex_1509 ! Forebrain
xref: TAO:0000109 ! forebrain
xref: XAO:0000011 ! forebrain
xref: ZFA:0000109 ! forebrain
is_a: UBERON:0002616 ! regional part of brain
relationship: develops_from UBERON:0003080 ! anterior neural tube
relationship: part_of UBERON:0000955 ! brain

[Term]
id: UBERON:0001891
name: midbrain
alt_id: UBERON:FMA_61993-MA_0000207-MIAA_0000106-XAO_0000014-ZFA_0000128
def: "Organ component of neuraxis that has as its parts the tectum, cerebral peduncle, midbrain tegmentum and cerebral aqueduct. Examples: There is only one midbrain. [FMA]// The brain region between the forebrain anteriorly and the hindbrain posteriorly, including the tectum dorsally and the midbrain tegmentum ventrally. <a href='http://zfin.org/cgi-bin/ZFIN_jump?record=ZDB-PUB-961014-576'>Kimmel et al, 1995.</a>" [Wikipedia:Midbrain, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "mesencephalon" RELATED []
synonym: "Midbrain" EXACT []
xref: BTO:0000138
xref: EFO:0000919 ! midbrain
xref: EHDAA:3694 ! midbrain
xref: FMA:61993 ! Midbrain
xref: HOG:0000069 ! midbrain
xref: MA:0000207 ! midbrain
xref: MAT:0000106 ! midbrain
xref: MIAA:0000106 ! midbrain
xref: NIF_GrossAnatomy:birnlex_1667 ! Midbrain
xref: TAO:0000128 ! midbrain
xref: XAO:0000014 ! midbrain
xref: ZFA:0000128 ! midbrain
is_a: UBERON:0002616 ! regional part of brain
relationship: develops_from UBERON:0003080 ! anterior neural tube
relationship: part_of UBERON:0002298 ! brainstem

[Term]
id: UBERON:0001892
name: segment of hindbrain
alt_id: UBERON:FMA_61998-MIAA_0000272-ZFA_0001064
def: "a segment of the rhombencephalon // A segment of the developing hindbrain. <a href='http://zfin.org/cgi-bin/ZFIN_jump?record=ZDB-PUB-961014-576'>Kimmel et al, 1995.</a>" [Wikipedia:Rhombomere, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "future rhombencephalon" RELATED [MIAA:0000272]
synonym: "Hindbrain segment" EXACT []
synonym: "hindbrain segment" RELATED []
synonym: "rhombomere" EXACT []
synonym: "rhombomeres" RELATED []
synonym: "Segment of hindbrain" EXACT []
xref: FMA:61998 ! Segment of hindbrain
xref: HOG:0000672 ! rhombomere
xref: MAT:0000272 ! rhombomere
xref: MIAA:0000272 ! rhombomere
xref: TAO:0001064 ! rhombomere
xref: ZFA:0001064 ! rhombomere
is_a: UBERON:0000073 ! regional part of nervous system
relationship: part_of UBERON:0002028 ! hindbrain

[Term]
id: UBERON:0001893
name: telencephalon
alt_id: UBERON:FMA_6200-FMA_62000-MA_0000183-MIAA_0000421-XAO_0000012-ZFA_0000079
def: "Organ component of neuraxis that has as its parts the cerebral cortex, cerebral white matter, basal ganglia, septum and fornix, as well as subcortical gray and white matter structures. There is only one telencephalon. // The anterior and dorsal forebrain neuromere, includes the olfactory bulb. <a href='http://zfin.org/cgi-bin/ZFIN_jump?record=ZDB-PUB-961014-576'>Kimmel et al, 1995.</a>" [Wikipedia:Telencephalon, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "cerebrum" RELATED []
synonym: "telencephalic vesicle" RELATED []
synonym: "Telencephalon" EXACT []
synonym: "telencephalon" EXACT []
xref: BTO:0000239
xref: EFO:0000912 ! telencephalon
xref: FMA:62000 ! Telencephalon
xref: GAID:621 ! telencephalon
xref: HOG:0000283 ! telencephalon
xref: MA:0000183 ! telencephalon
xref: MAT:0000421 ! telencephalon
xref: MIAA:0000421 ! telencephalon
xref: NIF_GrossAnatomy:birnlex_1115 ! Telencephalon
xref: TAO:0000079 ! telencephalon
xref: XAO:0000012 ! telencephalon
xref: ZFA:0000079 ! telencephalon
is_a: UBERON:0002780 ! regional part of forebrain
relationship: part_of UBERON:0001890 ! forebrain

[Term]
id: UBERON:0001894
name: diencephalon
alt_id: UBERON:FMA_62001-MA_0000171-MIAA_0000420-XAO_0000013-ZFA_0000101
def: "Organ component of neuraxis that has as its parts the epithalamus, thalamus, hypothalamus, subthalamus. There is only one diencephalon. // The more posterior and ventral of two forebrain neuromeres, the other being the telencephalon; major derivatives are the eye cups, the brain pretectal region, the thalamus, hypothalamus, and epithalamus (including the habenula and epiphysis). <a href='http://zfin.org/cgi-bin/ZFIN_jump?record=ZDB-PUB-961014-576'>Kimmel et al, 1995.</a>" [Wikipedia:Diencephalon, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Between brain" EXACT []
synonym: "between brain" EXACT []
synonym: "Diencephalon" EXACT []
synonym: "Interbrain" EXACT []
synonym: "interbrain" EXACT []
synonym: "Mature diencephalon" EXACT []
synonym: "mature diencephalon" EXACT []
xref: BTO:0000342
xref: EFO:0000911 ! diencephalon
xref: EHDAA:1969 ! diencephalon
xref: EHDAA:2645 ! diencephalon
xref: EHDAA:3472 ! diencephalon
xref: FMA:62001 ! Diencephalon
xref: GAID:618 ! diencephalon
xref: HOG:0000318 ! diencephalon
xref: MA:0000171 ! diencephalon
xref: MAT:0000420 ! diencephalon
xref: MIAA:0000420 ! diencephalon
xref: NIF_GrossAnatomy:birnlex_1503 ! Diencephalon
xref: TAO:0000101 ! diencephalon
xref: XAO:0000013 ! diencephalon
xref: ZFA:0000101 ! diencephalon
is_a: UBERON:0002780 ! regional part of forebrain
relationship: part_of UBERON:0001890 ! forebrain
xref: ncithesaurus:Diencephalon ! Diencephalon

[Term]
id: UBERON:0001895
name: metencephalon
alt_id: UBERON:FMA_62003-MA_0000197
def: "Rostral segment of the hindbrain that has as its parts the pons and the cerebellum." [Wikipedia:Metencephalon]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Epencephalon-2" EXACT []
synonym: "epencephalon-2" EXACT []
synonym: "Metencephalon" EXACT []
xref: BTO:0000673
xref: EHDAA:5498 ! metencephalon
xref: FMA:62003 ! Metencephalon
xref: GAID:594 ! metencephalon
xref: HOG:0000741 ! metencephalon
xref: MA:0000197 ! metencephalon
xref: NIF_GrossAnatomy:birnlex_965 ! Metencephalon
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0002028 ! hindbrain

[Term]
id: UBERON:0001896
name: medulla oblongata
alt_id: UBERON:FMA_62004-MA_0000206-MIAA_0000111-XAO_0003100-ZFA_0000545
def: "Organ component of neuraxis that has as its parts the medullary reticular formation, inferior olivary complex and cochlear nuclear complex, among other structures. Examples: There is only one medulla oblongata[FMA]. The medulla oblongata lies directly above the spinal cord and controls vital autonomic functions such as digestion, breathing and the control of heart rate[GO]." [FMA:62004, GO:0021550, Wikipedia:Medulla_oblongata]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "brainstem" RELATED []
synonym: "Bulb" EXACT []
synonym: "bulb" EXACT []
synonym: "Medulla oblongata" EXACT []
synonym: "medulla oblonmgata" EXACT []
synonym: "Metepencephalon" EXACT []
synonym: "metepencephalon" EXACT []
xref: BTO:0000041
xref: BTO:0000159
xref: EFO:0000924 ! medulla oblongata
xref: EHDAA:7588 ! medulla oblongata
xref: FMA:62004 ! Medulla oblongata
xref: GAID:590 ! medulla oblongata
xref: HOG:0000181 ! medulla oblongata
xref: MA:0000206 ! medulla oblongata
xref: MAT:0000111 ! medulla oblonmgata
xref: MAT:0000367 ! bulb
xref: MIAA:0000111 ! medulla oblonmgata
xref: NIF_GrossAnatomy:birnlex_957 ! Medulla oblongata
xref: OpenCyc:Mx4rvVjxSJwpEbGdrcN5Y29ycA
xref: TAO:0000545 ! medulla oblongata
xref: XAO:0003100 ! medulla oblongata
xref: ZFA:0000545 ! medulla oblongata
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0002028 ! hindbrain
relationship: part_of UBERON:0002298 ! brainstem
relationship: participates_in_regulation_of GO:0002027
relationship: participates_in_regulation_of GO:0007585
relationship: participates_in_regulation_of GO:0007586
xref: ncithesaurus:Medulla_Oblongata ! Medulla Oblongata

[Term]
id: UBERON:0001897
name: thalamus
alt_id: UBERON:FMA_62007-MA_0000179-MIAA_0000109-ZFA_0001215
def: "." [Wikipedia:Thalamus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Dorsal thalamus" EXACT []
synonym: "dorsal thalamus" EXACT []
synonym: "Dorsal thalamus (Anthoney)" EXACT []
synonym: "dorsal thalamus (anthoney)" EXACT []
synonym: "future thalamus" BROAD []
synonym: "Thalamus" EXACT []
xref: BTO:0001365
xref: EFO:0000910 ! thalamus
xref: FMA:62007 ! Thalamus
xref: GAID:656 ! thalamus
xref: HOG:0000657 ! thalamus
xref: MA:0000179 ! thalamus
xref: MAT:0000109 ! thalamus
xref: MIAA:0000109 ! thalamus
xref: NIF_GrossAnatomy:birnlex_954 ! Thalamus
xref: TAO:0001215 ! thalamus
xref: ZFA:0001215 ! thalamus
is_a: UBERON:0000481 ! multi-tissue structure
relationship: part_of UBERON:0001894 ! diencephalon
xref: ncithesaurus:Thalamus ! Thalamus

[Term]
id: UBERON:0001898
name: hypothalamus
alt_id: UBERON:FMA_62008-MA_0000173-MIAA_0000112-ZFA_0000032
def: "A specialized brain region of the ventral diencephalon arising near the end of the segmentation period; the embryonic hypothalamic region will give rise to the posterior pituitary gland as well as a number of brain nuclei. [ZFA]. One of the most important functions of the hypothalamus is to link the nervous system to the endocrine system via the pituitary gland (hypophysis).[Wikipedia]." [Wikipedia:Hypothalamus, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Hypothalamus" EXACT []
synonym: "Preoptico-hypothalamic area" EXACT []
synonym: "preoptico-hypothalamic area" EXACT []
synonym: "Preoptico-hypothalamic region" EXACT []
synonym: "preoptico-hypothalamic region" EXACT []
xref: BTO:0000614
xref: EFO:0000107 ! hypothalamus
xref: EHDAA:5446 ! hypothalamus
xref: FMA:62008 ! Hypothalamus
xref: GAID:460 ! hypothalamus
xref: galen:Hypothalamus
xref: HOG:0000179 ! hypothalamus
xref: MA:0000173 ! hypothalamus
xref: MAT:0000112 ! hypothalamus
xref: MIAA:0000112 ! hypothalamus
xref: NIF_GrossAnatomy:birnlex_734 ! Hypothalamus
xref: TAO:0000032 ! hypothalamus
xref: ZFA:0000032 ! hypothalamus
is_a: UBERON:0000481 ! multi-tissue structure
relationship: part_of UBERON:0000349 ! limbic system
relationship: part_of UBERON:0001894 ! diencephalon
xref: ncithesaurus:Hypothalamus ! Hypothalamus

[Term]
id: UBERON:0001899
name: epithalamus
alt_id: UBERON:FMA_62009-MA_0000172-MIAA_0000422-ZFA_0000509
def: "The epithalamus is the small dorsomedial area of the thalamus including the habenular nuclei and associated fiber bundles, the pineal body, and the epithelial roof of the third ventricle[GO]." [Wikipedia:Epithalamus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Epithalamus" EXACT []
xref: BTO:0000175
xref: EFO:0000918 ! epithalamus
xref: EHDAA:5433 ! epithalamus
xref: FMA:62009 ! Epithalamus
xref: GAID:455 ! epithalamus
xref: HOG:0000178 ! epithalamus
xref: MA:0000172 ! epithalamus
xref: MAT:0000422 ! epithalamus
xref: MIAA:0000422 ! epithalamus
xref: NIF_GrossAnatomy:birnlex_1710 ! Epithalamus
xref: TAO:0000509 ! epithalamus
xref: ZFA:0000509 ! epithalamus
is_a: UBERON:0000481 ! multi-tissue structure
relationship: part_of UBERON:0001894 ! diencephalon
xref: ncithesaurus:Epithalamus ! Epithalamus

[Term]
id: UBERON:0001900
name: subthalamus
alt_id: UBERON:FMA_62010-MA_0000181-ZFA_0000458
def: "Anterior part of the diencephalon that lies between the thalamus, hypothalamus, and tegmentum of the mesencephalon, including subthalamic nucleus, zona incerta, the fields of Forel, and the nucleus of ansa lenticularis." [GO:0021539, Wikipedia:Subthalamus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "prethalamus" RELATED []
synonym: "Subthalamic region" EXACT []
synonym: "subthalamic region" EXACT []
synonym: "Subthalamus" EXACT []
synonym: "Ventral thalamus" EXACT []
synonym: "ventral thalamus" EXACT []
xref: FMA:62010 ! Subthalamus
xref: GAID:653 ! subthalamus
xref: MA:0000181 ! ventral thalamus
xref: NIF_GrossAnatomy:birnlex_708 ! Subthalamus
xref: TAO:0000458 ! ventral thalamus
xref: ZFA:0000458 ! ventral thalamus
is_a: UBERON:0000481 ! multi-tissue structure
relationship: part_of UBERON:0001897 ! thalamus
xref: ncithesaurus:Ventral_Thalamus ! Ventral Thalamus

[Term]
id: UBERON:0001901
name: epithelium of trachea
alt_id: UBERON:FMA_62015-MA_0001862
alt_id: UBERON:0003227
comment: This class was created automatically from a combination of ontologies
synonym: "Epithelium of trachea" EXACT []
synonym: "trachea epithelium" EXACT []
synonym: "Tracheal epithelium" EXACT []
synonym: "tracheal epithelium" EXACT []
xref: BTO:0001389
xref: FMA:62015 ! Epithelium of trachea
xref: HOG:0001045 ! trachea epithelium
xref: MA:0001862 ! trachea epithelium
xref: EHDAA:5007 ! epithelium
is_a: UBERON:0000485 ! simple columnar epithelium
intersection_of: UBERON:0000483 ! epithelium
intersection_of: part_of UBERON:0001005 ! trachea
relationship: part_of UBERON:0001005 ! trachea
xref: ncithesaurus:Tracheal_Epithelium ! Tracheal Epithelium

[Term]
id: UBERON:0001902
name: epithelium of small intestine
alt_id: UBERON:FMA_62017-MA_0001553
comment: This class was created automatically from a combination of ontologies
synonym: "Epithelium of small intestine" EXACT []
synonym: "Small intestinal epithelium" EXACT []
synonym: "small intestinal epithelium" EXACT []
synonym: "small intestine epithelium" EXACT []
xref: BTO:0001258
xref: FMA:62017 ! Epithelium of small intestine
xref: MA:0001553 ! small intestine epithelium
xref: ZFA:0005127 ! mid intestine epithelium
is_a: UBERON:0001277 ! intestinal epithelium
intersection_of: UBERON:0000483 ! epithelium
intersection_of: part_of UBERON:0002108 ! small intestine
relationship: part_of UBERON:0001204 ! mucosa of small intestine

[Term]
id: UBERON:0001903
name: thalamic reticular nucleus
alt_id: UBERON:FMA_62026-MA_0000876
def: "." [Wikipedia:Thalamic_reticular_nucleus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Reticular nuclear group" EXACT []
synonym: "reticular nuclear group" EXACT []
synonym: "Reticular nucleus of thalamus" EXACT []
synonym: "reticular nucleus of thalamus" EXACT []
synonym: "Reticular nucleus of the thalamus" EXACT []
synonym: "reticular nucleus of the thalamus" EXACT []
synonym: "Reticular nucleus-2" EXACT []
synonym: "reticular nucleus-2" EXACT []
synonym: "Reticular thalamic nucleus" EXACT []
synonym: "reticular thalamic nucleus" EXACT []
synonym: "Thalamic reticular nucleus" EXACT []
xref: FMA:62026 ! Thalamic reticular nucleus
xref: MA:0000876 ! reticular thalamic nucleus
xref: NIF_GrossAnatomy:birnlex_1721 ! Thalamic reticular nucleus
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0001900 ! subthalamus

[Term]
id: UBERON:0001904
name: habenula
alt_id: UBERON:FMA_62032-MA_0000830-ZFA_0000213
def: "Habenula is an segment of the epithalamus that has as its parts the lateral and medial habenular nuclei and the habenular commissure. // The habenula relays impulses from limbic areas of the telencephalon to an unpaired midbrain nucleus, the interpeduncular nucleus." [Wikipedia:Habenula, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Habenula" EXACT []
synonym: "habenulae" RELATED []
synonym: "Habenular nuclei" EXACT []
synonym: "habenular nuclei" EXACT []
synonym: "habenular nucleus" RELATED []
xref: FMA:62032 ! Habenula
xref: GAID:619 ! habenula
xref: MA:0000830 ! habenula
xref: NIF_GrossAnatomy:birnlex_1611 ! Habenula
xref: TAO:0000213 ! habenula
xref: ZFA:0000213 ! habenula
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001899 ! epithalamus
xref: BTO:0003684 ! habenula

[Term]
id: UBERON:0001905
name: pineal body
alt_id: UBERON:FMA_62033-MA_0000175-XAO_0000160
def: "Pineal body is an unpaired glandular organ subdivision shaped somewhat like a pine cone. It is attached on the midline near the posterior and habenular commissures of the epithalamus." [Wikipedia:Pineal_body]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "corpus pineale" RELATED []
synonym: "epiphysis" RELATED [ZFA:0000019]
synonym: "epiphysis cerebri" RELATED [Wikipedia:Epiphysis_cerebri]
synonym: "Pineal body" EXACT []
synonym: "Pineal gland" EXACT []
synonym: "pineal gland" EXACT []
xref: BTO:0001067
xref: EFO:0000865 ! pineal gland
xref: EHDAA:7523 ! pineal gland
xref: FMA:62033 ! Pineal body
xref: GAID:453 ! pineal gland
xref: HOG:0000051 ! pineal gland
xref: MA:0000175 ! pineal gland
xref: MAT:0000448 ! pineal gland
xref: ncithesaurus:Pineal_Gland
xref: NIF_GrossAnatomy:birnlex_1184 ! Pineal body
xref: OpenCyc:Mx4rv2FMGpwpEbGdrcN5Y29ycA
xref: XAO:0000160 ! pineal gland
xref: ZFA:0000019 ! epiphysis
is_a: UBERON:0002530 ! gland
relationship: part_of UBERON:0000949 ! endocrine system
relationship: part_of UBERON:0001891 ! midbrain
relationship: part_of UBERON:0001899 ! epithalamus

[Term]
id: UBERON:0001906
name: subthalamic nucleus
alt_id: UBERON:FMA_62035-MA_0000877
def: "The subthalamic nucleus is the lens-shaped nucleus located in the ventral part of the subthalamus on the inner aspect of the internal capsule that is concerned with the integration of somatic motor function[GO]." [Wikipedia:Subthalamic_nucleus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Body of Forel" EXACT []
synonym: "body of forel" EXACT []
synonym: "Body of Luys" EXACT []
synonym: "body of luys" EXACT []
synonym: "Nucleus of Corpus Luysii" EXACT []
synonym: "nucleus of corpus luysii" EXACT []
synonym: "Nucleus of Luys" EXACT []
synonym: "nucleus of luys" EXACT []
synonym: "Subthalamic nucleus" EXACT []
synonym: "Subthalamic nucleus (of Luys)" EXACT []
synonym: "subthalamic nucleus (of luys)" EXACT []
xref: FMA:62035 ! Subthalamic nucleus
xref: GAID:655 ! subthalamic nucleu
xref: MA:0000877 ! subthalamic nucleus
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0001900 ! subthalamus
xref: ncithesaurus:Subthalamic_Nucleus ! Subthalamic Nucleus
xref: BTO:0002252 ! subthalamic nucleus

[Term]
id: UBERON:0001907
name: zona incerta
alt_id: UBERON:FMA_62038-MA_0000878
def: "." [Wikipedia:Zona_incerta]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Zona incerta" EXACT []
xref: FMA:62038 ! Zona incerta
xref: MA:0000878 ! zona incerta
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0001900 ! subthalamus
xref: BTO:0003146 ! zona incerta

[Term]
id: UBERON:0001908
name: optic tract
alt_id: UBERON:FMA_62046-ZFA_0000252
def: "Nerve trunk which is continuous with the optic chiasm and the lateral geniculate nucleus. // Axon tract which is comprised of retinal ganglion cell axons after which they have passed through the optic chiasm." [Wikipedia:Optic_tract, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Optic lemniscus" EXACT []
synonym: "optic lemniscus" EXACT []
synonym: "Optic tract" EXACT []
xref: FMA:62046 ! Optic tract
xref: HOG:0001164 ! optic tract
xref: MA:0001099 ! optic tract
xref: NIF_GrossAnatomy:birnlex_1684 ! Optic tract
xref: TAO:0000252 ! optic tract
xref: ZFA:0000252 ! optic tract
is_a: UBERON:0000481 ! multi-tissue structure
intersection_of: UBERON:0001018 ! axon tract
intersection_of: part_of UBERON:0000970 ! eye
relationship: continuous_with UBERON:0000959 ! optic chiasma
relationship: part_of UBERON:0001894 ! diencephalon
xref: ncithesaurus:Optic_Tract ! Optic Tract

[Term]
id: UBERON:0001909
name: habenular commissure
alt_id: UBERON:FMA_62048-ZFA_0000359
def: "." [Wikipedia:Habenular_commissure]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Habenular commissure" EXACT []
xref: FMA:62048 ! Habenular commissure
xref: NIF_GrossAnatomy:birnlex_1609 ! Habenular commissure
xref: TAO:0000359 ! habenular commissure
xref: ZFA:0000359 ! habenular commissure
is_a: UBERON:0000481 ! multi-tissue structure
relationship: part_of UBERON:0001904 ! habenula

[Term]
id: UBERON:0001910
name: medial forebrain bundle
alt_id: UBERON:FMA_62064-ZFA_0005111
def: "." [Wikipedia:Medial_forebrain_bundle]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Medial forebrain bundle" EXACT []
synonym: "Medial forebrain fasciculus" EXACT []
synonym: "medial forebrain fasciculus" EXACT []
synonym: "Telencephalic medial fasciculus" EXACT []
synonym: "telencephalic medial fasciculus" EXACT []
xref: FMA:62064 ! Medial forebrain bundle
xref: GAID:736 ! medial forebrain bundle
xref: NIF_GrossAnatomy:birnlex_908 ! Medial forebrain bundle
xref: TAO:0005111 ! medial forebrain bundle
xref: ZFA:0005111 ! medial forebrain bundle
is_a: UBERON:0000481 ! multi-tissue structure
relationship: part_of UBERON:0000955 ! brain
xref: ncithesaurus:Medial_Forebrain_Bundle ! Medial Forebrain Bundle

[Term]
id: UBERON:0001911
name: lactiferous gland
alt_id: UBERON:FMA_62088-MA_0000145-MIAA_0000073-Mammary
def: "Lobular organ which consist of a lactiferous duct tree and the set of lactiferous acini that are connected to duct tree. Examples: There are variable numbers of lactiferous duct trees." [Wikipedia:Mammary_gland]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Lactiferous gland" EXACT []
synonym: "Lobe of breast" EXACT []
synonym: "lobe of breast" EXACT []
synonym: "Lobe of mammary gland" EXACT []
synonym: "lobe of mammary gland" EXACT []
synonym: "mammary gland" EXACT []
xref: BTO:0000817
xref: EFO:0000854 ! mammary gland
xref: EHDAA:6524 ! mammary gland
xref: FMA:62088 ! Lactiferous gland
xref: HOG:0000398 ! mammary gland
xref: MA:0000145 ! mammary gland
xref: MAT:0000073 ! mammary gland
xref: MIAA:0000073 ! mammary gland
xref: ncithesaurus:Mammary_Gland
xref: NULL:Mammary
xref: OpenCyc:Mx4rvVjVq5wpEbGdrcN5Y29ycA
is_a: UBERON:0002530 ! gland
relationship: part_of UBERON:0000477 ! anatomical cluster

[Term]
id: UBERON:0001912
name: lobule of lactiferous gland
alt_id: UBERON:FMA_62090-MA_0000793
def: "Organ component of the mammary gland which consists of an aggregate of mammary alveoli that communicate with a lobular lactiferous duct." []
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Acinus of mammary gland" EXACT []
synonym: "acinus of mammary gland" EXACT []
synonym: "Lactiferous acinus" EXACT []
synonym: "lactiferous acinus" EXACT []
synonym: "Lactiferous gland lobule" EXACT []
synonym: "lactiferous gland lobule" EXACT []
synonym: "Lactiferous lobule" EXACT []
synonym: "lactiferous lobule" EXACT []
synonym: "Lobule of lactiferous gland" EXACT []
synonym: "Lobule of mammary gland" EXACT []
synonym: "lobule of mammary gland" EXACT []
synonym: "Mammary acinus" EXACT []
synonym: "mammary acinus" EXACT []
synonym: "mammary gland lobule" EXACT []
xref: FMA:62090 ! Lobule of lactiferous gland
xref: MA:0000793 ! mammary gland lobule
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001911 ! lactiferous gland

[Term]
id: UBERON:0001913
name: milk
alt_id: UBERON:FMA_62100-MA_0002552-MIAA_0000056
def: "Secretion produced by the mammary gland." [Wikipedia:Breast_milk]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "mammary gland milk" EXACT []
synonym: "Milk" EXACT []
xref: BTO:0000868
xref: ENVO:02000031
xref: FMA:62100 ! Milk
xref: GAID:1230 ! milk
xref: HOG:0001263 ! milk
xref: MA:0002552 ! mammary gland milk
xref: MAT:0000056 ! milk
xref: MIAA:0000056 ! milk
xref: OpenCyc:Mx4rvVjGZJwpEbGdrcN5Y29ycA
is_a: UBERON:0000463 ! portion of organism substance
xref: ncithesaurus:Milk ! Milk

[Term]
id: UBERON:0001914
name: colostrum
alt_id: UBERON:FMA_62101-MA_0002551
def: "." [Wikipedia:Colostrum]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Colostrum" EXACT []
xref: BTO:0000276
xref: FMA:62101 ! Colostrum
xref: GAID:1159 ! colostrum
xref: MA:0002551 ! colostrum
is_a: UBERON:0001913 ! milk
xref: ncithesaurus:Colostrum ! Colostrum

[Term]
id: UBERON:0001915
name: endothelium of capillary
alt_id: UBERON:FMA_62114-MA_0000711
comment: This class was created automatically from a combination of ontologies
synonym: "Capillary endothelium" EXACT []
synonym: "capillary endothelium" EXACT []
synonym: "Endothelium of capillary" EXACT []
xref: FMA:62114 ! Endothelium of capillary
xref: MA:0000711 ! capillary endothelium
is_a: UBERON:0001986 ! endothelium
intersection_of: UBERON:0001986 ! endothelium
intersection_of: part_of UBERON:0001982 ! capillary
relationship: part_of UBERON:0001982 ! capillary
xref: ncithesaurus:Capillary_Endothelium ! Capillary Endothelium

[Term]
id: UBERON:0001916
name: endothelium of arteriole
alt_id: UBERON:FMA_62115-MA_0000705
comment: This class was created automatically from a combination of ontologies
synonym: "Arteriole endothelium" EXACT []
synonym: "arteriole endothelium" EXACT []
synonym: "Endothelium of arteriole" EXACT []
xref: FMA:62115 ! Endothelium of arteriole
xref: MA:0000705 ! arteriole endothelium
is_a: UBERON:0001986 ! endothelium
intersection_of: UBERON:0001986 ! endothelium
intersection_of: part_of UBERON:0001980 ! arteriole
relationship: part_of UBERON:0001980 ! arteriole
xref: ncithesaurus:Arteriole_Endothelium ! Arteriole Endothelium

[Term]
id: UBERON:0001917
name: endothelium of artery
alt_id: UBERON:FMA_62116-MA_0000707-XAO_0000357
comment: This class was created automatically from a combination of ontologies
synonym: "Arterial endothelium" EXACT []
synonym: "arterial endothelium" EXACT []
synonym: "artery endothelium" EXACT []
synonym: "Endothelium of artery" EXACT []
xref: FMA:62116 ! Endothelium of artery
xref: HOG:0001215 ! arterial endothelium
xref: MA:0000707 ! artery endothelium
xref: XAO:0000357 ! arterial endothelium
is_a: UBERON:0001986 ! endothelium
intersection_of: UBERON:0001986 ! endothelium
intersection_of: part_of UBERON:0001637 ! artery
relationship: part_of UBERON:0001637 ! artery
xref: ncithesaurus:Artery_Endothelium ! Artery Endothelium

[Term]
id: UBERON:0001918
name: endothelium of venule
alt_id: UBERON:FMA_62117-MA_0000716
comment: This class was created automatically from a combination of ontologies
synonym: "Endothelium of venule" EXACT []
synonym: "Venule endothelium" EXACT []
synonym: "venule endothelium" EXACT []
xref: FMA:62117 ! Endothelium of venule
xref: MA:0000716 ! venule endothelium
is_a: UBERON:0001986 ! endothelium
intersection_of: UBERON:0001986 ! endothelium
intersection_of: part_of UBERON:0001979 ! venule
relationship: part_of UBERON:0001979 ! venule
xref: ncithesaurus:Venule_Endothelium ! Venule Endothelium

[Term]
id: UBERON:0001919
name: endothelium of vein
alt_id: UBERON:FMA_62118-MA_0000712
comment: This class was created automatically from a combination of ontologies
synonym: "Endothelium of vein" EXACT []
synonym: "vein endothelium" EXACT []
synonym: "Venous endothelium" EXACT []
synonym: "venous endothelium" EXACT []
xref: FMA:62118 ! Endothelium of vein
xref: HOG:0001216 ! venous endothelium
xref: MA:0000712 ! vein endothelium
is_a: UBERON:0001986 ! endothelium
intersection_of: UBERON:0001986 ! endothelium
intersection_of: part_of UBERON:0001638 ! vein
xref: ncithesaurus:Vein_Endothelium ! Vein Endothelium

[Term]
id: UBERON:0001920
name: paraventricular nucleus of thalamus
alt_id: UBERON:FMA_62152-MA_0000866
def: "." [Wikipedia:Paraventricular_nuclei]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Paraventricular gray" EXACT []
synonym: "paraventricular gray" EXACT []
synonym: "Paraventricular nuclei" EXACT []
synonym: "paraventricular nuclei" EXACT []
synonym: "Paraventricular nuclei of thalamus" EXACT []
synonym: "paraventricular nuclei of thalamus" EXACT []
synonym: "Paraventricular nucleus of thalamus" EXACT []
synonym: "Paraventricular thalamic nucleus" EXACT []
synonym: "paraventricular thalamic nucleus" EXACT []
xref: FMA:62152 ! Paraventricular nucleus of thalamus
xref: MA:0000866 ! paraventricular thalamic nucleus
xref: NIF_GrossAnatomy:birnlex_764 ! Paraventricular nucleus of thalamus
is_a: UBERON:0001930 ! paraventricular nucleus of hypothalamus
intersection_of: UBERON:0001930 ! paraventricular nucleus of hypothalamus
intersection_of: part_of UBERON:0001897 ! thalamus

[Term]
id: UBERON:0001921
name: reuniens nucleus
alt_id: UBERON:FMA_62153-MA_0000865
comment: This class was created automatically from a combination of ontologies
synonym: "Medioventral nucleus" EXACT []
synonym: "medioventral nucleus" EXACT []
synonym: "nucleus reuniens" EXACT []
synonym: "Reuniens nucleus" EXACT []
synonym: "Reuniens thalamic nucleus" EXACT []
synonym: "reuniens thalamic nucleus" EXACT []
xref: FMA:62153 ! Reuniens nucleus
xref: MA:0000865 ! nucleus reuniens
xref: NIF_GrossAnatomy:birnlex_770 ! Reuniens nucleus
is_a: UBERON:0002308 ! nucleus of brain
xref: BTO:0002459 ! nucleus reuniens

[Term]
id: UBERON:0001922
name: parafascicular nucleus
alt_id: UBERON:FMA_62166-MA_0000874
comment: This class was created automatically from a combination of ontologies
synonym: "Parafascicular nucleus" EXACT []
synonym: "Parafascicular nucleus of thalamus" EXACT []
synonym: "parafascicular nucleus of thalamus" EXACT []
synonym: "Parafascicular thalamic nucleus" EXACT []
synonym: "parafascicular thalamic nucleus" EXACT []
xref: FMA:62166 ! Parafascicular nucleus
xref: MA:0000874 ! parafascicular nucleus
xref: NIF_GrossAnatomy:birnlex_952 ! Parafascicular nucleus
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0001923
name: central medial nucleus
alt_id: UBERON:FMA_62171-MA_0000872
comment: This class was created automatically from a combination of ontologies
synonym: "Central medial nucleus" EXACT []
synonym: "Central medial nucleus of thalamus" EXACT []
synonym: "central medial nucleus of thalamus" EXACT []
synonym: "Central medial thalamic nucleus" EXACT []
synonym: "central medial thalamic nucleus" EXACT []
xref: FMA:62171 ! Central medial nucleus
xref: MA:0000872 ! central medial nucleus
xref: NIF_GrossAnatomy:birnlex_971 ! Central medial nucleus
is_a: UBERON:0002308 ! nucleus of brain
xref: BTO:0003753 ! central medial thalamic nucleus

[Term]
id: UBERON:0001924
name: paracentral nucleus
alt_id: UBERON:FMA_62172-MA_0000873
comment: This class was created automatically from a combination of ontologies
synonym: "Paracentral nucleus" EXACT []
synonym: "Paracentral nucleus of thalamus" EXACT []
synonym: "paracentral nucleus of thalamus" EXACT []
synonym: "Paracentral thalamic nucleus" EXACT []
synonym: "paracentral thalamic nucleus" EXACT []
xref: FMA:62172 ! Paracentral nucleus
xref: MA:0000873 ! paracentral nucleus
xref: NIF_GrossAnatomy:birnlex_981 ! Paracentral nucleus
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0001925
name: ventral lateral nucleus
alt_id: UBERON:FMA_62186-ZFA_0000306
def: "." [Wikipedia:Ventral_lateral_nucleus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Lateral ventral nucleus of thalamus" EXACT []
synonym: "lateral ventral nucleus of thalamus" EXACT []
synonym: "Ventral lateral complex of thalamus" EXACT []
synonym: "ventral lateral complex of thalamus" EXACT []
synonym: "Ventral lateral nucleus" EXACT []
synonym: "Ventral lateral nucleus of thalamus" EXACT []
synonym: "ventral lateral nucleus of thalamus" EXACT []
synonym: "Ventral lateral thalamic nuclei" EXACT []
synonym: "ventral lateral thalamic nuclei" EXACT []
synonym: "Ventrolateral thalamic nucleus" EXACT []
synonym: "ventrolateral thalamic nucleus" EXACT []
xref: FMA:62186 ! Ventral lateral nucleus
xref: NIF_GrossAnatomy:birnlex_1237 ! Ventral lateral nucleus
xref: TAO:0000306 ! ventrolateral thalamic nucleus
xref: ZFA:0000306 ! ventrolateral thalamic nucleus
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0001900 ! subthalamus
xref: BTO:0002463 ! ventral lateral complex of thalamus

[Term]
id: UBERON:0001926
name: lateral geniculate body
alt_id: UBERON:FMA_62209-MA_0000869
def: "The lateral geniculate nucleus is the primary processor of visual information received from the retina[GO]." [Wikipedia:Lateral_geniculate_body]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Lateral geniculate body" EXACT []
synonym: "Lateral geniculate complex" EXACT []
synonym: "lateral geniculate complex" EXACT []
synonym: "Lateral geniculate nucleus" EXACT []
synonym: "lateral geniculate nucleus" EXACT []
xref: FMA:62209 ! Lateral geniculate body
xref: MA:0000869 ! lateral geniculate nucleus
xref: NIF_GrossAnatomy:birnlex_1662 ! Lateral geniculate body
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001897 ! thalamus

[Term]
id: UBERON:0001927
name: medial geniculate body
alt_id: UBERON:FMA_62211-MA_0000870
def: "." [Wikipedia:Medial_geniculate_body]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Medial geniculate body" EXACT []
synonym: "Medial geniculate complex" EXACT []
synonym: "medial geniculate complex" EXACT []
synonym: "Medial geniculate nuclei" EXACT []
synonym: "medial geniculate nuclei" EXACT []
synonym: "Medial geniculate nucleus" EXACT []
synonym: "medial geniculate nucleus" EXACT []
xref: FMA:62211 ! Medial geniculate body
xref: MA:0000870 ! medial geniculate nucleus
xref: NIF_GrossAnatomy:birnlex_1670 ! Medial geniculate body
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001016 ! nervous system
xref: BTO:0002674 ! medial geniculate body

[Term]
id: UBERON:0001928
name: preoptic area
alt_id: UBERON:FMA_62313-ZFA_0000470
def: "Area of the forebrain anterior to the posterior tuberculum and the hypothalamus and ventral to the ventral thalamus. See Figure 7, Atlas of Early Zebrafish Brain Development." [Wikipedia:Preoptic_area, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "area praeoptica" RELATED []
synonym: "area preoptica" RELATED []
synonym: "Preoptic area" EXACT []
synonym: "Preoptic nuclei" EXACT []
synonym: "preoptic nuclei" EXACT []
synonym: "preoptic region" RELATED []
synonym: "Preoptic region of hypothalamus" EXACT []
synonym: "preoptic region of hypothalamus" EXACT []
xref: FMA:62313 ! Preoptic area
xref: GAID:644 ! preoptic area
xref: NIF_GrossAnatomy:birnlex_1706 ! Preoptic area
xref: TAO:0000470 ! preoptic area
xref: ZFA:0000470 ! preoptic area
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001894 ! diencephalon
xref: BTO:0001796 ! preoptic area

[Term]
id: UBERON:0001929
name: supraoptic nucleus
alt_id: UBERON:FMA_62317-MA_0000849
def: "." [Wikipedia:Supraoptic_nucleus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Supra-optic nucleus" EXACT []
synonym: "supra-optic nucleus" EXACT []
synonym: "Supraoptic nucleus" EXACT []
synonym: "Supraoptic nucleus of hypothalamus" EXACT []
synonym: "supraoptic nucleus of hypothalamus" EXACT []
xref: FMA:62317 ! Supraoptic nucleus
xref: GAID:646 ! supraoptic nucleu
xref: MA:0000849 ! supraoptic nucleus
xref: NIF_GrossAnatomy:birnlex_1411 ! Supraoptic nucleus
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0002271 ! periventricular zone of hypothalamus
xref: BTO:0002697 ! supraoptic nucleus

[Term]
id: UBERON:0001930
name: paraventricular nucleus of hypothalamus
alt_id: UBERON:FMA_62320-MA_0000848
def: "." [Wikipedia:Paraventricular_nucleus_of_hypothalamus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Filiform nucleus" EXACT []
synonym: "filiform nucleus" EXACT []
synonym: "Paraventricular hypothalamic nucleus" EXACT []
synonym: "paraventricular hypothalamic nucleus" EXACT []
synonym: "Paraventricular nucleus" EXACT []
synonym: "paraventricular nucleus" EXACT []
synonym: "Paraventricular nucleus of hypothalamus" EXACT []
xref: FMA:62320 ! Paraventricular nucleus of hypothalamus
xref: GAID:643 ! paraventricular hypothalamic nucleu
xref: MA:0000848 ! paraventricular hypothalamic nucleus
xref: NIF_GrossAnatomy:birnlex_1407 ! Paraventricular nucleus of hypothalamus
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0002271 ! periventricular zone of hypothalamus
xref: BTO:0002476 ! paraventricular nucleus of hypothalamus

[Term]
id: UBERON:0001931
name: lateral preoptic nucleus
alt_id: UBERON:FMA_62326-MA_0000835
def: "." [Wikipedia:Lateral_preoptic_nucleus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Lateral preoptic area" EXACT []
synonym: "lateral preoptic area" EXACT []
synonym: "Lateral preoptic hypothalamic nucleus" EXACT []
synonym: "lateral preoptic hypothalamic nucleus" EXACT []
synonym: "Lateral preoptic nucleus" EXACT []
xref: FMA:62326 ! Lateral preoptic nucleus
xref: MA:0000835 ! lateral preoptic area
xref: NIF_GrossAnatomy:birnlex_1722 ! Lateral preoptic nucleus
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0002273 ! lateral zone of hypothalamus

[Term]
id: UBERON:0001932
name: arcuate nucleus of hypothalamus
alt_id: UBERON:FMA_62329-MA_0000847
def: "." [Wikipedia:Arcuate_nucleus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Arcuate hypothalamic nucleus" EXACT []
synonym: "arcuate hypothalamic nucleus" EXACT []
synonym: "Arcuate nucleus" EXACT []
synonym: "arcuate nucleus" EXACT []
synonym: "Arcuate nucleus of hypothalamus" EXACT []
synonym: "Arcuate nucleus-2" EXACT []
synonym: "arcuate nucleus-2" EXACT []
synonym: "Arcuate periventricular nucleus" EXACT []
synonym: "arcuate periventricular nucleus" EXACT []
synonym: "Infundibular hypothalamic nucleus" EXACT []
synonym: "infundibular hypothalamic nucleus" EXACT []
synonym: "Infundibular nucleus" EXACT []
synonym: "infundibular nucleus" EXACT []
synonym: "Infundibular periventricular nucleus" EXACT []
synonym: "infundibular periventricular nucleus" EXACT []
xref: FMA:62329 ! Arcuate nucleus of hypothalamus
xref: GAID:647 ! arcuate nucleu
xref: MA:0000847 ! arcuate nucleus
xref: NIF_GrossAnatomy:birnlex_1638 ! Arcuate nucleus of hypothalamus
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0002271 ! periventricular zone of hypothalamus
xref: ncithesaurus:Arcuate_Nucleus ! Arcuate Nucleus
xref: BTO:0002473 ! infundibular nucleus

[Term]
id: UBERON:0001933
name: retrochiasmatic area
alt_id: UBERON:FMA_62330-MA_0000841
comment: This class was created automatically from a combination of ontologies
synonym: "Retrochiasmatic area" EXACT []
synonym: "Retrochiasmatic region" EXACT []
synonym: "retrochiasmatic region" EXACT []
xref: FMA:62330 ! Retrochiasmatic area
xref: MA:0000841 ! retrochiasmatic area
xref: NIF_GrossAnatomy:birnlex_1569 ! Retrochiasmatic area
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0002272 ! medial zone of hypothalamus

[Term]
id: UBERON:0001934
name: dorsomedial nucleus of hypothalamus
alt_id: UBERON:FMA_62331-MA_0000838
def: "." [Wikipedia:Dorsomedial_hypothalamic_nucleus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Dorsomedial hypothalamic nucleus" EXACT []
synonym: "dorsomedial hypothalamic nucleus" EXACT []
synonym: "Dorsomedial nucleus of dorsal hypothalamus" EXACT []
synonym: "dorsomedial nucleus of dorsal hypothalamus" EXACT []
synonym: "Dorsomedial nucleus of hypothalamus" EXACT []
synonym: "Dorsomedial nucleus of intermediate hypothalamus" EXACT []
synonym: "dorsomedial nucleus of intermediate hypothalamus" EXACT []
xref: FMA:62331 ! Dorsomedial nucleus of hypothalamus
xref: GAID:648 ! dorsomedial hypothalamic nucleu
xref: MA:0000838 ! dorsomedial hypothalamic nucleus
xref: NIF_GrossAnatomy:birnlex_1558 ! Dorsomedial nucleus of hypothalamus
intersection_of: UBERON:0002739 ! medial dorsal nucleus
intersection_of: part_of UBERON:0001898 ! hypothalamus
relationship: part_of UBERON:0002272 ! medial zone of hypothalamus
xref: BTO:0002474 ! dorsomedial nucleus of intermediate hypothalamus

[Term]
id: UBERON:0001935
name: ventromedial nucleus of hypothalamus
alt_id: UBERON:FMA_62332-MA_0000845
def: "." [Wikipedia:Ventromedial_hypothalamic_nucleus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Ventromedial hypothalamic nucleus" EXACT []
synonym: "ventromedial hypothalamic nucleus" EXACT []
synonym: "Ventromedial nucleus of hypothalamus" EXACT []
xref: FMA:62332 ! Ventromedial nucleus of hypothalamus
xref: GAID:650 ! ventromedial hypothalamic nucleu
xref: MA:0000845 ! ventromedial hypothalamic nucleus
xref: NIF_GrossAnatomy:birnlex_1572 ! Ventromedial nucleus of hypothalamus
is_a: UBERON:0002308 ! nucleus of brain
xref: BTO:0002472 ! ventromedial hypothalamic nucleus

[Term]
id: UBERON:0001936
name: tuberomammillary nucleus
alt_id: UBERON:FMA_62335-MA_0000853
def: "." [Wikipedia:Tuberomammillary_nucleus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Caudal magnocellular nucleus" EXACT []
synonym: "caudal magnocellular nucleus" EXACT []
synonym: "Mammilloinfundibular nucleus" EXACT []
synonym: "mammilloinfundibular nucleus" EXACT []
synonym: "Tuberomammillary hypothalamic nucleus" EXACT []
synonym: "tuberomammillary hypothalamic nucleus" EXACT []
synonym: "Tuberomammillary nucleus" EXACT []
xref: FMA:62335 ! Tuberomammillary nucleus
xref: MA:0000853 ! tuberomammillary nucleus
xref: NIF_GrossAnatomy:birnlex_1271 ! Tuberomammillary nucleus
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0002206 ! mammillary body

[Term]
id: UBERON:0001937
name: lateral hypothalamic nucleus
alt_id: UBERON:FMA_62337-ZFA_0000227
def: "." [Wikipedia:Lateral_hypothalamic_nucleus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Lateral hypothalamic nucleus" EXACT []
xref: FMA:62337 ! Lateral hypothalamic nucleus
xref: NIF_GrossAnatomy:birnlex_1199 ! Lateral hypothalamic nucleus
xref: TAO:0000227 ! lateral hypothalamic nucleus
xref: ZFA:0000227 ! lateral hypothalamic nucleus
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0001938
name: lateral mammillary nucleus
alt_id: UBERON:FMA_62341-MA_0000850
comment: This class was created automatically from a combination of ontologies
synonym: "Lateral mammillary hypothalamic nucleus" EXACT []
synonym: "lateral mammillary hypothalamic nucleus" EXACT []
synonym: "Lateral mammillary nucleus" EXACT []
synonym: "Lateral nucleus of mammillary body" EXACT []
synonym: "lateral nucleus of mammillary body" EXACT []
xref: FMA:62341 ! Lateral mammillary nucleus
xref: MA:0000850 ! lateral mammillary nucleus
xref: NIF_GrossAnatomy:birnlex_1460 ! Lateral mammillary nucleus
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0002206 ! mammillary body

[Term]
id: UBERON:0001939
name: medial mammillary nucleus
alt_id: UBERON:FMA_62342-MA_0000851
comment: This class was created automatically from a combination of ontologies
synonym: "Internal mammillary nucleus" EXACT []
synonym: "internal mammillary nucleus" EXACT []
synonym: "Medial mammillary nucleus" EXACT []
synonym: "Medial nucleus of mammillary body" EXACT []
synonym: "medial nucleus of mammillary body" EXACT []
xref: FMA:62342 ! Medial mammillary nucleus
xref: MA:0000851 ! medial mammillary nucleus
xref: NIF_GrossAnatomy:birnlex_1299 ! Medial mammillary nucleus
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0002206 ! mammillary body

[Term]
id: UBERON:0001940
name: supramammillary nucleus
alt_id: UBERON:FMA_62347-MA_0000852
comment: This class was created automatically from a combination of ontologies
synonym: "Supramammillary nucleus" EXACT []
xref: FMA:62347 ! Supramammillary nucleus
xref: MA:0000852 ! supramammillary nucleus
xref: NIF_GrossAnatomy:birnlex_1479 ! Supramammillary nucleus
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0002206 ! mammillary body

[Term]
id: UBERON:0001941
name: lateral habenular nucleus
alt_id: UBERON:FMA_62372-MA_0000831
comment: This class was created automatically from a combination of ontologies
synonym: "Lateral habenula" EXACT []
synonym: "lateral habenula" EXACT []
synonym: "Lateral habenular nucleus" EXACT []
xref: FMA:62372 ! Lateral habenular nucleus
xref: MA:0000831 ! lateral habenular nucleus
xref: NIF_GrossAnatomy:birnlex_1438 ! Lateral habenular nucleus
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0001904 ! habenula
xref: BTO:0002699 ! lateral habenular nucleus

[Term]
id: UBERON:0001942
name: medial habenular nucleus
alt_id: UBERON:FMA_62373-MA_0000832
comment: This class was created automatically from a combination of ontologies
synonym: "Medial habenula" EXACT []
synonym: "medial habenula" EXACT []
synonym: "Medial habenular nucleus" EXACT []
xref: FMA:62373 ! Medial habenular nucleus
xref: MA:0000832 ! medial habenular nucleus
xref: NIF_GrossAnatomy:birnlex_1431 ! Medial habenular nucleus
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0001904 ! habenula
xref: BTO:0003686 ! medial habenular nucleus

[Term]
id: UBERON:0001943
name: midbrain tegmentum
alt_id: UBERON:FMA_62393-MA_0000212-ZFA_0001354
def: "Subdivision of the midbrain lying anterior to the tectum and posterior to the substantia nigra and cerebral peduncle." [Wikipedia:Midbrain_tegmentum]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Mesencephalic tegmentum" EXACT []
synonym: "mesencephalic tegmentum" EXACT []
synonym: "Midbrain tegmentum" EXACT []
synonym: "tegmentum" EXACT []
synonym: "Tegmentum of midbrain" EXACT []
synonym: "tegmentum of midbrain" EXACT []
xref: EFO:0000921 ! tegmentum
xref: FMA:62393 ! Midbrain tegmentum
xref: HOG:0001367 ! tegmentum
xref: MA:0000212 ! tegmentum
xref: MAT:0000452 ! tegmentum
xref: NIF_GrossAnatomy:birnlex_1031 ! Tegmentum
xref: NIF_GrossAnatomy:birnlex_1200 ! Midbrain tegmentum
xref: TAO:0001354 ! mesencephalic tegmentum
xref: ZFA:0000160 ! tegmentum
xref: ZFA:0001354
is_a: UBERON:0002950 ! regional part of midbrain
relationship: part_of UBERON:0001891 ! midbrain
xref: BTO:0003388 ! tegmentum

[Term]
id: UBERON:0001944
name: pretectal region
alt_id: UBERON:FMA_62402-MA_0001062-ZFA_0000418
def: "." [Wikipedia:Pretectum]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Pretectal area" EXACT []
synonym: "pretectal area" EXACT []
synonym: "Pretectal nuclei" EXACT []
synonym: "pretectal nuclei" EXACT []
synonym: "Pretectal region" EXACT []
synonym: "Pretectum" EXACT []
synonym: "pretectum" EXACT []
xref: FMA:62402 ! Pretectal region
xref: MA:0001062 ! pretectal region
xref: NIF_GrossAnatomy:birnlex_703 ! Pretectal region
xref: TAO:0000418 ! pretectum
xref: ZFA:0000418 ! pretectum
is_a: UBERON:0000481 ! multi-tissue structure
relationship: part_of UBERON:0001891 ! midbrain
relationship: part_of UBERON:0001894 ! diencephalon

[Term]
id: UBERON:0001945
name: superior colliculus
alt_id: UBERON:FMA_62403-MA_0001068-ZFA_0000445
def: "The roof of the midbrain, morphologically visible by the end of the segmentation period. <a href='http://zfin.org/cgi-bin/ZFIN_jump?record=ZDB-PUB-961014-576'>Kimmel et al, 1995.</a>" [Wikipedia:Superior_colliculus, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Anterior colliculus" EXACT []
synonym: "anterior colliculus" EXACT []
synonym: "Anterior corpus quadrigeminum" EXACT []
synonym: "anterior corpus quadrigeminum" EXACT []
synonym: "Cranial colliculus" EXACT []
synonym: "cranial colliculus" EXACT []
synonym: "dorsal midbrain" RELATED []
synonym: "Optic tectum" EXACT []
synonym: "optic tectum" EXACT []
synonym: "Superior colliculus" EXACT []
synonym: "tectal lobe" RELATED []
synonym: "tectum" RELATED []
synonym: "tectum opticum" RELATED []
xref: FMA:62403 ! Superior colliculus
xref: GAID:576 ! superior colliculus
xref: MA:0001068 ! superior colliculus
xref: NIF_GrossAnatomy:birnlex_1040 ! Superior colliculus
xref: TAO:0000445 ! optic tectum
xref: ZFA:0000445 ! optic tectum
is_a: UBERON:0002966 ! regional part of midbrain tectum
relationship: part_of UBERON:0002259 ! tectal plate

[Term]
id: UBERON:0001946
name: inferior colliculus
alt_id: UBERON:FMA_62404-MA_0001067
def: "." [Wikipedia:Inferior_colliculus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Caudal colliculus" EXACT []
synonym: "caudal colliculus" EXACT []
synonym: "Inferior colliculus" EXACT []
synonym: "Posterior colliculus" EXACT []
synonym: "posterior colliculus" EXACT []
synonym: "Posterior corpus quadrigeminum" EXACT []
synonym: "posterior corpus quadrigeminum" EXACT []
xref: FMA:62404 ! Inferior colliculus
xref: GAID:575 ! inferior colliculus
xref: MA:0001067 ! inferior colliculus
xref: NIF_GrossAnatomy:birnlex_806 ! Inferior colliculus
is_a: UBERON:0002966 ! regional part of midbrain tectum
relationship: part_of UBERON:0002259 ! tectal plate

[Term]
id: UBERON:0001947
name: red nucleus
alt_id: UBERON:FMA_62407-MA_0001063
def: "." [Wikipedia:Red_nucleus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Red nucleus" EXACT []
xref: FMA:62407 ! Red nucleus
xref: GAID:586 ! red nucleu
xref: MA:0001063 ! red nucleus
xref: NIF_GrossAnatomy:birnlex_1478 ! Red nucleus
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0001943 ! midbrain tegmentum

[Term]
id: UBERON:0001948
name: regional part of spinal cord
alt_id: UBERON:FMA_62420-ZFA_0001332
def: "." [Wikipedia:Spinal_cord_segment]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Segment of spinal cord" EXACT []
synonym: "Spinal cord segment" EXACT []
synonym: "spinal cord segment" RELATED []
synonym: "spinal neuromere" EXACT []
synonym: "spinal neuromeres" RELATED []
xref: FMA:62420 ! Segment of spinal cord
xref: TAO:0001332 ! spinal neuromere
xref: ZFA:0001332 ! spinal neuromere
is_a: UBERON:0000073 ! regional part of nervous system

[Term]
id: UBERON:0001949
name: gingival epithelium
alt_id: UBERON:FMA_62423-MA_0001576
comment: This class was created automatically from a combination of ontologies
synonym: "Epithelium of gingiva" EXACT []
synonym: "epithelium of gingiva" EXACT []
synonym: "Gingival epithelium" EXACT []
xref: FMA:62423 ! Gingival epithelium
xref: MA:0001576 ! gingival epithelium
is_a: UBERON:0000486 ! multilaminar epithelium
intersection_of: UBERON:0000483 ! epithelium
intersection_of: part_of UBERON:0001828 ! gingiva
relationship: part_of UBERON:0001828 ! gingiva
xref: ncithesaurus:Gingival_Epithelium ! Gingival Epithelium

[Term]
id: UBERON:0001950
name: neocortex
alt_id: UBERON:FMA_62429-MA_0002754
def: "." [Wikipedia:Neocortex]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "cerebral cortex" RELATED []
synonym: "Cerebral neocortex" EXACT []
synonym: "cerebral neocortex" EXACT []
synonym: "Homogenetic cortex" EXACT []
synonym: "homogenetic cortex" EXACT []
synonym: "Isocortex (sensu lato)" EXACT []
synonym: "isocortex (sensu lato)" EXACT []
synonym: "Neocortex" EXACT []
synonym: "Neopallial cortex" EXACT []
synonym: "neopallial cortex" EXACT []
synonym: "Neopallium" EXACT []
synonym: "neopallium" EXACT []
xref: BTO:0000920
xref: FMA:62429 ! Neocortex
xref: GAID:677 ! neocortex
xref: MA:0002754 ! neocortex
xref: NIF_GrossAnatomy:birnlex_2547 ! Neocortex
is_a: UBERON:0002619 ! regional part of cerebral cortex
relationship: part_of UBERON:0000956 ! cerebral cortex

[Term]
id: UBERON:0001951
name: epithelium of nasopharynx
alt_id: UBERON:FMA_62452-MA_0001865
alt_id: UBERON:0003237
comment: This class was created automatically from a combination of ontologies
synonym: "Epithelium of nasopharynx" EXACT []
synonym: "Nasopharynx epithelium" EXACT []
synonym: "nasopharynx epithelium" EXACT []
xref: FMA:62452 ! Epithelium of nasopharynx
xref: HOG:0001038 ! nasopharynx epithelium
xref: MA:0001865 ! nasopharynx epithelium
xref: EHDAA:7090 ! epithelium
is_a: UBERON:0000485 ! simple columnar epithelium
intersection_of: UBERON:0000483 ! epithelium
intersection_of: part_of UBERON:0001728 ! nasopharynx
relationship: part_of UBERON:0001728 ! nasopharynx
xref: ncithesaurus:Nasopharynx_Epithelium ! Nasopharynx Epithelium

[Term]
id: UBERON:0001952
name: epithelium of oropharynx
alt_id: UBERON:FMA_62453-MA_0001605
comment: This class was created automatically from a combination of ontologies
synonym: "Epithelium of oropharynx" EXACT []
synonym: "Oropharynx epithelium" EXACT []
synonym: "oropharynx epithelium" EXACT []
xref: FMA:62453 ! Epithelium of oropharynx
xref: MA:0001605 ! oropharynx epithelium
is_a: UBERON:0000486 ! multilaminar epithelium
intersection_of: UBERON:0000483 ! epithelium
intersection_of: part_of UBERON:0001729 ! oropharynx
relationship: part_of UBERON:0001729 ! oropharynx
xref: ncithesaurus:Oropharynx_Epithelium ! Oropharynx Epithelium

[Term]
id: UBERON:0001953
name: presubiculum
alt_id: UBERON:FMA_62486-MA_0000923
comment: This class was created automatically from a combination of ontologies
synonym: "Area 27 of Brodmann" EXACT []
synonym: "area 27 of brodmann" EXACT []
synonym: "Presubiculum" EXACT []
xref: FMA:62486 ! Presubiculum
xref: MA:0000923 ! presubiculum
xref: NIF_GrossAnatomy:birnlex_1108 ! Presubiculum
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001017 ! central nervous system

[Term]
id: UBERON:0001954
name: hippocampus
alt_id: UBERON:FMA_62493-MA_0000191-MIAA_0000114
def: "The hippocampus is a major component of the brains of humans and other mammals. It belongs to the limbic system and plays major roles in long term memory and spatial navigation. Like the cerebral cortex, it is a paired structure, with mirror-image halves in the left and right sides of the brain. The hippocampus is closely associated with the cerebral cortex, and in primates is located in the medial temporal lobe, underneath the cortical surface. It is shaped like a curved tube, which in humans is convoluted in a way that reminded early anatomists of a seahorse." [Wikipedia:Hippocampus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Ammon's horn" EXACT []
synonym: "ammon's horn" RELATED []
synonym: "Hippocampus" EXACT []
synonym: "Hippocampus major" EXACT []
synonym: "hippocampus major" EXACT []
synonym: "Hippocampus proper" EXACT []
synonym: "hippocampus proper" EXACT []
xref: BTO:0000601
xref: EFO:0000530 ! hippocampus
xref: FMA:62493 ! Hippocampus
xref: GAID:623 ! hippocampus
xref: HOG:0001177 ! hippocampus
xref: MA:0000191 ! hippocampus
xref: MAT:0000114 ! hippocampus
xref: MIAA:0000114 ! hippocampus
xref: NIF_GrossAnatomy:birnlex_721 ! Hippocampus
xref: NIF_GrossAnatomy:birnlex_726 ! Hippocampus proper
xref: OpenCyc:Mx4rv3piFJwpEbGdrcN5Y29ycA
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0000349 ! limbic system
relationship: part_of UBERON:0000955 ! brain
xref: ncithesaurus:Hippocampus ! Hippocampus

[Term]
id: UBERON:0001955
name: epithelium of respiratory bronchiole
alt_id: UBERON:FMA_62498-MA_0001773
comment: This class was created automatically from a combination of ontologies
synonym: "Epithelium of respiratory bronchiole" EXACT []
synonym: "Respiratory bronchiole epithelium" EXACT []
synonym: "respiratory bronchiole epithelium" EXACT []
xref: FMA:62498 ! Epithelium of respiratory bronchiole
xref: MA:0001773 ! respiratory bronchiole epithelium
is_a: UBERON:0002051 ! epithelium of bronchiole
intersection_of: UBERON:0000483 ! epithelium
intersection_of: part_of UBERON:0002188 ! respiratory bronchiole
relationship: part_of UBERON:0002188 ! respiratory bronchiole
xref: ncithesaurus:Respiratory_Bronchiole_Epithelium ! Respiratory Bronchiole Epithelium

[Term]
id: UBERON:0001956
name: cartilage of bronchus
alt_id: UBERON:FMA_62649-MA_0001835
comment: This class was created automatically from a combination of ontologies
synonym: "Bronchial cartilage" EXACT []
synonym: "bronchial cartilage" EXACT []
synonym: "bronchus cartilage" EXACT []
synonym: "Cartilage of bronchus" EXACT []
xref: FMA:62649 ! Cartilage of bronchus
xref: MA:0001835 ! bronchus cartilage
is_a: UBERON:0002418 ! cartilage
intersection_of: UBERON:0002418 ! cartilage
intersection_of: part_of UBERON:0002185 ! bronchus
relationship: part_of UBERON:0002185 ! bronchus
xref: ncithesaurus:Bronchus_Cartilage ! Bronchus Cartilage

[Term]
id: UBERON:0001957
name: submucosa of bronchus
alt_id: UBERON:FMA_62653-MA_0001837
comment: This class was created automatically from a combination of ontologies
synonym: "Bronchial submucosa" EXACT []
synonym: "bronchial submucosa" EXACT []
synonym: "bronchus submucosa" EXACT []
synonym: "Submucosa of bronchus" EXACT []
xref: FMA:62653 ! Submucosa of bronchus
xref: MA:0001837 ! bronchus submucosa
is_a: UBERON:0000009 ! submucosa
intersection_of: UBERON:0000009 ! submucosa
intersection_of: part_of UBERON:0002185 ! bronchus
relationship: part_of UBERON:0002185 ! bronchus
xref: ncithesaurus:Bronchus_Submucosa ! Bronchus Submucosa

[Term]
id: UBERON:0001958
name: epithelium of terminal bronchiole
alt_id: UBERON:FMA_62794-MA_0001774
comment: This class was created automatically from a combination of ontologies
synonym: "Epithelium of terminal bronchiole" EXACT []
synonym: "Terminal bronchiole epithelium" EXACT []
synonym: "terminal bronchiole epithelium" EXACT []
xref: FMA:62794 ! Epithelium of terminal bronchiole
xref: MA:0001774 ! terminal bronchiole epithelium
is_a: UBERON:0002051 ! epithelium of bronchiole
intersection_of: UBERON:0000483 ! epithelium
intersection_of: part_of UBERON:0002187 ! terminal bronchiole
relationship: part_of UBERON:0002187 ! terminal bronchiole
xref: ncithesaurus:Terminal_Bronchiole_Epithelium ! Terminal Bronchiole Epithelium

[Term]
id: UBERON:0001959
name: white pulp of spleen
alt_id: UBERON:FMA_62805-MA_0000762
def: "." [Wikipedia:White_pulp]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "spleen white pulp" EXACT []
synonym: "White pulp" EXACT []
synonym: "white pulp" EXACT []
synonym: "White pulp of spleen" EXACT []
xref: FMA:62805 ! White pulp of spleen
xref: MA:0000762 ! spleen white pulp
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0002106 ! spleen

[Term]
id: UBERON:0001960
name: periarterial lymphatic sheath
alt_id: UBERON:FMA_62810-MA_0000765
comment: This class was created automatically from a combination of ontologies
synonym: "PALS" EXACT []
synonym: "pals" EXACT []
synonym: "Periarterial lymphatic sheath" EXACT []
synonym: "Periarterial lymphoid sheath" EXACT []
synonym: "periarterial lymphoid sheath" EXACT []
synonym: "spleen periarteriolar lymphatic sheath" EXACT []
xref: FMA:62810 ! Periarterial lymphatic sheath
xref: MA:0000765 ! spleen periarteriolar lymphatic sheath
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001959 ! white pulp of spleen

[Term]
id: UBERON:0001961
name: mucosa-associated lymphoid tissue
alt_id: UBERON:FMA_62819-MA_0000140
def: "diffuse system of small concentrations of lymphoid tissue found in various sites of the body such as the gastrointestinal tract, thyroid, breast, lung, salivary glands, eye, and skin[WP]. Mucosal-associated lymphoid tissue is typically found as nodules associated with mucosal epithelia with distinct internal structures including B- and T-zones for the activation of lymphocytes[GO]." [Wikipedia:Mucosa-associated_lymphoid_tissue]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Epithelio-lymphoid tissue" EXACT []
synonym: "epithelio-lymphoid tissue" EXACT []
synonym: "MALT" EXACT []
synonym: "malt" EXACT []
synonym: "mucosa associated lymphatic tissue" EXACT []
synonym: "mucosa associated lymphoid tissue" EXACT []
synonym: "Mucosa-associated lymphoid tissue" EXACT []
xref: FMA:62819 ! Mucosa-associated lymphoid tissue
xref: MA:0000140 ! mucosa associated lymphoid tissue
is_a: UBERON:0001744 ! lymphoid tissue
relationship: part_of UBERON:0001744 ! lymphoid tissue
xref: ncithesaurus:Mucosa-Associated_Lymphoid_Tissue ! Mucosa-Associated Lymphoid Tissue

[Term]
id: UBERON:0001962
name: gut-associated lymphoid tissue
alt_id: UBERON:FMA_62820-MA_0000136
def: "Mucosa-associated lymphoid tissue in digestive tract. includes Peyer's patches, appendix, and solitary lymph nodules[GO]." [Wikipedia:Gut-associated_lymphoid_tissue]
subset: uberon_slim
synonym: "GALT" RELATED []
synonym: "gut associated lymphoid tissue" EXACT []
synonym: "Gut-associated lymphoid tissue" EXACT []
xref: FMA:62820 ! Gut-associated lymphoid tissue
xref: MA:0000136 ! gut associated lymphoid tissue
is_a: UBERON:0001961 ! mucosa-associated lymphoid tissue
xref: ncithesaurus:Gut_Associated_Lymphoid_Tissue ! Gut-Associated Lymphoid Tissue

[Term]
id: UBERON:0001963
name: bronchial-associated lymphoid tissue
alt_id: UBERON:FMA_62821-MA_0000135
comment: This class was created automatically from a combination of ontologies
synonym: "BALT" RELATED []
synonym: "Bronchial-associated lymphoid tissue" EXACT []
synonym: "bronchus associated lymphoid tissue" EXACT []
xref: FMA:62821 ! Bronchial-associated lymphoid tissue
xref: MA:0000135 ! bronchus associated lymphoid tissue
is_a: UBERON:0001961 ! mucosa-associated lymphoid tissue
xref: ncithesaurus:Bronchus-Associated_Lymphoid_Tissue ! Bronchus-Associated Lymphoid Tissue

[Term]
id: UBERON:0001964
name: least splanchnic nerve
alt_id: UBERON:FMA_6283-MA_0002635
def: "." [Wikipedia:Least_splanchnic_nerve]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Least splanchnic nerve" EXACT []
synonym: "Least thoracic splanchnic nerve" EXACT []
synonym: "least thoracic splanchnic nerve" EXACT []
synonym: "Lowest splanchnic nerve" EXACT []
synonym: "lowest splanchnic nerve" EXACT []
synonym: "Renal branch of lesser splanchnic nerve" EXACT []
synonym: "renal branch of lesser splanchnic nerve" EXACT []
synonym: "Renal nerve" EXACT []
synonym: "renal nerve" EXACT []
xref: FMA:6283 ! Least splanchnic nerve
xref: MA:0002635 ! renal nerve
is_a: UBERON:0000062 ! organ
relationship: part_of UBERON:0002113 ! kidney

[Term]
id: UBERON:0001965
name: substantia nigra pars compacta
alt_id: UBERON:FMA_62907-MA_0001064
def: "Regional part of substantia nigra consisting of a densely packed region of cells, more or less dorsal to the pars reticulata, but extending into the pars reticulata in some species. The dominant neurotransmitter used by pars compacta neurons is dopamine. Pars compacta neurons are pigmented in many species (MM)[NIF]." [NIF_GrossAnatomy:birnlex_990, Wikipedia:Substantia_nigra_pars_compacta]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Compact part of substantia nigra" EXACT []
synonym: "compact part of substantia nigra" EXACT []
synonym: "Pars compacta" EXACT []
synonym: "pars compacta" EXACT []
synonym: "SNpc" EXACT []
synonym: "Substantia nigra pars compacta" EXACT []
synonym: "Substantia nigra, compact part" EXACT []
synonym: "substantia nigra, compact part" EXACT []
xref: FMA:62907 ! Substantia nigra pars compacta
xref: MA:0001064 ! substantia nigra pars compacta
xref: NIF_GrossAnatomy:birnlex_990 ! Substantia nigra pars compacta
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0002038 ! substantia nigra
xref: BTO:0003749 ! pars compacta

[Term]
id: UBERON:0001966
name: substantia nigra pars reticulata
alt_id: UBERON:FMA_62908-MA_0001066
def: "Regional part of substantia nigra consisting of loosely packed cells, generally located ventral and lateral to the pars compacta. Many cells in this region use GABA as a neurotransmitter (MM)[NLex]." [Wikipedia:Pars_reticulata, Neurolex:Substantia_nigra_pars_reticulata]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Pars reticulata" EXACT []
synonym: "pars reticulata" EXACT []
synonym: "Reticular part of substantia nigra" EXACT []
synonym: "reticular part of substantia nigra" EXACT []
synonym: "Substantia nigra pars reticulata" EXACT []
synonym: "Substantia nigra, reticular part" EXACT []
synonym: "substantia nigra, reticular part" EXACT []
xref: FMA:62908 ! Substantia nigra pars reticulata
xref: MA:0001066 ! substantia nigra pars reticulata
xref: NIF_GrossAnatomy:birnlex_968 ! Substantia nigra pars reticulata
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0002038 ! substantia nigra
xref: BTO:0003750 ! pars reticulata

[Term]
id: UBERON:0001967
name: reticular lamina
alt_id: UBERON:FMA_62924-MA_0001194
def: "." [Wikipedia:Reticular_lamina]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Fibroreticular lamina" EXACT []
synonym: "fibroreticular lamina" EXACT []
synonym: "Lamina fibroreticularis" EXACT []
synonym: "lamina fibroreticularis" EXACT []
synonym: "Reticular lamina" EXACT []
synonym: "reticular membrane" RELATED []
xref: FMA:62924 ! Reticular lamina
xref: MA:0001194 ! reticular lamina
is_a: UBERON:0000476 ! acellular anatomical structure
relationship: part_of UBERON:0000476 ! acellular anatomical structure
relationship: part_of UBERON:0002227 ! spiral organ of cochlea

[Term]
id: UBERON:0001968
name: semen
alt_id: UBERON:FMA_62966-MA_0002522
alt_id: UBERON:FMA_62967-MA_0002523-MIAA_0000057
alt_id: UBERON:FMA_62969-MA_0002526
def: "Body substance which consists of spermatozoa and seminal plasma. // Secretion produced prostatic glands, bulbourethral glands or the seminal vesicles." [Wikipedia:Semen]
comment: TODO: check semen vs seminal fluid
subset: uberon_slim
synonym: "Secretion of seminal vesicle" EXACT []
synonym: "secretion of seminal vesicle" EXACT []
synonym: "Semen" EXACT []
synonym: "semen" BROAD []
synonym: "Seminal fluid" EXACT []
synonym: "seminal fluid" EXACT []
synonym: "Seminal vesicle secretion" EXACT []
synonym: "seminal vesicle secretion" EXACT []
xref: BTO:0001230
xref: FMA:62966 ! Semen
xref: FMA:62967 ! Seminal fluid
xref: FMA:62969 ! Secretion of seminal vesicle
xref: GAID:1169 ! semen
xref: MA:0002522 ! semen
xref: MA:0002523 ! seminal fluid
xref: MA:0002526 ! seminal vesicle secretion
xref: MAT:0000057 ! seminal fluid
xref: MIAA:0000057 ! seminal fluid
xref: OpenCyc:Mx4rvgC-zpwpEbGdrcN5Y29ycA
is_a: UBERON:0000463 ! portion of organism substance
xref: ncithesaurus:Semen ! Semen

[Term]
id: UBERON:0001969
name: blood plasma
alt_id: UBERON:FMA_62970-MA_0002501-MIAA_0000052
def: "Body substance in liquid state contained in the lumen of arterial and venous trees, blood capillary and the cardiac chambers; constitutes the liquid phase of blood." [Wikipedia:Blood_plasma]
subset: uberon_slim
synonym: "plasma" EXACT []
synonym: "portion of blood plasma" EXACT []
synonym: "portion of plasma" EXACT []
xref: BTO:0000131
xref: FMA:62970 ! Portion of plasma
xref: GAID:1178 ! plasma
xref: MA:0002501 ! plasma
xref: MAT:0000052 ! blood plasma
xref: MIAA:0000052 ! blood plasma
xref: OpenCyc:Mx4rEg4ZYrIbEduAAAAOpmP6tw
is_a: UBERON:0000463 ! portion of organism substance
relationship: part_of UBERON:0000178 ! blood
xref: ncithesaurus:Plasma ! Plasma

[Term]
id: UBERON:0001970
name: bile
alt_id: UBERON:FMA_62971-MA_0002513
def: "." [Wikipedia:Bile]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Bile" EXACT []
xref: BTO:0000121
xref: ENVO:02000023
xref: FMA:62971 ! Bile
xref: GAID:1157 ! bile
xref: galen:Bile
xref: MA:0002513 ! bile
is_a: UBERON:0000463 ! portion of organism substance
xref: ncithesaurus:Bile ! Bile

[Term]
id: UBERON:0001971
name: gastric juice
alt_id: UBERON:FMA_62972-MA_0002519
def: "." [Wikipedia:Gastric_juice]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Gastric juice" EXACT []
synonym: "stomach secretion" EXACT []
xref: BTO:0000501
xref: FMA:62972 ! Gastric juice
xref: GAID:1160 ! gastric juice
xref: galen:GastricJuice
xref: MA:0002519 ! stomach secretion
is_a: UBERON:0000463 ! portion of organism substance

[Term]
id: UBERON:0001972
name: submucosa of esophagus
alt_id: UBERON:FMA_62997-MA_0002724
comment: This class was created automatically from a combination of ontologies
synonym: "Esophageal submucosa" EXACT []
synonym: "esophageal submucosa" EXACT []
synonym: "Esophagus submucosa" EXACT []
synonym: "esophagus submucosa" EXACT []
synonym: "Submucosa of esophagus" EXACT []
synonym: "Submucosa of oesophagus" EXACT []
synonym: "submucosa of oesophagus" EXACT []
xref: FMA:62997 ! Submucosa of esophagus
xref: MA:0002724 ! esophagus submucosa
is_a: UBERON:0000009 ! submucosa
intersection_of: UBERON:0000009 ! submucosa
intersection_of: part_of UBERON:0001043 ! esophagus
relationship: part_of UBERON:0001096 ! wall of esophagus

[Term]
id: UBERON:0001973
name: substance of tooth
alt_id: UBERON:FMA_63001-MA_0002540
def: "Body substance in solid state produced by odontoblasts, amyloblasts or cementoblasts." []
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Substance of tooth" EXACT []
synonym: "Tooth substance" EXACT []
synonym: "tooth substance" EXACT []
xref: FMA:63001 ! Portion of substance of tooth
xref: MA:0002540 ! tooth substance
is_a: UBERON:0000463 ! portion of organism substance
relationship: part_of UBERON:0001091 ! tooth

[Term]
id: UBERON:0001974
name: lamina propria of esophagus
alt_id: UBERON:FMA_63050-MA_0001568
comment: This class was created automatically from a combination of ontologies
synonym: "esophagus lamina propria" EXACT []
synonym: "Lamina propria mucosae of esophagus" EXACT []
synonym: "lamina propria mucosae of esophagus" EXACT []
synonym: "Lamina propria of esophagus" EXACT []
synonym: "oesophagus lamina propria" RELATED []
xref: FMA:63050 ! Lamina propria of esophagus
xref: MA:0001568 ! esophagus lamina propria
is_a: UBERON:0000030 ! lamina propria
intersection_of: UBERON:0000030 ! lamina propria
intersection_of: part_of UBERON:0001043 ! esophagus

[Term]
id: UBERON:0001975
name: serosa of esophagus
alt_id: UBERON:FMA_63057-MA_0001571
comment: This class was created automatically from a combination of ontologies
synonym: "Esophagus serosa" EXACT []
synonym: "esophagus serosa" EXACT []
synonym: "oesophagus serosa" RELATED []
synonym: "Serosa of abdominal part of esophagus" EXACT []
synonym: "serosa of abdominal part of esophagus" EXACT []
synonym: "Serosa of esophagus" EXACT []
synonym: "Serosa of oesophagus" EXACT []
synonym: "serosa of oesophagus" EXACT []
synonym: "Serous coat of oesophagus" EXACT []
synonym: "serous coat of oesophagus" EXACT []
xref: FMA:63057 ! Serosa of esophagus
xref: MA:0001571 ! esophagus serosa
is_a: UBERON:0000042 ! serous membrane
intersection_of: UBERON:0000042 ! serous membrane
intersection_of: part_of UBERON:0001043 ! esophagus
relationship: part_of UBERON:0001096 ! wall of esophagus

[Term]
id: UBERON:0001976
name: epithelium of esophagus
alt_id: UBERON:FMA_63063-MA_0001565-ZFA_0001499
def: "Simple columnar epithelium that lines the esophagus. <a href='http://zfin.org/cgi-bin/ZFIN_jump?record=ZDB-PUB-070426-1'>Chen et al, 2007.</a>" [ZFIN:curator]
comment: Different kinds of epithelium in ZFA and FMA - DV with CARO
subset: uberon_slim
synonym: "Epithelium of esophagus" EXACT []
synonym: "Esophageal epithelium" EXACT []
synonym: "esophageal epithelium" EXACT []
synonym: "Esophagus epithelium" EXACT []
synonym: "esophagus epithelium" EXACT []
synonym: "oesophagus epithelium" RELATED []
xref: FMA:63063 ! Epithelium of esophagus
xref: MA:0001565 ! esophagus epithelium
xref: TAO:0001499 ! esophageal epithelium
xref: ZFA:0001499 ! esophageal epithelium
is_a: UBERON:0000485 ! simple columnar epithelium
is_a: UBERON:0000486 ! multilaminar epithelium
intersection_of: UBERON:0000483 ! epithelium
intersection_of: part_of UBERON:0001043 ! esophagus
relationship: part_of UBERON:0001043 ! esophagus
xref: ncithesaurus:Esophageal_Epithelium ! Esophageal Epithelium
xref: BTO:0001578 ! esophageal epithelium

[Term]
id: UBERON:0001977
name: serum
alt_id: UBERON:FMA_63083-MA_0002502
def: "Body substance derived from plasma by the elimination of fibrinogen." [Wikipedia:Serum]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Blood serum" EXACT []
synonym: "blood serum" EXACT []
synonym: "Serum" EXACT []
xref: BTO:0000133
xref: BTO:0001239
xref: FMA:63083 ! Serum
xref: MA:0002502 ! serum
is_a: UBERON:0000463 ! portion of organism substance
relationship: part_of UBERON:0001969 ! blood plasma
xref: ncithesaurus:Serum ! Serum

[Term]
id: UBERON:0001978
name: parenchyma of pancreas
alt_id: UBERON:FMA_63120-MA_0000724
comment: This class was created automatically from a combination of ontologies
synonym: "pancreas parenchyma" EXACT []
synonym: "Pancreatic parenchyma" EXACT []
synonym: "pancreatic parenchyma" EXACT []
synonym: "Parenchyma of pancreas" EXACT []
xref: FMA:63120 ! Parenchyma of pancreas
xref: HOG:0001430 ! pancreas parenchyma
xref: MA:0000724 ! pancreas parenchyma
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001264 ! pancreas

[Term]
id: UBERON:0001979
name: venule
alt_id: UBERON:FMA_63130-MA_0000071
def: "Subdivision of venous tree (organ) which is directly continuous with the capillary vessel." [Wikipedia:Venule]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Venule" EXACT []
xref: FMA:63130 ! Venule
xref: MA:0000071 ! venule
is_a: UBERON:0000063 ! organ segment
relationship: part_of UBERON:0001009 ! circulatory system
xref: ncithesaurus:Venule ! Venule
xref: BTO:0002626 ! venule

[Term]
id: UBERON:0001980
name: arteriole
alt_id: UBERON:FMA_63182-MA_0000063
def: "Subdivision of arterial tree (organ) which is directly continuous with capillary vessel." [Wikipedia:Arteriole]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Arteriole" EXACT []
xref: FMA:63182 ! Arteriole
xref: MA:0000063 ! arteriole
is_a: UBERON:0000063 ! organ segment
relationship: part_of UBERON:0001009 ! circulatory system
xref: ncithesaurus:Arteriole ! Arteriole
xref: BTO:0001997 ! arteriole

[Term]
id: UBERON:0001981
name: blood vessel
alt_id: UBERON:FMA_63183-XAO_0001011
def: "Any of the vessels through which blood circulates in the body." [BTO:0001102, Wikipedia:Blood_vessel]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Blood vessel" EXACT []
xref: BTO:0001102
xref: EFO:0000817 ! blood vessel
xref: EHDAA:240 ! blood vessels
xref: FMA:63183 ! Blood vessel
xref: GAID:169 ! blood vessel
xref: HOG:0001250 ! blood vessel
xref: MA:0000060 ! blood vessel
xref: MAT:0000393 ! blood vessel
xref: OpenCyc:Mx4rvVjxlpwpEbGdrcN5Y29ycA
xref: XAO:0001011 ! blood vessel
is_a: UBERON:0000055 ! vessel
disjoint_from: UBERON:0001473 ! lymphatic vessel
relationship: has_part UBERON:0000178 ! blood
relationship: part_of UBERON:0001009 ! circulatory system
relationship: part_of UBERON:0002049 ! vasculature
xref: ncithesaurus:Blood_Vessel ! Blood Vessel

[Term]
id: UBERON:0001982
name: capillary
alt_id: UBERON:FMA_63194-MA_0000065-XAO_0000116
def: "Subdivision of vascular tree (organ) which connects an arteriole to a venule or vice-versa. // Any of the smallest blood vessels connecting arterioles with venules." [NLM:capillary, Wikipedia:Capillary]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Blood capillary" EXACT []
synonym: "blood capillary" EXACT []
synonym: "Capillary" EXACT []
synonym: "Capillary vessel" EXACT []
synonym: "capillary vessel" EXACT []
xref: FMA:63194 ! Capillary
xref: HOG:0001253 ! capillary
xref: MA:0000065 ! capillary
xref: OpenCyc:Mx4rvWEU-5wpEbGdrcN5Y29ycA
xref: XAO:0000116 ! capillary
is_a: UBERON:0001981 ! blood vessel
xref: ncithesaurus:Capillary ! Capillary
xref: BTO:0002045 ! capillary

[Term]
id: UBERON:0001983
name: crypt of lieberkuhn
alt_id: UBERON:FMA_63621-MA_0001535
def: "A gland found in the epithelial lining of the small intestine and colon." [Wikipedia:Crypts_of_Lieberkuhn]
comment: This class was created automatically from a combination of ontologies
synonym: "Crypt of Lieberkuhn" EXACT []
synonym: "intestinal gland" EXACT [Wikipedia:Crypts_of_Lieberkuhn]
synonym: "Lieberkuhn crypt" EXACT []
synonym: "lieberkuhn crypt" EXACT []
xref: FMA:63621 ! Crypt of Lieberkuhn
xref: MA:0001535 ! crypt of lieberkuhn
is_a: UBERON:0002530 ! gland
relationship: part_of UBERON:0001242 ! intestinal mucosa
xref: ncithesaurus:Crypts_of_the_Lieberkuhn ! Crypt of Lieberkuhn

[Term]
id: UBERON:0001984
name: crypt of lieberkuhn of large intestine
alt_id: UBERON:FMA_63622-MA_0001544
comment: This class was created automatically from a combination of ontologies
synonym: "Crypt of Lieberkuhn of large intestine" EXACT []
synonym: "Large intestinal crypt of Lieberkuhn" EXACT []
synonym: "large intestinal crypt of lieberkuhn" EXACT []
synonym: "large intestine crypt of lieberkuhn" EXACT []
xref: FMA:63622 ! Crypt of Lieberkuhn of large intestine
xref: MA:0001544 ! large intestine crypt of lieberkuhn
is_a: UBERON:0001983 ! crypt of lieberkuhn
intersection_of: UBERON:0001983 ! crypt of lieberkuhn
intersection_of: part_of UBERON:0000059 ! large intestine
relationship: part_of UBERON:0001207 ! mucosa of large intestine
xref: ncithesaurus:Large_Intestinal_Crypt_of_the_Lieberkuhn ! Large Intestinal Crypt of Lieberkuhn

[Term]
id: UBERON:0001985
name: corneal endothelium
alt_id: UBERON:FMA_63882-MA_0001242
def: "A monolayer of specialized, flattened, mitochondria-rich cells that lines the posterior surface of the cornea and faces the anterior chamber of the eye[WP]." [Wikipedia:Corneal_endothelium]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
xref: FMA:63882 ! Corneal endothelium
xref: GAID:891 ! corneal endothelium
xref: MA:0001242 ! corneal endothelium
xref: ZFA:0001687 ! corneal endothelium
is_a: UBERON:0001986 ! endothelium
intersection_of: UBERON:0001986 ! endothelium
intersection_of: part_of UBERON:0000964 ! cornea
xref: ncithesaurus:Corneal_Endothelium ! Corneal Endothelium

[Term]
id: UBERON:0001986
name: endothelium
alt_id: UBERON:FMA_63916-ZFA_0001639
def: "An endothelium is an epithelium that lines an anatomical structure[GO]. Endothelial cells are thin flattened cells which line the inside surfaces of body cavities, blood vessels, and lymph vessels, making up the endothelium[GO]. Simple squamous epithelium which lines blood and lymphatic vessels and the heart[ZFA]." [Wikipedia:Endothelium, ZFIN:curator, GO:0001935, GO:0003158]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Endothelium" EXACT []
xref: BTO:0000393
xref: EHDAA:1011 ! endothelium
xref: EHDAA:1543 ! endothelium
xref: EHDAA:1560 ! endothelium
xref: EHDAA:1566 ! endothelium
xref: EHDAA:1578 ! endothelium
xref: EHDAA:2211 ! endothelium
xref: EHDAA:2217 ! endothelium
xref: EHDAA:2227 ! endothelium
xref: EHDAA:3076 ! endothelium
xref: EHDAA:3082 ! endothelium
xref: EHDAA:3790 ! endothelium
xref: EHDAA:4953 ! endothelium
xref: EHDAA:4961 ! endothelium
xref: EHDAA:4975 ! endothelium
xref: EHDAA:4983 ! endothelium
xref: EHDAA:4991 ! endothelium
xref: FMA:63916 ! Endothelium
xref: GAID:520 ! endothelium
xref: galen:Endothelium
xref: ZFA:0001639 ! endothelium
is_a: UBERON:0000487 ! simple squamous epithelium
xref: ncithesaurus:Endothelium ! Endothelium

[Term]
id: UBERON:0001987
name: placenta
alt_id: UBERON:FMA_63934-MA_0000386-MIAA_0000279
def: "organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin[GO]." [Wikipedia:Placenta]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Placenta" EXACT []
xref: BTO:0001078
xref: FMA:63934 ! Placenta
xref: GAID:379 ! placenta
xref: HOG:0001266 ! placenta
xref: MA:0000386 ! placenta
xref: MAT:0000279 ! placenta
xref: MIAA:0000279 ! placenta
is_a: UBERON:0000478 ! extraembryonic structure
relationship: part_of UBERON:0000990 ! reproductive system
xref: ncithesaurus:Placenta ! Placenta

[Term]
id: UBERON:0001988
name: feces
alt_id: UBERON:FMA_64183-MA_0002509-MIAA_0000053
def: "Excretion in semisolid state processed by the intestine." [Wikipedia:Feces]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "faeces" EXACT []
synonym: "Fecal matter" EXACT []
synonym: "fecal matter" EXACT []
synonym: "Feces" EXACT []
synonym: "Stool" EXACT []
synonym: "stool" EXACT []
xref: BTO:0000440
xref: ENVO:00002003
xref: FMA:64183 ! Feces
xref: GAID:1199 ! feces
xref: galen:Feces
xref: MA:0002509 ! feces
xref: MAT:0000053 ! faeces
xref: MIAA:0000053 ! faeces
xref: OpenCyc:Mx4rvVjJMZwpEbGdrcN5Y29ycA
is_a: UBERON:0000463 ! portion of organism substance
xref: ncithesaurus:Feces ! Feces

[Term]
id: UBERON:0001989
name: superior cervical ganglion
alt_id: UBERON:FMA_6467-MA_0001156-ZFA_0001572
def: "Trunk ganglion which is bilaterally paired and located at the anterior end of the sympathetic ganglion chain." [Wikipedia:Superior_cervical_ganglion, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Superior cervical ganglion" EXACT []
synonym: "Superior cervical sympathetic ganglion" EXACT []
synonym: "superior cervical sympathetic ganglion" EXACT []
synonym: "superior sympathetic cervical ganglion" RELATED []
xref: BTO:0001325
xref: EHDAA:8943 ! superior cervical ganglion
xref: FMA:6467 ! Superior cervical ganglion
xref: GAID:712 ! superior cervical ganglion
xref: MA:0001156 ! superior cervical ganglion
xref: TAO:0001572 ! superior cervical ganglion
xref: ZFA:0001572 ! superior cervical ganglion
is_a: UBERON:0001991 ! cervical ganglion

[Term]
id: UBERON:0001990
name: middle cervical ganglion
alt_id: UBERON:FMA_6468-MA_0001155
def: "." [Wikipedia:Middle_cervical_ganglion]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Middle cervical ganglion" EXACT []
synonym: "Middle cervical sympathetic ganglion" EXACT []
synonym: "middle cervical sympathetic ganglion" EXACT []
xref: BTO:0000359
xref: EHDAA:8941 ! middle cervical ganglion
xref: FMA:6468 ! Middle cervical ganglion
xref: MA:0001155 ! middle cervical ganglion
is_a: UBERON:0001991 ! cervical ganglion

[Term]
id: UBERON:0001991
name: cervical ganglion
alt_id: UBERON:FMA_6470-MA_0001153
def: "." [Wikipedia:Cervical_ganglion]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Cervical ganglion" EXACT []
synonym: "Cervical sympathetic ganglion" EXACT []
synonym: "cervical sympathetic ganglion" EXACT []
xref: BTO:0000113
xref: FMA:6470 ! Cervical ganglion
xref: MA:0001153 ! cervical ganglion
is_a: UBERON:0001807 ! paravertebral ganglion
intersection_of: UBERON:0000045 ! ganglion
intersection_of: part_of UBERON:0000002 ! cervix

[Term]
id: UBERON:0001992
name: papillary layer of dermis
alt_id: UBERON:FMA_64776-MA_0000800
def: "Dense irregular connective tissue of the skin that consists of fibroblasts, various connective tissue cell types, and collagen, predominantly type III." [Wikipedia:Papillary_dermis]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "dermis papillary layer" EXACT []
synonym: "Papillary dermis" EXACT []
synonym: "papillary dermis" EXACT []
synonym: "Papillary layer of dermis" EXACT []
xref: FMA:64776 ! Papillary layer of dermis
xref: MA:0000800 ! dermis papillary layer
is_a: UBERON:0000061 ! anatomical structure
relationship: part_of UBERON:0002067 ! dermis

[Term]
id: UBERON:0001993
name: reticular layer of dermis
alt_id: UBERON:FMA_64778-MA_0000801
def: "Dense irregular connective tissue that consists of elastic fibers and collagen, predominantly type I." [Wikipedia:Reticular_dermis]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "dermis reticular layer" EXACT []
synonym: "Reticular dermis" EXACT []
synonym: "reticular dermis" EXACT []
synonym: "Reticular layer of dermis" EXACT []
xref: FMA:64778 ! Reticular layer of dermis
xref: MA:0000801 ! dermis reticular layer
is_a: UBERON:0000061 ! anatomical structure
relationship: part_of UBERON:0002067 ! dermis

[Term]
id: UBERON:0001994
name: hyaline cartilage
alt_id: UBERON:FMA_64783-MA_0000109
def: "Cartilage (tissue) which consists of chondrocytes and collagen, the intercellular matrix of which is an amorphous gel with a perichondrium." [Wikipedia:Hyaline_cartilage]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Hyaline cartilage" EXACT []
xref: FMA:64783 ! Hyaline cartilage
xref: MA:0000109 ! hyaline cartilage
is_a: UBERON:0002418 ! cartilage
xref: ncithesaurus:Hyaline_Cartilage ! Hyaline Cartilage

[Term]
id: UBERON:0001995
name: fibrocartilage
alt_id: UBERON:FMA_64784-MA_0000108
def: "Cartilage (tissue) which consists of chondrocytes and collagen, the intercellular matrix of which is an amorphous gel without a well-defined perichondrium." [Wikipedia:Fibrocartilage]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Fibrocartilage" EXACT []
xref: FMA:64784 ! Fibrocartilage
xref: galen:Fibrocartilage
xref: MA:0000108 ! fibrocartilage
is_a: UBERON:0002418 ! cartilage
xref: ncithesaurus:Fibrocartilage ! Fibrocartilage

[Term]
id: UBERON:0001996
name: elastic cartilage
alt_id: UBERON:FMA_64785-MA_0000107
def: "Cartilage (tissue) which consists of chondrocytes and collagen, the intercellular matrix of which consists of elastic fibers." [Wikipedia:Elastic_cartilage]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Elastic cartilage" EXACT []
xref: FMA:64785 ! Elastic cartilage
xref: MA:0000107 ! elastic cartilage
is_a: UBERON:0002418 ! cartilage
xref: ncithesaurus:Elastic_Cartilage ! Elastic Cartilage

[Term]
id: UBERON:0001997
name: olfactory epithelium
alt_id: UBERON:FMA_64803-ZFA_0000554
def: "Nasal epithelium wherein ciliated olfactory receptor neurons, supporting cells, and basal cells are located." [Wikipedia:Olfactory_epithelium, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "nasal epithelium" RELATED []
synonym: "nasal sensory epithelium" RELATED []
synonym: "Olfactory epithelium" EXACT []
synonym: "Olfactory sensory epithelium" EXACT []
synonym: "olfactory sensory epithelium" EXACT []
synonym: "Sensory olfactory epithelium" EXACT []
synonym: "sensory olfactory epithelium" EXACT []
xref: BTO:0000108
xref: FMA:64803 ! Olfactory epithelium
xref: HOG:0000985 ! olfactory epithelium
xref: MAT:0000445 ! olfactory epithelium
xref: NIF_GrossAnatomy:birnlex_2703 ! Olfactory epithelium
xref: TAO:0000554 ! olfactory epithelium
xref: ZFA:0000554 ! olfactory epithelium
is_a: UBERON:0000485 ! simple columnar epithelium
relationship: part_of UBERON:0001826 ! mucosa of nose
xref: ncithesaurus:Olfactory_Epithelium ! Olfactory Epithelium

[Term]
id: UBERON:0001998
name: sternocostal joint
alt_id: UBERON:FMA_64877-MA_0001512
comment: This class was created automatically from a combination of ontologies
synonym: "Sternochondral joint" EXACT []
synonym: "sternochondral joint" EXACT []
synonym: "Sternocostal joint" EXACT []
xref: FMA:64877
xref: GAID:271 ! sternocostal joint
xref: MA:0001512 ! sternocostal joint
is_a: UBERON:0002001 ! joint of rib
xref: FMA:71376 ! Set of sternocostal joints
xref: FMA:7954 ! Synovial sternocostal joint
xref: ncithesaurus:Sternocostal_Joint ! Sternocostal Joint

[Term]
id: UBERON:0001999
name: iliopsoas
alt_id: UBERON:FMA_64918-MA_0002321
def: "Anatomical cluster consisting of iliacus, psoas major, psoas minor[WP]." [Wikipedia:Iliopsoas]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Hyrtl's muscle" EXACT []
synonym: "hyrtl's muscle" EXACT []
synonym: "Iliopsoas" EXACT []
xref: FMA:64918 ! Iliopsoas
xref: MA:0002321 ! iliopsoas
is_a: UBERON:0000477 ! anatomical cluster

[Term]
id: UBERON:0002000
name: gluteal muscle
alt_id: UBERON:FMA_64922-MA_0000535
def: "." [Wikipedia:Gluteal_muscle]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Gluteal muscle" EXACT []
xref: BTO:0000531
xref: FMA:64922 ! Gluteal muscle
xref: MA:0000535 ! gluteal muscle
is_a: UBERON:0001497 ! muscle of pelvic girdle

[Term]
id: UBERON:0002001
name: joint of rib
alt_id: UBERON:FMA_64994-MA_0001508
comment: This class was created automatically from a combination of ontologies
synonym: "Joint of rib" EXACT []
synonym: "Rib joint" EXACT []
synonym: "rib joint" EXACT []
xref: FMA:64994
xref: MA:0001508 ! joint of rib
is_a: UBERON:0000982 ! joint
intersection_of: UBERON:0000982 ! joint
intersection_of: part_of UBERON:0002228 ! rib
xref: ncithesaurus:Joint_of_the_Rib ! Rib Joint

[Term]
id: UBERON:0002002
name: interchondral joint
alt_id: UBERON:FMA_64996-MA_0001511
comment: This class was created automatically from a combination of ontologies
synonym: "Interchondral joint" EXACT []
xref: FMA:64996
xref: MA:0001511 ! interchondral joint
is_a: UBERON:0002001 ! joint of rib
xref: FMA:71378 ! Set of interchondral joints
xref: FMA:7955 ! Synovial interchondral joint

[Term]
id: UBERON:0002003
name: peripheral nerve
alt_id: UBERON:FMA_65239-MA_0000228-XAO_0000204
def: "Neural tree (organ) which is directly continuous with the neuraxis. Examples: phrenic nerve, radial nerve, ilioinguinal nerve, sciatic nerve." [Wikipedia:Peripheral_nerve]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Peripheral nerve" EXACT []
synonym: "Peripheral nerve tree" EXACT []
synonym: "peripheral nerve tree" EXACT []
xref: BTO:0001027
xref: FMA:65239 ! Peripheral nerve
xref: GAID:747 ! peripheral nerve
xref: HOG:0000901 ! peripheral nerve
xref: MA:0000228 ! peripheral nerve
xref: XAO:0000204 ! peripheral nerve
is_a: UBERON:0001021 ! nerve
xref: ncithesaurus:Peripheral_Nerve ! Peripheral Nerve

[Term]
id: UBERON:0002004
name: trunk of sciatic nerve
alt_id: UBERON:FMA_65507-MA_0001178
comment: This class was created automatically from a combination of ontologies
synonym: "sciatic nerve trunk" EXACT []
synonym: "Sciatic neural trunk" EXACT []
synonym: "sciatic neural trunk" EXACT []
synonym: "Trunk of sciatic nerve" EXACT []
xref: FMA:65507 ! Trunk of sciatic nerve
xref: MA:0001178 ! sciatic nerve trunk
is_a: UBERON:0001147 ! trunk of peripheral nerve

[Term]
id: UBERON:0002005
name: enteric nervous system
alt_id: UBERON:FMA_66070-MA_0000222-MIAA_0000102-ZFA_0001155
def: "The enteric nervous system is composed of two ganglionated neural plexuses in the gut wall which form one of the three major divisions of the autonomic nervous system. The enteric nervous system innervates the gastrointestinal tract, the pancreas, and the gall bladder. It contains sensory neurons, interneurons, and motor neurons. Thus the circuitry can autonomously sense the tension and the chemical environment in the gut and regulate blood vessel tone, motility, secretions, and fluid transport. The system is itself governed by the central nervous system and receives both parasympathetic and sympathetic innervation[GO]." [Wikipedia:Enteric_nervous_system]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Enteric nervous system" EXACT []
synonym: "PNS - enteric" EXACT []
synonym: "pns - enteric" EXACT []
xref: EFO:0000895 ! enteric nervous system
xref: FMA:66070 ! Enteric nervous system
xref: GAID:799 ! enteric nervous system
xref: MA:0000222 ! enteric nervous system
xref: MAT:0000102 ! PNS - enteric
xref: MIAA:0000102 ! PNS - enteric
xref: NIF_GrossAnatomy:birnlex_1166 ! Enteric nervous system
xref: TAO:0001155 ! enteric nervous system
xref: ZFA:0001155 ! enteric nervous system
is_a: UBERON:0002410 ! autonomic nervous system
xref: BTO:0002506 ! enteric nervous system

[Term]
id: UBERON:0002006
name: cortex of lymph node
alt_id: UBERON:FMA_66253-MA_0000740
def: "Peripheral portion of the lymph node, underneath the capsule[WP]." [Wikipedia:Cortex_of_lymph_node]
subset: uberon_slim
synonym: "Cortex of lymph node" EXACT []
synonym: "Lymph node cortex" EXACT []
synonym: "lymph node cortex" EXACT []
xref: FMA:66253 ! Cortex of lymph node
xref: MA:0000740 ! lymph node cortex
is_a: UBERON:0001851 ! cortex
intersection_of: UBERON:0001851 ! cortex
intersection_of: part_of UBERON:0000029 ! lymph node
relationship: part_of UBERON:0000029 ! lymph node
xref: ncithesaurus:Lymph_Node_Cortex ! Lymph Node Cortex

[Term]
id: UBERON:0002007
name: medulla of lymph node
alt_id: UBERON:FMA_66254-MA_0000745
def: "." [Wikipedia:Medulla_of_lymph_node]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Lymph node medulla" EXACT []
synonym: "lymph node medulla" EXACT []
synonym: "Medulla of lymph node" EXACT []
xref: FMA:66254 ! Medulla of lymph node
xref: MA:0000745 ! lymph node medulla
is_a: UBERON:0000958 ! medulla
intersection_of: UBERON:0000958 ! medulla
intersection_of: part_of UBERON:0000029 ! lymph node
relationship: part_of UBERON:0000029 ! lymph node

[Term]
id: UBERON:0002008
name: cardiac nerve plexus
alt_id: UBERON:FMA_6628-MA_0001138
def: "a plexus of nerves situated at the base of the heart that innervate the heart." [Wikipedia:Cardiac_plexus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Cardiac nerve plexus" EXACT []
synonym: "Cardiac plexus" EXACT []
synonym: "cardiac plexus" EXACT []
xref: FMA:6628 ! Cardiac nerve plexus
xref: MA:0001138 ! cardiac nerve plexus
is_a: UBERON:0001816 ! autonomic nerve plexus
intersection_of: UBERON:0001816 ! autonomic nerve plexus
intersection_of: part_of UBERON:0000948 ! heart
xref: ncithesaurus:Cardiac_Nerve_Plexus ! Cardiac Nerve Plexus

[Term]
id: UBERON:0002009
name: pulmonary nerve plexus
alt_id: UBERON:FMA_6629-MA_0001143
def: "." [Wikipedia:Pulmonary_plexus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Pulmonary nerve plexus" EXACT []
synonym: "Pulmonary plexus" EXACT []
synonym: "pulmonary plexus" EXACT []
xref: FMA:6629 ! Pulmonary nerve plexus
xref: MA:0001143 ! pulmonary nerve plexus
is_a: UBERON:0001816 ! autonomic nerve plexus
relationship: part_of UBERON:0000477 ! anatomical cluster

[Term]
id: UBERON:0002010
name: celiac nerve plexus
alt_id: UBERON:FMA_6630-MA_0001139
def: "." [Wikipedia:Celiac_plexus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Celiac nerve plexus" EXACT []
synonym: "Celiac plexus" EXACT []
synonym: "celiac plexus" EXACT []
synonym: "Coeliac nerve plexus" EXACT []
synonym: "coeliac nerve plexus" RELATED []
synonym: "Coeliac plexus" EXACT []
synonym: "coeliac plexus" EXACT []
xref: FMA:6630 ! Celiac nerve plexus
xref: GAID:796 ! celiac plexus
xref: MA:0001139 ! celiac nerve plexus
is_a: UBERON:0001816 ! autonomic nerve plexus

[Term]
id: UBERON:0002011
name: thoracodorsal artery
alt_id: UBERON:FMA_66320-MA_0002065
def: "." [Wikipedia:Thoracodorsal_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Thoracodorsal artery" EXACT []
xref: FMA:66320 ! Thoracodorsal artery
xref: MA:0002065 ! thoracodorsal artery
is_a: UBERON:0001637 ! artery
xref: ncithesaurus:Thoracodorsal_Artery ! Thoracodorsal Artery

[Term]
id: UBERON:0002012
name: pulmonary artery
alt_id: UBERON:FMA_66326-MA_0002031
def: "." [Wikipedia:Pulmonary_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Pulmonary arterial tree" EXACT []
synonym: "pulmonary arterial tree" EXACT []
synonym: "Pulmonary arterial tree organ part" EXACT []
synonym: "pulmonary arterial tree organ part" EXACT []
synonym: "Pulmonary artery" EXACT []
xref: BTO:0000778
xref: EHDAA:4351 ! pulmonary artery
xref: FMA:66326 ! Pulmonary artery
xref: GAID:505 ! pulmonary artery
xref: HOG:0000982 ! pulmonary artery
xref: MA:0002031 ! pulmonary artery
xref: OpenCyc:Mx4rvVjbIpwpEbGdrcN5Y29ycA
is_a: UBERON:0001637 ! artery
xref: ncithesaurus:Pulmonary_Artery ! Pulmonary Artery

[Term]
id: UBERON:0002013
name: superior hypogastric nerve plexus
alt_id: UBERON:FMA_6642-MA_0001142
def: "." [Wikipedia:Superior_hypogastric_plexus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Presacral nerve" EXACT []
synonym: "presacral nerve" EXACT []
synonym: "Superior hypogastric nerve plexus" EXACT []
synonym: "Superior hypogastric plexus" EXACT []
synonym: "superior hypogastric plexus" EXACT []
xref: FMA:6642 ! Superior hypogastric nerve plexus
xref: MA:0001142 ! superior hypogastric nerve plexus
is_a: UBERON:0001816 ! autonomic nerve plexus
relationship: part_of UBERON:0001816 ! autonomic nerve plexus

[Term]
id: UBERON:0002014
name: inferior hypogastric nerve plexus
alt_id: UBERON:FMA_6643-MA_0001141
def: "." [Wikipedia:Inferior_hypogastric_plexus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Inferior hypogastric nerve plexus" EXACT []
synonym: "Inferior hypogastric plexus" EXACT []
synonym: "inferior hypogastric plexus" EXACT []
synonym: "Pelvic nerve plexus" EXACT []
synonym: "pelvic nerve plexus" EXACT []
synonym: "Pelvic plexus" EXACT []
synonym: "pelvic plexus" EXACT []
xref: FMA:6643 ! Inferior hypogastric nerve plexus
xref: MA:0001141 ! inferior hypogastric nerve plexus
is_a: UBERON:0001816 ! autonomic nerve plexus
relationship: part_of UBERON:0001816 ! autonomic nerve plexus
xref: ncithesaurus:Inferior_Hypogastric_Nerve_Plexus ! Inferior Hypogastric Nerve Plexus

[Term]
id: UBERON:0002015
name: fibrous capsule of kidney
alt_id: UBERON:FMA_66610-MA_0000370
def: "." [Wikipedia:Kidney_capsule]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Capsule of kidney" EXACT []
synonym: "capsule of kidney" EXACT []
synonym: "Fibrous capsule of kidney" EXACT []
synonym: "kidney capsule" EXACT []
synonym: "renal capsule" RELATED []
xref: FMA:66610 ! Fibrous capsule of kidney
xref: galen:CapsuleOfKidney
xref: MA:0000370 ! kidney capsule
is_a: UBERON:0002384 ! connective tissue
relationship: part_of UBERON:0002113 ! kidney

[Term]
id: UBERON:0002016
name: pulmonary vein
alt_id: UBERON:FMA_66643-MA_0002206-XAO_0000394
def: "Pulmonary veins are blood vessels that transport blood from the lungs to the heart[GO]." [Wikipedia:Pulmonary_vein]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Pulmonary vein" EXACT []
synonym: "Pulmonary venous tree organ part" EXACT []
synonym: "pulmonary venous tree organ part" EXACT []
xref: EHDAA:2629 ! pulmonary veins
xref: FMA:66643 ! Pulmonary vein
xref: GAID:543 ! pulmonary vein
xref: HOG:0001133 ! pulmonary vein
xref: MA:0002206 ! pulmonary vein
xref: XAO:0000394 ! pulmonary vein
is_a: UBERON:0001638 ! vein
xref: ncithesaurus:Pulmonary_Vein ! Pulmonary Vein
xref: BTO:0001799 ! pulmonary vein

[Term]
id: UBERON:0002017
name: portal vein
alt_id: UBERON:FMA_66645-MA_0002198-XAO_0000392
def: "." [Wikipedia:Portal_vein]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Portal vein" EXACT []
synonym: "Portal venous tree organ part" EXACT []
synonym: "portal venous tree organ part" EXACT []
xref: EHDAA:6510 ! portal vein
xref: FMA:66645 ! Portal vein
xref: GAID:540 ! portal vein
xref: HOG:0000656 ! portal vein
xref: MA:0002198 ! portal vein
xref: OpenCyc:Mx4rv_bem5wpEbGdrcN5Y29ycA
xref: XAO:0000392 ! portal vein
is_a: UBERON:0001638 ! vein
xref: ncithesaurus:Portal_Vein ! Portal Vein
xref: BTO:0001792 ! portal vein

[Term]
id: UBERON:0002018
name: synovial membrane
alt_id: UBERON:FMA_66762-MA_0000114
def: "Soft tissue that lines the non-cartilaginous surfaces within joints with cavities (synovial joints)." [Wikipedia:Synovial_membrane]
comment: TODO - check membrane vs sheath
subset: uberon_slim
synonym: "Synovial layer" EXACT []
synonym: "synovial layer" EXACT []
synonym: "Synovial membrane" EXACT []
synonym: "synovial sheath" RELATED []
synonym: "synovium" EXACT []
xref: FMA:66762 ! Synovial membrane
xref: GAID:264 ! synovial membrane
xref: HOG:0001282 ! synovium
xref: MA:0000114 ! synovium
is_a: UBERON:0000042 ! serous membrane
xref: ncithesaurus:Synovial_Membrane ! Synovial Membrane
xref: BTO:0001823 ! synovium

[Term]
id: UBERON:0002019
name: spinal accessory nerve
alt_id: UBERON:FMA_6720-MA_0001088
def: "In mice, the spinal branch of this motor nerve innervates the trapezius and the sternocleidomastoid muscles. The cranial branch joins the vagus nerve and innervates the same targets as the vagus nerve[GO]." [Wikipedia:Spinal_accessory_nerve]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Accessory nerve" EXACT []
synonym: "accessory nerve" EXACT []
synonym: "Accessory nerve [XI]" EXACT []
synonym: "accessory nerve [xi]" EXACT []
synonym: "accessory XI nerve" EXACT []
synonym: "accessory xi nerve" EXACT []
synonym: "Cervical accessory nerve" EXACT []
synonym: "cervical accessory nerve" EXACT []
synonym: "Spinal accessory nerve" EXACT []
synonym: "Spinal accessory nerve tree" EXACT []
synonym: "spinal accessory nerve tree" EXACT []
synonym: "Spinal part of accessory nerve" EXACT []
synonym: "spinal part of accessory nerve" EXACT []
synonym: "Willis' nerve" EXACT []
synonym: "willis' nerve" EXACT []
xref: FMA:6720 ! Spinal accessory nerve
xref: GAID:825 ! accessory nerve
xref: MA:0001088 ! accessory XI nerve
xref: NIF_GrossAnatomy:birnlex_812 ! Accessory nerve
is_a: UBERON:0001785 ! cranial nerve
xref: ncithesaurus:Accessory_Nerve ! Accessory Nerve

[Term]
id: UBERON:0002020
name: gray matter of neuraxis
alt_id: UBERON:FMA_67242-MA_0001112
def: "Heterogeneous cluster of neural somas in the brain and the spinal cord." [Wikipedia:Gray_matter]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Gray matter" EXACT []
synonym: "gray matter" EXACT []
synonym: "Gray matter of neuraxis" EXACT []
synonym: "Grey matter" EXACT []
synonym: "grey matter" EXACT []
synonym: "Grey substance" EXACT []
synonym: "grey substance" EXACT []
xref: FMA:67242 ! Gray matter of neuraxis
xref: MA:0001112 ! grey matter
is_a: UBERON:0000477 ! anatomical cluster
relationship: part_of UBERON:0001017 ! central nervous system
xref: ZFA:0001681 ! grey matter
xref: ncithesaurus:Gray_Matter ! Gray Matter

[Term]
id: UBERON:0002021
name: occipital lobe
alt_id: UBERON:FMA_67325-MA_0000913-ZFA_0001414
def: "Occipital lobe is the one of five lobes of the cerebral hemisphere which occupies the posterior-most portion of the hemisphere. Anteriorly, it shares an arbitrary border with the parietal lobe and temporal lobe. Medially, it is bounded by the longitudinal cerebral fissure." [Wikipedia:Occipital_lobe]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "basicranial region" RELATED []
synonym: "Occipital cortex" EXACT []
synonym: "occipital cortex" EXACT []
synonym: "Occipital lobe" EXACT []
synonym: "Occipital region" EXACT []
synonym: "occipital region" EXACT []
xref: BTO:0000293
xref: EFO:0000915 ! occipital lobe
xref: FMA:67325 ! Occipital lobe
xref: GAID:678 ! occipital lobe
xref: MA:0000913 ! occipital cortex
xref: MAT:0000507 ! occipital lobe
xref: ncithesaurus:Occipital_Lobe
xref: NIF_GrossAnatomy:birnlex_1136 ! Occipital lobe
xref: OpenCyc:Mx4rv9OFy5wpEbGdrcN5Y29ycA
xref: TAO:0001414 ! occipital region
xref: ZFA:0001414 ! occipital region
is_a: UBERON:0000477 ! anatomical cluster
relationship: adjacent_to UBERON:0001871 ! temporal lobe
relationship: adjacent_to UBERON:0001872 ! parietal lobe
relationship: part_of UBERON:0001703 ! neurocranium
relationship: part_of UBERON:0001950 ! neocortex
relationship: part_of UBERON:0002241 ! chondrocranium

[Term]
id: UBERON:0002022
name: insula
alt_id: UBERON:FMA_67329-MA_0000909
def: "The insula is the one of five lobes of the cerebral hemisphere. It lies in the depths of the lateral fissure and is covered by portions of the frontal, parietal and temporal lobes." [Wikipedia:Insula]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Central lobe" EXACT []
synonym: "central lobe" EXACT []
synonym: "Cortex of island" EXACT []
synonym: "cortex of island" EXACT []
synonym: "Insula" EXACT []
synonym: "Insula lobule" EXACT []
synonym: "insula lobule" EXACT []
synonym: "Insular cortex" EXACT []
synonym: "insular cortex" EXACT []
synonym: "Insular lobe" EXACT []
synonym: "insular lobe" EXACT []
synonym: "Insular region" EXACT []
synonym: "insular region" EXACT []
synonym: "Island of Reil" EXACT []
synonym: "island of reil" EXACT []
xref: BTO:0001105
xref: FMA:67329 ! Insula
xref: MA:0000909 ! insular cortex
xref: NIF_GrossAnatomy:birnlex_1117 ! Insula
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001950 ! neocortex
xref: ncithesaurus:Central_Lobe ! Central Lobe

[Term]
id: UBERON:0002023
name: claustrum
alt_id: UBERON:FMA_67440-MA_0000888
def: "Subdivision located in the telencephalon which is a member of the anatomical set \"Basal ganglia\". The claustrum is made up primarily of cellular neural tissue (gray matter), and is located lateral to the caudate nucleus and external capsule and medial to the insula." [Wikipedia:Claustrum]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Claustrum" EXACT []
synonym: "Dorsal claustrum" EXACT []
synonym: "dorsal claustrum" EXACT []
synonym: "Dorsal portion of claustrum" EXACT []
synonym: "dorsal portion of claustrum" EXACT []
xref: FMA:67440 ! Claustrum
xref: MA:0000888 ! claustrum
xref: NIF_GrossAnatomy:birnlex_1522 ! Claustrum
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001869 ! cerebral hemisphere
relationship: part_of UBERON:0002420 ! basal ganglia
xref: ncithesaurus:Claustrum ! Claustrum

[Term]
id: UBERON:0002024
name: internal carotid nerve plexus
alt_id: UBERON:FMA_67533-MA_0001162
def: "." [Wikipedia:Internal_carotid_nerve_plexus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Internal carotid nerve plexus" EXACT []
synonym: "Internal carotid plexus" EXACT []
synonym: "internal carotid plexus" EXACT []
xref: FMA:67533 ! Internal carotid nerve plexus
xref: MA:0001162 ! internal carotid nerve plexus
is_a: UBERON:0001816 ! autonomic nerve plexus
xref: ncithesaurus:Internal_Carotid_Nerve_Plexus ! Internal Carotid Nerve Plexus

[Term]
id: UBERON:0002025
name: basal cell layer of epidermis
alt_id: UBERON:FMA_67540-MA_0000803
def: "." [Wikipedia:Stratum_germinativum]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Basal cell layer of epidermis" EXACT []
synonym: "epidermis basal layer" RELATED []
synonym: "epidermis stratum basale" EXACT []
synonym: "epidermis stratum germinativum" RELATED []
synonym: "Stratum basale of epidermis" EXACT []
synonym: "stratum basale of epidermis" EXACT []
synonym: "Stratum basalis of epidermis" EXACT []
synonym: "stratum basalis of epidermis" EXACT []
synonym: "Stratum germinativum" EXACT []
synonym: "stratum germinativum" EXACT []
xref: BTO:0000438
xref: FMA:67540 ! Basal cell layer of epidermis
xref: MA:0000803 ! epidermis stratum basale
is_a: UBERON:0000119 ! cell layer
relationship: part_of UBERON:0001003 ! epidermis

[Term]
id: UBERON:0002026
name: prickle cell layer of epidermis
alt_id: UBERON:FMA_67542-MA_0000807
comment: This class was created automatically from a combination of ontologies
synonym: "epidermis prickle cell layer" RELATED []
synonym: "epidermis stratum spinosum" EXACT []
synonym: "Prickle cell layer of epidermis" EXACT []
synonym: "Squamous cell layer of epidermis" EXACT []
synonym: "squamous cell layer of epidermis" EXACT []
synonym: "Stratum Malphighii" EXACT []
synonym: "stratum malphighii" EXACT []
synonym: "Stratum spinosum of epidermis" EXACT []
synonym: "stratum spinosum of epidermis" EXACT []
xref: FMA:67542 ! Prickle cell layer of epidermis
xref: MA:0000807 ! epidermis stratum spinosum
is_a: UBERON:0000061 ! anatomical structure
relationship: part_of UBERON:0001003 ! epidermis

[Term]
id: UBERON:0002027
name: horny layer of epidermis
alt_id: UBERON:FMA_67545-MA_0000804
comment: This class was created automatically from a combination of ontologies
synonym: "epidermis stratum corneum" EXACT []
synonym: "Horny layer of epidermis" EXACT []
synonym: "Stratum corneum of epidermis" EXACT []
synonym: "stratum corneum of epidermis" EXACT []
xref: FMA:67545 ! Horny layer of epidermis
xref: MA:0000804 ! epidermis stratum corneum
is_a: UBERON:0000061 ! anatomical structure
relationship: part_of UBERON:0001003 ! epidermis

[Term]
id: UBERON:0002028
name: hindbrain
alt_id: UBERON:FMA_67687-MA_0000195-MIAA_0000107-XAO_0000015-ZFA_0000029
def: "Organ component of neuraxis that has as its parts the pons, cerebellum and medulla oblongata . Examples: There is only one hindbrain. // The most posterior of the three principal regions of the brain, forming the rhombencephalon and all or most of the metencephalon. <a href='http://zfin.org/cgi-bin/ZFIN_jump?record=ZDB-PUB-961014-576'>Kimmel et al, 1995.</a>" [Wikipedia:Hindbrain, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Hindbrain" EXACT []
synonym: "rhombencephalon" RELATED []
xref: BTO:0000672
xref: EFO:0000923 ! hindbrain
xref: EHDAA:3514 ! hindbrain
xref: EHDAA:6487 ! hindbrain
xref: FMA:67687 ! Hindbrain
xref: HOG:0000070 ! hindbrain
xref: MA:0000195 ! hindbrain
xref: MAT:0000107 ! hindbrain
xref: MIAA:0000107 ! hindbrain
xref: NIF_GrossAnatomy:birnlex_942 ! Hindbrain
xref: TAO:0000029 ! hindbrain
xref: XAO:0000015 ! hindbrain
xref: ZFA:0000029 ! hindbrain
is_a: UBERON:0002616 ! regional part of brain
relationship: develops_from UBERON:0003076 ! posterior neural tube
relationship: part_of UBERON:0000955 ! brain

[Term]
id: UBERON:0002029
name: epithelium of gall bladder
alt_id: UBERON:FMA_67711-MA_0001632
comment: This class was created automatically from a combination of ontologies
synonym: "biliary epithelium" RELATED []
synonym: "Epithelium of gall bladder" EXACT []
synonym: "Gall bladder epithelium" EXACT []
synonym: "gall bladder epithelium" EXACT []
xref: FMA:67711 ! Epithelium of gall bladder
xref: MA:0001632 ! gall bladder epithelium
is_a: UBERON:0000485 ! simple columnar epithelium
intersection_of: UBERON:0000483 ! epithelium
intersection_of: part_of UBERON:0002110 ! gallbladder
relationship: part_of UBERON:0002110 ! gallbladder
xref: BTO:0001449 ! gall bladder epithelium

[Term]
id: UBERON:0002030
name: nipple
alt_id: UBERON:FMA_67771-MA_0000796
def: "Projection of skin containing the outlets for 15-20 lactiferous ducts arranged cylindrically around the tip." [Wikipedia:Nipple]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Nipple" EXACT []
synonym: "papilla mammae" EXACT [MP:0009723]
synonym: "papilla of breast" EXACT []
synonym: "Papillary part of breast" EXACT []
synonym: "papillary part of breast" EXACT []
synonym: "Teat" EXACT []
synonym: "teat" EXACT []
synonym: "thele" EXACT [MP:0009723]
synonym: "thelium" EXACT [MP:0009723]
xref: BTO:0000821
xref: FMA:67771 ! Nipple
xref: GAID:35 ! nipple
xref: MA:0000796 ! nipple
xref: ncithesaurus:Nipple
xref: OpenCyc:Mx4rvVjKi5wpEbGdrcN5Y29ycA
is_a: UBERON:0000475 ! organism subdivision
relationship: part_of UBERON:0001911 ! lactiferous gland

[Term]
id: UBERON:0002031
name: epithelium of bronchus
alt_id: UBERON:FMA_67782-MA_0001839
comment: This class was created automatically from a combination of ontologies
synonym: "Bronchial epithelium" EXACT []
synonym: "bronchial epithelium" EXACT []
synonym: "bronchus epithelium" EXACT []
synonym: "Epithelium of bronchus" EXACT []
xref: EFO:0000307 ! bronchial epithelium
xref: FMA:67782 ! Epithelium of bronchus
xref: MA:0001839 ! bronchus epithelium
is_a: UBERON:0000485 ! simple columnar epithelium
intersection_of: UBERON:0000483 ! epithelium
intersection_of: part_of UBERON:0002185 ! bronchus
relationship: part_of UBERON:0002185 ! bronchus
xref: ncithesaurus:Bronchial_Epithelium ! Bronchial Epithelium
xref: BTO:0001845 ! bronchial epithelium

[Term]
id: UBERON:0002032
name: areola
alt_id: UBERON:FMA_67796-MA_0000788
def: "Subdivision of breast which consists of skin, connective tissue and smooth muscle bundle and modified sebaceous glands and which surrounds the nipple." [Wikipedia:Areola]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Areola" EXACT []
xref: FMA:67796 ! Areola
xref: MA:0000788 ! areola
xref: ncithesaurus:Areola
is_a: UBERON:0000475 ! organism subdivision
relationship: part_of UBERON:0001911 ! lactiferous gland

[Term]
id: UBERON:0002033
name: arrector muscle of hair
alt_id: UBERON:FMA_67821-MA_0000778
def: "tiny muscle fiber attached to each hair follicle, which contract to make the hairs stand on end, causing goose bumps. They exist in most mammals including humans." [http://en.wikipedia.org/wiki/Arrector_pili, Wikipedia:Arrector_pili]
subset: uberon_slim
synonym: "arrector pili" EXACT [FMA:67821, MA:0000778]
xref: FMA:67821 ! Arrector muscle of hair
xref: MA:0000778 ! arrector pili smooth muscle
is_a: UBERON:0001135 ! smooth muscle tissue
relationship: attached_to UBERON:0002073 ! hair follicle

[Term]
id: UBERON:0002034
name: suprachiasmatic nucleus
alt_id: UBERON:FMA_67883-MA_0000843-ZFA_0000441
def: "." [Wikipedia:Suprachiasmatic_nucleus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Suprachiasmatic nucleus" EXACT []
synonym: "Suprachiasmatic nucleus of hypothalamus" EXACT []
synonym: "suprachiasmatic nucleus of hypothalamus" EXACT []
xref: FMA:67883 ! Suprachiasmatic nucleus
xref: GAID:645 ! suprachiasmatic nucleu
xref: HOG:0000036 ! suprachiasmatic nucleus
xref: MA:0000843 ! suprachiasmatic nucleus
xref: NIF_GrossAnatomy:birnlex_1325 ! Suprachiasmatic nucleus
xref: TAO:0000441 ! suprachiasmatic nucleus
xref: ZFA:0000441 ! suprachiasmatic nucleus
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0002272 ! medial zone of hypothalamus
xref: ncithesaurus:Suprachiasmatic_Nucleus ! Suprachiasmatic Nucleus
xref: BTO:0001822 ! suprachiasmatic nucleus

[Term]
id: UBERON:0002035
name: medial preoptic nucleus
alt_id: UBERON:FMA_67890-MA_0000840
def: "." [Wikipedia:Medial_preoptic_nucleus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Medial preoptic area" EXACT []
synonym: "medial preoptic area" EXACT []
synonym: "Medial preoptic hypothalamic nucleus" EXACT []
synonym: "medial preoptic hypothalamic nucleus" EXACT []
synonym: "Medial preoptic nucleus" EXACT []
xref: FMA:67890 ! Medial preoptic nucleus
xref: MA:0000840 ! medial preoptic nucleus
xref: NIF_GrossAnatomy:birnlex_706 ! Medial preoptic nucleus
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0001928 ! preoptic area

[Term]
id: UBERON:0002036
name: striated muscle tissue
alt_id: UBERON:FMA_67905-MA_0002438
def: "Tissue which consists of striated muscle fibers surrounded by endomysium. Examples: Skeletal muscle tissue, Cardiac muscle tissue[FMA]." [FMA:67905, Wikipedia:Striated_muscle]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "striated muscle" EXACT []
synonym: "Striated muscle tissue" EXACT []
xref: FMA:67905 ! Striated muscle tissue
xref: MA:0002438 ! striated muscle tissue
is_a: UBERON:0002385 ! muscle tissue
xref: ncithesaurus:Striated_Muscle_Tissue ! Striated Muscle Tissue

[Term]
id: UBERON:0002037
name: cerebellum
alt_id: UBERON:FMA_67944-FMA_78469-MA_0000196-MA_0000198-MIAA_0000110-XAO_0003098-XAO_0003099-ZFA_0000100-ZFA_0000110
def: "Organ component of neuraxis that has as its parts the cerebellar cortex, cerebellar nuclear complex and cerebellar white matter. Examples: There is only one cerebellum. // Specialized brain region derived from the dorsal metencephalon (anterior hindbrain, and perhaps including posterior midbrain) and becoming distinctive late in the segmentation period. <a href='http://zfin.org/cgi-bin/ZFIN_jump?record=ZDB-PUB-961014-576'>Kimmel et al, 1995.</a> // Fluid-filled brain cavity. <a href='http://zfin.org/cgi-bin/ZFIN_jump?record=ZDB-PUB-961014-576'>Kimmel et al, 1995.</a>" [Wikipedia:Cerebellum, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Cerebellum" EXACT []
synonym: "Epencephalon-1" EXACT []
synonym: "epencephalon-1" EXACT []
synonym: "hindbrain ventricle" RELATED []
synonym: "rhombencephalic ventricle" RELATED []
synonym: "rhombencephalic vesicle" RELATED []
xref: BTO:0000232
xref: EFO:0000327 ! cerebellum
xref: FMA:67944 ! Cerebellum
xref: GAID:595 ! cerebellum
xref: HOG:0000024 ! cerebellum
xref: MA:0000198 ! cerebellum
xref: MAT:0000110 ! cerebellum
xref: MIAA:0000110 ! cerebellum
xref: NIF_GrossAnatomy:birnlex_1489 ! Cerebellum
xref: TAO:0000100 ! cerebellum
xref: XAO:0003098 ! cerebellum
xref: ZFA:0000100 ! cerebellum
is_a: UBERON:0002616 ! regional part of brain
relationship: part_of UBERON:0001895 ! metencephalon
xref: ncithesaurus:Cerebellum ! Cerebellum

[Term]
id: UBERON:0002038
name: substantia nigra
alt_id: UBERON:FMA_67947-MA_0000210
def: "Subdivision of the midbrain anterior to the midbrain tegmentum which contains darkly pigmented neurons." [Wikipedia:Substantia_nigra]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Nucleus of basis pedunculi" EXACT []
synonym: "nucleus of basis pedunculi" EXACT []
synonym: "Soemmering's substance" EXACT []
synonym: "soemmering's substance" EXACT []
synonym: "Substantia nigra" EXACT []
xref: BTO:0000143
xref: EFO:0000922 ! substantia nigra
xref: FMA:67947 ! Substantia nigra
xref: GAID:581 ! substantia nigra
xref: MA:0000210 ! substantia nigra
xref: MAT:0000504 ! substantia nigra
xref: NIF_GrossAnatomy:birnlex_789 ! Substantia nigra
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0001891 ! midbrain
relationship: part_of UBERON:0001900 ! subthalamus
xref: ncithesaurus:Substantia_Nigra ! Substantia Nigra

[Term]
id: UBERON:0002039
name: inferior phrenic vein
alt_id: UBERON:FMA_68068-MA_0002195
def: "." [Wikipedia:Inferior_phrenic_vein]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Inferior phrenic vein" EXACT []
xref: FMA:68068 ! Inferior phrenic vein
xref: MA:0002195 ! inferior phrenic vein
is_a: UBERON:0001638 ! vein

[Term]
id: UBERON:0002040
name: bronchial artery
alt_id: UBERON:FMA_68109-MA_0001923
def: "." [Wikipedia:Bronchial_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Bronchial arterial tree" EXACT []
synonym: "bronchial arterial tree" EXACT []
synonym: "Bronchial artery" EXACT []
xref: FMA:68109 ! Bronchial artery
xref: GAID:477 ! bronchial artery
xref: MA:0001923 ! bronchial artery
xref: OpenCyc:Mx4r4sy0UiNbEd2AAAACs6hRXg
is_a: UBERON:0001637 ! artery
xref: ncithesaurus:Bronchial_Artery ! Bronchial Artery

[Term]
id: UBERON:0002041
name: terminal bronchus
alt_id: UBERON:FMA_68416-MA_0000440
comment: This class was created automatically from a combination of ontologies
synonym: "Terminal bronchus" EXACT []
xref: FMA:68416 ! Terminal bronchus
xref: MA:0000440 ! terminal bronchus
is_a: UBERON:0002185 ! bronchus

[Term]
id: UBERON:0002042
name: endothelium of lymphatic vessel
alt_id: UBERON:FMA_68444-MA_0000750
comment: This class was created automatically from a combination of ontologies
synonym: "Endothelium of lymphatic vessel" EXACT []
synonym: "Lymphatic vessel endothelium" EXACT []
synonym: "lymphatic vessel endothelium" EXACT []
xref: FMA:68444 ! Endothelium of lymphatic vessel
xref: MA:0000750 ! lymphatic vessel endothelium
is_a: UBERON:0001986 ! endothelium
intersection_of: UBERON:0001986 ! endothelium
intersection_of: part_of UBERON:0001473 ! lymphatic vessel
relationship: part_of UBERON:0001473 ! lymphatic vessel
xref: ncithesaurus:Lymphatic_Vessel_Endothelium ! Lymphatic Vessel Endothelium

[Term]
id: UBERON:0002043
name: dorsal raphe nucleus
alt_id: UBERON:FMA_68462-ZFA_0000366
def: "." [Wikipedia:Dorsal_raphe_nucleus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Cell group B7" EXACT []
synonym: "cell group b7" EXACT []
synonym: "Dorsal nucleus of the raphe" EXACT []
synonym: "dorsal nucleus of the raphe" EXACT []
synonym: "Dorsal nucleus raphe" EXACT []
synonym: "dorsal nucleus raphe" EXACT []
synonym: "Dorsal raphe nucleus" EXACT []
synonym: "inferior raphe nucleus" EXACT []
synonym: "Posterior raphe nucleus" EXACT []
synonym: "posterior raphe nucleus" RELATED []
xref: FMA:68462 ! Dorsal raphe nucleus
xref: NIF_GrossAnatomy:birnlex_982 ! Dorsal raphe nucleus
xref: TAO:0000366 ! inferior raphe nucleus
xref: ZFA:0000366 ! inferior raphe nucleus
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0001943 ! midbrain tegmentum
xref: BTO:0002434 ! dorsal raphe nucleus

[Term]
id: UBERON:0002044
name: ventral nucleus of posterior commissure
alt_id: UBERON:FMA_68464-MA_0001072
comment: This class was created automatically from a combination of ontologies
synonym: "Darkshevich's nucleus" EXACT []
synonym: "darkshevich's nucleus" EXACT []
synonym: "Nucleus of Darkschewitsch" EXACT []
synonym: "nucleus of darkschewitsch" EXACT []
synonym: "Ventral nucleus of posterior commissure" EXACT []
xref: FMA:68464 ! Ventral nucleus of posterior commissure
xref: MA:0001072 ! nucleus of darkschewitsch
xref: NIF_GrossAnatomy:birnlex_896 ! Nucleus of Darkschewitsch
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0001943 ! midbrain tegmentum

[Term]
id: UBERON:0002045
name: cuneate nucleus
alt_id: UBERON:FMA_68465-MA_0001035
def: "." [Wikipedia:Cuneate_nucleus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Burdach's nucleus" EXACT []
synonym: "burdach's nucleus" EXACT []
synonym: "Cuneate nucleus" EXACT []
xref: FMA:68465 ! Cuneate nucleus
xref: MA:0001035 ! cuneate nucleus
xref: NIF_GrossAnatomy:birnlex_2640 ! Cuneate nucleus
is_a: UBERON:0002308 ! nucleus of brain
xref: ncithesaurus:Cuneate_Nucleus ! Cuneate Nucleus

[Term]
id: UBERON:0002046
name: thyroid follicle
alt_id: UBERON:FMA_68805-FMA_9603-MA_0000129-MA_0000726-MIAA_0000081-XAO_0000162-ZFA_0001072
def: "Lobular organ the parenchyma of which consists of ductless, glandular follicles filled with colloid. Examples: thyroid gland proper, accessory thyroid gland, lingual thyroid gland." [Wikipedia:Thyroid_follicle]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "thyroid" EXACT []
synonym: "Thyroid follicle" EXACT []
synonym: "Thyroid gland" EXACT []
synonym: "thyroid gland" EXACT []
synonym: "thyroid gland follicle" EXACT []
synonym: "thyroid primordium" BROAD []
xref: BTO:0001379
xref: EFO:0000861 ! thyroid
xref: EHDAA:2148 ! thyroid
xref: EHDAA:2975 ! thyroid
xref: FMA:68805 ! Thyroid follicle
xref: FMA:9603 ! Thyroid gland
xref: GAID:465 ! thyroid gland
xref: HOG:0000418 ! thyroid
xref: MA:0000129 ! thyroid gland
xref: MA:0000726 ! thyroid gland follicle
xref: MAT:0000081 ! thyroid
xref: MIAA:0000081 ! thyroid
xref: ncithesaurus:Thyroid_Gland
xref: OpenCyc:Mx4rvVjLT5wpEbGdrcN5Y29ycA
xref: TAO:0001072 ! thyroid follicle
xref: XAO:0000162 ! thyroid
xref: ZFA:0001072 ! thyroid follicle
is_a: UBERON:0002530 ! gland
relationship: develops_from UBERON:0003091 ! thyroid primordium
relationship: part_of UBERON:0000949 ! endocrine system

[Term]
id: UBERON:0002047
name: pontine raphe nucleus
alt_id: UBERON:FMA_68875-MA_0001022
def: "." [Wikipedia:Pontine_raphe_nucleus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Pontine raphe nucleus" EXACT []
synonym: "Raphe of pons" EXACT []
synonym: "raphe of pons" EXACT []
synonym: "Raphe pontis nucleus" EXACT []
synonym: "raphe pontis nucleus" RELATED []
xref: FMA:68875 ! Pontine raphe nucleus
xref: MA:0001022 ! pontine raphe nucleus
xref: NIF_GrossAnatomy:birnlex_1110 ! Pontine raphe nucleus
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0000988 ! pons

[Term]
id: UBERON:0002048
name: lung
alt_id: UBERON:FMA_68877-FMA_7195-MA_0000415-MIAA_0000135-XAO_0000119
def: "Lobular organ the parenchyma of which consists of air-filled alveoli which communicate with the tracheobronchial tree. Examples: There are only two instances, right lung and left lung. // Saccular thoracic organ that constitutes the basic respiratory organ." [BTO:0000763, Wikipedia:Lung]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
xref: AAO:0000275 ! lungs
xref: BTO:0000763
xref: EHDAA:1554 ! lung
xref: EHDAA:2205 ! lung
xref: FMA:7195 ! Lung
xref: GAID:345 ! lung
xref: MA:0000415 ! lung
xref: MAT:0000135 ! lung
xref: MIAA:0000135 ! lung
xref: OpenCyc:Mx4rvVjKy5wpEbGdrcN5Y29ycA
xref: XAO:0000119 ! lung
is_a: UBERON:0000171 ! respiration organ
relationship: develops_from UBERON:0000118 ! lung bud
relationship: part_of UBERON:0002224 ! thoracic cavity
xref: ncithesaurus:Lung ! Lung

[Term]
id: UBERON:0002049
name: vasculature
alt_id: UBERON:FMA_69050-XAO_0001010-ZFA_0001079
def: "Anatomical system that has as its parts the blood and lymph vessels." [Wikipedia:Vasculature, XB:curator]
comment: This class was created automatically from a combination of ontologies.
subset: uberon_slim
synonym: "Vascular network" EXACT []
synonym: "vascular network" EXACT []
synonym: "Vasculature" EXACT []
xref: FMA:69050 ! Vasculature
xref: TAO:0001079 ! vasculature
xref: XAO:0001010 ! circulatory system
xref: ZFA:0001079 ! vasculature
is_a: UBERON:0000477 ! anatomical cluster
xref: BTO:0003718 ! vasculature

[Term]
id: UBERON:0002050
name: embryonic structure
alt_id: UBERON:FMA_69067-XAO_0003042-ZFA_0001105
def: "An anatomical structure that exists only before the organism is fully formed. // Anatomical structure that is part of the embryo and is comprised of portions of tissue or cells." [BTO:0000174, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
synonym: "developing structure" RELATED []
synonym: "Embryonic structure" EXACT []
xref: AAO:0000138 ! embryonic_structure
xref: BILA:0000034
xref: BTO:0000174
xref: EFO:0000461 ! embryonic structure
xref: FMA:69067 ! Embryonic structure
xref: GAID:407 ! embryonic structure
xref: TAO:0001105 ! embryonic structure
xref: XAO:0003042 ! embryonic structure
xref: ZFA:0001105 ! embryonic structure
is_a: UBERON:0000061 ! anatomical structure
intersection_of: UBERON:0000061 ! anatomical structure
intersection_of: existence_ends_during UBERON:0000068 ! embryo stage
intersection_of: part_of UBERON:0000922 ! embryo
xref: ncithesaurus:Embryonic_Structure ! Embryonic Structure

[Term]
id: UBERON:0002051
name: epithelium of bronchiole
alt_id: UBERON:FMA_69077-MA_0001772
comment: This class was created automatically from a combination of ontologies
synonym: "Bronchiole epithelium" EXACT []
synonym: "bronchiole epithelium" EXACT []
synonym: "Epithelium of bronchiole" EXACT []
xref: FMA:69077 ! Epithelium of bronchiole
xref: MA:0001772 ! bronchiole epithelium
is_a: UBERON:0000485 ! simple columnar epithelium
intersection_of: UBERON:0000483 ! epithelium
intersection_of: part_of UBERON:0002186 ! bronchiole
relationship: part_of UBERON:0002186 ! bronchiole
xref: FMA:62497 ! Epithelium of lobular bronchiole
xref: ncithesaurus:Bronchiole_Epithelium ! Bronchiole Epithelium

[Term]
id: UBERON:0002052
name: capsule of adrenal gland
alt_id: UBERON:FMA_69087-MA_0000117
comment: This class was created automatically from a combination of ontologies
synonym: "Adrenal gland capsule" EXACT []
synonym: "adrenal gland capsule" EXACT []
synonym: "Capsule of adrenal gland" EXACT []
xref: FMA:69087 ! Capsule of adrenal gland
xref: MA:0000117 ! adrenal gland capsule
is_a: UBERON:0003893 ! capsule
relationship: part_of UBERON:0002369 ! adrenal gland
xref: ncithesaurus:Adrenal_Gland_Capsule ! Adrenal Gland Capsule

[Term]
id: UBERON:0002053
name: zona glomerulosa of adrenal gland
alt_id: UBERON:FMA_69225-MA_0001891
def: "." [Wikipedia:Zona_glomerulosa]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "adrenal gland zona glomerulosa" EXACT []
synonym: "Zona glomerulosa" EXACT []
synonym: "zona glomerulosa" EXACT []
synonym: "Zona glomerulosa of adrenal gland" EXACT []
synonym: "Zona glomerulosa of suprarenal gland" EXACT []
synonym: "zona glomerulosa of suprarenal gland" EXACT []
xref: BTO:0000048
xref: FMA:69225 ! Zona glomerulosa of adrenal gland
xref: GAID:449 ! zona glomerulosa
xref: MA:0001891 ! adrenal gland zona glomerulosa
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001235 ! adrenal cortex

[Term]
id: UBERON:0002054
name: zona fasciculata of adrenal gland
alt_id: UBERON:FMA_69234-MA_0001890
def: "." [Wikipedia:Zona_fasciculata]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "adrenal gland zona fasciculata" EXACT []
synonym: "Zona fasciculata" EXACT []
synonym: "zona fasciculata" EXACT []
synonym: "Zona fasciculata of adrenal gland" EXACT []
synonym: "Zona fasciculata of suprarenal gland" EXACT []
synonym: "zona fasciculata of suprarenal gland" EXACT []
xref: BTO:0000050
xref: FMA:69234 ! Zona fasciculata of adrenal gland
xref: GAID:448 ! zona fasciculata
xref: MA:0001890 ! adrenal gland zona fasciculata
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001235 ! adrenal cortex

[Term]
id: UBERON:0002055
name: zona reticularis of adrenal gland
alt_id: UBERON:FMA_69236-MA_0001892
def: "." [Wikipedia:Zona_reticularis]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "adrenal gland zona reticularis" EXACT []
synonym: "Zona reticularis" EXACT []
synonym: "zona reticularis" EXACT []
synonym: "Zona reticularis of adrenal gland" EXACT []
synonym: "Zona reticularis of suprarenal gland" EXACT []
synonym: "zona reticularis of suprarenal gland" EXACT []
xref: FMA:69236 ! Zona reticularis of adrenal gland
xref: GAID:450 ! zona reticularis
xref: MA:0001892 ! adrenal gland zona reticularis
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001235 ! adrenal cortex

[Term]
id: UBERON:0002056
name: inferior suprarenal artery
alt_id: UBERON:FMA_69264-MA_0002056
def: "." [Wikipedia:Inferior_suprarenal_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Inferior suprarenal artery" EXACT []
xref: FMA:69264 ! Inferior suprarenal artery
xref: MA:0002056 ! inferior suprarenal artery
is_a: UBERON:0001637 ! artery
xref: ncithesaurus:Inferior_Suprarenal_Artery ! Inferior Suprarenal Artery

[Term]
id: UBERON:0002057
name: phrenic artery
alt_id: UBERON:FMA_69330-MA_0002019
def: "." [Wikipedia:Phrenic_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Phrenic artery" EXACT []
xref: FMA:69330 ! Phrenic artery
xref: MA:0002019 ! phrenic artery
is_a: UBERON:0001637 ! artery
xref: ncithesaurus:Phrenic_Artery ! Phrenic Artery

[Term]
id: UBERON:0002058
name: ciliary ganglion
alt_id: UBERON:FMA_6964-MA_0001136
def: "." [Wikipedia:Ciliary_ganglion]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Ciliary ganglion" EXACT []
xref: FMA:6964 ! Ciliary ganglion
xref: HOG:0000805 ! ciliary ganglion
xref: MA:0001136 ! ciliary ganglion
is_a: UBERON:0001808 ! parasympathetic ganglion

[Term]
id: UBERON:0002059
name: submandibular ganglion
alt_id: UBERON:FMA_6966-MA_0002470
def: "." [Wikipedia:Submandibular_ganglion]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Submandibular ganglion" EXACT []
xref: BTO:0001318
xref: FMA:6966 ! Submandibular ganglion
xref: MA:0002470 ! submandibular ganglion
is_a: UBERON:0001808 ! parasympathetic ganglion
xref: ncithesaurus:Submandibular_Ganglion ! Submandibular Ganglion

[Term]
id: UBERON:0002060
name: femoral artery
alt_id: UBERON:FMA_70248-MA_0001951
def: "." [Wikipedia:Femoral_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Femoral artery" EXACT []
xref: FMA:70248 ! Femoral artery
xref: GAID:494 ! femoral artery
xref: galen:FemoralArtery
xref: MA:0001951 ! femoral artery
is_a: UBERON:0001637 ! artery
xref: ncithesaurus:Femoral_Artery ! Femoral Artery
xref: BTO:0001624 ! femoral artery

[Term]
id: UBERON:0002061
name: truncus arteriosus
alt_id: UBERON:FMA_70301-MA_0000103
def: "." [Wikipedia:Truncus_arteriosus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Truncus arteriosus" EXACT []
xref: FMA:70301 ! Truncus arteriosus
xref: GAID:554 ! truncus arteriosus
xref: MA:0000103 ! truncus arteriosus
xref: OpenCyc:Mx4rquH9YKgNEdudWQACs5b6Bw
is_a: UBERON:0002050 ! embryonic structure

[Term]
id: UBERON:0002062
name: endocardial cushion
alt_id: UBERON:FMA_70302-MA_0000078-ZFA_0001317
def: "Swellings of tissue present between the endocardial and myocardial cell layers that will give rise to the interstitial cells of the cardiac valves." [Wikipedia:Endocardial_cushion, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Endocardial cushion" EXACT []
synonym: "endocardial cushions" RELATED []
xref: FMA:70302 ! Endocardial cushion
xref: HOG:0000932 ! endocardial cushion
xref: MA:0000078 ! endocardial cushion
xref: TAO:0001317 ! endocardial cushion
xref: ZFA:0001317 ! endocardial cushion
is_a: UBERON:0002050 ! embryonic structure
relationship: develops_from UBERON:0000479 ! portion of tissue
relationship: part_of UBERON:0000948 ! heart

[Term]
id: UBERON:0002063
name: sinus venosus
alt_id: UBERON:FMA_70303-ZFA_0000154
def: "a large quadrangular cavity which precedes the atrium on the venous side of the chordate heart. In humans, it exists distinctly only in the embryonic heart, where it is found between the two venae cavae. In the adult, it is incorporated into the wall of the right atrium to form a smooth part called the sinus venarum, also known as the venarum sinus, which is separated from the rest of the atrium by a ridge of fibres called the crista terminalis[Wikipedia]. Heart region collecting blood from the paired common cardinal veins and delivering to the atrium. One of four heart chambers, the sinus venosus also acts as a pacemaker and is the first to contract. <a href='http://zfin.org/cgi-bin/ZFIN_jump?record=ZDB-PUB-961014-576'>Kimmel et al, 1995.</a>" [Wikipedia:Sinus_venosus, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Sinus venosus" EXACT []
xref: EHDAA:480 ! sinus venosus
xref: FMA:70303 ! Sinus venosus
xref: HOG:0000177 ! sinus venosus
xref: TAO:0000154 ! sinus venosus
xref: ZFA:0000154 ! sinus venosus
is_a: UBERON:0002050 ! embryonic structure
relationship: part_of UBERON:0000948 ! heart
xref: ncithesaurus:Sinus_Venosus ! Sinus Venosus

[Term]
id: UBERON:0002064
name: common cardinal vein
alt_id: UBERON:FMA_70308-ZFA_0000186
def: "Bilaterally paired longitudinal vein; the anterior cardinal returns blood from the head, and the posterior cardinal returns it from the trunk; these two vessels join together on each side as the common cardinal vein (duct of Cuvier; misnamed the vitelline vein) that leads across the yolk cell to the heart's sinus venosus. <a href='http://zfin.org/cgi-bin/ZFIN_jump?record=ZDB-PUB-961014-576'>Kimmel et al, 1995.</a>" [Wikipedia:Common_cardinal_vein, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Common cardinal vein" EXACT []
synonym: "duct of Cuvier" RELATED []
xref: FMA:70308 ! Common cardinal vein
xref: HOG:0000112 ! common cardinal vein
xref: TAO:0000186 ! common cardinal vein
xref: ZFA:0000186 ! common cardinal vein
is_a: UBERON:0001638 ! vein
relationship: part_of UBERON:0002201 ! vasculature of trunk
xref: ncithesaurus:Common_Cardinal_Vein ! Common Cardinal Vein

[Term]
id: UBERON:0002065
name: postcardinal vein
alt_id: UBERON:FMA_70314-ZFA_0000477
def: "Continuation of the caudal vein cranial to the anal pore. The cardinal vein splits into a pair of vessels in the cranial trunk, just caudal to the radix of the aorta. The posterior cardinals each empty into the common cardinal vein. " [ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "axial vein" RELATED []
synonym: "caudal cardinal veins" RELATED []
synonym: "PCV" RELATED []
synonym: "Postcardinal vein" EXACT []
synonym: "posterior cardinal vein" EXACT []
xref: FMA:70314 ! Postcardinal vein
xref: HOG:0000111 ! posterior cardinal vein
xref: TAO:0000477 ! posterior cardinal vein
xref: ZFA:0000477 ! posterior cardinal vein
is_a: UBERON:0001638 ! vein
relationship: part_of UBERON:0002201 ! vasculature of trunk
xref: ncithesaurus:Posterior_Cardinal_Vein ! Posterior Cardinal Vein

[Term]
id: UBERON:0002066
name: umbilical vein
alt_id: UBERON:FMA_70317-MA_0002249
def: "." [Wikipedia:Umbilical_vein]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Umbilical vein" EXACT []
xref: EHDAA:1034 ! umbilical vein
xref: EHDAA:488 ! umbilical vein
xref: FMA:70317 ! Umbilical vein
xref: GAID:542 ! umbilical vein
xref: MA:0002249 ! umbilical vein
xref: OpenCyc:Mx4rdu17MmWaEd2AAABQjYGu0g
is_a: UBERON:0001638 ! vein
xref: ncithesaurus:Umbilical_Vein ! Umbilical Vein
xref: BTO:0001509 ! umbilical vein

[Term]
id: UBERON:0002067
name: dermis
alt_id: UBERON:FMA_70323-MA_0000152-MIAA_0000153-XAO_0000217-ZFA_0001119
def: "Dense irregular connective tissue which consists of a papillary layer and a reticular layer. // A collagenous layer of the skin subjacent to the epidermis and covering the hypodermis. It contains various types of cells (e.g. fibroblasts, pigment cells, nerve, blood vessels and scales. <a href='http://zfin.org/cgi-bin/ZFIN_jump?record=ZDB-PUB-040726-12'>Le Guellec et al, 2004.</a>" [Wikipedia:Dermis, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Dermis" EXACT []
xref: AAO:0000128 ! dermis
xref: BTO:0000294
xref: FMA:70323 ! Dermis
xref: GAID:1321 ! dermis
xref: HOG:0000108 ! dermis
xref: MA:0000152 ! dermis
xref: MAT:0000153 ! dermis
xref: MIAA:0000153 ! dermis
xref: TAO:0001119 ! dermis
xref: XAO:0000217 ! dermis
xref: ZFA:0001119 ! dermis
is_a: UBERON:0000064 ! organ part
relationship: develops_from UBERON:0003104 ! mesenchyme
relationship: part_of UBERON:0002097 ! skin
xref: ncithesaurus:Dermis ! Dermis

[Term]
id: UBERON:0002068
name: urachus
alt_id: UBERON:FMA_70343-MA_0001701
def: "." [Wikipedia:Urachus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Urachus" EXACT []
xref: EHDAA:7016 ! urachus
xref: EHDAA:9332 ! urachus
xref: FMA:70343 ! Urachus
xref: GAID:1313 ! urachus
xref: HOG:0000735 ! urachus
xref: MA:0001701 ! urachus
xref: ncithesaurus:Urachus
is_a: UBERON:0000061 ! anatomical structure
relationship: part_of UBERON:0001255 ! urinary bladder

[Term]
id: UBERON:0002069
name: granular layer of epidermis
alt_id: UBERON:FMA_70344-MA_0000805
comment: This class was created automatically from a combination of ontologies
synonym: "epidermis granular layer" RELATED []
synonym: "epidermis stratum granulosum" EXACT []
synonym: "Granular layer of epidermis" EXACT []
synonym: "Stratum granulosum of epidermis" EXACT []
synonym: "stratum granulosum of epidermis" EXACT []
xref: FMA:70344 ! Granular layer of epidermis
xref: MA:0000805 ! epidermis stratum granulosum
is_a: UBERON:0000061 ! anatomical structure
relationship: part_of UBERON:0001003 ! epidermis

[Term]
id: UBERON:0002070
name: superior pancreaticoduodenal artery
alt_id: UBERON:FMA_70437-MA_0002015
def: "." [Wikipedia:Superior_pancreaticoduodenal_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "superior pancreatico-duodenal artery" EXACT []
synonym: "Superior pancreaticoduodenal artery" EXACT []
xref: FMA:70437 ! Superior pancreaticoduodenal artery
xref: MA:0002015 ! superior pancreatico-duodenal artery
is_a: UBERON:0001637 ! artery
xref: ncithesaurus:Superior_Pancreatico-Duodenal_Artery ! Superior Pancreatico-Duodenal Artery

[Term]
id: UBERON:0002071
name: stratum lucidum of epidermis
alt_id: UBERON:FMA_70540-MA_0000806
comment: This class was created automatically from a combination of ontologies
synonym: "epidermis stratum lucidum" EXACT []
synonym: "Stratum conjunctum of epidermis" EXACT []
synonym: "stratum conjunctum of epidermis" EXACT []
synonym: "Stratum lucidum of epidermis" EXACT []
xref: FMA:70540 ! Stratum lucidum of epidermis
xref: MA:0000806 ! epidermis stratum lucidum
is_a: UBERON:0000061 ! anatomical structure
relationship: part_of UBERON:0001003 ! epidermis

[Term]
id: UBERON:0002072
name: hypodermis
alt_id: UBERON:FMA_70544-MIAA_0000418-ZFA_0000117-ZFA_0001136
def: " lowermost layer of the integumentary system in vertebrates. Types of cells that are found in the hypodermis are fibroblasts, adipose cells, and macrophages. It is derived from the mesoderm, but unlike the dermis, it is not derived from the dermatome region of the mesoderm. In arthropods, the hypodermis is an epidermal layer of cells that secretes the chitinous cuticle. The term also refers to a layer of cells lying immediately below the epidermis of plants. This cell is also used to supervise the outer skin from burns and other such articulates. The hypodermis is used mainly for fat storage // A layer separating the inner face of the dermis from the subjacent muscle cells. It is covered on both sides by a basement membrane. It contains pigment cells. <a href='http://zfin.org/cgi-bin/ZFIN_jump?record=ZDB-PUB-040726-12'>Le Guellec et al, 2004.</a>" [Wikipedia:Hypodermis, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "hypoderm" EXACT []
synonym: "Hypodermis" EXACT []
synonym: "subcutaneous tissue" EXACT []
synonym: "subcutis" RELATED []
synonym: "superficial fascia" EXACT []
xref: BTO:0000313
xref: FMA:70544 ! Hypodermis
xref: TAO:0001136 ! hypodermis
xref: ZFA:0001136 ! hypodermis
is_a: UBERON:0000061 ! anatomical structure
relationship: part_of UBERON:0002199 ! integument
xref: ncithesaurus:Superficial_Fascia ! Superficial Fascia

[Term]
id: UBERON:0002073
name: hair follicle
alt_id: UBERON:FMA_70660-MA_0000154
def: "a tube-like opening in the epidermis where the hair shaft develops and into which the sebaceous glands open[GO]." [Wikipedia:Hair_follicle]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Hair follicle" EXACT []
xref: BTO:0000554
xref: FMA:70660 ! Hair follicle
xref: GAID:934 ! hair follicle
xref: HOG:0001268 ! hair follicle
xref: MA:0000154 ! hair follicle
xref: OpenCyc:Mx4rvVjOI5wpEbGdrcN5Y29ycA
is_a: UBERON:0000479 ! portion of tissue
relationship: part_of UBERON:0002097 ! skin
xref: ncithesaurus:Hair_Follicle ! Hair Follicle

[Term]
id: UBERON:0002074
name: hair shaft
alt_id: UBERON:FMA_70728-MA_0000159
comment: This class was created automatically from a combination of ontologies
synonym: "Hair shaft" EXACT []
xref: FMA:70728 ! Hair shaft
xref: MA:0000159 ! hair shaft
is_a: UBERON:0000021 ! cutaneous appendage
relationship: part_of UBERON:0001037 ! hair
relationship: part_of UBERON:0002073 ! hair follicle

[Term]
id: UBERON:0002075
name: viscus
alt_id: UBERON:FMA_7085-XAO_0003034
def: "General anatomical term that refers to any organ that is located within the body cavity (or in its extension, in the scrotum); it consists of organ parts that are embryologically derived from endoderm, splanchnic mesoderm or intermediate mesoderm; together with other organs, the viscus constitutes the respiratory, gastrointestinal, urinary, reproductive and immune systems, or is the central organ of the cardiovascular system. Examples: heart, lung, esophagus, kidney, ovary, spleen. // An internal organ of the body; especially: one (as the heart, liver, or intestine) located in the great cavity of the trunk proper." [BTO:0001491, Wikipedia:Viscus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "viscera" RELATED []
synonym: "Viscus" EXACT []
xref: FMA:7085 ! Viscus
xref: XAO:0003034 ! viscus
is_a: UBERON:0000062 ! organ
relationship: part_of UBERON:0002100 ! trunk
xref: BTO:0001491 ! viscus

[Term]
id: UBERON:0002076
name: cuticle of hair
alt_id: UBERON:FMA_70933-MA_0000157
comment: This class was created automatically from a combination of ontologies
synonym: "Cuticle of hair" EXACT []
synonym: "Hair cuticle" EXACT []
synonym: "hair cuticle" EXACT []
xref: FMA:70933 ! Cuticle of hair
xref: MA:0000157 ! hair cuticle
is_a: UBERON:0000061 ! anatomical structure
relationship: part_of UBERON:0001037 ! hair

[Term]
id: UBERON:0002077
name: cortex of hair
alt_id: UBERON:FMA_70934-MA_0000156
comment: This class was created automatically from a combination of ontologies
synonym: "Cortex of hair" EXACT []
synonym: "Hair cortex" EXACT []
synonym: "hair cortex" EXACT []
xref: FMA:70934 ! Cortex of hair
xref: MA:0000156 ! hair cortex
is_a: UBERON:0001851 ! cortex
intersection_of: UBERON:0001851 ! cortex
intersection_of: part_of UBERON:0001037 ! hair
relationship: part_of UBERON:0001037 ! hair

[Term]
id: UBERON:0002078
name: right atrium
alt_id: UBERON:FMA_7096-MA_0000075
def: "Right cardiac chamber which is continuous with the superior vena cava and inferior vena cava." [Wikipedia:Right_atrium]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "heart right atrium" EXACT []
synonym: "Right atrium" EXACT []
synonym: "Right atrium of heart" EXACT []
synonym: "right atrium of heart" EXACT []
xref: FMA:7096 ! Right atrium
xref: HOG:0000328 ! right atrium
xref: MA:0000075 ! heart right atrium
xref: OpenCyc:Mx4runNcs6fqEdudWQACs5b6Bw
is_a: UBERON:0002081 ! cardiac atrium
xref: ncithesaurus:Right_Atrium ! Right Atrium
xref: BTO:0001703 ! right atrium

[Term]
id: UBERON:0002079
name: left atrium
alt_id: UBERON:FMA_7097-MA_0000074
def: "Left cardiac chamber which is continuous with the pulmonary venous trunk." [Wikipedia:Left_atrium]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "heart left atrium" EXACT []
synonym: "Left atrium" EXACT []
synonym: "Left atrium of heart" EXACT []
synonym: "left atrium of heart" EXACT []
xref: FMA:7097 ! Left atrium
xref: galen:LeftAtrium
xref: HOG:0000369 ! left atrium
xref: MA:0000074 ! heart left atrium
xref: OpenCyc:Mx4rkJN1AagEEdudWQACs5b6Bw
is_a: UBERON:0002081 ! cardiac atrium
xref: ncithesaurus:Left_Atrium ! Left Atrium
xref: BTO:0001702 ! left atrium

[Term]
id: UBERON:0002080
name: right ventricle
alt_id: UBERON:FMA_7098-MA_0000093
def: "Right cardiac chamber which is continuous with the pulmonary arterial trunk." [Wikipedia:Right_ventricle]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "heart right ventricle" EXACT []
synonym: "Right ventricle" EXACT []
synonym: "Right ventricle of heart" EXACT []
synonym: "right ventricle of heart" EXACT []
xref: FMA:7098 ! Right ventricle
xref: HOG:0000717 ! heart right ventricle
xref: MA:0000093 ! heart right ventricle
xref: OpenCyc:Mx4rRMlc0KgNEdudWQACs5b6Bw
is_a: UBERON:0002082 ! cardiac ventricle
xref: ncithesaurus:Right_Ventricle ! Right Ventricle
xref: BTO:0001630 ! right ventricle

[Term]
id: UBERON:0002081
name: cardiac atrium
alt_id: UBERON:FMA_7099-MA_0000073
def: "Cardiac chamber which consists of a wall that surrounds the cavity of an atrium." [Wikipedia:Heart_atrium]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Atrium of heart" EXACT []
synonym: "atrium of heart" EXACT []
synonym: "Cardiac atrium" EXACT []
synonym: "heart atrium" EXACT []
xref: EFO:0000314 ! cardiac atrium
xref: FMA:7099 ! Cardiac atrium
xref: GAID:555 ! heart atrium
xref: HOG:0000175 ! heart atrium
xref: MA:0000073 ! heart atrium
xref: TAO:0000471 ! atrium
xref: ZFA:0000471 ! atrium
is_a: UBERON:0001050 ! atrium
intersection_of: UBERON:0001050 ! atrium
intersection_of: part_of UBERON:0000948 ! heart
relationship: part_of UBERON:0000948 ! heart
xref: ncithesaurus:Cardiac_Atrium ! Cardiac Atrium

[Term]
id: UBERON:0002082
name: cardiac ventricle
alt_id: UBERON:FMA_7100-MA_0000091-ZFA_0000009
def: "Cardiac chamber which consists of a wall that surrounds the cavity of a ventricle. // One of four heart chambers." [Wikipedia:Cardiac_ventricle, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Cardiac ventricle" EXACT []
synonym: "heart ventricle" EXACT []
synonym: "Lower chamber of heart" EXACT []
synonym: "lower chamber of heart" EXACT []
synonym: "ventricle" RELATED []
synonym: "Ventricle of heart" EXACT []
synonym: "ventricle of heart" EXACT []
xref: BTO:0000862
xref: FMA:7100 ! Cardiac ventricle
xref: GAID:568 ! heart ventricle
xref: HOG:0000435 ! heart ventricle
xref: MA:0000091 ! heart ventricle
xref: OpenCyc:Mx4rvVjj1pwpEbGdrcN5Y29ycA
xref: TAO:0000009 ! cardiac ventricle
xref: ZFA:0000009 ! cardiac ventricle
is_a: UBERON:0002300 ! ventricle
intersection_of: UBERON:0002300 ! ventricle
intersection_of: part_of UBERON:0000948 ! heart
relationship: part_of UBERON:0000948 ! heart
xref: ncithesaurus:Cardiac_Ventricle ! Cardiac Ventricle

[Term]
id: UBERON:0002083
name: ductus venosus
alt_id: UBERON:FMA_71007-MA_0002111
def: "." [Wikipedia:Ductus_venosus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Ductus venosus" EXACT []
xref: EHDAA:5402 ! ductus venosus
xref: FMA:71007 ! Ductus venosus
xref: HOG:0000924 ! ductus venosus
xref: MA:0002111 ! ductus venosus
is_a: UBERON:0002050 ! embryonic structure
relationship: part_of UBERON:0001009 ! circulatory system
xref: ncithesaurus:Ductus_Venosus ! Ductus Venosus

[Term]
id: UBERON:0002084
name: left ventricle
alt_id: UBERON:FMA_7101-MA_0000092
def: "Left cardiac chamber which is continuous with the aorta." [Wikipedia:Left_ventricle]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "heart left ventricle" EXACT []
synonym: "Left ventricle" EXACT []
synonym: "Left ventricle of heart" EXACT []
synonym: "left ventricle of heart" EXACT []
xref: FMA:7101 ! Left ventricle
xref: galen:LeftVentricle
xref: HOG:0000718 ! heart left ventricle
xref: MA:0000092 ! heart left ventricle
xref: OpenCyc:Mx4rtW8v46gEEdudWQACs5b6Bw
is_a: UBERON:0002082 ! cardiac ventricle
xref: ncithesaurus:Left_Ventricle ! Left Ventricle
xref: BTO:0001629 ! left ventricle

[Term]
id: UBERON:0002085
name: interatrial septum
alt_id: UBERON:FMA_7108-MA_0000084
def: "Cardiac septum which separates the right atrium from the left atrium." [Wikipedia:Interatrial_septum]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "atrial septum" EXACT []
synonym: "Interatrial septal wall" EXACT []
synonym: "interatrial septal wall" EXACT []
synonym: "Interatrial septum" EXACT []
xref: EHDAA:1896 ! interatrial septum
xref: FMA:7108 ! Interatrial septum
xref: galen:InteratrialSeptum
xref: HOG:0000385 ! interatrial septum
xref: MA:0000084 ! atrial septum
xref: OpenCyc:Mx4rpd49nLYEEduAAAACs2IKfQ
is_a: UBERON:0002099 ! cardiac septum
xref: ncithesaurus:Interatrial_Septum ! Interatrial Septum

[Term]
id: UBERON:0002086
name: sinoatrial valve
alt_id: UBERON:FMA_71120-ZFA_0000680
comment: This class was created automatically from a combination of ontologies
synonym: "Sinoatrial valve" EXACT []
xref: FMA:71120 ! Sinoatrial valve
xref: TAO:0000680 ! sinoatrial valve
xref: ZFA:0000680 ! sinoatrial valve
is_a: UBERON:0000946 ! cardial valve
is_a: UBERON:0002050 ! embryonic structure
relationship: develops_from UBERON:0002062 ! endocardial cushion
relationship: part_of UBERON:0002063 ! sinus venosus
relationship: part_of UBERON:0002081 ! cardiac atrium

[Term]
id: UBERON:0002087
name: atrioventricular canal
alt_id: UBERON:FMA_71121-ZFA_0001315
def: "." [Wikipedia:Atrioventricular_canal]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Atrioventricular canal" EXACT []
synonym: "AV canal" RELATED []
xref: FMA:71121 ! Atrioventricular canal
xref: HOG:0001473 ! atrioventricular canal
xref: TAO:0001315 ! atrioventricular canal
xref: ZFA:0001315 ! atrioventricular canal
is_a: UBERON:0002050 ! embryonic structure
relationship: part_of UBERON:0000948 ! heart

[Term]
id: UBERON:0002088
name: lateral thoracic vein
alt_id: UBERON:FMA_71210-MA_0002162
def: "." [Wikipedia:Lateral_thoracic_vein]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Lateral thoracic vein" EXACT []
xref: FMA:71210 ! Lateral thoracic vein
xref: MA:0002162 ! lateral thoracic vein
is_a: UBERON:0001638 ! vein

[Term]
id: UBERON:0002089
name: thoracodorsal vein
alt_id: UBERON:FMA_71213-MA_0002238
comment: This class was created automatically from a combination of ontologies
synonym: "Thoracodorsal vein" EXACT []
xref: FMA:71213 ! Thoracodorsal vein
xref: MA:0002238 ! thoracodorsal vein
is_a: UBERON:0001638 ! vein

[Term]
id: UBERON:0002090
name: axial skeleton
alt_id: UBERON:FMA_71221-MA_0000308-MIAA_0000148-XAO_0003073-ZFA_0000317
def: "*Subdivision of skeleton which consists of the bones of the vertebral column, the thoracic cage and the pelvis. // The post-cranial structural components forming the long axis of the vertebrate body; in Danio, consisting of the notochord, vertebrae, ribs, supraneurals, intermuscular bones, and unpaired median fins." [Wikipedia:Axial_skeleton, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Axial skeleton" EXACT []
synonym: "postcranial axia skelton" RELATED []
synonym: "postcranial axial skeleton" EXACT []
synonym: "vertebral column" RELATED []
xref: AAO:0000034 ! axial_skeleton
xref: EHDAA:5049 ! axial skeleton
xref: FMA:71221 ! Axial skeleton
xref: HOG:0000317 ! axial skeleton
xref: MA:0000308 ! axial skeleton
xref: MAT:0000148 ! axial skeleton
xref: MIAA:0000148 ! axial skeleton
xref: TAO:0000317 ! postcranial axial skeleton
xref: XAO:0003073 ! postcranial axial skeleton
xref: ZFA:0000317 ! postcranial axial skeleton
is_a: UBERON:0000075 ! subdivision of skeleton
relationship: develops_from UBERON:0003089 ! sclerotome
xref: ncithesaurus:Axial_Skeleton ! Axial Skeleton

[Term]
id: UBERON:0002091
name: appendicular skeleton
alt_id: UBERON:FMA_71222-MA_0000290-MIAA_0000278-ZFA_0000027
def: "*Subdivision of skeleton which consists of the bones of the upper and lower limbs." [Wikipedia:Appendicular_skeleton]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Appendicular skeleton" EXACT []
synonym: "paired fin skeleton" EXACT []
xref: AAO:0000747 ! appendicular_skeleton
xref: FMA:71222 ! Appendicular skeleton
xref: MA:0000290 ! appendicular skeleton
xref: MAT:0000278 ! paired fin skeleton
xref: MIAA:0000278 ! paired fin skeleton
xref: TAO:0000027 ! paired fin skeleton
xref: XAO:0003166 ! appendicular skeleton
xref: ZFA:0000027 ! paired fin skeleton
is_a: UBERON:0000075 ! subdivision of skeleton
intersection_of: UBERON:0000075 ! subdivision of skeleton
intersection_of: has_part UBERON:0002428 ! limb bone
xref: ncithesaurus:Appendicular_Skeleton ! Appendicular Skeleton

[Term]
id: UBERON:0002092
name: cranial dura mater
alt_id: UBERON:FMA_71236-MA_0000815
comment: This class was created automatically from a combination of ontologies
synonym: "brain dura mater" EXACT []
synonym: "Cranial dura mater" EXACT []
synonym: "Dura mater of brain" EXACT []
synonym: "dura mater of brain" EXACT []
xref: FMA:71236 ! Cranial dura mater
xref: HOG:0000270 ! brain dura mater
xref: MA:0000815 ! brain dura mater
is_a: UBERON:0002363 ! dura mater
intersection_of: UBERON:0002363 ! dura mater
intersection_of: part_of UBERON:0000955 ! brain
xref: ncithesaurus:Cerebral_Dura_Mater ! Brain Dura Mater

[Term]
id: UBERON:0002093
name: spinal dura mater
alt_id: UBERON:FMA_71237-MA_0001132
comment: This class was created automatically from a combination of ontologies
synonym: "Dura mater of spinal cord" EXACT []
synonym: "dura mater of spinal cord" EXACT []
synonym: "spinal cord dura mater" EXACT []
synonym: "Spinal dura mater" EXACT []
xref: FMA:71237 ! Spinal dura mater
xref: HOG:0000411 ! spinal cord dura mater
xref: MA:0001132 ! spinal cord dura mater
is_a: UBERON:0002363 ! dura mater
intersection_of: UBERON:0002363 ! dura mater
intersection_of: part_of UBERON:0002240 ! spinal cord
xref: ncithesaurus:Spinal_Cord_Dura_Mater ! Spinal Cord Dura Mater

[Term]
id: UBERON:0002094
name: interventricular septum
alt_id: UBERON:FMA_7133-MA_0000085
def: "Cardiac septum which separates the right ventricle from the left ventricle." [Wikipedia:Interventricular_septum]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Interventricular septum" EXACT []
synonym: "ventricular septum" EXACT []
xref: EHDAA:2603 ! interventricular septum
xref: FMA:7133 ! Interventricular septum
xref: galen:InterventricularSeptum
xref: HOG:0000386 ! interventricular septum
xref: MA:0000085 ! ventricular septum
is_a: UBERON:0002099 ! cardiac septum
xref: ncithesaurus:Interventricular_Septum ! Interventricular Septum
xref: BTO:0002483 ! interventricular septum

[Term]
id: UBERON:0002095
name: mesentery
alt_id: UBERON:FMA_7144-XAO_0000138-ZFA_0005129
def: "Anatomical organ component composed of a double layer of serous membrane that suspends a viscus from the body wall or connects adjacent viscera and in doing so conveys blood vessels, lymphatics and nerves to and from the viscera. Examples: greater omentum, broad ligament of uterus, sigmoid mesocolon. // A double layer composed of peritoneum that attaches the visceral organs to the body wall." [Wikipedia:Mesentery, ZFIN:curator]
comment: TODO - check. Consider FMA:259286 - Region of mesentery
subset: uberon_slim
synonym: "Mesentery" EXACT []
xref: BTO:0001380
xref: EHDAA:2943 ! mesentery
xref: EHDAA:2999 ! mesentery
xref: EHDAA:3017 ! mesentery
xref: EHDAA:3031 ! mesentery
xref: EHDAA:3838 ! mesentery
xref: EHDAA:3919 ! mesentery
xref: EHDAA:3932 ! mesentery
xref: EHDAA:3945 ! mesentery
xref: EHDAA:3955 ! mesentery
xref: EHDAA:3969 ! mesentery
xref: EHDAA:432 ! mesentery
xref: FMA:7144 ! Mesentery
xref: GAID:21 ! mesentery
xref: TAO:0005129 ! mesentery
xref: XAO:0000138 ! mesentery
xref: ZFA:0005129 ! mesentery
is_a: UBERON:0000042 ! serous membrane
relationship: part_of UBERON:0002358 ! peritoneum
xref: ncithesaurus:Mesentery ! Mesentery

[Term]
id: UBERON:0002096
name: lymphatic system
alt_id: UBERON:FMA_7162-ZFA_0000385
def: "." [Wikipedia:Lymphatic_system]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Lymphatic system" EXACT []
synonym: "Lymphatic tree system" EXACT []
synonym: "lymphatic tree system" EXACT []
xref: EFO:0000870 ! lymphatic system
xref: EHDAA:8677 ! lymphatic system
xref: FMA:7162 ! Lymphatic system
xref: GAID:931 ! lymphatic system
xref: HOG:0000842 ! lymphatic system
xref: MAT:0000197 ! lymphatic system
xref: MIAA:0000197 ! lymphatic system
xref: TAO:0000385 ! lymphatic system
xref: ZFA:0000385 ! lymphatic system
is_a: UBERON:0001009 ! circulatory system
xref: ncithesaurus:Lymphatic_System ! Lymphatic System

[Term]
id: UBERON:0002097
name: skin
alt_id: UBERON:FMA_7163-MA_0000151-MIAA_0000284-XAO_0000023
def: "Nonparenchymatous organ that consists of the dermis and epidermis. Subdivisions of the skin surround various body parts; as a whole, the skin constitutes the external layer of the body. Examples: There is only one skin. // Surface structure that consists of the external membranous integument of the animal." [OMD:skin, Wikipedia:Skin]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "integument" RELATED []
synonym: "Skin" EXACT []
xref: BTO:0001253
xref: EHDAA:6530 ! skin
xref: FMA:7163 ! Skin
xref: GAID:933 ! skin
xref: HOG:0000860 ! skin
xref: MA:0000151 ! skin
xref: MAT:0000284 ! skin
xref: MIAA:0000284 ! skin
xref: OpenCyc:Mx4rvVjX3ZwpEbGdrcN5Y29ycA
xref: XAO:0000023 ! skin
is_a: UBERON:0003102 ! surface structure
relationship: part_of UBERON:0002199 ! integument
xref: ncithesaurus:Skin ! Skin

[Term]
id: UBERON:0002098
name: apex of heart
alt_id: UBERON:FMA_7164-MA_0000488
def: "." [Wikipedia:Apex_of_heart]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Apex of heart" EXACT []
synonym: "Cardiac apex" EXACT []
synonym: "cardiac apex" EXACT []
synonym: "heart apex" EXACT []
xref: FMA:7164 ! Apex of heart
xref: MA:0000488 ! heart apex
is_a: UBERON:0000015 ! anatomical boundary
relationship: part_of UBERON:0000948 ! heart

[Term]
id: UBERON:0002099
name: cardiac septum
alt_id: UBERON:FMA_7180-MA_0000083
def: "Septum of organ which has as its parts the membranous and muscular parts that separates the right side of the heart from the left side of the heart." [Wikipedia:Heart_septum]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Cardiac septum" EXACT []
synonym: "heart septum" EXACT []
synonym: "Septum of heart" EXACT []
synonym: "septum of heart" EXACT []
xref: FMA:7180 ! Cardiac septum
xref: GAID:562 ! heart septum
xref: MA:0000083 ! heart septum
is_a: UBERON:0003037 ! septum
intersection_of: UBERON:0003037 ! septum
intersection_of: part_of UBERON:0000948 ! heart
relationship: part_of UBERON:0000948 ! heart
xref: ncithesaurus:Heart_Septum ! Heart Septum

[Term]
id: UBERON:0002100
name: trunk
alt_id: UBERON:FMA_7181-MIAA_0000296-XAO_0003025-ZFA_0001115
def: "Subdivision of body proper, which consists of a maximal set of diverse subclasses of organ and organ part spatially associated with the ribcage, thoracic and lumbar vertebral column, sacrum and coccyx, it is partially surrounded by skin of trunk. Examples: There is only one trunk. // Organism subdivision that is the part of the body posterior to the head and anterior to the tail. // Organism subdivision which is the part of the body posterior to the head and anterior to the tail." [Wikipedia:Torso, ZFA:0001115, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Torso" EXACT []
synonym: "torso" EXACT []
synonym: "Trunk" EXACT []
xref: BILA:0000116
xref: FMA:7181 ! Trunk
xref: MA:0000004 ! trunk
xref: MAT:0000296 ! trunk
xref: MIAA:0000296 ! trunk
xref: OpenCyc:Mx4rvVkJjpwpEbGdrcN5Y29ycA
xref: TAO:0001115 ! trunk
xref: XAO:0003025 ! trunk
xref: ZFA:0001115 ! trunk
is_a: UBERON:0000475 ! organism subdivision
relationship: has_part UBERON:0000915 ! thorax
relationship: has_part UBERON:0000916 ! abdomen
xref: ncithesaurus:Trunk ! Trunk
xref: BTO:0001493 ! trunk

[Term]
id: UBERON:0002101
name: limb
alt_id: UBERON:FMA_7182-MA_0000007-MIAA_0000090-XAO_0003027
def: "A jointed or prehensible appendage used for locomotion or manipulation. Examples: human arm, human leg, octopus tentacle, insect limb[Wikipedia]. A limb is an appendage of an animal used for locomotion or grasping. For example a leg, arm or some types of fin[GO]." [GO:0035108, Wikipedia:Limb_(anatomy)]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "extremity" RELATED []
synonym: "Limb" EXACT []
xref: EHDAA:1697 ! limb
xref: EHDAA:8273 ! limb
xref: FMA:7182 ! Limb
xref: GAID:36 ! extremity
xref: galen:Extremity
xref: HOG:0000336 ! limb
xref: MA:0000007 ! limb
xref: MAT:0000090 ! limb sensu vertebrata
xref: MIAA:0000090 ! limb sensu vertebrata
xref: XAO:0003027 ! limb
is_a: UBERON:0000026 ! appendage
xref: ncithesaurus:Limb ! Limb
xref: BTO:0001492 ! limb

[Term]
id: UBERON:0002102
name: forelimb
alt_id: UBERON:FMA_7183-MA_0000025-MIAA_0000394-XAO_0003030
def: "anterior-most limb on a body." [BTO:0001729, ISBN:0471209627, Wikipedia:Forelimb]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "anteriormost limb" EXACT []
synonym: "Fore limb" EXACT []
synonym: "fore limb" EXACT []
synonym: "foreleg" RELATED []
synonym: "Forelimb" EXACT []
synonym: "forelimb" EXACT []
synonym: "Superior member" EXACT []
synonym: "superior member" EXACT []
synonym: "Upper extremity" EXACT []
synonym: "upper extremity" EXACT []
synonym: "Upper limb" EXACT []
synonym: "upper limb" RELATED []
xref: AAO:0000205 ! forelimb
xref: EFO:0000882 ! forelimb
xref: EHDAA:6208 ! upper limb
xref: FMA:7183 ! Upper limb
xref: GAID:1215 ! forelimb
xref: GAID:51 ! upper extremity
xref: HOG:0000338 ! forelimb
xref: MA:0000025 ! forelimb
xref: MAT:0000394 ! forelimb
xref: MIAA:0000394 ! forelimb
xref: XAO:0003030 ! forelimb
is_a: UBERON:0002101 ! limb
relationship: anterior_to UBERON:0002103 ! hindlimb
xref: ncithesaurus:Upper_Extremity ! Upper Extremity
xref: BTO:0001729 ! forelimb

[Term]
id: UBERON:0002103 ! hindlimb
name: hindlimb
alt_id: UBERON:FMA_7184-MA_0000026-MIAA_0000395-XAO_0003031
def: "A posterior limb on an animal." [ISBN:0471209627, Wikipedia:Lower_limb]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Hind limb" EXACT []
synonym: "hind limb" EXACT []
synonym: "Hindlimb" EXACT []
synonym: "hindlimb" EXACT []
synonym: "Inferior member" EXACT []
synonym: "inferior member" EXACT []
synonym: "Lower extremity" EXACT []
synonym: "lower extremity" EXACT []
synonym: "Lower limb" EXACT []
synonym: "lower limb" RELATED []
xref: AAO:0000219 ! hind_limb
xref: EFO:0000883 ! hindlimb
xref: EHDAA:6094 ! lower limb
xref: FMA:7184 ! Lower limb
xref: GAID:1221 ! hindlimb
xref: GAID:38 ! lower extremity
xref: HOG:0000337 ! hindlimb
xref: MA:0000026 ! hindlimb
xref: MAT:0000395 ! hindlimb
xref: MIAA:0000395 ! hindlimb
xref: XAO:0003031 ! hind limb
is_a: UBERON:0002101 ! limb
xref: ncithesaurus:Lower_Extremity ! Lower Extremity
xref: BTO:0002345 ! hindlimb

[Term]
id: UBERON:0002104
name: visual system
alt_id: UBERON:FMA_7191-MA_0002444-ZFA_0001127
def: "." [Wikipedia:Visual_system]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Visual organ system" EXACT []
synonym: "visual organ system" EXACT []
synonym: "Visual system" EXACT []
xref: AAO:0000632 ! visual_system
xref: FMA:7191 ! Visual system
xref: MA:0002444 ! visual system
xref: OpenCyc:Mx4rvViCtpwpEbGdrcN5Y29ycA
xref: TAO:0001127 ! visual system
xref: ZFA:0001127 ! visual system
is_a: UBERON:0001032 ! sense organ system
relationship: disconnected_from UBERON:0002105 ! auditory system
xref: ncithesaurus:Visual_System ! Visual System

[Term]
id: UBERON:0002106
name: spleen
alt_id: UBERON:FMA_7196-MA_0000141-MIAA_0000085-XAO_0000328-ZFA_0000436
def: "." [Wikipedia:Spleen]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Spleen" EXACT []
xref: BTO:0001281
xref: EFO:0000869 ! spleen
xref: FMA:7196 ! Spleen
xref: GAID:1289 ! spleen
xref: HOG:0000120 ! spleen
xref: MA:0000141 ! spleen
xref: MAT:0000085 ! spleen
xref: MIAA:0000085 ! spleen
xref: OpenCyc:Mx4rvVjgw5wpEbGdrcN5Y29ycA
xref: TAO:0000436 ! spleen
xref: XAO:0000328 ! spleen
xref: ZFA:0000436 ! spleen
is_a: UBERON:0002075 ! viscus
relationship: develops_from UBERON:0001048 ! primordium
relationship: part_of UBERON:0000916 ! abdomen
relationship: part_of UBERON:0001007 ! digestive system
relationship: part_of UBERON:0002323 ! body cavity
relationship: part_of UBERON:0002390 ! hematopoietic system
relationship: part_of UBERON:0002405 ! immune system
xref: ncithesaurus:Spleen ! Spleen

[Term]
id: UBERON:0002107
name: liver
alt_id: UBERON:FMA_7197-MA_0000358-MIAA_0000097-XAO_0000133-ZFA_0000123
def: "Vascular, glandular internal organ that secretes bile and causes important changes in many of the substances contained in the blood. // Lobular organ the parenchyma of which consists of lobules which communicate with the biliary tree[FMA]" [BTO:0000759, Wikipedia:Liver]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Liver" EXACT []
xref: BTO:0000759
xref: EFO:0000887 ! liver
xref: EHDAA:2197 ! liver
xref: FMA:7197 ! Liver
xref: GAID:288 ! liver
xref: HOG:0000257 ! liver
xref: MA:0000358 ! liver
xref: MAT:0000097 ! liver
xref: MIAA:0000097 ! liver
xref: ncithesaurus:Liver
xref: OpenCyc:Mx4rvVimppwpEbGdrcN5Y29ycA
xref: TAO:0000123 ! liver
xref: XAO:0000133 ! liver
xref: ZFA:0000123 ! liver
is_a: UBERON:0002075 ! viscus
relationship: develops_from UBERON:0000925 ! endoderm
relationship: has_part CL:0000182 ! hepatocyte
relationship: part_of UBERON:0000916 ! abdomen
relationship: part_of UBERON:0002405 ! immune system
relationship: part_of UBERON:0002423 ! hepatobiliary system

[Term]
id: UBERON:0002108
name: small intestine
alt_id: UBERON:FMA_7200-MA_0000337-MIAA_0000047-XAO_0000130-ZFA_0001323
def: "Organ with organ cavity which is continuous proximally with the stomach and distally with the large intestine. Examples: There is only one small intestine. // The passage from the posterior intestine, from the rectal valve to the opening to the exterior. // The terminal region of the mid intestine is comprised of specialized enterocytes that appear to play a role in mucosal immunity. <a href='http://zfin.org/cgi-bin/ZFIN_jump?record=ZDB-PUB-050120-6'>Wallace et al, 2005.</a>" [WA:dh, Wikipedia:Small_intestine, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "anterior intestine" RELATED []
synonym: "mid intestine" RELATED []
synonym: "Small bowel" EXACT []
synonym: "small bowel" EXACT []
synonym: "Small intestine" EXACT []
synonym: "small intestine" EXACT []
xref: BTO:0000651
xref: EFO:0000841 ! small intestine
xref: FMA:7200 ! Small intestine
xref: GAID:313 ! small intestine
xref: HOG:0000055 ! small intestine
xref: MA:0000337 ! small intestine
xref: MAT:0000047 ! small intestine
xref: MIAA:0000047 ! small intestine
xref: ncithesaurus:Small_Intestine
xref: OpenCyc:Mx4rvVjlIJwpEbGdrcN5Y29ycA
xref: TAO:0001323 ! mid intestine
xref: XAO:0000130 ! small intestine
xref: ZFA:0001323 ! mid intestine
is_a: UBERON:0000062 ! organ
relationship: part_of UBERON:0001008 ! urinary system
relationship: part_of UBERON:0001555 ! gut

[Term]
id: UBERON:0002109
name: set of nares
alt_id: UBERON:FMA_72005-ZFA_0000550
def: "." [Wikipedia:Nares]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Nares" EXACT []
synonym: "nares" RELATED []
synonym: "Nares set" EXACT []
synonym: "nares set" EXACT []
synonym: "naris" EXACT []
synonym: "Nostrils" EXACT []
synonym: "nostrils" EXACT []
synonym: "Set of nares" EXACT []
xref: AAO:0000311 ! naris
xref: EHDAA:9083 ! naris
xref: FMA:72005 ! Set of nares
xref: HOG:0000663 ! naris
xref: OpenCyc:Mx4rvViCLpwpEbGdrcN5Y29ycA
xref: TAO:0000550 ! naris
xref: ZFA:0000550 ! naris
is_a: UBERON:0003102 ! surface structure
relationship: part_of UBERON:0000004 ! olfactory apparatus
xref: MA:0000282 ! naris
xref: ncithesaurus:Nostril ! Nostril

[Term]
id: UBERON:0002110
name: gallbladder
alt_id: UBERON:FMA_7202-MA_0000356-MIAA_0000072-XAO_0000135-ZFA_0000208
def: "Organ with organ cavity which is continuous proximally with the cystic duct and distally terminates in the fundus of the gallbladder. Examples: There is only one gallbladder." [Wikipedia:Gallbladder]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Gall bladder" EXACT []
synonym: "gall bladder" EXACT []
synonym: "Gallbladder" EXACT []
xref: BTO:0000493
xref: EFO:0000853 ! gall bladder
xref: EHDAA:8062 ! gall bladder
xref: FMA:7202 ! Gallbladder
xref: galen:Gallbladder
xref: HOG:0000221 ! gall bladder
xref: MA:0000356 ! gall bladder
xref: MAT:0000072 ! gall bladder
xref: MIAA:0000072 ! gall bladder
xref: ncithesaurus:Gallbladder
xref: OpenCyc:Mx4rvVkGr5wpEbGdrcN5Y29ycA
xref: TAO:0000208 ! gall bladder
xref: XAO:0000135 ! gall bladder
xref: ZFA:0000208 ! gall bladder
is_a: UBERON:0002075 ! viscus
relationship: part_of UBERON:0000916 ! abdomen
relationship: part_of UBERON:0002294 ! biliary system
relationship: part_of UBERON:0002323 ! body cavity

[Term]
id: UBERON:0002111
name: smooth muscle of artery
alt_id: UBERON:FMA_72024-MA_0000708
comment: This class was created automatically from a combination of ontologies
synonym: "artery smooth muscle" EXACT []
synonym: "Smooth muscle of artery" EXACT []
xref: BTO:0000087
xref: FMA:72024 ! Smooth muscle of artery
xref: MA:0000708 ! artery smooth muscle
is_a: UBERON:0001135 ! smooth muscle tissue
intersection_of: UBERON:0001135 ! smooth muscle tissue
intersection_of: part_of UBERON:0001637 ! artery
relationship: part_of UBERON:0001637 ! artery

[Term]
id: UBERON:0002112
name: smooth muscle of esophagus
alt_id: UBERON:FMA_72025-MA_0001573
comment: This class was created automatically from a combination of ontologies
synonym: "esophagus smooth muscle" EXACT []
synonym: "oesophagus smooth muscle" RELATED []
synonym: "Smooth muscle of esophagus" EXACT []
xref: FMA:72025 ! Smooth muscle of esophagus
xref: MA:0001573 ! esophagus smooth muscle
is_a: UBERON:0001135 ! smooth muscle tissue
intersection_of: UBERON:0001135 ! smooth muscle tissue
intersection_of: part_of UBERON:0001043 ! esophagus

[Term]
id: UBERON:0002113
name: kidney
alt_id: UBERON:FMA_7204-MA_0001683
alt_id: UBERON:FMA_7205-MA_0001655
def: "A paired organ which has the production of urine as its primary function." [Wikipedia:Kidney]
subset: uberon_slim
synonym: "Kidney" EXACT []
synonym: "kidney" EXACT []
synonym: "Left kidney" EXACT []
synonym: "left kidney" EXACT []
synonym: "Right kidney" EXACT []
synonym: "right kidney" EXACT []
xref: AAO:0000250 ! kidney
xref: BTO:0000671
xref: EFO:0000929 ! kidney
xref: FMA:7203 ! Kidney
xref: GAID:423 ! kidney
xref: galen:Kidney
xref: MA:0000368 ! kidney
xref: MAT:0000119 ! kidney
xref: MIAA:0000118 ! mesonephros - adult
xref: MIAA:0000119 ! kidney
xref: ncithesaurus:Kidney
xref: OpenCyc:Mx4rvVjlYpwpEbGdrcN5Y29ycA
xref: TAO:0000529 ! kidney
is_a: UBERON:0000489 ! cavitated compound organ
relationship: part_of UBERON:0000916 ! abdomen
relationship: part_of UBERON:0001008 ! urinary system

[Term]
id: UBERON:0002114
name: duodenum
alt_id: UBERON:FMA_7206-MA_0000338-MIAA_0000044-XAO_0000236
def: "The first part of the small intestine. At the junction of the stomach and the duodenum the alimentary canal is inflected. The duodenum first goes anteriorly for a short distance, turns dorsally, and eventually caudally, thus it is a U-shaped structure with two horizontal sections (a ventral and a dorsal one)." [ISBN:0815318960, Wikipedia:Duodenum]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Duodenum" EXACT []
xref: BTO:0000365
xref: EFO:0000851 ! duodenum
xref: EHDAA:3830 ! duodenum
xref: EHDAA:3937 ! duodenum
xref: FMA:7206 ! Duodenum
xref: GAID:284 ! duodenum
xref: galen:Duodenum
xref: HOG:0000052 ! duodenum
xref: MA:0000338 ! duodenum
xref: MAT:0000044 ! duodenum
xref: MIAA:0000044 ! duodenum
xref: ncithesaurus:Duodenum
xref: OpenCyc:Mx4rv4LJDpwpEbGdrcN5Y29ycA
xref: XAO:0000236 ! duodenum
is_a: UBERON:0002108 ! small intestine
relationship: part_of UBERON:0002108 ! small intestine

[Term]
id: UBERON:0002115
name: jejunum
alt_id: UBERON:FMA_7207-MA_0000340-MIAA_0000045
def: "." [Wikipedia:Jejunum]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Jejunum" EXACT []
xref: BTO:0000657
xref: FMA:7207 ! Jejunum
xref: GAID:318 ! jejunum
xref: galen:Jejunum
xref: HOG:0000053 ! jejunum
xref: MA:0000340 ! jejunum
xref: MAT:0000045 ! jejunum
xref: MIAA:0000045 ! jejunum
xref: ncithesaurus:Jejunum
is_a: UBERON:0002108 ! small intestine

[Term]
id: UBERON:0002116
name: ileum
alt_id: UBERON:FMA_7208-MA_0000339-MIAA_0000282-XAO_0000237
def: "." [Wikipedia:Ileum]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Ileum" EXACT []
xref: BTO:0000620
xref: FMA:7208 ! Ileum
xref: GAID:315 ! ileum
xref: galen:Ileum
xref: HOG:0000647 ! ileum
xref: MA:0000339 ! ileum
xref: MAT:0000282 ! ileum
xref: MIAA:0000282 ! ileum
xref: ncithesaurus:Ileum
xref: OpenCyc:Mx4rvdcLHZwpEbGdrcN5Y29ycA
xref: XAO:0000237 ! ileum
is_a: UBERON:0002108 ! small intestine
relationship: part_of UBERON:0002108 ! small intestine

[Term]
id: UBERON:0002117
name: testicle
alt_id: UBERON:FMA_7211-MA_0001747
alt_id: UBERON:FMA_7212-MA_0001746
def: "." [Wikipedia:Testicle]
comment: TODO: add subtypes, L/R
subset: uberon_slim
synonym: "Left testicle" EXACT []
synonym: "left testicle" EXACT []
synonym: "Left testis" EXACT []
synonym: "left testis" EXACT []
synonym: "Right testicle" EXACT []
synonym: "right testicle" EXACT []
synonym: "Right testis" EXACT []
synonym: "right testis" EXACT []
xref: FMA:7211 ! Right testis
xref: FMA:7212 ! Left testis
xref: MA:0001746 ! left testis
xref: MA:0001747 ! right testis
xref: OpenCyc:Mx4rvVjM25wpEbGdrcN5Y29ycA
is_a: UBERON:0000473 ! testis
relationship: part_of UBERON:0000473 ! testis
xref: ncithesaurus:Left_Testis ! Left Testis

[Term]
id: UBERON:0002118
name: right ovary
alt_id: UBERON:FMA_7213-MA_0001705
comment: This class was created automatically from a combination of ontologies
synonym: "Right ovary" EXACT []
xref: FMA:7213 ! Right ovary
xref: MA:0001705 ! right ovary
is_a: UBERON:0000992 ! ovary
xref: ncithesaurus:Right_Ovary ! Right Ovary

[Term]
id: UBERON:0002119
name: left ovary
alt_id: UBERON:FMA_7214-MA_0001704
comment: This class was created automatically from a combination of ontologies
synonym: "Left ovary" EXACT []
xref: FMA:7214 ! Left ovary
xref: MA:0001704 ! left ovary
is_a: UBERON:0000992 ! ovary
xref: ncithesaurus:Left_Ovary ! Left Ovary

[Term]
id: UBERON:0002120
name: pronephros
alt_id: UBERON:FMA_72170-MIAA_0000117-XAO_0002000-ZFA_0000151
def: "In mammals, the pronephros is the first of the three embryonic kidneys to be established and exists only transiently. In lower vertebrates such as fish and amphibia, the pronephros is the fully functional embryonic kidney and is indispensible for larval life[GO]. // The first kidney in all vertebrates - it is transitional and disappears soon after it has formed. // Organ that serves as a transient kidney, providing osmoregulation during early developmental stages and then degenerating during metamorphosis. // The embryonic kidney, present at the level of the third somite, is composed of two glomeruli fused at the midline, two pronephric tubules, and paired bilateral pronephric ducts that modify the composition of the blood filtrate before delivering it to the cloaca for excretion.<a href='http://zfin.org/cgi-bin/ZFIN_jump?record=ZDB-PUB-961014-576'>Kimmel et al, 1995.</a>" [GO:0048793, Wikipedia:Pronephros, XB:curator, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "embryonic kidney" RELATED []
synonym: "pronephric kidney" EXACT []
synonym: "Pronephros" EXACT []
xref: EFO:0000927 ! pronephros
xref: EHDAA:1017 ! pronephros
xref: FMA:72170 ! Pronephros
xref: HOG:0000037 ! pronephros
xref: MAT:0000117 ! pronephros
xref: MIAA:0000117 ! pronephros
xref: TAO:0000151 ! pronephros
xref: XAO:0002000 ! pronephric kidney
xref: ZFA:0000151 ! pronephros
is_a: UBERON:0002050 ! embryonic structure
is_a: UBERON:0002113 ! kidney
relationship: develops_from UBERON:0003104 ! mesenchyme
relationship: part_of UBERON:0002323 ! body cavity
xref: ncithesaurus:Pronephros ! Pronephros
xref: BTO:0001541 ! pronephros

[Term]
id: UBERON:0002122
name: capsule of thymus
alt_id: UBERON:FMA_72204-MA_0000766
comment: This class was created automatically from a combination of ontologies
synonym: "Capsule of thymus" EXACT []
synonym: "Thymus capsule" EXACT []
synonym: "thymus capsule" EXACT []
xref: FMA:72204 ! Capsule of thymus
xref: MA:0000766 ! thymus capsule
is_a: UBERON:0003893 ! capsule
is_a: UBERON:0002384 ! connective tissue
relationship: part_of UBERON:0002370 ! thymus

[Term]
id: UBERON:0002123
name: cortex of thymus
alt_id: UBERON:FMA_72205-MA_0000767
comment: This class was created automatically from a combination of ontologies
synonym: "Cortex of thymus" EXACT []
synonym: "Thymus cortex" EXACT []
synonym: "thymus cortex" EXACT []
xref: FMA:72205 ! Cortex of thymus
xref: MA:0000767 ! thymus cortex
is_a: UBERON:0001851 ! cortex
intersection_of: UBERON:0001851 ! cortex
intersection_of: part_of UBERON:0002370 ! thymus
relationship: part_of UBERON:0002370 ! thymus
xref: ncithesaurus:Thymus_Cortex ! Thymus Cortex

[Term]
id: UBERON:0002124
name: medulla of thymus
alt_id: UBERON:FMA_72206-MA_0000771
comment: This class was created automatically from a combination of ontologies
synonym: "Medulla of thymus" EXACT []
synonym: "Thymus medulla" EXACT []
synonym: "thymus medulla" EXACT []
xref: FMA:72206 ! Medulla of thymus
xref: MA:0000771 ! thymus medulla
is_a: UBERON:0000958 ! medulla
intersection_of: UBERON:0000958 ! medulla
intersection_of: part_of UBERON:0002370 ! thymus
relationship: part_of UBERON:0002370 ! thymus
xref: ncithesaurus:Thymus_Medulla ! Thymus Medulla

[Term]
id: UBERON:0002125
name: lobule of thymus
alt_id: UBERON:FMA_72215-MA_0000770
comment: This class was created automatically from a combination of ontologies
synonym: "Lobule of thymus" EXACT []
synonym: "Thymus lobule" EXACT []
synonym: "thymus lobule" EXACT []
xref: FMA:72215 ! Lobule of thymus
xref: MA:0000770 ! thymus lobule
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0002370 ! thymus

[Term]
id: UBERON:0002126
name: solitary tract nuclear complex
alt_id: UBERON:FMA_72242-MA_0001052
def: "." [Wikipedia:Nucleus_of_tractus_solitarius]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Nuclei of solitary tract" EXACT []
synonym: "nuclei of solitary tract" EXACT []
synonym: "Nucleus of tractus solitarius" EXACT []
synonym: "nucleus of tractus solitarius" EXACT []
synonym: "Solitary nuclei" EXACT []
synonym: "solitary nuclei" EXACT []
synonym: "solitary nucleus" EXACT []
synonym: "Solitary tract nuclear complex" EXACT []
synonym: "solitary tract nucleus" EXACT []
xref: FMA:72242 ! Solitary tract nuclear complex
xref: GAID:593 ! solitary nucleu
xref: MA:0001052 ! solitary tract nucleus
xref: NIF_GrossAnatomy:birnlex_1429 ! Solitary nucleus
is_a: UBERON:0002308 ! nucleus of brain
xref: ncithesaurus:Solitary_Nucleus ! Solitary Nucleus

[Term]
id: UBERON:0002127
name: inferior olivary complex
alt_id: UBERON:FMA_72243-MA_0001040-ZFA_0000215
def: "largest nucleus situated in the olivary body, part of the medulla oblongata. It is closely associated with the cerebellum, but its specific function is voluntary body movements." [Wikipedia:Inferior_olivary_nucleus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Inferior olivary complex" EXACT []
synonym: "inferior olivary nuclear complex" EXACT []
synonym: "Inferior olivary nucleus" EXACT []
synonym: "inferior olivary nucleus" EXACT []
synonym: "Inferior olive" EXACT []
synonym: "inferior olive" EXACT []
xref: FMA:72243 ! Inferior olivary complex
xref: MA:0001040 ! inferior olive
xref: NIF_GrossAnatomy:birnlex_1164 ! Inferior olivary complex
xref: TAO:0000215 ! inferior olive
xref: ZFA:0000215 ! inferior olive
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0000128 ! olivary body
xref: BTO:0002298 ! inferior olivary complex

[Term]
id: UBERON:0002128
name: superior olivary complex
alt_id: UBERON:FMA_72247-MA_0001026
def: "The superior olivary nucleus is a small cylindrical mass on the dorsal surface of the lateral part of the trapezoid body of the pons, and it is situated immediately above the inferior olivary nucleus. It receives projections from the cochlear nucleus and thus is involved in the perception of sound[GO]." [Wikipedia:Superior_olivary_complex]
comment: GO -- In mice, the superior olivary nucleus is a small cylindrical mass on the dorsal surface of the lateral part of the trapezoid body of the pons, and it is situated immediately above the inferior olivary nucleus. It receives projections from the cochlear nucleus and thus is involved in the perception of sound. -- TODO fix GO def to be the same throughout
subset: uberon_slim
synonym: "superior olivary nuclei" EXACT []
synonym: "superior olivary nucleus" EXACT []
synonym: "superior olive" RELATED []
xref: FMA:72247 ! Superior olivary complex
xref: MA:0001026 ! superior olivary nucleus
xref: NIF_GrossAnatomy:birnlex_1307 ! Superior olivary complex
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0000988 ! pons

[Term]
id: UBERON:0002129
name: cerebellar cortex
alt_id: UBERON:FMA_72248-MA_0000199
def: "The cerebellar cortex is a thin mantle of gray matter that covers the surface of each cerebral hemisphere. It has a characteristic morphology with convolutions (gyri) and crevices (sulci) that have specific functions. Six layers of nerve cells and the nerve pathways that connect them comprise the cerebellar cortex. Together, these regions are responsible for the processes of conscious thought, perception, emotion and memory as well as advanced motor function[GO]." [Wikipedia:Cerebellar_cortex]
comment: The circuits in the cerebellar cortex look similar across all classes of vertebrates, including fish, reptiles, birds, and mammals (e.g., Fig. 2). This has been taken as evidence that the cerebellum performs functions important to all vertebrate species. (Wikipedia)
subset: uberon_slim
synonym: "Cerebellar cortex" EXACT []
xref: BTO:0000043
xref: FMA:72248 ! Cerebellar cortex
xref: GAID:596 ! cerebellar cortex
xref: MA:0000199 ! cerebellar cortex
xref: NIF_GrossAnatomy:birnlex_1566 ! Cerebellar cortex
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0002037 ! cerebellum
xref: ncithesaurus:Cerebellar_Cortex ! Cerebellar Cortex

[Term]
id: UBERON:0002130
name: cerebellar nuclear complex
alt_id: UBERON:FMA_72249-MA_0000203
def: "." [Wikipedia:Cerebellar_nuclei]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Central nuclei" EXACT []
synonym: "central nuclei" EXACT []
synonym: "Cerebellar nuclear complex" EXACT []
synonym: "Cerebellar nuclei" EXACT []
synonym: "cerebellar nuclei" EXACT []
synonym: "Deep cerebellar nuclei" EXACT []
synonym: "deep cerebellar nuclei" EXACT []
synonym: "deep cerebellar nucleus" EXACT []
synonym: "Intracerebellar nuclei" EXACT []
synonym: "intracerebellar nuclei" EXACT []
synonym: "Intrinsic nuclei of cerebellum" EXACT []
synonym: "intrinsic nuclei of cerebellum" EXACT []
synonym: "Roof nuclei-2" EXACT []
synonym: "roof nuclei-2" EXACT []
xref: FMA:72249 ! Cerebellar nuclear complex
xref: GAID:599 ! cerebellar nuclei
xref: MA:0000203 ! deep cerebellar nucleus
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0002037 ! cerebellum

[Term]
id: UBERON:0002131
name: anterior lobe of cerebellum
alt_id: UBERON:FMA_72251-MA_0000991
def: "." [Wikipedia:Anterior_lobe_of_cerebellum]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Anterior cerebellar lobe" EXACT []
synonym: "anterior cerebellar lobe" EXACT []
synonym: "Anterior lobe of cerebellum" EXACT []
synonym: "cerebellum anterior lobe" EXACT []
xref: FMA:72251 ! Anterior lobe of cerebellum
xref: MA:0000991 ! cerebellum anterior lobe
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0002245 ! hemisphere of cerebellum

[Term]
id: UBERON:0002132
name: dentate nucleus
alt_id: UBERON:FMA_72260-MA_0001008
def: "." [Wikipedia:Dentate_nucleus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Dentate nucleus" EXACT []
synonym: "lateral cerebellar nucleus" EXACT []
synonym: "Lateral nucleus of cerebellum" EXACT []
synonym: "lateral nucleus of cerebellum" EXACT []
xref: FMA:72260 ! Dentate nucleus
xref: MA:0001008 ! lateral cerebellar nucleus
xref: NIF_GrossAnatomy:birnlex_1171 ! Dentate nucleus
is_a: UBERON:0002130 ! cerebellar nuclear complex
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0002130 ! cerebellar nuclear complex

[Term]
id: UBERON:0002133
name: atrioventricular valve
alt_id: UBERON:FMA_7233-ZFA_0005064
def: "Cardiac valve which has as its parts the leaf of cardiac valve that separates the atrium from the ventricle. // The atrioventricular valve has four distinct leaflets oriented anterior, posterior, left, and right of the atrioventricular orifice. <a href='ZFIN_jump?record=ZDB-PUB-010912-30'>Hu et al. 2001.</a>" [ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
synonym: "Atrioventricular valve" EXACT []
xref: EHDAA:7421 ! atrioventricular valves
xref: FMA:7233 ! Atrioventricular valve
xref: galen:AtrioventricularValve
xref: HOG:0001472 ! atrioventricular valve
xref: MA:0002789 ! atrioventricular valve
xref: OpenCyc:Mx4rfCfdorrpEduAAAACs6hRXg
xref: TAO:0005064 ! atrioventricular valve
xref: ZFA:0005064 ! atrioventricular valve
is_a: UBERON:0000946 ! cardial valve
relationship: develops_from UBERON:0002062 ! endocardial cushion
relationship: part_of UBERON:0002081 ! cardiac atrium
relationship: part_of UBERON:0002082 ! cardiac ventricle

[Term]
id: UBERON:0002134
name: tricuspid valve
alt_id: UBERON:FMA_7234-MA_0000090
def: "Atrioventricular valve which has as its parts the anterior, posterior and septal leaflets, attached to the fibrous ring of tricuspid valve." [Wikipedia:Tricuspid_valve]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Right atrioventricular valve" EXACT []
synonym: "right atrioventricular valve" EXACT []
synonym: "Tricuspid valve" EXACT []
xref: EHDAA:7427 ! tricuspid valve
xref: FMA:7234 ! Tricuspid valve
xref: GAID:567 ! tricuspid valve
xref: HOG:0000816 ! tricuspid valve
xref: MA:0000090 ! tricuspid valve
is_a: UBERON:0002133 ! atrioventricular valve
xref: ncithesaurus:Tricuspid_Valve ! Tricuspid Valve

[Term]
id: UBERON:0002135
name: mitral valve
alt_id: UBERON:FMA_7235-MA_0000088
def: "Atrioventricular valve which has as its parts the anterior and posterior leaflets, attached to the fibrous ring of mitral valve." [Wikipedia:Mitral_valve]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Bicuspid valve" EXACT []
synonym: "bicuspid valve" RELATED []
synonym: "Left atrioventricular valve" EXACT []
synonym: "left atrioventricular valve" EXACT []
synonym: "Mitral valve" EXACT []
xref: FMA:7235 ! Mitral valve
xref: GAID:565 ! mitral valve
xref: HOG:0000817 ! mitral valve
xref: MA:0000088 ! mitral valve
xref: OpenCyc:Mx4rv4l2nJwpEbGdrcN5Y29ycA
is_a: UBERON:0002133 ! atrioventricular valve
xref: ncithesaurus:Mitral_Valve ! Mitral Valve

[Term]
id: UBERON:0002136
name: hilus of dentate gyrus
alt_id: UBERON:FMA_72358-MA_0000947
comment: This class was created automatically from a combination of ontologies
synonym: "Dentate gyrus hilus" EXACT []
synonym: "dentate gyrus hilus" EXACT []
synonym: "Field CA4 of hippocampal formation" EXACT []
synonym: "field ca4 of hippocampal formation" EXACT []
synonym: "Hilus of dentate gyrus" EXACT []
xref: FMA:72358 ! Hilus of dentate gyrus
xref: MA:0000947 ! dentate gyrus hilus
xref: NIF_GrossAnatomy:birnlex_1482 ! Hilus of dentate gyrus
is_a: UBERON:0002744 ! hilum of dentate nucleus
relationship: part_of UBERON:0001885 ! dentate gyrus of hippocampal formation

[Term]
id: UBERON:0002137
name: aortic valve
alt_id: UBERON:FMA_7236-MA_0000087
def: "Cardiac valve which has as its parts the anterior, right posterior and left posterior cusps, attached to the fibrous ring of aortic valve." [Wikipedia:Aortic_valve]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Aortic valve" EXACT []
xref: EHDAA:4410 ! aortic valve
xref: FMA:7236 ! Aortic valve
xref: GAID:563 ! aortic valve
xref: galen:AorticValve
xref: HOG:0000815 ! aortic valve
xref: MA:0000087 ! aortic valve
xref: OpenCyc:Mx4rv5914JwpEbGdrcN5Y29ycA
is_a: UBERON:0000946 ! cardial valve
xref: ncithesaurus:Aortic_Valve ! Aortic Valve

[Term]
id: UBERON:0002138
name: habenulo-interpeduncular tract
alt_id: UBERON:FMA_72400-ZFA_0000353
comment: This class was created automatically from a combination of ontologies
synonym: "fasciculus retroflexus" EXACT []
synonym: "Habenulo-interpeduncular tract" EXACT []
synonym: "Habenulointerpeduncular fasciculus" EXACT []
synonym: "habenulointerpeduncular fasciculus" EXACT []
synonym: "Habenulointerpeduncular tract" EXACT []
synonym: "habenulointerpeduncular tract" RELATED []
synonym: "Habenulopeduncular tract" EXACT []
synonym: "habenulopeduncular tract" EXACT []
synonym: "Meynert's retroflex bundle" EXACT []
synonym: "meynert's retroflex bundle" EXACT []
xref: FMA:72400 ! Habenulo-interpeduncular tract
xref: NIF_GrossAnatomy:birnlex_1504 ! Fasciculus retroflexus
xref: TAO:0000353 ! fasciculus retroflexus
xref: ZFA:0000353 ! fasciculus retroflexus
is_a: UBERON:0000481 ! multi-tissue structure
relationship: part_of UBERON:0001894 ! diencephalon

[Term]
id: UBERON:0002139
name: subcommissural organ
alt_id: UBERON:FMA_72414-ZFA_0000683
def: "." [Wikipedia:Subcommissural_organ]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "SCO" RELATED []
synonym: "Subcommissural organ" EXACT []
xref: FMA:72414 ! Subcommissural organ
xref: GAID:794 ! subcommissural organ
xref: NIF_GrossAnatomy:birnlex_1028 ! Subcommissural organ
xref: TAO:0000683 ! subcommissural organ
xref: ZFA:0000683 ! subcommissural organ
is_a: UBERON:0000481 ! multi-tissue structure
relationship: part_of UBERON:0001016 ! nervous system
xref: BTO:0001820 ! subcommissural organ

[Term]
id: UBERON:0002140
name: parabigeminal nucleus
alt_id: UBERON:FMA_72415-MA_0001074
comment: This class was created automatically from a combination of ontologies
synonym: "Parabigeminal nucleus" EXACT []
xref: FMA:72415 ! Parabigeminal nucleus
xref: MA:0001074 ! parabigeminal nucleus
xref: NIF_GrossAnatomy:birnlex_1007 ! Parabigeminal nucleus
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0001943 ! midbrain tegmentum

[Term]
id: UBERON:0002141
name: parvocellular oculomotor nucleus
alt_id: UBERON:FMA_72424-MA_0001071
def: "." [Wikipedia:Edinger-westphal_nucleus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Accessory oculomotor nucleus" EXACT []
synonym: "accessory oculomotor nucleus" EXACT []
synonym: "edinger-westphal nucleus" EXACT []
synonym: "Oculomotor nucleus, parvocellular part" EXACT []
synonym: "oculomotor nucleus, parvocellular part" EXACT []
synonym: "Parvocellular oculomotor nucleus" EXACT []
xref: FMA:72424 ! Parvocellular oculomotor nucleus
xref: MA:0001071 ! edinger-westphal nucleus
xref: NIF_GrossAnatomy:birnlex_822 ! Parvocellular oculomotor nucleus
xref: ZFA:0000244 ! nucleus Edinger-Westphal
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0001943 ! midbrain tegmentum

[Term]
id: UBERON:0002142
name: pedunculopontine tegmental nucleus
alt_id: UBERON:FMA_72429-MA_0001020
def: "." [Wikipedia:Pedunculopontine_tegmental_nucleus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Peduncular pontine nucleus" EXACT []
synonym: "peduncular pontine nucleus" EXACT []
synonym: "Pedunculopontine nucleus" EXACT []
synonym: "pedunculopontine nucleus" EXACT []
synonym: "Pedunculopontine tegmental nucleus" EXACT []
xref: FMA:72429 ! Pedunculopontine tegmental nucleus
xref: MA:0001020 ! peduncular pontine nucleus
xref: NIF_GrossAnatomy:birnlex_1437 ! Pedunculopontine tegmental nucleus
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0000988 ! pons
relationship: part_of UBERON:0002275 ! reticular formation

[Term]
id: UBERON:0002143
name: dorsal tegmental nucleus
alt_id: UBERON:FMA_72434-ZFA_0000346
comment: This class was created automatically from a combination of ontologies
synonym: "Dorsal tegmental nucleus" EXACT []
synonym: "Dorsal tegmental nucleus (Gudden)" EXACT []
synonym: "dorsal tegmental nucleus (gudden)" EXACT []
synonym: "Gudden nucleus" EXACT []
synonym: "gudden nucleus" EXACT []
synonym: "Posterior tegmental nucleus" EXACT []
synonym: "posterior tegmental nucleus" EXACT []
synonym: "von Gudden's nucleus" EXACT []
synonym: "von gudden's nucleus" EXACT []
xref: FMA:72434 ! Dorsal tegmental nucleus
xref: MA:0001013 ! dorsal tegmental nucleus
xref: NIF_GrossAnatomy:birnlex_992 ! Dorsal tegmental nucleus
xref: TAO:0000346 ! dorsal tegmental nucleus
xref: ZFA:0000346 ! dorsal tegmental nucleus
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0001943 ! midbrain tegmentum

[Term]
id: UBERON:0002144
name: peripeduncular nucleus
alt_id: UBERON:FMA_72437-MA_0000875
comment: This class was created automatically from a combination of ontologies
synonym: "Peripeduncular nucleus" EXACT []
synonym: "Peripeduncular nucleus of pons" EXACT []
synonym: "peripeduncular nucleus of pons" EXACT []
xref: FMA:72437 ! Peripeduncular nucleus
xref: MA:0000875 ! peripeduncular nucleus
xref: NIF_GrossAnatomy:birnlex_1474 ! Peripeduncular nucleus
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0001900 ! subthalamus
relationship: part_of UBERON:0001943 ! midbrain tegmentum

[Term]
id: UBERON:0002145
name: interpeduncular nucleus
alt_id: UBERON:FMA_72439-MA_0001069
comment: This class was created automatically from a combination of ontologies
synonym: "Interpeduncular ganglion" EXACT []
synonym: "interpeduncular ganglion" EXACT []
synonym: "Interpeduncular nucleus" EXACT []
xref: FMA:72439 ! Interpeduncular nucleus
xref: MA:0001069 ! interpeduncular nucleus
xref: NIF_GrossAnatomy:birnlex_1000 ! Interpeduncular nucleus
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0001943 ! midbrain tegmentum

[Term]
id: UBERON:0002146
name: pulmonary valve
alt_id: UBERON:FMA_7246-MA_0000089
def: "Cardiac valve which has as its parts the right anterior, left anterior and posterior cusps, attached to the fibrous ring of pulmonary valve." [Wikipedia:Pulmonary_valve]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Pulmonary valve" EXACT []
synonym: "Pulmonic valve" EXACT []
synonym: "pulmonic valve" EXACT []
xref: EHDAA:4412 ! pulmonary valve
xref: FMA:7246 ! Pulmonary valve
xref: GAID:566 ! pulmonary valve
xref: HOG:0000814 ! pulmonary valve
xref: MA:0000089 ! pulmonary valve
is_a: UBERON:0000946 ! cardial valve
xref: ncithesaurus:Pulmonary_Valve ! Pulmonary Valve

[Term]
id: UBERON:0002147
name: reticulotegmental nucleus
alt_id: UBERON:FMA_72471-MA_0001025
comment: This class was created automatically from a combination of ontologies
synonym: "reticular tegmental nucleus" EXACT []
synonym: "Reticulotegmental nucleus" EXACT []
synonym: "Reticulotegmental nucleus of pons" EXACT []
synonym: "reticulotegmental nucleus of pons" EXACT []
synonym: "Tegmental reticular nucleus, pontine gray" EXACT []
synonym: "tegmental reticular nucleus, pontine gray" EXACT []
xref: FMA:72471 ! Reticulotegmental nucleus
xref: MA:0001025 ! reticular tegmental nucleus
xref: NIF_GrossAnatomy:birnlex_882 ! Reticulotegmental nucleus
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0000988 ! pons
relationship: part_of UBERON:0002275 ! reticular formation

[Term]
id: UBERON:0002148
name: locus ceruleus
alt_id: UBERON:FMA_72478-MA_0001017-ZFA_0000539
def: "The locus ceruleus is a dense cluster of neurons within the dorsorostral pons. This nucleus is the major location of neurons that release norepinephrine throughout the brain, and is responsible for physiological responses to stress and panic[GO]." [Wikipedia:Locus_ceruleus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "caerulean nucleus" EXACT []
synonym: "locus coeruleus" EXACT []
synonym: "nucleus of locus caeruleus" EXACT []
xref: BTO:0001408
xref: FMA:72478 ! Locus ceruleus
xref: GAID:577 ! locus coeruleu
xref: MA:0001017 ! locus coeruleus
xref: NIF_GrossAnatomy:birnlex_905 ! Locus ceruleus
xref: TAO:0000539 ! locus coeruleus
xref: ZFA:0000539 ! locus coeruleus
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0000988 ! pons

[Term]
id: UBERON:0002149
name: superior salivatory nucleus
alt_id: UBERON:FMA_72482-MA_0001027
def: "visceromotor cranial nerve nucleus located in the pontine tegmentum." [Wikipedia:Superior_salivatory_nucleus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "superior salivary nucleus" EXACT []
synonym: "Superior salivatory nucleus" EXACT []
xref: FMA:72482 ! Superior salivatory nucleus
xref: MA:0001027 ! superior salivatory nucleus
xref: NIF_GrossAnatomy:birnlex_1131 ! Superior salivatory nucleus
is_a: UBERON:0000126 ! cranial nerve nucleus
relationship: part_of UBERON:0000988 ! pons

[Term]
id: UBERON:0002150
name: superior cerebellar peduncle
alt_id: UBERON:FMA_72495-MA_0002746
def: "." [Wikipedia:Superior_cerebellar_peduncle]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Superior cerebellar peduncle" EXACT []
xref: FMA:72495 ! Superior cerebellar peduncle
xref: MA:0002746 ! superior cerebellar peduncle
xref: NIF_GrossAnatomy:birnlex_1711 ! Superior cerebellar peduncle
is_a: UBERON:0002474 ! cerebellar peduncle
relationship: part_of UBERON:0002298 ! brainstem

[Term]
id: UBERON:0002151
name: pontine nuclear group
alt_id: UBERON:FMA_72512-MA_0001021
def: "." [Wikipedia:Pontine_nuclei]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Pontine nuclear group" EXACT []
synonym: "Pontine nuclei" EXACT []
synonym: "pontine nuclei" EXACT []
synonym: "pontine nucleus" EXACT []
xref: FMA:72512 ! Pontine nuclear group
xref: MA:0001021 ! pontine nucleus
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0000988 ! pons
xref: BTO:0003396 ! pontine nucleus

[Term]
id: UBERON:0002152
name: middle cerebellar peduncle
alt_id: UBERON:FMA_72515-MA_0002745
def: "." [Wikipedia:Middle_cerebellar_peduncle]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Middle cerebellar peduncle" EXACT []
xref: FMA:72515 ! Middle cerebellar peduncle
xref: MA:0002745 ! middle cerebellar peduncle
xref: NIF_GrossAnatomy:birnlex_1529 ! Middle cerebellar peduncle
xref: NIF_GrossAnatomy:birnlex_1699
is_a: UBERON:0002474 ! cerebellar peduncle
relationship: part_of UBERON:0002298 ! brainstem

[Term]
id: UBERON:0002153
name: fastigial nucleus
alt_id: UBERON:FMA_72537-MA_0001009
def: "." [Wikipedia:Fastigial_nucleus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Fastigial nucleus" EXACT []
synonym: "Medial (fastigial) nucleus" EXACT []
synonym: "medial (fastigial) nucleus" EXACT []
synonym: "medial cerebellar nucleus" EXACT []
synonym: "Roof nucleus-1" EXACT []
synonym: "roof nucleus-1" EXACT []
xref: FMA:72537 ! Fastigial nucleus
xref: MA:0001009 ! medial cerebellar nucleus
xref: NIF_GrossAnatomy:birnlex_1146 ! Fastigial nucleus
is_a: UBERON:0002130 ! cerebellar nuclear complex
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0002130 ! cerebellar nuclear complex

[Term]
id: UBERON:0002154
name: lateral reticular nucleus
alt_id: UBERON:FMA_72574-MA_0001047-ZFA_0000535
def: "." [Wikipedia:Lateral_reticular_nucleus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Lateral reticular nucleus" EXACT []
synonym: "Lateral reticular nucleus (medulla)" EXACT []
synonym: "lateral reticular nucleus (medulla)" EXACT []
xref: FMA:72574 ! Lateral reticular nucleus
xref: MA:0001047 ! lateral reticular nucleus
xref: TAO:0000535 ! lateral reticular nucleus
xref: ZFA:0000535 ! lateral reticular nucleus
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0002155
name: gigantocellular nucleus
alt_id: UBERON:FMA_72576-MA_0001037
def: "." [Wikipedia:Gigantocellular_nucleus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Gigantocellular nucleus" EXACT []
synonym: "Gigantocellular reticular nucleus" EXACT []
synonym: "gigantocellular reticular nucleus" EXACT []
xref: FMA:72576 ! Gigantocellular nucleus
xref: MA:0001037 ! gigantocellular reticular nucleus
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0002156
name: nucleus raphe magnus
alt_id: UBERON:FMA_72584-MA_0001024
def: "." [Wikipedia:Nucleus_raphe_magnus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Magnus raphe nucleus" EXACT []
synonym: "magnus raphe nucleus" EXACT []
synonym: "Nucleus raphe magnus" EXACT []
synonym: "Raphe magnus nucleus" EXACT []
synonym: "raphe magnus nucleus" EXACT []
xref: FMA:72584 ! Nucleus raphe magnus
xref: MA:0001024 ! raphe magnus nucleus
xref: NIF_GrossAnatomy:birnlex_1363 ! Nucleus raphe magnus
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0000988 ! pons

[Term]
id: UBERON:0002157
name: nucleus raphe pallidus
alt_id: UBERON:FMA_72586-MA_0001051
def: "." [Wikipedia:Nucleus_raphe_pallidus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Nucleus raphe pallidus" EXACT []
synonym: "Pallidal raphe nucleus" EXACT []
synonym: "pallidal raphe nucleus" EXACT []
synonym: "Raphe pallidus nucleus" EXACT []
synonym: "raphe pallidus nucleus" EXACT []
xref: FMA:72586 ! Nucleus raphe pallidus
xref: MA:0001051 ! raphe pallidus nucleus
xref: NIF_GrossAnatomy:birnlex_1375 ! Nucleus raphe pallidus
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0002158
name: principal inferior olivary nucleus
alt_id: UBERON:FMA_72592-MA_0001046
comment: This class was created automatically from a combination of ontologies
synonym: "Chief inferior olivary nucleus" EXACT []
synonym: "chief inferior olivary nucleus" EXACT []
synonym: "Inferior olivary complex, principal olive" EXACT []
synonym: "inferior olivary complex, principal olive" EXACT []
synonym: "inferior olive principal nucleus" EXACT []
synonym: "Inferior olive, principal nucleus" EXACT []
synonym: "inferior olive, principal nucleus" EXACT []
synonym: "Main olivary nucleus" EXACT []
synonym: "main olivary nucleus" EXACT []
synonym: "Principal inferior olivary nucleus" EXACT []
synonym: "Principal nucleus of inferior olive" EXACT []
synonym: "principal nucleus of inferior olive" EXACT []
synonym: "Principal olivary nucleus" EXACT []
synonym: "principal olivary nucleus" EXACT []
xref: FMA:72592 ! Principal inferior olivary nucleus
xref: MA:0001046 ! inferior olive principal nucleus
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0002127 ! inferior olivary complex

[Term]
id: UBERON:0002159
name: medial accessory inferior olivary nucleus
alt_id: UBERON:FMA_72594-MA_0001045
comment: This class was created automatically from a combination of ontologies
synonym: "Inferior olivary complex, medial accessory olive" EXACT []
synonym: "inferior olivary complex, medial accessory olive" EXACT []
synonym: "inferior olive medial nucleus" EXACT []
synonym: "Inferior olive, medial nucleus" EXACT []
synonym: "inferior olive, medial nucleus" EXACT []
synonym: "Medial accessory inferior olivary nucleus" EXACT []
synonym: "Medial accessory olivary nucleus" EXACT []
synonym: "medial accessory olivary nucleus" EXACT []
xref: FMA:72594 ! Medial accessory inferior olivary nucleus
xref: MA:0001045 ! inferior olive medial nucleus
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0002127 ! inferior olivary complex

[Term]
id: UBERON:0002160
name: nucleus prepositus
alt_id: UBERON:FMA_72596-MA_0001023
comment: This class was created automatically from a combination of ontologies
synonym: "Nucleus prepositus" EXACT []
synonym: "nucleus prepositus hypoglossus" RELATED []
synonym: "Prepositus hypoglossal nucleus" EXACT []
synonym: "prepositus hypoglossal nucleus" EXACT []
synonym: "Prepositus nucleus" EXACT []
synonym: "prepositus nucleus" EXACT []
xref: FMA:72596 ! Nucleus prepositus
xref: MA:0001023 ! prepositus hypoglossal nucleus
xref: NIF_GrossAnatomy:birnlex_2652 ! Nucleus prepositus
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0000988 ! pons

[Term]
id: UBERON:0002161
name: gracile nucleus
alt_id: UBERON:FMA_72602-MA_0001038
def: "." [Wikipedia:Gracile_nucleus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Goll's nucleus" EXACT []
synonym: "goll's nucleus" EXACT []
synonym: "Gracile nucleus" EXACT []
xref: FMA:72602 ! Gracile nucleus
xref: MA:0001038 ! gracile nucleus
xref: NIF_GrossAnatomy:birnlex_2643 ! Gracile nucleus
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0002162
name: area postrema
alt_id: UBERON:FMA_72607-MA_0001034-ZFA_0005146
def: "An area of medulla oblongata, outside the blood-brain barrier. The apical terminals of the neurons are, in a strategic location either to monitor the chemical constitution of the plasma or to release neurogenic substances into the general circulation. <a href='ZFIN_jump?record=ZDB-PUB-970602-2'>Ma 1997.</a>" [Wikipedia:Area_postrema, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Area postrema" EXACT []
xref: FMA:72607 ! Area postrema
xref: GAID:591 ! area postrema
xref: MA:0001034 ! area postrema
xref: NIF_GrossAnatomy:birnlex_2636 ! Area postrema
xref: TAO:0005146 ! area postrema
xref: ZFA:0005146 ! area postrema
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001896 ! medulla oblongata
xref: BTO:0003425 ! area postrema

[Term]
id: UBERON:0002163
name: inferior cerebellar peduncle
alt_id: UBERON:FMA_72615-MA_0002744
def: "." [Wikipedia:Inferior_cerebellar_peduncle]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Inferior cerebellar peduncle" EXACT []
synonym: "Restiform body" EXACT []
synonym: "restiform body" EXACT []
xref: FMA:72615 ! Inferior cerebellar peduncle
xref: MA:0002744 ! inferior cerebellar peduncle
xref: NIF_GrossAnatomy:birnlex_1645
xref: NIF_GrossAnatomy:birnlex_1691 ! Inferior cerebellar peduncle
is_a: UBERON:0002474 ! cerebellar peduncle
relationship: part_of UBERON:0001896 ! medulla oblongata

[Term]
id: UBERON:0002164
name: tectobulbar tract
alt_id: UBERON:FMA_72645-ZFA_0000446
def: "a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body in the optic tectum towards target cells in the premotor reticulospinal system in the hindbrain." [GO:0034429]
comment: This class was created automatically from a combination of ontologies
synonym: "tecto-bulbar tract" EXACT []
synonym: "Tectobulbar tract" EXACT []
xref: FMA:72645 ! Tectobulbar tract
xref: NIF_GrossAnatomy:birnlex_750 ! Tectobulbar tract
xref: TAO:0000446 ! tecto-bulbar tract
xref: ZFA:0000446 ! tecto-bulbar tract
is_a: UBERON:0000481 ! multi-tissue structure
relationship: part_of UBERON:0000481 ! multi-tissue structure
relationship: part_of UBERON:0001896 ! medulla oblongata

[Term]
id: UBERON:0002165
name: endocardium
alt_id: UBERON:FMA_7280-XAO_0000066-ZFA_0001320
def: "Tunica intima which has as its parts the endothelium of endocardium and the fibroelastic connective tissue that surrounds the cavity of a cardiac chamber. // Layer that lines the lumen of the heart." [Wikipedia:Endocardium, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Endocardium" EXACT []
xref: BTO:0000387
xref: EFO:0000821 ! endocardium
xref: FMA:7280 ! Endocardium
xref: GAID:550 ! endocardium
xref: galen:Endocardium
xref: MAT:0000455 ! endocardium
xref: OpenCyc:Mx4rsWA75K1cEduAAADggVaqvw
xref: TAO:0001320 ! endocardium
xref: XAO:0000066 ! endocardium
xref: ZFA:0001320 ! endocardium
is_a: UBERON:0000479 ! portion of tissue
relationship: develops_from UBERON:0003084 ! fused heart primordium
relationship: part_of UBERON:0000948 ! heart
xref: ncithesaurus:Endocardium ! Endocardium

[Term]
id: UBERON:0002166
name: endocardium of atrium
alt_id: UBERON:FMA_7284-MA_0000077-ZFA_0001614
def: "Endocardium that is part of the atrium." [ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
synonym: "Atrial endocardium" EXACT []
synonym: "atrial endocardium" EXACT []
synonym: "atrium endocardium" EXACT []
synonym: "Endocardium of atrium" EXACT []
xref: FMA:7284 ! Endocardium of atrium
xref: HOG:0000606 ! atrium endocardium
xref: MA:0000077 ! atrium endocardium
xref: ZFA:0001614 ! atrial endocardium
is_a: UBERON:0002165 ! endocardium
intersection_of: UBERON:0002165 ! endocardium
intersection_of: part_of UBERON:0002081 ! cardiac atrium
relationship: part_of UBERON:0002081 ! cardiac atrium

[Term]
id: UBERON:0002167
name: right lung
alt_id: UBERON:FMA_7309-MA_0000426
def: "Lung which consists of the right upper lobe, middle lobe and right lower lobe." [Wikipedia:Right_lung]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Right lung" EXACT []
xref: EHDAA:4969 ! right lung
xref: FMA:7309 ! Right lung
xref: HOG:0000301 ! right lung
xref: MA:0000426 ! right lung
is_a: UBERON:0002048 ! lung
xref: ncithesaurus:Right_Lung ! Right Lung

[Term]
id: UBERON:0002168
name: left lung
alt_id: UBERON:FMA_7310-MA_0000425
def: "Lung which consists of the left upper lobe and left lower lobe." [Wikipedia:Left_lung]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Left lung" EXACT []
xref: EHDAA:4947 ! left lung
xref: FMA:7310 ! Left lung
xref: HOG:0000618 ! left lung
xref: MA:0000425 ! left lung
is_a: UBERON:0002048 ! lung
xref: ncithesaurus:Left_Lung ! Left Lung

[Term]
id: UBERON:0002169
name: alveolar sac
alt_id: UBERON:FMA_7317-MA_0000418
def: "." [Wikipedia:Alveolar_sac]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Alveolar sac" EXACT []
synonym: "Sacculus alveolaris" EXACT []
synonym: "sacculus alveolaris" EXACT []
xref: BTO:0000061
xref: FMA:7317 ! Alveolar sac
xref: MA:0000418 ! alveolar sac
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0002048 ! lung
xref: ncithesaurus:Alveolar_Sac ! Alveolar Sac

[Term]
id: UBERON:0002170
name: upper lobe of right lung
alt_id: UBERON:FMA_7333-MA_0000429
comment: This class was created automatically from a combination of ontologies
synonym: "right lung cranial lobe" EXACT []
synonym: "right lung superior lobe" RELATED []
synonym: "Right upper lobe" EXACT []
synonym: "right upper lobe" EXACT []
synonym: "Right upper lobe of lung" EXACT []
synonym: "right upper lobe of lung" EXACT []
synonym: "Superior lobe of right lung" EXACT []
synonym: "superior lobe of right lung" EXACT []
synonym: "Upper lobe of right lung" EXACT []
xref: FMA:7333 ! Upper lobe of right lung
xref: HOG:0000859 ! right lung cranial lobe
xref: MA:0000429 ! right lung cranial lobe
is_a: UBERON:0000101 ! lobe of lung
relationship: part_of UBERON:0002167 ! right lung

[Term]
id: UBERON:0002171
name: lower lobe of right lung
alt_id: UBERON:FMA_7337-MA_0000428
comment: This class was created automatically from a combination of ontologies
synonym: "Inferior lobe of right lung" EXACT []
synonym: "inferior lobe of right lung" EXACT []
synonym: "Lower lobe of right lung" EXACT []
synonym: "Right lower lobe" EXACT []
synonym: "right lower lobe" EXACT []
synonym: "Right lower lobe of lung" EXACT []
synonym: "right lower lobe of lung" EXACT []
synonym: "right lung caudal lobe" EXACT []
synonym: "right lung inferior lobe" RELATED []
xref: FMA:7337 ! Lower lobe of right lung
xref: HOG:0000857 ! right lung caudal lobe
xref: MA:0000428 ! right lung caudal lobe
is_a: UBERON:0000101 ! lobe of lung
relationship: part_of UBERON:0002167 ! right lung

[Term]
id: UBERON:0002172
name: alveolar atrium
alt_id: UBERON:FMA_7340-MA_0000419
comment: This class was created automatically from a combination of ontologies
synonym: "Alveolar atrium" EXACT []
synonym: "Atrium alveolare" EXACT []
synonym: "atrium alveolare" EXACT []
synonym: "Atrium of alveolus" EXACT []
synonym: "atrium of alveolus" EXACT []
xref: FMA:7340 ! Alveolar atrium
xref: MA:0000419 ! alveolar atrium
is_a: UBERON:0001050 ! atrium
intersection_of: UBERON:0001050 ! atrium
intersection_of: part_of UBERON:0002299 ! alveolus of lung

[Term]
id: UBERON:0002173
name: alveolar duct
alt_id: UBERON:FMA_7341-MA_0000417
def: "." [Wikipedia:Alveolar_duct]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Alveolar duct" EXACT []
xref: FMA:7341 ! Alveolar duct
xref: MA:0000417 ! alveolar duct
xref: OpenCyc:Mx4rvXmfV5wpEbGdrcN5Y29ycA
is_a: UBERON:0000058 ! duct
relationship: part_of UBERON:0002048 ! lung
xref: ncithesaurus:Alveolar_Duct ! Alveolar Duct

[Term]
id: UBERON:0002174
name: middle lobe of lung
alt_id: UBERON:FMA_7383-MA_0000430
def: "." [Wikipedia:Middle_lobe_of_right_lung]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Intermediate lobe of right lung" EXACT []
synonym: "intermediate lobe of right lung" EXACT []
synonym: "Middle lobe of lung" EXACT []
synonym: "Middle lobe of right lung" EXACT []
synonym: "middle lobe of right lung" EXACT []
synonym: "right lung middle lobe" EXACT []
synonym: "Right lung, middle lobe" EXACT []
synonym: "right lung, middle lobe" EXACT []
synonym: "Right middle lobe" EXACT []
synonym: "right middle lobe" EXACT []
synonym: "Right middle lobe of lung" EXACT []
synonym: "right middle lobe of lung" EXACT []
xref: FMA:7383 ! Middle lobe of lung
xref: MA:0000430 ! right lung middle lobe
is_a: UBERON:0000101 ! lobe of lung
relationship: part_of UBERON:0002167 ! right lung

[Term]
id: UBERON:0002175
name: intermediolateral nucleus
alt_id: UBERON:FMA_73915-MA_0002753
def: "." [Wikipedia:Intermediolateral_nucleus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Intermediolateral nucleus" EXACT []
synonym: "Intermediolateral nucleus of spinal cord" EXACT []
synonym: "intermediolateral nucleus of spinal cord" EXACT []
synonym: "spinal cord intermediolateral nucleus" EXACT []
xref: FMA:73915 ! Intermediolateral nucleus
xref: MA:0002753 ! spinal cord intermediolateral nucleus
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0002240 ! spinal cord

[Term]
id: UBERON:0002176
name: lateral cervical nucleus
alt_id: UBERON:FMA_73921-MA_0002755
comment: This class was created automatically from a combination of ontologies
synonym: "Lateral cervical nucleus" EXACT []
xref: FMA:73921 ! Lateral cervical nucleus
xref: MA:0002755 ! lateral cervical nucleus
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0002256 ! dorsal horn of spinal cord

[Term]
id: UBERON:0002177
name: right main bronchus
alt_id: UBERON:FMA_7395-MA_0001849
def: "." [Wikipedia:Right_main_bronchus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Right bronchus" EXACT []
synonym: "right bronchus" EXACT []
synonym: "Right main bronchus" EXACT []
synonym: "Right principal bronchus" EXACT []
synonym: "right principal bronchus" EXACT []
xref: FMA:7395 ! Right main bronchus
xref: MA:0001849 ! right main bronchus
is_a: UBERON:0002182 ! main bronchus
xref: ncithesaurus:Right_Main_Bronchus ! Right Main Bronchus

[Term]
id: UBERON:0002178
name: left main bronchus
alt_id: UBERON:FMA_7396-MA_0001843
def: "." [Wikipedia:Left_main_bronchus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Left bronchus" EXACT []
synonym: "left bronchus" EXACT []
synonym: "Left main bronchus" EXACT []
synonym: "Left principal bronchus" EXACT []
synonym: "left principal bronchus" EXACT []
xref: FMA:7396 ! Left main bronchus
xref: MA:0001843 ! left main bronchus
is_a: UBERON:0002182 ! main bronchus
xref: ncithesaurus:Left_Main_Bronchus ! Left Main Bronchus

[Term]
id: UBERON:0002179
name: lateral funiculus
alt_id: UBERON:FMA_74000-ZFA_0000533
def: "." [Wikipedia:Lateral_funiculus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Lateral funiculus" EXACT []
synonym: "Lateral funiculus of spinal cord" EXACT []
synonym: "lateral funiculus of spinal cord" EXACT []
xref: FMA:74000 ! Lateral funiculus of spinal cord
xref: TAO:0000533 ! lateral funiculus
xref: ZFA:0000533 ! lateral funiculus
is_a: UBERON:0000122 ! nerve fiber bundle
relationship: part_of UBERON:0002240 ! spinal cord

[Term]
id: UBERON:0002180
name: ventral funiculus
alt_id: UBERON:FMA_74003-ZFA_0000605
def: "." [Wikipedia:Ventral_funiculus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Anterior funiculus of spinal cord" EXACT []
synonym: "anterior funiculus of spinal cord" EXACT []
synonym: "Ventral funiculus" EXACT []
synonym: "Ventral funiculus of spinal cord" EXACT []
synonym: "ventral funiculus of spinal cord" EXACT []
xref: FMA:74003 ! Ventral funiculus of spinal cord
xref: TAO:0000605 ! ventral funiculus
xref: ZFA:0000605 ! ventral funiculus
is_a: UBERON:0000122 ! nerve fiber bundle
relationship: part_of UBERON:0002240 ! spinal cord

[Term]
id: UBERON:0002181
name: substantia gelatinosa
alt_id: UBERON:FMA_74019-MA_0001124
def: "." [Wikipedia:Substantia_gelatinosa]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Central gelatinous substance of spinal cord" EXACT []
synonym: "central gelatinous substance of spinal cord" EXACT []
synonym: "Gelatinous substance of posterior horn of spinal cord" EXACT []
synonym: "gelatinous substance of posterior horn of spinal cord" EXACT []
synonym: "Substantia gelatinosa" EXACT []
xref: FMA:74019 ! Substantia gelatinosa
xref: GAID:701 ! substantia gelatinosa
xref: MA:0001124 ! substantia gelatinosa
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0002256 ! dorsal horn of spinal cord
xref: ncithesaurus:Substantia_Gelatinosa ! Substantia Gelatinosa

[Term]
id: UBERON:0002182
name: main bronchus
alt_id: UBERON:FMA_7405-MA_0000438
def: "." [Wikipedia:Main_bronchus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Bronchus principalis" EXACT []
synonym: "bronchus principalis" EXACT []
synonym: "Main bronchus" EXACT []
synonym: "Primary bronchus" EXACT []
synonym: "primary bronchus" EXACT []
synonym: "Principal bronchus" EXACT []
synonym: "principal bronchus" EXACT []
xref: EHDAA:3072 ! main bronchus
xref: FMA:7405 ! Main bronchus
xref: HOG:0000370 ! main bronchus
xref: MA:0000438 ! main bronchus
xref: ncithesaurus:Main_Bronchus
is_a: UBERON:0002185 ! bronchus

[Term]
id: UBERON:0002183
name: lobar bronchus
alt_id: UBERON:FMA_7406-MA_0000437
def: "The lobar bronchus is the major airway within the respiratory tree that starts by division of the principal bronchi on both sides and ends at the point of its own subdivision into tertiary or segmental bronchi[GO]." [Wikipedia:Lobar_bronchus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Lobar bronchus" EXACT []
synonym: "Secondary bronchus" EXACT []
synonym: "secondary bronchus" EXACT []
xref: EHDAA:4955 ! lobar bronchus
xref: EHDAA:4963 ! lobar bronchus
xref: EHDAA:4977 ! lobar bronchus
xref: EHDAA:4985 ! lobar bronchus
xref: EHDAA:4993 ! lobar bronchus
xref: EHDAA:8175 ! lobar bronchus
xref: EHDAA:8187 ! lobar bronchus
xref: EHDAA:8203 ! lobar bronchus
xref: EHDAA:8213 ! lobar bronchus
xref: EHDAA:8225 ! lobar bronchus
xref: FMA:7406 ! Lobar bronchus
xref: MA:0000437 ! lobar bronchus
is_a: UBERON:0002185 ! bronchus
relationship: part_of UBERON:0002048 ! lung
xref: ncithesaurus:Lobar_Bronchus ! Lobar Bronchus

[Term]
id: UBERON:0002184
name: segmental bronchus
alt_id: UBERON:FMA_7407-MA_0000439
def: "." [Wikipedia:Segmental_bronchus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Segmental bronchus" EXACT []
synonym: "Tertiary bronchus" EXACT []
synonym: "tertiary bronchus" EXACT []
xref: EHDAA:7043 ! segmental bronchus
xref: EHDAA:7049 ! segmental bronchus
xref: EHDAA:7058 ! segmental bronchus
xref: EHDAA:7064 ! segmental bronchus
xref: EHDAA:7070 ! segmental bronchus
xref: FMA:7407 ! Segmental bronchus
xref: HOG:0001446 ! segmental bronchus
xref: MA:0000439 ! segmental bronchus
is_a: UBERON:0002185 ! bronchus
xref: ncithesaurus:Segmental_Bronchus ! Segmental Bronchus

[Term]
id: UBERON:0002185
name: bronchus
alt_id: UBERON:FMA_7409-MA_0000436-MIAA_0000133-XAO_0000121
def: "The bronchus is the portion of the airway that connects to the lungs[GO]." [Wikipedia:Bronchus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Bronchial trunk" EXACT []
synonym: "bronchial trunk" EXACT []
synonym: "Bronchus" EXACT []
synonym: "main bronchus" RELATED []
xref: BTO:0001340
xref: FMA:7409 ! Bronchus
xref: HOG:0000262 ! bronchus
xref: MA:0000436 ! bronchus
xref: MAT:0000133 ! bronchus
xref: MIAA:0000133 ! bronchus
xref: XAO:0000121 ! bronchus
is_a: UBERON:0000063 ! organ segment
relationship: part_of UBERON:0001558 ! lower respiratory tract
relationship: part_of UBERON:0002224 ! thoracic cavity
xref: ncithesaurus:Bronchus ! Bronchus

[Term]
id: UBERON:0002186
name: bronchiole
alt_id: UBERON:FMA_7410-MA_0000422
def: "the first airway branch that no longer contains cartilage; it is a branch of the bronchi[GO]." [Wikipedia:Bronchiole]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Bronchiole" EXACT []
synonym: "Lobular bronchiole" EXACT []
synonym: "lobular bronchiole" EXACT []
xref: EHDAA:8171 ! bronchiole
xref: EHDAA:8183 ! bronchiole
xref: EHDAA:8199 ! bronchiole
xref: EHDAA:8221 ! bronchiole
xref: FMA:7410 ! Bronchiole
xref: HOG:0000675 ! bronchiole
xref: MA:0000422 ! bronchiole
is_a: UBERON:0000063 ! organ segment
relationship: part_of UBERON:0002048 ! lung
xref: ncithesaurus:Bronchiole ! Bronchiole
xref: BTO:0002375 ! bronchiole

[Term]
id: UBERON:0002187
name: terminal bronchiole
alt_id: UBERON:FMA_7411-MA_0000424
def: "." [Wikipedia:Terminal_bronchiole]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Bronchiolus terminalis" EXACT []
synonym: "bronchiolus terminalis" EXACT []
synonym: "Terminal bronchiole" EXACT []
xref: FMA:7411 ! Terminal bronchiole
xref: MA:0000424 ! terminal bronchiole
is_a: UBERON:0002186 ! bronchiole
xref: ncithesaurus:Terminal_Bronchiole ! Terminal Bronchiole
xref: BTO:0003223 ! terminal bronchiole

[Term]
id: UBERON:0002188
name: respiratory bronchiole
alt_id: UBERON:FMA_7412-MA_0000423
def: "." [Wikipedia:Respiratory_bronchiole]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Bronchiolus respiratorius" EXACT []
synonym: "bronchiolus respiratorius" EXACT []
synonym: "Respiratory bronchiole" EXACT []
xref: FMA:7412 ! Respiratory bronchiole
xref: MA:0000423 ! respiratory bronchiole
is_a: UBERON:0002186 ! bronchiole
xref: ncithesaurus:Respiratory_Bronchiole ! Respiratory Bronchiole
xref: BTO:0003222 ! respiratory bronchiole

[Term]
id: UBERON:0002189
name: outer cortex of kidney
alt_id: UBERON:FMA_74285-MA_0001649
comment: This class was created automatically from a combination of ontologies
synonym: "Outer cortex of kidney" EXACT []
synonym: "Outer renal cortex" EXACT []
synonym: "outer renal cortex" EXACT []
xref: FMA:74285 ! Outer cortex of kidney
xref: MA:0001649 ! outer renal cortex
is_a: UBERON:0001225 ! cortex of kidney

[Term]
id: UBERON:0002190
name: subcutaneous adipose tissue
alt_id: UBERON:FMA_74315-MA_0000473
comment: This class was created automatically from a combination of ontologies
synonym: "Fatty layer of subcutaneous tissue" EXACT []
synonym: "fatty layer of subcutaneous tissue" EXACT []
synonym: "Subcutaneous adipose tissue" EXACT []
xref: FMA:74315 ! Subcutaneous adipose tissue
xref: MA:0000473 ! subcutaneous adipose tissue
is_a: UBERON:0001013 ! adipose tissue

[Term]
id: UBERON:0002191
name: subiculum
alt_id: UBERON:FMA_74414-MA_0000960
def: "." [Wikipedia:Subiculum]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Subiculum" EXACT []
synonym: "Subiculum hippocampi" EXACT []
synonym: "subiculum hippocampi" EXACT []
xref: FMA:74414 ! Subiculum
xref: MA:0000960 ! subiculum
xref: NIF_GrossAnatomy:birnlex_1305 ! Subiculum
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001017 ! central nervous system
xref: ncithesaurus:Subiculum ! Subiculum
xref: BTO:0003087 ! subiculum

[Term]
id: UBERON:0002192
name: choroidal fissure
alt_id: UBERON:FMA_74512-MA_0001305-XAO_0000474-ZFA_0001075
def: "A break in the continuity of the optic cup where the two sides of the cup meet." [ISBN:0815318960]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Chorioid fissure" EXACT []
synonym: "chorioid fissure" EXACT []
synonym: "Choroid fissure" EXACT []
synonym: "choroid fissure" EXACT []
synonym: "Choroidal fissure" EXACT []
xref: EHDAA:4759 ! choroid fissure
xref: FMA:74512 ! Choroidal fissure
xref: HOG:0000655 ! choroid fissure
xref: MA:0001305 ! choroid fissure
xref: TAO:0001075 ! choroid fissure
xref: XAO:0000474 ! choroid fissure
xref: ZFA:0001075 ! choroid fissure
is_a: UBERON:0000464 ! anatomical space
relationship: part_of UBERON:0000966 ! retina
xref: ncithesaurus:Choroidal_Fissure ! Choroidal Fissure

[Term]
id: UBERON:0002193
name: hemolymphoid system
alt_id: UBERON:FMA_74562-MA_0000013
def: "Anatomical cluster consisting of the hematopoietic system and the lymphoid system, or its analogs." []
comment: This class was created automatically from a combination of ontologies
synonym: "Haemolymphoid system" EXACT []
synonym: "haemolymphoid system" RELATED []
synonym: "Hematolymphoid system" EXACT []
synonym: "hematolymphoid system" EXACT []
synonym: "Hemolymphoid system" EXACT []
synonym: "Lymphomyeloid complex" EXACT []
synonym: "lymphomyeloid complex" EXACT []
xref: FMA:74562 ! Hemolymphoid system
xref: MA:0000013 ! hemolymphoid system
is_a: UBERON:0000477 ! anatomical cluster

[Term]
id: UBERON:0002194
name: capsule of lymph node
alt_id: UBERON:FMA_74604-MA_0000739
def: "Capsule surrounding lymph node composed of connective tissue with some plain muscle fibers. from its internal surface are given off a number of membranous processes or trabeculae, consisting, in man, of connective tissue, with a small admixture of plain muscle fibers; but in many of the lower animals composed almost entirely of involuntary muscle[WP]." [Wikipedia:Lymph_node_capsule]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Capsule of lymph node" EXACT []
synonym: "Lymph node capsule" EXACT []
synonym: "lymph node capsule" EXACT []
xref: FMA:74604 ! Capsule of lymph node
xref: MA:0000739 ! lymph node capsule
is_a: UBERON:0003893 ! capsule
relationship: part_of UBERON:0000029 ! lymph node
intersection_of: UBERON:0003893 ! capsule
intersection_of: part_of UBERON:0000029 ! lymph node
relationship: has_part UBERON:0002384 ! connective tissue
xref: ncithesaurus:Lymph_Node_Capsule ! Lymph Node Capsule

[Term]
id: UBERON:0003893 ! capsule
name: capsule
xref: FMA:85272 ! Capsule 
def: "a cover or envelope partly or wholly surrounding a structure. Examples: egg shell, articular capsules, renal capsules[WP]." [Wikipedia:Capsule_(anatomy)]
is_a: UBERON:0000158 ! membranous layer

[Term]
id: UBERON:0002195
name: trabecula of lymph node
def: "Membranous process coming from capsule of lymph node[WP]." [Wikipedia:Lymph_node_trabeculae]
alt_id: UBERON:FMA_74605-MA_0000746
comment: This class was created automatically from a combination of ontologies
synonym: "Lymph node trabecula" EXACT []
synonym: "lymph node trabecula" EXACT []
synonym: "lymph node trabeculum" EXACT []
synonym: "Trabecula of lymph node" EXACT []
xref: FMA:74605 ! Trabecula of lymph node
xref: MA:0000746 ! lymph node trabeculum
is_a: UBERON:0000440 ! trabecula
relationship: part_of UBERON:0000029 ! lymph node
xref: ncithesaurus:Lymph_Node_Trabecula ! Lymph Node Trabecula

[Term]
id: UBERON:0002196
name: adenohypophysis
alt_id: UBERON:FMA_74627-MA_0000177-ZFA_0001282
def: "The anterior lobe of the hypophysis (pituitary gland). This lobe contains cells that produce prolactin, growth hormone, thyroid-stimulating hormone, follicle-stimulating hormone and proopiomelanocortin. In contrast to mamalian vertebrates, the adenohypophysis remains in a subepithelial position and there exists no equivalent of Rathke's pouch in zebrafish. <a href='http://zfin.org/cgi-bin/ZFIN_jump?record=ZDB-PUB-040202-1'>Herzog et al, 2004.</a>" [Wikipedia:Adenohypophysis, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Adenohypophysis" EXACT []
synonym: "Anterior lobe (hypophysis)" EXACT []
synonym: "anterior lobe (hypophysis)" EXACT []
synonym: "Anterior lobe of hypophysis" EXACT []
synonym: "anterior lobe of hypophysis" EXACT []
synonym: "Anterior lobe of pituitary" EXACT []
synonym: "anterior lobe of pituitary" EXACT []
synonym: "Anterior lobe of pituitary gland" EXACT []
synonym: "anterior lobe of pituitary gland" EXACT []
synonym: "anterior pituitary" EXACT []
synonym: "Pituitary gland, anterior lobe" EXACT []
synonym: "pituitary gland, anterior lobe" EXACT []
xref: BTO:0000040
xref: EFO:0000230 ! adenohypophysis
xref: FMA:74627 ! Adenohypophysis
xref: HOG:0000141 ! adenohypophysis
xref: MA:0000177 ! adenohypophysis
xref: NIF_GrossAnatomy:birnlex_1581 ! Adenohypophysis
xref: TAO:0001282 ! adenohypophysis
xref: ZFA:0001282 ! adenohypophysis
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0000007 ! pituitary gland

[Term]
id: UBERON:0002197
name: median eminence of neurohypophysis
alt_id: UBERON:FMA_74634-MA_0000859
def: "." [Wikipedia:Median_eminence]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Median eminence" EXACT []
synonym: "median eminence" EXACT []
synonym: "Median eminence of hypothalamus" EXACT []
synonym: "median eminence of hypothalamus" EXACT []
synonym: "Median eminence of neurohypophysis" EXACT []
synonym: "Median eminence of posterior lobe of pituitary gland" EXACT []
synonym: "median eminence of posterior lobe of pituitary gland" EXACT []
synonym: "Median eminence of tuber cinereum" EXACT []
synonym: "median eminence of tuber cinereum" EXACT []
xref: EHDAA:7540 ! median eminence
xref: FMA:74634 ! Median eminence of neurohypophysis
xref: GAID:463 ! median eminence
xref: HOG:0001179 ! median eminence
xref: MA:0000859 ! median eminence
xref: NIF_GrossAnatomy:birnlex_925 ! Median eminence
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001016 ! nervous system
xref: BTO:0001954 ! median eminence

[Term]
id: UBERON:0002198
name: neurohypophysis
alt_id: UBERON:FMA_74636-ZFA_0001271
def: "comprises the posterior lobe of the pituitary gland and is part of the endocrine system[WP]. part of the pituitary gland that secretes hormones involved in blood pressure regulation[GO]." [Wikipedia:Neurohypophysis]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "neurohypophysis" EXACT []
synonym: "pituitary gland, posterior lobe" EXACT []
synonym: "posterior lobe of pituitary" EXACT []
synonym: "posterior pituitary" EXACT []
xref: BTO:0000937
xref: EHDAA:7536 ! neurohypophysis
xref: HOG:0000142 ! neurohypophysis
xref: NIF_GrossAnatomy:birnlex_1586 ! Neurohypophysis
xref: TAO:0001271 ! neurohypophysis
xref: ZFA:0001271 ! neurohypophysis
is_a: UBERON:0002616 ! regional part of brain
relationship: part_of UBERON:0000007 ! pituitary gland
xref: MA:0000178 ! neurohypophysis
xref: FMA:74628 ! Neurohypophysis

[Term]
id: UBERON:0002199
name: integument
alt_id: UBERON:FMA_74657-ZFA_0000368
def: "Organ system subdivision which consists of the skin and the superficial fascia. Examples: There is only one integument. // The outer protective barrier that separates the animal from its aquatic environment. <a href='http://zfin.org/cgi-bin/ZFIN_jump?record=ZDB-PUB-040726-12'>Le Guellec et al, 2004.</a>" [Wikipedia:Integument, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Integument" EXACT []
synonym: "skin" RELATED []
synonym: "The integument" EXACT []
synonym: "the integument" EXACT []
xref: AAO:0000239 ! integument
xref: BTO:0000634
xref: FMA:74657 ! Integument
xref: galen:Integument
xref: HAO:0000421 ! integument
xref: TAO:0000368 ! integument
xref: ZFA:0000368 ! integument
is_a: UBERON:0003102 ! surface structure
relationship: part_of UBERON:0002416 ! integumental system

[Term]
id: UBERON:0002200
name: vasculature of head
alt_id: UBERON:FMA_74710-ZFA_0001267
comment: This class was created automatically from a combination of ontologies
synonym: "cranial vasculature" EXACT []
synonym: "Head vasculature" EXACT []
synonym: "head vasculature" RELATED []
synonym: "Vasculature of head" EXACT []
xref: FMA:74710 ! Vasculature of head
xref: TAO:0001267 ! cranial vasculature
xref: ZFA:0001267 ! cranial vasculature
is_a: UBERON:0002049 ! vasculature
intersection_of: UBERON:0002049 ! vasculature
intersection_of: part_of UBERON:0000033 ! head

[Term]
id: UBERON:0002201
name: vasculature of trunk
alt_id: UBERON:FMA_74712-ZFA_0005024
comment: This class was created automatically from a combination of ontologies
synonym: "Trunk vasculature" EXACT []
synonym: "trunk vasculature" EXACT []
synonym: "Vasculature of trunk" EXACT []
xref: FMA:74712 ! Vasculature of trunk
xref: TAO:0005024 ! trunk vasculature
xref: ZFA:0005024 ! trunk vasculature
is_a: UBERON:0002049 ! vasculature
intersection_of: UBERON:0002049 ! vasculature
intersection_of: part_of UBERON:0002100 ! trunk

[Term]
id: UBERON:0002202
name: submucosa of trachea
alt_id: UBERON:FMA_7472-MA_0001860
comment: This class was created automatically from a combination of ontologies
synonym: "Submucosa of trachea" EXACT []
synonym: "trachea submucosa" EXACT []
synonym: "Tracheal submucosa" EXACT []
synonym: "tracheal submucosa" EXACT []
xref: FMA:7472 ! Submucosa of trachea
xref: MA:0001860 ! trachea submucosa
is_a: UBERON:0000009 ! submucosa
intersection_of: UBERON:0000009 ! submucosa
intersection_of: part_of UBERON:0001005 ! trachea
relationship: part_of UBERON:0001005 ! trachea
xref: ncithesaurus:Trachea_Submucosa ! Trachea Submucosa

[Term]
id: UBERON:0002203
name: vasculature of eye
alt_id: UBERON:FMA_74743-ZFA_0007057
comment: This class was created automatically from a combination of ontologies
synonym: "Eye vasculature" EXACT []
synonym: "eye vasculature" RELATED []
synonym: "ocular vasculature" EXACT []
synonym: "optic vasculature" RELATED []
synonym: "Vasculature of eye" EXACT []
xref: FMA:74743 ! Vasculature of eye
xref: ZFA:0007057 ! ocular vasculature
is_a: UBERON:0002200 ! vasculature of head
intersection_of: UBERON:0002049 ! vasculature
intersection_of: part_of UBERON:0000970 ! eye

[Term]
id: UBERON:0002204
name: musculoskeletal system
alt_id: UBERON:FMA_7482-MA_0002418-XAO_0000168
def: "Anatomical system that provides locomotion and physical support to the organism." [Wikipedia:Musculoskeletal_system, XB:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Musculo-skeletal system" EXACT []
synonym: "musculo-skeletal system" EXACT []
synonym: "Musculoskeletal system" EXACT []
xref: FMA:7482 ! Musculoskeletal system
xref: GAID:98 ! musculoskeletal system
xref: HOG:0001275 ! musculoskeletal system
xref: MA:0002418 ! musculoskeletal system
xref: OpenCyc:Mx4rQRpVNgAKEdyHxgDggVfs8g
xref: XAO:0000168 ! musculoskeletal system
is_a: UBERON:0000467 ! anatomical system
disjoint_from: UBERON:0000075 ! subdivision of skeleton
disjoint_from: UBERON:0000949 ! endocrine system
disjoint_from: UBERON:0000990 ! reproductive system
disjoint_from: UBERON:0001004 ! respiratory system
disjoint_from: UBERON:0001007 ! digestive system
disjoint_from: UBERON:0001008 ! urinary system
disjoint_from: UBERON:0001009 ! circulatory system
disjoint_from: UBERON:0001016 ! nervous system
disjoint_from: UBERON:0001032 ! sense organ system
disjoint_from: UBERON:0001033 ! gustatory system
disjoint_from: UBERON:0001434 ! skeleton
disjoint_from: UBERON:0002294 ! biliary system
disjoint_from: UBERON:0002330 ! exocrine system
disjoint_from: UBERON:0002390 ! hematopoietic system
disjoint_from: UBERON:0002405 ! immune system
disjoint_from: UBERON:0002416 ! integumental system
disjoint_from: UBERON:0002423 ! hepatobiliary system
relationship: develops_from UBERON:0000926 ! mesoderm
xref: ncithesaurus:Musculoskeletal_System ! Musculoskeletal System

[Term]
id: UBERON:0002205
name: manubrium
alt_id: UBERON:FMA_7486-ZFA_0001601
def: "." [Wikipedia:Manubrium]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "anterior process" RELATED []
synonym: "horiztonal process" RELATED []
synonym: "Manubrium" EXACT []
synonym: "manubrium incudus" RELATED []
synonym: "Manubrium of sternum" EXACT []
synonym: "manubrium of sternum" EXACT []
xref: AAO:0000680 ! manubrium
xref: FMA:7486 ! Manubrium
xref: GAID:247 ! manubrium
xref: OpenCyc:Mx4rvXOLAZwpEbGdrcN5Y29ycA
xref: TAO:0001553 ! manubrium
xref: ZFA:0001601 ! manubrium
relationship: part_of UBERON:0000975 ! vertebrate sternum

[Term]
id: UBERON:0002206
name: mammillary body
alt_id: UBERON:FMA_74877-MA_0000174
def: "The mammilary body is a protrusion at the posterior end of the hypothalamus that contains hypothalamic nuclei[GO]." [Wikipedia:Mammillary_body]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Mamillary body" EXACT []
synonym: "mamillary body" EXACT []
synonym: "Mammillary body" EXACT []
xref: FMA:74877 ! Mammillary body
xref: GAID:652 ! mamillary body
xref: MA:0000174 ! mammillary body
xref: NIF_GrossAnatomy:birnlex_865 ! Mammillary body
xref: ZFA:0000334 ! corpus mamillare
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001894 ! diencephalon
xref: ncithesaurus:Mamillary_Body ! Mamillary Body

[Term]
id: UBERON:0002207
name: xiphoid process
alt_id: UBERON:FMA_7488-MA_0001884
def: "." [Wikipedia:Xiphoid_process]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "xiphoid cartilage" EXACT []
synonym: "Xiphoid process" EXACT []
synonym: "Xiphoid process of sternum" EXACT []
synonym: "xiphoid process of sternum" EXACT []
xref: FMA:7488 ! Xiphoid process
xref: MA:0001884 ! xiphoid cartilage
is_a: UBERON:0002236 ! costal cartilage
relationship: part_of UBERON:0000975 ! vertebrate sternum
xref: ncithesaurus:Xiphoid_Process ! Xiphoid Process

[Term]
id: UBERON:0002208
name: sternebra
alt_id: UBERON:FMA_7489-MA_0001333
def: "." [Wikipedia:Sternebra]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Sternebra" EXACT []
xref: FMA:7489 ! Sternebra
xref: MA:0001333 ! sternebra
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0000975 ! vertebrate sternum

[Term]
id: UBERON:0002209
name: fibrous joint
alt_id: UBERON:FMA_7492-MA_0000321
def: "Nonsynovial joint in which the articulating bones or cartilages are connected by ligaments. Examples: sagittal suture, inferior tibiofibular syndesmosis, gomphosis." [Wikipedia:Fibrous_joint]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Articulatio fibrosa" EXACT []
synonym: "articulatio fibrosa" EXACT []
synonym: "Fibrous joint" EXACT []
xref: FMA:7492 ! Fibrous joint
xref: MA:0000321 ! fibrous joint
is_a: UBERON:0000982 ! joint
xref: ZFA:0005156 ! fibrous joint

[Term]
id: UBERON:0002210
name: syndesmosis
alt_id: UBERON:FMA_7494-MA_0001500
def: "Fibrous joint in which the articulating bones or cartilages of the vertebral column and the limbs as well as articulating ossicles, are connected by skeletal ligaments or membranes. Examples: Intervertebral syndesmosis, inferior tibiofibular joint." [Wikipedia:Syndesmosis]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Syndesmosis" EXACT []
xref: FMA:7494 ! Syndesmosis
xref: MA:0001500 ! syndesmosis
is_a: UBERON:0002209 ! fibrous joint
is_a: UBERON:0002213 ! cartilaginous joint

[Term]
id: UBERON:0002211
name: segment of nerve
alt_id: UBERON:FMA_74941-ZFA_0001328
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Neural segment" EXACT []
synonym: "neural segment" RELATED []
xref: FMA:74941 ! Segment of nerve
is_a: UBERON:0000063 ! organ segment
relationship: part_of UBERON:0001021 ! nerve

[Term]
id: UBERON:0002212
name: macula of saccule of membranous labyrinth
alt_id: UBERON:FMA_74944-MA_0001201
def: "." [Wikipedia:Macula_of_saccule]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Macula of saccule" EXACT []
synonym: "macula of saccule" EXACT []
synonym: "Macula of saccule of membranous labyrinth" EXACT []
synonym: "Saccular macula of membranous labyrinth" EXACT []
synonym: "saccular macula of membranous labyrinth" EXACT []
synonym: "saccular maculs" RELATED []
xref: FMA:74944 ! Macula of saccule of membranous labyrinth
xref: MA:0001201 ! macula of saccule
xref: ZFA:0007000 ! macula saccule
is_a: UBERON:0000054 ! macula
intersection_of: UBERON:0000054 ! macula
intersection_of: part_of UBERON:0001854 ! saccule of membranous labyrinth
relationship: part_of UBERON:0001854 ! saccule of membranous labyrinth
xref: ncithesaurus:Macula_of_Saccule ! Macula of Saccule

[Term]
id: UBERON:0002213
name: cartilaginous joint
alt_id: UBERON:FMA_7496-MA_0000320
def: "Nonsynovial joint in which the articulating bones or cartilages are connected by cartilage. Examples: Spheno-occipital synchondrosis, first sternocostal joint, pubic symphysis." [Wikipedia:Cartilaginous_joint]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Articulatio cartilaginea" EXACT []
synonym: "articulatio cartilaginea" EXACT []
synonym: "Cartilaginous joint" EXACT []
xref: FMA:7496 ! Cartilaginous joint
xref: MA:0000320 ! cartilaginous joint
is_a: UBERON:0000982 ! joint
xref: ZFA:0005155 ! cartilaginous joint

[Term]
id: UBERON:0002214
name: macula of utricle of membranous labyrinth
alt_id: UBERON:FMA_74960-MA_0001203
def: "." [Wikipedia:Macula_of_utricle]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Macula of utricle" EXACT []
synonym: "macula of utricle" EXACT []
synonym: "Macula of utricle of membranous labyrinth" EXACT []
synonym: "utricular macula" RELATED []
xref: FMA:74960 ! Macula of utricle of membranous labyrinth
xref: MA:0001203 ! macula of utricle
xref: ZFA:0000030 ! macula utricle
is_a: UBERON:0000054 ! macula
intersection_of: UBERON:0000054 ! macula
intersection_of: part_of UBERON:0001853 ! utricle of membranous labyrinth
relationship: part_of UBERON:0001853 ! utricle of membranous labyrinth
xref: ncithesaurus:Macula_of_Utricle ! Macula of Utricle

[Term]
id: UBERON:0002215
name: synchondrosis
alt_id: UBERON:FMA_7497-MA_0001501
def: "Cartilaginous joint in which the articulating bones or cartilages are connected by hyaline cartilage. Examples: spheno-occipital synchondrosis, first sternocostal joint." [Wikipedia:Synchondrosis]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Epiphysial cartilage" EXACT []
synonym: "epiphysial cartilage" EXACT []
synonym: "Primary cartilaginous joint" EXACT []
synonym: "primary cartilaginous joint" EXACT []
synonym: "Synchondrosis" EXACT []
xref: FMA:7497 ! Synchondrosis
xref: MA:0001501 ! synchondrosis
is_a: UBERON:0002209 ! fibrous joint
is_a: UBERON:0002213 ! cartilaginous joint

[Term]
id: UBERON:0002216
name: symphysis
alt_id: UBERON:FMA_7498-MA_0001504
def: "Cartilaginous joint in which the articulating bones or cartilages are connected by fibrocartilage. Examples: pubic symphysis, intervertebral symphysis, manubriosternal joint." [Wikipedia:Symphysis]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Secondary cartilaginous joint" EXACT []
synonym: "secondary cartilaginous joint" EXACT []
synonym: "Symphysis" EXACT []
xref: FMA:7498 ! Symphysis
xref: MA:0001504 ! symphysis
is_a: UBERON:0002209 ! fibrous joint
is_a: UBERON:0002213 ! cartilaginous joint

[Term]
id: UBERON:0002217
name: synovial joint
alt_id: UBERON:FMA_7501-MA_0000322
def: "Joint in which the articulating bones or cartilages are connected by an articular capsule which encloses a synovial membrane and a synovial cavity. Examples: Temporomandibular joint, knee joint." [Wikipedia:Synovial_joint]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Articulatio synoviale" EXACT []
synonym: "articulatio synoviale" EXACT []
synonym: "Synovial joint" EXACT []
xref: FMA:7501 ! Synovial joint
xref: MA:0000322 ! synovial joint
xref: OpenCyc:Mx4rv2bBV5wpEbGdrcN5Y29ycA
is_a: UBERON:0000982 ! joint
xref: ZFA:0005153 ! synovial joint

[Term]
id: UBERON:0002218
name: tympanic ring
alt_id: UBERON:FMA_75053-MA_0001225
comment: This class was created automatically from a combination of ontologies
synonym: "Tympanic ring" EXACT []
xref: FMA:75053 ! Tympanic ring
xref: MA:0001225 ! tympanic ring
is_a: UBERON:0000061 ! anatomical structure
relationship: part_of UBERON:0001756 ! middle ear
relationship: part_of UBERON:0002204 ! musculoskeletal system

[Term]
id: UBERON:0002219
name: subfornical organ
alt_id: UBERON:FMA_75260-MA_0000940
def: "." [Wikipedia:Subfornical_organ]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Subfornical organ" EXACT []
xref: FMA:75260 ! Subfornical organ
xref: GAID:795 ! subfornical organ
xref: MA:0000940 ! subfornical organ
is_a: UBERON:0000062 ! organ
relationship: part_of UBERON:0001016 ! nervous system

[Term]
id: UBERON:0002221
name: fontanelle
alt_id: UBERON:FMA_75438-MA_0001465
def: "." [Wikipedia:Fontanelle]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "fontanel" EXACT []
synonym: "Fontanelle" EXACT []
xref: FMA:75438 ! Fontanelle
xref: MA:0001465 ! fontanel
xref: TAO:0001738 ! fontanel
is_a: UBERON:0000061 ! anatomical structure
relationship: part_of UBERON:0000033 ! head
xref: ncithesaurus:Fontanelle ! Fontanelle

[Term]
id: UBERON:0002222
name: perichondrium
alt_id: UBERON:FMA_75446-ZFA_0001634
def: "Portion of connective tissue which surrounds cartilage." [Wikipedia:Perichondrium, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "cartilage connective tissue" RELATED []
synonym: "Perichondrium" EXACT []
xref: FMA:75446 ! Perichondrium
xref: TAO:0001643 ! perichondrium
xref: ZFA:0001634 ! perichondrium
is_a: UBERON:0000479 ! portion of tissue

[Term]
id: UBERON:0002223
name: endolymphatic sac
alt_id: UBERON:FMA_75639-MA_0001188
def: "." [Wikipedia:Endolymphatic_sac]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Endolymphatic sac" EXACT []
xref: EHDAA:7761 ! endolymphatic sac
xref: FMA:75639 ! Endolymphatic sac
xref: GAID:887 ! endolymphatic sac
xref: HOG:0000791 ! endolymphatic sac
xref: MA:0001188 ! endolymphatic sac
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0002049 ! vasculature

[Term]
id: UBERON:0002224
name: thoracic cavity
alt_id: UBERON:FMA_7565-MA_0000032
def: "Body cavity subdivision which is enclosed by the thoracic wall and the diaphragm. Examples: There is only one thoracic cavity." [Wikipedia:Thoracic_cavity]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Cavity of chest" EXACT []
synonym: "cavity of chest" EXACT []
synonym: "Cavity of thorax" EXACT []
synonym: "cavity of thorax" EXACT []
synonym: "Chest cavity" EXACT []
synonym: "chest cavity" EXACT []
synonym: "Pectoral cavity" EXACT []
synonym: "pectoral cavity" EXACT []
synonym: "Thoracic cavity" EXACT []
xref: FMA:7565 ! Thoracic cavity
xref: GAID:93 ! thoracic cavity
xref: MA:0000032 ! thoracic cavity
xref: OpenCyc:Mx4rmvyleLfEEduAAAACs6hRXg
xref: OpenCyc:Mx4rvhU_TpwpEbGdrcN5Y29ycA
is_a: UBERON:0000464 ! anatomical space
relationship: part_of UBERON:0000915 ! thorax
xref: ncithesaurus:Thoracic_Cavity ! Thoracic Cavity

[Term]
id: UBERON:0002225
name: costal arch
alt_id: UBERON:FMA_7569-MA_0001396
comment: This class was created automatically from a combination of ontologies
synonym: "Costal arch" EXACT []
xref: FMA:7569 ! Costal arch
xref: MA:0001396 ! costal arch
is_a: UBERON:0000464 ! anatomical space
relationship: part_of UBERON:0002228 ! rib
xref: ncithesaurus:Costal_Arch ! Costal Arch

[Term]
id: UBERON:0002226
name: basilar membrane of cochlea
alt_id: UBERON:FMA_75706-MA_0001190
def: "." [Wikipedia:Basilar_membrane]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "basilar membrane" EXACT []
synonym: "Basilar membrane of cochlea" EXACT []
xref: FMA:75706 ! Basilar membrane of cochlea
xref: GAID:872 ! basilar membrane
xref: MA:0001190 ! basilar membrane
xref: NIF_GrossAnatomy:birnlex_2521 ! Basilar membrane
is_a: UBERON:0000476 ! acellular anatomical structure
relationship: part_of UBERON:0001855 ! cochlear duct of membranous labyrinth
xref: ncithesaurus:Basilar_Membrane ! Basilar Membrane

[Term]
id: UBERON:0002227
name: spiral organ of cochlea
alt_id: UBERON:FMA_75715-MA_0001193
def: "." [Wikipedia:Organ_of_Corti]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Cochlear spiral organ" EXACT []
synonym: "cochlear spiral organ" EXACT []
synonym: "Organ of Corti" EXACT []
synonym: "organ of corti" RELATED []
synonym: "Spiral organ" EXACT []
synonym: "spiral organ" EXACT []
synonym: "Spiral organ of cochlea" EXACT []
synonym: "Spiral organ of Corti" EXACT []
synonym: "spiral organ of corti" EXACT []
xref: FMA:75715 ! Spiral organ of cochlea
xref: GAID:772 ! organ of corti
xref: MA:0001193 ! spiral organ
xref: NIF_GrossAnatomy:birnlex_2526 ! Spiral organ of Corti
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001855 ! cochlear duct of membranous labyrinth
xref: ncithesaurus:Organ_of_Corti ! Organ of Corti
xref: BTO:0001691 ! spiral organ

[Term]
id: UBERON:0002228
name: rib
alt_id: UBERON:FMA_7574-MA_0000315-ZFA_0000538
def: "Ribs are intersegmental rod-shaped bones that form in the peritoneal membrane and attach to the vertebral parapophyses. They protect and support internal organs." [Wikipedia:Rib, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "dorsal rib" RELATED []
synonym: "pleural rib" RELATED []
synonym: "Rib" EXACT []
xref: AAO:0000545 ! rib
xref: FMA:7574 ! Rib
xref: GAID:245 ! rib
xref: HOG:0001154 ! rib
xref: MA:0000315 ! rib
xref: OpenCyc:Mx4rvVjNoZwpEbGdrcN5Y29ycA
xref: TAO:0000538 ! rib
xref: ZFA:0000538 ! rib
is_a: UBERON:0002513 ! endochondral bone
relationship: part_of UBERON:0001443 ! chest
relationship: part_of UBERON:0002091 ! appendicular skeleton
relationship: part_of UBERON:0002412 ! vertebra
xref: ncithesaurus:Rib ! Rib

[Term]
id: UBERON:0002229
name: interparietal bone
alt_id: UBERON:FMA_75748-MA_0001467
comment: This class was created automatically from a combination of ontologies
synonym: "Interparietal bone" EXACT []
xref: FMA:75748 ! Interparietal bone
xref: MA:0001467 ! interparietal bone
is_a: UBERON:0001474 ! bone

[Term]
id: UBERON:0002230
name: head of rib
alt_id: UBERON:FMA_7575-MA_0001415
def: "." [Wikipedia:Head_of_rib]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Head of rib" EXACT []
synonym: "Rib head" EXACT []
synonym: "rib head" EXACT []
xref: FMA:7575 ! Head of rib
xref: MA:0001415 ! rib head
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0002228 ! rib
xref: ncithesaurus:Rib_Head ! Rib Head

[Term]
id: UBERON:0002231
name: body of rib
alt_id: UBERON:FMA_7577-MA_0001416
comment: This class was created automatically from a combination of ontologies
synonym: "Body of rib" EXACT []
synonym: "Rib body" EXACT []
synonym: "rib body" EXACT []
synonym: "rib shaft" EXACT []
synonym: "Shaft of rib" EXACT []
synonym: "shaft of rib" EXACT []
xref: FMA:7577 ! Body of rib
xref: MA:0001416 ! rib shaft
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0002228 ! rib
xref: ncithesaurus:Rib_Shaft ! Rib Shaft

[Term]
id: UBERON:0002232
name: olfactory gland
alt_id: UBERON:FMA_75801-MA_0000287
comment: This class was created automatically from a combination of ontologies
synonym: "Olfactory gland" EXACT []
synonym: "Olfactory gland of Bowman" EXACT []
synonym: "olfactory gland of bowman" RELATED []
xref: FMA:75801 ! Olfactory gland
xref: MA:0000287 ! olfactory gland
is_a: UBERON:0002530 ! gland
relationship: part_of UBERON:0001997 ! olfactory epithelium
xref: BTO:0001697 ! olfactory gland

[Term]
id: UBERON:0002233
name: tectorial membrane of cochlea
alt_id: UBERON:FMA_75805-MA_0001199
def: "." [Wikipedia:Tectorial_membrane]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Tectorial membrane" EXACT []
synonym: "tectorial membrane" EXACT []
synonym: "Tectorial membrane of cochlea" EXACT []
synonym: "Tectorial membrane of spiral organ of cochlea" EXACT []
synonym: "tectorial membrane of spiral organ of cochlea" EXACT []
xref: FMA:75805 ! Tectorial membrane of cochlea
xref: GAID:876 ! tectorial membrane
xref: MA:0001199 ! tectorial membrane
xref: NIF_GrossAnatomy:birnlex_2531 ! Tectorial membrane of spiral organ of cochlea
is_a: UBERON:0000476 ! acellular anatomical structure
relationship: part_of UBERON:0001855 ! cochlear duct of membranous labyrinth
xref: ncithesaurus:Tectorial_Membrane ! Tectorial Membrane


[Term]
id: UBERON:0002235
name: tubercle of rib
alt_id: UBERON:FMA_7583-MA_0001417
def: "." [Wikipedia:Tubercle_of_rib]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Rib tubercle" EXACT []
synonym: "rib tubercle" EXACT []
synonym: "Tubercle of rib" EXACT []
xref: FMA:7583 ! Tubercle of rib
xref: MA:0001417 ! rib tubercle
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0002231 ! body of rib
xref: ncithesaurus:Rib_Tubercle ! Rib Tubercle

[Term]
id: UBERON:0002236
name: costal cartilage
alt_id: UBERON:FMA_7591-MA_0000106
def: "." [Wikipedia:Costal_cartilage]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Costal cartilage" EXACT []
xref: FMA:7591 ! Costal cartilage
xref: MA:0000106 ! costal cartilage
is_a: UBERON:0002418 ! cartilage
relationship: part_of UBERON:0002228 ! rib
xref: ncithesaurus:Costal_Cartilage ! Costal Cartilage

[Term]
id: UBERON:0002237
name: true rib
alt_id: UBERON:FMA_7592-MA_0001419
comment: This class was created automatically from a combination of ontologies
synonym: "Costa vera" EXACT []
synonym: "costa vera" EXACT []
synonym: "True rib" EXACT []
xref: FMA:7592 ! True rib
xref: MA:0001419 ! true rib
xref: OpenCyc:Mx4rv4-iWJwpEbGdrcN5Y29ycA
is_a: UBERON:0002228 ! rib

[Term]
id: UBERON:0002238
name: false rib
alt_id: UBERON:FMA_7594-MA_0001398
def: "." [Wikipedia:False_rib]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Costa spuria" EXACT []
synonym: "costa spuria" EXACT []
synonym: "False rib" EXACT []
xref: FMA:7594 ! False rib
xref: MA:0001398 ! false rib
is_a: UBERON:0002228 ! rib

[Term]
id: UBERON:0002239
name: floating rib
alt_id: UBERON:FMA_7595-MA_0001399
def: "." [Wikipedia:Floating_rib]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Costa fluitante" EXACT []
synonym: "costa fluitante" EXACT []
synonym: "Floating rib" EXACT []
xref: FMA:7595 ! Floating rib
xref: MA:0001399 ! floating rib
xref: OpenCyc:Mx4rvaPCWZwpEbGdrcN5Y29ycA
is_a: UBERON:0002238 ! false rib

[Term]
id: UBERON:0002240
name: spinal cord
alt_id: UBERON:FMA_7647-MA_0000216-MIAA_0000183-XAO_0000020-ZFA_0000075
def: "Organ component of neuraxis that has as its parts gray matter and white matter that surround the central canal. Examples: There is only one spinal cord. // Elongated, approximately cylindrical part of the central nervous system that lies in the vertebral canal and from which the spinal nerves emerge." [OMD:spinal+cord, Wikipedia:Spinal_cord]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Spinal cord" EXACT []
xref: BTO:0001279
xref: EFO:0000110 ! spinal cord
xref: EHDAA:2863 ! spinal cord
xref: FMA:7647 ! Spinal cord
xref: GAID:695 ! spinal cord
xref: HOG:0000601 ! spinal cord
xref: MA:0000216 ! spinal cord
xref: MAT:0000183 ! spinal cord
xref: MIAA:0000183 ! spinal cord
xref: NIF_GrossAnatomy:birnlex_1709 ! Spinal cord
xref: OpenCyc:Mx4rvVjjk5wpEbGdrcN5Y29ycA
xref: TAO:0000075 ! spinal cord
xref: XAO:0000020 ! spinal cord
xref: ZFA:0000075 ! spinal cord
is_a: UBERON:0000489 ! cavitated compound organ
relationship: develops_from UBERON:0003076 ! posterior neural tube
relationship: disconnected_from UBERON:0000955 ! brain
relationship: part_of UBERON:0001017 ! central nervous system
relationship: part_of UBERON:0001137 ! back
xref: ncithesaurus:Spinal_Cord ! Spinal Cord

[Term]
id: UBERON:0002241
name: chondrocranium
alt_id: UBERON:FMA_76621-XAO_0003059-ZFA_0001424
def: "Cranial skeletal elements composed of cartilage and cartilage replacement bones." [ISBN:0471209627, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
synonym: "cartilaginous skull" RELATED []
synonym: "chondocranium" RELATED []
synonym: "Chondrocranium" EXACT []
synonym: "neurocranium" RELATED []
xref: AAO:0000094 ! chondrocranium
xref: EHDAA:6031 ! chondrocranium
xref: FMA:76621 ! Chondrocranium
xref: HOG:0000288 ! chondrocranium
xref: MA:0000317 ! chondrocranium
xref: TAO:0001424 ! chondrocranium
xref: XAO:0003059 ! chondrocranium
xref: ZFA:0001424 ! chondrocranium
is_a: UBERON:0000477 ! anatomical cluster
xref: ncithesaurus:Chondrocranium ! Chondrocranium

[Term]
id: UBERON:0002242
name: nucleus pulposus
alt_id: UBERON:FMA_76703-MA_0000112
def: "a jelly-like connective tissue in the middle of the spinal disc. It is the remnant of the notochord. It functions to distribute hydraulic pressure in all directions within each disc under compressive loads. The nucleus pulposus consists of chondrocytes, collagen fibrils, and proteoglycan aggrecans that have hyaluronic long chains which attract water. Attached to each hyaluronic chain are side chains of chondroitin sulfate and keratan sulfate[WP]." [Wikipedia:Nucleus_pulposus]
subset: uberon_slim
synonym: "pulpy nucleus" EXACT []
xref: FMA:76703 ! Nucleus pulposus
xref: MA:0000112 ! nucleus pulposus
is_a: UBERON:0002384 ! connective tissue
relationship: surrounded_by UBERON:0001066 ! intervertebral disk
xref: BTO:0003626 ! nucleus pulposus

[Term]
id: UBERON:0002243
name: cutaneous vein
alt_id: UBERON:FMA_76720-MA_0002098
comment: This class was created automatically from a combination of ontologies
synonym: "Cutaneous vein" EXACT []
xref: FMA:76720 ! Cutaneous vein
xref: MA:0002098 ! cutaneous vein
is_a: UBERON:0001638 ! vein
xref: ncithesaurus:Cutaneous_Vein ! Cutaneous Vein

[Term]
id: UBERON:0002244
name: premaxilla
alt_id: UBERON:FMA_76869-MA_0001493-ZFA_0000567
def: "The premaxilla is a bone of the upper jaw. It is an L-shaped bone first visible as a thin sliver in the anterodorsal region of the upper lip, anterior to the dorsal tip of the maxilla (5.7 mm). In the adult, the premaxilla is ligamentously attached to its counterpart at the midline and the kinethmoid posterodorsally, by the premaxillo-rostroid ligaments. Premaxillary teeth are absent in zebrafish." [Wikipedia:Premaxilla, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Premaxilla" EXACT []
synonym: "premaxillae" RELATED []
xref: AAO:0000461 ! premaxilla
xref: EHDAA:6962 ! premaxilla
xref: EHDAA:8033 ! premaxilla
xref: FMA:76869 ! Premaxilla
xref: HOG:0000426 ! premaxilla
xref: MA:0001493 ! premaxilla
xref: TAO:0000567 ! premaxilla
xref: ZFA:0000567 ! premaxilla
is_a: UBERON:0002514 ! intramembranous bone

[Term]
id: UBERON:0002245
name: hemisphere of cerebellum
alt_id: UBERON:FMA_76925-MA_0000200
def: "." [Wikipedia:Cerebellar_hemisphere]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "cerebellar hemisphere" EXACT []
synonym: "Cerebellum hemisphere" EXACT []
synonym: "cerebellum hemisphere" EXACT []
synonym: "Hemisphere of cerebellum" EXACT []
synonym: "Hemisphere of cerebellum [H II - H X]" EXACT []
synonym: "hemisphere of cerebellum [h ii - h x]" EXACT []
xref: FMA:76925 ! Hemisphere of cerebellum
xref: MA:0000200 ! cerebellar hemisphere
xref: NIF_GrossAnatomy:birnlex_1575 ! Cerebellar hemisphere
is_a: UBERON:0002946 ! regional part of cerebellum
relationship: part_of UBERON:0002129 ! cerebellar cortex

[Term]
id: UBERON:0002246
name: dorsal thoracic nucleus
alt_id: UBERON:FMA_77023-MA_0001121
def: "." [Wikipedia:Clarke's_column]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Clarke's column" EXACT []
synonym: "clarke's column" EXACT []
synonym: "Clarke's nucleus" EXACT []
synonym: "clarke's nucleus" RELATED []
synonym: "Dorsal thoracic nucleus" EXACT []
synonym: "Posterior thoracic nucleus" EXACT []
synonym: "posterior thoracic nucleus" EXACT []
synonym: "spinal cord dorsal nucleus" EXACT []
synonym: "Stilling-Clarke's column" EXACT []
synonym: "stilling-clarke's column" EXACT []
synonym: "Stilling-Clarke's nucleus" EXACT []
synonym: "stilling-clarke's nucleus" EXACT []
xref: FMA:77023 ! Dorsal thoracic nucleus
xref: MA:0001121 ! spinal cord dorsal nucleus
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0002256 ! dorsal horn of spinal cord

[Term]
id: UBERON:0002247
name: uterine horn
alt_id: UBERON:FMA_77053-MA_0000393
def: "." [Wikipedia:Uterine_horn]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Uterine horn" EXACT []
xref: FMA:77053 ! Uterine horn
xref: MA:0000393 ! uterine horn
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0000995 ! uterus

[Term]
id: UBERON:0002248
name: transverse pericardial sinus
alt_id: UBERON:FMA_77132-MA_0001880
def: "." [Wikipedia:Transverse_pericardial_sinus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Thiele's canal" EXACT []
synonym: "thiele's canal" EXACT []
synonym: "Transverse pericardial sinus" EXACT []
synonym: "Transverse sinus of pericardial cavity" EXACT []
synonym: "transverse sinus of pericardial cavity" EXACT []
xref: EHDAA:796 ! transverse pericardial sinus
xref: FMA:77132 ! Transverse pericardial sinus
xref: MA:0001880 ! transverse pericardial sinus
is_a: UBERON:0002553 ! anatomical cavity

[Term]
id: UBERON:0002249
name: median artery
alt_id: UBERON:FMA_77142-MA_0001999
comment: This class was created automatically from a combination of ontologies
synonym: "Median artery" EXACT []
xref: FMA:77142 ! Median artery
xref: MA:0001999 ! median artery
is_a: UBERON:0001637 ! artery
xref: ncithesaurus:Median_Artery ! Median Artery

[Term]
id: UBERON:0002250
name: popliteal artery
alt_id: UBERON:FMA_77155-MA_0002021
def: "." [Wikipedia:Popliteal_artery]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Popliteal artery" EXACT []
xref: FMA:77155 ! Popliteal artery
xref: GAID:504 ! popliteal artery
xref: MA:0002021 ! popliteal artery
xref: OpenCyc:Mx4rvduV6pwpEbGdrcN5Y29ycA
is_a: UBERON:0001637 ! artery
xref: ncithesaurus:Popliteal_Artery ! Popliteal Artery

[Term]
id: UBERON:0002251
name: iliocostalis
alt_id: UBERON:FMA_77177-MA_0002319
def: "." [Wikipedia:Iliocostalis]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Iliocostalis" EXACT []
xref: FMA:77177 ! Iliocostalis
xref: MA:0002319 ! iliocostalis
is_a: UBERON:0001630 ! muscle organ

[Term]
id: UBERON:0002252
name: splenius
alt_id: UBERON:FMA_77180-MA_0002382
def: "." [Wikipedia:Splenius]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Splenius" EXACT []
xref: FMA:77180 ! Splenius
xref: MA:0002382 ! splenius
is_a: UBERON:0001630 ! muscle organ
xref: ncithesaurus:Splenius ! Splenius

[Term]
id: UBERON:0002253
name: incisive bone
alt_id: UBERON:FMA_77231-MA_0001485
def: "." [Wikipedia:Incisive_bone]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Incisive bone" EXACT []
xref: FMA:77231 ! Incisive bone
xref: MA:0001485 ! incisive bone
is_a: UBERON:0000061 ! anatomical structure
relationship: part_of UBERON:0001704 ! viscerocranium

[Term]
id: UBERON:0002254
name: thyroglossal duct
alt_id: UBERON:FMA_77274-MA_0000130
def: "." [Wikipedia:Thyroglossal_duct]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Thyroglossal duct" EXACT []
xref: FMA:77274 ! Thyroglossal duct
xref: HOG:0000746 ! thyroglossal duct
xref: MA:0000130 ! thyroglossal duct
is_a: UBERON:0000058 ! duct
is_a: UBERON:0000479 ! portion of tissue
xref: ncithesaurus:Thyroglossal_Duct ! Thyroglossal Duct

[Term]
id: UBERON:0002255
name: vomeronasal organ
alt_id: UBERON:FMA_77280-MA_0000289
def: "." [Wikipedia:Vomeronasal_organ]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Jacobson's organ" EXACT []
synonym: "jacobson's organ" EXACT []
synonym: "organ of jacobsen" RELATED []
synonym: "Vomeronasal organ" EXACT []
xref: EHDAA:7865 ! vomeronasal organ
xref: FMA:77280 ! Vomeronasal organ
xref: GAID:354 ! vomeronasal organ
xref: HOG:0000665 ! vomeronasal organ
xref: MA:0000289 ! vomeronasal organ
is_a: UBERON:0000020 ! sense organ
relationship: part_of UBERON:0001016 ! nervous system
xref: BTO:0002608 ! vomeronasal organ

[Term]
id: UBERON:0002256
name: dorsal horn of spinal cord
alt_id: UBERON:FMA_77405-MA_0001119
comment: This class was created automatically from a combination of ontologies
synonym: "Dorsal grey column of spinal cord" EXACT []
synonym: "dorsal grey column of spinal cord" EXACT []
synonym: "Dorsal horn of spinal cord" EXACT []
synonym: "Posterior grey column of spinal cord" EXACT []
synonym: "posterior grey column of spinal cord" EXACT []
synonym: "spinal cord dorsal horn" EXACT []
xref: FMA:77405
xref: HOG:0001287 ! spinal cord dorsal horn
xref: MA:0001119 ! spinal cord dorsal horn
xref: NIF_GrossAnatomy:birnlex_2667 ! Spinal cord dorsal horn
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0002315 ! gray matter of spinal cord
xref: FMA:256530 ! Dorsal gray column of spinal cord

[Term]
id: UBERON:0002257
name: ventral horn of spinal cord
alt_id: UBERON:FMA_77431-MA_0001134
comment: This class was created automatically from a combination of ontologies
synonym: "Anterior grey column of spinal cord" EXACT []
synonym: "anterior grey column of spinal cord" EXACT []
synonym: "spinal cord ventral horn" EXACT []
synonym: "Ventral grey column of spinal cord" EXACT []
synonym: "ventral grey column of spinal cord" EXACT []
synonym: "Ventral horn of spinal cord" EXACT []
xref: FMA:77431
xref: HOG:0001288 ! spinal cord ventral horn
xref: MA:0001134 ! spinal cord ventral horn
xref: NIF_GrossAnatomy:birnlex_2668 ! Spinal cord ventral horn
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0002315 ! gray matter of spinal cord
xref: FMA:256541 ! Ventral gray column of spinal cord

[Term]
id: UBERON:0002258
name: dorsal funiculus
alt_id: UBERON:FMA_77461-ZFA_0000501
def: "." [Wikipedia:Dorsal_funiculus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Dorsal funiculus" EXACT []
synonym: "Dorsal funiculus of spinal cord" EXACT []
synonym: "dorsal funiculus of spinal cord" EXACT []
synonym: "Posterior funiculus of spinal cord" EXACT []
synonym: "posterior funiculus of spinal cord" EXACT []
xref: FMA:77461 ! Dorsal funiculus of spinal cord
xref: TAO:0000501 ! dorsal funiculus
xref: ZFA:0000501 ! dorsal funiculus
is_a: UBERON:0000122 ! nerve fiber bundle
relationship: part_of UBERON:0002240 ! spinal cord

[Term]
id: UBERON:0002259
name: tectal plate
alt_id: UBERON:FMA_77488-MA_0002567
def: "." [Wikipedia:Corpora_quadrigemina]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "corpora quadrigemina" EXACT []
synonym: "Quadrigeminal plate" EXACT []
synonym: "quadrigeminal plate" EXACT []
synonym: "Tectal plate" EXACT []
xref: FMA:77488 ! Tectal plate
xref: GAID:574 ! corpora quadrigemina
xref: MA:0002567 ! corpora quadrigemina
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0002314 ! midbrain tectum
xref: ncithesaurus:Corpora_Quadrigemina ! Corpora Quadrigemina
xref: BTO:0001710 ! corpora quadrigemina

[Term]
id: UBERON:0002260
name: ventral root
alt_id: UBERON:FMA_77516-ZFA_0000705
def: "The efferent motor root of a spinal nerve. At its distal end, the ventral root joins with the dorsal root to form a mixed spinal nerve." [Wikipedia:Ventral_root]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Ventral root" EXACT []
xref: FMA:77516 ! Ventral root
xref: NIF_GrossAnatomy:nlx_anat_20090209 ! Ventral root
xref: TAO:0000705 ! ventral root
xref: ZFA:0000705 ! ventral root
is_a: UBERON:0000061 ! anatomical structure
relationship: part_of UBERON:0002240 ! spinal cord

[Term]
id: UBERON:0002261
name: dorsal root
alt_id: UBERON:FMA_77517-ZFA_0000652
def: "." [Wikipedia:Dorsal_root]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Dorsal root" EXACT []
xref: FMA:77517 ! Dorsal root
xref: TAO:0000652 ! dorsal root
xref: ZFA:0000652 ! dorsal root
is_a: UBERON:0002211 ! segment of nerve
relationship: part_of UBERON:0002240 ! spinal cord

[Term]
id: UBERON:0002262
name: celiac ganglion
alt_id: UBERON:FMA_77570-MA_0001158
def: "." [Wikipedia:Celiac_ganglion]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Celiac ganglion" EXACT []
synonym: "Coeliac ganglion" EXACT []
synonym: "coeliac ganglion" RELATED []
xref: EHDAA:8946 ! coeliac ganglion
xref: FMA:77570 ! Celiac ganglion
xref: MA:0001158 ! celiac ganglion
is_a: UBERON:0001806 ! sympathetic ganglion
xref: ncithesaurus:Coeliac_Ganglion ! Celiac Ganglion

[Term]
id: UBERON:0002263
name: lentiform nucleus
alt_id: UBERON:FMA_77615-MA_0000896
def: "." [Wikipedia:Lentiform_nucleus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Lenticular nucleus" EXACT []
synonym: "lenticular nucleus" EXACT []
synonym: "Lentiform nucleus" EXACT []
xref: FMA:77615 ! Lentiform nucleus
xref: MA:0000896 ! lentiform nucleus
is_a: UBERON:0002308 ! nucleus of brain
xref: ncithesaurus:Lenticular_Nucleus ! Lenticular Nucleus

[Term]
id: UBERON:0002264
name: olfactory bulb
alt_id: UBERON:FMA_77624-MA_0000194-MIAA_0000116-ZFA_0000402
def: "Segment of neural tree organ which is continuous with a set of olfactory nerves and an olfactory tract." [Wikipedia:Olfactory_bulb]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "main olfactory bulb" RELATED []
synonym: "Olfactory bulb" EXACT []
xref: BTO:0000961
xref: FMA:77624 ! Olfactory bulb
xref: GAID:633 ! olfactory bulb
xref: HOG:0000033 ! olfactory bulb
xref: MA:0000194 ! olfactory bulb
xref: MIAA:0000116 ! olfactory lobe
xref: NIF_GrossAnatomy:birnlex_1137 ! Olfactory bulb
xref: TAO:0000402 ! olfactory bulb
xref: ZFA:0000402 ! olfactory bulb
is_a: UBERON:0000481 ! multi-tissue structure
relationship: part_of UBERON:0001893 ! telencephalon
xref: ncithesaurus:Olfactory_Bulb ! Olfactory Bulb

[Term]
id: UBERON:0002265
name: olfactory tract
alt_id: UBERON:FMA_77626-MA_0000975
def: "Tract of brain which is continuous with olfactory bulb and the cerebral cortex." [Wikipedia:Olfactory_tract]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Olfactory tract" EXACT []
xref: FMA:77626 ! Olfactory tract
xref: MA:0000975 ! olfactory tract
xref: NIF_GrossAnatomy:birnlex_1663 ! Olfactory tract
is_a: UBERON:0000073 ! regional part of nervous system
relationship: part_of UBERON:0001016 ! nervous system
xref: ncithesaurus:Olfactory_Tract ! Olfactory Tract
xref: BTO:0003647 ! olfactory tract

[Term]
id: UBERON:0002266
name: anterior olfactory nucleus
alt_id: UBERON:FMA_77628-MA_0000968
def: "." [Wikipedia:Anterior_olfactory_nucleus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Anterior olfactory nucleus" EXACT []
synonym: "Retrobulbar nucleus [A8]" EXACT []
synonym: "retrobulbar nucleus [a8]" EXACT []
xref: FMA:77628 ! Anterior olfactory nucleus
xref: MA:0000968 ! anterior olfactory nucleus
xref: NIF_GrossAnatomy:birnlex_1085 ! Anterior olfactory nucleus
is_a: UBERON:0002308 ! nucleus of brain
xref: ncithesaurus:Anterior_Olfactory_Nucleus ! Anterior Olfactory Nucleus
xref: BTO:0003649 ! anterior olfactory nucleus

[Term]
id: UBERON:0002267
name: laterodorsal tegmental nucleus
alt_id: UBERON:FMA_77654-MA_0001016
def: "." [Wikipedia:Laterodorsal_tegmental_nucleus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Laterodorsal tegmental nucleus" EXACT []
synonym: "Lateroposterior tegmental nucleus" EXACT []
synonym: "lateroposterior tegmental nucleus" EXACT []
xref: FMA:77654 ! Laterodorsal tegmental nucleus
xref: MA:0001016 ! laterodorsal tegmental nucleus
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0000988 ! pons
xref: BTO:0004016 ! laterodorsal tegmental nucleus

[Term]
id: UBERON:0002268
name: olfactory organ
alt_id: UBERON:FMA_77659-XAO_0000273
comment: This class was created automatically from a combination of ontologies
synonym: "Olfactory organ" EXACT []
xref: FMA:77659 ! Olfactory organ
xref: HOG:0000287 ! olfactory organ
xref: XAO:0000273 ! olfactory organ
is_a: UBERON:0000020 ! sense organ
relationship: develops_from UBERON:0003050 ! olfactory placode
relationship: part_of UBERON:0001016 ! nervous system
xref: BTO:0001772 ! olfactory organ

[Term]
id: UBERON:0002269
name: pupillary membrane
alt_id: UBERON:FMA_77663-MA_0001293
def: "Fetal membrane that crosses the pupil." [UBERON:cjm]
comment: This class was created automatically from a combination of ontologies
synonym: "Pupillary membrane" EXACT []
xref: FMA:77663 ! Pupillary membrane
xref: MA:0001293 ! pupillary membrane
is_a: UBERON:0002050 ! embryonic structure
relationship: part_of UBERON:0001771 ! pupil

[Term]
id: UBERON:0002270
name: hyaloid artery
alt_id: UBERON:FMA_77670-ZFA_0005045
def: "Artery that is internal to the eye. <a href='ZFIN_jump?record=ZDB-PUB-010205-5'>Isogai et al. 2001.</a>" [Wikipedia:Hyaloid_artery, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Hyaloid artery" EXACT []
xref: FMA:77670 ! Hyaloid artery
xref: TAO:0005045 ! hyaloid artery
xref: ZFA:0005045 ! hyaloid artery
is_a: UBERON:0001637 ! artery

[Term]
id: UBERON:0002271
name: periventricular zone of hypothalamus
alt_id: UBERON:FMA_77682-MA_0000846
comment: This class was created automatically from a combination of ontologies
synonym: "hypothalamus periventricular zone" EXACT []
synonym: "Periventricular zone of hypothalamus" EXACT []
xref: FMA:77682 ! Periventricular zone of hypothalamus
xref: HOG:0000623 ! hypothalamus periventricular zone
xref: MA:0000846 ! hypothalamus periventricular zone
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001898 ! hypothalamus

[Term]
id: UBERON:0002272
name: medial zone of hypothalamus
alt_id: UBERON:FMA_77683-MA_0000837
comment: This class was created automatically from a combination of ontologies
synonym: "hypothalamus medial zone" EXACT []
synonym: "Medial zone of hypothalamus" EXACT []
xref: FMA:77683 ! Medial zone of hypothalamus
xref: MA:0000837 ! hypothalamus medial zone
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001898 ! hypothalamus

[Term]
id: UBERON:0002273
name: lateral zone of hypothalamus
alt_id: UBERON:FMA_77684-MA_0000833
comment: This class was created automatically from a combination of ontologies
synonym: "hypothalamus lateral zone" EXACT []
synonym: "Lateral zone of hypothalamus" EXACT []
xref: FMA:77684 ! Lateral zone of hypothalamus
xref: MA:0000833 ! hypothalamus lateral zone
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001898 ! hypothalamus

[Term]
id: UBERON:0002274
name: perifornical nucleus
alt_id: UBERON:FMA_77688-MA_0000836
comment: This class was created automatically from a combination of ontologies
synonym: "Perifornical nucleus" EXACT []
xref: FMA:77688 ! Perifornical nucleus
xref: MA:0000836 ! perifornical nucleus
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0002273 ! lateral zone of hypothalamus

[Term]
id: UBERON:0002275
name: reticular formation
alt_id: UBERON:FMA_77719-ZFA_0000421
def: "." [Wikipedia:Reticular_formation]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Reticular formation" EXACT []
xref: FMA:77719 ! Reticular formation
xref: GAID:588 ! reticular formation
xref: TAO:0000421 ! reticular formation
xref: ZFA:0000421 ! reticular formation
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001896 ! medulla oblongata

[Term]
id: UBERON:0002276
name: lamina of spiral limbus
alt_id: UBERON:FMA_77721-MA_0001191
def: "." [Wikipedia:Limbus_laminae_spiralis]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Lamina of spiral limbus" EXACT []
synonym: "limbus lamina spiralis" EXACT []
synonym: "Limbus laminae spiralis" EXACT []
synonym: "limbus laminae spiralis" EXACT []
synonym: "Spiral limbus lamina" EXACT []
synonym: "spiral limbus lamina" EXACT []
xref: FMA:77721 ! Lamina of spiral limbus
xref: MA:0001191 ! limbus lamina spiralis
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001855 ! cochlear duct of membranous labyrinth

[Term]
id: UBERON:0002277
name: spiral sulcus
alt_id: UBERON:FMA_77744-MA_0001195
comment: This class was created automatically from a combination of ontologies
synonym: "Spiral sulcus" EXACT []
synonym: "Sulcus spiralis" EXACT []
synonym: "sulcus spiralis" EXACT []
xref: FMA:77744 ! Spiral sulcus
xref: MA:0001195 ! spiral sulcus
is_a: UBERON:0000093 ! sulcus
is_a: UBERON:0002553 ! anatomical cavity
relationship: part_of UBERON:0001855 ! cochlear duct of membranous labyrinth

[Term]
id: UBERON:0002278
name: perilymphatic space
alt_id: UBERON:FMA_77745-MA_0000248
comment: This class was created automatically from a combination of ontologies
synonym: "perilymphatic channel" EXACT []
synonym: "Perilymphatic space" EXACT []
xref: FMA:77745 ! Perilymphatic space
xref: MA:0000248 ! perilymphatic channel
is_a: UBERON:0002553 ! anatomical cavity
relationship: part_of UBERON:0001846 ! internal ear
xref: BTO:0002083 ! perilymphatic space

[Term]
id: UBERON:0002279
name: vestibular aqueduct
alt_id: UBERON:FMA_77821-MA_0001186
def: "." [Wikipedia:Vestibular_aqueduct]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Vestibular aqueduct" EXACT []
xref: FMA:77821 ! Vestibular aqueduct
xref: GAID:885 ! vestibular aqueduct
xref: MA:0001186 ! vestibular aqueduct
is_a: UBERON:0000464 ! anatomical space

[Term]
id: UBERON:0002280
name: otolith
alt_id: UBERON:FMA_77826-ZFA_0001617
def: "MERGED DEFINITION: TARGET DEFINITION: Portion of organism substance composed of calcium carbonate located in the otolith organ. -------------------- SOURCE DEFINITION: Brightly refractile stone-like organ within the otic vesicle and positioned over a sensory macula; two form in each vesicle during the late segmentation period. <a href='http://zfin.org/cgi-bin/ZFIN_jump?record=ZDB-PUB-961014-576'>Kimmel et al, 1995.</a> (Also see Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/oto/otolith.html'>otolith</a> by T. Whitfield.)" [Wikipedia:Otolith, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "immature otolith" RELATED []
synonym: "immature otoliths" RELATED []
synonym: "Otolith" EXACT []
xref: FMA:77826 ! Otolith
xref: TAO:0001621 ! otolith
xref: ZFA:0001617 ! otolith
is_a: UBERON:0000476 ! acellular anatomical structure
relationship: part_of UBERON:0001846 ! internal ear
xref: ncithesaurus:Otolith ! Otolith

[Term]
id: UBERON:0002281
name: vestibular membrane of cochlear duct
alt_id: UBERON:FMA_77829-MA_0001200
def: "a membrane inside the cochlea of the inner ear. It separates scala media from scala vestibuli. Together with the basilar membrane it creates a compartment in the cochlea filled with endolymph, which is important for the function of the organ of Corti. It primarily functions as a diffusion barrier, allowing nutrients to travel from the perilymph to the endolymph of the membranous labyrinth. Histologically, the membrane is composed of two layers of flattened epithelium, separated by a basal lamina. Its structure suggests that its function is transport of fluid and electrolytes." [Wikipedia:Reissner's_membrane]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Reissner's membrane" EXACT []
synonym: "reissner's membrane" RELATED []
synonym: "Superior wall of cochlear duct" EXACT []
synonym: "superior wall of cochlear duct" EXACT []
synonym: "vestibular membrane" EXACT []
synonym: "Vestibular membrane of cochlear duct" EXACT []
synonym: "Vestibular membrane of Reissner" EXACT []
synonym: "vestibular membrane of reissner" EXACT []
xref: FMA:77829 ! Vestibular membrane of cochlear duct
xref: MA:0001200 ! vestibular membrane
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001855 ! cochlear duct of membranous labyrinth

[Term]
id: UBERON:0002282
name: stria vascularis of cochlear duct
alt_id: UBERON:FMA_77832-MA_0001198
def: "." [Wikipedia:Stria_vascularis]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "stria vascularis" EXACT []
synonym: "Stria vascularis of cochlea" EXACT []
synonym: "stria vascularis of cochlea" EXACT []
synonym: "Stria vascularis of cochlear duct" EXACT []
xref: FMA:77832 ! Stria vascularis of cochlear duct
xref: GAID:875 ! stria vascularis
xref: MA:0001198 ! stria vascularis
xref: NIF_GrossAnatomy:birnlex_2525 ! Stria Vascularis
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001855 ! cochlear duct of membranous labyrinth
xref: BTO:0001819 ! stria vascularis

[Term]
id: UBERON:0002283
name: nail matrix
alt_id: UBERON:FMA_77856-MA_0002707
def: "." [Wikipedia:Nail_matrix]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Nail matrix" EXACT []
xref: FMA:77856 ! Nail matrix
xref: MA:0002707 ! nail matrix
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001705 ! nail

[Term]
id: UBERON:0002284
name: hyponychium
alt_id: UBERON:FMA_77860-MA_0002705
def: "." [Wikipedia:Hyponychium]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Hyponychium" EXACT []
xref: FMA:77860 ! Hyponychium
xref: MA:0002705 ! hyponychium
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001705 ! nail
relationship: part_of UBERON:0002097 ! skin

[Term]
id: UBERON:0002285
name: lateral ventricle
alt_id: UBERON:FMA_78448-MA_0000192
def: "The two lateral ventricles are a cavity in each of the cerebral hemispheres derived from the cavity of the embryonic neural tube. They are separated from each other by the septum pellucidum, and each communicates with the third ventricle by the foramen of Monro, through which also the choroid plexuses of the lateral ventricles become continuous with that of the third ventricle[GO]." [Wikipedia:Lateral_ventricle]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Lateral ventricle" EXACT []
xref: BTO:0000879
xref: EHDAA:3502 ! lateral ventricle
xref: EHDAA:6576 ! lateral ventricles
xref: FMA:78448 ! Lateral ventricle
xref: GAID:611 ! lateral ventricle
xref: MA:0000192 ! lateral ventricle
xref: NIF_GrossAnatomy:birnlex_1263 ! Lateral ventricle
xref: OpenCyc:Mx4rvYsFdZwpEbGdrcN5Y29ycA
xref: ZFA:0000696 ! telencephalic ventricle
is_a: UBERON:0002300 ! ventricle
relationship: part_of UBERON:0000955 ! brain
xref: ncithesaurus:Lateral_Ventricle ! Lateral Ventricle

[Term]
id: UBERON:0002286
name: third ventricle
alt_id: UBERON:FMA_78454-MA_0000182-ZFA_0000161
def: "Fluid-filled brain cavity. <a href='http://zfin.org/cgi-bin/ZFIN_jump?record=ZDB-PUB-961014-576'>Kimmel et al, 1995.</a>" [Wikipedia:Third_ventricle, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "3rd ventricle" RELATED []
synonym: "diencephalic ventricle" RELATED []
synonym: "diencephalic vesicle" RELATED []
synonym: "Third ventricle" EXACT []
xref: FMA:78454 ! Third ventricle
xref: GAID:614 ! third ventricle
xref: HOG:0000007 ! third ventricle
xref: MA:0000182 ! third ventricle
xref: NIF_GrossAnatomy:birnlex_1658
xref: NIF_GrossAnatomy:birnlex_714 ! Third ventricle
xref: OpenCyc:Mx4rvakhcJwpEbGdrcN5Y29ycA
xref: TAO:0000161 ! third ventricle
xref: ZFA:0000161 ! third ventricle
is_a: UBERON:0002300 ! ventricle
relationship: part_of UBERON:0001894 ! diencephalon
xref: ncithesaurus:Third_Ventricle_of_Brain ! Third Ventricle

[Term]
id: UBERON:0002287
name: optic recess of third ventricle
alt_id: UBERON:FMA_78455-ZFA_0000049
def: "." [Wikipedia:Optic_recess]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Optic recess" EXACT []
synonym: "optic recess" EXACT []
synonym: "Optic recess of third ventricle" EXACT []
synonym: "Preoptic recess" EXACT []
synonym: "preoptic recess" EXACT []
synonym: "Supraoptic recess" EXACT []
synonym: "supraoptic recess" EXACT []
xref: EHDAA:1343 ! optic recess
xref: EHDAA:1973 ! optic recess
xref: EHDAA:2649 ! optic recess
xref: EHDAA:3478 ! optic recess
xref: FMA:78455 ! Optic recess of third ventricle
xref: HOG:0000595 ! optic recess
xref: TAO:0000049 ! optic recess
xref: ZFA:0000049 ! optic recess
is_a: UBERON:0002553 ! anatomical cavity
relationship: part_of UBERON:0001893 ! telencephalon

[Term]
id: UBERON:0002288
name: choroid plexus of third ventricle
alt_id: UBERON:FMA_78462-MA_0000879
comment: This class was created automatically from a combination of ontologies
synonym: "3rd ventricle choroid plexus" RELATED []
synonym: "Chorioid plexus of third ventricle" EXACT []
synonym: "chorioid plexus of third ventricle" EXACT []
synonym: "Choroid plexus of third ventricle" EXACT []
synonym: "third ventricle choroid plexus" EXACT []
xref: FMA:78462 ! Choroid plexus of third ventricle
xref: MA:0000879 ! third ventricle choroid plexus
xref: ZFA:0001444 ! choroid plexus third ventricle
is_a: UBERON:0001886 ! choroid plexus of cerebral hemisphere
intersection_of: UBERON:0001886 ! choroid plexus of cerebral hemisphere
intersection_of: part_of UBERON:0002286 ! third ventricle
relationship: part_of UBERON:0002286 ! third ventricle

[Term]
id: UBERON:0002289
name: cerebral aqueduct
alt_id: UBERON:FMA_78467-MA_0000208
def: "." [Wikipedia:Cerebral_aqueduct]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Aqueduct (Sylvius)" EXACT []
synonym: "aqueduct (sylvius)" EXACT []
synonym: "Aqueduct of midbrain" EXACT []
synonym: "aqueduct of midbrain" EXACT []
synonym: "Aqueduct of Sylvius" EXACT []
synonym: "aqueduct of sylvius" EXACT []
synonym: "Cerebral aqueduct" EXACT []
synonym: "Cerebral aqueduct of Sylvius" EXACT []
synonym: "cerebral aqueduct of sylvius" EXACT []
xref: EHDAA:3696 ! cerebral aqueduct
xref: FMA:78467 ! Cerebral aqueduct
xref: GAID:583 ! cerebral aqueduct
xref: HOG:0000832 ! cerebral aqueduct
xref: MA:0000208 ! cerebral aqueduct
xref: NIF_GrossAnatomy:birnlex_1261 ! Cerebral aqueduct
is_a: UBERON:0002553 ! anatomical cavity
relationship: part_of UBERON:0001891 ! midbrain
xref: ncithesaurus:Aqueduct_of_Sylvius ! Aqueduct of Sylvius

[Term]
id: UBERON:0002290
name: choroid plexus of fourth ventricle
alt_id: UBERON:FMA_78492-MA_0000983
comment: This class was created automatically from a combination of ontologies
synonym: "4th ventricle choroid plexus" RELATED []
synonym: "Chorioid plexus of fourth ventricle" EXACT []
synonym: "chorioid plexus of fourth ventricle" EXACT []
synonym: "Choroid plexus of fourth ventricle" EXACT []
synonym: "fourth ventricle choroid plexus" EXACT []
xref: FMA:78492 ! Choroid plexus of fourth ventricle
xref: MA:0000983 ! fourth ventricle choroid plexus
xref: ZFA:0001446 ! choroid plexus fourth ventricle
is_a: UBERON:0001886 ! choroid plexus of cerebral hemisphere
intersection_of: UBERON:0001886 ! choroid plexus of cerebral hemisphere
intersection_of: part_of UBERON:0002422 ! fourth ventricle
relationship: part_of UBERON:0002037 ! cerebellum

[Term]
id: UBERON:0002291
name: central canal
alt_id: UBERON:0002220
alt_id: UBERON:FMA_75364-MA_0001117
alt_id: UBERON:FMA_78497-ZFA_0000938
def: "A cerebrospinal fluid-filled space that runs longitudinally through the length of the entire spinal cord. The central canal is contiguous with the ventricular system of the brain. The central canal represents the adult remainder of the neural tube." [Wikipedia:Central_canal]
comment: previously mapped to FMA:75364
subset: uberon_slim
synonym: "Central canal" EXACT []
synonym: "central canal of spinal cord" EXACT []
synonym: "neural lumen" RELATED []
synonym: "spinal cord central canal" EXACT []
xref: FMA:78497 ! Central canal of spinal cord
xref: MA:0001117 ! spinal cord central canal
xref: NIF_GrossAnatomy:birnlex_1409
xref: TAO:0000938 ! central canal
xref: ZFA:0000938 ! central canal
is_a: UBERON:0002553 ! anatomical cavity
relationship: contains UBERON:0001359 ! cerebrospinal fluid
relationship: surrounded_by UBERON:0002240 ! spinal cord
relationship: develops_from UBERON:0001049
xref: ncithesaurus:Central_Canal ! Central Canal of Spinal Cord

[Term]
id: UBERON:0002292
name: joint of head of rib
alt_id: UBERON:FMA_7951-MA_0001510
def: "." [Wikipedia:Costovertebral_joint]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Costal head joint" EXACT []
synonym: "costal head joint" EXACT []
synonym: "Costocorporeal joint" EXACT []
synonym: "costocorporeal joint" EXACT []
synonym: "Costovertebral joint" EXACT []
synonym: "costovertebral joint" EXACT []
synonym: "Joint of costal head" EXACT []
synonym: "joint of costal head" EXACT []
synonym: "Joint of head of rib" EXACT []
xref: FMA:7951 ! Joint of head of rib
xref: MA:0001510 ! costovertebral joint
is_a: UBERON:0002001 ! joint of rib
is_a: UBERON:0002217 ! synovial joint
intersection_of: UBERON:0000982 ! joint
intersection_of: part_of UBERON:0002230 ! head of rib
xref: ncithesaurus:Costovertebral_Joint ! Costovertebral Joint

[Term]
id: UBERON:0002293
name: costochondral joint
alt_id: UBERON:FMA_7956-MA_0001509
def: "." [Wikipedia:Costochondral_joint]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Articulatio costochondralis" EXACT []
synonym: "articulatio costochondralis" EXACT []
synonym: "Chondrocostal synchondrosis" EXACT []
synonym: "chondrocostal synchondrosis" EXACT []
synonym: "Costochondral joint" EXACT []
synonym: "Costochondral junction" EXACT []
synonym: "costochondral junction" EXACT []
synonym: "Costochondral synchondrosis" EXACT []
synonym: "costochondral synchondrosis" EXACT []
xref: FMA:7956 ! Costochondral joint
xref: MA:0001509 ! costochondral joint
xref: OpenCyc:Mx4rvfy27JwpEbGdrcN5Y29ycA
is_a: UBERON:0002001 ! joint of rib
is_a: UBERON:0002215 ! synchondrosis
xref: ncithesaurus:Costochondral_Joint ! Costochondral Joint

[Term]
id: UBERON:0002294
name: biliary system
alt_id: UBERON:FMA_79646-MA_0001273
def: "Anatomical system that consists of the organs and ducts (bile ducts, gallbladder, and associated structures) that are involved in the production and transportation of bile." [Wikipedia:Biliary_system]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Biliary apparatus" EXACT []
synonym: "biliary apparatus" EXACT []
synonym: "Biliary system" EXACT []
synonym: "Biliary tract" EXACT []
synonym: "biliary tract" EXACT []
xref: FMA:79646 ! Biliary system
xref: GAID:279 ! biliary tract
xref: MA:0001273 ! biliary tract
is_a: UBERON:0000467 ! anatomical system
disjoint_from: UBERON:0000075 ! subdivision of skeleton
disjoint_from: UBERON:0000949 ! endocrine system
disjoint_from: UBERON:0000990 ! reproductive system
disjoint_from: UBERON:0001004 ! respiratory system
disjoint_from: UBERON:0001007 ! digestive system
disjoint_from: UBERON:0001008 ! urinary system
disjoint_from: UBERON:0001009 ! circulatory system
disjoint_from: UBERON:0001016 ! nervous system
disjoint_from: UBERON:0001032 ! sense organ system
disjoint_from: UBERON:0001033 ! gustatory system
disjoint_from: UBERON:0001434 ! skeleton
disjoint_from: UBERON:0002204 ! musculoskeletal system
disjoint_from: UBERON:0002330 ! exocrine system
disjoint_from: UBERON:0002390 ! hematopoietic system
disjoint_from: UBERON:0002405 ! immune system
disjoint_from: UBERON:0002416 ! integumental system
disjoint_from: UBERON:0002423 ! hepatobiliary system
relationship: part_of UBERON:0002423 ! hepatobiliary system
xref: ncithesaurus:Biliary_Tract ! Biliary Tract

[Term]
id: UBERON:0002295
name: scala media
alt_id: UBERON:FMA_79789-MA_0002458
def: "." [Wikipedia:Scala_media]
comment: This class was created automatically from a combination of ontologies. TODO: check w wikipedia, cochlear duct
subset: uberon_slim
synonym: "cochlear duct" RELATED []
synonym: "Scala media" EXACT []
xref: FMA:79789 ! Scala media
xref: MA:0002458 ! scala media
is_a: UBERON:0000477 ! anatomical cluster
relationship: part_of UBERON:0001844 ! cochlea

[Term]
id: UBERON:0002296
name: dorsal mesentery
alt_id: UBERON:FMA_79795-ZFA_0005130
def: "The mesentery that originates from the dorsal side of the peritoneal cavity." [Wikipedia:Dorsal_mesentery, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Dorsal mesentery" EXACT []
xref: EHDAA:3019 ! dorsal mesentery
xref: EHDAA:3033 ! dorsal mesentery
xref: EHDAA:3921 ! dorsal mesentery
xref: EHDAA:3934 ! dorsal mesentery
xref: EHDAA:3957 ! dorsal mesentery
xref: EHDAA:3971 ! dorsal mesentery
xref: FMA:79795 ! Dorsal mesentery
xref: TAO:0005130 ! dorsal mesentery
xref: ZFA:0005130 ! dorsal mesentery
is_a: UBERON:0002050 ! embryonic structure
is_a: UBERON:0002095 ! mesentery

[Term]
id: UBERON:0002297
name: cerumen
alt_id: UBERON:FMA_79869-MA_0002506
def: "." [Wikipedia:Cerumen]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Cerumen" EXACT []
synonym: "Ear wax" EXACT []
synonym: "ear wax" EXACT []
xref: ENVO:02000028
xref: FMA:79869 ! Cerumen
xref: GAID:1158 ! cerumen
xref: MA:0002506 ! cerumen
is_a: UBERON:0000463 ! portion of organism substance
xref: ncithesaurus:Cerumen ! Cerumen

[Term]
id: UBERON:0002298
name: brainstem
alt_id: UBERON:FMA_79876-MA_0000169
def: "." [Wikipedia:Brainstem]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "brain stem" RELATED []
synonym: "Brainstem" EXACT []
xref: FMA:79876 ! Brainstem
xref: HOG:0001457 ! brainstem
xref: MA:0000169 ! brainstem
xref: NIF_GrossAnatomy:birnlex_1565 ! Brainstem
is_a: UBERON:0002616 ! regional part of brain
relationship: part_of UBERON:0000955 ! brain

[Term]
id: UBERON:0002299
name: alveolus of lung
alt_id: UBERON:FMA_82493-MA_0000420
def: "Spherical outcropping of the respiratory bronchioles and primary site of gas exchange with the blood. Alveoli are particular to mammalian lungs. Different structures are involved in gas exchange in other vertebrates[WP]." [Wikipedia:Pulmonary_alveolus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "alveolus" RELATED []
synonym: "lung alveolus" EXACT []
synonym: "pulmonary alveolus" RELATED []
xref: BTO:0000060
xref: HOG:0001445 ! lung alveolus
xref: MA:0000420 ! lung alveolus
is_a: UBERON:0003215 ! alveolus
intersection_of: UBERON:0003215 ! alveolus
intersection_of: part_of UBERON:0002048 ! lung
relationship: part_of UBERON:0002048 ! lung

[Term]
id: UBERON:0002300
name: ventricle
alt_id: UBERON:FMA_82553-MA_0000818
def: "A chamber of an organ with cavitated organ parts. Examples: right ventricle of heart, lateral ventricle of brain." [Wikipedia:Ventricle]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "brain ventricle" EXACT []
synonym: "Ventricle" EXACT []
xref: EFO:0000317 ! ventricle
xref: EHDAA:1912 ! ventricle
xref: FMA:82553 ! Ventricle
xref: MA:0000818 ! brain ventricle
xref: MAT:0000497 ! ventricle
xref: ncithesaurus:Ventricle_Brain
is_a: UBERON:0002553 ! anatomical cavity
relationship: part_of UBERON:0001016 ! nervous system
xref: BTO:0001442 ! brain ventricle

[Term]
id: UBERON:0002301
name: layer of neocortex
alt_id: UBERON:FMA_83138-MA_0000186
comment: This class was created automatically from a combination of ontologies
synonym: "cerebral cortex layer" RELATED []
synonym: "Layer of neocortex" EXACT []
synonym: "Neocortex layer" EXACT []
synonym: "neocortex layer" EXACT []
xref: FMA:83138 ! Layer of neocortex
xref: MA:0000186 ! neocortex layer
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001950 ! neocortex

[Term]
id: UBERON:0002302
name: myocardium of atrium
alt_id: UBERON:FMA_83509-MA_0000081-ZFA_0001374
comment: This class was created automatically from a combination of ontologies
synonym: "Atrial myocardium" EXACT []
synonym: "atrial myocardium" EXACT []
synonym: "atrium myocardium" EXACT []
synonym: "Myocardium of atrium" EXACT []
xref: FMA:83509 ! Myocardium of atrium
xref: HOG:0000602 ! atrium myocardium
xref: MA:0000081 ! atrium myocardium
xref: TAO:0001374 ! atrial myocardium
xref: ZFA:0001374 ! atrial myocardium
is_a: UBERON:0002349 ! myocardium
intersection_of: UBERON:0002349 ! myocardium
intersection_of: part_of UBERON:0002081 ! cardiac atrium
relationship: part_of UBERON:0002081 ! cardiac atrium
relationship: part_of UBERON:0002349 ! myocardium

[Term]
id: UBERON:0002303
name: juxtaglomerular complex
alt_id: UBERON:FMA_83599-MA_0002546
def: "." [Wikipedia:Juxtaglomerular_apparatus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Juxtaglomerular apparatus" EXACT []
synonym: "juxtaglomerular apparatus" RELATED []
synonym: "Juxtaglomerular complex" EXACT []
xref: FMA:83599 ! Juxtaglomerular complex
xref: GAID:432 ! juxtaglomerular apparatus
xref: MA:0002546 ! juxtaglomerular complex
is_a: UBERON:0000477 ! anatomical cluster
relationship: part_of UBERON:0001225 ! cortex of kidney
xref: ncithesaurus:Juxtaglomerular_Apparatus ! Juxtaglomerular Apparatus

[Term]
id: UBERON:0002304
name: layer of dentate gyrus
alt_id: UBERON:FMA_83678-MA_0002429
comment: This class was created automatically from a combination of ontologies
synonym: "Dentate gyrus layer" EXACT []
synonym: "dentate gyrus layer" EXACT []
synonym: "Layer of dentate gyrus" EXACT []
xref: FMA:83678 ! Layer of dentate gyrus
xref: MA:0002429 ! dentate gyrus layer
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001885 ! dentate gyrus of hippocampal formation

[Term]
id: UBERON:0002305
name: layer of hippocampus
alt_id: UBERON:FMA_83679-MA_0002427
comment: This class was created automatically from a combination of ontologies
synonym: "Hippocampus layer" EXACT []
synonym: "hippocampus layer" EXACT []
synonym: "Layer of hippocampus" EXACT []
xref: FMA:83679 ! Layer of hippocampus
xref: MA:0002427 ! hippocampus layer
is_a: UBERON:0000064 ! organ part
intersection_of: UBERON:0000119 ! cell layer
intersection_of: part_of UBERON:0001954 ! hippocampus
relationship: part_of UBERON:0001954 ! hippocampus

[Term]
id: UBERON:0002306
name: nasal mucus
alt_id: UBERON:FMA_83688-MA_0002535
def: "." [Wikipedia:Nasal_mucus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Nasal mucus" EXACT []
xref: FMA:83688 ! Nasal mucus
xref: MA:0002535 ! nasal mucus
is_a: UBERON:0000463 ! portion of organism substance
xref: ncithesaurus:Nasal_Mucus ! Nasal Mucus

[Term]
id: UBERON:0002307
name: choroid plexus of lateral ventricle
alt_id: UBERON:FMA_83711-MA_0000961
comment: This class was created automatically from a combination of ontologies
synonym: "Chorioid plexus of lateral ventricle" EXACT []
synonym: "chorioid plexus of lateral ventricle" EXACT []
synonym: "Choroid plexus of lateral ventricle" EXACT []
synonym: "lateral ventricle choroid plexus" EXACT []
xref: FMA:83711 ! Choroid plexus of lateral ventricle
xref: MA:0000961 ! lateral ventricle choroid plexus
xref: ZFA:0001447 ! choroid plexus telencephalic ventricle
is_a: UBERON:0001886 ! choroid plexus of cerebral hemisphere
intersection_of: UBERON:0001886 ! choroid plexus of cerebral hemisphere
intersection_of: part_of UBERON:0002285 ! lateral ventricle
relationship: part_of UBERON:0002285 ! lateral ventricle

[Term]
id: UBERON:0002308
name: nucleus of brain
alt_id: UBERON:FMA_83840-MA_0000811
def: "Nucleus of neuraxis which is located within the brain. Example: pontobulbar nucleus, globose nucleus[FMA]. brain structure consisting of a relatively compact cluster of neurons. It is one of the two most common forms of nerve cell organization, the other being layered structures such as the cerebral cortex or cerebellar cortex. In anatomical sections, a nucleus shows up as a region of gray matter, often bordered by white matter. The vertebrate brain contains hundreds of distinguishable nuclei, varying widely in shape and size. A nucleus may itself have a complex internal structure, with multiple types of neurons arranged in clumps (subnuclei) or layers.[Wikipedia]" [FMA:83840, Wikipedia:Nucleus_(neuroanatomy)]
comment: This class was created automatically from a combination of ontologies
synonym: "Brain nucleus" EXACT []
synonym: "brain nucleus" EXACT []
synonym: "Nucleus of brain" EXACT []
xref: FMA:83840 ! Nucleus of brain
xref: MA:0000811 ! brain nucleus
is_a: UBERON:0000125 ! neural nucleus
relationship: part_of UBERON:0002020 ! gray matter of neuraxis
xref: ncithesaurus:Brain_Nucleus ! Brain Nucleus

[Term]
id: UBERON:0002309
name: medial longitudinal fasciculus
alt_id: UBERON:FMA_83846-ZFA_0000543
def: "." [Wikipedia:Medial_longitudinal_fasciculus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Medial longitudinal fasciculus" EXACT []
xref: FMA:83846 ! Medial longitudinal fasciculus
xref: TAO:0000543 ! medial longitudinal fasciculus
xref: ZFA:0000543 ! medial longitudinal fasciculus
is_a: UBERON:0000481 ! multi-tissue structure
relationship: part_of UBERON:0001016 ! nervous system
xref: BTO:0003951 ! medial longitudinal fasciculus

[Term]
id: UBERON:0002310
name: fimbria of hippocampus
alt_id: UBERON:FMA_83866-MA_0000949
comment: This class was created automatically from a combination of ontologies
synonym: "fimbria hippocampus" EXACT []
synonym: "Fimbria of hippocampus" EXACT []
synonym: "Neuraxis fimbria" EXACT []
synonym: "neuraxis fimbria" EXACT []
xref: FMA:83866 ! Fimbria of hippocampus
xref: MA:0000949 ! fimbria hippocampus
xref: NIF_GrossAnatomy:birnlex_1502 ! Fimbria of hippocampus
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001954 ! hippocampus

[Term]
id: UBERON:0002311
name: nodulus of cerebellum
alt_id: UBERON:FMA_83882-MA_0001007
comment: This class was created automatically from a combination of ontologies
synonym: "cerebellum lobule X" EXACT []
synonym: "cerebellum lobule x" EXACT []
synonym: "Neuraxis nodulus" EXACT []
synonym: "neuraxis nodulus" EXACT []
synonym: "nodulus" RELATED []
synonym: "Nodulus of cerebellum" EXACT []
xref: FMA:83882 ! Nodulus of cerebellum
xref: MA:0001007 ! cerebellum lobule X
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001016 ! nervous system

[Term]
id: UBERON:0002312
name: pyramis of vermis of cerebellum
alt_id: UBERON:FMA_83888-MA_0001005
comment: This class was created automatically from a combination of ontologies
synonym: "cerebellum lobule VIII" EXACT []
synonym: "cerebellum lobule viii" EXACT []
synonym: "Neuraxis pyramis" EXACT []
synonym: "neuraxis pyramis" EXACT []
synonym: "Pyramis of vermis of cerebellum" EXACT []
synonym: "pyramus" RELATED []
xref: FMA:83888 ! Pyramis of vermis of cerebellum
xref: MA:0001005 ! cerebellum lobule VIII
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0002037 ! cerebellum

[Term]
id: UBERON:0002313
name: pyramidal layer of hippocampus
alt_id: UBERON:FMA_83895-MA_0000956
comment: This class was created automatically from a combination of ontologies
synonym: "hippocampus pyramidal layer" EXACT []
synonym: "hippocampus stratum pyramidale" RELATED []
synonym: "Pyramidal layer of hippocampus" EXACT []
xref: FMA:83895 ! Pyramidal layer of hippocampus
xref: MA:0000956 ! hippocampus pyramidal layer
is_a: UBERON:0002305 ! layer of hippocampus

[Term]
id: UBERON:0002314
name: midbrain tectum
alt_id: UBERON:FMA_83902-MA_0000211
def: "." [Wikipedia:Midbrain_tectum]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Midbrain tectum" EXACT []
synonym: "Neuraxis tectum" EXACT []
synonym: "neuraxis tectum" EXACT []
synonym: "tectum" EXACT []
xref: EFO:0000920 ! tectum
xref: FMA:83902 ! Midbrain tectum
xref: MA:0000211 ! tectum
xref: MAT:0000451 ! tectum
xref: NIF_GrossAnatomy:birnlex_1032 ! Midbrain tectum
is_a: UBERON:0002950 ! regional part of midbrain
relationship: part_of UBERON:0001891 ! midbrain

[Term]
id: UBERON:0002315
name: gray matter of spinal cord
alt_id: UBERON:FMA_83926-MA_0000002
comment: This class was created automatically from a combination of ontologies
synonym: "Gray matter of spinal cord" EXACT []
synonym: "Grey matter of spinal cord" EXACT []
synonym: "grey matter of spinal cord" EXACT []
synonym: "Grey substance of spinal cord" EXACT []
synonym: "grey substance of spinal cord" EXACT []
synonym: "spinal cord grey matter" EXACT []
xref: FMA:83926 ! Segment of gray matter of spinal cord
xref: MA:0000002 ! spinal cord grey matter
is_a: UBERON:0002020 ! gray matter of neuraxis
intersection_of: UBERON:0002020 ! gray matter of neuraxis
intersection_of: part_of UBERON:0002240 ! spinal cord
relationship: part_of UBERON:0002240 ! spinal cord

[Term]
id: UBERON:0002316
name: white matter of neuraxis
alt_id: UBERON:FMA_83929-MA_0001135
def: "Heterogeneous cluster of neurites in the brain and the spinal cord." [Wikipedia:White_matter]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "White matter" EXACT []
synonym: "white matter" EXACT []
synonym: "White matter of neuraxis" EXACT []
synonym: "White substance" EXACT []
synonym: "white substance" EXACT []
xref: FMA:83929 ! White matter of neuraxis
xref: MA:0001135 ! white matter
is_a: UBERON:0000477 ! anatomical cluster
relationship: part_of UBERON:0001017 ! central nervous system
xref: ZFA:0001682 ! white matter
xref: ncithesaurus:White_Matter ! White Matter

[Term]
id: UBERON:0002317
name: white matter of cerebellum
alt_id: UBERON:FMA_83943-MA_0002430
comment: This class was created automatically from a combination of ontologies
synonym: "cerebellum white matter" EXACT []
synonym: "White matter of cerebellum" EXACT []
xref: FMA:83943 ! White matter of cerebellum
xref: MA:0002430 ! cerebellum white matter
is_a: UBERON:0002316 ! white matter of neuraxis
intersection_of: UBERON:0002316 ! white matter of neuraxis
intersection_of: part_of UBERON:0002037 ! cerebellum
relationship: part_of UBERON:0002037 ! cerebellum
xref: ncithesaurus:Cerebellum_White_Matter ! Cerebellum White Matter

[Term]
id: UBERON:0002318
name: white matter of spinal cord
alt_id: UBERON:FMA_83945-MA_0000910
comment: This class was created automatically from a combination of ontologies
synonym: "spinal cord white matter" EXACT []
synonym: "White matter of spinal cord" EXACT []
xref: FMA:83945 ! White matter of spinal cord
xref: MA:0000910 ! spinal cord white matter
is_a: UBERON:0002316 ! white matter of neuraxis
intersection_of: UBERON:0002316 ! white matter of neuraxis
intersection_of: part_of UBERON:0002240 ! spinal cord
relationship: part_of UBERON:0002240 ! spinal cord

[Term]
id: UBERON:0002319
name: mesangium
alt_id: UBERON:FMA_84139-MA_0002617
def: "." [Wikipedia:Mesangium]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Mesangium" EXACT []
xref: FMA:84139 ! Mesangium
xref: MA:0002617 ! mesangium
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0002113 ! kidney
xref: ncithesaurus:Mesangium ! Mesangium
xref: BTO:0002494 ! mesangium

[Term]
id: UBERON:0002320
name: glomerular mesangium
alt_id: UBERON:FMA_84140-MA_0002606
def: "." [Wikipedia:Glomerular_mesangium]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Glomerular mesangium" EXACT []
xref: FMA:84140 ! Glomerular mesangium
xref: GAID:430 ! glomerular mesangium
xref: MA:0002606 ! glomerular mesangium
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0002319 ! mesangium

[Term]
id: UBERON:0002321
name: extraglomerular mesangium
alt_id: UBERON:FMA_84141-MA_0002602
comment: This class was created automatically from a combination of ontologies
synonym: "Extraglomerular mesangium" EXACT []
xref: FMA:84141 ! Extraglomerular mesangium
xref: MA:0002602 ! extraglomerular mesangium
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001229 ! renal corpuscle
relationship: part_of UBERON:0002303 ! juxtaglomerular complex
relationship: part_of UBERON:0002319 ! mesangium

[Term]
id: UBERON:0002322
name: periventricular nucleus
alt_id: UBERON:FMA_84354-ZFA_0000260
def: "." [Wikipedia:Periventricular_nucleus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Periventricular nucleus" EXACT []
xref: FMA:84354 ! Periventricular nucleus
xref: TAO:0000260 ! periventricular nucleus
xref: ZFA:0000260 ! periventricular nucleus
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0002324
name: muscle of back
alt_id: UBERON:FMA_85216-MA_0000496
comment: This class was created automatically from a combination of ontologies
synonym: "Back muscle" EXACT []
synonym: "back muscle" EXACT []
synonym: "Muscle of back" EXACT []
xref: FMA:85216 ! Muscle of back
xref: MA:0000496 ! back muscle
is_a: UBERON:0001774 ! muscle of trunk
intersection_of: UBERON:0001630 ! muscle organ
intersection_of: part_of UBERON:0001137 ! back
relationship: part_of UBERON:0001137 ! back

[Term]
id: UBERON:0002325
name: epithelium of urethra
alt_id: UBERON:FMA_85275-MA_0001686
comment: This class was created automatically from a combination of ontologies
synonym: "Epithelium of urethra" EXACT []
synonym: "urethra epithelium" EXACT []
synonym: "Urethral epithelium" EXACT []
synonym: "urethral epithelium" RELATED []
xref: FMA:85275 ! Epithelium of urethra
xref: MA:0001686 ! urethra epithelium
is_a: UBERON:0000483 ! epithelium
intersection_of: UBERON:0000483 ! epithelium
intersection_of: part_of UBERON:0000057 ! urethra
xref: ncithesaurus:Urethra_Epithelium ! Urethra Epithelium

[Term]
id: UBERON:0002326
name: lamina propria of urethra
alt_id: UBERON:FMA_85276-MA_0001689
comment: This class was created automatically from a combination of ontologies
synonym: "Lamina propria of urethra" EXACT []
synonym: "urethra lamina propria" EXACT []
synonym: "urethral lamina propria" RELATED []
xref: FMA:85276 ! Lamina propria of urethra
xref: MA:0001689 ! urethra lamina propria
is_a: UBERON:0000030 ! lamina propria
intersection_of: UBERON:0000030 ! lamina propria
intersection_of: part_of UBERON:0000057 ! urethra
relationship: part_of UBERON:0001008 ! urinary system

[Term]
id: UBERON:0002327
name: trunk of intercostal nerve
alt_id: UBERON:FMA_85315-MA_0001176
comment: This class was created automatically from a combination of ontologies
synonym: "intercostal nerve trunk" EXACT []
synonym: "Intercostal neural trunk" EXACT []
synonym: "intercostal neural trunk" EXACT []
synonym: "Trunk of intercostal nerve" EXACT []
xref: FMA:85315 ! Trunk of intercostal nerve
xref: MA:0001176 ! intercostal nerve trunk
is_a: UBERON:0001147 ! trunk of peripheral nerve

[Term]
id: UBERON:0002328
name: notochord
alt_id: UBERON:FMA_85521-XAO_0000055-ZFA_0000135
def: "A longitudinal flexible rod of cells that in the embryo forms the supporting axis of the body. It degenerates, beginning anteriorly, at NF stage 46. Its posterior portion is greatly reduced by NF stage 55 and the entire structure is gone by NF stage 65. // Rod-like principal supportive element of the embryo and larva, present in the midline just ventral to the neural tube, and differentiating during the segmentation period to form large vacuolated epithelial cells and a surrounding a sheath of fibrous and elastic layers. Layering of the sheath may differ in structure, thickness and development among groups; in cypriniforms there are actually three very thin layers to the sheath. A functional, well developed notochord is present throughout life in certain basal fish groups but not in cypriniforms. <a href='http://zfin.org/cgi-bin/ZFIN_jump?record=ZDB-PUB-961014-576'>Kimmel et al, 1995.</a>" [ISBN:0815318960, NLM:notochord, Wikipedia:Notochord, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Chordamesoderm" EXACT []
synonym: "chordamesoderm" EXACT []
synonym: "Notochord" EXACT []
synonym: "notocord" RELATED []
xref: AAO:0000327 ! notochord
xref: EHDAA:1241 ! notochord
xref: EHDAA:6021 ! notochord
xref: FMA:85521 ! Notochord
xref: GAID:1311 ! notochord
xref: HOG:0000199 ! notochord
xref: MAT:0000281 ! notochord
xref: TAO:0000135 ! notochord
xref: XAO:0000055 ! notochord
xref: ZFA:0000135 ! notochord
is_a: UBERON:0000479 ! portion of tissue
is_a: UBERON:0002050 ! embryonic structure
relationship: develops_from UBERON:0003068 ! axial mesoderm
relationship: part_of UBERON:0000922 ! embryo
relationship: part_of UBERON:0002021 ! occipital lobe
relationship: part_of UBERON:0002543 ! median fin skeleton
xref: ncithesaurus:Notochord ! Notochord
xref: BTO:0001768 ! notochord

[Term]
id: UBERON:0002329
name: somite
alt_id: UBERON:FMA_85522-MIAA_0000068-XAO_0000058-ZFA_0000155
def: "Portion of mesoderm distributed along the two sides of the neural tube and that will eventually become dermis (dermatome), skeletal muscle (myotome), and vertebrae (sclerotome)[WP]. In Zebrafish: Any of the approximately 45 bilaterally paired blocks of mesoderm cells, lying on either side of the notochord and neural tube, and forming sequentially starting at the head during development of the embryo. Together they give rise to the axial skeleton (from the sclerotome), associated musculature (from the myotome), and dermis (from the dermatome). // Undifferentiated mesodermal components of early trunk or tail segments or metameres, derived from paraxial mesoderm; forms myotomes, sclerotomes and perhaps dermatomes. <a href='http://zfin.org/cgi-bin/ZFIN_jump?record=ZDB-PUB-961014-576'>Kimmel et al, 1995.</a>" [OMD:somite, Wikipedia:Somite, XB:curator, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Somite" EXACT []
synonym: "somites" RELATED []
synonym: "somitic mesoderm" RELATED []
xref: EHDAA:366 ! somite
xref: EHDAA:699 ! somite
xref: FMA:85522 ! Somite
xref: GAID:1306 ! somite
xref: HOG:0000191 ! somite
xref: MAT:0000068 ! somite
xref: MIAA:0000068 ! somite
xref: TAO:0000155 ! somite
xref: XAO:0000058 ! somite
xref: ZFA:0000155 ! somite
is_a: UBERON:0002050 ! embryonic structure
relationship: develops_from UBERON:0003059 ! presomitic mesoderm
relationship: part_of UBERON:0000926 ! mesoderm
relationship: part_of UBERON:0002100 ! trunk
xref: ncithesaurus:Somite ! Somite
xref: BTO:0001558 ! somite

[Term]
id: UBERON:0002330
name: exocrine system
alt_id: UBERON:FMA_85539-MA_0002411
def: "Anatomical system that consists of the glands and parts of glands that produce exocrine secretions and help to integrate and control bodily metabolic activity. Exocrine glands are glands that secrete their products (hormones) into ducts (duct glands). They are the counterparts to endocrine glands, which secrete their products (hormones) directly into the bloodstream (ductless glands) or release hormones (paracrines) that affect only target cells nearby the release site. [Wikipedia]." [Wikipedia:Exocrine_system]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Exocrine system" EXACT []
xref: FMA:85539 ! Exocrine system
xref: MA:0002411 ! exocrine system
is_a: UBERON:0000467 ! anatomical system
disjoint_from: UBERON:0000075 ! subdivision of skeleton
disjoint_from: UBERON:0000949 ! endocrine system
disjoint_from: UBERON:0000990 ! reproductive system
disjoint_from: UBERON:0001004 ! respiratory system
disjoint_from: UBERON:0001007 ! digestive system
disjoint_from: UBERON:0001008 ! urinary system
disjoint_from: UBERON:0001009 ! circulatory system
disjoint_from: UBERON:0001016 ! nervous system
disjoint_from: UBERON:0001032 ! sense organ system
disjoint_from: UBERON:0001033 ! gustatory system
disjoint_from: UBERON:0001434 ! skeleton
disjoint_from: UBERON:0002204 ! musculoskeletal system
disjoint_from: UBERON:0002294 ! biliary system
disjoint_from: UBERON:0002390 ! hematopoietic system
disjoint_from: UBERON:0002405 ! immune system
disjoint_from: UBERON:0002416 ! integumental system
disjoint_from: UBERON:0002423 ! hepatobiliary system
xref: ncithesaurus:Exocrine_System ! Exocrine System

[Term]
id: UBERON:0002331
name: umbilical cord
alt_id: UBERON:FMA_85541-MIAA_0000280
def: "." [Wikipedia:Umbilical_cord]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "connecting stalk" RELATED []
synonym: "Umbilical cord" EXACT []
xref: FMA:85541 ! Umbilical cord
xref: GAID:517 ! umbilical cord
xref: MAT:0000280 ! umbilical cord
xref: MIAA:0000280 ! umbilical cord
is_a: UBERON:0000478 ! extraembryonic structure
xref: ncithesaurus:Umbilical_Cord ! Umbilical Cord
xref: BTO:0001415 ! umbilical cord

[Term]
id: UBERON:0002333
name: pulmonary trunk
alt_id: UBERON:FMA_8612-MA_0002033
def: "Pulmonary arterial trunk which is continuous with the right ventricle." [Wikipedia:Pulmonary_trunk]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Pulmonary artery (trunk)" EXACT []
synonym: "pulmonary artery (trunk)" EXACT []
synonym: "Pulmonary trunk" EXACT []
synonym: "Trunk of pulmonary arterial tree" EXACT []
synonym: "trunk of pulmonary arterial tree" EXACT []
xref: FMA:8612 ! Pulmonary trunk
xref: HOG:0001134 ! pulmonary trunk
xref: MA:0002033 ! pulmonary trunk
xref: OpenCyc:Mx4rv-6d0ZwpEbGdrcN5Y29ycA
is_a: UBERON:0000063 ! organ segment
relationship: part_of UBERON:0001009 ! circulatory system

[Term]
id: UBERON:0002334
name: submandibular duct
alt_id: UBERON:FMA_86266-MA_0002698
def: "." [Wikipedia:Submandibular_duct]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Submandibular duct" EXACT []
xref: FMA:86266 ! Submandibular duct
xref: MA:0002698 ! submandibular duct
is_a: UBERON:0001837 ! duct of salivary gland
relationship: part_of UBERON:0001736 ! submandibular gland
xref: ncithesaurus:Submandibular_Duct ! Submandibular Duct

[Term]
id: UBERON:0002335
name: macula densa
alt_id: UBERON:FMA_86333-MA_0002603
def: "." [Wikipedia:Macula_densa]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Macula densa" EXACT []
xref: FMA:86333 ! Macula densa
xref: MA:0002603 ! macula densa
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0002303 ! juxtaglomerular complex
xref: ncithesaurus:Macula_Densa ! Macula Densa
xref: BTO:0003940 ! macula densa

[Term]
id: UBERON:0002336
name: corpus callosum
alt_id: UBERON:FMA_86464-MA_0000188-MIAA_0000286
def: "The corpus callosum is a thick bundle of nerve fibers comprising a commissural plate connecting the two cerebral hemispheres. It consists of contralateral axon projections that provides communications between the right and left cerebral hemispheres[GO]." [Wikipedia:Corpus_callosum]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Corpus callosum" EXACT []
xref: BTO:0000615
xref: FMA:86464 ! Corpus callosum
xref: GAID:683 ! corpus callosum
xref: MA:0000188 ! corpus callosum
xref: MAT:0000286 ! corpus callosum
xref: MIAA:0000286 ! corpus callosum
xref: NIF_GrossAnatomy:birnlex_1087 ! Corpus callosum
xref: NIF_GrossAnatomy:birnlex_1498
xref: OpenCyc:Mx4rvbNzdZwpEbGdrcN5Y29ycA
is_a: UBERON:0002473 ! intercerebral commissure
xref: ncithesaurus:Corpus_Callosum ! Corpus Callosum

[Term]
id: UBERON:0002337
name: endometrial stroma
alt_id: UBERON:FMA_86487-MA_0002734
comment: This class was created automatically from a combination of ontologies
synonym: "Endometrial stroma" EXACT []
synonym: "endometrium stroma" EXACT []
synonym: "Stroma of endometrium" EXACT []
synonym: "stroma of endometrium" EXACT []
xref: FMA:86487 ! Endometrial stroma
xref: MA:0002734 ! endometrium stroma
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001295 ! endometrium
xref: ncithesaurus:Endometrial_Stroma ! Endometrial Stroma

[Term]
id: UBERON:0002338
name: lamina propria of bronchus
alt_id: UBERON:FMA_86619-MA_0001836
comment: This class was created automatically from a combination of ontologies
synonym: "bronchus lamina propria" EXACT []
synonym: "Lamina propria of bronchus" EXACT []
xref: FMA:86619 ! Lamina propria of bronchus
xref: MA:0001836 ! bronchus lamina propria
is_a: UBERON:0000030 ! lamina propria
intersection_of: UBERON:0000030 ! lamina propria
intersection_of: part_of UBERON:0002185 ! bronchus
relationship: part_of UBERON:0002185 ! bronchus
xref: ncithesaurus:Bronchus_Lamina_Propria ! Bronchus Lamina Propria

[Term]
id: UBERON:0002339
name: epithelium of lobar bronchus
alt_id: UBERON:FMA_86624-MA_0001842
comment: This class was created automatically from a combination of ontologies
synonym: "Epithelium of lobar bronchus" EXACT []
synonym: "Lobar bronchial epithelium" EXACT []
synonym: "lobar bronchial epithelium" EXACT []
synonym: "lobar bronchus epithelium" EXACT []
xref: FMA:86624 ! Epithelium of lobar bronchus
xref: MA:0001842 ! lobar bronchus epithelium
is_a: UBERON:0002031 ! epithelium of bronchus
intersection_of: UBERON:0000483 ! epithelium
intersection_of: part_of UBERON:0002183 ! lobar bronchus
relationship: part_of UBERON:0002183 ! lobar bronchus

[Term]
id: UBERON:0002340
name: epithelium of main bronchus
alt_id: UBERON:FMA_86625-MA_0001847
alt_id: UBERON:0003245
comment: This class was created automatically from a combination of ontologies
synonym: "Epithelium of main bronchus" EXACT []
synonym: "Main bronchial epithelium" EXACT []
synonym: "main bronchial epithelium" EXACT []
synonym: "main bronchus epithelium" EXACT []
xref: FMA:86625 ! Epithelium of main bronchus
xref: HOG:0001034 ! main bronchus epithelium
xref: MA:0001847 ! main bronchus epithelium
xref: EHDAA:5003 ! epithelium
is_a: UBERON:0002031 ! epithelium of bronchus
intersection_of: UBERON:0000483 ! epithelium
intersection_of: part_of UBERON:0002182 ! main bronchus
relationship: part_of UBERON:0002182 ! main bronchus

[Term]
id: UBERON:0002341
name: epithelium of segmental bronchus
alt_id: UBERON:FMA_86626-MA_0001850
comment: This class was created automatically from a combination of ontologies
synonym: "Epithelium of segmental bronchus" EXACT []
synonym: "Segmental bronchial epithelium" EXACT []
synonym: "segmental bronchial epithelium" EXACT []
synonym: "segmental bronchus epithelium" EXACT []
xref: FMA:86626 ! Epithelium of segmental bronchus
xref: MA:0001850 ! segmental bronchus epithelium
is_a: UBERON:0002031 ! epithelium of bronchus
intersection_of: UBERON:0000483 ! epithelium
intersection_of: part_of UBERON:0002184 ! segmental bronchus
relationship: part_of UBERON:0002184 ! segmental bronchus

[Term]
id: UBERON:0002342
name: neural crest
alt_id: UBERON:FMA_86666-MIAA_0000066-XAO_0000048-ZFA_0000045
def: "A group of embryonic cells that loosen and separate from the neural plate and surrounding epidermis during neurulation and migrate to give several different lineages of adult cells. Wikipedia: The neural crest, a transient component of the ectoderm, is located in between the neural tube and the epidermis (or the free margins of the neural folds) of an embryo during neural tube formation. Neural crest cells quickly migrate during or shortly after neurulation, an embryological event marked by neural tube closure." [ISBN:0815318960, OMD:neural+crest, Wikipedia:Neural_crest, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Neural crest" EXACT []
synonym: "neural crest - early" EXACT []
synonym: "neural crest material" RELATED []
xref: EHDAA:1334 ! neural crest
xref: EHDAA:1348 ! neural crest
xref: EHDAA:1354 ! neural crest
xref: EHDAA:1379 ! neural crest
xref: EHDAA:1389 ! neural crest
xref: EHDAA:1399 ! neural crest
xref: EHDAA:1414 ! neural crest
xref: EHDAA:1429 ! neural crest
xref: EHDAA:1439 ! neural crest
xref: EHDAA:1449 ! neural crest
xref: EHDAA:1500 ! neural crest
xref: EHDAA:1989 ! neural crest
xref: EHDAA:2011 ! neural crest
xref: EHDAA:2023 ! neural crest
xref: EHDAA:2045 ! neural crest
xref: EHDAA:2067 ! neural crest
xref: EHDAA:2079 ! neural crest
xref: EHDAA:2091 ! neural crest
xref: EHDAA:2813 ! neural crest
xref: EHDAA:2827 ! neural crest
xref: EHDAA:2921 ! neural crest
xref: EHDAA:308 ! neural crest
xref: EHDAA:324 ! neural crest
xref: EHDAA:3510 ! neural crest
xref: EHDAA:3666 ! neural crest
xref: EHDAA:3682 ! neural crest
xref: EHDAA:838 ! neural crest
xref: EHDAA:862 ! neural crest
xref: EHDAA:872 ! neural crest
xref: EHDAA:882 ! neural crest
xref: EHDAA:892 ! neural crest
xref: EHDAA:906 ! neural crest
xref: FMA:86666 ! Neural crest
xref: GAID:1310 ! neural crest
xref: HOG:0000057 ! neural crest
xref: MAT:0000066 ! neural crest - early
xref: MIAA:0000066 ! neural crest - early
xref: TAO:0000045 ! neural crest
xref: XAO:0000048 ! neural crest
xref: ZFA:0000045 ! neural crest
is_a: UBERON:0002346 ! neural ectoderm
xref: ncithesaurus:Neural_Crest ! Neural Crest
xref: BTO:0001764 ! neural crest

[Term]
id: UBERON:0002343
name: musculature of abdomen
alt_id: UBERON:FMA_86917-ZFA_0001327
comment: TODO - check musculature vs muscle system; part_of vs is_a
synonym: "Abdominal musculature" EXACT []
synonym: "abdominal musculature" EXACT []
synonym: "Musculature of abdomen" EXACT []
xref: FMA:86917 ! Musculature of abdomen
xref: TAO:0001327 ! abdominal musculature
xref: ZFA:0001327 ! abdominal musculature
is_a: UBERON:0001630 ! muscle organ
relationship: part_of UBERON:0001015 ! comment

[Term]
id: UBERON:0002345
name: descending thoracic aorta
alt_id: UBERON:FMA_87217-MA_0002572
comment: This class was created automatically from a combination of ontologies
synonym: "Descending thoracic aorta" EXACT []
xref: FMA:87217 ! Descending thoracic aorta
xref: MA:0002572 ! descending thoracic aorta
is_a: UBERON:0000063 ! organ segment
relationship: part_of UBERON:0001514 ! descending aorta
relationship: part_of UBERON:0001515 ! thoracic aorta

[Term]
id: UBERON:0002346
name: neural ectoderm
alt_id: UBERON:FMA_87657-MIAA_0000176-XAO_0000042-ZFA_0001120
def: "The first stage of neural differentiation of ectoderm - it gives rise to the neural and neural crest cells, // Embryonic ectoderm that gives rise to nervous tissue." [NLM:neuroectoderm, Wikipedia:Neuroectoderm]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "neuaral ectoderm" RELATED []
synonym: "Neural ectoderm" EXACT []
synonym: "neurectoderm" EXACT []
synonym: "neuroectoderm" EXACT []
synonym: "presumptive central nervous system" RELATED []
xref: BILA:0000039
xref: EHDAA:1498 ! neural ectoderm
xref: EHDAA:255 ! neural ectoderm
xref: FBbt:00001061 ! ventral neurogenic region
xref: FMA:87657 ! Neural ectoderm
xref: HOG:0000150 ! neuroectoderm
xref: MAT:0000176 ! neurectoderm
xref: MIAA:0000176 ! neurectoderm
xref: TAO:0001120 ! neuroectoderm
xref: XAO:0000042 ! neuroectoderm
xref: ZFA:0001120 ! neuroectoderm
is_a: UBERON:0000923 ! germ layer
relationship: part_of UBERON:0000924 ! ectoderm
xref: ncithesaurus:Neuroectoderm ! Neuroectoderm

[Term]
id: UBERON:0002347
name: thoracic vertebra
alt_id: UBERON:FMA_9139-MA_0000314
def: "." [Wikipedia:Thoracic_vertebra]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Dorsal vertebra" EXACT []
synonym: "dorsal vertebra" EXACT []
synonym: "Thoracic vertebra" EXACT []
synonym: "Vertebra thoracica" EXACT []
synonym: "vertebra thoracica" EXACT []
xref: FMA:9139 ! Thoracic vertebra
xref: GAID:244 ! thoracic vertebrae
xref: MA:0000314 ! thoracic vertebra
xref: OpenCyc:Mx4rvdZIBpwpEbGdrcN5Y29ycA
is_a: UBERON:0002412 ! vertebra
intersection_of: UBERON:0002412 ! vertebra
intersection_of: part_of UBERON:0000915 ! thorax
relationship: part_of UBERON:0000915 ! thorax
xref: ncithesaurus:Thoracic_Vertebra ! Thoracic Vertebra

[Term]
id: UBERON:0002348
name: epicardium
alt_id: UBERON:FMA_9461-XAO_0000316-ZFA_0005057
def: "Region of visceral serous pericardium which has as its part, the mesothelium, subepicardial layer of epicardium and the fibroelastic connective tissue that is attached to the myocardium and is continuous with the parietal serous pericardium. // External layer of the heart." [Wikipedia:Epicardium, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Epicardium" EXACT []
synonym: "heart epicardium" EXACT []
synonym: "Visceral serous pericardium of heart" EXACT []
synonym: "visceral serous pericardium of heart" EXACT []
xref: FMA:9461 ! Epicardium
xref: galen:Epicardium
xref: TAO:0005057 ! epicardium
xref: XAO:0000316 ! epicardium
xref: ZFA:0005057 ! epicardium
is_a: UBERON:0000064 ! organ part
relationship: develops_from UBERON:0001048 ! primordium
relationship: part_of UBERON:0000948 ! heart
xref: ncithesaurus:Epicardium ! Epicardium

[Term]
id: UBERON:0002349
name: myocardium
alt_id: UBERON:FMA_9462-MA_0000164-XAO_0000065-ZFA_0001319
def: "middle muscular layer of the heart wall[M-W]. Muscle layer of organ which has as its parts the myocardium proper and the conducting system of the heart[FMA]." [Wikipedia:Myocardium]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "cardiac muscle" RELATED []
synonym: "Heart muscle" EXACT []
synonym: "heart muscle" EXACT []
synonym: "heart myocardium" EXACT []
synonym: "Muscle of heart" EXACT []
synonym: "muscle of heart" EXACT []
synonym: "Myocardium" EXACT []
xref: BTO:0000901
xref: EFO:0000819 ! myocardium
xref: EHDAA:1275 ! myocardium
xref: EHDAA:1283 ! myocardium
xref: EHDAA:1926 ! myocardium
xref: EHDAA:1934 ! myocardium
xref: EHDAA:3383 ! myocardium
xref: EHDAA:3395 ! myocardium
xref: EHDAA:430 ! myocardium
xref: EHDAA:446 ! myocardium
xref: EHDAA:454 ! myocardium
xref: EHDAA:462 ! myocardium
xref: EHDAA:470 ! myocardium
xref: EHDAA:478 ! myocardium
xref: EHDAA:5347 ! myocardium
xref: EHDAA:5356 ! myocardium
xref: EHDAA:776 ! myocardium
xref: EHDAA:784 ! myocardium
xref: EHDAA:792 ! myocardium
xref: EHDAA:804 ! myocardium
xref: EHDAA:812 ! myocardium
xref: FMA:9462 ! Myocardium
xref: GAID:173 ! myocardium
xref: MA:0000164 ! myocardium
xref: MAT:0000453 ! myocardium
xref: ncithesaurus:Myocardium
xref: OpenCyc:Mx4ro36AFrCvEduAAAAOpmP6tw
xref: TAO:0001319 ! myocardium
xref: XAO:0000065 ! myocardium
xref: ZFA:0001319 ! myocardium
is_a: UBERON:0001015 ! muscle system
relationship: part_of UBERON:0000948 ! heart

[Term]
id: UBERON:0002350
name: conducting system of heart
alt_id: UBERON:FMA_9476-ZFA_0005063
def: "Conducting tissue of heart which consists of specialized cardiac myocyte in the myocardium." []
comment: This class was created automatically from a combination of ontologies
synonym: "Cardiac conduction system" EXACT []
synonym: "cardiac conduction system" EXACT []
synonym: "Cardionector" EXACT []
synonym: "cardionector" EXACT []
synonym: "central conduction system" RELATED []
synonym: "Conducting system of heart" EXACT []
xref: FMA:9476 ! Conducting system of heart
xref: HOG:0001271 ! cardiac conducting system
xref: TAO:0005063 ! cardiac conduction system
xref: ZFA:0005063 ! cardiac conduction system
is_a: UBERON:0001133 ! cardiac muscle tissue

[Term]
id: UBERON:0002351
name: sinuatrial node
alt_id: UBERON:FMA_9477-MA_0000097-ZFA_0005069
def: "part of the cardiac conduction system that controls the timing of heart muscle contraction. It relays electrical signals to the AV node[GO]. Subdivision of conducting system of heart at the junction of the right atrium and the superior vena cava, around the sinoatrial nodal branch of right coronary artery and is continuous with the internodal tract[FMA]." [Wikipedia:Sinoatrial_node, GO:0003163]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Koch's node" EXACT []
synonym: "koch's node" EXACT []
synonym: "Node of Keith-Flack" EXACT []
synonym: "node of keith-flack" EXACT []
synonym: "SA nodal muscle tissue" EXACT []
synonym: "sa nodal muscle tissue" EXACT []
synonym: "SA node" EXACT []
synonym: "sa node" EXACT []
synonym: "Sinoatrial node" EXACT []
synonym: "sinoatrial node" EXACT []
synonym: "Sinu-atrial node" EXACT []
synonym: "sinu-atrial node" EXACT []
synonym: "Sinuatrial nodal muscle tissue" EXACT []
synonym: "sinuatrial nodal muscle tissue" EXACT []
synonym: "Sinuatrial node" EXACT []
synonym: "Sinus node" EXACT []
synonym: "sinus node" EXACT []
synonym: "Sinus node of Keith and Flack" EXACT []
synonym: "sinus node of keith and flack" EXACT []
xref: FMA:9477 ! Sinuatrial node
xref: GAID:561 ! sinoatrial node
xref: MA:0000097 ! sinoatrial node
xref: OpenCyc:Mx4rOhejDGMcEd2AAABQjYGu0g
xref: TAO:0005069 ! sinoatrial node
xref: ZFA:0005069 ! sinoatrial node
is_a: UBERON:0001133 ! cardiac muscle tissue
relationship: part_of UBERON:0002350 ! conducting system of heart
xref: ncithesaurus:Sinoatrial_Node ! Sinoatrial Node

[Term]
id: UBERON:0002352
name: atrioventricular node
alt_id: UBERON:FMA_9478-MA_0000095-ZFA_0005070
def: "Subdivision of conducting system of heart which is located in the muscular part of the interatrial septum that is continuous with the atrioventricular bundle." [Wikipedia:Atrioventricular_node]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Aschoff-Tawara node" EXACT []
synonym: "aschoff-tawara node" EXACT []
synonym: "Atrioventricular nodal muscle tissue" EXACT []
synonym: "atrioventricular nodal muscle tissue" EXACT []
synonym: "Atrioventricular node" EXACT []
synonym: "AV nodal muscle tissue" EXACT []
synonym: "av nodal muscle tissue" EXACT []
synonym: "AV node" EXACT []
synonym: "av node" EXACT []
synonym: "Node of Tawara" EXACT []
synonym: "node of tawara" EXACT []
xref: EFO:0000276 ! atrioventricular node
xref: FMA:9478 ! Atrioventricular node
xref: GAID:558 ! atrioventricular node
xref: HOG:0001474 ! atrioventricular node
xref: MA:0000095 ! atrioventricular node
xref: MAT:0000498 ! atrioventricular node
xref: OpenCyc:Mx4rMfD91mMcEd2AAABQjYGu0g
xref: TAO:0005070 ! atriovetricular node
xref: ZFA:0005070 ! atrioventricular node
is_a: UBERON:0001133 ! cardiac muscle tissue
relationship: part_of UBERON:0002081 ! cardiac atrium
relationship: part_of UBERON:0002082 ! cardiac ventricle
relationship: part_of UBERON:0002350 ! conducting system of heart
xref: ncithesaurus:Atrioventricular_Node ! Atrioventricular Node

[Term]
id: UBERON:0002353
name: atrioventricular bundle
alt_id: UBERON:FMA_9484-MA_0002576
def: "Subdivision of conducting system of heart which consists of the atrial part and the ventricular part of the atrioventricular bundle and is the direct continuation of the atrioventricular node." [Wikipedia:Bundle_of_His]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Atrioventricular bundle" EXACT []
synonym: "Atrioventricular bundle muscle tissue" EXACT []
synonym: "atrioventricular bundle muscle tissue" EXACT []
synonym: "Atrioventricular fasciculus" EXACT []
synonym: "atrioventricular fasciculus" EXACT []
synonym: "Bundle of His" EXACT []
synonym: "bundle of his" RELATED []
synonym: "His bundle" RELATED []
xref: FMA:9484 ! Atrioventricular bundle
xref: GAID:559 ! bundle of his
xref: galen:BundleOfHis
xref: MA:0002576 ! atrioventricular bundle
xref: OpenCyc:Mx4rUv1WcGPJEd2AAABQjYGu0g
is_a: UBERON:0001133 ! cardiac muscle tissue
relationship: part_of UBERON:0002350 ! conducting system of heart
xref: ncithesaurus:Atrioventricular_Bundle ! Atrioventricular Bundle

[Term]
id: UBERON:0002354
name: purkinje fiber
alt_id: UBERON:FMA_9492-MA_0000096
def: "Conducting tissue of heart which consists of Purkinje myocytes." [Wikipedia:Purkinje_fiber]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Myofibra conducens cardiacus" EXACT []
synonym: "myofibra conducens cardiacus" EXACT []
synonym: "Purkinje fiber" EXACT []
xref: FMA:9492 ! Purkinje fiber
xref: GAID:560 ! purkinje fiber
xref: MA:0000096 ! purkinje fiber
is_a: UBERON:0001133 ! cardiac muscle tissue
relationship: part_of UBERON:0002350 ! conducting system of heart
xref: ncithesaurus:Purkinje_Fiber ! Purkinje Fiber

[Term]
id: UBERON:0002355
name: pelvis
alt_id: UBERON:FMA_9578-MA_0000030
def: "Subdivision of trunk, which is demarcated from the abdomen by the plane of the superior pelvic aperture, and from the perineum by the inferior surface of the pelvic diaphragm; together with the thorax, abdomen, and perineum, it constitutes the trunk. Examples: There is only one pelvis." [Wikipedia:Pelvis]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Pelvis" EXACT []
xref: BTO:0001006
xref: FMA:9578 ! Pelvis
xref: GAID:87 ! pelvis
xref: MA:0000030 ! pelvis
xref: OpenCyc:Mx4rvVjiTJwpEbGdrcN5Y29ycA
is_a: UBERON:0000475 ! organism subdivision
relationship: part_of UBERON:0002100 ! trunk
xref: ncithesaurus:Pelvis ! Pelvis

[Term]
id: UBERON:0002356
name: perineum
alt_id: UBERON:FMA_9579-MA_0002466
def: "Subdivision of trunk, which is demarcated from the pelvis by the inferior surface of the pelvic diaphragm and from the lower limbs by the perineofemoral lines; together with the thorax, abdomen, and pelvis, it constitutes the trunk. Examples: There is only one perineum." [Wikipedia:Perineum]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Perineal region" EXACT []
synonym: "perineal region" EXACT []
synonym: "Perineum" EXACT []
xref: FMA:9579 ! Perineum
xref: GAID:90 ! perineum
xref: MA:0002466 ! perineum
xref: OpenCyc:Mx4rvcHSh5wpEbGdrcN5Y29ycA
is_a: UBERON:0000475 ! organism subdivision
relationship: part_of UBERON:0002100 ! trunk
xref: ncithesaurus:Perineum ! Perineum

[Term]
id: UBERON:0002357
name: serous pericardium
alt_id: UBERON:FMA_9582-MA_0002739
def: "Serous membrane which has as its parts the epicardium and parietal serous pericardium that surrounds pericardial cavity." [Wikipedia:Serous_pericardium]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Serous pericardium" EXACT []
synonym: "Serous portion of pericardium" EXACT []
synonym: "serous portion of pericardium" EXACT []
xref: FMA:9582 ! Serous pericardium
xref: MA:0002739 ! serous pericardium
is_a: UBERON:0000042 ! serous membrane
relationship: part_of UBERON:0002406 ! pericardial sac

[Term]
id: UBERON:0003684
name: abdominal cavity
synonym: "cavitas abdominis" RELATED [GAID:17]
synonym: "cavity of abdominal compartment" EXACT [FMA:12266]
synonym: "cavity of compartment of abdomen" EXACT [FMA:12266]
synonym: "space of abdominal compartment" EXACT [FMA:12266]
xref: FMA:12266 ! Abdominal cavity
xref: GAID:17 ! abdominal cavity
is_a: UBERON:0002323 ! body cavity
relationship: part_of UBERON:0000916 ! abdomen
xref: ncithesaurus:Abdominal_Cavity ! Abdominal Cavity

[Term]
id: UBERON:0003886
name: body cavity precursor
intersection_of: UBERON:0002553 ! anatomical cavity
intersection_of: develops_into UBERON:0002323
relationship: surrounded_by UBERON:0000926 ! mesoderm

[Term]
id: UBERON:0003887
name: intraembryonic coelom
synonym: "somatic coelom" EXACT []
def: "In the development of the human embryo the intraembryonic coelom (or somatic coelom) is a portion of the conceptus forming in the mesoderm. During the second week of development, the lateral mesoderm splits into a dorsal somatic mesoderm (somatopleure) and a ventral splanchnic mesoderm (splanchnopleure). The resulting cavity between the somatopleure and splanchnopleure is called the intraembryonic coelom. This space will give rise to the thoracic and abdominal cavities. It briefly has a connection with the extraembryonic coelom[WP]." [Wikipedia:Intraembryonic_coelom]
is_a: UBERON:0003886

[Term]
id: UBERON:0003888
name: extraembryonic coelom
synonym: "chorionic cavity" EXACT []
def: "cavity between Heuser's membrane and the Trophoblast[WP]." [Wikipedia:Extraembryonic_coelom]
is_a: UBERON:0003886

[Term]
id: UBERON:0002323
name: body cavity
alt_id: UBERON:FMA_85006-MA_0002447-ZFA_0001438
alt_id: UBERON:0000169
def: "fluid-filled space between epidermis and outer lining of gut cavity." [Wikipedia:Body_cavity]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Body cavity" EXACT []
synonym: "ventral body cavity" NARROW []
synonym: "coelom" EXACT []
synonym: "coelomic cavity" EXACT []
xref: FBbt:00005060 ! hemocoel
xref: TAO:0001438 ! coelom
xref: ZFA:0001438 ! coelom
xref: FMA:85006 ! Body cavity
xref: galen:BodyCavity
xref: MA:0002447 ! body cavity
is_a: UBERON:0002553 ! anatomical cavity
relationship: part_of UBERON:0002100 ! trunk
xref: ncithesaurus:Cavity ! Body Cavity
xref: BTO:0001707 ! coelom

[Term]
id: UBERON:0002358
name: peritoneum
alt_id: UBERON:FMA_9584-XAO_0000139-ZFA_0005120
def: "A serous membrane that forms the lining of the abdominal cavity or the coelom — it covers most of the intra-abdominal (or coelomic) organs — in higher vertebrates and some invertebrates (annelids, for instance). It is composed of a layer of mesothelium supported by a thin layer of connective tissue. The peritoneum both supports the abdominal organs and serves as a conduit for their blood and lymph vessels and nerves[WP]." [Wikipedia:Peritoneum, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Peritoneum" EXACT []
xref: FMA:9584 ! Peritoneum
xref: GAID:18 ! peritoneum
xref: HOG:0001257 ! peritoneum
xref: TAO:0005120 ! peritoneum
xref: XAO:0000139 ! peritoneum
xref: ZFA:0005120 ! peritoneum
xref: ncithesaurus:Peritoneum ! Peritoneum
xref: BTO:0001472 ! peritoneum
is_a: UBERON:0000483 ! epithelium
is_a: UBERON:0000042 ! serous membrane
relationship: part_of UBERON:0003684 ! abdominal cavity
relationship: develops_from UBERON:0000926 ! mesoderm

[Term]
id: UBERON:0001366
name: parietal peritoneum
alt_id: UBERON:FMA_21451-ZFA_0005131
comment: fix coordinated with ZFA
def: "The peritoneum that lines the walls of the peritoneal cavity." [Wikipedia:Parietal_peritoneum, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Parietal peritoneum" EXACT []
xref: FMA:21451 ! Parietal peritoneum
xref: HOG:0001527 ! parietal peritoneum
xref: TAO:0005131 ! parietal peritoneum
xref: ZFA:0005131 ! parietal peritoneum
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0002358 ! peritoneum
relationship: bounds UBERON:0001179 ! peritoneal cavity
relationship: surrounds UBERON:0003684 ! abdominal cavity

[Term]
id: UBERON:0001178
name: visceral peritoneum
alt_id: UBERON:FMA_14703-ZFA_0005132
def: "The peritoneum that covers the external surfaces of most abdominal organs." [Wikipedia:Visceral_peritoneum, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Visceral peritoneum" EXACT []
xref: FMA:14703 ! Visceral peritoneum
xref: HOG:0001528 ! visceral peritoneum
xref: TAO:0005132 ! visceral peritoneum
xref: ZFA:0005132 ! visceral peritoneum
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0002358 ! peritoneum

[Term]
id: UBERON:0001297
name: serosa of uterus
alt_id: UBERON:FMA_17744-MA_0001729
def: "Outer serosa layer of the uterus." [Wikipedia:Perimetrium]
comment: TODO - check for parallel structure with peritoneum
synonym: "perimetrium" RELATED [http://en.wikipedia.org/wiki/Perimetrium]
synonym: "Serosa of uterus" EXACT []
synonym: "Serous coat of uterus" EXACT []
synonym: "serous coat of uterus" EXACT []
synonym: "Tunica serosa (Perimetrium)" EXACT []
synonym: "tunica serosa (perimetrium)" EXACT []
synonym: "Uterine serosa" EXACT []
synonym: "uterine serosa" EXACT []
synonym: "uterus serosa" EXACT []
synonym: "Visceral peritoneum of uterus" EXACT []
synonym: "visceral peritoneum of uterus" EXACT []
xref: FMA:17744 ! Serosa of uterus
xref: MA:0001729 ! uterus serosa
is_a: UBERON:0000042 ! serous membrane
intersection_of: UBERON:0000042 ! serous membrane
intersection_of: part_of UBERON:0000995 ! uterus
relationship: part_of UBERON:0000995 ! uterus

[Term]
id: UBERON:0002359
name: fibrous pericardium
alt_id: UBERON:FMA_9586-MA_0002738
def: "Membrane organ which is attached to the pericardial sac proper and the central tendon of diaphragm and is continuous with the pretracheal fascia." [Wikipedia:Fibrous_pericardium]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Fibrous pericardium" EXACT []
synonym: "Fibrous portion of pericardium" EXACT []
synonym: "fibrous portion of pericardium" EXACT []
xref: FMA:9586 ! Fibrous pericardium
xref: MA:0002738 ! fibrous pericardium
is_a: UBERON:0000062 ! organ
relationship: part_of UBERON:0002407 ! pericardium

[Term]
id: UBERON:0002360
name: meninx
alt_id: UBERON:FMA_9589-MA_0001113
def: "Membrane organ that surrounds the brain and the spinal cord // Wikipedia: system of membranes which envelops the central nervous system. Whereas cyclostomes and fishes only have a single envelope called the primitive meninx, amphibians have two layers, consisting of an outer dura mater which is extremely dense and protective, and a pia-arachnoid or secondary meninx which is more delicate and vascular. Mammals have three meninges: pia mater (which follows all the convolutions of the brain and is the most interior), the arachnoid layer (which is delicate and sends strands to the pia mater), and the dura mater (the outer, more protective meninx). The area between the dura mater and the arachnoid layer is called the subdural space; the area between the arachnoid layer is called the subarachnoid space. An additional layer of tissue lies between the two hemispheres of the cerebrum and is called the falx cerebri. " [http://www.shsu.edu/~bio_mlt/Chap15.html, Wikipedia:Meninx]
comment: TODO: check singular/plural
subset: uberon_slim
synonym: "meninges" EXACT []
synonym: "Meninx" EXACT []
xref: BTO:0000144
xref: EFO:0000584
xref: EFO:0000867 ! meninges
xref: EHDAA:1365 ! meninges
xref: EHDAA:1959 ! meninges
xref: EHDAA:1999 ! meninges
xref: EHDAA:2097 ! meninges
xref: EHDAA:2683 ! meninges
xref: EHDAA:2831 ! meninges
xref: EHDAA:2865 ! meninges
xref: EHDAA:3688 ! meninges
xref: EHDAA:3708 ! meninges
xref: EHDAA:5458 ! meninges
xref: EHDAA:5476 ! meninges
xref: FMA:9589 ! Meninx
xref: GAID:687 ! meninge
xref: HOG:0001295 ! meninges
xref: MA:0001113 ! meninges
xref: MAT:0000113 ! meninges
xref: ncithesaurus:Meninges
xref: ZFA:0001355 ! primitive meninx
is_a: UBERON:0000062 ! organ
relationship: develops_from UBERON:0000926 ! mesoderm
relationship: part_of UBERON:0001017 ! central nervous system

[Term]
id: UBERON:0002361
name: pia mater
alt_id: UBERON:FMA_9590-MA_0001116
def: "." [Wikipedia:Pia_mater]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Pia mater" EXACT []
synonym: "Pia mater of neuraxis" EXACT []
synonym: "pia mater of neuraxis" EXACT []
xref: EHDAA:1367 ! pia mater
xref: EHDAA:1961 ! pia mater
xref: EHDAA:2001 ! pia mater
xref: EHDAA:2099 ! pia mater
xref: EHDAA:2685 ! pia mater
xref: EHDAA:2833 ! pia mater
xref: EHDAA:2867 ! pia mater
xref: EHDAA:3692 ! pia mater
xref: EHDAA:3710 ! pia mater
xref: EHDAA:6566 ! pia mater
xref: EHDAA:6583 ! pia mater
xref: FMA:9590 ! Pia mater
xref: GAID:693 ! pia mater
xref: MA:0001116 ! pia mater
is_a: UBERON:0002360 ! meninx
relationship: part_of UBERON:0002360 ! meninx
xref: ncithesaurus:Pia_Mater ! Pia Mater
xref: BTO:0001635 ! pia mater

[Term]
id: UBERON:0002362
name: arachnoid mater
alt_id: UBERON:FMA_9591-MA_0001114
def: "." [Wikipedia:Arachnoid_mater]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Arachnoid" EXACT []
synonym: "arachnoid" EXACT []
synonym: "Arachnoid mater" EXACT []
synonym: "Arachnoid mater of neuraxis" EXACT []
synonym: "arachnoid mater of neuraxis" EXACT []
xref: FMA:9591 ! Arachnoid mater
xref: GAID:688 ! arachnoid
xref: MA:0001114 ! arachnoid mater
xref: OpenCyc:Mx4rve5HlJwpEbGdrcN5Y29ycA
is_a: UBERON:0002360 ! meninx
relationship: part_of UBERON:0002360 ! meninx
xref: ncithesaurus:Arachnoiditis ! Arachnoiditis
xref: BTO:0001636 ! arachnoid mater

[Term]
id: UBERON:0002363
name: dura mater
alt_id: UBERON:FMA_9592-MA_0001115
def: "." [Wikipedia:Dura_mater]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Dura mater" EXACT []
synonym: "Dura mater of neuraxis" EXACT []
synonym: "dura mater of neuraxis" EXACT []
xref: FMA:9592 ! Dura mater
xref: GAID:691 ! dura mater
xref: MA:0001115 ! dura mater
is_a: UBERON:0002360 ! meninx
relationship: part_of UBERON:0002360 ! meninx
xref: ncithesaurus:Dura_Mater ! Dura Mater
xref: BTO:0001637 ! dura mater

[Term]
id: UBERON:0002364
name: tympanic membrane
alt_id: UBERON:FMA_9595-MA_0000257
def: "." [Wikipedia:Tympanic_membrane]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Ear drum" EXACT []
synonym: "ear drum" EXACT []
synonym: "Lateral wall of tympanic cavity" EXACT []
synonym: "lateral wall of tympanic cavity" EXACT []
synonym: "Membranous wall of tympanic cavity" EXACT []
synonym: "membranous wall of tympanic cavity" EXACT []
synonym: "Rivinus' membrane" EXACT []
synonym: "rivinus' membrane" EXACT []
synonym: "Tympanic membrane" EXACT []
xref: FMA:9595 ! Tympanic membrane
xref: GAID:870 ! tympanic membrane
xref: HOG:0001146 ! tympanic membrane
xref: MA:0000257 ! tympanic membrane
is_a: UBERON:0000094 ! membrane organ
relationship: part_of UBERON:0001756 ! middle ear
xref: ncithesaurus:Tympanic_Membrane ! Tympanic Membrane

[Term]
id: UBERON:0002365
name: exocrine gland
alt_id: UBERON:FMA_9596-MA_0002564
def: "." [Wikipedia:Exocrine_gland]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Ducted gland" EXACT []
synonym: "ducted gland" EXACT []
synonym: "Exocrine gland" EXACT []
synonym: "exocrine gland" EXACT []
synonym: "Glandula exocrina" EXACT []
synonym: "glandula exocrina" EXACT []
xref: BTO:0000765
xref: FMA:9596 ! Exocrine gland
xref: GAID:34 ! exocrine gland
xref: MA:0002564 ! exocrine gland
is_a: UBERON:0002530 ! gland
relationship: part_of UBERON:0002330 ! exocrine system
xref: ncithesaurus:Exocrine_Gland ! Exocrine Gland

[Term]
id: UBERON:0002366
name: bulbo-urethral gland
alt_id: UBERON:FMA_9599-MA_0000401
def: "Lobular organ the parenchyma of which consists of glandular acini which communicate the bulbar part of the urethra. Examples: There only two instances, right and left bulbo-urethral glands." [Wikipedia:Bulbo-urethral_gland]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Bulbo-urethral gland" EXACT []
synonym: "Bulbourethral gland" EXACT []
synonym: "bulbourethral gland" EXACT []
synonym: "Cowper's gland" EXACT []
synonym: "cowper's gland" EXACT []
synonym: "Cowper's glands" EXACT []
synonym: "cowper's glands" EXACT []
xref: FMA:9599 ! Bulbo-urethral gland
xref: GAID:387 ! bulbourethral gland
xref: MA:0000401 ! bulbourethral gland
is_a: UBERON:0002530 ! gland
relationship: part_of UBERON:0000990 ! reproductive system
relationship: part_of UBERON:0001333 ! male urethra
relationship: part_of UBERON:0002330 ! exocrine system
xref: BTO:0001698 ! bulbourethral gland

[Term]
id: UBERON:0003820
name: prostate bud
def: "A region of the fetal urogenital sinus epithelium destined to become the prostate[GO]." [GO:0060513]
synonym: "prostatic bud" EXACT []
is_a: UBERON:0002050 ! embryonic structure

[Term]
id: UBERON:0002367
name: prostate
alt_id: UBERON:FMA_9600-MA_0000404-MIAA_0000078
def: "Lobular organ the parenchyma of which has as its parts glandular acini which are continuous with the prostatic part of the urethra. Examples: There is only one prostate." [Wikipedia:Prostate]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Prostate" EXACT []
synonym: "prostate gland" EXACT []
xref: BTO:0001129
xref: EFO:0000858 ! prostate
xref: FMA:9600 ! Prostate
xref: GAID:392 ! prostate
xref: HOG:0001261 ! prostate
xref: MA:0000404 ! prostate gland
xref: MAT:0000078 ! prostate
xref: MIAA:0000078 ! prostate
xref: ncithesaurus:Prostate_Gland
xref: OpenCyc:Mx4rv6trqZwpEbGdrcN5Y29ycA
is_a: UBERON:0002530 ! gland
relationship: develops_from UBERON:0003280

[Term]
id: UBERON:0002368
name: endocrine gland
alt_id: UBERON:FMA_9602-MA_0002563
def: "." [Wikipedia:Endocrine_gland]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Ductless gland" EXACT []
synonym: "ductless gland" EXACT []
synonym: "Endocrine gland" EXACT []
synonym: "Glandula endocrina" EXACT []
synonym: "glandula endocrina" EXACT []
xref: FMA:9602 ! Endocrine gland
xref: GAID:335 ! endocrine gland
xref: MA:0002563 ! endocrine gland
xref: OpenCyc:Mx4rvbkiRZwpEbGdrcN5Y29ycA
is_a: UBERON:0002530 ! gland
relationship: part_of UBERON:0000949 ! endocrine system
xref: ncithesaurus:Endocrine_Gland ! Endocrine Gland
xref: BTO:0001488 ! endocrine gland

[Term]
id: UBERON:0002369
name: adrenal gland
alt_id: UBERON:FMA_9604-MA_0000116-MIAA_0000071-XAO_0000164
def: "This gland can either be a discrete structure located bilaterally above each kidney, or a cluster of cells in the head kidney that perform the functions of the adrenal gland. In either case, this organ consists of two cells types, aminergic chromaffin cells and steroidogenic cortical cells[GO]." [Wikipedia:Adrenal_gland]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Adrenal gland" EXACT []
synonym: "adrenal medulla cell" RELATED []
synonym: "Suprarenal gland" EXACT []
synonym: "suprarenal gland" RELATED []
xref: BTO:0000047
xref: EFO:0000238 ! adrenal gland
xref: FMA:9604 ! Adrenal gland
xref: GAID:446 ! adrenal gland
xref: galen:AdrenalGland
xref: MA:0000116 ! adrenal gland
xref: MAT:0000071 ! adrenal gland
xref: MIAA:0000071 ! adrenal gland
xref: OpenCyc:Mx4rvXYiz5wpEbGdrcN5Y29ycA
xref: XAO:0000164 ! adrenal gland
is_a: UBERON:0002530 ! gland
relationship: part_of UBERON:0000916 ! abdomen
relationship: part_of UBERON:0000949 ! endocrine system
xref: ncithesaurus:Adrenal_Gland ! Adrenal Gland

[Term]
id: UBERON:0002370
name: thymus
alt_id: UBERON:FMA_9607-MA_0000142-MIAA_0000080-XAO_0000163-ZFA_0001078
def: "Anatomical structure of largely lymphoid tissue that functions in cell-mediated immunity by being the site where T cells develop." [NLM:thymus, Wikipedia:Thymus]
comment: check - a subtype of gland? not in GO. NCIT has thymus and thymus gland
subset: uberon_slim
synonym: "Thymus" EXACT []
synonym: "Thymus gland" EXACT []
synonym: "thymus gland" EXACT []
xref: BTO:0001374
xref: EFO:0000860 ! thymus
xref: EHDAA:9119 ! thymus
xref: FMA:9607 ! Thymus
xref: GAID:464 ! thymus gland
xref: HOG:0000253 ! thymus
xref: MA:0000142 ! thymus
xref: MAT:0000080 ! thymus
xref: MIAA:0000080 ! thymus
xref: TAO:0001078 ! thymus
xref: XAO:0000163 ! thymus
xref: ZFA:0001078 ! thymus
is_a: UBERON:0000062 ! organ
relationship: part_of UBERON:0002224 ! thoracic cavity
relationship: part_of UBERON:0002390 ! hematopoietic system
relationship: part_of UBERON:0002405 ! immune system
xref: ncithesaurus:Thymus_Gland ! Thymus Gland

[Term]
id: UBERON:0002371
name: bone marrow
alt_id: UBERON:FMA_9608-MA_0000134-MIAA_0000084-XAO_0000123-ZFA_0000669
def: "The zebrafish head kidney consists of fused bilateral lobes located in the anterior part of the kidney. It is analogous to the mammalian bone marrow and the primary site of definitive hematopoiesis. <a href='ZFIN_jump?record=ZDB-PUB-040923-1'>Davidson and Zon 2004.</a>" [Wikipedia:Bone_marrow, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "anterior kidney" RELATED []
synonym: "Bone marrow" EXACT []
synonym: "head kidney" BROAD []
synonym: "kidney marrow" RELATED []
synonym: "Medulla ossea" EXACT []
synonym: "medulla ossea" EXACT []
xref: BTO:0000141
xref: EFO:0000868 ! bone marrow
xref: FMA:9608 ! Bone marrow
xref: GAID:1287 ! bone marrow
xref: galen:BoneMarrow
xref: HOG:0001218 ! bone marrow
xref: MA:0000134 ! bone marrow
xref: MAT:0000084 ! bone marrow
xref: MIAA:0000084 ! bone marrow
xref: OpenCyc:Mx4rvVm-FpwpEbGdrcN5Y29ycA
xref: TAO:0000669 ! head kidney
xref: XAO:0000123 ! bone marrow
xref: ZFA:0000669 ! head kidney
is_a: UBERON:0000479 ! portion of tissue
relationship: part_of UBERON:0001474 ! bone
relationship: part_of UBERON:0002390 ! hematopoietic system
xref: ncithesaurus:Bone_Marrow ! Bone Marrow

[Term]
id: UBERON:0002372
name: tonsil
alt_id: UBERON:FMA_9609-MA_0000143
def: "." [Wikipedia:Tonsil]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Tonsil" EXACT []
xref: BTO:0001387
xref: FMA:9609 ! Tonsil
xref: GAID:341 ! tonsil
xref: HOG:0001139 ! tonsil
xref: MA:0000143 ! tonsil
xref: OpenCyc:Mx4rvVivrZwpEbGdrcN5Y29ycA
is_a: UBERON:0001735 ! tonsillar ring
xref: ncithesaurus:Tonsil ! Tonsil

[Term]
id: UBERON:0002373
name: palatine tonsil
alt_id: UBERON:FMA_9610-MA_0000775-MIAA_0000291
def: "." [Wikipedia:Palatine_tonsil]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Faucial tonsil" EXACT []
synonym: "faucial tonsil" EXACT []
synonym: "Palatine tonsil" EXACT []
xref: FMA:9610 ! Palatine tonsil
xref: HOG:0001140 ! palatine tonsil
xref: MA:0000775 ! palatine tonsil
xref: MAT:0000291 ! palatine tonsil
xref: MIAA:0000291 ! palatine tonsil
is_a: UBERON:0002372 ! tonsil
xref: ncithesaurus:Palatine_Tonsil ! Palatine Tonsil




[Term]
id: UBERON:0002375
name: cricoid cartilage
alt_id: UBERON:FMA_9615-MA_0001762
def: "." [Wikipedia:Cricoid_cartilage]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Cricoid cartilage" EXACT []
xref: AAO:0000675 ! cricoid_cartilage
xref: FMA:9615 ! Cricoid cartilage
xref: GAID:110 ! cricoid cartilage
xref: HOG:0001308 ! cricoid cartilage
xref: MA:0001762 ! cricoid cartilage
is_a: UBERON:0001739 ! laryngeal cartilage
xref: ncithesaurus:Cricoid_Cartilage ! Cricoid Cartilage

[Term]
id: UBERON:0002376
name: muscle of head
alt_id: UBERON:FMA_9616-MA_0000578-ZFA_0000328
def: "Muscle organ which is a part of the head. Examples: masseter, orbicularis oculi." []
comment: TODO - check ZFA
subset: uberon_slim
synonym: "cephalic musculature" EXACT []
synonym: "Head muscle" EXACT []
synonym: "head muscle" EXACT []
synonym: "head muscles" RELATED []
synonym: "Muscle of head" EXACT []
synonym: "Musculus caput" EXACT []
synonym: "musculus caput" EXACT []
xref: BTO:0000021
xref: FMA:9616 ! Muscle of head
xref: MA:0000578 ! head muscle
xref: TAO:0000328 ! cephalic musculature
xref: WBbt:0006761 ! head muscle
xref: ZFA:0000328 ! cephalic musculature
xref: ZFA:0001652 ! head muscle
is_a: UBERON:0001630 ! muscle organ
intersection_of: UBERON:0001630 ! muscle organ
intersection_of: part_of UBERON:0000033 ! head

[Term]
id: UBERON:0002377
name: muscle of neck
alt_id: UBERON:FMA_9617-MA_0000587
def: "Muscle organ which is a part of the neck. Examples: platysma, sternocleidomastoid, cricothyroid muscle." []
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Muscle of neck" EXACT []
synonym: "Neck muscle" EXACT []
synonym: "neck muscle" EXACT []
xref: FMA:9617 ! Muscle of neck
xref: GAID:149 ! neck muscle
xref: MA:0000587 ! neck muscle
is_a: UBERON:0001630 ! muscle organ
intersection_of: UBERON:0001630 ! muscle organ
intersection_of: part_of UBERON:0000974 ! neck
relationship: part_of UBERON:0000974 ! neck
xref: ncithesaurus:Neck_Muscle ! Neck Muscle

[Term]
id: UBERON:0002378
name: muscle of abdomen
alt_id: UBERON:FMA_9620-MA_0000520
def: "Muscle (organ) which is a part of the abdomen. Examples: external oblique, rectus abdominis." [Wikipedia:Abdominal_muscle]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "abdomen muscle" EXACT []
synonym: "Abdominal muscle" EXACT []
synonym: "abdominal muscle" EXACT []
synonym: "Abdominal wall muscle" EXACT []
synonym: "abdominal wall muscle" EXACT []
synonym: "Muscle of abdomen" EXACT []
xref: BTO:0001261
xref: FMA:9620 ! Muscle of abdomen
xref: GAID:89 ! abdominal muscle
xref: MA:0000520 ! abdomen muscle
is_a: UBERON:0001774 ! muscle of trunk
intersection_of: UBERON:0001630 ! muscle organ
intersection_of: part_of UBERON:0000916 ! abdomen
relationship: part_of UBERON:0000916 ! abdomen
xref: ncithesaurus:Abdominal_Muscle ! Abdominal Muscle

[Term]
id: UBERON:0002379
name: perineal muscle
alt_id: UBERON:FMA_9623-MA_0000538
comment: This class was created automatically from a combination of ontologies
synonym: "Muscle of perineum" EXACT []
synonym: "muscle of perineum" EXACT []
synonym: "Perineal muscle" EXACT []
xref: FMA:9623 ! Perineal muscle
xref: MA:0000538 ! perineal muscle
is_a: UBERON:0001325 ! muscle of pelvis
intersection_of: UBERON:0001630 ! muscle organ
intersection_of: part_of UBERON:0002356 ! perineum
xref: ncithesaurus:Perineal_Muscle ! Perineal Muscle

[Term]
id: UBERON:0002380
name: trapezius
alt_id: UBERON:FMA_9626-MA_0002398
def: "." [Wikipedia:Trapezius]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Trapezius" EXACT []
xref: FMA:9626 ! Trapezius
xref: HOG:0000834 ! trapezius
xref: MA:0002398 ! trapezius
is_a: UBERON:0001482 ! muscle of shoulder

[Term]
id: UBERON:0002381
name: pectoralis major
alt_id: UBERON:FMA_9627-MA_0002354
def: "." [Wikipedia:Pectoralis_major]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Pectoralis major" EXACT []
xref: EHDAA:8311 ! pectoralis major
xref: FMA:9627 ! Pectoralis major
xref: HOG:0000895 ! pectoralis major
xref: MA:0002354 ! pectoralis major
is_a: UBERON:0001495 ! pectoral muscle
xref: ncithesaurus:Pectoralis_Major ! Pectoralis Major

[Term]
id: UBERON:0002382
name: rectus abdominis
alt_id: UBERON:FMA_9628-MA_0002364
def: "." [Wikipedia:Rectus_abdominis]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Rectus abdominis" EXACT []
xref: EHDAA:8252 ! rectus abdominis
xref: FMA:9628 ! Rectus abdominis
xref: GAID:142 ! rectus abdominis
xref: HOG:0000863 ! rectus abdominis
xref: MA:0002364 ! rectus abdominis
is_a: UBERON:0002378 ! muscle of abdomen
xref: ncithesaurus:Rectus_Abdominis ! Rectus Abdominis

[Term]
id: UBERON:0002383
name: supraspinatus
alt_id: UBERON:FMA_9629-MA_0002389
def: "." [Wikipedia:Supraspinatus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Supraspinatus" EXACT []
xref: EHDAA:8319 ! supraspinatus
xref: FMA:9629 ! Supraspinatus
xref: HOG:0000848 ! supraspinatus
xref: MA:0002389 ! supraspinatus
is_a: UBERON:0001482 ! muscle of shoulder
xref: ncithesaurus:Supraspinatus ! Supraspinatus

[Term]
id: UBERON:0002384
name: connective tissue
alt_id: UBERON:FMA_9640-FMA_9721-MA_0000011-MA_0000115-MIAA_0000301-XAO_0000173-XAO_0001017
def: "Tissue which consists of fibroblasts, osteocytes or chondrocytes and intercellular matrix produced by these cells. Examples: bone (tissue), dense regular elastic tissue, areolar tissue, neuroglia, adipose tissue. // Anatomical entity consisting of tissue that is rich in extracellular matrix (collagen, proteoglycan, etc.) and binds together and is the support of the various structures of the body." [BTO:0000421, OMD:connective+tissue, Wikipedia:Connective_tissue]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Connective tissue" EXACT []
synonym: "fascia" RELATED []
synonym: "portion of connective tissue" EXACT []
synonym: "Textus connectivus" EXACT []
synonym: "textus connectivus" EXACT []
xref: AAO:0000098 ! connective_tissue
xref: BTO:0000421
xref: FMA:9640 ! Portion of connective tissue
xref: GAID:100 ! connective tissue
xref: galen:ConnectiveTissue
xref: MA:0000011 ! connective tissue
xref: MAT:0000301 ! connective tissue
xref: MIAA:0000301 ! connective tissue
xref: ncithesaurus:Connective_Tissue
xref: OpenCyc:Mx4rv-aBgZwpEbGdrcN5Y29ycA
xref: XAO:0001017 ! portion of connective tissue
is_a: UBERON:0000479 ! portion of tissue
xref: ZFA:0001632 ! portion of connective tissue

[Term]
id: UBERON:0002385
name: muscle tissue
alt_id: UBERON:FMA_9641-MA_0002437
def: "Tissue which consists of muscle cells surrounded by a reticulum of collagen fibers or fine connective tissue [endomysium]. Examples: Smooth muscle, Cardiac muscle." [Wikipedia:Muscle_tissue]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Muscle tissue" EXACT []
synonym: "Textus muscularis" EXACT []
synonym: "textus muscularis" EXACT []
xref: AAO:0000306 ! muscle_tissue
xref: FMA:9641 ! Portion of muscle tissue
xref: MA:0002437 ! muscle tissue
is_a: UBERON:0000479 ! portion of tissue
relationship: part_of UBERON:0001015 ! muscle system
xref: ncithesaurus:Muscle_Tissue ! Muscle Tissue

[Term]
id: UBERON:0002387
name: foot
alt_id: UBERON:FMA_9664-MA_0000044
def: "." [Wikipedia:Foot]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Foot" EXACT []
synonym: "Terminal segment of free lower limb" EXACT []
synonym: "terminal segment of free lower limb" EXACT []
xref: BTO:0000476
xref: FMA:9664 ! Foot
xref: GAID:40 ! foot
xref: galen:Foot
xref: MA:0000044 ! foot
xref: OpenCyc:Mx4rvVi-k5wpEbGdrcN5Y29ycA
is_a: UBERON:0002470 ! autopod
relationship: part_of UBERON:0002103 ! hindlimb
intersection_of: UBERON:0002470 ! autopod
intersection_of: part_of UBERON:0002103 ! hindlimb
xref: ncithesaurus:Foot ! Foot

[Term]
id: UBERON:0002388
name: ankle
alt_id: UBERON:FMA_9665-MA_0000043
def: "." [Wikipedia:Ankle]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Ankle" EXACT []
xref: FMA:9665 ! Ankle
xref: GAID:41 ! ankle
xref: galen:Ankle
xref: MA:0000043 ! ankle
xref: OpenCyc:Mx4rvVi-R5wpEbGdrcN5Y29ycA
is_a: UBERON:0002529 ! limb segment
relationship: part_of UBERON:0002103 ! hindlimb

[Term]
id: UBERON:0002389
name: finger
alt_id: UBERON:FMA_9666-MA_0000041
def: "Subdivision of the hand demarcated from the hand proper by the skin crease in line with the distal edge of finger webs. Examples: thumb, right middle finger, left little finger [FMA]. A digit found on the hands of humans and other primates used for manipulation and sensation [Wikipedia]." [Wikipedia:Finger]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Digit of hand" EXACT []
synonym: "digit of hand" EXACT []
synonym: "Digitus manus" EXACT []
synonym: "digitus manus" EXACT []
synonym: "Finger" EXACT []
synonym: "hand digit" EXACT []
xref: FMA:9666 ! Finger
xref: GAID:57 ! finger
xref: galen:Finger
xref: MA:0000041 ! hand digit
xref: OpenCyc:Mx4rvVi_f5wpEbGdrcN5Y29ycA
is_a: UBERON:0000028 ! fore digit
intersection_of: UBERON:0002544 ! digit
intersection_of: part_of UBERON:0002398 ! hand
relationship: part_of UBERON:0002398 ! hand
xref: ncithesaurus:Finger ! Finger

[Term]
id: UBERON:0002390
name: hematopoietic system
alt_id: UBERON:FMA_9667-MA_0002434-MIAA_0000022-XAO_0000122-ZFA_0005023
def: "Anatomical system that consists of the blood and blood forming tissues." [OMD:haematological, Wikipedia:Hematopoietic_system]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "haematological system" EXACT []
synonym: "haematopoietic system" RELATED []
synonym: "haemopoietic system" EXACT []
synonym: "hematological system" RELATED []
synonym: "hematolymphoid system" RELATED []
synonym: "Hematopoietic system" EXACT []
synonym: "Hemopoietic system" EXACT []
synonym: "hemopoietic system" RELATED []
synonym: "Organa haemopoietica" EXACT []
synonym: "organa haemopoietica" EXACT []
xref: BTO:0000570
xref: EFO:0000798 ! haemopoietic system
xref: FMA:9667 ! Hematopoietic system
xref: GAID:1008 ! hematopoietic system
xref: HOG:0001624 ! hematopoietic system
xref: MA:0002434 ! hematopoietic system
xref: MAT:0000022 ! haemopoietic system
xref: MIAA:0000022 ! haemopoietic system
xref: TAO:0005023 ! hematopoietic system
xref: XAO:0000122 ! hematological system
xref: ZFA:0005023 ! hematopoietic system
is_a: UBERON:0000467 ! anatomical system
disjoint_from: UBERON:0000075 ! subdivision of skeleton
disjoint_from: UBERON:0000949 ! endocrine system
disjoint_from: UBERON:0000990 ! reproductive system
disjoint_from: UBERON:0001004 ! respiratory system
disjoint_from: UBERON:0001007 ! digestive system
disjoint_from: UBERON:0001008 ! urinary system
disjoint_from: UBERON:0001009 ! circulatory system
disjoint_from: UBERON:0001016 ! nervous system
disjoint_from: UBERON:0001032 ! sense organ system
disjoint_from: UBERON:0001033 ! gustatory system
disjoint_from: UBERON:0001434 ! skeleton
disjoint_from: UBERON:0002204 ! musculoskeletal system
disjoint_from: UBERON:0002294 ! biliary system
disjoint_from: UBERON:0002330 ! exocrine system
disjoint_from: UBERON:0002405 ! immune system
disjoint_from: UBERON:0002416 ! integumental system
disjoint_from: UBERON:0002423 ! hepatobiliary system
relationship: part_of UBERON:0002193 ! hemolymphoid system
xref: ncithesaurus:Hematopoietic_System ! Hematopoietic System

[Term]
id: UBERON:0002391
name: lymph
alt_id: UBERON:FMA_9671-MA_0002520-MIAA_0000055
def: "Transudate contained in the lumen of lymphatic vessel (FMA). Lymph is the fluid that is formed when interstitial fluid enters the conduits of the lymphatic system (wikipedia)." [Wikipedia:Lymph]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Lymph" EXACT []
xref: BTO:0000855
xref: EFO:0000871 ! lymph
xref: ENVO:02000041
xref: FMA:9671 ! Lymph
xref: GAID:1186 ! lymph
xref: MA:0002520 ! lymph
xref: MAT:0000055 ! lymph
xref: MIAA:0000055 ! lymph
is_a: UBERON:0000179 ! haemolymphatic fluid
relationship: develops_from UBERON:0000913 ! interstitial fluid
xref: ncithesaurus:Lymph ! Lymph

[Term]
id: UBERON:0002392
name: nasolacrimal duct
alt_id: UBERON:FMA_9703-MA_0001299
def: "." [Wikipedia:Nasolacrimal_duct]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Nasolacrimal duct" EXACT []
xref: EHDAA:7849 ! nasolacrimal duct
xref: EHDAA:9094 ! nasolacrimal duct
xref: FMA:9703 ! Nasolacrimal duct
xref: GAID:902 ! nasolacrimal duct
xref: MA:0001299 ! nasolacrimal duct
xref: OpenCyc:Mx4rv6PJy5wpEbGdrcN5Y29ycA
is_a: UBERON:0000058 ! duct
relationship: part_of UBERON:0001850 ! lacrimal duct
xref: ncithesaurus:Nasolacrimal_Duct ! Nasolacrimal Duct

[Term]
id: UBERON:0002393
name: pharyngotympanic tube
alt_id: UBERON:FMA_9705-MA_0000255-XAO_0000213
def: "Organ with organ cavity which connects the cavity of the middle ear to the cavity of the pharynx. Examples: There are only two pharyngotympanic tubes, the right and the left pharyngotympanic tubes." [Wikipedia:Pharyngotympanic_tube]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Auditory tube" EXACT []
synonym: "auditory tube" EXACT []
synonym: "Eustachian tube" EXACT []
synonym: "eustachian tube" RELATED []
synonym: "Internal auditory tube" EXACT []
synonym: "internal auditory tube" EXACT []
synonym: "Pharyngotympanic tube" EXACT []
xref: FMA:9705 ! Pharyngotympanic tube
xref: GAID:869 ! eustachian tube
xref: HOG:0001145 ! auditory tube
xref: MA:0000255 ! auditory tube
xref: XAO:0000213 ! auditory tube
is_a: UBERON:0000062 ! organ
relationship: part_of UBERON:0001756 ! middle ear
xref: ncithesaurus:Eustachian_Tube ! Eustachian Tube

[Term]
id: UBERON:0002394
name: bile duct
alt_id: UBERON:FMA_9706-MA_0000354-XAO_0000134
def: "Duct that carries bile from the liver to the small intestine." [Wikipedia:Bile_duct, ZFA:0001100]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Bile duct" EXACT []
synonym: "Biliary duct" EXACT []
synonym: "biliary duct" EXACT []
synonym: "hepatic duct" RELATED []
xref: BTO:0000122
xref: FMA:9706 ! Bile duct
xref: GAID:280 ! bile duct
xref: HOG:0000212 ! bile duct
xref: MA:0000354 ! bile duct
xref: ncithesaurus:Bile_Duct
xref: OpenCyc:Mx4rvdCds5wpEbGdrcN5Y29ycA
xref: XAO:0000134 ! bile duct
is_a: UBERON:0000058 ! duct
intersection_of: UBERON:0000058 ! duct
intersection_of: transports UBERON:0001970 ! bile
relationship: part_of UBERON:0000916 ! abdomen
relationship: part_of UBERON:0002294 ! biliary system

[Term]
id: UBERON:0002395
name: talus
alt_id: UBERON:FMA_9708-MA_0001351
def: "." [Wikipedia:Talus]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "astragalus" RELATED []
synonym: "Talus" EXACT []
xref: FMA:9708 ! Talus
xref: GAID:196 ! talus
xref: MA:0001351 ! talus
is_a: UBERON:0001447 ! tarsal bone
xref: ncithesaurus:Talus ! Talus
xref: BTO:0002354 ! talus

[Term]
id: UBERON:0002396
name: vomer
alt_id: UBERON:FMA_9710-MA_0001496
def: "." [Wikipedia:Vomer]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Vomer" EXACT []
synonym: "Vomer bone" EXACT []
synonym: "vomer bone" EXACT []
xref: AAO:0000633 ! vomer
xref: FMA:9710 ! Vomer
xref: MA:0001496 ! vomer bone
xref: OpenCyc:Mx4rv6jKWZwpEbGdrcN5Y29ycA
xref: ZFA:0000308 ! prevomer
is_a: UBERON:0000062 ! organ
relationship: part_of UBERON:0001704 ! viscerocranium
xref: ncithesaurus:Vomer ! Vomer

[Term]
id: UBERON:0002397
name: maxilla
alt_id: UBERON:FMA_9711-MA_0001491-ZFA_0000270
def: "The dermal maxilla forms part of the upper jaw. It is first visible as a small dorsoventrally oriented rod of bone in the lateral region of the upper jaw. Through anterior ossification it becomes S-shaped, with its anteriormost tip directed medially (4.8 mm NL). The posteroventral end of the maxilla is connected to the dentary by a ligament. Maxillary teeth are absent in cypriniforms, but are present in other ostariophysans. . Two barbels are present on the maxilla. The presence of two pairs of maxillary barbels is considered by Cavender and Coburn (1992) to be the primitive condition for the Cyprinidae." [Wikipedia:Maxilla, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Maxilla" EXACT []
synonym: "maxillae" RELATED []
synonym: "Upper jaw bone" EXACT []
synonym: "upper jaw bone" EXACT []
xref: AAO:0000285 ! maxilla
xref: EHDAA:8043 ! maxilla
xref: FMA:9711 ! Maxilla
xref: GAID:220 ! maxilla
xref: HAO:0000513 ! maxilla
xref: HOG:0001021 ! maxilla
xref: MA:0001491 ! maxilla
xref: TAO:0000270 ! maxilla
xref: ZFA:0000270 ! maxilla
is_a: UBERON:0002514 ! intramembranous bone
intersection_of: UBERON:0001474 ! bone
intersection_of: part_of UBERON:0001709 ! upper jaw
relationship: part_of UBERON:0001709 ! upper jaw
xref: ncithesaurus:Maxilla ! Maxilla

[Term]
id: UBERON:0002398
name: hand
alt_id: UBERON:FMA_9712-MA_0000037
def: "." [Wikipedia:Hand]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Hand" EXACT []
synonym: "Terminal segment of free upper limb" EXACT []
synonym: "terminal segment of free upper limb" EXACT []
xref: FMA:9712 ! Hand
xref: GAID:56 ! hand
xref: galen:Hand
xref: MA:0000037 ! hand
xref: OpenCyc:Mx4rvViGVZwpEbGdrcN5Y29ycA
is_a: UBERON:0002470 ! autopod
relationship: part_of UBERON:0001460 ! arm
intersection_of: UBERON:0002470 ! autopod
intersection_of: part_of UBERON:0001460 ! arm
xref: ncithesaurus:Hand ! Hand

[Term]
id: UBERON:0002399
name: lesser omentum
alt_id: UBERON:FMA_9715-MA_0001623
def: "." [Wikipedia:Lesser_omentum]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Lesser omentum" EXACT []
xref: EHDAA:4858 ! lesser omentum
xref: FMA:9715 ! Lesser omentum
xref: HOG:0000357 ! lesser omentum
xref: MA:0001623 ! lesser omentum
is_a: UBERON:0000063 ! organ segment
relationship: part_of UBERON:0001178 ! visceral peritoneum
xref: ncithesaurus:Lesser_Omentum ! Lesser Omentum

[Term]
id: UBERON:0002400
name: parietal pleura
alt_id: UBERON:FMA_9733-MA_0002488
def: "Parietal serous membrane which is continuous with the visceral pleura and is attached to the dome of the diaphragm." [Wikipedia:Parietal_pleura]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Parietal pleura" EXACT []
xref: FMA:9733 ! Parietal pleura
xref: HOG:0001495 ! parietal pleura
xref: MA:0002488 ! parietal pleura
is_a: UBERON:0000042 ! serous membrane
relationship: part_of UBERON:0000977 ! mesothoracic pleurum
xref: ncithesaurus:Parietal_Pleura ! Parietal Pleura

[Term]
id: UBERON:0002401
name: visceral pleura
alt_id: UBERON:FMA_9734-MA_0002489
def: "Visceral serous membrane which is continuous with the parietal pleura and is attached to the parenchyma of lobe of lung." [Wikipedia:Visceral_pleura]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Pleura visceralis (pulmonalis)" EXACT []
synonym: "pleura visceralis (pulmonalis)" EXACT []
synonym: "Pulmonary pleura" EXACT []
synonym: "pulmonary pleura" EXACT []
synonym: "Visceral pleura" EXACT []
xref: FMA:9734 ! Visceral pleura
xref: MA:0002489 ! visceral pleura
is_a: UBERON:0000042 ! serous membrane
relationship: part_of UBERON:0000977 ! mesothoracic pleurum
xref: ncithesaurus:Visceral_Pleura ! Visceral Pleura

[Term]
id: UBERON:0002402
name: pleural cavity
alt_id: UBERON:FMA_9740-MA_0000055
def: "Cavity of serous sac surropunded by the pleura." [Wikipedia:Pleural_cavity]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Pleural cavity" EXACT []
xref: FMA:9740 ! Pleural cavity
xref: GAID:95 ! pleural cavity
xref: HOG:0000581 ! pleural cavity
xref: MA:0000055 ! pleural cavity
is_a: UBERON:0002323 ! body cavity
xref: ncithesaurus:Pleural_Cavity ! Pleural Cavity

[Term]
id: UBERON:0002403
name: internal intercostal muscle
alt_id: UBERON:FMA_9757-MA_0002326
def: "." [Wikipedia:Internal_intercostal_muscle]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "intercostal muscle internal layer" RELATED []
synonym: "intercostales internus" EXACT []
synonym: "Internal intercostal muscle" EXACT []
xref: FMA:9757 ! Internal intercostal muscle
xref: HOG:0000905 ! intercostales internus
xref: MA:0002326 ! intercostales internus
is_a: UBERON:0001111 ! intercostal muscle
xref: ncithesaurus:Internal_Intercostal_Muscle ! Internal Intercostal Muscle

[Term]
id: UBERON:0002404
name: transversus thoracis
alt_id: UBERON:FMA_9760-MA_0002397
def: "." [Wikipedia:Transversus_thoracis]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Transversus thoracis" EXACT []
xref: FMA:9760 ! Transversus thoracis
xref: MA:0002397 ! transversus thoracis
is_a: UBERON:0002426 ! chest muscle
xref: ncithesaurus:Transversus_Thoracis ! Transversus Thoracis

[Term]
id: UBERON:0002405
name: immune system
alt_id: UBERON:FMA_9825-MA_0002711-XAO_0003152-ZFA_0001159
def: "Anatomical system that protects the body from foreign substances, cells, and tissues by producing the immune response and that includes especially the thymus, spleen, lymphoid tissue, lymphocytes including the B cells and T cells, and antibodies." [NLM:immune+system, Wikipedia:Immune_system]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Immune system" EXACT []
xref: BILA:0000104
xref: FMA:9825 ! Immune system
xref: GAID:328 ! immune system
xref: HOG:0001247 ! immune system
xref: MA:0002711 ! immune system
xref: OpenCyc:Mx4rvWNkm5wpEbGdrcN5Y29ycA
xref: TAO:0001159 ! immune system
xref: XAO:0003152 ! immune system
xref: ZFA:0001159 ! immune system
is_a: UBERON:0000467 ! anatomical system
disjoint_from: UBERON:0000075 ! subdivision of skeleton
disjoint_from: UBERON:0000949 ! endocrine system
disjoint_from: UBERON:0000990 ! reproductive system
disjoint_from: UBERON:0001004 ! respiratory system
disjoint_from: UBERON:0001007 ! digestive system
disjoint_from: UBERON:0001008 ! urinary system
disjoint_from: UBERON:0001009 ! circulatory system
disjoint_from: UBERON:0001016 ! nervous system
disjoint_from: UBERON:0001032 ! sense organ system
disjoint_from: UBERON:0001033 ! gustatory system
disjoint_from: UBERON:0001434 ! skeleton
disjoint_from: UBERON:0002204 ! musculoskeletal system
disjoint_from: UBERON:0002294 ! biliary system
disjoint_from: UBERON:0002330 ! exocrine system
disjoint_from: UBERON:0002390 ! hematopoietic system
disjoint_from: UBERON:0002416 ! integumental system
disjoint_from: UBERON:0002423 ! hepatobiliary system
xref: ncithesaurus:Immune_System ! Immune System

[Term]
id: UBERON:0002406
name: pericardial sac
alt_id: UBERON:FMA_9868-ZFA_0000054
def: "Serous sac, which has as parts the serous pericardium and the pericardial cavity . Examples: There is only one pericardial sac." [Wikipedia:Pericardial_sac]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Pericardial sac" EXACT []
synonym: "pericardium" RELATED []
xref: FMA:9868 ! Pericardial sac
xref: TAO:0000054 ! pericardial sac
xref: ZFA:0000054 ! pericardium
is_a: UBERON:0000062 ! organ
relationship: part_of UBERON:0001009 ! circulatory system
relationship: part_of UBERON:0002407 ! pericardium

[Term]
id: UBERON:0002407
name: pericardium
alt_id: UBERON:FMA_9869-MA_0000099
def: "Organ cluster which has as its parts the fibrous pericardium and the pericardial sac." [Wikipedia:Pericardium]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Pericardium" EXACT []
xref: BTO:0000717
xref: EFO:0000820 ! pericardium
xref: EHDAA:5376 ! pericardium
xref: FMA:9869 ! Pericardium
xref: GAID:569 ! pericardium
xref: HOG:0001280 ! pericardium
xref: MA:0000099 ! pericardium
xref: MAT:0000454 ! pericardium
is_a: UBERON:0000477 ! anatomical cluster
xref: ncithesaurus:Pericardium ! Pericardium

[Term]
id: UBERON:0002408
name: parietal serous pericardium
alt_id: UBERON:FMA_9870-MA_0000483
def: "Parietal serous membrane which is continuous with the visceral serous pericardium and is attached to the central tendon of diaphragm." [Wikipedia:Parietal_pericardium]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Lamina parietalis (pericardii serosum)" EXACT []
synonym: "lamina parietalis (pericardii serosum)" EXACT []
synonym: "Parietal layer of serous pericardium" EXACT []
synonym: "parietal layer of serous pericardium" EXACT []
synonym: "Parietal pericardium" EXACT []
synonym: "parietal pericardium" EXACT []
synonym: "Parietal serous pericardium" EXACT []
xref: EHDAA:3422 ! parietal pericardium
xref: EHDAA:5378 ! parietal pericardium
xref: FMA:9870 ! Parietal serous pericardium
xref: HOG:0000537 ! parietal pericardium
xref: MA:0000483 ! parietal serous pericardium
is_a: UBERON:0000042 ! serous membrane
relationship: part_of UBERON:0002357 ! serous pericardium

[Term]
id: UBERON:0002409
name: pericardial fluid
alt_id: UBERON:FMA_9887-MA_0002530
def: "Transudate contained in the pericardial cavity." [Wikipedia:Pericardial_fluid]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Pericardial fluid" EXACT []
xref: BTO:0001016
xref: FMA:9887 ! Pericardial fluid
xref: MA:0002530 ! pericardial fluid
is_a: UBERON:0000463 ! portion of organism substance

[Term]
id: UBERON:0002410
name: autonomic nervous system
alt_id: UBERON:FMA_9905-MA_0000219-ZFA_0001574
def: "The autonomic nervous system is composed of neurons that are not under conscious control, and is comprised of two antagonistic components, the sympathetic and parasympathetic nervous systems. The autonomic nervous system regulates key functions including the activity of the cardiac (heart) muscle, smooth muscles (e.g. of the gut), and glands[GO]." [Wikipedia:Autonomic_nervous_system]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "ANS" RELATED []
synonym: "Autonomic nervous system" EXACT []
synonym: "Visceral nervous system" EXACT []
synonym: "visceral nervous system" EXACT []
xref: AAO:0000033 ! autonomic_nervous_system
xref: EHDA:10095 ! autonomic
xref: FMA:9905 ! Autonomic nervous system
xref: GAID:706 ! autonomic nervous system
xref: HOG:0000396 ! autonomic nervous system
xref: MA:0000219 ! autonomic nervous system
xref: NIF_GrossAnatomy:birnlex_1123 ! Autonomic nervous system
xref: TAO:0001574 ! autonomic nervous system
xref: ZFA:0001574 ! autonomic nervous system
is_a: UBERON:0000073 ! regional part of nervous system
relationship: part_of UBERON:0001016 ! nervous system
xref: ncithesaurus:Autonomic_Nervous_System ! Autonomic Nervous System
xref: BTO:0002507 ! autonomic nervous system

[Term]
id: UBERON:0002411
name: clitoris
alt_id: UBERON:FMA_9909-MA_0000382
def: "." [Wikipedia:Clitoris]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Clitoris" EXACT []
xref: FMA:9909 ! Clitoris
xref: GAID:385 ! clitoris
xref: galen:Clitoris
xref: HOG:0000700 ! clitoris
xref: MA:0000382 ! clitoris
xref: ncithesaurus:Clitoris
xref: OpenCyc:Mx4rvVjr6ZwpEbGdrcN5Y29ycA
is_a: UBERON:0000475 ! organism subdivision
relationship: part_of UBERON:0000997 ! vulva
xref: BTO:0002020 ! clitoris

[Term]
id: UBERON:0002412
name: vertebra
alt_id: UBERON:FMA_9914-MA_0000309-ZFA_0001189
def: "Irregular bone that articulates with other vertebrae, or with one other vertebra and the skull or the sacrum // All serially repeated ossified, cartilaginous, and ligamentous elements around the notochord (Schultze and Arratia, 1988)." [Wikipedia:Vertebra, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Vertebra" EXACT []
xref: AAO:0000691 ! vertebra
xref: FMA:9914 ! Vertebra
xref: HOG:0001143 ! vertebra
xref: MA:0000309 ! vertebra
xref: TAO:0001189 ! vertebra
xref: ZFA:0001189 ! vertebra
is_a: UBERON:0002513 ! endochondral bone
relationship: part_of UBERON:0001130 ! vertebral column
xref: ncithesaurus:Vertebra ! Vertebra

[Term]
id: UBERON:0002413
name: cervical vertebra
alt_id: UBERON:FMA_9915-MA_0000311-XAO_0003076
def: "." [Wikipedia:Cervical_vertebra]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Cervical vertebra" EXACT []
xref: FMA:9915 ! Cervical vertebra
xref: GAID:235 ! cervical vertebrae
xref: galen:CervicalVertebra
xref: MA:0000311 ! cervical vertebra
xref: XAO:0003076 ! cervical vertebra
is_a: UBERON:0002412 ! vertebra
relationship: part_of UBERON:0000974 ! neck
xref: ncithesaurus:Cervical_Vertebra ! Cervical Vertebra

[Term]
id: UBERON:0002414
name: lumbar vertebra
alt_id: UBERON:FMA_9921-MA_0000312
def: "Large vertebra of the movable part of the vertebral column, characterized by the absence of the foramen transversarium within the transverse process, and by the absence of facets on the sides of the body." [Wikipedia:Lumbar_vertebra]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Lumbar vertebra" EXACT []
xref: FMA:9921 ! Lumbar vertebra
xref: GAID:240 ! lumbar vertebrae
xref: MA:0000312 ! lumbar vertebra
xref: OpenCyc:Mx4rvaOek5wpEbGdrcN5Y29ycA
is_a: UBERON:0002412 ! vertebra
xref: ncithesaurus:Lumbar_Vertebra ! Lumbar Vertebra

[Term]
id: UBERON:0002415
name: tail
alt_id: UBERON:MA_0000008-MIAA_0000094-WBbt_0005741-XAO_0003026-ZFA_0001117
def: "posterior region, from rectum to the end // Organism subdivision that is the terminal, flexible posterior appendage of the larva. It is resorbed during metamorphosis beginning with degeneration of the notochord's distal tip at NF stage 61, followed by degeneration gradually extending to its more proximal regions and reaching its proximal end by NF stage 62. By NF stage 66 it exists only as a small dorsal swelling. // Organism subdivision which is the part of the body posterior to the vent which includes the anal and caudal fins." [ISBN:0471209627, OMD:tail, WB:rynl, Wikipedia:Tail, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "post-vent region" EXACT []
xref: BILA:0000117
xref: BTO:0001348
xref: EHDAA:9198 ! tail
xref: GAID:1245 ! tail
xref: MA:0000008 ! tail
xref: MAT:0000094 ! tail
xref: MIAA:0000094 ! tail
xref: OpenCyc:Mx4rvVjiC5wpEbGdrcN5Y29ycA
xref: TAO:0001117 ! post-vent region
xref: WBbt:0005741 ! tail
xref: XAO:0003026 ! tail
xref: ZFA:0001117 ! post-vent region
is_a: UBERON:0000475 ! organism subdivision

[Term]
id: UBERON:0002416
name: integumental system
alt_id: UBERON:MA_0000014-FMA_72979
def: "organ system that protects the body from damage, comprising the skin and its appendages[1](including hair, scales, and nails). The integumentary system has a variety of functions; it may serve to waterproof, cushion and protect the deeper tissues, excrete wastes, regulate temperature and is the location of receptors for pain, sensation, pressure and temperature. In humans the integumentary system additionally provides vitamin D synthesis." [Wikipedia:Integumentary_system]
synonym: "Integumental system" EXACT [FMA:72979]
xref: EFO:0000807 ! integumental system
xref: EHDAA:6520 ! integumental system
xref: FMA:72979 ! Integumentary system
xref: HOG:0000403 ! integumental system
xref: MA:0000014 ! integumental system
xref: MAT:0000033 ! integumental system
is_a: UBERON:0000467 ! anatomical system
disjoint_from: UBERON:0000075 ! subdivision of skeleton
disjoint_from: UBERON:0000949 ! endocrine system
disjoint_from: UBERON:0000990 ! reproductive system
disjoint_from: UBERON:0001004 ! respiratory system
disjoint_from: UBERON:0001007 ! digestive system
disjoint_from: UBERON:0001008 ! urinary system
disjoint_from: UBERON:0001009 ! circulatory system
disjoint_from: UBERON:0001016 ! nervous system
disjoint_from: UBERON:0001032 ! sense organ system
disjoint_from: UBERON:0001033 ! gustatory system
disjoint_from: UBERON:0001434 ! skeleton
disjoint_from: UBERON:0002204 ! musculoskeletal system
disjoint_from: UBERON:0002294 ! biliary system
disjoint_from: UBERON:0002330 ! exocrine system
disjoint_from: UBERON:0002390 ! hematopoietic system
disjoint_from: UBERON:0002405 ! immune system
disjoint_from: UBERON:0002423 ! hepatobiliary system
relationship: develops_from UBERON:0000926 ! mesoderm

[Term]
id: UBERON:0002417
name: abdominal segment of trunk
alt_id: UBERON:MA_0000021-FMA_259211
synonym: "abdomen/pelvis/perineum" RELATED [MA:0000021]
synonym: "lower body" RELATED [MA:0000021]
xref: FMA:259211 ! Abdominal segment of trunk
xref: MA:0000021 ! abdominal segment of trunk
is_a: UBERON:0000475 ! organism subdivision
relationship: part_of UBERON:0002100 ! trunk

[Term]
id: UBERON:0002418
name: cartilage
alt_id: UBERON:MA_0000104-MIAA_0000189-XAO_0000170
def: "a portion of connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate[GO]." [Wikipedia:Cartilage]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
xref: AAO:0000060 ! cartilage
xref: BTO:0000206
xref: GAID:99 ! cartilage
xref: galen:Cartilage
xref: HOG:0001207 ! cartilage
xref: MA:0000104 ! cartilage
xref: MAT:0000189 ! cartilage
xref: MIAA:0000189 ! cartilage
xref: ncithesaurus:Cartilage
xref: OpenCyc:Mx4rvVjeOZwpEbGdrcN5Y29ycA
xref: TAO:0001501 ! cartilage
xref: XAO:0000170 ! cartilage
xref: ZFA:0001501 ! cartilage
is_a: UBERON:0000479 ! portion of tissue
relationship: part_of UBERON:0002204 ! musculoskeletal system
xref: FMA:71500 ! Set of cartilages

[Term]
id: UBERON:0002419
name: skin gland
alt_id: UBERON:MA_0000146-FMA_71878
synonym: "Skin glands" EXACT [FMA:71878]
synonym: "skin glands" EXACT []
synonym: "Skin glands set" EXACT [FMA:71878]
synonym: "skin glands set" EXACT []
xref: FMA:71878 ! Set of skin glands
xref: MA:0000146 ! skin gland
is_a: UBERON:0000061 ! anatomical structure
is_a: UBERON:0002530 ! gland
relationship: part_of UBERON:0002097 ! skin

[Term]
id: UBERON:0002420
name: basal ganglia
def: "group of nuclei in the brains of vertebrates, situated at the base of the forebrain and strongly connected with the cerebral cortex, thalamus and other areas.ganglion in the head. The main components of the basal ganglia are the striatum, pallidum, substantia nigra, and subthalamic nucleus[WP]. Subcortical masses of gray matter in the forebrain and midbrain that are richly interconnected and so viewed as a functional system. The nuclei usually included are the caudate nucleus (caudoputamen in rodents), putamen, globus pallidus, substantia nigra (pars compacta and pars reticulata) and the subthalamic nucleus. Some also include the nucleus accumbens and ventral pallidum[NIF]." [Wikipedia:Basal_ganglia]
comment: FMA also has singular - FMA:62514
subset: uberon_slim
synonym: "basal ganglion" RELATED []
synonym: "basal nucleus" RELATED []
synonym: "basasl nucleus" BROAD []
xref: FMA:84013 ! Set of basal ganglia
xref: GAID:617 ! basal ganglia
xref: MA:0000184 ! basal ganglia
xref: NIF_GrossAnatomy:birnlex_826 ! Basal ganglia
is_a: UBERON:0000045 ! ganglion
relationship: part_of UBERON:0001893 ! telencephalon
xref: ncithesaurus:Basal_Ganglia ! Basal Ganglia

[Term]
id: UBERON:0002421
name: hippocampal formation
alt_id: UBERON:MA_0000189-FMA_74038
def: "." [Wikipedia:Hippocampal_formation]
subset: uberon_slim
synonym: "archipallium" RELATED [MA:0000189]
synonym: "Hippocampus (Crosby)" EXACT [FMA:74038]
synonym: "hippocampus (crosby)" EXACT []
synonym: "primal cortex" RELATED [MA:0000189]
xref: FMA:74038 ! Hippocampal formation
xref: MA:0000189 ! hippocampal formation
is_a: UBERON:0000477 ! anatomical cluster
relationship: part_of UBERON:0001893 ! telencephalon

[Term]
id: UBERON:0002422
name: fourth ventricle
alt_id: UBERON:MA_0000196-FMA_78469
def: "The fourth ventricle is an irregularly shaped cavity in the rhombencephalon, between the medulla oblongata, the pons, and the isthmus in front, and the cerebellum behind. It is continuous with the central canal of the cord below and with the cerebral aqueduct above, and through its lateral and median apertures it communicates with the subarachnoid space[GO]." [Wikipedia:Fourth_ventricle]
subset: uberon_slim
synonym: "4th ventricle" RELATED [MA:0000196]
xref: FMA:78469 ! Fourth ventricle
xref: HOG:0000006 ! fourth ventricle
xref: MA:0000196 ! fourth ventricle
xref: OpenCyc:Mx4rv-7Q6pwpEbGdrcN5Y29ycA
xref: ZFA:0000110 ! fourth ventricle
is_a: UBERON:0002300 ! ventricle
relationship: part_of UBERON:0002028 ! hindbrain
xref: ncithesaurus:Fourth_Ventricle_of_the_Brain ! Fourth Ventricle
xref: BTO:0003426 ! fourth ventricle

[Term]
id: UBERON:0002423
name: hepatobiliary system
alt_id: UBERON:MA_0000324-MIAA_0000024-XAO_0000132-ZFA_0000036
def: "." [Wikipedia:Hepatobiliary_system]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "liver and biliary system" EXACT []
synonym: "liver/biliary system" RELATED []
xref: EFO:0000800 ! liver and biliary system
xref: EHDAA:2189 ! liver and biliary system
xref: HOG:0000294 ! liver and biliary system
xref: MA:0000324 ! hepatobiliary system
xref: MAT:0000024 ! liver and biliary system
xref: MIAA:0000024 ! liver and biliary system
xref: TAO:0000036 ! liver and biliary system
xref: XAO:0000132 ! liver and biliary system
xref: ZFA:0000036 ! liver and biliary system
is_a: UBERON:0000467 ! anatomical system
disjoint_from: UBERON:0000075 ! subdivision of skeleton
disjoint_from: UBERON:0000949 ! endocrine system
disjoint_from: UBERON:0000990 ! reproductive system
disjoint_from: UBERON:0001004 ! respiratory system
disjoint_from: UBERON:0001007 ! digestive system
disjoint_from: UBERON:0001008 ! urinary system
disjoint_from: UBERON:0001009 ! circulatory system
disjoint_from: UBERON:0001016 ! nervous system
disjoint_from: UBERON:0001032 ! sense organ system
disjoint_from: UBERON:0001033 ! gustatory system
disjoint_from: UBERON:0001434 ! skeleton
disjoint_from: UBERON:0002204 ! musculoskeletal system
disjoint_from: UBERON:0002294 ! biliary system
disjoint_from: UBERON:0002330 ! exocrine system
disjoint_from: UBERON:0002390 ! hematopoietic system
disjoint_from: UBERON:0002405 ! immune system
disjoint_from: UBERON:0002416 ! integumental system
relationship: part_of UBERON:0001007 ! digestive system
xref: ncithesaurus:Hepatobiliary_System ! Hepatobiliary System

[Term]
id: UBERON:0002424
name: oral epithelium
alt_id: UBERON:MA_0000344-ZFA_0000816
xref: EHDAA:2187 ! oral epithelium
xref: HOG:0000187 ! oral epithelium
xref: MA:0000344 ! oral epithelium
xref: ZFA:0000816 ! oral epithelium
is_a: UBERON:0000483 ! epithelium
relationship: part_of UBERON:0000166 ! oral opening
xref: BTO:0001775 ! oral epithelium

[Term]
id: UBERON:0002425
name: visceral serous pericardium
alt_id: UBERON:MA_0000484-FMA_84882
def: "." [Wikipedia:Visceral_pericardium]
subset: uberon_slim
synonym: "epicardium" RELATED [MA:0000484]
synonym: "Visceral lamina of serous pericardium" EXACT [FMA:84882]
synonym: "visceral lamina of serous pericardium" EXACT []
synonym: "Visceral layer of serous pericardium" EXACT [FMA:84882]
synonym: "visceral layer of serous pericardium" EXACT []
synonym: "Visceral pericardium" EXACT [FMA:84882]
synonym: "visceral pericardium" EXACT []
xref: FMA:84882 ! Visceral serous pericardium
xref: HOG:0000538 ! visceral pericardium
xref: MA:0000484 ! visceral serous pericardium
is_a: UBERON:0002357 ! serous pericardium
relationship: attached_to UBERON:0002349 ! myocardium

[Term]
id: UBERON:0002426
name: chest muscle
alt_id: UBERON:MA_0000548-FMA_9619
synonym: "Chest muscle" EXACT [FMA:9619]
synonym: "Musculus thoracicus" EXACT [FMA:9619]
synonym: "musculus thoracicus" EXACT []
synonym: "Thoracic muscle" EXACT [FMA:9619]
synonym: "thoracic muscle" EXACT []
xref: FMA:9619 ! Muscle of thorax
xref: MA:0000548 ! chest muscle
is_a: UBERON:0001774 ! muscle of trunk
intersection_of: UBERON:0001630 ! muscle organ
intersection_of: part_of UBERON:0001443 ! chest
relationship: part_of UBERON:0001443 ! chest

[Term]
id: UBERON:0002427
name: arm skin
alt_id: UBERON:MA_0000596-FMA_37721
synonym: "Arm skin" EXACT [FMA:37721]
xref: FMA:37721 ! Skin of arm
xref: MA:0000596 ! arm skin
is_a: UBERON:0001419 ! skin of limb
is_a: UBERON:0002097 ! skin
intersection_of: UBERON:0002097 ! skin
intersection_of: part_of UBERON:0001460 ! arm
relationship: constitutional_part_of UBERON:0001460 ! arm
relationship: part_of UBERON:0001460 ! arm
xref: ncithesaurus:Arm_Skin ! Arm Skin

[Term]
id: UBERON:0002428
name: limb bone
alt_id: UBERON:MA_0000688-MIAA_0000151
comment: This class was created automatically from a combination of ontologies
synonym: "limb skeleton" RELATED []
xref: EFO:0000880 ! limb bone
xref: MA:0000688 ! limb bone
xref: MAT:0000151 ! limb bone
xref: MIAA:0000151 ! limb bone
is_a: UBERON:0001474 ! bone
intersection_of: UBERON:0001474 ! bone
intersection_of: part_of UBERON:0002101 ! limb
relationship: part_of UBERON:0002091 ! appendicular skeleton
relationship: part_of UBERON:0002101 ! limb

[Term]
id: UBERON:0002429
name: cervical lymph node
alt_id: UBERON:MA_0000736-FMA_61213
def: "." [Wikipedia:Cervical_lymph_node]
subset: uberon_slim
synonym: "Cervical lymph node" EXACT [FMA:61213]
xref: FMA:61213 ! Lymph node of neck
xref: MA:0000736 ! cervical lymph node
is_a: UBERON:0000029 ! lymph node
intersection_of: UBERON:0000029 ! lymph node
intersection_of: part_of UBERON:0000002 ! cervix
xref: ncithesaurus:Cervical_Lymph_Node ! Cervical Lymph Node

[Term]
id: UBERON:0002430
name: lateral hypothalamic area
alt_id: UBERON:MA_0000834-FMA_62030
def: "." [Wikipedia:Lateral_hypothalamic_area]
subset: uberon_slim
synonym: "Lateral division of hypothalamus" EXACT [FMA:62030]
synonym: "lateral division of hypothalamus" EXACT []
synonym: "Lateral group of hypothalamic nuclei" EXACT [FMA:62030]
synonym: "lateral group of hypothalamic nuclei" EXACT []
synonym: "Lateral hypothalamic area" EXACT [FMA:62030]
synonym: "Lateral hypothalamic group" EXACT [FMA:62030]
synonym: "lateral hypothalamic group" EXACT []
synonym: "lateral hypothalamic nucleus" RELATED [MA:0000834]
synonym: "Lateral hypothalamic zone (Crosby)" EXACT [FMA:62030]
synonym: "lateral hypothalamic zone (crosby)" EXACT []
xref: FMA:62030 ! Lateral hypothalamic region
xref: MA:0000834 ! lateral hypothalamic area
is_a: UBERON:0000477 ! anatomical cluster
relationship: part_of UBERON:0002273 ! lateral zone of hypothalamus

[Term]
id: UBERON:0002431
name: pars anterior
alt_id: UBERON:MA_0000854-ZFA_0001195
synonym: "anterior lobe" RELATED [MA:0000854]
synonym: "pars distalis" RELATED [MA:0000854, ZFA:0001195]
synonym: "pars glandularis" RELATED [MA:0000854]
xref: EHDAA:7532 ! pars anterior
xref: HOG:0000244 ! pars anterior
xref: MA:0000854 ! pars anterior
xref: ZFA:0001195 ! pars anterior
is_a: UBERON:0000061 ! anatomical structure
relationship: part_of UBERON:0002196 ! adenohypophysis

[Term]
id: UBERON:0002432
name: pars intermedia
alt_id: UBERON:MA_0000855-ZFA_0001197
def: "boundary between the anterior and posterior lobes of the pituitary. It contains three types of cells: basophils, chromophobes, and colloid-filled cysts. The cysts are the remainder of Rathke's pouch. In human fetal life, this area produces melanocyte stimulating hormone or MSH which causes the release of melanin pigment in skin melanocytes (pigment cells). However, the pars intermedia is normally either very small or entirely absent in adulthood. In lower vertebrates (fish, amphibians) MSH from the pars intermedia is responsible for darkening of the skin, often in response to changes in background color. This color change is due to MSH stimulating the dispersion of melanin pigment in dermal (skin) melanophore cells." [Wikipedia:Pars_intermedia]
subset: uberon_slim
xref: EHDAA:8765 ! pars intermedia
xref: HOG:0001178 ! pars intermedia
xref: MA:0000855 ! pars intermedia
xref: ZFA:0001197 ! pars intermedia
is_a: UBERON:0000061 ! anatomical structure
relationship: part_of UBERON:0002196 ! adenohypophysis
xref: BTO:0001788 ! pars intermedia

[Term]
id: UBERON:0002433
name: pars tuberalis
alt_id: UBERON:MA_0000856-ZFA_0001196
def: "." [Wikipedia:Pars_tuberalis]
subset: uberon_slim
xref: EHDAA:8767 ! pars tuberalis
xref: HOG:0001114 ! pars tuberalis
xref: MA:0000856 ! pars tuberalis
xref: ZFA:0001196 ! pars tuberalis
is_a: UBERON:0000061 ! anatomical structure
relationship: part_of UBERON:0002196 ! adenohypophysis
xref: BTO:0001739 ! pars tuberalis

[Term]
id: UBERON:0002434
name: pituitary stalk
alt_id: UBERON:MA_0000858-ZFA_0001199
def: "a funnel-shape cavity or organ." [Wikipedia:Infundibulum]
subset: uberon_slim
synonym: "hypophysial stalk" RELATED [ZFA:0001199]
synonym: "infundibulum" RELATED [ZFA:0001199]
synonym: "infundibulum of hypothalamus" RELATED [ZFA:0001199]
xref: BTO:0000768
xref: EHDAA:7538 ! infundibulum
xref: HOG:0000245 ! infundibulum
xref: MA:0000858 ! infundibulum
xref: ZFA:0001199 ! infundibulum
is_a: UBERON:0000481 ! multi-tissue structure
relationship: part_of UBERON:0001894 ! diencephalon
xref: ncithesaurus:Pituitary_Stalk ! Pituitary Stalk

[Term]
id: UBERON:0002435
name: striatum
alt_id: UBERON:MA_0000891-FMA_77618
def: "The striatum is a large cluster of dopaminergic nerve cells, consisting of the caudate nucleus and the putamen, that controls movement, balance, and walking[GO]." [Wikipedia:Striatum]
subset: uberon_slim
synonym: "corpus striatum" RELATED [MA:0000891]
xref: FMA:77618 ! Striatum
xref: MA:0000891 ! striatum
is_a: UBERON:0002020 ! gray matter of neuraxis
relationship: part_of UBERON:0002420 ! basal ganglia

[Term]
id: UBERON:0002436
name: primary visual cortex
alt_id: UBERON:MA_0000914-FMA_236871
def: "." [Wikipedia:Primary_visual_cortex]
subset: uberon_slim
synonym: "area striata" RELATED []
synonym: "BA17" RELATED [Wikipedia:Visual_cortex]
synonym: "Brodmann area 17" RELATED [Wikipedia:Visual_cortex]
synonym: "Primary visual cortex" EXACT [FMA:236871]
synonym: "striate cortex" EXACT [FMA:236871]
synonym: "v1" RELATED []
xref: FMA:236871 ! Striate cortex
xref: MA:0000914 ! primary visual cortex
xref: NIF_GrossAnatomy:birnlex_1748 ! Brodmann (1909) area 17
is_a: UBERON:0003208 ! region of cerebral cortex
relationship: part_of UBERON:0002021 ! occipital lobe

[Term]
id: UBERON:0002437
name: cerebral white matter
alt_id: UBERON:MA_0000945-FMA_241998
xref: BTO:0000236
xref: FMA:241998 ! Cerebral white matter
xref: MA:0000945 ! cerebral white matter
is_a: UBERON:0002316 ! white matter of neuraxis
relationship: part_of UBERON:0001893 ! telencephalon
xref: ncithesaurus:Cerebral_White_Matter ! Cerebral White Matter

[Term]
id: UBERON:0002438
name: ventral tegmental nucleus
alt_id: UBERON:MA_0001031-FMA_72435
synonym: "Anterior tegmental nuclei" EXACT [FMA:72435]
synonym: "anterior tegmental nuclei" EXACT []
synonym: "Anterior tegmental nucleus" EXACT [FMA:72435]
synonym: "anterior tegmental nucleus" EXACT []
synonym: "Deep tegmental nucleus of Gudden" EXACT [FMA:72435]
synonym: "deep tegmental nucleus of gudden" EXACT []
synonym: "nucleus of gudden" RELATED [MA:0001031]
synonym: "Ventral raphe tegmental nucleus" EXACT [FMA:72435]
synonym: "ventral raphe tegmental nucleus" EXACT []
synonym: "Ventral tegmental nuclei" EXACT [FMA:72435]
synonym: "ventral tegmental nuclei" EXACT []
synonym: "Ventral tegmental nucleus (Gudden)" EXACT [FMA:72435]
synonym: "ventral tegmental nucleus (gudden)" EXACT []
synonym: "Ventral tegmental nucleus of Gudden" EXACT [FMA:72435]
synonym: "ventral tegmental nucleus of gudden" EXACT []
xref: FMA:72435 ! Ventral tegmental nucleus
xref: MA:0001031 ! ventral tegmental nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0000988 ! pons
relationship: part_of UBERON:0001943 ! midbrain tegmentum

[Term]
id: UBERON:0002439
name: myenteric nerve plexus
alt_id: UBERON:MA_0001148-FMA_63252
def: "." [Wikipedia:Auerbach's_plexus]
subset: uberon_slim
synonym: "Auerbach's plexus" EXACT [FMA:63252]
synonym: "auerbach's plexus" RELATED [MA:0001148]
synonym: "Meissner's plexus" EXACT [FMA:63252]
synonym: "meissner's plexus" EXACT []
synonym: "Myenteric plexus" EXACT [FMA:63252]
synonym: "myenteric plexus" EXACT []
synonym: "Remak's plexus" EXACT [FMA:63252]
synonym: "remak's plexus" EXACT []
synonym: "Submucous nerve plexus" EXACT [FMA:63252]
synonym: "submucous nerve plexus" EXACT []
synonym: "Submucous plexus" EXACT [FMA:63252]
synonym: "submucous plexus" EXACT []
xref: FMA:63252 ! Myenteric nerve plexus
xref: MA:0001148 ! myenteric nerve plexus
is_a: UBERON:0001816 ! autonomic nerve plexus
xref: ncithesaurus:Submucous_Nerve_Plexus ! Submucous Nerve Plexus
xref: BTO:0002436 ! myenteric plexus

[Term]
id: UBERON:0002440
name: inferior cervical ganglion
alt_id: UBERON:MA_0001154-FMA_6961
def: "." [Wikipedia:Inferior_cervical_ganglion]
subset: uberon_slim
synonym: "stellate ganglion" RELATED [MA:0001154]
synonym: "Variant cervical ganglion" EXACT [FMA:6961]
synonym: "variant cervical ganglion" EXACT []
xref: BTO:0000240
xref: EHDAA:8939 ! inferior cervical ganglion
xref: FMA:6961 ! Inferior cervical ganglion
xref: MA:0001154 ! inferior cervical ganglion
is_a: UBERON:0001991 ! cervical ganglion

[Term]
id: UBERON:0002441
name: cervicothoracic ganglion
alt_id: UBERON:MA_0001157-FMA_6469
def: "." [Wikipedia:Cervicothoracic_ganglion]
subset: uberon_slim
synonym: "Cervicothoracic sympathetic ganglion" EXACT [FMA:6469]
synonym: "cervicothoracic sympathetic ganglion" EXACT []
synonym: "Stellate ganglion" EXACT [FMA:6469]
synonym: "stellate ganglion" EXACT []
xref: FMA:6469 ! Cervicothoracic ganglion
xref: MA:0001157 ! cervicothoracic ganglion
is_a: UBERON:0001991 ! cervical ganglion
relationship: part_of UBERON:0001991 ! cervical ganglion
xref: BTO:0001815 ! stellate ganglion

[Term]
id: UBERON:0002442
name: axillary nerve trunk
alt_id: UBERON:MA_0001175-FMA_65265
synonym: "Axillary nerve trunk" EXACT [FMA:65265]
synonym: "circumflex nerve trunk" RELATED [MA:0001175]
synonym: "Right axillary neural trunk" EXACT [FMA:65265]
synonym: "right axillary neural trunk" EXACT []
xref: FMA:65265 ! Trunk of right axillary nerve
xref: MA:0001175 ! axillary nerve trunk
is_a: UBERON:0001147 ! trunk of peripheral nerve

[Term]
id: UBERON:0002443
name: choroidal blood vessel
alt_id: UBERON:MA_0001237-FMA_76550
synonym: "Choroid blood vessels" EXACT [FMA:76550]
synonym: "choroid blood vessels" EXACT []
synonym: "Choroid blood vessels set" EXACT [FMA:76550]
synonym: "choroid blood vessels set" EXACT []
xref: FMA:76550 ! Set of choroid blood vessels
xref: MA:0001237 ! choroidal blood vessel
is_a: UBERON:0001981 ! blood vessel
intersection_of: UBERON:0001981 ! blood vessel
intersection_of: part_of UBERON:0001776 ! choroid
relationship: part_of UBERON:0001776 ! choroid

[Term]
id: UBERON:0002444
name: lens fiber
alt_id: UBERON:MA_0001304-FMA_76827
def: "The lens fibers form the bulk of the lens. They are long, thin, transparent cells, with diameters typically between 4-7 micrometres and lengths of up to 12 mm long." [Wikipedia:Lens_(anatomy)#Lens_fibers]
synonym: "Lens fibers" EXACT [FMA:76827]
synonym: "lens fibers" EXACT []
synonym: "Lens fibers set" EXACT [FMA:76827]
synonym: "lens fibers set" EXACT []
synonym: "Lens fibres" EXACT [FMA:76827]
synonym: "lens fibres" EXACT []
xref: BTO:0000724
xref: EHDAA:4745 ! lens fibres
xref: EHDAA:9065 ! lens fibres
xref: FMA:76827 ! Set of lens fibers
xref: HOG:0000444 ! lens fibres
xref: MA:0001304 ! lens fiber
is_a: UBERON:0000061 ! anatomical structure
relationship: part_of UBERON:0000965 ! lens
xref: ncithesaurus:Lens_Fiber ! Lens Fiber

[Term]
id: UBERON:0002445
name: triquetral
alt_id: UBERON:MA_0001347-FMA_23715
def: "." [Wikipedia:Triquetral]
subset: uberon_slim
synonym: "Cuneiform bone of hand" EXACT [FMA:23715]
synonym: "cuneiform bone of hand" EXACT []
synonym: "cuneiform of hand" RELATED [MA:0001347]
synonym: "triangular" RELATED [MA:0001347]
synonym: "Triangular bone" EXACT [FMA:23715]
synonym: "triangular bone" EXACT []
synonym: "Triquetral bone" EXACT [FMA:23715]
synonym: "triquetral bone" EXACT []
synonym: "Triquetrum" EXACT [FMA:23715]
synonym: "triquetrum" RELATED [MA:0001347]
synonym: "ulnar carpal bone" RELATED [MA:0001347]
xref: FMA:23715 ! Triquetral
xref: MA:0001347 ! triquetral
is_a: UBERON:0001480 ! proximal carpal bone
relationship: constitutional_part_of UBERON:0001462 ! wrist
xref: ncithesaurus:Triangular_Bone ! Triangular Bone

[Term]
id: UBERON:0002446
name: patella
alt_id: UBERON:MA_0001374-FMA_24485
def: "." [Wikipedia:Patella]
comment: TODO: CHECK THIS ONE
subset: uberon_slim
synonym: "Knee bone" EXACT [FMA:24485]
synonym: "knee bone" EXACT []
xref: FMA:24485 ! Patella
xref: MA:0000666 ! knee bone
xref: MA:0001374 ! patella
is_a: UBERON:0001479 ! sesamoid bone
intersection_of: UBERON:0001474 ! bone
intersection_of: adjacent_to UBERON:0000981 ! femur
intersection_of: part_of UBERON:0001465 ! knee
xref: ncithesaurus:Patella ! Patella

[Term]
id: UBERON:0002447
name: palatine gland
alt_id: UBERON:MA_0001584-FMA_71616
def: "." [Wikipedia:Palatine_gland]
subset: uberon_slim
synonym: "Palatine glands" EXACT [FMA:71616]
synonym: "palatine glands" EXACT []
synonym: "Palatine glands set" EXACT [FMA:71616]
synonym: "palatine glands set" EXACT []
xref: FMA:71616 ! Set of palatine glands
xref: MA:0001584 ! palatine gland
is_a: UBERON:0001830 ! minor salivary gland

[Term]
id: UBERON:0002448
name: fungiform papilla
alt_id: UBERON:MA_0001595-FMA_71448
def: "." [Wikipedia:Fungiform_papilla]
subset: uberon_slim
synonym: "Fungiform papillae" EXACT [FMA:71448]
synonym: "fungiform papillae" EXACT []
synonym: "Fungiform papillae set" EXACT [FMA:71448]
synonym: "fungiform papillae set" EXACT []
xref: FMA:71448 ! Set of fungiform papillae
xref: MA:0001595 ! fungiform papilla
is_a: UBERON:0001726 ! papilla of tongue
xref: ncithesaurus:Fungiform_Papilla ! Fungiform Papilla

[Term]
id: UBERON:0002449
name: renal pyramid
alt_id: UBERON:MA_0001654-FMA_258870
def: "." [Wikipedia:Renal_pyramid]
subset: uberon_slim
xref: FMA:258870 ! Renal pyramid
xref: MA:0001654 ! renal pyramid
is_a: UBERON:0000061 ! anatomical structure
xref: ncithesaurus:Renal_Pyramid ! Renal Pyramid
xref: BTO:0003926 ! renal pyramid

[Term]
id: UBERON:0002450
name: decidua
alt_id: UBERON:MA_0001722-MIAA_0000290
def: "Uterine lining (endometrium) during a pregnancy, which forms the maternal part of the placenta. It is formed under the influence of progesterone and forms highly-characteristic cells." [Wikipedia:Decidua]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "decidua basalis" RELATED []
synonym: "endometrium" RELATED []
xref: BTO:0001360
xref: GAID:378 ! decidua
xref: MA:0001722 ! decidua
xref: MAT:0000290 ! decidua
xref: MIAA:0000290 ! decidua
is_a: UBERON:0000061 ! anatomical structure
relationship: part_of UBERON:0001987 ! placenta
xref: FMA:85538 ! Decidua
xref: ncithesaurus:Decidua ! Decidua

[Term]
id: UBERON:0002451
name: uterine gland
alt_id: UBERON:MA_0001726-FMA_71647
def: "tube like gland lined by ciliated columnar epithelium. lined by ciliated columnar epithelium." [Wikipedia:Uterine_glands]
subset: uberon_slim
synonym: "Uterine glands" EXACT [FMA:71647]
synonym: "uterine glands" EXACT []
synonym: "Uterine glands set" EXACT [FMA:71647]
synonym: "uterine glands set" EXACT []
xref: FMA:71647 ! Set of uterine glands
xref: MA:0001726 ! uterine gland
is_a: UBERON:0002530 ! gland
relationship: part_of UBERON:0000995 ! uterus
xref: ncithesaurus:Uterine_Gland ! Uterine Gland

[Term]
id: UBERON:0002452
name: prostate gland epithelium
alt_id: UBERON:MA_0001737-FMA_79643
synonym: "Prostatic gland epithelium" EXACT [FMA:79643]
synonym: "prostatic gland epithelium" EXACT []
xref: FMA:79643 ! Epithelium of prostatic gland
xref: MA:0001737 ! prostate gland epithelium
is_a: UBERON:0000483 ! epithelium
intersection_of: UBERON:0000483 ! epithelium
intersection_of: part_of UBERON:0002367 ! prostate
relationship: part_of UBERON:0002367 ! prostate

[Term]
id: UBERON:0002453
name: ethmoid sinus
alt_id: UBERON:MA_0001792-FMA_84115
def: "." [Wikipedia:Ethmoid_sinus]
subset: uberon_slim
xref: FMA:84115 ! Ethmoidal sinus
xref: MA:0001792 ! ethmoid sinus
xref: ncithesaurus:Ethmoid_Sinus
is_a: UBERON:0001825 ! paranasal sinus

[Term]
id: UBERON:0002454
name: dorsal metacarpal artery
alt_id: UBERON:MA_0001944-FMA_70800
def: "." [Wikipedia:Dorsal_metacarpal_artery]
subset: uberon_slim
synonym: "Dorsal metacarpal arteries" EXACT [FMA:70800]
synonym: "dorsal metacarpal arteries" EXACT []
synonym: "Dorsal metacarpal arteries set" EXACT [FMA:70800]
synonym: "dorsal metacarpal arteries set" EXACT []
xref: FMA:70800 ! Set of dorsal metacarpal arteries
xref: MA:0001944 ! dorsal metacarpal artery
is_a: UBERON:0001637 ! artery
xref: ncithesaurus:Dorsal_Metacarpal_Artery ! Dorsal Metacarpal Artery

[Term]
id: UBERON:0002455
name: common plantar digital arteries
alt_id: UBERON:MA_0001966-FMA_70821
def: "." [Wikipedia:Common_plantar_digital_arteries]
subset: uberon_slim
synonym: "Common plantar digital arteries" EXACT [FMA:70821]
synonym: "Common plantar digital arteries set" EXACT [FMA:70821]
synonym: "common plantar digital arteries set" EXACT []
xref: FMA:70821 ! Set of common plantar digital arteries
xref: MA:0001966 ! common plantar digital arteries
is_a: UBERON:0001637 ! artery

[Term]
id: UBERON:0002456
name: internal thoracic artery
alt_id: UBERON:MA_0001984-FMA_3960
def: "." [Wikipedia:Internal_thoracic_artery]
subset: uberon_slim
synonym: "Internal mammary artery" EXACT [FMA:3960]
synonym: "internal mammary artery" EXACT []
synonym: "Internal thoracic mammary artery" EXACT [FMA:3960]
synonym: "internal thoracic mammary artery" EXACT []
xref: EHDAA:8585 ! internal thoracic artery
xref: FMA:3960 ! Internal thoracic artery
xref: MA:0001984 ! internal thoracic artery
xref: OpenCyc:Mx4rMe0MIao8EduQrwACs5b6Bw
is_a: UBERON:0001637 ! artery
relationship: branch_of UBERON:0001533 ! subclavian artery
relationship: part_of UBERON:0001533 ! subclavian artery
xref: ncithesaurus:Internal_Mammary_Artery ! Internal Mammary Artery

[Term]
id: UBERON:0002457
name: intersegmental artery
alt_id: UBERON:MA_0001985-ZFA_0001061
xref: EHDAA:4340 ! intersegmental artery
xref: HOG:0000225 ! intersegmental artery
xref: MA:0001985 ! intersegmental artery
xref: ZFA:0001061 ! intersegmental artery
is_a: UBERON:0001637 ! artery

[Term]
id: UBERON:0002458
name: spinal artery
alt_id: UBERON:MA_0002043-ZFA_0000682
def: "." [Wikipedia:Spinal_artery]
subset: uberon_slim
synonym: "spinal arteries" RELATED [ZFA:0000682]
xref: EHDAA:4355 ! spinal artery
xref: MA:0002043 ! spinal artery
xref: ZFA:0000682 ! spinal artery
is_a: UBERON:0001637 ! artery
intersection_of: UBERON:0001637 ! artery
intersection_of: part_of UBERON:0001130 ! vertebral column
xref: ncithesaurus:Spinal_Artery ! Spinal Artery

[Term]
id: UBERON:0002459
name: inferior palpebral vein
alt_id: UBERON:MA_0002147-FMA_70847
synonym: "Inferior palpebral veins" EXACT [FMA:70847]
synonym: "inferior palpebral veins" EXACT []
synonym: "Inferior palpebral veins set" EXACT [FMA:70847]
synonym: "inferior palpebral veins set" EXACT []
synonym: "lower palpebral vein" RELATED [MA:0002147]
xref: FMA:70847 ! Set of inferior palpebral veins
xref: MA:0002147 ! inferior palpebral vein
is_a: UBERON:0001638 ! vein
xref: ncithesaurus:Inferior_Palpebral_Vein ! Inferior Palpebral Vein

[Term]
id: UBERON:0002460
name: vesical vein
alt_id: UBERON:MA_0002263-FMA_70911
def: "." [Wikipedia:Vesical_vein]
subset: uberon_slim
synonym: "Vesical veins" EXACT [FMA:70911]
synonym: "vesical veins" EXACT []
synonym: "Vesical veins set" EXACT [FMA:70911]
synonym: "vesical veins set" EXACT []
xref: FMA:70911 ! Set of vesical veins
xref: MA:0002263 ! vesical vein
is_a: UBERON:0001638 ! vein

[Term]
id: UBERON:0002461
name: anterior abdominal wall muscle
alt_id: UBERON:MA_0002268-FMA_20278
synonym: "Anterior abdominal wall muscle" EXACT [FMA:20278]
xref: FMA:20278 ! Muscle of anterior abdominal wall
xref: MA:0002268 ! anterior abdominal wall muscle
is_a: UBERON:0002378 ! muscle of abdomen
xref: ncithesaurus:Anterior_Abdominal_Wall_Muscle ! Anterior Abdominal Wall Muscle

[Term]
id: UBERON:0002462
name: erector spinae
alt_id: UBERON:MA_0002289-FMA_71302
def: "." [Wikipedia:Erector_spinae]
subset: uberon_slim
synonym: "Erector spinae" EXACT [FMA:71302]
xref: FMA:71302 ! Erector spinae muscle group
xref: HOG:0000984 ! erector spinae
xref: MA:0002289 ! erector spinae
is_a: UBERON:0001630 ! muscle organ
xref: ncithesaurus:Erector_Spinae ! Erector Spinae

[Term]
id: UBERON:0002463
name: hamstring muscle
alt_id: UBERON:MA_0002312-FMA_81022
def: "." [Wikipedia:Hamstring_muscles]
subset: uberon_slim
synonym: "Hamstring muscles" EXACT [FMA:81022]
synonym: "hamstring muscles" EXACT []
synonym: "Hamstring muscles set" EXACT [FMA:81022]
synonym: "hamstring muscles set" EXACT []
synonym: "Hamstrings" EXACT [FMA:81022]
synonym: "hamstrings" EXACT []
xref: EHDAA:8295 ! hamstring
xref: FMA:81022 ! Set of hamstring muscles
xref: HOG:0000844 ! hamstring
xref: MA:0002312 ! hamstring muscle
xref: OpenCyc:Mx4rvVjdtJwpEbGdrcN5Y29ycA
is_a: UBERON:0001630 ! muscle organ
xref: ncithesaurus:Hamstring ! Hamstring
xref: BTO:0003179 ! hamstring muscle

[Term]
id: UBERON:0002464
name: nerve trunk
alt_id: UBERON:MA_0002408-FMA_5913
synonym: "Trunk of nerve" EXACT [FMA:5913]
synonym: "trunk of nerve" EXACT []
xref: BTO:0000927
xref: EHDAA:4675 ! nerve trunk
xref: FMA:5913 ! Nerve trunk
xref: MA:0002408 ! nerve trunk
is_a: UBERON:0000063 ! organ segment
relationship: part_of UBERON:0001016 ! nervous system

[Term]
id: UBERON:0002465
name: lymphoid system
alt_id: UBERON:MA_0002435-FMA_74594
def: "The lymphatic system in vertebrates is a network of conduits that carry a clear fluid called lymph. It also includes the lymphoid tissue through which the lymph travels. Lymphoid tissue is found in many organs, particularly the lymph nodes, and in the lymphoid follicles associated with the digestive system such as the tonsils. The system also includes all the structures dedicated to the circulation and production of lymphocytes, which includes the spleen, thymus, bone marrow and the lymphoid tissue associated with the digestive system (Wikipedia)." [Wikipedia:Lymphoid_system]
subset: uberon_slim
synonym: "lymphatic system" EXACT [MA:0002435]
xref: EFO:0000870 ! lymphatic system
xref: FMA:74594 ! Lymphoid system
xref: HOG:0000842 ! lymphatic system
xref: MA:0002435 ! lymphoid system
is_a: UBERON:0000477 ! anatomical cluster
relationship: part_of UBERON:0002405 ! immune system
relationship: systemic_part_of UBERON:0002193 ! hemolymphoid system
xref: ncithesaurus:Lymphatic_System ! Lymphatic System

[Term]
id: UBERON:0002466
name: intestine secretion
alt_id: UBERON:MA_0002515-FMA_62974
def: "Clear to pale yellow watery secretions from the glands lining the small intestine walls. Secretion is stimulated by the mechanical pressure of partly digested food in the intestine." [Wikipedia:Succus_entericus]
subset: uberon_slim
synonym: "Succus entericus" EXACT [FMA:62974]
synonym: "succus entericus" EXACT []
xref: FMA:62974 ! Intestinal secretion
xref: MA:0002515 ! intestine secretion
is_a: UBERON:0000463 ! portion of organism substance
xref: ncithesaurus:Intestinal_Secretion ! Intestinal Secretion

[Term]
id: UBERON:0002467
name: filiform papilla
alt_id: UBERON:MA_0002678-FMA_71447
def: "." [Wikipedia:Filiform_papilla]
subset: uberon_slim
synonym: "Filiform papillae" EXACT [FMA:71447]
synonym: "filiform papillae" EXACT []
synonym: "Filiform papillae set" EXACT [FMA:71447]
synonym: "filiform papillae set" EXACT []
xref: FMA:71447 ! Set of filiform papillae
xref: MA:0002678 ! filiform papilla
is_a: UBERON:0001726 ! papilla of tongue
xref: ncithesaurus:Filiform_Papilla ! Filiform Papilla

[Term]
id: UBERON:0002468
name: foliate papilla
alt_id: UBERON:MA_0002679-FMA_71450
def: "." [Wikipedia:Foliate_papilla]
subset: uberon_slim
synonym: "Foliate papillae" EXACT [FMA:71450]
synonym: "foliate papillae" EXACT []
synonym: "Foliate papillae set" EXACT [FMA:71450]
synonym: "foliate papillae set" EXACT []
xref: FMA:71450 ! Set of foliate papillae
xref: MA:0002679 ! foliate papilla
is_a: UBERON:0001726 ! papilla of tongue
xref: ncithesaurus:Foliate_Papilla ! Foliate Papilla

[Term]
id: UBERON:0002469
name: esophagus mucosa
alt_id: UBERON:MA_0002680-FMA_62996
synonym: "Esophageal mucosa" EXACT [FMA:62996]
synonym: "esophageal mucosa" EXACT []
synonym: "Esophagus mucosa" EXACT [FMA:62996]
synonym: "Mucous membrane of oesophagus" EXACT [FMA:62996]
synonym: "mucous membrane of oesophagus" EXACT []
synonym: "Muscularis mucosae of oesophagus" EXACT [FMA:62996]
synonym: "muscularis mucosae of oesophagus" EXACT []
synonym: "Oesophageal mucosa" EXACT [FMA:62996]
synonym: "oesophageal mucosa" EXACT []
xref: FMA:62996 ! Mucosa of esophagus
xref: MA:0002680 ! esophagus mucosa
is_a: UBERON:0000064 ! organ part
intersection_of: UBERON:0000344 ! mucosa
intersection_of: OBO_REL:part_of UBERON:0001043 ! esophagus
relationship: constitutional_part_of UBERON:0001096 ! wall of esophagus
relationship: part_of UBERON:0001096 ! wall of esophagus
xref: ncithesaurus:Esophageal_Mucosa ! Esophageal Mucosa
xref: BTO:0002859 ! esophageal mucosa

[Term]
id: UBERON:0002470
name: autopod
alt_id: UBERON:MA_0002714-MIAA_0000091
def: "Terminal segment of free upper limb. The generic name for hand, paw, foot etc" [UBERON:cjm]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "distal free limb segment" EXACT []
synonym: "paw" RELATED []
synonym: "pod" RELATED []
xref: EFO:0000877 ! autopod
xref: MA:0002714 ! autopod
xref: MAT:0000091 ! autopod
xref: MIAA:0000091 ! autopod
is_a: UBERON:0002529 ! limb segment
xref: FMA:83015 ! Distal free limb segment

[Term]
id: UBERON:0002473
name: intercerebral commissure
alt_id: UBERON:MA_0002721-FMA_67930
synonym: "interhemispheric commissure" RELATED [MA:0002721]
xref: FMA:67930 ! Intercerebral commissure
xref: MA:0002721 ! intercerebral commissure
is_a: UBERON:0001020 ! commissure
relationship: part_of UBERON:0001893 ! telencephalon
relationship: part_of UBERON:0002316 ! white matter of neuraxis

[Term]
id: UBERON:0002474
name: cerebellar peduncle
alt_id: UBERON:MA_0002742-FMA_77791
def: "." [Wikipedia:Cerebellar_peduncle]
subset: uberon_slim
synonym: "Cerebellar peduncles" EXACT [FMA:77791]
synonym: "cerebellar peduncles" EXACT []
synonym: "Cerebellar peduncles set" EXACT [FMA:77791]
synonym: "cerebellar peduncles set" EXACT []
xref: FMA:77791 ! Set of cerebellar peduncles
xref: MA:0002742 ! cerebellar peduncle
is_a: UBERON:0002317 ! white matter of cerebellum

[Term]
id: UBERON:0002475
name: saphenous nerve
alt_id: UBERON:MA_0002761-FMA_45262
def: "." [Wikipedia:Saphenous_nerve]
subset: uberon_slim
xref: FMA:45262 ! Saphenous nerve
xref: MA:0002761 ! saphenous nerve
xref: OpenCyc:Mx4rvY0kgpwpEbGdrcN5Y29ycA
is_a: UBERON:0002003 ! peripheral nerve
relationship: branch_of UBERON:0001267 ! femoral nerve

[Term]
id: UBERON:0002476
name: lateral globus pallidus
alt_id: UBERON:MA_0002767-FMA_61839
def: "." [Wikipedia:Lateral_globus_pallidus]
subset: uberon_slim
synonym: "External globus pallidus" EXACT [FMA:61839]
synonym: "external globus pallidus" EXACT []
synonym: "Globus pallidus external segment" EXACT [FMA:61839]
synonym: "globus pallidus external segment" RELATED [MA:0002767]
synonym: "Globus pallidus externus" EXACT [FMA:61839]
synonym: "globus pallidus externus" EXACT []
synonym: "Globus pallidus lateral segment" EXACT [FMA:61839]
synonym: "globus pallidus lateral segment" RELATED [MA:0002767]
synonym: "Globus pallidus, lateral segment" EXACT [FMA:61839]
synonym: "globus pallidus, lateral segment" EXACT []
synonym: "Lateral pallidal segment" EXACT [FMA:61839]
synonym: "lateral pallidal segment" EXACT []
synonym: "Lateral part of globus pallidus" EXACT [FMA:61839]
synonym: "lateral part of globus pallidus" EXACT []
synonym: "Pallidus II" EXACT [FMA:61839]
synonym: "pallidus ii" EXACT []
xref: FMA:61839 ! Lateral globus pallidus
xref: MA:0002767 ! lateral globus pallidus
is_a: UBERON:0002020 ! gray matter of neuraxis
relationship: part_of UBERON:0001875 ! globus pallidus

[Term]
id: UBERON:0002477
name: medial globus pallidus
alt_id: UBERON:MA_0002768-FMA_61840
def: "." [Wikipedia:Medial_globus_pallidus]
subset: uberon_slim
synonym: "entopeduncular nucleus" RELATED [MA:0002768]
synonym: "Entopeduncular nucleus (Monakow)" EXACT [FMA:61840]
synonym: "entopeduncular nucleus (monakow)" EXACT []
synonym: "globus pallidus inernal segment" RELATED [MA:0002768]
synonym: "Globus pallidus internal segment" EXACT [FMA:61840]
synonym: "globus pallidus internal segment" EXACT []
synonym: "Globus pallidus internus" EXACT [FMA:61840]
synonym: "globus pallidus internus" EXACT []
synonym: "Globus pallidus medial segment" EXACT [FMA:61840]
synonym: "globus pallidus medial segment" RELATED [MA:0002768]
synonym: "Globus pallidus, medial segment" EXACT [FMA:61840]
synonym: "globus pallidus, medial segment" EXACT []
synonym: "Internal globus pallidus" EXACT [FMA:61840]
synonym: "internal globus pallidus" EXACT []
synonym: "Medial pallidal segment" EXACT [FMA:61840]
synonym: "medial pallidal segment" EXACT []
synonym: "Medial part of globus pallidus" EXACT [FMA:61840]
synonym: "medial part of globus pallidus" EXACT []
synonym: "Mesial pallidum" EXACT [FMA:61840]
synonym: "mesial pallidum" EXACT []
synonym: "Pallidus I" EXACT [FMA:61840]
synonym: "pallidus i" EXACT []
xref: FMA:61840 ! Medial globus pallidus
xref: MA:0002768 ! medial globus pallidus
is_a: UBERON:0002020 ! gray matter of neuraxis
relationship: part_of UBERON:0001875 ! globus pallidus

[Term]
id: UBERON:0002478
name: orbitosphenoid
alt_id: UBERON:MA_0002773-ZFA_0000253
synonym: "lesser wing of sphenoid bone" RELATED [MA:0002773]
xref: AAO:0000345 ! orbitosphenoid
xref: HOG:0001153 ! orbitosphenoid
xref: MA:0002773 ! orbitosphenoid
xref: ZFA:0000253 ! orbitosphenoid
is_a: UBERON:0002513 ! endochondral bone
relationship: part_of UBERON:0001677 ! sphenoid bone

[Term]
id: UBERON:0002479
name: dorsal lateral geniculate nucleus
alt_id: UBERON:MA_0002775-FMA_62214
synonym: "Dorsal lateral geniculate nucleus" EXACT [FMA:62214]
synonym: "dorsal nucleus of lateral geniculate body" RELATED [MA:0002775]
synonym: "Lateral geniculate complex, dorsal part" EXACT [FMA:62214]
synonym: "lateral geniculate complex, dorsal part" EXACT []
xref: FMA:62214 ! Dorsal nucleus of lateral geniculate body
xref: MA:0002775 ! dorsal lateral geniculate nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0001926 ! lateral geniculate body

[Term]
id: UBERON:0002480
name: ventral lateral geniculate nucleus
alt_id: UBERON:MA_0002776-FMA_62215
synonym: "Lateral geniculate complex, ventral part" EXACT [FMA:62215]
synonym: "lateral geniculate complex, ventral part" EXACT []
synonym: "Pregeniculate nucleus" EXACT [FMA:62215]
synonym: "pregeniculate nucleus" EXACT []
synonym: "Ventral lateral geniculate nucleus" EXACT [FMA:62215]
synonym: "ventral nucleus of lateral geniculate body" RELATED [MA:0002776]
xref: FMA:62215 ! Ventral nucleus of lateral geniculate body
xref: MA:0002776 ! ventral lateral geniculate nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0001926 ! lateral geniculate body

[Term]
id: UBERON:0002481
name: bone tissue
alt_id: UBERON:MA_0002780-FMA_224804
def: "." [Wikipedia:Bone_tissue]
subset: uberon_slim
xref: FMA:224804 ! Bone tissue
xref: galen:BoneTissue
xref: MA:0002780 ! bone tissue
is_a: UBERON:0002384 ! connective tissue
relationship: part_of UBERON:0001474 ! bone
xref: ncithesaurus:Bone_Tissue ! Bone Tissue

[Term]
id: UBERON:0002482
name: lamellar bone
alt_id: UBERON:MA_0002781-FMA_224806
xref: FMA:224806 ! Lamellar bone
xref: galen:LamellarBone
xref: MA:0002781 ! lamellar bone
is_a: UBERON:0002481 ! bone tissue

[Term]
id: UBERON:0002483
name: trabecular bone
alt_id: UBERON:MA_0002782-FMA_24019
def: "." [Wikipedia:Trabecular_bone]
subset: uberon_slim
synonym: "Cancellous bone" EXACT [FMA:24019]
synonym: "cancellous bone" RELATED [MA:0002782]
synonym: "Spongy bone" EXACT [FMA:24019]
synonym: "spongy bone" EXACT []
synonym: "Trabecular bone tissue" EXACT [FMA:24019]
synonym: "trabecular bone tissue" EXACT []
xref: FMA:24019 ! Trabecular bone
xref: MA:0002782 ! trabecular bone
is_a: UBERON:0002481 ! bone tissue
xref: BTO:0001700 ! cancellous bone

[Term]
id: UBERON:0002484
name: bone marrow cavity
alt_id: UBERON:MA_0002783-FMA_75147
synonym: "Cavity of cancellous bone" EXACT [FMA:75147]
synonym: "cavity of cancellous bone" EXACT []
xref: FMA:75147 ! Bone marrow cavity
xref: MA:0002783 ! bone marrow cavity
is_a: UBERON:0002553 ! anatomical cavity
relationship: part_of UBERON:0001439 ! compact bone

[Term]
id: UBERON:0002485
name: prostate duct
alt_id: UBERON:MA_0002785-FMA_19580
synonym: "Duct of prostate" EXACT [FMA:19580]
synonym: "duct of prostate" EXACT []
synonym: "Duct of prostate gland" EXACT [FMA:19580]
synonym: "duct of prostate gland" EXACT []
xref: FMA:19580 ! Prostatic duct
xref: MA:0002785 ! prostate duct
is_a: UBERON:0000058 ! duct
intersection_of: UBERON:0000058 ! duct
intersection_of: part_of UBERON:0002367 ! prostate
relationship: part_of UBERON:0002367 ! prostate
xref: ncithesaurus:Prostatic_Duct ! Prostatic Duct

[Term]
id: UBERON:0002486
name: glottis
alt_id: UBERON:MA_0002788-FMA_55414
def: "." [Wikipedia:Glottis]
subset: uberon_slim
xref: FMA:55414 ! Glottis
xref: MA:0002788 ! glottis
is_a: UBERON:0000477 ! anatomical cluster
relationship: part_of UBERON:0001737 ! larynx
xref: ncithesaurus:Glottis ! Glottis
xref: BTO:0001627 ! glottis

[Term]
id: UBERON:0002487
name: tooth cavity
alt_id: UBERON:MA_0002792-FMA_55660
def: "." [Wikipedia:Tooth_cavity]
subset: uberon_slim
synonym: "Cavitas dentis" EXACT [FMA:55660]
synonym: "cavitas dentis" EXACT []
synonym: "cavity of tooth" RELATED [MA:0002792]
synonym: "Pulp cavity" EXACT [FMA:55660]
synonym: "pulp cavity" EXACT []
synonym: "Pulp cavity of tooth" EXACT [FMA:55660]
synonym: "pulp cavity of tooth" EXACT []
synonym: "Tooth cavity" EXACT [FMA:55660]
synonym: "tooth pulp cavity" RELATED [MA:0002792]
xref: FMA:55660 ! Cavity of tooth
xref: MA:0002792 ! tooth cavity
is_a: UBERON:0002558 ! organ cavity
relationship: part_of UBERON:0001091 ! tooth

[Term]
id: UBERON:0002488
name: helix
alt_id: UBERON:MA_0002793-FMA_60992
def: "." [Wikipedia:Helix]
subset: uberon_slim
synonym: "Helical part of pinna" EXACT [FMA:60992]
synonym: "helical part of pinna" EXACT []
synonym: "Helix (Auricula)" EXACT [FMA:60992]
synonym: "helix (auricula)" EXACT []
synonym: "Helix of auricle of ear" EXACT [FMA:60992]
synonym: "helix of auricle of ear" EXACT []
synonym: "Helix of ear" EXACT [FMA:60992]
synonym: "helix of ear" EXACT []
synonym: "Helix of pinna" EXACT [FMA:60992]
synonym: "helix of pinna" EXACT []
xref: FMA:60992 ! Helix
xref: MA:0002793 ! helix
is_a: UBERON:0001444 ! subdivision of head
relationship: part_of UBERON:0001757 ! pinna
xref: ncithesaurus:Helix ! Helix

[Term]
id: UBERON:0002489
name: coronal suture
alt_id: UBERON:MA_0002795-FMA_52928
def: "." [Wikipedia:Coronal_suture]
subset: uberon_slim
synonym: "Coronal suture of skull" EXACT [FMA:52928]
synonym: "coronal suture of skull" EXACT []
xref: FMA:52928 ! Coronal suture
xref: MA:0002795 ! coronal suture
xref: OpenCyc:Mx4rv2eGHZwpEbGdrcN5Y29ycA
is_a: UBERON:0000969 ! suture
relationship: systemic_part_of UBERON:0001703 ! neurocranium

[Term]
id: UBERON:0002490
name: frontal suture
alt_id: UBERON:MA_0002796-FMA_52989
def: "." [Wikipedia:Frontal_suture]
subset: uberon_slim
synonym: "Frontal suture of skull" EXACT [FMA:52989]
synonym: "frontal suture of skull" EXACT []
synonym: "Metopic suture" EXACT [FMA:52989]
synonym: "metopic suture" RELATED [MA:0002796]
synonym: "Sutura frontalis" EXACT [FMA:52989]
synonym: "sutura frontalis" EXACT []
xref: FMA:52989 ! Frontal suture
xref: MA:0002796 ! frontal suture
is_a: UBERON:0000969 ! suture

[Term]
id: UBERON:0002491
name: lambdoid suture
alt_id: UBERON:MA_0002797-FMA_52933
def: "." [Wikipedia:Lambdoid_suture]
subset: uberon_slim
synonym: "Lambdoid suture of skull" EXACT [FMA:52933]
synonym: "lambdoid suture of skull" EXACT []
synonym: "lambdoidal suture" RELATED [MA:0002797]
xref: FMA:52933 ! Lambdoid suture
xref: MA:0002797 ! lambdoid suture
is_a: UBERON:0000969 ! suture
relationship: systemic_part_of UBERON:0001703 ! neurocranium

[Term]
id: UBERON:0002492
name: sagittal suture
alt_id: UBERON:MA_0002798-FMA_52929
def: "." [Wikipedia:Sagittal_suture]
subset: uberon_slim
synonym: "Sagittal suture of skull" EXACT [FMA:52929]
synonym: "sagittal suture of skull" EXACT []
xref: FMA:52929 ! Sagittal suture
xref: MA:0002798 ! sagittal suture
is_a: UBERON:0000969 ! suture
relationship: systemic_part_of UBERON:0001703 ! neurocranium

[Term]
id: UBERON:0002493
name: uterine artery
alt_id: UBERON:MA_0002799-FMA_18829
def: "." [Wikipedia:Uterine_artery]
subset: uberon_slim
xref: FMA:18829 ! Uterine artery
xref: MA:0002799 ! uterine artery
is_a: UBERON:0001637 ! artery
intersection_of: UBERON:0001637 ! artery
intersection_of: part_of UBERON:0000995 ! uterus

[Term]
id: UBERON:0002494
name: papillary muscle
alt_id: UBERON:MA_0002800-FMA_12154
def: "." [Wikipedia:Papillary_muscle]
subset: uberon_slim
synonym: "Papillary muscle of ventricle" EXACT [FMA:12154]
synonym: "papillary muscle of ventricle" RELATED [MA:0002800]
synonym: "ventricular papillary muscle" RELATED [MA:0002800]
xref: EHDAA:8655 ! papillary muscles
xref: FMA:12154 ! Papillary muscle
xref: HOG:0001392 ! papillary muscle
xref: MA:0002800 ! papillary muscle
xref: OpenCyc:Mx4rDid0jLYYEduAAAACs2IKfQ
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0002082 ! cardiac ventricle
xref: ncithesaurus:Papillary_Muscle ! Papillary Muscle

[Term]
id: UBERON:0002495
name: long bone
alt_id: UBERON:MA_0002802-FMA_7474
def: "." [Wikipedia:Long_bone]
subset: uberon_slim
xref: FMA:7474 ! Long bone
xref: MA:0002802 ! long bone
xref: OpenCyc:Mx4rv6axr5wpEbGdrcN5Y29ycA
is_a: UBERON:0001474 ! bone
relationship: part_of UBERON:0002091 ! appendicular skeleton
relationship: systemic_part_of UBERON:0001434 ! skeleton
xref: ncithesaurus:Long_Bone ! Long Bone

[Term]
id: UBERON:0002496
name: stapes base
alt_id: UBERON:MA_0002804-FMA_52769
def: "." [Wikipedia:Footplate]
subset: uberon_slim
synonym: "base of stapes" RELATED [MA:0002804]
synonym: "Footplate" EXACT [FMA:52769]
synonym: "footplate" EXACT []
synonym: "Stapes base" EXACT [FMA:52769]
synonym: "stapes footplate" RELATED [MA:0002804]
xref: EHDAA:5143 ! footplate
xref: EHDAA:6096 ! footplate
xref: FMA:52769 ! Base of stapes
xref: MA:0002804 ! stapes base
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001687 ! stapes

[Term]
id: UBERON:0002497
name: acromion
alt_id: UBERON:MA_0002805-FMA_23260
def: "." [Wikipedia:Acromion]
subset: uberon_slim
xref: AAO:0000826 ! acromion
xref: FMA:23260 ! Acromion
xref: MA:0002805 ! acromion
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001124 ! scapula
xref: ncithesaurus:Acromion ! Acromion

[Term]
id: UBERON:0002498
name: deltoid tuberosity
alt_id: UBERON:MA_0002808-FMA_23418
def: "." [Wikipedia:Deltoid_tuberosity]
subset: uberon_slim
synonym: "Deltoid tuberosity" EXACT [FMA:23418]
synonym: "Tuberositas deltoidea (Corpus humeri)" EXACT [FMA:23418]
synonym: "tuberositas deltoidea (corpus humeri)" EXACT []
xref: FMA:23418 ! Deltoid tuberosity of humerus
xref: MA:0002808 ! deltoid tuberosity
is_a: UBERON:0000064 ! organ part

[Term]
id: UBERON:0002499
name: cochlear labyrinth
alt_id: UBERON:MA_0002809-FMA_61259
def: "." [Wikipedia:Cochlear_labyrinth]
subset: uberon_slim
xref: FMA:61259 ! Cochlear labyrinth
xref: MA:0002809 ! cochlear labyrinth
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001844 ! cochlea
relationship: part_of UBERON:0001849 ! membranous labyrinth
xref: ncithesaurus:Cochlear_Labyrinth ! Cochlear Labyrinth

[Term]
id: UBERON:0002500
name: zygomatic arch
alt_id: UBERON:MA_0002810-FMA_53120
def: "." [Wikipedia:Zygomatic_arch]
subset: uberon_slim
synonym: "Zygoma" EXACT [FMA:53120]
synonym: "zygoma" EXACT []
xref: FMA:53120 ! Zygomatic arch
xref: MA:0002810 ! zygomatic arch
is_a: UBERON:0000061 ! anatomical structure
xref: ncithesaurus:Zygomatic_Arch ! Zygomatic Arch

[Term]
id: UBERON:0002501
name: oval window
alt_id: UBERON:MA_0002813-FMA_56913
def: "." [Wikipedia:Oval_window]
subset: uberon_slim
synonym: "Oval window of petrous part of temporal bone" EXACT [FMA:56913]
synonym: "oval window of petrous part of temporal bone" EXACT []
synonym: "Vestibular window" EXACT [FMA:56913]
synonym: "vestibular window" RELATED [MA:0002813]
xref: FMA:56913 ! Oval window
xref: MA:0002813 ! oval window
is_a: UBERON:0000464 ! anatomical space
relationship: part_of UBERON:0001694 ! petrous part of temporal bone

[Term]
id: UBERON:0002502
name: round window
alt_id: UBERON:MA_0002814-FMA_56932
def: "." [Wikipedia:Round_window]
subset: uberon_slim
synonym: "Cochlear window" EXACT [FMA:56932]
synonym: "cochlear window" RELATED [MA:0002814]
synonym: "Round window of petrous part of temporal bone" EXACT [FMA:56932]
synonym: "round window of petrous part of temporal bone" EXACT []
xref: FMA:56932 ! Round window
xref: MA:0002814 ! round window
is_a: UBERON:0000464 ! anatomical space
relationship: part_of UBERON:0001694 ! petrous part of temporal bone

[Term]
id: UBERON:0002503
name: greater trochanter
alt_id: UBERON:MA_0002822-FMA_32852
def: "." [Wikipedia:Greater_trochanter]
subset: uberon_slim
synonym: "Greater trochanter of femur" EXACT [FMA:32852]
synonym: "greater trochanter of femur" EXACT []
xref: FMA:32852 ! Greater trochanter
xref: galen:GreaterTrochanter
xref: MA:0002822 ! greater trochanter
is_a: UBERON:0000980 ! trochanter

[Term]
id: UBERON:0002504
name: lesser trochanter
alt_id: UBERON:MA_0002823-FMA_32853
def: "." [Wikipedia:Lesser_trochanter]
subset: uberon_slim
synonym: "Lesser trochanter of femur" EXACT [FMA:32853]
synonym: "lesser trochanter of femur" EXACT []
xref: FMA:32853 ! Lesser trochanter
xref: galen:LesserTrochanter
xref: MA:0002823 ! lesser trochanter
is_a: UBERON:0000980 ! trochanter
xref: ncithesaurus:Lesser_Trochanter ! Lesser Trochanter

[Term]
id: UBERON:0002505
name: spiral modiolar artery
alt_id: UBERON:MA_0002824-FMA_52312
xref: FMA:52312 ! Spiral modiolar artery
xref: MA:0002824 ! spiral modiolar artery
is_a: UBERON:0001637 ! artery

[Term]
id: UBERON:0002506
name: iris epithelium
alt_id: UBERON:MA_0002826-FMA_58517
synonym: "Epithelium pigmentosum (Iris)" EXACT [FMA:58517]
synonym: "epithelium pigmentosum (iris)" EXACT []
synonym: "Iris epithelium" EXACT [FMA:58517]
synonym: "iris pigmented epithelium" RELATED [MA:0002826]
synonym: "Pigmented epithelium of iris" EXACT [FMA:58517]
synonym: "pigmented epithelium of iris" EXACT []
xref: FMA:58517 ! Epithelium of iris
xref: MA:0002826 ! iris epithelium
is_a: UBERON:0000488 ! atypical epithelium
intersection_of: UBERON:0000483 ! epithelium
intersection_of: part_of UBERON:0001769 ! iris
relationship: part_of UBERON:0001769 ! iris

[Term]
id: UBERON:0002507
name: abdominal lymph node
alt_id: UBERON:MA_0002827-FMA_12787
synonym: "Lymph node of abdomen" EXACT [FMA:12787]
synonym: "lymph node of abdomen" EXACT []
xref: FMA:12787 ! Abdominal lymph node
xref: MA:0002827 ! abdominal lymph node
is_a: UBERON:0000029 ! lymph node
intersection_of: UBERON:0000029 ! lymph node
intersection_of: part_of UBERON:0000916 ! abdomen

[Term]
id: UBERON:0002508
name: celiac lymph node
alt_id: UBERON:MA_0002828-FMA_12792
def: "." [Wikipedia:Celiac_lymph_node]
subset: uberon_slim
synonym: "Celiac node" EXACT [FMA:12792]
synonym: "celiac node" EXACT []
synonym: "Coeliac node" EXACT [FMA:12792]
synonym: "coeliac node" EXACT []
synonym: "Nodus lymphaticus coeliacus" EXACT [FMA:12792]
synonym: "nodus lymphaticus coeliacus" EXACT []
synonym: "Terminal ventral aortic node" EXACT [FMA:12792]
synonym: "terminal ventral aortic node" EXACT []
xref: FMA:12792 ! Celiac lymph node
xref: MA:0002828 ! celiac lymph node
is_a: UBERON:0002507 ! abdominal lymph node
xref: ncithesaurus:Celiac_Lymph_Node ! Celiac Lymph Node

[Term]
id: UBERON:0002509
name: mesenteric lymph node
alt_id: UBERON:MA_0002829-FMA_12795
synonym: "Mesenteric node" EXACT [FMA:12795]
synonym: "mesenteric node" EXACT []
xref: BTO:0000767
xref: FMA:12795 ! Mesenteric lymph node
xref: MA:0002829 ! mesenteric lymph node
is_a: UBERON:0002507 ! abdominal lymph node

[Term]
id: UBERON:0002510
name: anterior fontanel
alt_id: UBERON:MA_0002830-FMA_75439
xref: FMA:75439 ! Anterior fontanelle
xref: MA:0002830 ! anterior fontanel
is_a: UBERON:0002221 ! fontanelle

[Term]
id: UBERON:0002511
name: trabecula carnea
alt_id: UBERON:MA_0002831-FMA_7269
synonym: "heart trabecula" RELATED []
synonym: "trabecula of heart" RELATED []
xref: FMA:7269 ! Trabecula carnea
xref: MA:0002831 ! trabecula carnea
is_a: UBERON:0000440 ! trabecula
relationship: part_of UBERON:0000948 ! heart

[Term]
id: UBERON:0002512
name: corpus luteum
alt_id: UBERON:MA_0002834-FMA_18619
def: "." [Wikipedia:Corpus_luteum]
subset: uberon_slim
synonym: "Corpus luteum of ovary" EXACT [FMA:18619]
synonym: "corpus luteum of ovary" EXACT []
xref: BTO:0000292
xref: FMA:18619 ! Corpus luteum
xref: MA:0002834 ! corpus luteum
is_a: UBERON:0000064 ! organ part
relationship: develops_from UBERON:0001305 ! follicle of ovary
relationship: part_of UBERON:0000949 ! endocrine system
relationship: part_of UBERON:0000992 ! ovary
xref: ncithesaurus:Corpus_Luteum ! Corpus Luteum

[Term]
id: UBERON:0002513
name: endochondral bone
alt_id: UBERON:MA_0002836-ZFA_0001591
def: "." [Wikipedia:Endochondral_bone]
subset: uberon_slim
xref: MA:0002836 ! endochondral bone
xref: ZFA:0001591 ! endochondral bone
is_a: UBERON:0001474 ! bone
is_a: UBERON:0002481 ! bone tissue
xref: BTO:0002157 ! endochondral bone

[Term]
id: UBERON:0002514
name: intramembranous bone
alt_id: UBERON:MA_0002837-ZFA_0001635
xref: MA:0002837 ! intramembranous bone
xref: ZFA:0001635 ! intramembranous bone
is_a: UBERON:0001474 ! bone
relationship: develops_from UBERON:0003104 ! mesenchyme

[Term]
id: UBERON:0002515
name: periosteum
alt_id: UBERON:MA_0002838-FMA_24041
def: "." [Wikipedia:Periosteum]
subset: uberon_slim
xref: BTO:0001022
xref: FMA:24041 ! Periosteum
xref: MA:0002838 ! periosteum
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001474 ! bone
xref: ncithesaurus:Periosteum ! Periosteum

[Term]
id: UBERON:0002516
name: epiphyseal plate
alt_id: UBERON:MA_0002839-FMA_75427
def: "." [Wikipedia:Epiphyseal_plate]
subset: uberon_slim
synonym: "Epiphyseal plate" EXACT [FMA:75427]
synonym: "Growth plate" EXACT [FMA:75427]
synonym: "growth plate" RELATED [MA:0002839]
xref: FMA:75427 ! Epiphysial plate
xref: MA:0002839 ! epiphyseal plate
is_a: UBERON:0002384 ! connective tissue

[Term]
id: UBERON:0002517
name: basicranium
alt_id: UBERON:MA_0002840-FMA_52801
def: "." [Wikipedia:Base_of_skull]
subset: uberon_slim
synonym: "Base of skull" EXACT [FMA:52801]
synonym: "base of skull" EXACT []
synonym: "Cranial base" EXACT [FMA:52801]
synonym: "cranial base" RELATED [MA:0002840]
xref: FMA:52801 ! Basicranium
xref: MA:0002840 ! basicranium
is_a: UBERON:0000061 ! anatomical structure
relationship: part_of UBERON:0000032 ! cranial structure
relationship: systemic_part_of UBERON:0001703 ! neurocranium

[Term]
id: UBERON:0002518
name: otolith organ
alt_id: UBERON:MA_0002841-ZFA_0000559
def: "." [Wikipedia:Otolith_organ]
subset: uberon_slim
synonym: "otolith organs" RELATED [ZFA:0000559]
xref: MA:0002841 ! otolith organ
xref: ZFA:0000559 ! otolith organ
relationship: part_of UBERON:0001862 ! vestibular labyrinth

[Term]
id: UBERON:0002519
name: otolithic membrane
alt_id: UBERON:MA_0002842-FMA_75573
def: "." [Wikipedia:Otolithic_membrane]
subset: uberon_slim
synonym: "Otolithic membrane" EXACT [FMA:75573]
xref: FMA:75573 ! Otolith layer of statoconial membrane
xref: MA:0002842 ! otolithic membrane
is_a: UBERON:0000476 ! acellular anatomical structure
relationship: part_of UBERON:0001862 ! vestibular labyrinth

[Term]
id: UBERON:0002520
name: submandibular lymph node
alt_id: UBERON:MA_0002843-FMA_61224
def: "." [Wikipedia:Submandibular_lymph_node]
subset: uberon_slim
synonym: "Level Ib neck node" EXACT [FMA:61224]
synonym: "level ib neck node" EXACT []
synonym: "Submandibular node" EXACT [FMA:61224]
synonym: "submandibular node" EXACT []
xref: BTO:0000769
xref: FMA:61224 ! Submandibular lymph node
xref: MA:0002843 ! submandibular lymph node
is_a: UBERON:0000029 ! lymph node

[Term]
id: UBERON:0002521
name: elastic tissue
alt_id: UBERON:MA_0002853-FMA_20113
def: "." [Wikipedia:Elastic_tissue]
subset: uberon_slim
synonym: "Elastic connective tissue" EXACT [FMA:20113]
synonym: "elastic connective tissue" EXACT []
synonym: "Textus connectivus elasticus" EXACT [FMA:20113]
synonym: "textus connectivus elasticus" EXACT []
xref: FMA:20113 ! Elastic tissue
xref: MA:0002853 ! elastic tissue
is_a: UBERON:0002384 ! connective tissue

[Term]
id: UBERON:0002522
name: tunica media
alt_id: UBERON:MA_0002855-FMA_55590
def: "." [Wikipedia:Tunica_media]
subset: uberon_slim
xref: FMA:55590 ! Tunica media
xref: MA:0002855 ! tunica media
is_a: UBERON:0000064 ! organ part
xref: ncithesaurus:Tunica_Media ! Tunica Media

[Term]
id: UBERON:0002523
name: tunica intima
alt_id: UBERON:MA_0002861-FMA_55589
def: "." [Wikipedia:Tunica_intima]
subset: uberon_slim
xref: FMA:55589 ! Tunica intima
xref: MA:0002861 ! tunica intima
is_a: UBERON:0000064 ! organ part
xref: ncithesaurus:Tunica_Intima ! Tunica Intima

[Term]
id: UBERON:0002524
name: mediastinal lymph node
alt_id: UBERON:MA_0002877-FMA_12774
synonym: "Mediastinal node" EXACT [FMA:12774]
synonym: "mediastinal node" EXACT []
xref: FMA:12774 ! Mediastinal lymph node
xref: MA:0002877 ! mediastinal lymph node
is_a: UBERON:0000029 ! lymph node
xref: ncithesaurus:Mediastinal_Lymph_Node ! Mediastinal Lymph Node

[Term]
id: UBERON:0002525
name: brachial lymph node
alt_id: UBERON:MA_0002878-FMA_44314
xref: FMA:44314 ! Brachial lymph node
xref: MA:0002878 ! brachial lymph node
is_a: UBERON:0000029 ! lymph node

[Term]
id: UBERON:0002526
name: lumbar lymph node
alt_id: UBERON:MA_0002879-FMA_84599
xref: FMA:84599 ! Lumbar lymph node
xref: MA:0002879 ! lumbar lymph node
is_a: UBERON:0002507 ! abdominal lymph node

[Term]
id: UBERON:0002527
name: pancreatic lymph node
alt_id: UBERON:MA_0002881-FMA_16626
synonym: "Pancreatic node" EXACT [FMA:16626]
synonym: "pancreatic node" EXACT []
synonym: "pyloric lymph node" RELATED [MA:0002881]
xref: FMA:16626 ! Pancreatic lymph node
xref: MA:0002881 ! pancreatic lymph node
is_a: UBERON:0002507 ! abdominal lymph node
intersection_of: UBERON:0000029 ! lymph node
intersection_of: part_of UBERON:0001264 ! pancreas

[Term]
id: UBERON:0002528
name: sacral lymph node
alt_id: UBERON:MA_0002883-FMA_16655
synonym: "Sacral node" EXACT [FMA:16655]
synonym: "sacral node" EXACT []
xref: FMA:16655 ! Sacral lymph node
xref: MA:0002883 ! sacral lymph node
is_a: UBERON:0000029 ! lymph node

[Term]
id: UBERON:0002529
name: limb segment
alt_id: UBERON:MA_0002889-FMA_9661
synonym: "Limb region" EXACT [FMA:9661]
synonym: "limb region" EXACT []
synonym: "Region of limb" EXACT [FMA:9661]
synonym: "region of limb" EXACT []
synonym: "Segment of limb" EXACT [FMA:9661]
synonym: "segment of limb" EXACT []
synonym: "Subdivision of limb" EXACT [FMA:9661]
synonym: "subdivision of limb" EXACT []
xref: FMA:9661 ! Limb segment
xref: MA:0002889 ! limb segment
intersection_of: UBERON:0000914 ! segment
intersection_of: part_of UBERON:0002101 ! limb
relationship: part_of UBERON:0002101 ! limb

[Term]
id: UBERON:0002530
name: gland
alt_id: UBERON:MIAA_0000021
def: "A gland is an organ in an animal's body that synthesizes a substance for release such as hormones or breast milk, often into the bloodstream (endocrine gland) or into cavities inside the body or its outer surface (exocrine gland). A gland is an organ specialised for secretion[GO]." [Wikipedia:Gland, WikiPedia:Gland]
comment: none of the major vertebrate ontologies have a class called gland. Is this superfluous?
subset: uberon_slim
xref: AAO:0000212 ! glands
xref: BTO:0000522
xref: EFO:0000797 ! gland
xref: EHDAA:2161 ! gland
xref: EHDAA:2181 ! gland
xref: EHDAA:2967 ! gland
xref: EHDAA:4475 ! gland
xref: EHDAA:6522 ! gland
xref: galen:Gland
xref: HAO:0000375 ! gland
xref: MAT:0000021 ! gland
xref: MIAA:0000021 ! gland
is_a: UBERON:0000061 ! anatomical structure
xref: FMA:71481 ! Set of glands
xref: FMA:86294 ! Gland
xref: ncithesaurus:Gland ! Gland

[Term]
id: UBERON:0002531
name: fin bud
alt_id: UBERON:MIAA_0000062-ZFA_0001383
comment: This class was created automatically from a combination of ontologies
xref: MAT:0000062 ! fin bud
xref: MIAA:0000062 ! fin bud
xref: TAO:0001383 ! fin bud
xref: ZFA:0001383 ! fin bud
is_a: UBERON:0002050 ! embryonic structure
is_a: UBERON:0003102 ! surface structure

[Term]
id: UBERON:0002532
name: epiblast
alt_id: UBERON:MIAA_0000067-ZFA_0000018
def: "The outer of the two layers of the blastoderm that form during gastrulation, corresponding to primitive ectoderm during gastrulation and to the definitive ectoderm after gastrulation. <a href='http://zfin.org/cgi-bin/ZFIN_jump?record=ZDB-PUB-961014-576'>Kimmel et al, 1995.</a>" [Wikipedia:Epiblast, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "blastocyst" RELATED []
xref: EHDAA:42 ! epiblast
xref: EHDAA:75 ! epiblast
xref: HOG:0000243 ! epiblast
xref: MAT:0000067 ! epiblast
xref: MIAA:0000067 ! epiblast
xref: TAO:0000018 ! epiblast
xref: ZFA:0000018 ! epiblast
is_a: UBERON:0002050 ! embryonic structure
relationship: part_of UBERON:0000091 ! bilaminar disc
relationship: part_of UBERON:0002541 ! germ ring
xref: ncithesaurus:Epiblast ! Epiblast

[Term]
id: UBERON:0002533
name: tail bud
alt_id: UBERON:MIAA_0000070-XAO_0000107-ZFA_0000077
def: "Rapidly proliferating mass of cells at the caudal extremity of the embryo. Its formation is reflected in a caudal carving of the posterior portion of the archenteric canal at NF stage 22. With its further outgrowth, the postanal gut primordium becomes stretched. Its lumen is in broad communication with the hindgut at NF stage 25." [ISBN:0815318960, OMD:tail+bud]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "tailbud" EXACT []
xref: EHDAA:1595 ! tail bud
xref: HOG:0000201 ! tail bud
xref: MAT:0000070 ! tail bud
xref: MIAA:0000070 ! tail bud
xref: TAO:0000077 ! tail bud
xref: XAO:0000107 ! tail bud
xref: ZFA:0000077 ! tail bud
is_a: UBERON:0002050 ! embryonic structure
relationship: part_of UBERON:0000922 ! embryo
xref: XAO:1000007 ! tailbud
xref: BTO:0001445 ! tail bud

[Term]
id: UBERON:0002534
name: fin
alt_id: UBERON:MIAA_0000087-XAO_0000002-ZFA_0000108
def: "used to produce lift and thrust or to steer while traveling in water, air, or other fluid media. The first use of the word was for the limbs of fish, but has been extended to include other animal limbs and man-made devices. Examples: teleost fin, tadpole fin." [Wikipedia:Fin]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "fins" RELATED []
xref: EFO:0000875 ! fin
xref: MAT:0000087 ! fin
xref: MIAA:0000087 ! fin
xref: OpenCyc:Mx4rvVjcBZwpEbGdrcN5Y29ycA
xref: TAO:0000108 ! fin
xref: XAO:0000002 ! fin
xref: ZFA:0000108 ! fin
is_a: UBERON:0003102 ! surface structure
relationship: develops_from UBERON:0002531 ! fin bud

[Term]
id: UBERON:0002535
name: gill
alt_id: UBERON:MIAA_0000134-XAO_0000120-ZFA_0000354
def: "Anatomical surface structure found in many aquatic organisms. It is a respiration organ whose function is the extraction of oxygen from water and the excretion of carbon dioxide. The microscopic structure of a gill is such that it presents a very large surface area to the external environment. Gills usually consist of thin filaments of tissue, branches, or slender tufted processes which have a highly folded surface to increase surface area. A high surface area is crucial to the gas exchange of aquatic organisms as water contains only 1/20 parts dissolved Oxygen compared to air. With the exception of some aquatic insects, the filaments and lamellae (folds) contain blood or coelomic fluid, from which gases are exchanged through the thin walls. Oxygen is carried by the blood to other parts of the body. Carbon dioxide passes from the blood through the thin gill tissue into the water. Gills or gill-like organs, located in different parts of the body, are found in various groups of aquatic animals, including mollusks, crustaceans, insects, fish, and amphibians." [Wikipedia:Gill]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "external gill" RELATED []
synonym: "gills" RELATED []
xref: BTO:0000518
xref: GAID:1218 ! gill
xref: HOG:0001214 ! gill
xref: MAT:0000134 ! gill
xref: MIAA:0000134 ! gill
xref: OpenCyc:Mx4rvVi9dZwpEbGdrcN5Y29ycA
xref: TAO:0000354 ! gill
xref: XAO:0000120 ! external gill
xref: ZFA:0000354 ! gill
is_a: UBERON:0003102 ! surface structure
relationship: part_of UBERON:0001004 ! respiratory system

[Term]
id: UBERON:0002536
name: arthropod sensillum
alt_id: UBERON:MIAA_0000163-WBbt_0006929
def: "Sense organ embedded in the integument and consisting of one or a cluster of sensory neurons and associated sensory structures, support cells and glial cells forming a single organised unit with a largely bona-fide boundary.[FBbt]" [FBbt:00007152, WB:rynl, Wikipedia:Sensillum]
subset: uberon_slim
synonym: "sensillum" EXACT [FBbt:00007152, HAO:0000933]
xref: BTO:0001237
xref: FBbt:00007152 ! sensillum
xref: HAO:0000933 ! sensillum
xref: MAT:0000163 ! sensillum
xref: MIAA:0000163 ! sensillum
is_a: UBERON:0000020 ! sense organ
relationship: part_of UBERON:0001016 ! nervous system

[Term]
id: UBERON:0002537
name: hermaphrodite gonad
alt_id: UBERON:MIAA_0000165-WBbt_0005178
def: "organ in hermaphrodite animal that produces both ova and sperm." [WB:rynl]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "ovotestis" RELATED []
xref: MAT:0000165 ! hermaphrodite gonad
xref: MIAA:0000165 ! hermaphrodite gonad
xref: WBbt:0005178 ! hermaphrodite gonad
is_a: UBERON:0000061 ! anatomical structure
is_a: UBERON:0000991 ! gonad
relationship: part_of UBERON:0000990 ! reproductive system

[Term]
id: UBERON:0002538
name: hatching gland
alt_id: UBERON:MIAA_0000180-XAO_0000034-ZFA_0000026
def: "A transversely oriented set of cells located deep to the EVL on the pericardial membrane, especially prominent during pharyngula period because of the brightly refractile cytoplasmic granules (containing hatching enzymes) of the principal cells of the gland. <a href='http://zfin.org/cgi-bin/ZFIN_jump?record=ZDB-PUB-961014-576'>Kimmel et al, 1995.</a>" [ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "frontal gland" RELATED []
synonym: "hgg" RELATED []
xref: BTO:0000558
xref: EFO:0000863 ! hatching gland
xref: HOG:0000078 ! hatching gland
xref: MAT:0000180 ! hatching gland
xref: MIAA:0000180 ! hatching gland
xref: TAO:0000026 ! hatching gland
xref: XAO:0000034 ! hatching gland
xref: ZFA:0000026 ! hatching gland
is_a: UBERON:0002050 ! embryonic structure
relationship: part_of UBERON:0000924 ! ectoderm

[Term]
id: UBERON:0002539
name: pharyngeal arch
alt_id: UBERON:MIAA_0000242-XAO_0000096-ZFA_0001306
def: "One of a series of bony or cartilaginous arches that develop in the walls of the mouth cavity and pharynx of the embryo." [NLM:branchial+arch, Wikipedia:Pharyngeal_arch]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "pharyngeal arches" RELATED []
synonym: "visceral arch" RELATED []
xref: HOG:0000155 ! pharyngeal arch
xref: MAT:0000242 ! pharyngeal arch
xref: MIAA:0000242 ! pharyngeal arch
xref: TAO:0001306 ! pharyngeal arch
xref: XAO:0000096 ! pharyngeal arch
xref: ZFA:0001306 ! pharyngeal arch
is_a: UBERON:0000481 ! multi-tissue structure
xref: ncithesaurus:Pharyngeal_Arch ! Pharyngeal Arch

[Term]
id: UBERON:0002540
name: lateral line system
alt_id: UBERON:MIAA_0000249-XAO_0000095-ZFA_0000034
def: "a line of neuroblasts along the sides of fish and amphibia that detect vibrations and pressure changes // Surface structure that has as it parts the sense organs that detect vibrations carried through water, develops during late tailbud stage, and persists in the adult bearing elaborate dorsal and ventral components. // A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.)" [ISBN:0471209627, ISBN:0815318960, Wikipedia:Lateral_line_system, ZFIN:curator]
comment: TODO - DV with CARO\nThis class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "lateral line stitches" RELATED []
synonym: "lateral-line organs" RELATED []
synonym: "ll" RELATED []
xref: AAO:0000269 ! lateral_line_system
xref: HOG:0001243 ! lateral line system
xref: MAT:0000249 ! lateral line system
xref: MIAA:0000249 ! lateral line system
xref: TAO:0000034 ! lateral line system
xref: XAO:0000095 ! lateral line system
xref: ZFA:0000034 ! lateral line system
is_a: UBERON:0001032 ! sense organ system
is_a: UBERON:0003102 ! surface structure

[Term]
id: UBERON:0002541
name: germ ring
alt_id: UBERON:MIAA_0000255-ZFA_0000111
comment: This class was created automatically from a combination of ontologies
xref: AAO:0000211 ! germ_ring
xref: MAT:0000255 ! germ ring
xref: MIAA:0000255 ! germ ring
xref: TAO:0000111 ! germ ring
xref: ZFA:0000111 ! germ ring
is_a: UBERON:0002050 ! embryonic structure

[Term]
id: UBERON:0002542
name: scale
alt_id: UBERON:MIAA_0000257-ZFA_0000277
def: "A small rigid plate that grows out of an animal's skin to provide protection. In lepidopteran (butterfly and moth) species, scales are plates on the surface of the insect wing, and provide coloration. Scales are quite common and have evolved multiple times with varying structure and function." [Wikipedia:Scale_(zoology)]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "scales" RELATED []
xref: HAO:0000907 ! scale
xref: MAT:0000257 ! scale
xref: MIAA:0000257 ! scale
xref: OpenCyc:Mx4rvVi9M5wpEbGdrcN5Y29ycA
xref: TAO:0000277 ! scale
xref: ZFA:0000277 ! scale
is_a: UBERON:0000021 ! cutaneous appendage
relationship: part_of UBERON:0002067 ! dermis
xref: ncithesaurus:Scale ! Scale

[Term]
id: UBERON:0002543
name: median fin skeleton
alt_id: UBERON:MIAA_0000277-ZFA_0001123
comment: This class was created automatically from a combination of ontologies
synonym: "axial fin skeleton" EXACT []
synonym: "unpaired fin skeleton" RELATED []
xref: MAT:0000277 ! median fin skeleton
xref: MIAA:0000277 ! median fin skeleton
xref: TAO:0001123 ! axial fin skeleton
xref: ZFA:0001123 ! axial fin skeleton
is_a: UBERON:0002090 ! axial skeleton

[Term]
id: UBERON:0002544
name: digit
alt_id: UBERON:MIAA_0000285-XAO_0003035-XAO_0003036
def: "." [Wikipedia:Digit_(anatomy)]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
xref: EFO:0000881 ! digit
xref: galen:Digit
xref: HOG:0000944 ! digits
xref: MA:0000690 ! limb digit
xref: MAT:0000285 ! digit
xref: MIAA:0000285 ! digit
is_a: UBERON:0000475 ! organism subdivision
xref: FMA:85518 ! Digit
xref: ncithesaurus:Digit ! Digit

[Term]
id: UBERON:0002545
name: body ganglion
alt_id: UBERON:MIAA_0000344-WBbt_0005332
comment: This class was created automatically from a combination of ontologies
synonym: "trunk ganglion" RELATED []
xref: EFO:0000901 ! body ganglion
xref: MAT:0000344 ! body ganglion
xref: MIAA:0000344 ! body ganglion
xref: WBbt:0005332 ! body ganglion
is_a: UBERON:0000045 ! ganglion

[Term]
id: UBERON:0002546
name: cranial placode
alt_id: UBERON:MIAA_0000369-XAO_0000305
comment: This class was created automatically from a combination of ontologies
synonym: "cranial placodes" RELATED []
synonym: "neurogenic placode" RELATED []
xref: MAT:0000369 ! cranial placode
xref: MIAA:0000369 ! cranial placode
xref: XAO:0000305 ! cranial placode
is_a: UBERON:0000061 ! anatomical structure
relationship: part_of UBERON:0000924 ! ectoderm

[Term]
id: UBERON:0002547
name: tadpole
alt_id: UBERON:MIAA_0000370-MIAA_0000400-XAO_1000008
def: "wholly aquatic larval stage in the life cycle of an amphibian, particularly of a frog or toad[WP]. XAO: The stages from feeding to the end of metamorphosis. Encompasses Weisz's first-form tadpole (equivalent to NF stages 45 to 49), second-form tadpole (NF 49 to 56) and third-form tadpole (NF 56 to 60-plus) stages." [ISBN:0471209627, ISSN:0003-276X, Wikipedia:Tadpole]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "tadpole stage" RELATED []
xref: BTO:0001347
xref: MAT:0000370 ! tadpole
xref: MIAA:0000370 ! tadpole
xref: XAO:1000008 ! tadpole
is_a: UBERON:0002548 ! larva

[Term]
id: UBERON:0002548
name: larva
alt_id: UBERON:MIAA_0000400-FBbt_00001727
def: "a distinct juvenile form many animals undergo before metamorphosis into adults. Animals with indirect development such as insects, amphibians, or cnidarians typically have a larval phase of their life cycle." [Wikipedia:Larva]
comment: This class was created automatically from a combination of ontologies. TODO: discriminate between stages and organisms
subset: uberon_slim
synonym: "planula" NARROW [Wikipedia:Larva]
synonym: "naupilus" NARROW [Wikipedia:Larva]
synonym: "zoea" NARROW [Wikipedia:Larva]
synonym: "nymph" NARROW [Wikipedia:Larva]
synonym: "naiad" NARROW [Wikipedia:Larva]
synonym: "caterpillar" NARROW [Wikipedia:Larva]
synonym: "grub" NARROW [Wikipedia:Larva]
synonym: "maggot" NARROW [Wikipedia:Larva]
synonym: "wriggler" NARROW [Wikipedia:Larva]
synonym: "trochophore" NARROW [Wikipedia:Larva]
synonym: "veliger" NARROW [Wikipedia:Larva]
synonym: "glochidium" NARROW [Wikipedia:Larva]
synonym: "ammocoete" NARROW [Wikipedia:Larva]
synonym: "leptocephalus" NARROW [Wikipedia:Larva]
synonym: "tadpole" NARROW [Wikipedia:Larva]
synonym: "bipinnaria" NARROW [Wikipedia:Larva]
xref: BTO:0000707
xref: FBbt:00001727 ! larva
xref: HAO:0000459 ! larva
xref: MIAA:0000400 ! larval stage
is_a: UBERON:0000061 ! anatomical structure
relationship: existence_starts_and_ends_during UBERON:0000069 ! larval stage
intersection_of: UBERON:0000061 ! anatomical structure
intersection_of: existence_starts_and_ends_during UBERON:0000069 ! larval stage

[Term]
id: UBERON:0002549
name: ventral trigeminal tract
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1001-FMA_72506
def: "." [Wikipedia:Ventral_trigeminal_tract]
subset: uberon_slim
synonym: "anterior trigeminothalamic tract" EXACT [FMA:72506]
synonym: "trigeminal lemniscus-2" EXACT [FMA:72506]
synonym: "ventral crossed tract" EXACT [FMA:72506]
synonym: "ventral secondary ascending tract of V" EXACT [FMA:72506]
synonym: "ventral secondary ascending tract of v" EXACT []
synonym: "ventral trigeminal pathway" EXACT [FMA:72506]
synonym: "ventral trigeminothalamic tract" EXACT [FMA:72506]
xref: FMA:72506 ! Ventral trigeminal tract
xref: NIF_GrossAnatomy:birnlex_1001 ! Ventral trigeminal tract
is_a: UBERON:0002316 ! white matter of neuraxis

[Term]
id: UBERON:0002550
name: anterior hypothalamic region
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1005-FMA_62027
synonym: "chiasmal zone" EXACT [FMA:62027]
xref: FMA:62027 ! Anterior hypothalamic region
xref: NIF_GrossAnatomy:birnlex_1005 ! Anterior hypothalamic region
is_a: UBERON:0000477 ! anatomical cluster
relationship: part_of UBERON:0001898 ! hypothalamus

[Term]
id: UBERON:0002551
name: interstitial nucleus of cajal
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1008-FMA_72432
synonym: "interstitial nucleus" EXACT [FMA:72432]
synonym: "interstitial nucleus of Cajal" EXACT [FMA:72432]
synonym: "interstitial nucleus of medial longitudinal fasciculus (Crosby)" EXACT [FMA:72432]
synonym: "interstitial nucleus of medial longitudinal fasciculus (crosby)" EXACT []
xref: FMA:72432 ! Interstitial nucleus of medial longitudinal fasciculus
xref: NIF_GrossAnatomy:birnlex_1008 ! Interstitial nucleus of Cajal
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0001943 ! midbrain tegmentum

[Term]
id: UBERON:0002552
name: vestibulocerebellar tract
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1009-FMA_72508
def: "." [Wikipedia:Vestibulocerebellar_tract]
subset: uberon_slim
synonym: "vestibulocerebellar fibers" EXACT [FMA:72508]
xref: FMA:72508 ! Vestibulocerebellar tract
xref: NIF_GrossAnatomy:birnlex_1009 ! Vestibulocerebellar tract
is_a: UBERON:0002316 ! white matter of neuraxis

[Term]
id: UBERON:0002553
name: anatomical cavity
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1011-FMA_67552
def: "Anatomical space which contains portions of one or more body substances and is bounded by the internal surface of one maximally connected anatomical structure. Examples: cranial cavity, pharyngeal recess space, nasal cavity, tooth socket, cavity of serous sac, lumen of stomach, lumen of artery, fornix of vagina.\"" [FMA:67552]
synonym: "cavity" EXACT []
xref: FMA:67552 ! Anatomical cavity
xref: NIF_GrossAnatomy:birnlex_1011 ! Anatomical cavity
is_a: UBERON:0000464 ! anatomical space
relationship: location_of UBERON:0000463 ! portion of organism substance

[Term]
id: UBERON:0002554
name: regional part of superior colliculus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1014-FMA_85592
synonym: "segment of superior colliculus" EXACT [NIF_GrossAnatomy:birnlex_1014]
synonym: "superior colliculus segment" EXACT [FMA:85592]
xref: FMA:85592 ! Segment of superior colliculus
xref: NIF_GrossAnatomy:birnlex_1014 ! Regional part of superior colliculus
is_a: UBERON:0002966 ! regional part of midbrain tectum
intersection_of: UBERON:0002616 ! regional part of brain
intersection_of: part_of UBERON:0001945 ! superior colliculus

[Term]
id: UBERON:0002555
name: intermediate hypothalamic region
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1015-FMA_62028
synonym: "intermediate hypothalamic area" EXACT [FMA:62028]
xref: FMA:62028 ! Intermediate hypothalamic region
xref: NIF_GrossAnatomy:birnlex_1015 ! Intermediate hypothalamic region
is_a: UBERON:0000477 ! anatomical cluster
relationship: has_part UBERON:0001932 ! arcuate nucleus of hypothalamus
relationship: has_part UBERON:0001933 ! retrochiasmatic area
relationship: has_part UBERON:0001934 ! dorsomedial nucleus of hypothalamus
relationship: has_part UBERON:0001935 ! ventromedial nucleus of hypothalamus
relationship: part_of UBERON:0001898 ! hypothalamus

[Term]
id: UBERON:0002556
name: corticotectal tract
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1016-FMA_72419
synonym: "corticotectal fibers" EXACT [FMA:72419]
synonym: "corticotectal fibres" EXACT [FMA:72419]
xref: FMA:72419 ! Corticotectal tract
xref: NIF_GrossAnatomy:birnlex_1016 ! Corticotectal tract
is_a: UBERON:0002316 ! white matter of neuraxis

[Term]
id: UBERON:0002557
name: linear nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1018-FMA_72436
xref: FMA:72436 ! Linear nucleus
xref: NIF_GrossAnatomy:birnlex_1018 ! Linear nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0001943 ! midbrain tegmentum

[Term]
id: UBERON:0002558
name: organ cavity
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1019-FMA_12237
synonym: "cavity of organ" EXACT [FMA:12237]
xref: FMA:12237 ! Organ cavity
xref: NIF_GrossAnatomy:birnlex_1019 ! Organ cavity
is_a: UBERON:0002553 ! anatomical cavity

[Term]
id: UBERON:0002559
name: medullary reticular formation
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1020-FMA_72241
synonym: "bulbar reticular formation" EXACT [FMA:72241]
synonym: "reticular formation of medulla" EXACT [FMA:72241]
xref: FMA:72241 ! Medullary reticular formation
xref: NIF_GrossAnatomy:birnlex_1020 ! Medullary reticular formation
is_a: UBERON:0002275 ! reticular formation
intersection_of: UBERON:0002275 ! reticular formation
intersection_of: part_of UBERON:0000958 ! medulla

[Term]
id: UBERON:0002560
name: temporal operculum
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1025-FMA_74891
synonym: "facies supratemporalis" EXACT [FMA:74891]
xref: FMA:74891 ! Temporal operculum
xref: NIF_GrossAnatomy:birnlex_1025 ! Temporal operculum
is_a: UBERON:0000477 ! anatomical cluster

[Term]
id: UBERON:0002561
name: neuraxis cavity
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1029-FMA_75007
synonym: "cavity of ventricular system of neuraxis" EXACT [FMA:75007]
synonym: "neuraxis cavity" EXACT [FMA:75007]
xref: FMA:75007 ! Cavity of neuraxis
xref: NIF_GrossAnatomy:birnlex_1029 ! Neuraxis cavity
is_a: UBERON:0002558 ! organ cavity

[Term]
id: UBERON:0002562
name: superior frontal sulcus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1030-FMA_83755
def: "." [Wikipedia:Superior_frontal_sulcus]
subset: uberon_slim
synonym: "sulcus f1" EXACT [FMA:83755]
synonym: "superior frontal fissure" EXACT [FMA:83755]
xref: FMA:83755 ! Superior frontal sulcus
xref: NIF_GrossAnatomy:birnlex_1030 ! Superior frontal sulcus
is_a: UBERON:0000093 ! sulcus
xref: ncithesaurus:Superior_Frontal_Sulcus ! Superior Frontal Sulcus

[Term]
id: UBERON:0002563
name: central nucleus of inferior colliculus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1035-FMA_72413
synonym: "chief nucleus of inferior colliculus" EXACT [FMA:72413]
synonym: "inferior colliculus, central nucleus" EXACT [FMA:72413]
synonym: "nucleus of inferior colliculus (Crosby)" EXACT [FMA:72413]
synonym: "nucleus of inferior colliculus (crosby)" EXACT []
xref: FMA:72413 ! Central nucleus of inferior colliculus
xref: NIF_GrossAnatomy:birnlex_1035 ! Central nucleus of inferior colliculus
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0001946 ! inferior colliculus

[Term]
id: UBERON:0002564
name: lateral orbital gyrus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1036-FMA_62418
xref: FMA:62418 ! Lateral orbital gyrus
xref: NIF_GrossAnatomy:birnlex_1036 ! Lateral orbital gyrus
is_a: UBERON:0000200 ! gyrus

[Term]
id: UBERON:0002565
name: olivary pretectal nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1037-FMA_72405
def: "." [Wikipedia:Olivary_pretectal_nucleus]
subset: uberon_slim
synonym: "anterior pretectal nucleus" EXACT [FMA:72405]
synonym: "olivary nucleus of superior colliculus" EXACT [FMA:72405]
synonym: "pretectal olivary nucleus" EXACT [FMA:72405]
xref: FMA:72405 ! Olivary pretectal nucleus
xref: NIF_GrossAnatomy:birnlex_1037 ! Olivary pretectal nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0001944 ! pretectal region

[Term]
id: UBERON:0002566
name: superior precentral sulcus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1038-FMA_83763
synonym: "precentral dimple" EXACT [FMA:83763]
synonym: "superior part of precentral fissure" EXACT [FMA:83763]
xref: FMA:83763 ! Superior precentral sulcus
xref: NIF_GrossAnatomy:birnlex_1038 ! Superior precentral sulcus
is_a: UBERON:0000093 ! sulcus

[Term]
id: UBERON:0002567
name: basal part of pons
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1043-FMA_72244
synonym: "basal portion of pons" EXACT [FMA:72244]
synonym: "base of pons" EXACT [FMA:72244]
synonym: "basilar part of pons" EXACT [FMA:72244]
synonym: "pons proper" EXACT [FMA:72244]
synonym: "ventral portion of pons" EXACT [FMA:72244]
xref: FMA:72244 ! Basal part of pons
xref: NIF_GrossAnatomy:birnlex_1043 ! Basal part of pons
is_a: UBERON:0000477 ! anatomical cluster
relationship: has_part UBERON:0002152 ! middle cerebellar peduncle
relationship: part_of UBERON:0000988 ! pons

[Term]
id: UBERON:0002568
name: amiculum of dentate nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1044-FMA_72546
synonym: "dentate nuclear amiculum" EXACT [FMA:72546]
xref: FMA:72546 ! Amiculum of dentate nucleus
xref: NIF_GrossAnatomy:birnlex_1044 ! Amiculum of dentate nucleus
is_a: UBERON:0002316 ! white matter of neuraxis
relationship: part_of UBERON:0002132 ! dentate nucleus

[Term]
id: UBERON:0002569
name: transverse temporal sulcus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1045-FMA_83782
xref: FMA:83782 ! Transverse temporal sulcus
xref: NIF_GrossAnatomy:birnlex_1045 ! Transverse temporal sulcus
is_a: UBERON:0000093 ! sulcus

[Term]
id: UBERON:0002570
name: medial orbital gyrus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1046-FMA_62419
xref: FMA:62419 ! Medial orbital gyrus
xref: NIF_GrossAnatomy:birnlex_1046 ! Medial orbital gyrus
is_a: UBERON:0000200 ! gyrus

[Term]
id: UBERON:0002571
name: external nucleus of inferior colliculus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1047-FMA_72412
xref: FMA:72412 ! External nucleus of inferior colliculus
xref: NIF_GrossAnatomy:birnlex_1047 ! External nucleus of inferior colliculus
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0001946 ! inferior colliculus

[Term]
id: UBERON:0002572
name: principal pretectal nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1048-FMA_72402
xref: FMA:72402 ! Principal pretectal nucleus
xref: NIF_GrossAnatomy:birnlex_1048 ! Principal pretectal nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0001944 ! pretectal region

[Term]
id: UBERON:0002573
name: pontine reticular formation
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1050-FMA_68876
def: "." [Wikipedia:Pontine_reticular_formation]
subset: uberon_slim
synonym: "reticular formation of pons" EXACT [FMA:68876]
xref: FMA:68876 ! Pontine reticular formation
xref: NIF_GrossAnatomy:birnlex_1050 ! Pontine reticular formation
is_a: UBERON:0002275 ! reticular formation
intersection_of: UBERON:0002275 ! reticular formation
intersection_of: part_of UBERON:0000988 ! pons

[Term]
id: UBERON:0002574
name: regional part of inferior olivary complex
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1052-FMA_71259
synonym: "inferior olivary complex segment" EXACT [FMA:71259]
synonym: "segment of inferior olivary complex" EXACT [NIF_GrossAnatomy:birnlex_1052]
xref: FMA:71259 ! Segment of inferior olivary complex
xref: NIF_GrossAnatomy:birnlex_1052 ! Regional part of inferior olivary complex
is_a: UBERON:0002678 ! regional part of medulla oblongata
intersection_of: UBERON:0002616 ! regional part of brain
intersection_of: part_of UBERON:0002127 ! inferior olivary complex

[Term]
id: UBERON:0002575
name: posterior orbital gyrus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1054-FMA_80184
xref: FMA:80184 ! Posterior orbital gyrus
xref: NIF_GrossAnatomy:birnlex_1054 ! Posterior orbital gyrus
is_a: UBERON:0000200 ! gyrus

[Term]
id: UBERON:0002576
name: temporal pole
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1055-FMA_74890
def: "." [Wikipedia:Temporal_pole]
subset: uberon_slim
xref: FMA:74890 ! Temporal pole
xref: NIF_GrossAnatomy:birnlex_1055 ! Temporal pole
is_a: UBERON:0000477 ! anatomical cluster

[Term]
id: UBERON:0002577
name: pericentral nucleus of inferior colliculus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1056-FMA_72411
synonym: "cortex of inferior colliculus" EXACT [FMA:72411]
xref: FMA:72411 ! Pericentral nucleus of inferior colliculus
xref: NIF_GrossAnatomy:birnlex_1056 ! Pericentral nucleus of inferior colliculus
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0001946 ! inferior colliculus

[Term]
id: UBERON:0002578
name: sublentiform nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1057-FMA_72404
xref: FMA:72404 ! Sublentiform nucleus
xref: NIF_GrossAnatomy:birnlex_1057
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0001944 ! pretectal region

[Term]
id: UBERON:0002579
name: regional part of medullary reticular formation
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1060-FMA_73730
synonym: "medullary reticular formation segment" EXACT [FMA:73730]
synonym: "segment of medullary reticular formation" EXACT [NIF_GrossAnatomy:birnlex_1060]
xref: FMA:73730 ! Segment of medullary reticular formation
xref: NIF_GrossAnatomy:birnlex_1060 ! Regional part of medullary reticular formation
is_a: UBERON:0002678 ! regional part of medulla oblongata
intersection_of: UBERON:0002616 ! regional part of brain
intersection_of: part_of UBERON:0002559 ! medullary reticular formation

[Term]
id: UBERON:0002580
name: brachium of superior colliculus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1065-FMA_72417
def: "." [Wikipedia:Brachium_of_superior_colliculus]
subset: uberon_slim
synonym: "superior brachium" EXACT [FMA:72417]
synonym: "superior collicular brachium" EXACT [FMA:72417]
synonym: "superior colliculus brachium" EXACT [FMA:72417]
synonym: "superior quadrigeminal brachium" EXACT [FMA:72417]
xref: FMA:72417 ! Brachium of superior colliculus
xref: NIF_GrossAnatomy:birnlex_1065 ! Brachium of superior colliculus
is_a: UBERON:0002316 ! white matter of neuraxis
relationship: part_of UBERON:0001945 ! superior colliculus

[Term]
id: UBERON:0002581
name: postcentral gyrus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1070-FMA_61896
def: "." [Wikipedia:Postcentral_gyrus]
subset: uberon_slim
synonym: "postcentral convolution" EXACT [FMA:61896]
synonym: "posterior central gyrus" EXACT [FMA:61896]
synonym: "postrolandic gyrus" EXACT [FMA:61896]
xref: FMA:61896 ! Postcentral gyrus
xref: NIF_GrossAnatomy:birnlex_1070 ! Postcentral gyrus
is_a: UBERON:0000200 ! gyrus
relationship: part_of UBERON:0001872 ! parietal lobe
xref: ncithesaurus:Postcentral_Gyrus ! Postcentral Gyrus

[Term]
id: UBERON:0002582
name: anterior calcarine sulcus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1072-FMA_83750
synonym: "anterior calcarine fissure" EXACT [FMA:83750]
xref: FMA:83750 ! Anterior calcarine sulcus
xref: NIF_GrossAnatomy:birnlex_1072 ! Anterior calcarine sulcus
is_a: UBERON:0000093 ! sulcus

[Term]
id: UBERON:0002583
name: commissure of superior colliculus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1073-FMA_72418
synonym: "commissure of superior colliculi" EXACT [FMA:72418]
synonym: "superior colliculus commissure" EXACT [FMA:72418]
xref: FMA:72418 ! Commissure of superior colliculus
xref: NIF_GrossAnatomy:birnlex_1073 ! Commissure of superior colliculus
is_a: UBERON:0001020 ! commissure
intersection_of: UBERON:0001020 ! commissure
intersection_of: part_of UBERON:0001945 ! superior colliculus
relationship: part_of UBERON:0001945 ! superior colliculus

[Term]
id: UBERON:0002584
name: regional part of vestibular nuclear complex
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1080-FMA_71267
synonym: "segment of vestibular nuclear complex" EXACT [NIF_GrossAnatomy:birnlex_1080]
synonym: "vestibular nuclear complex segment" EXACT [FMA:71267]
xref: FMA:71267 ! Segment of vestibular nuclear complex
xref: NIF_GrossAnatomy:birnlex_1080 ! Regional part of vestibular nuclear complex
is_a: UBERON:0002678 ! regional part of medulla oblongata
intersection_of: UBERON:0002616 ! regional part of brain
intersection_of: part_of UBERON:0002673 ! vestibular nuclear complex

[Term]
id: UBERON:0002585
name: central tegmental tract of midbrain
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1081-FMA_72456
xref: FMA:72456 ! Central tegmental tract of midbrain
xref: NIF_GrossAnatomy:birnlex_1081 ! Central tegmental tract of midbrain
is_a: UBERON:0002316 ! white matter of neuraxis
relationship: part_of UBERON:0001943 ! midbrain tegmentum

[Term]
id: UBERON:0002586
name: calcarine sulcus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1086-FMA_83749
def: "." [Wikipedia:Calcarine_sulcus]
subset: uberon_slim
synonym: "calcarine fissure" EXACT [FMA:83749]
xref: FMA:83749 ! Calcarine sulcus
xref: NIF_GrossAnatomy:birnlex_1086 ! Calcarine sulcus
is_a: UBERON:0000093 ! sulcus
xref: ncithesaurus:Calcarine_Sulcus ! Calcarine Sulcus

[Term]
id: UBERON:0002587
name: nucleus subceruleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1088-FMA_72479
synonym: "subcaerulean nucleus" EXACT [FMA:72479]
xref: FMA:72479 ! Nucleus subceruleus
xref: NIF_GrossAnatomy:birnlex_1088 ! Nucleus subceruleus
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0002588
name: decussation of superior cerebellar peduncle
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1089-FMA_72455
def: "." [Wikipedia:Decussation_of_superior_cerebellar_peduncle]
subset: uberon_slim
synonym: "decussation of brachium conjunctivum" EXACT [FMA:72455]
synonym: "decussation of superior cerebellar peduncles" EXACT [FMA:72455]
synonym: "superior cerebellar peduncle decussation" EXACT [FMA:72455]
synonym: "wernekink's decussation" EXACT [FMA:72455]
xref: FMA:72455 ! Decussation of superior cerebellar peduncle
xref: NIF_GrossAnatomy:birnlex_1089 ! Decussation of superior cerebellar peduncle
is_a: UBERON:0002316 ! white matter of neuraxis
relationship: part_of UBERON:0001943 ! midbrain tegmentum

[Term]
id: UBERON:0002589
name: lateral corticospinal tract
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1095-FMA_72635
def: "." [Wikipedia:Lateral_corticospinal_tract]
subset: uberon_slim
synonym: "lateral pyramidal tract" EXACT [FMA:72635]
xref: FMA:72635 ! Lateral corticospinal tract
xref: NIF_GrossAnatomy:birnlex_1095 ! Lateral corticospinal tract
is_a: UBERON:0002316 ! white matter of neuraxis
relationship: part_of UBERON:0001896 ! medulla oblongata

[Term]
id: UBERON:0002590
name: prepyriform area
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1097-FMA_62484
synonym: "lateral olfactory gyrus" EXACT [FMA:62484]
synonym: "piriform cortex (Price)" EXACT [FMA:62484]
synonym: "piriform cortex (price)" EXACT []
synonym: "prepiriform cortex" EXACT [FMA:62484]
synonym: "prepyriform cortex" EXACT [FMA:62484]
xref: FMA:62484 ! Prepyriform area
xref: NIF_GrossAnatomy:birnlex_1097 ! Prepyriform area
is_a: UBERON:0000064 ! organ part

[Term]
id: UBERON:0002591
name: oral part of spinal trigeminal nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1100-FMA_235322
xref: FMA:235322 ! Oral part of spinal trigeminal nucleus
xref: NIF_GrossAnatomy:birnlex_1100 ! Oral part of spinal trigeminal nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis
relationship: part_of UBERON:0001717 ! spinal nucleus of trigeminal nerve

[Term]
id: UBERON:0002592
name: juxtarestiform body
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1101-FMA_72613
def: "." [Wikipedia:Juxtarestiform_body]
subset: uberon_slim
xref: FMA:72613 ! Juxtarestiform body
xref: NIF_GrossAnatomy:birnlex_1101 ! Juxtarestiform body
is_a: UBERON:0002316 ! white matter of neuraxis
relationship: part_of UBERON:0001896 ! medulla oblongata

[Term]
id: UBERON:0002593
name: orbital operculum
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1102-FMA_74887
xref: FMA:74887 ! Orbital operculum
xref: NIF_GrossAnatomy:birnlex_1102 ! Orbital operculum
is_a: UBERON:0000477 ! anatomical cluster

[Term]
id: UBERON:0002594
name: dentatothalamic tract
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1104-FMA_72462
def: "." [Wikipedia:Dentatothalamic_tract]
subset: uberon_slim
synonym: "dentatothalamic fibers" EXACT [FMA:72462]
xref: FMA:72462 ! Dentatothalamic tract
xref: NIF_GrossAnatomy:birnlex_1104 ! Dentatothalamic tract
is_a: UBERON:0002316 ! white matter of neuraxis
relationship: part_of UBERON:0001943 ! midbrain tegmentum

[Term]
id: UBERON:0002595
name: orbital sulcus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1112-FMA_83770
synonym: "orbital sulci" EXACT [FMA:83770]
xref: FMA:83770 ! Orbital sulcus
xref: NIF_GrossAnatomy:birnlex_1112 ! Orbital sulcus
is_a: UBERON:0000093 ! sulcus
xref: ncithesaurus:Orbital_Sulcus ! Orbital Sulcus

[Term]
id: UBERON:0002596
name: ventral posterior nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1116-FMA_62187
def: "." [Wikipedia:Ventral_posterior_nucleus]
subset: uberon_slim
synonym: "ventral posterior thalamic nucleus" EXACT [FMA:62187]
synonym: "ventrobasal complex" EXACT [FMA:62187]
synonym: "ventrobasal nucleus" EXACT [FMA:62187]
xref: FMA:62187 ! Ventral posterior nucleus
xref: NIF_GrossAnatomy:birnlex_1116 ! Ventral posterior nucleus
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0002597
name: principal sensory nucleus of trigeminal nerve
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1120-FMA_54533
def: "." [Wikipedia:Chief_sensory_nucleus]
subset: uberon_slim
synonym: "chief sensory nucleus" EXACT [FMA:54533]
synonym: "main sensory nucleus" EXACT [FMA:54533]
synonym: "main sensory nucleus of cranial nerve V" EXACT [FMA:54533]
synonym: "main sensory nucleus of cranial nerve v" EXACT []
synonym: "pontine nucleus" EXACT [GO:0021740]
synonym: "principal sensory trigeminal nucleus" EXACT [FMA:54533]
synonym: "principal trigeminal nucleus" EXACT [FMA:54533]
synonym: "superior trigeminal nucleus" EXACT [FMA:54533]
synonym: "superior trigeminal sensory nucleus" EXACT [FMA:54533]
synonym: "trigeminal nerve superior sensory nucleus" EXACT [FMA:54533]
xref: FMA:54533 ! Principal sensory nucleus of trigeminal nerve
xref: NIF_GrossAnatomy:birnlex_1120 ! Principal sensory nucleus of trigeminal nerve
is_a: UBERON:0000126 ! cranial nerve nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0001645 ! trigeminal nerve
xref: BTO:0003396 ! pontine nucleus

[Term]
id: UBERON:0002598
name: paracentral sulcus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1121-FMA_83762
xref: FMA:83762 ! Paracentral sulcus
xref: NIF_GrossAnatomy:birnlex_1121 ! Paracentral sulcus
is_a: UBERON:0000093 ! sulcus

[Term]
id: UBERON:0002599
name: medial olfactory gyrus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1127-FMA_74509
xref: FMA:74509 ! Medial olfactory gyrus
xref: NIF_GrossAnatomy:birnlex_1127 ! Medial olfactory gyrus
is_a: UBERON:0000200 ! gyrus

[Term]
id: UBERON:0002600
name: limbic lobe
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1128-FMA_72719
def: "." [Wikipedia:Limbic_lobe]
subset: uberon_slim
synonym: "fornicate gyrus" EXACT [FMA:72719]
synonym: "grande lobe limbique of Broca" EXACT [FMA:72719]
synonym: "grande lobe limbique of broca" EXACT []
synonym: "limbic lobe (Carpenter)" EXACT [FMA:72719]
synonym: "limbic lobe (carpenter)" EXACT []
xref: FMA:72719 ! Limbic lobe
xref: NIF_GrossAnatomy:birnlex_1128 ! Limbic lobe
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0000956 ! cerebral cortex

[Term]
id: UBERON:0002601
name: fasciolar gyrus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1129-FMA_61921
synonym: "retrosplenial gyrus of hippocampus" EXACT [FMA:61921]
xref: FMA:61921 ! Fasciolar gyrus
xref: NIF_GrossAnatomy:birnlex_1129 ! Fasciolar gyrus
is_a: UBERON:0000200 ! gyrus
xref: BTO:0002497 ! fasciolar gyrus

[Term]
id: UBERON:0002602
name: emboliform nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1135-FMA_72538
def: "." [Wikipedia:Emboliform_nucleus]
subset: uberon_slim
synonym: "anterior interposed nucleus" EXACT [FMA:72538]
synonym: "anterior interpositus nucleus" EXACT [FMA:72538]
xref: FMA:72538 ! Emboliform nucleus
xref: NIF_GrossAnatomy:birnlex_1135 ! Emboliform nucleus
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0002037 ! cerebellum

[Term]
id: UBERON:0002603
name: paraterminal gyrus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1138-FMA_61919
def: "." [Wikipedia:Paraterminal_gyrus]
subset: uberon_slim
synonym: "precommissural hippocampus" EXACT [FMA:61919]
synonym: "subcallosal gyrus" EXACT [FMA:61919]
xref: FMA:61919 ! Paraterminal gyrus
xref: NIF_GrossAnatomy:birnlex_1138 ! Paraterminal gyrus
is_a: UBERON:0002665 ! supracallosal gyrus

[Term]
id: UBERON:0002604
name: ventral nucleus of lateral lemniscus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1140-FMA_72484
def: "." [Wikipedia:Ventral_nucleus_of_the_lateral_lemniscus]
subset: uberon_slim
synonym: "anterior nucleus of lateral lemniscus" EXACT [FMA:72484]
synonym: "ventral nucleus of the lateral lemniscus" EXACT [FMA:72484]
xref: FMA:72484 ! Ventral nucleus of lateral lemniscus
xref: NIF_GrossAnatomy:birnlex_1140 ! Ventral nucleus of lateral lemniscus
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0002605
name: precentral operculum
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1141-FMA_74888
xref: FMA:74888 ! Precentral operculum
xref: NIF_GrossAnatomy:birnlex_1141 ! Precentral operculum
is_a: UBERON:0000477 ! anatomical cluster

[Term]
id: UBERON:0002606
name: neuropil
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1142-FMA_261269
def: "A dense intricate feltwork of interwoven fine glial processes, fibrils, synaptic terminals, axons, and dendrites interspersed among the nerve cells in the gray matter of the central nervous system (MSH). A region between neuronal cell bodies in the gray matter of the brain and spinal cord (i.e. the central nervous system). It consists of a dense tangle of axon terminals, dendrites and glial cell processes. It is where synaptic connections are formed between branches of axons and dendrites." [Wikipedia:Neuropil]
subset: uberon_slim
xref: FMA:261269 ! Neuropil
xref: NIF_GrossAnatomy:birnlex_1142
is_a: UBERON:0000477 ! anatomical cluster
xref: ncithesaurus:Neuropil ! Neuropil

[Term]
id: UBERON:0002607
name: superior rostral sulcus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1143-FMA_83766
xref: FMA:83766 ! Superior rostral sulcus
xref: NIF_GrossAnatomy:birnlex_1143 ! Superior rostral sulcus
is_a: UBERON:0000093 ! sulcus

[Term]
id: UBERON:0002608
name: caudal part of ventral lateral nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1144-FMA_62194
synonym: "dorsal part of ventral lateral posterior nucleus (Jones)" EXACT [FMA:62194]
synonym: "dorsal part of ventral lateral posterior nucleus (jones)" EXACT []
synonym: "ventral lateral nucleus, caudal part" EXACT [FMA:62194]
synonym: "ventral lateral thalamic nucleus, caudal part" EXACT [FMA:62194]
xref: FMA:62194 ! Caudal part of ventral lateral nucleus
xref: NIF_GrossAnatomy:birnlex_1144 ! Caudal part of ventral lateral nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis
relationship: part_of UBERON:0001925 ! ventral lateral nucleus

[Term]
id: UBERON:0002609
name: spinothalamic tract of midbrain
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1150-FMA_72463
xref: FMA:72463 ! Spinothalamic tract of midbrain
xref: NIF_GrossAnatomy:birnlex_1150 ! Spinothalamic tract of midbrain
is_a: UBERON:0002316 ! white matter of neuraxis
relationship: part_of UBERON:0001943 ! midbrain tegmentum

[Term]
id: UBERON:0002610
name: cochlear nuclear complex
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1151-FMA_72240
def: "." [Wikipedia:Cochlear_nuclei]
subset: uberon_slim
synonym: "cochlear nuclei" EXACT [FMA:72240]
xref: FMA:72240 ! Cochlear nuclear complex
xref: NIF_GrossAnatomy:birnlex_1151 ! Cochlear nuclear complex
is_a: UBERON:0002020 ! gray matter of neuraxis
relationship: part_of UBERON:0001896 ! medulla oblongata
xref: ncithesaurus:Cochlear_Nuclei ! Cochlear Nuclei

[Term]
id: UBERON:0002611
name: node of ranvier
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1152-FMA_67368
def: "." [Wikipedia:Node_of_ranvier]
subset: uberon_slim
synonym: "ranvier node" EXACT [FMA:67368]
synonym: "ranvier's node" EXACT [FMA:67368]
xref: FMA:67368 ! Node of Ranvier
xref: NIF_GrossAnatomy:birnlex_1152
is_a: UBERON:0000061 ! anatomical structure
xref: ncithesaurus:Node_of_Ranvier ! Node of Ranvier

[Term]
id: UBERON:0002612
name: transverse orbital sulcus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1155-FMA_83771
xref: FMA:83771 ! Transverse orbital sulcus
xref: NIF_GrossAnatomy:birnlex_1155 ! Transverse orbital sulcus
is_a: UBERON:0000093 ! sulcus

[Term]
id: UBERON:0002613
name: globose nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1158-FMA_72536
def: "." [Wikipedia:Globose_nucleus]
subset: uberon_slim
synonym: "posterior interposed nucleus" EXACT [FMA:72536]
synonym: "posterior interpositus nucleus" EXACT [FMA:72536]
xref: FMA:72536 ! Globose nucleus
xref: NIF_GrossAnatomy:birnlex_1158 ! Globose nucleus
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0002037 ! cerebellum

[Term]
id: UBERON:0002614
name: medial part of ventral lateral nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1159-FMA_62195
synonym: "ventral lateral nucleus, medial part" EXACT [FMA:62195]
synonym: "ventral medial nucleus" EXACT [FMA:62195]
xref: FMA:62195 ! Medial part of ventral lateral nucleus
xref: NIF_GrossAnatomy:birnlex_1159 ! Medial part of ventral lateral nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis
relationship: part_of UBERON:0001925 ! ventral lateral nucleus

[Term]
id: UBERON:0002615
name: ventral tegmental decussation
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1163-FMA_72452
synonym: "anterior tegmental decussation" EXACT [FMA:72452]
synonym: "decussation of Forel" EXACT [FMA:72452]
synonym: "decussation of forel" EXACT []
synonym: "ventral tegmental decussation of Forel" EXACT [FMA:72452]
synonym: "ventral tegmental decussation of forel" EXACT []
xref: FMA:72452 ! Ventral tegmental decussation
xref: NIF_GrossAnatomy:birnlex_1163 ! Ventral tegmental decussation
is_a: UBERON:0002316 ! white matter of neuraxis
relationship: part_of UBERON:0001943 ! midbrain tegmentum

[Term]
id: UBERON:0002616
name: regional part of brain
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1167-FMA_55676
synonym: "neuraxis segment" EXACT [FMA:55676]
synonym: "segment of brain" EXACT [NIF_GrossAnatomy:birnlex_1167]
xref: FMA:55676 ! Segment of brain
xref: NIF_GrossAnatomy:birnlex_1167 ! Regional part of brain
is_a: UBERON:0000073 ! regional part of nervous system
intersection_of: UBERON:0000061 ! anatomical structure
intersection_of: part_of UBERON:0000955 ! brain

[Term]
id: UBERON:0002617
name: pars postrema of ventral lateral nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1170-FMA_62196
synonym: "posterodorsal part of ventral lateral posterior nucleus (Jones)" EXACT [FMA:62196]
synonym: "posterodorsal part of ventral lateral posterior nucleus (jones)" EXACT []
synonym: "ventral lateral nucleus (pars postrema)" EXACT [FMA:62196]
xref: FMA:62196 ! Pars postrema of ventral lateral nucleus
xref: NIF_GrossAnatomy:birnlex_1170 ! Pars postrema of ventral lateral nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis
relationship: part_of UBERON:0001925 ! ventral lateral nucleus

[Term]
id: UBERON:0002618
name: trochlear nerve fibers
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1172-FMA_71116
synonym: "central part of trochlear nerve" EXACT [FMA:71116]
synonym: "trochlear nerve fibers" EXACT [FMA:71116]
synonym: "trochlear nerve root" EXACT [FMA:71116]
xref: FMA:71116 ! Trochlear nerve tract
xref: NIF_GrossAnatomy:birnlex_1172 ! Trochlear nerve fibers
is_a: UBERON:0002211 ! segment of nerve

[Term]
id: UBERON:0002619
name: regional part of cerebral cortex
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1173-FMA_68603
synonym: "cerebral cortical segment" EXACT [FMA:68603]
synonym: "regional organ part of cerebral cortex" EXACT [FMA:68603]
synonym: "segment of cerebral cortex" EXACT [NIF_GrossAnatomy:birnlex_1173]
xref: FMA:68603 ! Segment of cerebral cortex
xref: NIF_GrossAnatomy:birnlex_1173 ! Regional part of cerebral cortex
is_a: UBERON:0002616 ! regional part of brain
intersection_of: UBERON:0002616 ! regional part of brain
intersection_of: part_of UBERON:0000956 ! cerebral cortex

[Term]
id: UBERON:0002620
name: tuber cinereum
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1189-FMA_62327
def: "." [Wikipedia:Tuber_cinereum]
subset: uberon_slim
xref: FMA:62327 ! Tuber cinereum
xref: NIF_GrossAnatomy:birnlex_1189 ! Tuber cinereum
is_a: UBERON:0000477 ! anatomical cluster
xref: ncithesaurus:Tuber_Cinereum ! Tuber Cinereum

[Term]
id: UBERON:0002621
name: regional part of cochlear nuclear complex
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1195-FMA_83952
synonym: "cochlear nuclear complex segment" EXACT [FMA:83952]
synonym: "segment of cochlear nuclear complex" EXACT [NIF_GrossAnatomy:birnlex_1195]
xref: FMA:83952 ! Segment of cochlear nuclear complex
xref: NIF_GrossAnatomy:birnlex_1195 ! Regional part of cochlear nuclear complex
is_a: UBERON:0002678 ! regional part of medulla oblongata
intersection_of: UBERON:0002616 ! regional part of brain
intersection_of: part_of UBERON:0002610 ! cochlear nuclear complex

[Term]
id: UBERON:0002622
name: preoptic periventricular nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1201-FMA_62324
synonym: "periventricular preoptic nucleus" EXACT [FMA:62324]
synonym: "preoptic periventricular hypothalamic nucleus" EXACT [FMA:62324]
xref: FMA:62324 ! Preoptic periventricular nucleus
xref: NIF_GrossAnatomy:birnlex_1201 ! Preoptic periventricular nucleus
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0001928 ! preoptic area

[Term]
id: UBERON:0002623
name: cerebral peduncle
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1202-FMA_62394
def: "." [Wikipedia:Cerebral_peduncle]
subset: uberon_slim
synonym: "cerebral peduncle" EXACT [FMA:62394]
xref: FMA:62394 ! Peduncle of midbrain
xref: NIF_GrossAnatomy:birnlex_1202 ! Cerebral peduncle
is_a: UBERON:0002316 ! white matter of neuraxis
relationship: has_part UBERON:0001943 ! midbrain tegmentum
relationship: has_part UBERON:0002038 ! substantia nigra
xref: ncithesaurus:Cerebral_Peduncle ! Cerebral Peduncle

[Term]
id: UBERON:0002624
name: orbital part of inferior frontal gyrus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1207-FMA_61982
synonym: "inferior frontal gyrus, orbital part" EXACT [FMA:61982]
xref: FMA:61982 ! Orbital part of inferior frontal gyrus
xref: NIF_GrossAnatomy:birnlex_1207 ! Orbital part of inferior frontal gyrus
is_a: UBERON:0000064 ! organ part

[Term]
id: UBERON:0002625
name: median preoptic nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1208-FMA_62323
def: "." [Wikipedia:Median_preoptic_nucleus]
subset: uberon_slim
xref: FMA:62323 ! Median preoptic nucleus
xref: NIF_GrossAnatomy:birnlex_1208 ! Median preoptic nucleus
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0001928 ! preoptic area

[Term]
id: UBERON:0002626
name: head of caudate nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1212-FMA_61852
synonym: "caput (caudatus)" EXACT [FMA:61852]
synonym: "caudate nuclear head" EXACT [FMA:61852]
xref: FMA:61852 ! Head of caudate nucleus
xref: NIF_GrossAnatomy:birnlex_1212 ! Head of caudate nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis
relationship: part_of UBERON:0001873 ! caudate nucleus

[Term]
id: UBERON:0002627
name: capsule of medial geniculate body
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1214-FMA_62049
synonym: "medial geniculate body capsule" EXACT [FMA:62049]
xref: FMA:62049 ! Capsule of medial geniculate body
xref: NIF_GrossAnatomy:birnlex_1214 ! Capsule of medial geniculate body
is_a: UBERON:0002316 ! white matter of neuraxis
relationship: part_of UBERON:0001927 ! medial geniculate body

[Term]
id: UBERON:0002628
name: tail of caudate nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1215-FMA_61854
synonym: "caudate nuclear tail" EXACT [FMA:61854]
xref: FMA:61854 ! Tail of caudate nucleus
xref: NIF_GrossAnatomy:birnlex_1215 ! Tail of caudate nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis
relationship: part_of UBERON:0001873 ! caudate nucleus

[Term]
id: UBERON:0002629
name: triangular part of inferior frontal gyrus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1216-FMA_61980
xref: FMA:61980 ! Triangular part of inferior frontal gyrus
xref: NIF_GrossAnatomy:birnlex_1216 ! Triangular part of inferior frontal gyrus
is_a: UBERON:0000064 ! organ part

[Term]
id: UBERON:0002630
name: body of caudate nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1217-FMA_61853
synonym: "caudate nuclear body" EXACT [FMA:61853]
synonym: "corpus (caudatus)" EXACT [FMA:61853]
xref: FMA:61853 ! Body of caudate nucleus
xref: NIF_GrossAnatomy:birnlex_1217 ! Body of caudate nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis
relationship: part_of UBERON:0001873 ! caudate nucleus

[Term]
id: UBERON:0002631
name: cerebral crus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1218-FMA_72464
def: "." [Wikipedia:Cerebral_crus]
subset: uberon_slim
synonym: "cerebral peduncle (clinical definition)" EXACT [FMA:72464]
xref: FMA:72464 ! Cerebral crus
xref: NIF_GrossAnatomy:birnlex_1218 ! Cerebral crus
is_a: UBERON:0002316 ! white matter of neuraxis

[Term]
id: UBERON:0002632
name: medial part of medial mammillary nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1220-FMA_62345
synonym: "medial mammillary nucleus (Carpenter)" EXACT [FMA:62345]
synonym: "medial mammillary nucleus (carpenter)" EXACT []
synonym: "medial mammillary nucleus, medial part" EXACT [FMA:62345]
synonym: "medial mammillary nucleus, median part" EXACT [FMA:62345]
synonym: "medial subdivision of medial mammillary nucleus" EXACT [FMA:62345]
xref: FMA:62345 ! Medial part of medial mammillary nucleus
xref: NIF_GrossAnatomy:birnlex_1220 ! Medial part of medial mammillary nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis

[Term]
id: UBERON:0002633
name: motor nucleus of trigeminal nerve
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1222-FMA_54562
synonym: "motor nucleus of cranial nerve V" EXACT [FMA:54562]
synonym: "motor nucleus of cranial nerve v" EXACT []
synonym: "motor nucleus of trigeminal nerve" EXACT [FMA:54562]
xref: FMA:54562 ! Trigeminal motor nucleus
xref: NIF_GrossAnatomy:birnlex_1222 ! Motor nucleus of trigeminal nerve
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0002634
name: anterior nucleus of hypothalamus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1226-FMA_62319
def: "." [Wikipedia:Anterior_hypothalamic_nucleus]
subset: uberon_slim
synonym: "anterior hypothalamic area" EXACT [FMA:62319]
synonym: "anterior hypothalamic nucleus" EXACT [FMA:62319]
synonym: "fundamental gray substance" EXACT [FMA:62319]
synonym: "parvocellular nucleus of hypothalamus" EXACT [FMA:62319]
xref: FMA:62319 ! Anterior nucleus of hypothalamus
xref: NIF_GrossAnatomy:birnlex_1226 ! Anterior nucleus of hypothalamus
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0001928 ! preoptic area
xref: BTO:0002450 ! anterior hypothalamic nucleus

[Term]
id: UBERON:0002635
name: regional part of midbrain tegmentum
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1227-FMA_62399
synonym: "midbrain tegmentum segment" EXACT [FMA:62399]
synonym: "segment of midbrain tegmentum" EXACT [NIF_GrossAnatomy:birnlex_1227]
xref: FMA:62399 ! Segment of midbrain tegmentum
xref: NIF_GrossAnatomy:birnlex_1227 ! Regional part of midbrain tegmentum
is_a: UBERON:0002950 ! regional part of midbrain

[Term]
id: UBERON:0002636
name: lateral pulvinar nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1228-FMA_62181
synonym: "lateral pulvinar nucleus of thalamus" EXACT [FMA:62181]
xref: FMA:62181 ! Lateral pulvinar nucleus
xref: NIF_GrossAnatomy:birnlex_1228 ! Lateral pulvinar nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0002637
name: ventral anterior nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1232-FMA_62184
def: "." [Wikipedia:Ventral_anterior_nucleus]
subset: uberon_slim
synonym: "ventral anterior nucleus of thalamus" EXACT [FMA:62184]
synonym: "ventral anterior thalamic nucleus" EXACT [FMA:62184]
xref: FMA:62184 ! Ventral anterior nucleus
xref: NIF_GrossAnatomy:birnlex_1232 ! Ventral anterior nucleus
is_a: UBERON:0002308 ! nucleus of brain
xref: BTO:0002468 ! ventral anterior nucleus of thalamus

[Term]
id: UBERON:0002638
name: medial pulvinar nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1233-FMA_62182
xref: FMA:62182 ! Medial pulvinar nucleus
xref: NIF_GrossAnatomy:birnlex_1233 ! Medial pulvinar nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0002639
name: midbrain reticular formation
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1235-FMA_62406
synonym: "reticular formation of midbrain" EXACT [FMA:62406]
synonym: "tegmental reticular formation" EXACT [FMA:62406]
xref: FMA:62406 ! Midbrain reticular formation
xref: NIF_GrossAnatomy:birnlex_1235 ! Midbrain reticular formation
is_a: UBERON:0002275 ! reticular formation
intersection_of: UBERON:0002275 ! reticular formation
intersection_of: part_of UBERON:0001891 ! midbrain
relationship: has_part UBERON:0002142 ! pedunculopontine tegmental nucleus
relationship: part_of UBERON:0001943 ! midbrain tegmentum

[Term]
id: UBERON:0002640
name: cuneocerebellar tract
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1238-FMA_72637
def: "." [Wikipedia:Cuneocerebellar_tract]
subset: uberon_slim
xref: FMA:72637 ! Cuneocerebellar tract
xref: NIF_GrossAnatomy:birnlex_1238 ! Cuneocerebellar tract
is_a: UBERON:0002316 ! white matter of neuraxis
relationship: part_of UBERON:0001896 ! medulla oblongata

[Term]
id: UBERON:0002641
name: oral pulvinar nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1239-FMA_62180
synonym: "anterior pulvinar nucleus" EXACT [FMA:62180]
synonym: "oral nuclear group of pulvinar" EXACT [FMA:62180]
synonym: "oral part of pulvinar" EXACT [FMA:62180]
synonym: "oral portion of pulvinar" EXACT [FMA:62180]
xref: FMA:62180 ! Oral pulvinar nucleus
xref: NIF_GrossAnatomy:birnlex_1239 ! Oral pulvinar nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0002642
name: cuneate fasciculus of medulla
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1242-FMA_72623
xref: FMA:72623 ! Cuneate fasciculus of medulla
xref: NIF_GrossAnatomy:birnlex_1242 ! Cuneate fasciculus of medulla
is_a: UBERON:0000477 ! anatomical cluster
relationship: part_of UBERON:0001896 ! medulla oblongata

[Term]
id: UBERON:0002643
name: decussation of medial lemniscus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1245-FMA_72622
def: "." [Wikipedia:Sensory_decussation]
subset: uberon_slim
synonym: "decussation of lemnisci" EXACT [FMA:72622]
synonym: "decussation of lemniscus" EXACT [FMA:72622]
synonym: "decussation of medial lemnisci" EXACT [FMA:72622]
synonym: "medial lemniscus decussation" EXACT [FMA:72622]
synonym: "medullary sensory decussation" EXACT [FMA:72622]
synonym: "sensory decussation" EXACT [FMA:72622]
xref: FMA:72622 ! Decussation of medial lemniscus
xref: NIF_GrossAnatomy:birnlex_1245 ! Decussation of medial lemniscus
is_a: UBERON:0002316 ! white matter of neuraxis
relationship: part_of UBERON:0001896 ! medulla oblongata

[Term]
id: UBERON:0002644
name: intermediate orbital gyrus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1247-FMA_80183
xref: FMA:80183 ! Intermediate orbital gyrus
xref: NIF_GrossAnatomy:birnlex_1247 ! Intermediate orbital gyrus
is_a: UBERON:0000200 ! gyrus

[Term]
id: UBERON:0002645
name: densocellular part of medial dorsal nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1255-FMA_62163
xref: FMA:62163 ! Densocellular part of medial dorsal nucleus
xref: NIF_GrossAnatomy:birnlex_1255 ! Densocellular part of medial dorsal nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis

[Term]
id: UBERON:0002646
name: dorsal longitudinal fasciculus of medulla
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1257-FMA_72617
xref: FMA:72617 ! Dorsal longitudinal fasciculus of medulla
xref: NIF_GrossAnatomy:birnlex_1257 ! Dorsal longitudinal fasciculus of medulla
is_a: UBERON:0003045 ! dorsal longitudinal fasciculus
intersection_of: UBERON:0003045 ! dorsal longitudinal fasciculus
intersection_of: part_of UBERON:0000958 ! medulla
relationship: part_of UBERON:0001896 ! medulla oblongata

[Term]
id: UBERON:0002647
name: magnocellular part of medial dorsal nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1262-FMA_62161
synonym: "dorsomedial thalamic nucleus, magnocellular part" EXACT [FMA:62161]
synonym: "magnocellular mediodorsal nucleus" EXACT [FMA:62161]
synonym: "magnocellular nucleus of medial dorsal nucleus of thalamus" EXACT [FMA:62161]
synonym: "magnocellular part of dorsomedial nucleus" EXACT [FMA:62161]
xref: FMA:62161 ! Magnocellular part of medial dorsal nucleus
xref: NIF_GrossAnatomy:birnlex_1262 ! Magnocellular part of medial dorsal nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis

[Term]
id: UBERON:0002648
name: anterior median eminence
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1264-FMA_74870
xref: FMA:74870 ! Anterior median eminence
xref: NIF_GrossAnatomy:birnlex_1264 ! Anterior median eminence
is_a: UBERON:0000477 ! anatomical cluster

[Term]
id: UBERON:0002649
name: dorsolateral fasciculus of medulla
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1267-FMA_72616
def: "." [Wikipedia:Lissauer's_tract]
subset: uberon_slim
synonym: "dorsolateral tract" EXACT [FMA:72616]
synonym: "lissauer's tract" EXACT [FMA:72616]
synonym: "posterolateral fasciculus" EXACT [FMA:72616]
synonym: "posterolateral tract" EXACT [FMA:72616]
synonym: "tract of Lissauer" EXACT [FMA:72616]
synonym: "tract of lissauer" EXACT []
synonym: "zone of Lissauer" EXACT [FMA:72616]
synonym: "zone of lissauer" EXACT []
xref: FMA:72616 ! Dorsolateral fasciculus of medulla
xref: NIF_GrossAnatomy:birnlex_1267 ! Dorsolateral fasciculus of medulla
is_a: UBERON:0002316 ! white matter of neuraxis
relationship: part_of UBERON:0001896 ! medulla oblongata
xref: ncithesaurus:Tract_of_Lissauer ! Tract of Lissauer

[Term]
id: UBERON:0002650
name: paralaminar part of medial dorsal nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1276-FMA_62160
synonym: "dorsomedial thalamic nucleus, paralaminar part" EXACT [FMA:62160]
synonym: "paralaminar part of dorsomedial nucleus" EXACT [FMA:62160]
synonym: "paralaminar part of medial dorsal nucleus of thalamus" EXACT [FMA:62160]
synonym: "pars paralaminaris of medial dorsal nucleus of thalamus" EXACT [FMA:62160]
synonym: "ventral mediodorsal nucleus" EXACT [FMA:62160]
xref: FMA:62160 ! Paralaminar part of medial dorsal nucleus
xref: NIF_GrossAnatomy:birnlex_1276 ! Paralaminar part of medial dorsal nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis

[Term]
id: UBERON:0002651
name: anterior horn of lateral ventricle
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1279-FMA_74520
def: "." [Wikipedia:Anterior_horn_of_lateral_ventricle]
subset: uberon_slim
synonym: "anterior horn of lateral ventricle" EXACT [FMA:74520]
xref: FMA:74520 ! Frontal horn of lateral ventricle
xref: NIF_GrossAnatomy:birnlex_1279 ! Anterior horn of lateral ventricle
is_a: UBERON:0000061 ! anatomical structure
relationship: part_of UBERON:0002285 ! lateral ventricle

[Term]
id: UBERON:0002652
name: posterior median eminence
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1280-FMA_74875
xref: FMA:74875 ! Posterior median eminence
xref: NIF_GrossAnatomy:birnlex_1280 ! Posterior median eminence
is_a: UBERON:0000477 ! anatomical cluster

[Term]
id: UBERON:0002653
name: gracile fasciculus of medulla
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1282-FMA_72624
synonym: "column of Goll" EXACT [FMA:72624]
synonym: "column of goll" EXACT []
synonym: "fasciculus of Goll" EXACT [FMA:72624]
synonym: "fasciculus of goll" EXACT []
synonym: "goll's tract" EXACT [FMA:72624]
synonym: "gracile fascicle of medulla" EXACT [FMA:72624]
synonym: "medulla segment of fasciculus gracilis" EXACT [FMA:72624]
synonym: "medulla segment of gracile fasciculus" EXACT [FMA:72624]
synonym: "tract of Gall" EXACT [FMA:72624]
synonym: "tract of gall" EXACT []
xref: FMA:72624 ! Gracile fasciculus of medulla
xref: NIF_GrossAnatomy:birnlex_1282 ! Gracile fasciculus of medulla
is_a: UBERON:0002316 ! white matter of neuraxis
relationship: part_of UBERON:0001896 ! medulla oblongata

[Term]
id: UBERON:0002654
name: parvicellular part of medial dorsal nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1283-FMA_62162
synonym: "dorsomedial thalamic nucleus, parvicellular part" EXACT [FMA:62162]
synonym: "lateral mediodorsal nucleus" EXACT [FMA:62162]
synonym: "lateral nucleus of medial dorsal nucleus of thalamus" EXACT [FMA:62162]
synonym: "parvicellular part of dorsomedial nucleus" EXACT [FMA:62162]
synonym: "parvocellular nucleus of medial dorsal nucleus of thalamus" EXACT [FMA:62162]
synonym: "principal division of ventral anterior nucleus of thalamus" EXACT [FMA:62162]
xref: FMA:62162 ! Parvicellular part of medial dorsal nucleus
xref: NIF_GrossAnatomy:birnlex_1283 ! Parvicellular part of medial dorsal nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis

[Term]
id: UBERON:0002655
name: body of lateral ventricle
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1287-FMA_83703
def: "." [Wikipedia:Body_of_lateral_ventricle]
subset: uberon_slim
synonym: "central part of lateral ventricle" EXACT [FMA:83703]
synonym: "lateral ventricular body" EXACT [FMA:83703]
xref: FMA:83703 ! Body of lateral ventricle
xref: NIF_GrossAnatomy:birnlex_1287 ! Body of lateral ventricle
is_a: UBERON:0000061 ! anatomical structure
relationship: part_of UBERON:0002285 ! lateral ventricle

[Term]
id: UBERON:0002656
name: periamygdaloid area
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1291-FMA_62485
synonym: "para-amygdaloid cortex" EXACT [FMA:62485]
synonym: "periamygdaloid cortex" EXACT [FMA:62485]
synonym: "periamygdaloid region" EXACT [FMA:62485]
synonym: "semilunar gyrus" EXACT [FMA:62485]
synonym: "ventral cortical nucleus of amygdala" EXACT [FMA:62485]
xref: FMA:62485 ! Periamygdaloid area
xref: NIF_GrossAnatomy:birnlex_1291 ! Periamygdaloid area
is_a: UBERON:0002020 ! gray matter of neuraxis

[Term]
id: UBERON:0002657
name: posterior parahippocampal gyrus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1295-FMA_67966
synonym: "parahippocampal gyrus (Amaral)" EXACT [FMA:67966]
synonym: "parahippocampal gyrus (amaral)" EXACT []
xref: FMA:67966 ! Posterior parahippocampal gyrus
xref: NIF_GrossAnatomy:birnlex_1295 ! Posterior parahippocampal gyrus
is_a: UBERON:0000200 ! gyrus

[Term]
id: UBERON:0002658
name: medial lemniscus of midbrain
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1296-FMA_72461
xref: FMA:72461 ! Medial lemniscus of midbrain
xref: NIF_GrossAnatomy:birnlex_1296 ! Medial lemniscus of midbrain
is_a: UBERON:0003002 ! medial lemniscus
intersection_of: UBERON:0003002 ! medial lemniscus
intersection_of: part_of UBERON:0001891 ! midbrain
relationship: part_of UBERON:0001943 ! midbrain tegmentum

[Term]
id: UBERON:0002659
name: superior medullary velum
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1300-FMA_74508
def: "." [Wikipedia:Superior_medullary_velum]
subset: uberon_slim
synonym: "anterior medullary velum" EXACT [FMA:74508]
xref: FMA:74508 ! Superior medullary velum
xref: NIF_GrossAnatomy:birnlex_1300 ! Superior medullary velum
is_a: UBERON:0000477 ! anatomical cluster

[Term]
id: UBERON:0002660
name: medial longitudinal fasciculus of midbrain
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1302-FMA_72454
xref: FMA:72454 ! Medial longitudinal fasciculus of midbrain
xref: NIF_GrossAnatomy:birnlex_1302 ! Medial longitudinal fasciculus of midbrain
is_a: UBERON:0002309 ! medial longitudinal fasciculus
intersection_of: UBERON:0002309 ! medial longitudinal fasciculus
intersection_of: part_of UBERON:0001891 ! midbrain
relationship: part_of UBERON:0001943 ! midbrain tegmentum

[Term]
id: UBERON:0002661
name: superior frontal gyrus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1303-FMA_61857
def: "." [Wikipedia:Superior_frontal_gyrus]
subset: uberon_slim
synonym: "marginal gyrus" EXACT [FMA:61857]
synonym: "superior frontal convolution" EXACT [FMA:61857]
xref: FMA:61857 ! Superior frontal gyrus
xref: NIF_GrossAnatomy:birnlex_1303 ! Superior frontal gyrus
is_a: UBERON:0000200 ! gyrus
relationship: part_of UBERON:0001870 ! frontal lobe
xref: ncithesaurus:Superior_Frontal_Convolution ! Superior Frontal Convolution

[Term]
id: UBERON:0002662
name: medial pes lemniscus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1310-FMA_72460
synonym: "superficial pes lemniscus" EXACT [FMA:72460]
xref: FMA:72460 ! Medial pes lemniscus
xref: NIF_GrossAnatomy:birnlex_1310 ! Medial pes lemniscus
is_a: UBERON:0002316 ! white matter of neuraxis
relationship: part_of UBERON:0001943 ! midbrain tegmentum

[Term]
id: UBERON:0002663
name: septal nuclear complex
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1313-FMA_61845
def: "." [Wikipedia:Septal_nuclei]
subset: uberon_slim
synonym: "parolfactory nuclei" EXACT [FMA:61845]
synonym: "septal nuclei" EXACT [FMA:61845]
xref: FMA:61845 ! Septal nuclear complex
xref: NIF_GrossAnatomy:birnlex_1313 ! Septal nuclear complex
is_a: UBERON:0002020 ! gray matter of neuraxis

[Term]
id: UBERON:0002664
name: lateral part of medial mammillary nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1314-FMA_62346
synonym: "intercalated mammillary nucleus" EXACT [FMA:62346]
synonym: "intermediate mammillary nucleus" EXACT [FMA:62346]
synonym: "lateral mammillary nucleus (Gagel)" EXACT [FMA:62346]
synonym: "lateral mammillary nucleus (gagel)" EXACT []
synonym: "lateral subdivision of medial mammillary nucleus" EXACT [FMA:62346]
synonym: "medial mammillary nucleus, lateral part" EXACT [FMA:62346]
xref: FMA:62346 ! Lateral part of medial mammillary nucleus
xref: NIF_GrossAnatomy:birnlex_1314 ! Lateral part of medial mammillary nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis

[Term]
id: UBERON:0002665
name: supracallosal gyrus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1316-FMA_61920
def: "." [Wikipedia:Supracallosal_gyrus]
subset: uberon_slim
synonym: "supracommissural hippocampal rudiment" EXACT [FMA:61920]
synonym: "supracommissural hippocampus" EXACT [FMA:61920]
xref: FMA:61920 ! Supracallosal gyrus
xref: NIF_GrossAnatomy:birnlex_1316 ! Supracallosal gyrus
is_a: UBERON:0000200 ! gyrus

[Term]
id: UBERON:0002666
name: mesencephalic tract of trigeminal nerve
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1318-FMA_72489
synonym: "mesencephalic root of V" EXACT [FMA:72489]
synonym: "mesencephalic root of v" EXACT []
synonym: "mesencephalic trigeminal tract" EXACT [FMA:72489]
xref: FMA:72489 ! Mesencephalic tract of trigeminal nerve
xref: NIF_GrossAnatomy:birnlex_1318 ! Mesencephalic tract of trigeminal nerve
is_a: UBERON:0002316 ! white matter of neuraxis

[Term]
id: UBERON:0002667
name: lateral septal nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1321-FMA_61878
synonym: "lateral parolfactory nucleus" EXACT [FMA:61878]
xref: FMA:61878 ! Lateral septal nucleus
xref: NIF_GrossAnatomy:birnlex_1321 ! Lateral septal nucleus
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0002668
name: oculomotor nerve fibers
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1323-FMA_72457
synonym: "oculomotor nerve fibers" EXACT [FMA:72457]
synonym: "root of oculomotor nerve" EXACT [FMA:72457]
xref: FMA:72457 ! Central part of oculomotor nerve
xref: NIF_GrossAnatomy:birnlex_1323 ! Oculomotor nerve fibers
is_a: UBERON:0002211 ! segment of nerve
relationship: part_of UBERON:0001943 ! midbrain tegmentum

[Term]
id: UBERON:0002669
name: anterior horizontal limb of lateral sulcus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1327-FMA_83760
synonym: "anterior branch of lateral sulcus" EXACT [FMA:83760]
synonym: "anterior horizontal limb of lateral fissure" EXACT [FMA:83760]
synonym: "anterior horizontal ramus of lateral fissure" EXACT [FMA:83760]
synonym: "anterior ramus of lateral cerebral sulcus" EXACT [FMA:83760]
synonym: "horizontal limb of lateral fissure" EXACT [FMA:83760]
synonym: "horizontal ramus of Sylvian fissure" EXACT [FMA:83760]
synonym: "horizontal ramus of sylvian fissure" EXACT []
xref: FMA:83760 ! Anterior horizontal limb of lateral sulcus
xref: NIF_GrossAnatomy:birnlex_1327 ! Anterior horizontal limb of lateral sulcus
is_a: UBERON:0000464 ! anatomical space

[Term]
id: UBERON:0002670
name: anterior ascending limb of lateral sulcus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1330-FMA_83759
synonym: "anterior ascending limb of lateral fissure" EXACT [FMA:83759]
synonym: "anterior ascending ramus of lateral sulcus" EXACT [FMA:83759]
synonym: "ascending branch of lateral sulcus" EXACT [FMA:83759]
synonym: "ascending ramus of lateral cerebral sulcus" EXACT [FMA:83759]
synonym: "ascending ramus of Sylvian fissure" EXACT [FMA:83759]
synonym: "ascending ramus of sylvian fissure" EXACT []
synonym: "middle ramus of lateral fissure" EXACT [FMA:83759]
synonym: "superior branch of lateral fissure" EXACT [FMA:83759]
xref: FMA:83759 ! Anterior ascending limb of lateral sulcus
xref: NIF_GrossAnatomy:birnlex_1330 ! Anterior ascending limb of lateral sulcus
is_a: UBERON:0000464 ! anatomical space

[Term]
id: UBERON:0002671
name: pallidotegmental fasciculus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1331-FMA_72458
synonym: "pallidotegmental tract" EXACT [FMA:72458]
xref: FMA:72458 ! Pallidotegmental fasciculus
xref: NIF_GrossAnatomy:birnlex_1331 ! Pallidotegmental fasciculus
is_a: UBERON:0002316 ! white matter of neuraxis
relationship: part_of UBERON:0001943 ! midbrain tegmentum

[Term]
id: UBERON:0002672
name: anterior subcentral sulcus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1332-FMA_83765
xref: FMA:83765 ! Anterior subcentral sulcus
xref: NIF_GrossAnatomy:birnlex_1332 ! Anterior subcentral sulcus
is_a: UBERON:0000093 ! sulcus

[Term]
id: UBERON:0002673
name: vestibular nuclear complex
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1337-FMA_72239
def: "." [Wikipedia:Vestibular_nuclei]
subset: uberon_slim
synonym: "vestibular nuclei" EXACT [FMA:72239]
synonym: "vestibular nuclei in medulla oblongata" EXACT [FMA:72239]
xref: FMA:72239 ! Vestibular nuclear complex
xref: NIF_GrossAnatomy:birnlex_1337 ! Vestibular nuclear complex
is_a: UBERON:0002020 ! gray matter of neuraxis
relationship: part_of UBERON:0001896 ! medulla oblongata

[Term]
id: UBERON:0002674
name: trochlear nerve root
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1341-FMA_71116
synonym: "central part of trochlear nerve" EXACT [FMA:71116]
synonym: "trochlear nerve fibers" EXACT [FMA:71116]
synonym: "trochlear nerve root" EXACT [FMA:71116]
xref: FMA:71116 ! Trochlear nerve tract
xref: NIF_GrossAnatomy:birnlex_1341 ! Trochlear nerve root
is_a: UBERON:0002211 ! segment of nerve

[Term]
id: UBERON:0002675
name: diagonal sulcus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1344-FMA_83758
xref: FMA:83758 ! Diagonal sulcus
xref: NIF_GrossAnatomy:birnlex_1344 ! Diagonal sulcus
is_a: UBERON:0000093 ! sulcus

[Term]
id: UBERON:0002676
name: ventral supraoptic decussation
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1347-FMA_62052
def: "." [Wikipedia:Ventral_supraoptic_decussation]
subset: uberon_slim
synonym: "commissure of Gudden" EXACT [FMA:62052]
synonym: "commissure of gudden" EXACT []
synonym: "gudden commissure" EXACT [FMA:62052]
synonym: "gudden's commissure" EXACT [FMA:62052]
synonym: "supraoptic commissures, ventral" EXACT [FMA:62052]
synonym: "ventral supra-optic commissure" EXACT [FMA:62052]
synonym: "ventral supraoptic commissure (of Meynert)" EXACT [FMA:62052]
synonym: "ventral supraoptic commissure (of meynert)" EXACT []
synonym: "ventral supraoptic decussation of Gudden" EXACT [FMA:62052]
synonym: "ventral supraoptic decussation of gudden" EXACT []
synonym: "von Gudden's commissure" EXACT [FMA:62052]
synonym: "von gudden's commissure" EXACT []
xref: FMA:62052 ! Ventral supraoptic decussation
xref: NIF_GrossAnatomy:birnlex_1347 ! Ventral supraoptic decussation
is_a: UBERON:0000477 ! anatomical cluster

[Term]
id: UBERON:0002677
name: regional part of medullary raphe nuclear complex
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1349-FMA_83951
synonym: "medullary raphe nuclear complex segment" EXACT [FMA:83951]
synonym: "segment of medullary raphe nuclear complex" EXACT [NIF_GrossAnatomy:birnlex_1349]
xref: FMA:83951 ! Segment of medullary raphe nuclear complex
xref: NIF_GrossAnatomy:birnlex_1349 ! Regional part of medullary raphe nuclear complex
is_a: UBERON:0002678 ! regional part of medulla oblongata
intersection_of: UBERON:0002616 ! regional part of brain
intersection_of: part_of UBERON:0002692 ! medullary raphe nuclear complex

[Term]
id: UBERON:0002678
name: regional part of medulla oblongata
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1355-FMA_71011
synonym: "medullary oblongata segment" EXACT [FMA:71011]
synonym: "segment of medulla oblongata" EXACT [NIF_GrossAnatomy:birnlex_1355]
xref: FMA:71011 ! Segment of medulla oblongata
xref: NIF_GrossAnatomy:birnlex_1355 ! Regional part of medulla oblongata
is_a: UBERON:0001892 ! segment of hindbrain
intersection_of: UBERON:0002616 ! regional part of brain
intersection_of: part_of UBERON:0001896 ! medulla oblongata

[Term]
id: UBERON:0002679
name: anterodorsal nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1358-FMA_62141
synonym: "anterodorsal nucleus of thalamus" EXACT [FMA:62141]
synonym: "anterodorsal thalamic nucleus" EXACT [FMA:62141]
xref: FMA:62141 ! Anterodorsal nucleus
xref: NIF_GrossAnatomy:birnlex_1358 ! Anterodorsal nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0002680
name: regional part of metencephalon
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1361-FMA_67942
synonym: "metencephalon subdivision" EXACT [FMA:67942]
synonym: "segment of metencephalon" EXACT [NIF_GrossAnatomy:birnlex_1361]
xref: FMA:67942 ! Segment of metencephalon
xref: NIF_GrossAnatomy:birnlex_1361 ! Regional part of metencephalon
is_a: UBERON:0000477 ! anatomical cluster
is_a: UBERON:0001892 ! segment of hindbrain
intersection_of: UBERON:0002616 ! regional part of brain
intersection_of: part_of UBERON:0001895 ! metencephalon

[Term]
id: UBERON:0002681
name: anteromedial nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1365-FMA_62142
synonym: "anteromedial nucleus of thalamus" EXACT [FMA:62142]
synonym: "anteromedial thalamic nucleus" EXACT [FMA:62142]
xref: FMA:62142 ! Anteromedial nucleus
xref: NIF_GrossAnatomy:birnlex_1365 ! Anteromedial nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0002682
name: abducens nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1366-FMA_54504
def: "." [Wikipedia:Abducens_nucleus]
subset: uberon_slim
synonym: "abducens nerve nucleus" EXACT [FMA:54504]
synonym: "abducent nucleus" EXACT [FMA:54504]
synonym: "nucleus of abducens nerve" EXACT [FMA:54504]
synonym: "nucleus of abducens nerve (VI)" EXACT [FMA:54504]
synonym: "nucleus of abducens nerve (vi)" EXACT []
synonym: "sixth cranial nerve nucleus" EXACT [FMA:54504]
xref: FMA:54504 ! Abducens nucleus
xref: NIF_GrossAnatomy:birnlex_1366 ! Abducens nucleus
xref: ZFA:0000713 ! abducens motor nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0000988 ! pons
xref: ncithesaurus:Abducens_Nucleus ! Abducens Nucleus

[Term]
id: UBERON:0002683
name: rhinal sulcus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1368-FMA_83746
def: "." [Wikipedia:Rhinal_sulcus]
subset: uberon_slim
synonym: "rhinal fissure" EXACT [FMA:83746]
xref: FMA:83746 ! Rhinal sulcus
xref: NIF_GrossAnatomy:birnlex_1368 ! Rhinal sulcus
is_a: UBERON:0000093 ! sulcus

[Term]
id: UBERON:0002684
name: nucleus raphe obscurus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1369-FMA_72585
def: "." [Wikipedia:Nucleus_raphe_obscurus]
subset: uberon_slim
synonym: "obscurus raphe nucleus" EXACT [FMA:72585]
synonym: "raphe obscurus nucleus" EXACT [FMA:72585]
xref: FMA:72585 ! Nucleus raphe obscurus
xref: NIF_GrossAnatomy:birnlex_1369 ! Nucleus raphe obscurus
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0002685
name: anteroventral nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1372-FMA_62143
synonym: "anterior ventral nucleus of thalamus" EXACT [FMA:62143]
synonym: "anteroprincipal thalamic nucleus" EXACT [FMA:62143]
synonym: "anteroventral nucleus of thalamus" EXACT [FMA:62143]
synonym: "anteroventral thalamic nucleus" EXACT [FMA:62143]
xref: FMA:62143 ! Anteroventral nucleus
xref: NIF_GrossAnatomy:birnlex_1372 ! Anteroventral nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0002686
name: angular gyrus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1376-FMA_61898
def: "." [Wikipedia:Angular_gyrus]
subset: uberon_slim
synonym: "middle part of inferior parietal lobule" EXACT [FMA:61898]
synonym: "preoccipital gyrus" EXACT [FMA:61898]
xref: FMA:61898 ! Angular gyrus
xref: NIF_GrossAnatomy:birnlex_1376 ! Angular gyrus
is_a: UBERON:0000200 ! gyrus
relationship: part_of UBERON:0001872 ! parietal lobe
xref: ncithesaurus:Angular_Gyrus ! Angular Gyrus

[Term]
id: UBERON:0002687
name: area x
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1379-FMA_62198
synonym: "anteromedial part of ventral lateral posterior nucleus (Jones)" EXACT [FMA:62198]
synonym: "anteromedial part of ventral lateral posterior nucleus (jones)" EXACT []
xref: FMA:62198 ! Area X
xref: NIF_GrossAnatomy:birnlex_1379 ! Area X
is_a: UBERON:0002020 ! gray matter of neuraxis
relationship: part_of UBERON:0001925 ! ventral lateral nucleus

[Term]
id: UBERON:0002688
name: supramarginal gyrus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1381-FMA_61897
def: "." [Wikipedia:Supramarginal_gyrus]
subset: uberon_slim
synonym: "anterior part of inferior parietal lobule" EXACT [FMA:61897]
synonym: "inferior parietal lobule (Krieg)" EXACT [FMA:61897]
synonym: "inferior parietal lobule (krieg)" EXACT []
xref: FMA:61897 ! Supramarginal gyrus
xref: NIF_GrossAnatomy:birnlex_1381 ! Supramarginal gyrus
is_a: UBERON:0000200 ! gyrus
relationship: part_of UBERON:0001872 ! parietal lobe
xref: ncithesaurus:Supramarginal_Gyrus ! Supramarginal Gyrus

[Term]
id: UBERON:0002689
name: supraoptic crest
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1400-FMA_62315
synonym: "vascular organ of lamina terminalis" EXACT [FMA:62315]
xref: FMA:62315 ! Supraoptic crest
xref: NIF_GrossAnatomy:birnlex_1400 ! Supraoptic crest
is_a: UBERON:0000064 ! organ part

[Term]
id: UBERON:0002690
name: anteroventral periventricular nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1401-FMA_62314
xref: FMA:62314 ! Anteroventral periventricular nucleus
xref: NIF_GrossAnatomy:birnlex_1401 ! Anteroventral periventricular nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0002691
name: ventral tegmental area
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1415-FMA_72438
def: "." [Wikipedia:Ventral_tegmental_area]
subset: uberon_slim
synonym: "ventral tegmental area of Tsai" EXACT [FMA:72438]
synonym: "ventral tegmental area of tsai" EXACT []
synonym: "ventral tegmental nucleus (Tsai)" EXACT [FMA:72438]
synonym: "ventral tegmental nucleus (tsai)" EXACT []
synonym: "ventral tegmental nucleus of Tsai" EXACT [FMA:72438]
synonym: "ventral tegmental nucleus of tsai" EXACT []
xref: FMA:72438 ! Ventral tegmental area
xref: NIF_GrossAnatomy:birnlex_1415 ! Ventral tegmental area
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0001943 ! midbrain tegmentum

[Term]
id: UBERON:0002692
name: medullary raphe nuclear complex
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1420-FMA_68874
synonym: "raphe nuclei of medulla" EXACT [FMA:68874]
synonym: "raphe of medulla oblongata" EXACT [FMA:68874]
xref: FMA:68874 ! Medullary raphe nuclear complex
xref: NIF_GrossAnatomy:birnlex_1420 ! Medullary raphe nuclear complex
is_a: UBERON:0002020 ! gray matter of neuraxis
relationship: part_of UBERON:0001896 ! medulla oblongata

[Term]
id: UBERON:0002693
name: occipitotemporal sulcus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1422-FMA_74518
synonym: "inferior temporal fissure" EXACT [FMA:74518]
synonym: "inferior temporal sulcus (Roberts)" EXACT [FMA:74518]
synonym: "inferior temporal sulcus (roberts)" EXACT []
synonym: "inferior temporal sulcus (Szikla)" EXACT [FMA:74518]
synonym: "inferior temporal sulcus (szikla)" EXACT []
synonym: "inferior temporal sulcus-2" EXACT [FMA:74518]
synonym: "occipito-temporal sulcus" EXACT [FMA:74518]
synonym: "third temporal sulcus" EXACT [FMA:74518]
xref: FMA:74518 ! Occipitotemporal sulcus
xref: NIF_GrossAnatomy:birnlex_1422 ! Occipitotemporal sulcus
is_a: UBERON:0000093 ! sulcus

[Term]
id: UBERON:0002694
name: anterior hypothalamic commissure
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1424-FMA_62053
synonym: "anterior hypothalamic commissure (Ganser)" EXACT [FMA:62053]
synonym: "anterior hypothalamic commissure (ganser)" EXACT []
synonym: "anterior hypothalamic decussation of Ganser" EXACT [FMA:62053]
synonym: "anterior hypothalamic decussation of ganser" EXACT []
xref: FMA:62053 ! Anterior hypothalamic commissure
xref: NIF_GrossAnatomy:birnlex_1424 ! Anterior hypothalamic commissure
is_a: UBERON:0000477 ! anatomical cluster

[Term]
id: UBERON:0002695
name: parieto-occipital sulcus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1428-FMA_83754
def: "." [Wikipedia:Parieto-occipital_sulcus]
subset: uberon_slim
synonym: "parieto-occipital fissure" EXACT [FMA:83754]
synonym: "parieto-occipital incisure" EXACT [FMA:83754]
synonym: "parietooccipital sulcus" EXACT [FMA:83754]
xref: FMA:83754 ! Parieto-occipital sulcus
xref: NIF_GrossAnatomy:birnlex_1428 ! Parieto-occipital sulcus
xref: OpenCyc:Mx4rv7l_DJwpEbGdrcN5Y29ycA
is_a: UBERON:0000093 ! sulcus
xref: ncithesaurus:Parieto-occipital_Fissure ! Parieto-Occipital Fissure

[Term]
id: UBERON:0002696
name: cuneiform nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1430-FMA_72427
synonym: "parabigeminal area (Mai)" EXACT [FMA:72427]
synonym: "parabigeminal area (mai)" EXACT []
xref: FMA:72427 ! Cuneiform nucleus
xref: NIF_GrossAnatomy:birnlex_1430 ! Cuneiform nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0002697
name: dorsal supraoptic decussation
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1433-FMA_62051
synonym: "commissure of Meynert" EXACT [FMA:62051]
synonym: "commissure of meynert" EXACT []
synonym: "dorsal supra-optic commissure" EXACT [FMA:62051]
synonym: "dorsal supraoptic commissure" EXACT [FMA:62051]
synonym: "dorsal supraoptic commissure (of Ganser)" EXACT [FMA:62051]
synonym: "dorsal supraoptic commissure (of ganser)" EXACT []
synonym: "dorsal supraoptic decussation of Meynert" EXACT [FMA:62051]
synonym: "dorsal supraoptic decussation of meynert" EXACT []
synonym: "ganser's commissure" EXACT [FMA:62051]
synonym: "meynert's commissure" EXACT [FMA:62051]
synonym: "supraoptic commissure of Meynert" EXACT [FMA:62051]
synonym: "supraoptic commissure of meynert" EXACT []
synonym: "supraoptic commissures, dorsal" EXACT [FMA:62051]
xref: FMA:62051 ! Dorsal supraoptic decussation
xref: NIF_GrossAnatomy:birnlex_1433 ! Dorsal supraoptic decussation
is_a: UBERON:0000477 ! anatomical cluster

[Term]
id: UBERON:0002698
name: preoccipital notch
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1436-FMA_83739
synonym: "occipital notch" EXACT [FMA:83739]
synonym: "preoccipital incisura" EXACT [FMA:83739]
synonym: "preoccipital incisure" EXACT [FMA:83739]
xref: FMA:83739 ! Preoccipital notch
xref: NIF_GrossAnatomy:birnlex_1436 ! Preoccipital notch
is_a: UBERON:0000464 ! anatomical space

[Term]
id: UBERON:0002699
name: supraopticohypophysial tract
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1440-FMA_62054
synonym: "supra-opticohypophysial tract" EXACT [FMA:62054]
synonym: "supraopticohypophyseal tract" EXACT [FMA:62054]
xref: FMA:62054 ! Supraopticohypophysial tract
xref: NIF_GrossAnatomy:birnlex_1440 ! Supraopticohypophysial tract
is_a: UBERON:0002316 ! white matter of neuraxis

[Term]
id: UBERON:0002700
name: subcuneiform nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1441-FMA_72428
synonym: "subcuneiform area of midbrain" EXACT [FMA:72428]
xref: FMA:72428 ! Subcuneiform nucleus
xref: NIF_GrossAnatomy:birnlex_1441 ! Subcuneiform nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0002701
name: anterior median oculomotor nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1445-FMA_72423
synonym: "anterior median nucleus of oculomotor nerve" EXACT [FMA:72423]
xref: FMA:72423 ! Anterior median oculomotor nucleus
xref: NIF_GrossAnatomy:birnlex_1445 ! Anterior median oculomotor nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0002702
name: middle frontal gyrus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1451-FMA_61859
def: "." [Wikipedia:Middle_frontal_gyrus]
subset: uberon_slim
synonym: "intermediate frontal gyrus" EXACT [FMA:61859]
synonym: "medial frontal gyrus" EXACT [FMA:61859]
xref: FMA:61859 ! Middle frontal gyrus
xref: NIF_GrossAnatomy:birnlex_1451 ! Middle frontal gyrus
is_a: UBERON:0000200 ! gyrus
relationship: part_of UBERON:0001870 ! frontal lobe
xref: ncithesaurus:Middle_Frontal_Gyrus ! Middle Frontal Gyrus

[Term]
id: UBERON:0002703
name: precentral gyrus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1455-FMA_61894
def: "." [Wikipedia:Precentral_gyrus]
subset: uberon_slim
synonym: "precentral convolution" EXACT [FMA:61894]
synonym: "prerolandic gyrus" EXACT [FMA:61894]
xref: FMA:61894 ! Precentral gyrus
xref: NIF_GrossAnatomy:birnlex_1455 ! Precentral gyrus
is_a: UBERON:0000200 ! gyrus
relationship: part_of UBERON:0001870 ! frontal lobe
xref: ncithesaurus:Precentral_Gyrus ! Precentral Gyrus

[Term]
id: UBERON:0002704
name: metathalamus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1461-FMA_62023
def: "." [Wikipedia:Metathalamus]
subset: uberon_slim
synonym: "geniculate group of the dorsal thalamus" EXACT [FMA:62023]
xref: FMA:62023 ! Metathalamus
xref: NIF_GrossAnatomy:birnlex_1461 ! Metathalamus
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0001897 ! thalamus

[Term]
id: UBERON:0002705
name: midline nuclear group
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1462-FMA_62020
def: "." [Wikipedia:Midline_nuclear_group]
subset: uberon_slim
synonym: "median nuclei of thalamus" EXACT [FMA:62020]
synonym: "midline nuclear group" EXACT [FMA:62020]
synonym: "midline nuclei of thalamus" EXACT [FMA:62020]
synonym: "periventricular nuclei of thalamus" EXACT [FMA:62020]
xref: FMA:62020 ! Midline nuclear group of thalamus
xref: NIF_GrossAnatomy:birnlex_1462 ! Midline nuclear group
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0001897 ! thalamus

[Term]
id: UBERON:0002706
name: posterior nucleus of hypothalamus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1463-FMA_62350
synonym: "posterior hypothalamic area" EXACT [FMA:62350]
synonym: "posterior hypothalamic nucleus" EXACT [FMA:62350]
xref: FMA:62350 ! Posterior nucleus of hypothalamus
xref: NIF_GrossAnatomy:birnlex_1463 ! Posterior nucleus of hypothalamus
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain
xref: BTO:0002461 ! posterior hypothalamic nucleus

[Term]
id: UBERON:0002707
name: pyramidal tract
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1464-FMA_72634
def: "." [Wikipedia:Pyramidal_tract]
subset: uberon_slim
xref: FMA:72634 ! Pyramidal tract
xref: NIF_GrossAnatomy:birnlex_1464 ! Pyramidal tract
is_a: UBERON:0002316 ! white matter of neuraxis
relationship: part_of UBERON:0001896 ! medulla oblongata

[Term]
id: UBERON:0002708
name: posterior periventricular nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1466-FMA_62349
synonym: "periventricular nucleus, posterior subdivision" EXACT [FMA:62349]
synonym: "posterior periventricular nucleus" EXACT [FMA:62349]
xref: FMA:62349 ! Posterior periventricular nucleus of hypothalamus
xref: NIF_GrossAnatomy:birnlex_1466 ! Posterior periventricular nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain
xref: BTO:0002479 ! posterior periventricular nucleus

[Term]
id: UBERON:0002709
name: posterior nuclear complex
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1467-FMA_62024
synonym: "posterior complex of thalamus" EXACT [FMA:62024]
synonym: "posterior nuclear complex" EXACT [FMA:62024]
synonym: "posterior nuclear complex of thalamus" EXACT [FMA:62024]
synonym: "posterior thalamic nuclear group" EXACT [FMA:62024]
xref: FMA:62024 ! Posterior nuclear group of thalamus
xref: NIF_GrossAnatomy:birnlex_1467 ! Posterior nuclear complex
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0001897 ! thalamus
xref: BTO:0002462 ! posterior nuclear complex of thalamus

[Term]
id: UBERON:0002710
name: cingulate sulcus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1468-FMA_83748
def: "." [Wikipedia:Cingulate_sulcus]
subset: uberon_slim
synonym: "calloso-marginal sulcus" EXACT [FMA:83748]
synonym: "callosomarginal fissure" EXACT [FMA:83748]
synonym: "callosomarginal sulcus" EXACT [FMA:83748]
synonym: "cingulate fissure" EXACT [FMA:83748]
xref: FMA:83748 ! Cingulate sulcus
xref: NIF_GrossAnatomy:birnlex_1468 ! Cingulate sulcus
is_a: UBERON:0000093 ! sulcus

[Term]
id: UBERON:0002711
name: nucleus of posterior commissure
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1470-FMA_68463
synonym: "posterior commissure nucleus" EXACT [FMA:68463]
xref: FMA:68463 ! Nucleus of posterior commissure
xref: NIF_GrossAnatomy:birnlex_1470 ! Nucleus of posterior commissure
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0001943 ! midbrain tegmentum

[Term]
id: UBERON:0002712
name: premammillary nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1473-FMA_62348
synonym: "premammillary nuclei" EXACT [FMA:62348]
xref: FMA:62348 ! Premammillary nucleus
xref: NIF_GrossAnatomy:birnlex_1473 ! Premammillary nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0002713
name: circular sulcus of insula
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1475-FMA_83753
synonym: "circular fissure" EXACT [FMA:83753]
synonym: "circular sulcus (of Reil)" EXACT [FMA:83753]
synonym: "circular sulcus (of reil)" EXACT []
synonym: "circuminsular sulcus" EXACT [FMA:83753]
synonym: "limiting fissure" EXACT [FMA:83753]
synonym: "marginal sulcus of insula" EXACT [FMA:83753]
xref: FMA:83753 ! Circular sulcus of insula
xref: NIF_GrossAnatomy:birnlex_1475 ! Circular sulcus of insula
is_a: UBERON:0002912 ! marginal sulcus
intersection_of: UBERON:0002912 ! marginal sulcus
intersection_of: part_of UBERON:0002022 ! insula

[Term]
id: UBERON:0002714
name: rubrospinal tract
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1476-FMA_72640
def: "long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body in the red nucleus of the midbrain towards target cells in the spinal cord[GO]." [Wikipedia:Rubrospinal_tract]
subset: uberon_slim
synonym: "monakow's tract" EXACT [FMA:72640]
xref: FMA:72640 ! Rubrospinal tract
xref: NIF_GrossAnatomy:birnlex_1476 ! Rubrospinal tract
is_a: UBERON:0002316 ! white matter of neuraxis
relationship: part_of UBERON:0001896 ! medulla oblongata

[Term]
id: UBERON:0002715
name: spinal trigeminal tract of medulla
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1477-FMA_72625
xref: FMA:72625 ! Spinal trigeminal tract of medulla
xref: NIF_GrossAnatomy:birnlex_1477 ! Spinal trigeminal tract of medulla
is_a: UBERON:0002316 ! white matter of neuraxis
relationship: part_of UBERON:0001896 ! medulla oblongata

[Term]
id: UBERON:0002716
name: collateral sulcus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1480-FMA_83751
def: "." [Wikipedia:Collateral_fissure]
subset: uberon_slim
synonym: "collateral fissure" EXACT [FMA:83751]
xref: FMA:83751 ! Collateral sulcus
xref: NIF_GrossAnatomy:birnlex_1480 ! Collateral sulcus
is_a: UBERON:0000093 ! sulcus
xref: ncithesaurus:Collateral_Fissure ! Collateral Fissure

[Term]
id: UBERON:0002717
name: rostral interstitial nucleus of medial longitudinal fasciculus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1481-FMA_72433
def: "." [Wikipedia:Rostral_interstitial_nucleus_of_medial_longitudinal_fasciculus]
subset: uberon_slim
synonym: "rostral interstitial nucleus of MLF" EXACT [FMA:72433]
synonym: "rostral interstitial nucleus of mlf" EXACT []
xref: FMA:72433 ! Rostral interstitial nucleus of medial longitudinal fasciculus
xref: NIF_GrossAnatomy:birnlex_1481 ! Rostral interstitial nucleus of medial longitudinal fasciculus
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0001943 ! midbrain tegmentum

[Term]
id: UBERON:0002718
name: solitary tract
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1483-FMA_72619
def: "." [Wikipedia:Solitary_tract]
subset: uberon_slim
synonym: "respiratory bundle of Gierke" EXACT [FMA:72619]
synonym: "respiratory bundle of gierke" EXACT []
xref: FMA:72619 ! Solitary tract
xref: NIF_GrossAnatomy:birnlex_1483 ! Solitary tract
is_a: UBERON:0002316 ! white matter of neuraxis
relationship: part_of UBERON:0001896 ! medulla oblongata

[Term]
id: UBERON:0002719
name: spino-olivary tract
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1484-FMA_72643
def: "." [Wikipedia:Spino-olivary_tract]
subset: uberon_slim
synonym: "helweg's tract" EXACT [FMA:72643]
xref: FMA:72643 ! Spino-olivary tract
xref: NIF_GrossAnatomy:birnlex_1484 ! Spino-olivary tract
is_a: UBERON:0002316 ! white matter of neuraxis
relationship: part_of UBERON:0001896 ! medulla oblongata

[Term]
id: UBERON:0002720
name: mammillary peduncle
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1486-FMA_62061
synonym: "peduncle of mammillary body" EXACT [FMA:62061]
xref: FMA:62061 ! Mammillary peduncle
xref: NIF_GrossAnatomy:birnlex_1486 ! Mammillary peduncle
is_a: UBERON:0002316 ! white matter of neuraxis

[Term]
id: UBERON:0002721
name: lateral sulcus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1487-FMA_77801
def: "." [Wikipedia:Lateral_sulcus]
subset: uberon_slim
synonym: "fissure of Sylvius" EXACT [FMA:77801]
synonym: "fissure of sylvius" EXACT []
synonym: "lateral cerebral fissure" EXACT [FMA:77801]
synonym: "lateral cerebral sulcus" EXACT [FMA:77801]
synonym: "lateral fissure" EXACT [FMA:77801]
synonym: "lateral fissure of Sylvius" EXACT [FMA:77801]
synonym: "lateral fissure of sylvius" EXACT []
synonym: "transverse cerebral fissure" EXACT [FMA:77801]
xref: FMA:77801 ! Lateral sulcus
xref: NIF_GrossAnatomy:birnlex_1487 ! Lateral sulcus
is_a: UBERON:0000093 ! sulcus
xref: ncithesaurus:Fissure_of_Sylvius ! Fissure of Sylvius

[Term]
id: UBERON:0002722
name: trochlear nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1488-FMA_54518
def: "." [Wikipedia:Trochlear_nucleus]
subset: uberon_slim
synonym: "fourth cranial nerve nucleus" EXACT [FMA:54518]
synonym: "nucleus of trochlear nerve" EXACT [FMA:54518]
xref: FMA:54518 ! Trochlear nucleus
xref: NIF_GrossAnatomy:birnlex_1488 ! Trochlear nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0001644 ! trochlear nerve

[Term]
id: UBERON:0002723
name: mammillary princeps fasciculus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1492-FMA_62057
synonym: "principal mammillary fasciculus" EXACT [FMA:62057]
synonym: "principle mamillary fasciculus" EXACT [FMA:62057]
xref: FMA:62057 ! Mammillary princeps fasciculus
xref: NIF_GrossAnatomy:birnlex_1492 ! Mammillary princeps fasciculus
is_a: UBERON:0002316 ! white matter of neuraxis

[Term]
id: UBERON:0002724
name: limen of insula
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1493-FMA_75266
synonym: "angulus gyri olfactorii lateralis" EXACT [FMA:75266]
synonym: "insula limen" EXACT [FMA:75266]
xref: FMA:75266 ! Limen of insula
xref: NIF_GrossAnatomy:birnlex_1493 ! Limen of insula
is_a: UBERON:0000464 ! anatomical space

[Term]
id: UBERON:0002725
name: mammillotegmental fasciculus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1497-FMA_62058
synonym: "gudden tract" EXACT [FMA:62058]
synonym: "mammillotegmental tract" EXACT [FMA:62058]
synonym: "von Gudden's tract" EXACT [FMA:62058]
synonym: "von gudden's tract" EXACT []
xref: FMA:62058 ! Mammillotegmental fasciculus
xref: NIF_GrossAnatomy:birnlex_1497 ! Mammillotegmental fasciculus
is_a: UBERON:0002316 ! white matter of neuraxis

[Term]
id: UBERON:0002726
name: cervical spinal cord
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1499-FMA_71166
synonym: "cervical segments of spinal cord [1-8]" EXACT [FMA:71166]
synonym: "cervical spinal cord" EXACT [FMA:71166]
xref: FMA:71166 ! Cervical segment of spinal cord
xref: NIF_GrossAnatomy:birnlex_1499 ! Cervical spinal cord
is_a: UBERON:0001948 ! regional part of spinal cord
xref: ncithesaurus:Cervical_Spinal_Cord ! Cervical Spinal Cord

[Term]
id: UBERON:0002727
name: medial medullary lamina
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1501-FMA_62470
synonym: "inner medullary lamina" EXACT [FMA:62470]
synonym: "internal medullary lamina of corpus striatum" EXACT [FMA:62470]
synonym: "internal medullary lamina of globus pallidus" EXACT [FMA:62470]
synonym: "internal medullary lamina of lentiform nucleus" EXACT [FMA:62470]
synonym: "medial medullary lamina" EXACT [FMA:62470]
synonym: "medial medullary lamina of corpus striatum" EXACT [FMA:62470]
synonym: "medial medullary lamina of pallidum" EXACT [FMA:62470]
synonym: "medial medullary stria" EXACT [FMA:62470]
xref: FMA:62470 ! Medial medullary lamina of globus pallidus
xref: NIF_GrossAnatomy:birnlex_1501 ! Medial medullary lamina
is_a: UBERON:0002316 ! white matter of neuraxis
relationship: part_of UBERON:0001875 ! globus pallidus

[Term]
id: UBERON:0002728
name: entorhinal cortex
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1508-FMA_72356
def: "." [Wikipedia:Entorhinal_cortex]
subset: uberon_slim
synonym: "area 28 of Brodmann (Crosby)" EXACT [FMA:72356]
synonym: "area 28 of brodmann (crosby)" EXACT []
synonym: "entorhinal cortex" EXACT [FMA:72356]
synonym: "secondary olfactory cortex" EXACT [FMA:72356]
synonym: "secondary olfactory cortical area (Carpenter)" EXACT [FMA:72356]
synonym: "secondary olfactory cortical area (carpenter)" EXACT []
xref: FMA:72356 ! Entorhinal area
xref: NIF_GrossAnatomy:birnlex_1508 ! Entorhinal cortex
is_a: UBERON:0000064 ! organ part

[Term]
id: UBERON:0002729
name: claustral amygdaloid area
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1515-FMA_61869
synonym: "claustrum diffusa" EXACT [FMA:61869]
synonym: "claustrum parvum" EXACT [FMA:61869]
synonym: "ventral claustrum" EXACT [FMA:61869]
synonym: "ventral portion of claustrum" EXACT [FMA:61869]
xref: FMA:61869 ! Claustral amygdaloid area
xref: NIF_GrossAnatomy:birnlex_1515 ! Claustral amygdaloid area
is_a: UBERON:0002020 ! gray matter of neuraxis
relationship: part_of UBERON:0001876 ! amygdala

[Term]
id: UBERON:0002730
name: regional part of thalamus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1517-FMA_67705
synonym: "segment of thalamus" EXACT [NIF_GrossAnatomy:birnlex_1517]
synonym: "thalamus segment" EXACT [FMA:67705]
xref: FMA:67705 ! Segment of thalamus
xref: NIF_GrossAnatomy:birnlex_1517 ! Regional part of thalamus
is_a: UBERON:0002784 ! regional part of diencephalon
intersection_of: UBERON:0002616 ! regional part of brain
intersection_of: part_of UBERON:0001897 ! thalamus

[Term]
id: UBERON:0002731
name: vestibulocochlear nerve root
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1519-FMA_72499
synonym: "central part of vestibulocochlear nerve" EXACT [FMA:72499]
synonym: "statoacoustic nerve fibers" EXACT [FMA:72499]
synonym: "vestibulocochlear nerve fibers" EXACT [FMA:72499]
synonym: "vestibulocochlear nerve roots" EXACT [FMA:72499]
xref: FMA:72499 ! Vestibulocochlear nerve tract
xref: NIF_GrossAnatomy:birnlex_1519 ! Vestibulocochlear nerve root
is_a: UBERON:0000064 ! organ part

[Term]
id: UBERON:0002732
name: longitudinal pontine fibers
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1523-FMA_72513
synonym: "longitudinal fasciculus of the pons" EXACT [FMA:72513]
synonym: "longitudinal pontine fibers" EXACT [FMA:72513]
synonym: "longitudinal pontine fibres" EXACT [FMA:72513]
xref: FMA:72513 ! Longitudinal pontine tract
xref: NIF_GrossAnatomy:birnlex_1523 ! Longitudinal pontine fibers
is_a: UBERON:0002316 ! white matter of neuraxis

[Term]
id: UBERON:0002733
name: intralaminar nuclear group
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1530-FMA_62021
def: "." [Wikipedia:Intralaminar_thalamic_nuclei]
subset: uberon_slim
synonym: "intralaminar nuclear group" EXACT [FMA:62021]
synonym: "intralaminar nuclei of thalamus" EXACT [FMA:62021]
synonym: "intralaminar thalamic nuclei" EXACT [FMA:62021]
synonym: "nonspecific thalamic system" EXACT [FMA:62021]
xref: FMA:62021 ! Intralaminar nuclear group of thalamus
xref: NIF_GrossAnatomy:birnlex_1530 ! Intralaminar nuclear group
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0001897 ! thalamus

[Term]
id: UBERON:0002734
name: superior temporal sulcus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1534-FMA_83783
synonym: "parallel sulcus" EXACT [FMA:83783]
synonym: "sulcus t1" EXACT [FMA:83783]
synonym: "superior temporal fissure" EXACT [FMA:83783]
xref: FMA:83783 ! Superior temporal sulcus
xref: NIF_GrossAnatomy:birnlex_1534 ! Superior temporal sulcus
is_a: UBERON:0000093 ! sulcus
xref: ncithesaurus:Superior_Temporal_Sulcus ! Superior Temporal Sulcus

[Term]
id: UBERON:0002735
name: transverse pontine fibers
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1535-FMA_72514
synonym: "superficial transverse fibers of pons" EXACT [FMA:72514]
synonym: "transverse fibers of pons" EXACT [FMA:72514]
synonym: "transverse pontine fibers" EXACT [FMA:72514]
synonym: "transverse pontine fibres" EXACT [FMA:72514]
xref: FMA:72514 ! Transverse pontine tract
xref: NIF_GrossAnatomy:birnlex_1535 ! Transverse pontine fibers
is_a: UBERON:0002316 ! white matter of neuraxis

[Term]
id: UBERON:0002736
name: lateral nuclear group
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1537-FMA_62174
def: "." [Wikipedia:Lateral_nuclear_group]
subset: uberon_slim
synonym: "lateral nuclear group" EXACT [FMA:62174]
synonym: "lateral nucleus of thalamus" EXACT [FMA:62174]
synonym: "lateral thalamic nuclei" EXACT [FMA:62174]
xref: FMA:62174 ! Lateral nuclear group of thalamus
xref: NIF_GrossAnatomy:birnlex_1537 ! Lateral nuclear group
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0001897 ! thalamus

[Term]
id: UBERON:0002737
name: lateral inferior limiting sulcus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1540-FMA_74523
xref: FMA:74523 ! Lateral inferior limiting sulcus
xref: NIF_GrossAnatomy:birnlex_1540 ! Lateral inferior limiting sulcus
is_a: UBERON:0000093 ! sulcus

[Term]
id: UBERON:0002738
name: isthmus of cingulate gyrus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1541-FMA_62502
synonym: "cingulate gyrus isthmus" EXACT [FMA:62502]
synonym: "isthmus of fornicate gyrus" EXACT [FMA:62502]
synonym: "isthmus of limbic lobe" EXACT [FMA:62502]
xref: FMA:62502 ! Isthmus of cingulate gyrus
xref: NIF_GrossAnatomy:birnlex_1541 ! Isthmus of cingulate gyrus
is_a: UBERON:0000064 ! organ part

[Term]
id: UBERON:0002739
name: medial dorsal nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1543-FMA_62156
def: "." [Wikipedia:Medial_dorsal_nucleus]
subset: uberon_slim
synonym: "dorsal medial nucleus of thalamus" EXACT [FMA:62156]
synonym: "dorsomedial nuclear group" EXACT [FMA:62156]
synonym: "dorsomedial nucleus" EXACT [FMA:62156]
synonym: "dorsomedial nucleus of thalamus" EXACT [FMA:62156]
synonym: "medial dorsal nucleus" EXACT [FMA:62156]
synonym: "medial dorsal nucleus of thalamus" EXACT [FMA:62156]
synonym: "medial nuclear group" EXACT [FMA:62156]
synonym: "medial thalamic nuclei" EXACT [FMA:62156]
synonym: "medial thalamic nucleus" EXACT [FMA:62156]
synonym: "mediodorsal nucleus" EXACT [FMA:62156]
synonym: "mediodorsal thalamic nucleus" EXACT [FMA:62156]
xref: FMA:62156 ! Medial nuclear group of thalamus
xref: NIF_GrossAnatomy:birnlex_1543 ! Medial dorsal nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0001897 ! thalamus
xref: BTO:0002453 ! medial dorsal nucleus of thalamus

[Term]
id: UBERON:0002740
name: posterior cingulate gyrus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1546-FMA_61924
def: "." [Wikipedia:Posterior_cingulate_gyrus]
subset: uberon_slim
xref: FMA:61924 ! Posterior cingulate gyrus
xref: NIF_GrossAnatomy:birnlex_1546 ! Posterior cingulate gyrus
is_a: UBERON:0000200 ! gyrus

[Term]
id: UBERON:0002741
name: diagonal band
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1551-FMA_61973
def: "." [Wikipedia:Diagonal_band_of_Broca]
subset: uberon_slim
synonym: "broca's diagonal band" EXACT [FMA:61973]
synonym: "broca's diagonal gyrus" EXACT [FMA:61973]
synonym: "diagonal band of Broca" EXACT [FMA:61973]
synonym: "diagonal band of broca" EXACT []
synonym: "diagonal gyrus" EXACT [FMA:61973]
synonym: "olfactory fasciculus" EXACT [FMA:61973]
synonym: "olfactory radiations of Zuckerkandl" EXACT [FMA:61973]
synonym: "olfactory radiations of zuckerkandl" EXACT []
xref: FMA:61973 ! Diagonal band
xref: NIF_GrossAnatomy:birnlex_1551 ! Diagonal band
is_a: UBERON:0002316 ! white matter of neuraxis
xref: BTO:0002445 ! diagonal band

[Term]
id: UBERON:0002742
name: lamina of septum pellucidum
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1554-FMA_62472
synonym: "septum pellucidum lamina" EXACT [FMA:62472]
xref: FMA:62472 ! Lamina of septum pellucidum
xref: NIF_GrossAnatomy:birnlex_1554 ! Lamina of septum pellucidum
is_a: UBERON:0002316 ! white matter of neuraxis

[Term]
id: UBERON:0002743
name: basal forebrain
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1560-FMA_77700
def: "." [Wikipedia:Basal_forebrain]
subset: uberon_slim
xref: FMA:77700 ! Basal forebrain
xref: NIF_GrossAnatomy:birnlex_1560 ! Basal forebrain
is_a: UBERON:0002616 ! regional part of brain
xref: BTO:0002444 ! basal forebrain

[Term]
id: UBERON:0002744
name: hilum of dentate nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1561-FMA_72548
synonym: "dentate nuclear hilum" EXACT [FMA:72548]
xref: FMA:72548 ! Hilum of dentate nucleus
xref: NIF_GrossAnatomy:birnlex_1561 ! Hilum of dentate nucleus
is_a: UBERON:0002316 ! white matter of neuraxis

[Term]
id: UBERON:0002745
name: ventral amygdalofugal projection
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1563-FMA_61977
xref: FMA:61977 ! Ventral amygdalofugal projection
xref: NIF_GrossAnatomy:birnlex_1563 ! Ventral amygdalofugal projection
is_a: UBERON:0002316 ! white matter of neuraxis

[Term]
id: UBERON:0002746
name: intermediate periventricular nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1564-FMA_62328
synonym: "intermediate periventricular nucleus of hypothalamus" EXACT [FMA:62328]
synonym: "periventricular nucleus at the tuberal level" EXACT [FMA:62328]
xref: FMA:62328 ! Intermediate periventricular nucleus
xref: NIF_GrossAnatomy:birnlex_1564 ! Intermediate periventricular nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0002747
name: neodentate part of dentate nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1567-FMA_72539
synonym: "neodentate portion of dentate nucleus" EXACT [FMA:72539]
xref: FMA:72539 ! Neodentate part of dentate nucleus
xref: NIF_GrossAnatomy:birnlex_1567 ! Neodentate part of dentate nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis
relationship: part_of UBERON:0002132 ! dentate nucleus

[Term]
id: UBERON:0002748
name: medial lemniscus of medulla
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1570-FMA_72621
xref: FMA:72621 ! Medial lemniscus of medulla
xref: NIF_GrossAnatomy:birnlex_1570 ! Medial lemniscus of medulla
is_a: UBERON:0003002 ! medial lemniscus
intersection_of: UBERON:0003002 ! medial lemniscus
intersection_of: part_of UBERON:0000958 ! medulla
relationship: part_of UBERON:0001896 ! medulla oblongata

[Term]
id: UBERON:0002749
name: regional part of cerebellar cortex
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1571-FMA_76924
synonym: "cerebellar cortical segment" EXACT [FMA:76924]
synonym: "segment of cerebellar cortex" EXACT [NIF_GrossAnatomy:birnlex_1571]
xref: FMA:76924 ! Segment of cerebellar cortex
xref: NIF_GrossAnatomy:birnlex_1571 ! Regional part of cerebellar cortex
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002616 ! regional part of brain
intersection_of: UBERON:0002616 ! regional part of brain
intersection_of: part_of UBERON:0002129 ! cerebellar cortex

[Term]
id: UBERON:0002750
name: medial longitudinal fasciculus of medulla
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1574-FMA_72618
xref: FMA:72618 ! Medial longitudinal fasciculus of medulla
xref: NIF_GrossAnatomy:birnlex_1574 ! Medial longitudinal fasciculus of medulla
is_a: UBERON:0002309 ! medial longitudinal fasciculus
intersection_of: UBERON:0002309 ! medial longitudinal fasciculus
intersection_of: part_of UBERON:0000958 ! medulla
relationship: part_of UBERON:0001896 ! medulla oblongata

[Term]
id: UBERON:0002751
name: inferior temporal gyrus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1577-FMA_61907
def: "." [Wikipedia:Inferior_temporal_gyrus]
subset: uberon_slim
synonym: "lateral occipitotemporal gyrus (Heimer-83)" EXACT [FMA:61907]
synonym: "lateral occipitotemporal gyrus (heimer-83)" EXACT []
xref: FMA:61907 ! Inferior temporal gyrus
xref: NIF_GrossAnatomy:birnlex_1577 ! Inferior temporal gyrus
is_a: UBERON:0000200 ! gyrus
relationship: part_of UBERON:0001871 ! temporal lobe
xref: ncithesaurus:Inferior_Temporal_Gyrus ! Inferior Temporal Gyrus

[Term]
id: UBERON:0002752
name: olivocerebellar tract
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1579-FMA_72638
def: "." [Wikipedia:Olivocerebellar_tract]
subset: uberon_slim
xref: FMA:72638 ! Olivocerebellar tract
xref: NIF_GrossAnatomy:birnlex_1579 ! Olivocerebellar tract
is_a: UBERON:0002316 ! white matter of neuraxis
relationship: part_of UBERON:0001896 ! medulla oblongata

[Term]
id: UBERON:0002753
name: posterior spinocerebellar tract
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1585-FMA_72641
def: "." [Wikipedia:Posterior_spinocerebellar_tract]
subset: uberon_slim
synonym: "dorsal spinocerebellar tract" EXACT [FMA:72641]
synonym: "flechsig's tract" EXACT [FMA:72641]
xref: FMA:72641 ! Posterior spinocerebellar tract
xref: NIF_GrossAnatomy:birnlex_1585 ! Posterior spinocerebellar tract
is_a: UBERON:0002316 ! white matter of neuraxis

[Term]
id: UBERON:0002754
name: predorsal bundle
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1590-FMA_72614
synonym: "predorsal bundle of Edinger" EXACT [FMA:72614]
synonym: "predorsal bundle of edinger" EXACT []
synonym: "predorsal fasciculus" EXACT [FMA:72614]
synonym: "tectospinal fibers" EXACT [FMA:72614]
xref: FMA:72614 ! Predorsal bundle
xref: NIF_GrossAnatomy:birnlex_1590 ! Predorsal bundle
is_a: UBERON:0000477 ! anatomical cluster
relationship: part_of UBERON:0001896 ! medulla oblongata

[Term]
id: UBERON:0002755
name: pyramidal decussation
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1594-FMA_72633
def: "." [Wikipedia:Pyramidal_decussation]
subset: uberon_slim
synonym: "corticospinal decussation" EXACT [FMA:72633]
synonym: "decussation of corticospinal tract" EXACT [FMA:72633]
synonym: "decussation of pyramidal tract fibers" EXACT [FMA:72633]
synonym: "decussation of pyramids" EXACT [FMA:72633]
synonym: "decussation of pyramids of medulla" EXACT [FMA:72633]
synonym: "motor decussation" EXACT [FMA:72633]
synonym: "motor decussation of medulla" EXACT [FMA:72633]
xref: FMA:72633 ! Pyramidal decussation
xref: NIF_GrossAnatomy:birnlex_1594 ! Pyramidal decussation
is_a: UBERON:0002316 ! white matter of neuraxis
relationship: part_of UBERON:0001896 ! medulla oblongata

[Term]
id: UBERON:0002756
name: anterior cingulate gyrus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1603-FMA_61916
def: "." [Wikipedia:Anterior_cingulate_gyrus]
subset: uberon_slim
xref: FMA:61916 ! Anterior cingulate gyrus
xref: NIF_GrossAnatomy:birnlex_1603 ! Anterior cingulate gyrus
is_a: UBERON:0000200 ! gyrus

[Term]
id: UBERON:0002757
name: regional part of epithalamus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1607-FMA_62013
synonym: "epithalamus segment" EXACT [FMA:62013]
synonym: "segment of epithalamus" EXACT [NIF_GrossAnatomy:birnlex_1607]
xref: FMA:62013 ! Segment of epithalamus
xref: NIF_GrossAnatomy:birnlex_1607 ! Regional part of epithalamus
is_a: UBERON:0002784 ! regional part of diencephalon
intersection_of: UBERON:0002616 ! regional part of brain
intersection_of: part_of UBERON:0001899 ! epithalamus

[Term]
id: UBERON:0002758
name: dorsal nucleus of medial geniculate body
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1608-FMA_62216
synonym: "dorsal nucleus of medial geniculate complex" EXACT [FMA:62216]
xref: FMA:62216 ! Dorsal nucleus of medial geniculate body
xref: NIF_GrossAnatomy:birnlex_1608 ! Dorsal nucleus of medial geniculate body
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0001927 ! medial geniculate body
xref: BTO:0002673 ! dorsal nucleus of medial geniculate body

[Term]
id: UBERON:0002759
name: magnocellular nucleus of medial geniculate body
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1612-FMA_62218
synonym: "medial division of medial geniculate body" EXACT [FMA:62218]
synonym: "medial geniculate complex, medial part" EXACT [FMA:62218]
synonym: "medial geniculate nucleus, medial part" EXACT [FMA:62218]
synonym: "medial magnocellular nucleus of medial geniculate body" EXACT [FMA:62218]
synonym: "medial nucleus of medial geniculate body" EXACT [FMA:62218]
xref: FMA:62218 ! Magnocellular nucleus of medial geniculate body
xref: NIF_GrossAnatomy:birnlex_1612 ! Magnocellular nucleus of medial geniculate body
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0001927 ! medial geniculate body
xref: BTO:0002672 ! medial nucleus of medial geniculate body

[Term]
id: UBERON:0002760
name: ventral corticospinal tract
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1618-FMA_72636
def: "." [Wikipedia:Ventral_corticospinal_tract]
subset: uberon_slim
synonym: "anterior corticospinal tract" EXACT [FMA:72636]
synonym: "anterior pyramidal tract" EXACT [FMA:72636]
synonym: "anterior tract of Turck" EXACT [FMA:72636]
synonym: "anterior tract of turck" EXACT []
synonym: "bundle of Turck" EXACT [FMA:72636]
synonym: "bundle of turck" EXACT []
synonym: "column of Turck" EXACT [FMA:72636]
synonym: "column of turck" EXACT []
xref: FMA:72636 ! Ventral corticospinal tract
xref: NIF_GrossAnatomy:birnlex_1618 ! Ventral corticospinal tract
is_a: UBERON:0002316 ! white matter of neuraxis
relationship: part_of UBERON:0001896 ! medulla oblongata

[Term]
id: UBERON:0002761
name: inferior frontal sulcus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1619-FMA_83757
def: "." [Wikipedia:Inferior_frontal_sulcus]
subset: uberon_slim
synonym: "inferior frontal fissure" EXACT [FMA:83757]
synonym: "sulcus f2" EXACT [FMA:83757]
xref: FMA:83757 ! Inferior frontal sulcus
xref: NIF_GrossAnatomy:birnlex_1619 ! Inferior frontal sulcus
is_a: UBERON:0000093 ! sulcus
xref: ncithesaurus:Inferior_Frontal_Sulcus ! Inferior Frontal Sulcus

[Term]
id: UBERON:0002762
name: internal medullary lamina of thalamus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1621-FMA_62079
synonym: "internal medullary lamina of thalamus" EXACT [FMA:62079]
xref: FMA:62079 ! Internal medullary lamina
xref: NIF_GrossAnatomy:birnlex_1621 ! Internal medullary lamina of thalamus
is_a: UBERON:0002316 ! white matter of neuraxis

[Term]
id: UBERON:0002763
name: accessory medullary lamina
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1626-FMA_62471
synonym: "accessory medullary lamina" EXACT [FMA:62471]
synonym: "accessory medullary lamina of corpus striatum" EXACT [FMA:62471]
synonym: "incomplete medullary lamina of globus pallidus" EXACT [FMA:62471]
xref: FMA:62471 ! Accessory medullary lamina of globus pallidus
xref: NIF_GrossAnatomy:birnlex_1626 ! Accessory medullary lamina
is_a: UBERON:0002316 ! white matter of neuraxis
relationship: part_of UBERON:0001875 ! globus pallidus

[Term]
id: UBERON:0002764
name: inferior precentral sulcus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1627-FMA_83764
synonym: "inferior part of precentral fissure" EXACT [FMA:83764]
xref: FMA:83764 ! Inferior precentral sulcus
xref: NIF_GrossAnatomy:birnlex_1627 ! Inferior precentral sulcus
is_a: UBERON:0000093 ! sulcus

[Term]
id: UBERON:0002765
name: lateral medullary lamina
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1634-FMA_62469
synonym: "external medullary lamina of corpus striatum" EXACT [FMA:62469]
synonym: "external medullary lamina of globus pallidus" EXACT [FMA:62469]
synonym: "external medullary lamina of lentiform nucleus" EXACT [FMA:62469]
synonym: "lateral medullary lamina" EXACT [FMA:62469]
synonym: "lateral medullary lamina of corpus striatum" EXACT [FMA:62469]
synonym: "lateral medullary lamina of pallidum" EXACT [FMA:62469]
synonym: "lateral medullary stria" EXACT [FMA:62469]
synonym: "outer medullary lamina" EXACT [FMA:62469]
xref: FMA:62469 ! Lateral medullary lamina of globus pallidus
xref: NIF_GrossAnatomy:birnlex_1634 ! Lateral medullary lamina
is_a: UBERON:0002316 ! white matter of neuraxis
relationship: part_of UBERON:0001875 ! globus pallidus

[Term]
id: UBERON:0002766
name: fusiform gyrus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1641-FMA_61908
def: "." [Wikipedia:Fusiform_gyrus]
subset: uberon_slim
synonym: "lateral occipitotemporal gyrus" EXACT [FMA:61908]
synonym: "medial occipitotemporal gyrus-1 (Heimer)" EXACT [FMA:61908]
synonym: "medial occipitotemporal gyrus-1 (heimer)" EXACT []
synonym: "occipitotemporal gyrus" EXACT [FMA:61908]
xref: FMA:61908 ! Fusiform gyrus
xref: NIF_GrossAnatomy:birnlex_1641 ! Fusiform gyrus
is_a: UBERON:0000200 ! gyrus
relationship: part_of UBERON:0001871 ! temporal lobe

[Term]
id: UBERON:0002767
name: inferior rostral sulcus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1642-FMA_83767
xref: FMA:83767 ! Inferior rostral sulcus
xref: NIF_GrossAnatomy:birnlex_1642 ! Inferior rostral sulcus
is_a: UBERON:0000093 ! sulcus

[Term]
id: UBERON:0002768
name: vestibulospinal tract
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1643-FMA_72646
def: "a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body in the vestibular nucleus of the pons towards target cells in the spinal cord[GO]." [Wikipedia:Vestibulospinal_tract]
subset: uberon_slim
xref: FMA:72646 ! Vestibulospinal tract
xref: NIF_GrossAnatomy:birnlex_1643 ! Vestibulospinal tract
is_a: UBERON:0002316 ! white matter of neuraxis
relationship: part_of UBERON:0001896 ! medulla oblongata

[Term]
id: UBERON:0002769
name: superior temporal gyrus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1648-FMA_61905
def: "." [Wikipedia:Superior_temporal_gyrus]
subset: uberon_slim
xref: FMA:61905 ! Superior temporal gyrus
xref: NIF_GrossAnatomy:birnlex_1648 ! Superior temporal gyrus
is_a: UBERON:0000200 ! gyrus
relationship: part_of UBERON:0001871 ! temporal lobe
xref: ncithesaurus:Superior_Temporal_Gyrus ! Superior Temporal Gyrus

[Term]
id: UBERON:0002770
name: posterior hypothalamic region
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1651-FMA_62029
synonym: "mammillary level of hypothalamus" EXACT [FMA:62029]
synonym: "mammillary region" EXACT [FMA:62029]
synonym: "posterior hypothalamus" EXACT [FMA:62029]
xref: FMA:62029 ! Posterior hypothalamic region
xref: NIF_GrossAnatomy:birnlex_1651 ! Posterior hypothalamic region
is_a: UBERON:0000477 ! anatomical cluster
relationship: part_of UBERON:0001898 ! hypothalamus

[Term]
id: UBERON:0002771
name: middle temporal gyrus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1653-FMA_61906
def: "." [Wikipedia:Middle_temporal_gyrus]
subset: uberon_slim
synonym: "intermediate temporal gyrus" EXACT [FMA:61906]
xref: FMA:61906 ! Middle temporal gyrus
xref: NIF_GrossAnatomy:birnlex_1653 ! Middle temporal gyrus
is_a: UBERON:0000200 ! gyrus
relationship: part_of UBERON:0001871 ! temporal lobe
xref: ncithesaurus:Middle_Temporal_Gyrus ! Middle Temporal Gyrus

[Term]
id: UBERON:0002772
name: olfactory sulcus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1655-FMA_83769
def: "." [Wikipedia:Olfactory_sulcus]
subset: uberon_slim
xref: FMA:83769 ! Olfactory sulcus
xref: NIF_GrossAnatomy:birnlex_1655 ! Olfactory sulcus
is_a: UBERON:0000093 ! sulcus
xref: ncithesaurus:Olfactory_Sulcus ! Olfactory Sulcus

[Term]
id: UBERON:0002773
name: anterior transverse temporal gyrus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1657-FMA_61909
synonym: "anterior transverse temporal convolution of Heschl" EXACT [FMA:61909]
synonym: "anterior transverse temporal convolution of heschl" EXACT []
synonym: "first transverse gyrus of Heschl" EXACT [FMA:61909]
synonym: "first transverse gyrus of heschl" EXACT []
synonym: "great transverse gyrus of Heschl" EXACT [FMA:61909]
synonym: "great transverse gyrus of heschl" EXACT []
xref: FMA:61909 ! Anterior transverse temporal gyrus
xref: NIF_GrossAnatomy:birnlex_1657 ! Anterior transverse temporal gyrus
is_a: UBERON:0000200 ! gyrus
relationship: part_of UBERON:0001871 ! temporal lobe

[Term]
id: UBERON:0002774
name: posterior transverse temporal gyrus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1661-FMA_61910
synonym: "posterior transverse temporal convolution of Heschl" EXACT [FMA:61910]
synonym: "posterior transverse temporal convolution of heschl" EXACT []
xref: FMA:61910 ! Posterior transverse temporal gyrus
xref: NIF_GrossAnatomy:birnlex_1661 ! Posterior transverse temporal gyrus
is_a: UBERON:0000200 ! gyrus
relationship: part_of UBERON:0001871 ! temporal lobe

[Term]
id: UBERON:0002775
name: olivocochlear bundle
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1666-FMA_72485
synonym: "bundle of Rasmussen" EXACT [FMA:72485]
synonym: "bundle of rasmussen" EXACT []
synonym: "efferent cochlear bundle" EXACT [FMA:72485]
synonym: "olivocochlear bundle of Rasmussen" EXACT [FMA:72485]
synonym: "olivocochlear bundle of rasmussen" EXACT []
synonym: "olivocochlear tract" EXACT [FMA:72485]
xref: FMA:72485 ! Olivocochlear bundle
xref: NIF_GrossAnatomy:birnlex_1666 ! Olivocochlear bundle
is_a: UBERON:0002316 ! white matter of neuraxis

[Term]
id: UBERON:0002776
name: ventral nuclear group
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1669-FMA_62022
def: "." [Wikipedia:Ventral_nuclear_group]
subset: uberon_slim
synonym: "ventral nuclear group" EXACT [FMA:62022]
synonym: "ventral nuclear mass" EXACT [FMA:62022]
synonym: "ventral nuclei of thalamus" EXACT [FMA:62022]
synonym: "ventral tier thalamic nuclei" EXACT [FMA:62022]
xref: FMA:62022 ! Ventral nuclear group of thalamus
xref: NIF_GrossAnatomy:birnlex_1669 ! Ventral nuclear group
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0001897 ! thalamus

[Term]
id: UBERON:0002777
name: neostriatum
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1672-FMA_77617
def: "." [Wikipedia:Neostriatum]
subset: uberon_slim
xref: BTO:0000418
xref: FMA:77617 ! Neostriatum
xref: NIF_GrossAnatomy:birnlex_1672 ! Striatum
is_a: UBERON:0002020 ! gray matter of neuraxis
relationship: has_part UBERON:0001873 ! caudate nucleus
relationship: has_part UBERON:0001874 ! putamen

[Term]
id: UBERON:0002778
name: ventral pallidum
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1674-FMA_77613
xref: FMA:77613 ! Ventral pallidum
xref: NIF_GrossAnatomy:birnlex_1674 ! Ventral pallidum
is_a: UBERON:0002020 ! gray matter of neuraxis

[Term]
id: UBERON:0002779
name: lateral superior olivary nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1675-FMA_72472
def: "." [Wikipedia:Accessory_olivary_nucleus]
subset: uberon_slim
synonym: "accessory olivary nucleus" EXACT [FMA:72472]
synonym: "accessory superior olivary nucleus" EXACT [FMA:72472]
synonym: "accessory superior olive" EXACT [FMA:72472]
synonym: "lateral superior olive" EXACT [FMA:72472]
synonym: "superior olivary nucleus, lateral part" EXACT [FMA:72472]
xref: FMA:72472 ! Lateral superior olivary nucleus
xref: NIF_GrossAnatomy:birnlex_1675 ! Lateral superior olivary nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0002128 ! superior olivary complex

[Term]
id: UBERON:0002780
name: regional part of forebrain
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1677-FMA_61996
synonym: "forebrain segment" EXACT [FMA:61996]
synonym: "segment of forebrain" EXACT [NIF_GrossAnatomy:birnlex_1677]
xref: FMA:61996 ! Segment of forebrain
xref: NIF_GrossAnatomy:birnlex_1677 ! Regional part of forebrain
is_a: UBERON:0002616 ! regional part of brain
intersection_of: UBERON:0002616 ! regional part of brain
intersection_of: part_of UBERON:0001890 ! forebrain

[Term]
id: UBERON:0002781
name: caudal part of ventral posterolateral nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1681-FMA_62206
synonym: "ventral posterior lateral nucleus (Ilinsky)" EXACT [FMA:62206]
synonym: "ventral posterior lateral nucleus (ilinsky)" EXACT []
synonym: "ventral posterolateral nucleus, caudal part" EXACT [FMA:62206]
synonym: "ventral posterolateral thalamic nucleus, caudal part" EXACT [FMA:62206]
xref: FMA:62206 ! Caudal part of ventral posterolateral nucleus
xref: NIF_GrossAnatomy:birnlex_1681 ! Caudal part of ventral posterolateral nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis

[Term]
id: UBERON:0002782
name: medial superior olivary nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1682-FMA_72473
def: "." [Wikipedia:Medial_superior_olive]
subset: uberon_slim
synonym: "chief nucleus of superior olive" EXACT [FMA:72473]
synonym: "chief superior olivary nucleus" EXACT [FMA:72473]
synonym: "main superior olivary nucleus" EXACT [FMA:72473]
synonym: "medial superior olive" EXACT [FMA:72473]
synonym: "principal superior olivary nucleus" EXACT [FMA:72473]
synonym: "superior olivary nucleus, medial part" EXACT [FMA:72473]
xref: FMA:72473 ! Medial superior olivary nucleus
xref: NIF_GrossAnatomy:birnlex_1682 ! Medial superior olivary nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0002128 ! superior olivary complex

[Term]
id: UBERON:0002783
name: central tegmental tract of pons
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1683-FMA_72494
xref: FMA:72494 ! Central tegmental tract of pons
xref: NIF_GrossAnatomy:birnlex_1683 ! Central tegmental tract of pons
is_a: UBERON:0002316 ! white matter of neuraxis

[Term]
id: UBERON:0002784
name: regional part of diencephalon
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1685-FMA_62005
synonym: "diencephalon segment" EXACT [FMA:62005]
synonym: "segment of diencephalon" EXACT [NIF_GrossAnatomy:birnlex_1685]
xref: FMA:62005 ! Segment of diencephalon
xref: NIF_GrossAnatomy:birnlex_1685 ! Regional part of diencephalon
is_a: UBERON:0002780 ! regional part of forebrain
intersection_of: UBERON:0002616 ! regional part of brain
intersection_of: part_of UBERON:0001894 ! diencephalon

[Term]
id: UBERON:0002785
name: regional part of lateral hypothalamic region
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1687-FMA_62312
synonym: "lateral hypothalamic region segment" EXACT [FMA:62312]
synonym: "segment of lateral hypothalamic region" EXACT [NIF_GrossAnatomy:birnlex_1687]
xref: FMA:62312 ! Segment of lateral hypothalamic region
xref: NIF_GrossAnatomy:birnlex_1687 ! Regional part of lateral hypothalamic region
is_a: UBERON:0003048 ! regional part of hypothalamus

[Term]
id: UBERON:0002786
name: abducens nerve fibers
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1689-FMA_72491
synonym: "abducens nerve fibers" EXACT [FMA:72491]
synonym: "central part of abducens nerve" EXACT [FMA:72491]
synonym: "root of abducens nerve" EXACT [FMA:72491]
xref: FMA:72491 ! Abducens nerve tract
xref: NIF_GrossAnatomy:birnlex_1689 ! Abducens nerve fibers
is_a: UBERON:0002211 ! segment of nerve

[Term]
id: UBERON:0002787
name: decussation of trochlear nerve
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1690-FMA_72488
synonym: "decussation of trochlear nerve (IV)" EXACT [FMA:72488]
synonym: "decussation of trochlear nerve (iv)" EXACT []
synonym: "trochlear neural decussation" EXACT [FMA:72488]
xref: FMA:72488 ! Decussation of trochlear nerve
xref: NIF_GrossAnatomy:birnlex_1690 ! Decussation of trochlear nerve
is_a: UBERON:0002316 ! white matter of neuraxis

[Term]
id: UBERON:0002788
name: anterior nuclear group
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1692-FMA_62019
def: "." [Wikipedia:Anterior_nuclear_group]
subset: uberon_slim
synonym: "anterior nuclear group" EXACT [FMA:62019]
synonym: "anterior nuclei of thalamus" EXACT [FMA:62019]
synonym: "anterior nucleus of thalamus" EXACT [FMA:62019]
synonym: "anterior thalamic nuclei" EXACT [FMA:62019]
xref: FMA:62019 ! Anterior nuclear group of thalamus
xref: NIF_GrossAnatomy:birnlex_1692 ! Anterior nuclear group
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0001897 ! thalamus

[Term]
id: UBERON:0002789
name: regional part of posterior hypothalamic region
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1697-FMA_62311
synonym: "posterior hypothalamic region segment" EXACT [FMA:62311]
synonym: "segment of posterior hypothalamic region" EXACT [NIF_GrossAnatomy:birnlex_1697]
xref: FMA:62311 ! Segment of posterior hypothalamic region
xref: NIF_GrossAnatomy:birnlex_1697 ! Regional part of posterior hypothalamic region
is_a: UBERON:0003048 ! regional part of hypothalamus
intersection_of: UBERON:0002616 ! regional part of brain
intersection_of: part_of UBERON:0002770 ! posterior hypothalamic region

[Term]
id: UBERON:0002790
name: dorsal acoustic stria
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1698-FMA_72496
synonym: "posterior acoustic stria" EXACT [FMA:72496]
xref: FMA:72496 ! Dorsal acoustic stria
xref: NIF_GrossAnatomy:birnlex_1698 ! Dorsal acoustic stria
is_a: UBERON:0002316 ! white matter of neuraxis

[Term]
id: UBERON:0002791
name: regional part of telencephalon
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1700-FMA_62374
synonym: "segment of telencephalon" EXACT [NIF_GrossAnatomy:birnlex_1700]
synonym: "telencephalon segment" EXACT [FMA:62374]
xref: FMA:62374 ! Segment of telencephalon
xref: NIF_GrossAnatomy:birnlex_1700 ! Regional part of telencephalon
is_a: UBERON:0002780 ! regional part of forebrain
intersection_of: UBERON:0002616 ! regional part of brain
intersection_of: part_of UBERON:0001893 ! telencephalon

[Term]
id: UBERON:0002792
name: lumbar spinal cord
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1704-FMA_71168
def: "." [Wikipedia:Lumbar_spinal_cord]
subset: uberon_slim
synonym: "lumbar segments of spinal cord [1-5]" EXACT [FMA:71168]
synonym: "lumbar spinal cord" EXACT [FMA:71168]
xref: FMA:71168 ! Lumbar segment of spinal cord
xref: NIF_GrossAnatomy:birnlex_1704 ! Lumbar spinal cord
is_a: UBERON:0001948 ! regional part of spinal cord
xref: ncithesaurus:Lumbar_Spinal_Cord ! Lumbar Spinal Cord

[Term]
id: UBERON:0002793
name: dorsal longitudinal fasciculus of pons
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1707-FMA_72492
xref: FMA:72492 ! Dorsal longitudinal fasciculus of pons
xref: NIF_GrossAnatomy:birnlex_1707 ! Dorsal longitudinal fasciculus of pons
is_a: UBERON:0003045 ! dorsal longitudinal fasciculus
intersection_of: UBERON:0003045 ! dorsal longitudinal fasciculus
intersection_of: part_of UBERON:0000988 ! pons

[Term]
id: UBERON:0002794
name: medial longitudinal fasciculus of pons
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1708-FMA_72493
xref: FMA:72493 ! Medial longitudinal fasciculus of pons
xref: NIF_GrossAnatomy:birnlex_1708 ! Medial longitudinal fasciculus of pons
is_a: UBERON:0002309 ! medial longitudinal fasciculus
intersection_of: UBERON:0002309 ! medial longitudinal fasciculus
intersection_of: part_of UBERON:0000988 ! pons

[Term]
id: UBERON:0002795
name: frontal pole
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1716-FMA_74885
def: "." [Wikipedia:Frontal_pole]
subset: uberon_slim
xref: FMA:74885 ! Frontal pole
xref: NIF_GrossAnatomy:birnlex_1716 ! Frontal pole
is_a: UBERON:0000477 ! anatomical cluster

[Term]
id: UBERON:0002796
name: motor root of trigeminal nerve
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1717-FMA_52612
synonym: "motor branch of trigeminal nerve" EXACT [FMA:52612]
synonym: "motor root of Nervus V" EXACT [FMA:52612]
synonym: "motor root of nervus v" EXACT []
synonym: "radix motoria (Nervus trigeminus [V])" EXACT [FMA:52612]
synonym: "radix motoria (nervus trigeminus [v])" EXACT []
xref: FMA:52612 ! Motor root of trigeminal nerve
xref: NIF_GrossAnatomy:birnlex_1717 ! Motor root of trigeminal nerve
is_a: UBERON:0002211 ! segment of nerve

[Term]
id: UBERON:0002797
name: dorsal trigeminal tract
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1718-FMA_72500
def: "." [Wikipedia:Dorsal_trigeminal_tract]
subset: uberon_slim
synonym: "dorsal ascending trigeminal tract" EXACT [FMA:72500]
synonym: "dorsal division of trigeminal lemniscus" EXACT [FMA:72500]
synonym: "dorsal secondary ascending tract of V" EXACT [FMA:72500]
synonym: "dorsal secondary ascending tract of v" EXACT []
synonym: "dorsal secondary tract of V" EXACT [FMA:72500]
synonym: "dorsal secondary tract of v" EXACT []
synonym: "dorsal trigeminal lemniscus" EXACT [FMA:72500]
synonym: "dorsal trigeminal pathway" EXACT [FMA:72500]
synonym: "dorsal trigeminothalamic tract" EXACT [FMA:72500]
synonym: "posterior trigeminothalamic tract" EXACT [FMA:72500]
synonym: "reticulothalamic tract" EXACT [FMA:72500]
synonym: "uncrossed dorsal trigeminothalamic tract" EXACT [FMA:72500]
xref: FMA:72500 ! Dorsal trigeminal tract
xref: NIF_GrossAnatomy:birnlex_1718 ! Dorsal trigeminal tract
is_a: UBERON:0002316 ! white matter of neuraxis

[Term]
id: UBERON:0002798
name: spinothalamic tract of pons
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1719-FMA_72504
xref: FMA:72504 ! Spinothalamic tract of pons
xref: NIF_GrossAnatomy:birnlex_1719 ! Spinothalamic tract of pons
is_a: UBERON:0002944 ! spinothalamic tract of medulla
intersection_of: UBERON:0002944 ! spinothalamic tract of medulla
intersection_of: part_of UBERON:0000988 ! pons

[Term]
id: UBERON:0002799
name: fronto-orbital sulcus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1724-FMA_83768
synonym: "fronto-orbital dimple" EXACT [FMA:83768]
synonym: "orbito-frontal sulcus" EXACT [FMA:83768]
xref: FMA:83768 ! Fronto-orbital sulcus
xref: NIF_GrossAnatomy:birnlex_1724 ! Fronto-orbital sulcus
is_a: UBERON:0000093 ! sulcus

[Term]
id: UBERON:0002800
name: spinal trigeminal tract of pons
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1725-FMA_72507
xref: FMA:72507 ! Spinal trigeminal tract of pons
xref: NIF_GrossAnatomy:birnlex_1725 ! Spinal trigeminal tract of pons
is_a: UBERON:0002316 ! white matter of neuraxis

[Term]
id: UBERON:0002801
name: stratum zonale of thalamus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1727-FMA_83905
synonym: "neuraxis stratum" EXACT [FMA:83905]
xref: FMA:83905 ! Stratum zonale of thalamus
xref: NIF_GrossAnatomy:birnlex_1727 ! Stratum zonale of thalamus
is_a: UBERON:0002316 ! white matter of neuraxis

[Term]
id: UBERON:0002802
name: left parietal lobe
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1728-FMA_72974
xref: FMA:72974 ! Left parietal lobe
xref: NIF_GrossAnatomy:birnlex_1728 ! Left parietal lobe
is_a: UBERON:0001872 ! parietal lobe
relationship: adjacent_to UBERON:0002921 ! longitudinal fissure
relationship: disconnected_from UBERON:0002803 ! right parietal lobe

[Term]
id: UBERON:0002803
name: right parietal lobe
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1729-FMA_72973
xref: FMA:72973 ! Right parietal lobe
xref: NIF_GrossAnatomy:birnlex_1729 ! Right parietal lobe
is_a: UBERON:0001872 ! parietal lobe
relationship: adjacent_to UBERON:0002921 ! longitudinal fissure

[Term]
id: UBERON:0002804
name: left limbic lobe
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1780-FMA_72981
xref: FMA:72981 ! Left limbic lobe
xref: NIF_GrossAnatomy:birnlex_1780 ! Left limbic lobe
is_a: UBERON:0002600 ! limbic lobe

[Term]
id: UBERON:0002805
name: right limbic lobe
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1781-FMA_72980
xref: FMA:72980 ! Right limbic lobe
xref: NIF_GrossAnatomy:birnlex_1781 ! Right limbic lobe
is_a: UBERON:0002600 ! limbic lobe

[Term]
id: UBERON:0002806
name: left occipital lobe
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1782-FMA_72976
xref: FMA:72976 ! Left occipital lobe
xref: NIF_GrossAnatomy:birnlex_1782 ! Left occipital lobe
is_a: UBERON:0002021 ! occipital lobe
relationship: adjacent_to UBERON:0002921 ! longitudinal fissure
relationship: disconnected_from UBERON:0002807 ! right occipital lobe

[Term]
id: UBERON:0002807
name: right occipital lobe
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1783-FMA_72975
xref: FMA:72975 ! Right occipital lobe
xref: NIF_GrossAnatomy:birnlex_1783 ! Right occipital lobe
is_a: UBERON:0002021 ! occipital lobe
relationship: adjacent_to UBERON:0002921 ! longitudinal fissure

[Term]
id: UBERON:0002808
name: left temporal lobe
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1784-FMA_72972
xref: FMA:72972 ! Left temporal lobe
xref: NIF_GrossAnatomy:birnlex_1784 ! Left temporal lobe
is_a: UBERON:0001871 ! temporal lobe

[Term]
id: UBERON:0002809
name: right temporal lobe
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1785-FMA_72971
xref: FMA:72971 ! Right temporal lobe
xref: NIF_GrossAnatomy:birnlex_1785 ! Right temporal lobe
is_a: UBERON:0001871 ! temporal lobe

[Term]
id: UBERON:0002810
name: right frontal lobe
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1786-FMA_72969
xref: FMA:72969 ! Right frontal lobe
xref: NIF_GrossAnatomy:birnlex_1786 ! Right frontal lobe
is_a: UBERON:0001870 ! frontal lobe
relationship: adjacent_to UBERON:0002921 ! longitudinal fissure

[Term]
id: UBERON:0002811
name: left frontal lobe
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1787-FMA_72970
xref: FMA:72970 ! Left frontal lobe
xref: NIF_GrossAnatomy:birnlex_1787 ! Left frontal lobe
is_a: UBERON:0001870 ! frontal lobe
relationship: adjacent_to UBERON:0002921 ! longitudinal fissure
relationship: disconnected_from UBERON:0002810 ! right frontal lobe

[Term]
id: UBERON:0002812
name: left cerebral hemisphere
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1795-FMA_61819
xref: FMA:61819 ! Left cerebral hemisphere
xref: NIF_GrossAnatomy:birnlex_1795 ! Left cerebral hemisphere
is_a: UBERON:0001869 ! cerebral hemisphere
xref: ncithesaurus:Left_Cerebral_Hemisphere ! Left Cerebral Hemisphere

[Term]
id: UBERON:0002813
name: right cerebral hemisphere
alt_id: UBERON:NIF_GrossAnatomy_birnlex_1797-FMA_67292
xref: FMA:67292 ! Right cerebral hemisphere
xref: NIF_GrossAnatomy:birnlex_1797 ! Right cerebral hemisphere
is_a: UBERON:0001869 ! cerebral hemisphere
xref: ncithesaurus:Right_Cerebral_Hemisphere ! Right Cerebral Hemisphere

[Term]
id: UBERON:0002814
name: posterior superior fissure
alt_id: UBERON:NIF_GrossAnatomy_birnlex_20081254-FMA_83733
synonym: "post-clival fissure" EXACT [FMA:83733]
synonym: "postclival fissure" EXACT [FMA:83733]
synonym: "Posterior superior fissure" EXACT [FMA:83733, NIF_GrossAnatomy:birnlex_20081254]
synonym: "postlunate fissure" EXACT [FMA:83733]
xref: FMA:83733 ! Posterior superior fissure of cerebellum
xref: NIF_GrossAnatomy:birnlex_20081254
is_a: UBERON:0000464 ! anatomical space
relationship: part_of UBERON:0002037 ! cerebellum

[Term]
id: UBERON:0002815
name: horizontal fissure
alt_id: UBERON:NIF_GrossAnatomy_birnlex_20081255-FMA_14697
def: "." [Wikipedia:Horizontal_fissure_of_cerebellum]
synonym: "Horizontal fissure" EXACT [NIF_GrossAnatomy:birnlex_20081255]
synonym: "Horizontal fissure of cerebellum" EXACT [Wikipedia:Horizontal_fissure_of_cerebellum]
synonym: "horizontal fissure of cerebellum" EXACT []
synonym: "Horizontal sulcus" EXACT [Wikipedia:Horizontal_fissure_of_cerebellum]
synonym: "horizontal sulcus" EXACT []
xref: NIF_GrossAnatomy:birnlex_20081255
is_a: UBERON:0000464 ! anatomical space
relationship: part_of UBERON:0002037 ! cerebellum
xref: FMA:14697 ! Horizontal fissure
xref: FMA:75135 ! Horizontal fissure of cerebellum

[Term]
id: UBERON:0002816
name: prepyramidal fissure
alt_id: UBERON:NIF_GrossAnatomy_birnlex_20081257-FMA_75138
synonym: "prebiventral fissure of cerebellum" EXACT [FMA:75138]
synonym: "Prepyramidal fissure" EXACT [NIF_GrossAnatomy:birnlex_20081257]
synonym: "prepyramidal sulcus" EXACT [FMA:75138]
xref: FMA:75138 ! Prepyramidal fissure of cerebellum
xref: NIF_GrossAnatomy:birnlex_20081257
is_a: UBERON:0000464 ! anatomical space
relationship: part_of UBERON:0002037 ! cerebellum

[Term]
id: UBERON:0002817
name: secondary fissure
alt_id: UBERON:NIF_GrossAnatomy_birnlex_20081258-FMA_84043
synonym: "post-pyramidal fissure of cerebellum" EXACT [FMA:84043]
synonym: "postpyramidal fissure" EXACT [FMA:84043]
synonym: "Secondary fissure" EXACT [NIF_GrossAnatomy:birnlex_20081258]
synonym: "secondary fissure" EXACT [FMA:84043]
xref: FMA:84043 ! Secondary fissure of cerebellum
xref: NIF_GrossAnatomy:birnlex_20081258
is_a: UBERON:0000464 ! anatomical space
relationship: part_of UBERON:0002037 ! cerebellum

[Term]
id: UBERON:0002818
name: posterolateral fissure
alt_id: UBERON:NIF_GrossAnatomy_birnlex_20081259-FMA_83730
synonym: "dorsolateral fissure of cerebellum" EXACT [FMA:83730]
synonym: "Posterolateral fissure" EXACT [NIF_GrossAnatomy:birnlex_20081259]
synonym: "prenodular fissure" EXACT [FMA:83730]
synonym: "prenodular sulcus" EXACT [FMA:83730]
synonym: "uvulonodular fissure" EXACT [FMA:83730]
xref: FMA:83730 ! Posterolateral fissure of cerebellum
xref: NIF_GrossAnatomy:birnlex_20081259
is_a: UBERON:0000464 ! anatomical space
relationship: part_of UBERON:0002037 ! cerebellum

[Term]
id: UBERON:0002819
name: apex of cochlea
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2523-FMA_75641
def: "." [Wikipedia:Apex_of_cochlea]
subset: uberon_slim
synonym: "cochlea apex" EXACT [FMA:75641]
synonym: "cupula of cochlea" EXACT [FMA:75641]
xref: FMA:75641 ! Apex of cochlea
xref: NIF_GrossAnatomy:birnlex_2523 ! Apex of cochlea
is_a: UBERON:0000477 ! anatomical cluster

[Term]
id: UBERON:0002820
name: zona arcuata of basilar membrane of cochlea
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2528-FMA_75709
xref: FMA:75709 ! Zona arcuata of basilar membrane of cochlea
xref: NIF_GrossAnatomy:birnlex_2528 ! Zona arcuata of basilar membrane of cochlea
is_a: UBERON:0000476 ! acellular anatomical structure

[Term]
id: UBERON:0002821
name: zona arcuata of basilar membrane of cochlea
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2529-FMA_75709
xref: FMA:75709 ! Zona arcuata of basilar membrane of cochlea
xref: NIF_GrossAnatomy:birnlex_2529 ! Zona arcuata of basilar membrane of cochlea
is_a: UBERON:0000476 ! acellular anatomical structure

[Term]
id: UBERON:0002822
name: macula lutea proper
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2542-FMA_58671
xref: FMA:58671 ! Macula lutea proper
xref: NIF_GrossAnatomy:birnlex_2542 ! Macula lutea proper
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0000053 ! macula lutea

[Term]
id: UBERON:0002823
name: clivus of fovea centralis
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2544-FMA_58674
comment: NIF differs from FMA
synonym: "fovea centralis clivus" EXACT [FMA:58674]
xref: FMA:58674 ! Clivus of fovea centralis
xref: NIF_GrossAnatomy:birnlex_2544 ! Clivus of fovea centralis
is_a: UBERON:0000061 ! anatomical structure
relationship: part_of UBERON:0001786 ! fovea centralis

[Term]
id: UBERON:0002824
name: vestibular ganglion
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2549-FMA_53435
def: "." [Wikipedia:Vestibular_ganglion]
subset: uberon_slim
synonym: "scarpa's ganglion" EXACT [FMA:53435]
xref: FMA:53435 ! Vestibular ganglion
xref: NIF_GrossAnatomy:birnlex_2549 ! Vestibular ganglion
is_a: UBERON:0001714 ! ganglion of cranial nerve
xref: ncithesaurus:Vestibular_Ganglion ! Vestibular Ganglion

[Term]
id: UBERON:0002825
name: superior part of vestibular ganglion
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2551-FMA_77531
xref: FMA:77531 ! Superior part of vestibular ganglion
xref: NIF_GrossAnatomy:birnlex_2551 ! Superior part of vestibular ganglion
is_a: UBERON:0000064 ! organ part

[Term]
id: UBERON:0002826
name: inferior part of vestibular ganglion
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2552-FMA_77532
xref: FMA:77532 ! Inferior part of vestibular ganglion
xref: NIF_GrossAnatomy:birnlex_2552 ! Inferior part of vestibular ganglion
is_a: UBERON:0000064 ! organ part

[Term]
id: UBERON:0002827
name: auditory ganglion
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2564-ZFA_0000588
synonym: "auditory ganglion" EXACT [ZFA:0000588]
synonym: "gVIII" EXACT [ZFA:0000588]
synonym: "gviii" EXACT []
synonym: "sag" EXACT [ZFA:0000588]
synonym: "statoacoustic ganglia" EXACT [ZFA:0000588]
xref: NIF_GrossAnatomy:birnlex_2564 ! Auditory ganglion
xref: ZFA:0000588 ! statoacoustic (VIII) ganglion
is_a: UBERON:0002420 ! basal ganglia
relationship: part_of UBERON:0001690 ! ear

[Term]
id: UBERON:0002828
name: ventral cochlear nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2567-FMA_54621
def: "." [Wikipedia:Ventral_cochlear_nucleus]
subset: uberon_slim
synonym: "ventral cochlear nucleus" EXACT [FMA:54621]
xref: FMA:54621 ! Anterior cochlear nucleus
xref: NIF_GrossAnatomy:birnlex_2567 ! Ventral cochlear nucleus
is_a: UBERON:0001720 ! cochlear nucleus

[Term]
id: UBERON:0002829
name: dorsal cochlear nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2569-FMA_54624
def: "." [Wikipedia:Dorsal_cochlear_nucleus]
subset: uberon_slim
synonym: "dorsal cochlear nucleus" EXACT [FMA:54624]
synonym: "dorsal division of cochlear nucleus" EXACT [FMA:54624]
xref: FMA:54624 ! Posterior cochlear nucleus
xref: NIF_GrossAnatomy:birnlex_2569 ! Dorsal cochlear nucleus
is_a: UBERON:0001720 ! cochlear nucleus
xref: ncithesaurus:Dorsal_Cochlear_Nucleus ! Dorsal Cochlear Nucleus

[Term]
id: UBERON:0002830
name: anteroventral cochlear nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2572-FMA_72571
synonym: "anteroventral auditory nucleus" EXACT [FMA:72571]
xref: FMA:72571 ! Anteroventral cochlear nucleus
xref: NIF_GrossAnatomy:birnlex_2572 ! Anteroventral cochlear nucleus
is_a: UBERON:0001720 ! cochlear nucleus

[Term]
id: UBERON:0002831
name: posteroventral cochlear nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2573-FMA_72572
xref: FMA:72572 ! Posteroventral cochlear nucleus
xref: NIF_GrossAnatomy:birnlex_2573 ! Posteroventral cochlear nucleus
is_a: UBERON:0001720 ! cochlear nucleus

[Term]
id: UBERON:0002832
name: ventral nucleus of trapezoid body
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2576-FMA_72477
synonym: "anterior nucleus of trapezoid body" EXACT [FMA:72477]
xref: FMA:72477 ! Ventral nucleus of trapezoid body
xref: NIF_GrossAnatomy:birnlex_2576 ! Ventral nucleus of trapezoid body
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0002128 ! superior olivary complex

[Term]
id: UBERON:0002833
name: medial nucleus of trapezoid body
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2595-FMA_75732
xref: FMA:75732 ! Medial nucleus of trapezoid body
xref: NIF_GrossAnatomy:birnlex_2595 ! Medial nucleus of trapezoid body
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0002834
name: cervical dorsal root ganglion
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2599-FMA_6005
synonym: "cervical dorsal root ganglion" EXACT [FMA:6005]
xref: FMA:6005 ! Cervical spinal ganglion
xref: NIF_GrossAnatomy:birnlex_2599 ! Cervical dorsal root ganglion
is_a: UBERON:0000044 ! dorsal root ganglion

[Term]
id: UBERON:0002835
name: thoracic dorsal root ganglion
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2600-FMA_6006
synonym: "thoracic dorsal root ganglion" EXACT [FMA:6006]
xref: FMA:6006 ! Thoracic spinal ganglion
xref: NIF_GrossAnatomy:birnlex_2600 ! Thoracic dorsal root ganglion
is_a: UBERON:0000044 ! dorsal root ganglion
is_a: UBERON:0000961 ! thoracic ganglion
intersection_of: UBERON:0000044 ! dorsal root ganglion
intersection_of: part_of UBERON:0000915 ! thorax

[Term]
id: UBERON:0002836
name: lumbar dorsal root ganglion
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2601-FMA_6007
synonym: "lumbar dorsal root ganglion" EXACT [FMA:6007]
xref: FMA:6007 ! Lumbar spinal ganglion
xref: NIF_GrossAnatomy:birnlex_2601 ! Lumbar dorsal root ganglion
is_a: UBERON:0000044 ! dorsal root ganglion

[Term]
id: UBERON:0002837
name: sacral dorsal root ganglion
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2602-FMA_6008
synonym: "sacral dorsal root ganglion" EXACT [FMA:6008]
xref: FMA:6008 ! Sacral spinal ganglion
xref: NIF_GrossAnatomy:birnlex_2602 ! Sacral dorsal root ganglion
is_a: UBERON:0000044 ! dorsal root ganglion

[Term]
id: UBERON:0002838
name: first cervical dorsal root ganglion
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2603-FMA_6010
synonym: "first cervical dorsal root ganglion" EXACT [FMA:6010]
xref: FMA:6010 ! First cervical spinal ganglion
xref: NIF_GrossAnatomy:birnlex_2603 ! First cervical dorsal root ganglion
is_a: UBERON:0002834 ! cervical dorsal root ganglion

[Term]
id: UBERON:0002839
name: second cervical dorsal root ganglion
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2604-FMA_6315
synonym: "second cervical dorsal root ganglion" EXACT [FMA:6315]
xref: FMA:6315 ! Second cervical spinal ganglion
xref: NIF_GrossAnatomy:birnlex_2604 ! Second cervical dorsal root ganglion
is_a: UBERON:0002834 ! cervical dorsal root ganglion

[Term]
id: UBERON:0002840
name: third cervical dorsal root ganglion
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2605-FMA_6316
synonym: "third cervical dorsal root ganglion" EXACT [FMA:6316]
xref: FMA:6316 ! Third cervical spinal ganglion
xref: NIF_GrossAnatomy:birnlex_2605 ! Third cervical dorsal root ganglion
is_a: UBERON:0002834 ! cervical dorsal root ganglion

[Term]
id: UBERON:0002841
name: fourth cervical dorsal root ganglion
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2606-FMA_6317
synonym: "fourth cervical dorsal root ganglion" EXACT [FMA:6317]
xref: FMA:6317 ! Fourth cervical spinal ganglion
xref: NIF_GrossAnatomy:birnlex_2606 ! Fourth cervical dorsal root ganglion
is_a: UBERON:0002834 ! cervical dorsal root ganglion

[Term]
id: UBERON:0002842
name: fifth cervical dorsal root ganglion
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2607-FMA_6318
synonym: "fifth cervical dorsal root ganglion" EXACT [FMA:6318]
xref: FMA:6318 ! Fifth cervical spinal ganglion
xref: NIF_GrossAnatomy:birnlex_2607 ! Fifth cervical dorsal root ganglion
is_a: UBERON:0002834 ! cervical dorsal root ganglion

[Term]
id: UBERON:0002843
name: seventh cervical dorsal root ganglion
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2609-FMA_6360
synonym: "seventh cervical dorsal root ganglion" EXACT [FMA:6360]
xref: FMA:6360 ! Seventh cervical spinal ganglion
xref: NIF_GrossAnatomy:birnlex_2609 ! Seventh cervical dorsal root ganglion
is_a: UBERON:0002834 ! cervical dorsal root ganglion

[Term]
id: UBERON:0002844
name: eighth cervical dorsal root ganglion
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2610-FMA_6361
synonym: "eighth cervical dorsal root ganglion" EXACT [FMA:6361]
xref: FMA:6361 ! Eighth cervical spinal ganglion
xref: NIF_GrossAnatomy:birnlex_2610 ! Eighth cervical dorsal root ganglion
is_a: UBERON:0002834 ! cervical dorsal root ganglion

[Term]
id: UBERON:0002845
name: first thoracic dorsal root ganglion
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2611-FMA_6321
synonym: "first thoracic dorsal root ganglion" EXACT [FMA:6321]
xref: FMA:6321 ! First thoracic spinal ganglion
xref: NIF_GrossAnatomy:birnlex_2611 ! First thoracic dorsal root ganglion
is_a: UBERON:0002835 ! thoracic dorsal root ganglion

[Term]
id: UBERON:0002846
name: second thoracic dorsal root ganglion
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2612-FMA_6322
synonym: "second thoracic dorsal root ganglion" EXACT [FMA:6322]
xref: FMA:6322 ! Second thoracic spinal ganglion
xref: NIF_GrossAnatomy:birnlex_2612 ! Second thoracic dorsal root ganglion
is_a: UBERON:0002835 ! thoracic dorsal root ganglion

[Term]
id: UBERON:0002847
name: third thoracic dorsal root ganglion
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2613-FMA_6323
synonym: "third thoracic dorsal root ganglion" EXACT [FMA:6323]
xref: FMA:6323 ! Third thoracic spinal ganglion
xref: NIF_GrossAnatomy:birnlex_2613 ! Third thoracic dorsal root ganglion
is_a: UBERON:0002835 ! thoracic dorsal root ganglion

[Term]
id: UBERON:0002848
name: fifth thoracic dorsal root ganglion
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2615-FMA_6325
synonym: "fifth thoracic dorsal root ganglion" EXACT [FMA:6325]
xref: FMA:6325 ! Fifth thoracic spinal ganglion
xref: NIF_GrossAnatomy:birnlex_2615 ! Fifth thoracic dorsal root ganglion
is_a: UBERON:0002835 ! thoracic dorsal root ganglion

[Term]
id: UBERON:0002849
name: sixth thoracic dorsal root ganglion
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2616-FMA_6326
synonym: "sixth thoracic dorsal root ganglion" EXACT [FMA:6326]
xref: FMA:6326 ! Sixth thoracic spinal ganglion
xref: NIF_GrossAnatomy:birnlex_2616 ! Sixth thoracic dorsal root ganglion
is_a: UBERON:0002835 ! thoracic dorsal root ganglion

[Term]
id: UBERON:0002850
name: seventh thoracic dorsal root ganglion
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2617-FMA_6327
synonym: "seventh thoracic dorsal root ganglion" EXACT [FMA:6327]
xref: FMA:6327 ! Seventh thoracic spinal ganglion
xref: NIF_GrossAnatomy:birnlex_2617 ! Seventh thoracic dorsal root ganglion
is_a: UBERON:0002835 ! thoracic dorsal root ganglion

[Term]
id: UBERON:0002851
name: eighth thoracic dorsal root ganglion
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2618-FMA_6328
synonym: "eighth thoracic dorsal root ganglion" EXACT [FMA:6328]
xref: FMA:6328 ! Eighth thoracic spinal ganglion
xref: NIF_GrossAnatomy:birnlex_2618 ! Eighth thoracic dorsal root ganglion
is_a: UBERON:0002835 ! thoracic dorsal root ganglion

[Term]
id: UBERON:0002852
name: ninth thoracic dorsal root ganglion
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2619-FMA_6329
synonym: "ninth thoracic dorsal root ganglion" EXACT [FMA:6329]
xref: FMA:6329 ! Ninth thoracic spinal ganglion
xref: NIF_GrossAnatomy:birnlex_2619 ! Ninth thoracic dorsal root ganglion
is_a: UBERON:0002835 ! thoracic dorsal root ganglion

[Term]
id: UBERON:0002853
name: tenth thoracic dorsal root ganglion
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2620-FMA_6330
synonym: "tenth thoracic dorsal root ganglion" EXACT [FMA:6330]
xref: FMA:6330 ! Tenth thoracic spinal ganglion
xref: NIF_GrossAnatomy:birnlex_2620 ! Tenth thoracic dorsal root ganglion
is_a: UBERON:0002835 ! thoracic dorsal root ganglion

[Term]
id: UBERON:0002854
name: eleventh thoracic dorsal root ganglion
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2621-FMA_6331
synonym: "eleventh thoracic dorsal root ganglion" EXACT [FMA:6331]
xref: FMA:6331 ! Eleventh thoracic spinal ganglion
xref: NIF_GrossAnatomy:birnlex_2621 ! Eleventh thoracic dorsal root ganglion
is_a: UBERON:0002835 ! thoracic dorsal root ganglion

[Term]
id: UBERON:0002855
name: twelfth thoracic dorsal root ganglion
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2622-FMA_6332
synonym: "twelfth thoracic dorsal root ganglion" EXACT [FMA:6332]
xref: FMA:6332 ! Twelfth thoracic spinal ganglion
xref: NIF_GrossAnatomy:birnlex_2622 ! Twelfth thoracic dorsal root ganglion
is_a: UBERON:0002835 ! thoracic dorsal root ganglion

[Term]
id: UBERON:0002856
name: second lumbar dorsal root ganglion
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2623-FMA_6336
synonym: "second lumbar dorsal root ganglion" EXACT [FMA:6336]
xref: FMA:6336 ! Second lumbar spinal ganglion
xref: NIF_GrossAnatomy:birnlex_2623 ! Second lumbar dorsal root ganglion
is_a: UBERON:0002836 ! lumbar dorsal root ganglion

[Term]
id: UBERON:0002857
name: first lumbar dorsal root ganglion
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2624-FMA_6335
synonym: "first lumbar dorsal root ganglion" EXACT [FMA:6335]
xref: FMA:6335 ! First lumbar spinal ganglion
xref: NIF_GrossAnatomy:birnlex_2624 ! First lumbar dorsal root ganglion
is_a: UBERON:0002836 ! lumbar dorsal root ganglion

[Term]
id: UBERON:0002858
name: third lumbar dorsal root ganglion
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2625-FMA_6337
synonym: "third lumbar dorsal root ganglion" EXACT [FMA:6337]
xref: FMA:6337 ! Third lumbar spinal ganglion
xref: NIF_GrossAnatomy:birnlex_2625 ! Third lumbar dorsal root ganglion
is_a: UBERON:0002836 ! lumbar dorsal root ganglion

[Term]
id: UBERON:0002859
name: fifth lumbar dorsal root ganglion
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2627-FMA_6339
synonym: "fifth lumbar dorsal root ganglion" EXACT [FMA:6339]
xref: FMA:6339 ! Fifth lumbar spinal ganglion
xref: NIF_GrossAnatomy:birnlex_2627 ! Fifth lumbar dorsal root ganglion
is_a: UBERON:0002836 ! lumbar dorsal root ganglion

[Term]
id: UBERON:0002860
name: first sacral dorsal root ganglion
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2628-FMA_6342
synonym: "first sacral dorsal root ganglion" EXACT [FMA:6342]
xref: FMA:6342 ! First sacral spinal ganglion
xref: NIF_GrossAnatomy:birnlex_2628 ! First sacral dorsal root ganglion
is_a: UBERON:0002837 ! sacral dorsal root ganglion

[Term]
id: UBERON:0002861
name: second sacral dorsal root ganglion
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2629-FMA_6343
synonym: "second sacral dorsal root ganglion" EXACT [FMA:6343]
xref: FMA:6343 ! Second sacral spinal ganglion
xref: NIF_GrossAnatomy:birnlex_2629 ! Second sacral dorsal root ganglion
is_a: UBERON:0002837 ! sacral dorsal root ganglion

[Term]
id: UBERON:0002862
name: third sacral dorsal root ganglion
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2630-FMA_6344
synonym: "third sacral dorsal root ganglion" EXACT [FMA:6344]
xref: FMA:6344 ! Third sacral spinal ganglion
xref: NIF_GrossAnatomy:birnlex_2630 ! Third sacral dorsal root ganglion
is_a: UBERON:0002837 ! sacral dorsal root ganglion

[Term]
id: UBERON:0002863
name: fifth sacral dorsal root ganglion
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2632-FMA_6346
synonym: "fifth sacral dorsal root ganglion" EXACT [FMA:6346]
xref: FMA:6346 ! Fifth sacral spinal ganglion
xref: NIF_GrossAnatomy:birnlex_2632 ! Fifth sacral dorsal root ganglion
is_a: UBERON:0002837 ! sacral dorsal root ganglion

[Term]
id: UBERON:0002864
name: accessory cuneate nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2634-FMA_72603
def: "." [Wikipedia:Accessory_cuneate_nucleus]
subset: uberon_slim
synonym: "external cuneate nucleus" EXACT [FMA:72603]
synonym: "lateral cuneate nucleus" EXACT [FMA:72603]
synonym: "nucleus of corpus restiforme" EXACT [FMA:72603]
xref: FMA:72603 ! Accessory cuneate nucleus
xref: NIF_GrossAnatomy:birnlex_2634 ! Accessory cuneate nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0002865
name: arcuate nucleus of medulla
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2635-FMA_72609
synonym: "arcuate nucleus-1" EXACT [FMA:72609]
synonym: "medial arcuate nucleus" EXACT [FMA:72609]
xref: FMA:72609 ! Arcuate nucleus of medulla
xref: NIF_GrossAnatomy:birnlex_2635 ! Arcuate nucleus of medulla
is_a: UBERON:0002020 ! gray matter of neuraxis
intersection_of: UBERON:0001932 ! arcuate nucleus of hypothalamus
intersection_of: part_of UBERON:0000958 ! medulla

[Term]
id: UBERON:0002866
name: caudal part of spinal trigeminal nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2637-FMA_72606
synonym: "caudal nucleus (Kandell)" EXACT [FMA:72606]
synonym: "caudal nucleus (kandell)" EXACT []
synonym: "spinal trigeminal nucleus, caudal part" EXACT [FMA:72606]
xref: FMA:72606 ! Caudal part of spinal trigeminal nucleus
xref: NIF_GrossAnatomy:birnlex_2637 ! Caudal part of spinal trigeminal nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis
relationship: part_of UBERON:0001717 ! spinal nucleus of trigeminal nerve

[Term]
id: UBERON:0002867
name: central gray substance of medulla
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2638-FMA_72595
synonym: "medullary central gray substance" EXACT [FMA:72595]
xref: FMA:72595 ! Central gray substance of medulla
xref: NIF_GrossAnatomy:birnlex_2638 ! Central gray substance of medulla
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0002868
name: commissural nucleus of vagus nerve
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2639-FMA_54597
synonym: "commissural nucleus-1" EXACT [FMA:54597]
synonym: "nucleus of inferior commissure" EXACT [FMA:54597]
xref: FMA:54597 ! Commissural nucleus of vagus nerve
xref: NIF_GrossAnatomy:birnlex_2639 ! Commissural nucleus of vagus nerve
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0002869
name: diffuse reticular nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2641-FMA_72598
synonym: "nucleus of Kolliker-Fuse" EXACT [FMA:72598]
synonym: "nucleus of kolliker-fuse" EXACT []
xref: FMA:72598 ! Diffuse reticular nucleus
xref: NIF_GrossAnatomy:birnlex_2641 ! Diffuse reticular nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0002870
name: dorsal motor nucleus of vagus nerve
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2642-FMA_54592
def: "." [Wikipedia:Dorsal_motor_nucleus_of_vagus_nerve]
subset: uberon_slim
synonym: "dorsal efferent nucleus of vagus" EXACT [FMA:54592]
xref: FMA:54592 ! Dorsal motor nucleus of vagus nerve
xref: NIF_GrossAnatomy:birnlex_2642 ! Dorsal motor nucleus of vagus nerve
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0002871
name: hypoglossal nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2644-FMA_54505
def: "." [Wikipedia:Hypoglossal_nucleus]
subset: uberon_slim
synonym: "hypoglossal nucleus" EXACT [FMA:54505]
synonym: "nucleus of hypoglossal nerve" EXACT [FMA:54505]
synonym: "twelfth cranial nerve nucleus" EXACT [FMA:54505]
xref: FMA:54505 ! Hypoglossal nerve nucleus
xref: NIF_GrossAnatomy:birnlex_2644 ! Hypoglossal nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0002872
name: inferior salivatory nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2645-FMA_72601
def: "." [Wikipedia:Inferior_salivatory_nucleus]
subset: uberon_slim
synonym: "inferior salivary nucleus" EXACT []
xref: FMA:72601 ! Inferior salivatory nucleus
xref: NIF_GrossAnatomy:birnlex_2645 ! Inferior salivatory nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0001649 ! glossopharyngeal nerve

[Term]
id: UBERON:0002873
name: interpolar part of spinal trigeminal nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2646-FMA_235324
xref: FMA:235324 ! Interpolar part of spinal trigeminal nucleus
xref: NIF_GrossAnatomy:birnlex_2646 ! Interpolar part of spinal trigeminal nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis
relationship: part_of UBERON:0001717 ! spinal nucleus of trigeminal nerve

[Term]
id: UBERON:0002874
name: lateral pericuneate nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2647-FMA_72604
xref: FMA:72604 ! Lateral pericuneate nucleus
xref: NIF_GrossAnatomy:birnlex_2647 ! Lateral pericuneate nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0002875
name: medial pericuneate nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2648-FMA_72605
xref: FMA:72605 ! Medial pericuneate nucleus
xref: NIF_GrossAnatomy:birnlex_2648 ! Medial pericuneate nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0002876
name: nucleus intercalatus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2651-FMA_72597
synonym: "intercalated nucleus of medulla" EXACT [FMA:72597]
synonym: "nucleus intercalatus of medulla" EXACT [FMA:72597]
synonym: "nucleus of Staderini" EXACT [FMA:72597]
synonym: "nucleus of staderini" EXACT []
xref: FMA:72597 ! Nucleus intercalatus
xref: NIF_GrossAnatomy:birnlex_2651 ! Nucleus intercalatus
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0002877
name: parasolitary nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2653-FMA_77091
xref: FMA:77091 ! Parasolitary nucleus
xref: NIF_GrossAnatomy:birnlex_2653 ! Parasolitary nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0002878
name: nucleus intercalatus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2654-FMA_72597
synonym: "intercalated nucleus of medulla" EXACT [FMA:72597]
synonym: "nucleus intercalatus of medulla" EXACT [FMA:72597]
synonym: "nucleus of Staderini" EXACT [FMA:72597]
synonym: "nucleus of staderini" EXACT []
xref: FMA:72597 ! Nucleus intercalatus
xref: NIF_GrossAnatomy:birnlex_2654 ! Nucleus intercalatus
is_a: UBERON:0002308 ! nucleus of brain
intersection_of: UBERON:0002308 ! nucleus of brain
intersection_of: part_of UBERON:0000958 ! medulla

[Term]
id: UBERON:0002879
name: peritrigeminal nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2655-FMA_72600
xref: FMA:72600 ! Peritrigeminal nucleus
xref: NIF_GrossAnatomy:birnlex_2655 ! Peritrigeminal nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0002880
name: pontobulbar nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2656-FMA_72608
synonym: "nucleus of circumolivary bundle" EXACT [FMA:72608]
synonym: "pontobulbar body" EXACT [FMA:72608]
xref: FMA:72608 ! Pontobulbar nucleus
xref: NIF_GrossAnatomy:birnlex_2656 ! Pontobulbar nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0002881
name: sublingual nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2657-FMA_68574
def: "." [Wikipedia:Sublingual_nucleus]
subset: uberon_slim
synonym: "nucleus of Roller" EXACT [FMA:68574]
synonym: "nucleus of roller" EXACT []
xref: FMA:68574 ! Sublingual nucleus
xref: NIF_GrossAnatomy:birnlex_2657 ! Sublingual nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0002882
name: supraspinal nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2658-FMA_74507
xref: FMA:74507 ! Supraspinal nucleus
xref: NIF_GrossAnatomy:birnlex_2658 ! Supraspinal nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0002883
name: central amygdaloid nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2682-FMA_74047
synonym: "central nucleus of amygdala" EXACT [FMA:74047]
xref: FMA:74047 ! Central amygdaloid nucleus
xref: NIF_GrossAnatomy:birnlex_2682 ! Central amygdaloid nucleus
is_a: UBERON:0002308 ! nucleus of brain
xref: BTO:0002686 ! central amygdaloid nucleus

[Term]
id: UBERON:0002884
name: intercalated amygdaloid nuclei
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2683-FMA_61868
synonym: "intercalated amygdaloid nuclei" EXACT [FMA:61868]
synonym: "intercalated masses of nucleus amygdaloideus" EXACT [FMA:61868]
synonym: "intercalated nuclei of amygdala" EXACT [FMA:61868]
xref: FMA:61868 ! Intercalated amygdaloid nucleus
xref: NIF_GrossAnatomy:birnlex_2683 ! Intercalated amygdaloid nuclei
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0001876 ! amygdala

[Term]
id: UBERON:0002885
name: accessory basal amygdaloid nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2686-FMA_61867
xref: FMA:61867 ! Accessory basal amygdaloid nucleus
xref: NIF_GrossAnatomy:birnlex_2686 ! Accessory basal amygdaloid nucleus
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0001876 ! amygdala

[Term]
id: UBERON:0002886
name: lateral amygdaloid nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2687-FMA_61866
synonym: "lateral nucleus of amygdala" EXACT [FMA:61866]
synonym: "lateral principal nucleus of amygdala" EXACT [FMA:61866]
xref: FMA:61866 ! Lateral amygdaloid nucleus
xref: NIF_GrossAnatomy:birnlex_2687 ! Lateral amygdaloid nucleus
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0001876 ! amygdala
xref: BTO:0002704 ! lateral amygdaloid nucleus

[Term]
id: UBERON:0002887
name: basal amygdaloid nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2692-FMA_68855
synonym: "basolateral amygdaloid nucleus" EXACT [FMA:68855]
synonym: "basolateral nucleus (De Olmos)" EXACT [FMA:68855]
synonym: "basolateral nucleus (de olmos)" EXACT []
synonym: "intermediate principal nucleus" EXACT [FMA:68855]
xref: FMA:68855 ! Basal amygdaloid nucleus
xref: NIF_GrossAnatomy:birnlex_2692 ! Basal amygdaloid nucleus
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0001876 ! amygdala

[Term]
id: UBERON:0002888
name: lateral part of basal amygdaloid nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2695-FMA_68857
synonym: "lateral basal nucleus of the amygdala" EXACT [FMA:68857]
synonym: "lateral division of the basal nucleus" EXACT [FMA:68857]
xref: FMA:68857 ! Lateral part of basal amygdaloid nucleus
xref: NIF_GrossAnatomy:birnlex_2695 ! Lateral part of basal amygdaloid nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis

[Term]
id: UBERON:0002889
name: medial part of basal amygdaloid nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2696-FMA_68858
synonym: "basomedial amygdaloid nucleus" EXACT [FMA:68858]
synonym: "medial basal nucleus of amygdala" EXACT [FMA:68858]
synonym: "medial division of basal nucleus" EXACT [FMA:68858]
xref: FMA:68858 ! Medial part of basal amygdaloid nucleus
xref: NIF_GrossAnatomy:birnlex_2696 ! Medial part of basal amygdaloid nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis

[Term]
id: UBERON:0002890
name: anterior amygdaloid area
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2698-FMA_61861
xref: FMA:61861 ! Anterior amygdaloid area
xref: NIF_GrossAnatomy:birnlex_2698 ! Anterior amygdaloid area
is_a: UBERON:0002020 ! gray matter of neuraxis
relationship: part_of UBERON:0001876 ! amygdala

[Term]
id: UBERON:0002891
name: cortical amygdaloid nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2700-FMA_61862
synonym: "posterior cortical nucleus of amygdala" EXACT [FMA:61862]
xref: FMA:61862 ! Cortical amygdaloid nucleus
xref: NIF_GrossAnatomy:birnlex_2700 ! Cortical amygdaloid nucleus
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0001876 ! amygdala
xref: BTO:0002703 ! cortical amygdaloid nucleus

[Term]
id: UBERON:0002892
name: medial amygdaloid nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2701-FMA_74046
synonym: "medial nucleus of amygdala" EXACT [FMA:74046]
xref: FMA:74046 ! Medial amygdaloid nucleus
xref: NIF_GrossAnatomy:birnlex_2701 ! Medial amygdaloid nucleus
is_a: UBERON:0002308 ! nucleus of brain
xref: BTO:0002702 ! medial amygdaloid nucleus

[Term]
id: UBERON:0002893
name: nucleus of lateral olfactory tract
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2702-FMA_61865
synonym: "lateral olfactory tract nucleus" EXACT [FMA:61865]
xref: FMA:61865 ! Nucleus of lateral olfactory tract
xref: NIF_GrossAnatomy:birnlex_2702 ! Nucleus of lateral olfactory tract
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0001876 ! amygdala

[Term]
id: UBERON:0002894
name: olfactory cortex
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2707-MA_0000193
def: "The olfactory cortex is involved in the perception of smell. It receives input from the olfactory bulb and is responsible for the identification of odors[GO]." [Wikipedia:Olfactory_cortex]
subset: uberon_slim
synonym: "olfactory lobe" RELATED [MA:0000193]
xref: EHDAA:5482 ! olfactory cortex
xref: HOG:0000325 ! olfactory cortex
xref: MA:0000193 ! olfactory cortex
xref: NIF_GrossAnatomy:birnlex_2707 ! Olfactory cortex
is_a: UBERON:0002616 ! regional part of brain
xref: BTO:0001446 ! olfactory cortex

[Term]
id: UBERON:0002895
name: secondary olfactory cortex
alt_id: UBERON:NIF_GrossAnatomy_birnlex_2709-FMA_72356
def: "." [Wikipedia:Entorhinal_cortex]
subset: uberon_slim
synonym: "area 28 of Brodmann (Crosby)" EXACT [FMA:72356]
synonym: "area 28 of brodmann (crosby)" EXACT []
synonym: "entorhinal cortex" EXACT [FMA:72356]
synonym: "secondary olfactory cortex" EXACT [FMA:72356]
synonym: "secondary olfactory cortical area (Carpenter)" EXACT [FMA:72356]
synonym: "secondary olfactory cortical area (carpenter)" EXACT []
xref: FMA:72356 ! Entorhinal area
xref: NIF_GrossAnatomy:birnlex_2709 ! Secondary olfactory cortex
is_a: UBERON:0000064 ! organ part

[Term]
id: UBERON:0002896
name: telodiencephalic fissure
alt_id: UBERON:NIF_GrossAnatomy_birnlex_4001-FMA_83726
synonym: "telo-diencephalic fissure" EXACT [FMA:83726]
xref: FMA:83726 ! Telodiencephalic fissure
xref: NIF_GrossAnatomy:birnlex_4001 ! Telodiencephalic fissure
is_a: UBERON:0000464 ! anatomical space

[Term]
id: UBERON:0002897
name: cistern of lamina terminalis
alt_id: UBERON:NIF_GrossAnatomy_birnlex_4002-FMA_74516
synonym: "lamina terminalis cistern" EXACT [FMA:74516]
xref: FMA:74516 ! Cistern of lamina terminalis
xref: NIF_GrossAnatomy:birnlex_4002 ! Cistern of lamina terminalis
is_a: UBERON:0000464 ! anatomical space
xref: ncithesaurus:Lamina_Terminalis_Cistern ! Lamina Terminalis Cistern

[Term]
id: UBERON:0002898
name: chiasmatic cistern
alt_id: UBERON:NIF_GrossAnatomy_birnlex_4003-FMA_74515
def: "." [Wikipedia:Chiasmatic_cistern]
subset: uberon_slim
xref: FMA:74515 ! Chiasmatic cistern
xref: NIF_GrossAnatomy:birnlex_4003 ! Chiasmatic cistern
is_a: UBERON:0000464 ! anatomical space
xref: ncithesaurus:Chiasmatic_Cistern ! Chiasmatic Cistern

[Term]
id: UBERON:0002899
name: hippocampal sulcus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_4004-FMA_83747
def: "." [Wikipedia:Hippocampal_sulcus]
subset: uberon_slim
synonym: "dentate fissure" EXACT [FMA:83747]
synonym: "hippocampal fissure" EXACT [FMA:83747]
xref: FMA:83747 ! Hippocampal sulcus
xref: NIF_GrossAnatomy:birnlex_4004 ! Hippocampal sulcus
is_a: UBERON:0000093 ! sulcus
xref: ncithesaurus:Hippocampal_Fissure ! Hippocampal Fissure

[Term]
id: UBERON:0002900
name: transverse occipital sulcus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_4013-FMA_83786
xref: FMA:83786 ! Transverse occipital sulcus
xref: NIF_GrossAnatomy:birnlex_4013 ! Transverse occipital sulcus
is_a: UBERON:0000093 ! sulcus
xref: BTO:0003786 ! transverse occipital sulcus

[Term]
id: UBERON:0002901
name: posterior calcarine sulcus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_4015-FMA_83787
synonym: "postcalcarine sulcus" EXACT [FMA:83787]
synonym: "posterior calcarine fissure" EXACT [FMA:83787]
synonym: "posterior part of calcarine sulcus" EXACT [FMA:83787]
xref: FMA:83787 ! Posterior calcarine sulcus
xref: NIF_GrossAnatomy:birnlex_4015 ! Posterior calcarine sulcus
is_a: UBERON:0000093 ! sulcus

[Term]
id: UBERON:0002902
name: occipital pole
alt_id: UBERON:NIF_GrossAnatomy_birnlex_4016-FMA_74892
def: "." [Wikipedia:Occipital_pole]
subset: uberon_slim
xref: FMA:74892 ! Occipital pole
xref: NIF_GrossAnatomy:birnlex_4016 ! Occipital pole
is_a: UBERON:0000477 ! anatomical cluster
xref: BTO:0001868 ! occipital pole

[Term]
id: UBERON:0002903
name: lunate sulcus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_4017-FMA_83788
synonym: "lunate fissure" EXACT [FMA:83788]
xref: FMA:83788 ! Lunate sulcus
xref: NIF_GrossAnatomy:birnlex_4017 ! Lunate sulcus
is_a: UBERON:0000093 ! sulcus
xref: ncithesaurus:Lunate_Sulcus ! Lunate Sulcus

[Term]
id: UBERON:0002904
name: lateral occipital sulcus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_4018-FMA_83785
def: "." [Wikipedia:Lateral_occipital_sulcus]
subset: uberon_slim
xref: FMA:83785 ! Lateral occipital sulcus
xref: NIF_GrossAnatomy:birnlex_4018 ! Lateral occipital sulcus
is_a: UBERON:0000093 ! sulcus
xref: ncithesaurus:Lateral-occipital_Sulcus ! Lateral-Occipital Sulcus

[Term]
id: UBERON:0002905
name: intralingual sulcus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_4019-FMA_83789
xref: FMA:83789 ! Intralingual sulcus
xref: NIF_GrossAnatomy:birnlex_4019 ! Intralingual sulcus
is_a: UBERON:0000093 ! sulcus

[Term]
id: UBERON:0002906
name: anterior occipital sulcus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_4023-FMA_75758
xref: FMA:75758 ! Anterior occipital sulcus
xref: NIF_GrossAnatomy:birnlex_4023 ! Anterior occipital sulcus
is_a: UBERON:0000093 ! sulcus

[Term]
id: UBERON:0002907
name: superior postcentral sulcus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_4025-FMA_83775
synonym: "postcentral dimple" EXACT [FMA:83775]
xref: FMA:83775 ! Superior postcentral sulcus
xref: NIF_GrossAnatomy:birnlex_4025 ! Superior postcentral sulcus
is_a: UBERON:0000093 ! sulcus

[Term]
id: UBERON:0002908
name: subparietal sulcus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_4026-FMA_83777
synonym: "splenial sulcus" EXACT [FMA:83777]
synonym: "suprasplenial sulcus" EXACT [FMA:83777]
xref: FMA:83777 ! Subparietal sulcus
xref: NIF_GrossAnatomy:birnlex_4026 ! Subparietal sulcus
is_a: UBERON:0000093 ! sulcus

[Term]
id: UBERON:0002909
name: posterior subcentral sulcus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_4027-FMA_83778
xref: FMA:83778 ! Posterior subcentral sulcus
xref: NIF_GrossAnatomy:birnlex_4027 ! Posterior subcentral sulcus
is_a: UBERON:0000093 ! sulcus

[Term]
id: UBERON:0002910
name: posterior ascending limb of lateral sulcus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_4028-FMA_83761
synonym: "ascending terminal ramus of Sylvian fissure" EXACT [FMA:83761]
synonym: "ascending terminal ramus of sylvian fissure" EXACT []
synonym: "posterior ascending limb of lateral fissure" EXACT [FMA:83761]
synonym: "posterior ramus of lateral cerebral sulcus" EXACT [FMA:83761]
xref: FMA:83761 ! Posterior ascending limb of lateral sulcus
xref: NIF_GrossAnatomy:birnlex_4028 ! Posterior ascending limb of lateral sulcus
is_a: UBERON:0000464 ! anatomical space

[Term]
id: UBERON:0002911
name: parietal operculum
alt_id: UBERON:NIF_GrossAnatomy_birnlex_4029-FMA_74889
def: "." [Wikipedia:Parietal_operculum]
subset: uberon_slim
xref: FMA:74889 ! Parietal operculum
xref: NIF_GrossAnatomy:birnlex_4029 ! Parietal operculum
is_a: UBERON:0000477 ! anatomical cluster

[Term]
id: UBERON:0002912
name: marginal sulcus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_4030-FMA_83773
def: "." [Wikipedia:Marginal_sulcus]
subset: uberon_slim
synonym: "marginal branch of cingulate sulcus" EXACT [FMA:83773]
synonym: "marginal ramus of cingulate sulcus" EXACT [FMA:83773]
xref: FMA:83773 ! Marginal sulcus
xref: NIF_GrossAnatomy:birnlex_4030 ! Marginal sulcus
is_a: UBERON:0000093 ! sulcus

[Term]
id: UBERON:0002913
name: intraparietal sulcus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_4031-FMA_83772
def: "." [Wikipedia:Intraparietal_sulcus]
subset: uberon_slim
synonym: "interparietal fissure" EXACT [FMA:83772]
synonym: "intraparietal fissure" EXACT [FMA:83772]
xref: FMA:83772 ! Intraparietal sulcus
xref: NIF_GrossAnatomy:birnlex_4031 ! Intraparietal sulcus
is_a: UBERON:0000093 ! sulcus
xref: ncithesaurus:Intraparietal_Sulcus ! Intraparietal Sulcus
xref: BTO:0003787 ! intraparietal sulcus

[Term]
id: UBERON:0002914
name: inferior postcentral sulcus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_4032-FMA_83776
xref: FMA:83776 ! Inferior postcentral sulcus
xref: NIF_GrossAnatomy:birnlex_4032 ! Inferior postcentral sulcus
is_a: UBERON:0000093 ! sulcus

[Term]
id: UBERON:0002915
name: postcentral sulcus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_4033-FMA_83774
def: "." [Wikipedia:Postcentral_sulcus]
subset: uberon_slim
synonym: "postcentral fissure of cerebral hemisphere" EXACT [FMA:83774]
synonym: "postcentral fissure-1" EXACT [FMA:83774]
xref: FMA:83774 ! Postcentral sulcus
xref: NIF_GrossAnatomy:birnlex_4033 ! Postcentral sulcus
is_a: UBERON:0000093 ! sulcus
xref: ncithesaurus:Postcentral_Sulcus ! Postcentral Sulcus

[Term]
id: UBERON:0002916
name: central sulcus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_4035-FMA_83752
def: "." [Wikipedia:Central_sulcus]
subset: uberon_slim
synonym: "central cerebral sulcus" EXACT [FMA:83752]
synonym: "central fissure" EXACT [FMA:83752]
synonym: "central sulcus of Rolando" EXACT [FMA:83752]
synonym: "central sulcus of rolando" EXACT []
synonym: "fissure of Rolando" EXACT [FMA:83752]
synonym: "fissure of rolando" EXACT []
synonym: "sulcus of Rolando" EXACT [FMA:83752]
synonym: "sulcus of rolando" EXACT []
xref: FMA:83752 ! Central sulcus
xref: NIF_GrossAnatomy:birnlex_4035 ! Central sulcus
is_a: UBERON:0000093 ! sulcus
xref: ncithesaurus:Central_Sulcus_of_Rolando ! Central Sulcus of Rolando

[Term]
id: UBERON:0002917
name: regional part of inferior colliculus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_4036-FMA_77871
synonym: "inferior colliculus segment" EXACT [FMA:77871]
synonym: "segment of inferior colliculus" EXACT [NIF_GrossAnatomy:birnlex_4036]
xref: FMA:77871 ! Segment of inferior colliculus
xref: NIF_GrossAnatomy:birnlex_4036 ! Regional part of inferior colliculus
is_a: UBERON:0002966 ! regional part of midbrain tectum
intersection_of: UBERON:0002616 ! regional part of brain
intersection_of: part_of UBERON:0001946 ! inferior colliculus

[Term]
id: UBERON:0002918
name: medial parabrachial nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_4038-FMA_72480
def: "." [Wikipedia:Medial_parabrachial_nucleus]
subset: uberon_slim
xref: FMA:72480 ! Medial parabrachial nucleus
xref: NIF_GrossAnatomy:birnlex_4038 ! Medial parabrachial nucleus
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0002919
name: anterior parolfactory sulcus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_4039-FMA_83744
synonym: "paraolfactory sulcus" EXACT [FMA:83744]
xref: FMA:83744 ! Anterior parolfactory sulcus
xref: NIF_GrossAnatomy:birnlex_4039 ! Anterior parolfactory sulcus
is_a: UBERON:0000093 ! sulcus

[Term]
id: UBERON:0002920
name: callosal sulcus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_4040-FMA_83743
def: "." [Wikipedia:Callosal_sulcus]
subset: uberon_slim
synonym: "sulcus of corpus callosum" EXACT [FMA:83743]
xref: FMA:83743 ! Callosal sulcus
xref: NIF_GrossAnatomy:birnlex_4040 ! Callosal sulcus
is_a: UBERON:0000093 ! sulcus

[Term]
id: UBERON:0002921
name: longitudinal fissure
alt_id: UBERON:NIF_GrossAnatomy_birnlex_4041-FMA_83727
def: "." [Wikipedia:Longitudinal_fissure]
subset: uberon_slim
synonym: "hemispheric sulcus" EXACT [FMA:83727]
synonym: "interhemispheric fissure" EXACT [FMA:83727]
synonym: "longitudinal cerebral fissure" EXACT [FMA:83727]
synonym: "longitudinal sulcus" EXACT [FMA:83727]
synonym: "medial longitudinal fissure" EXACT [FMA:83727]
synonym: "sagittal fissure" EXACT [FMA:83727]
xref: FMA:83727 ! Longitudinal fissure
xref: NIF_GrossAnatomy:birnlex_4041 ! Longitudinal fissure
is_a: UBERON:0000464 ! anatomical space
xref: ncithesaurus:Longitudinal_Fissure ! Longitudinal Fissure

[Term]
id: UBERON:0002922
name: olfactory trigone
alt_id: UBERON:NIF_GrossAnatomy_birnlex_4042-FMA_74883
def: "." [Wikipedia:Olfactory_trigone]
subset: uberon_slim
xref: FMA:74883 ! Olfactory trigone
xref: NIF_GrossAnatomy:birnlex_4042 ! Olfactory trigone
is_a: UBERON:0000477 ! anatomical cluster

[Term]
id: UBERON:0002923
name: posterior parolfactory sulcus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_4043-FMA_83745
xref: FMA:83745 ! Posterior parolfactory sulcus
xref: NIF_GrossAnatomy:birnlex_4043 ! Posterior parolfactory sulcus
is_a: UBERON:0000093 ! sulcus

[Term]
id: UBERON:0002924
name: terminal nerve
alt_id: UBERON:NIF_GrossAnatomy_birnlex_4044-ZFA_0001356
def: "." [Wikipedia:Terminal_nerve]
subset: uberon_slim
synonym: "nervus terminalis" EXACT [ZFA:0001356]
xref: NIF_GrossAnatomy:birnlex_4044 ! Terminal nerve
xref: ZFA:0001356 ! terminal nerve
is_a: UBERON:0001785 ! cranial nerve

[Term]
id: UBERON:0002925
name: trigeminal nuclear complex
alt_id: UBERON:NIF_GrossAnatomy_birnlex_4096-FMA_71248
def: "." [Wikipedia:Trigeminal_nuclei]
subset: uberon_slim
synonym: "trigeminal nuclei" EXACT [FMA:71248]
xref: FMA:71248 ! Trigeminal nuclear complex
xref: NIF_GrossAnatomy:birnlex_4096 ! Trigeminal nuclear complex
is_a: UBERON:0002020 ! gray matter of neuraxis

[Term]
id: UBERON:0002926
name: gustatory epithelium
alt_id: UBERON:NIF_GrossAnatomy_birnlex_4099-FMA_62412
xref: FMA:62412 ! Gustatory epithelium
xref: NIF_GrossAnatomy:birnlex_4099 ! Gustatory epithelium
is_a: UBERON:0000488 ! atypical epithelium

[Term]
id: UBERON:0002927
name: circumvallate papilla
alt_id: UBERON:NIF_GrossAnatomy_birnlex_4106_2-MA_0001594
def: "." [Wikipedia:Circumvallate_papilla]
subset: uberon_slim
xref: MA:0001594 ! circumvallate papilla
xref: NIF_GrossAnatomy:birnlex_4106_2 ! Circumvallate papilla
is_a: UBERON:0001726 ! papilla of tongue
xref: ncithesaurus:Circumvallate_Papilla ! Circumvallate Papilla

[Term]
id: UBERON:0002928
name: dentate gyrus polymorphic layer
alt_id: UBERON:NIF_GrossAnatomy_birnlex_4128-MA_0002864
xref: MA:0002864 ! dentate gyrus polymorphic layer
xref: NIF_GrossAnatomy:birnlex_4128 ! Dentate gyrus polymorphic layer
is_a: UBERON:0000200 ! gyrus
is_a: UBERON:0002304 ! layer of dentate gyrus

[Term]
id: UBERON:0002929
name: dentate gyrus pyramidal layer
alt_id: UBERON:NIF_GrossAnatomy_birnlex_4129-MA_0000948
xref: MA:0000948 ! dentate gyrus pyramidal layer
xref: NIF_GrossAnatomy:birnlex_4129 ! Dentate gyrus granule cell layer
is_a: UBERON:0000200 ! gyrus
is_a: UBERON:0002304 ! layer of dentate gyrus

[Term]
id: UBERON:0002930
name: tectopontine tract
alt_id: UBERON:NIF_GrossAnatomy_birnlex_701-FMA_72505
synonym: "tectopontine fibers" EXACT [FMA:72505]
synonym: "tectopontine fibres" EXACT [FMA:72505]
xref: FMA:72505 ! Tectopontine tract
xref: NIF_GrossAnatomy:birnlex_701 ! Tectopontine tract
is_a: UBERON:0002316 ! white matter of neuraxis

[Term]
id: UBERON:0002931
name: dorsal septal nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_704-FMA_61877
xref: FMA:61877 ! Dorsal septal nucleus
xref: NIF_GrossAnatomy:birnlex_704 ! Dorsal septal nucleus
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0002932
name: trapezoid body
alt_id: UBERON:NIF_GrossAnatomy_birnlex_707-FMA_72487
def: "." [Wikipedia:Trapezoid_body]
subset: uberon_slim
xref: FMA:72487 ! Trapezoid body
xref: NIF_GrossAnatomy:birnlex_707 ! Trapezoid body
is_a: UBERON:0002316 ! white matter of neuraxis

[Term]
id: UBERON:0002933
name: nucleus of anterior commissure
alt_id: UBERON:NIF_GrossAnatomy_birnlex_712-FMA_61883
synonym: "anterior commissure nucleus" EXACT [FMA:61883]
synonym: "bed nucleus of anterior commissure" EXACT [FMA:61883]
synonym: "nucleus of commissura anterior" EXACT [FMA:61883]
xref: FMA:61883 ! Nucleus of anterior commissure
xref: NIF_GrossAnatomy:birnlex_712 ! Nucleus of anterior commissure
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0002934
name: ventral oculomotor nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_713-FMA_72422
synonym: "ventral oculomotor cell column" EXACT [FMA:72422]
xref: FMA:72422 ! Ventral oculomotor nucleus
xref: NIF_GrossAnatomy:birnlex_713 ! Ventral oculomotor nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0002935
name: magnocellular part of ventral anterior nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_716-FMA_62192
synonym: "magnocellular division of ventral anterior nucleus of thalamus" EXACT [FMA:62192]
synonym: "ventral anterior nucleus, magnocellular part" EXACT [FMA:62192]
synonym: "ventral anterior nucleus, pars magnocellularis" EXACT [FMA:62192]
synonym: "ventral anterior thalamic nucleus, magnocellular part" EXACT [FMA:62192]
xref: FMA:62192 ! Magnocellular part of ventral anterior nucleus
xref: NIF_GrossAnatomy:birnlex_716 ! Magnocellular part of ventral anterior nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis

[Term]
id: UBERON:0002936
name: magnocellular part of red nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_720-FMA_72431
synonym: "paleoruber" EXACT [FMA:72431]
synonym: "red nucleus, magnocellular part" EXACT [FMA:72431]
xref: FMA:72431 ! Magnocellular part of red nucleus
xref: NIF_GrossAnatomy:birnlex_720 ! Magnocellular part of red nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis
relationship: part_of UBERON:0001947 ! red nucleus

[Term]
id: UBERON:0002937
name: parvicellular part of ventral anterior nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_722-FMA_62191
synonym: "ventral anterior nucleus, pars parvicellularis" EXACT [FMA:62191]
synonym: "ventral anterior thalamic nucleus, parvicellular part" EXACT [FMA:62191]
synonym: "ventralis anterior (Jones)" EXACT [FMA:62191]
synonym: "ventralis anterior (jones)" EXACT []
xref: FMA:62191 ! Parvicellular part of ventral anterior nucleus
xref: NIF_GrossAnatomy:birnlex_722 ! Parvicellular part of ventral anterior nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis

[Term]
id: UBERON:0002938
name: parvocellular part of red nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_725-FMA_72430
synonym: "neoruber" EXACT [FMA:72430]
synonym: "red nucleus, parvocellular part" EXACT [FMA:72430]
xref: FMA:72430 ! Parvocellular part of red nucleus
xref: NIF_GrossAnatomy:birnlex_725 ! Parvocellular part of red nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis
relationship: part_of UBERON:0001947 ! red nucleus

[Term]
id: UBERON:0002939
name: ventral posteroinferior nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_728-FMA_62199
synonym: "ventral posterior inferior nucleus" EXACT [FMA:62199]
synonym: "ventral posterior inferior nucleus of thalamus" EXACT [FMA:62199]
synonym: "ventral posterior inferior thalamic nucleus" EXACT [FMA:62199]
xref: FMA:62199 ! Ventral posteroinferior nucleus
xref: NIF_GrossAnatomy:birnlex_728
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0002940
name: anterior column of fornix
alt_id: UBERON:NIF_GrossAnatomy_birnlex_731-FMA_61966
synonym: "anterior crus of fornix" EXACT [FMA:61966]
synonym: "anterior pillar of fornix" EXACT [FMA:61966]
xref: FMA:61966 ! Anterior column of fornix
xref: NIF_GrossAnatomy:birnlex_731 ! Anterior column of fornix
is_a: UBERON:0002316 ! white matter of neuraxis

[Term]
id: UBERON:0002941
name: capsule of red nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_732-FMA_72450
synonym: "red nuclear capsule" EXACT [FMA:72450]
xref: FMA:72450 ! Capsule of red nucleus
xref: NIF_GrossAnatomy:birnlex_732 ! Capsule of red nucleus
is_a: UBERON:0002316 ! white matter of neuraxis
relationship: part_of UBERON:0001947 ! red nucleus

[Term]
id: UBERON:0002942
name: ventral posterolateral nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_737-FMA_62200
def: "." [Wikipedia:Ventral_posterolateral_nucleus]
subset: uberon_slim
synonym: "posterolateral ventral nucleus of thalamus" EXACT [FMA:62200]
synonym: "ventral posterolateral nucleus of thalamus" EXACT [FMA:62200]
synonym: "ventral posterolateral thalamic nucleus" EXACT [FMA:62200]
xref: FMA:62200 ! Ventral posterolateral nucleus
xref: NIF_GrossAnatomy:birnlex_737 ! Ventral posterolateral nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0002943
name: lingual gyrus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_740-FMA_61904
def: "." [Wikipedia:Lingual_gyrus]
subset: uberon_slim
synonym: "lingula of cerebral hemisphere" EXACT [FMA:61904]
synonym: "medial occipitotemporal gyrus" EXACT [FMA:61904]
synonym: "medial occipitotemporal gyrus-2" EXACT [FMA:61904]
xref: FMA:61904 ! Lingual gyrus
xref: NIF_GrossAnatomy:birnlex_740 ! Lingual gyrus
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0002021 ! occipital lobe

[Term]
id: UBERON:0002944
name: spinothalamic tract of medulla
alt_id: UBERON:NIF_GrossAnatomy_birnlex_741-FMA_72644
def: "a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body in the spinal cord towards target cells in the thalamus. This axonal process is a member of those that make up the spinothalamic tract, one of the major routes of nociceptive signaling[GO]." [Wikipedia:Spinothalamic_tract]
subset: uberon_slim
synonym: "spinothalamic tract" EXACT [FMA:72644]
xref: FMA:72644 ! Spinothalamic tract of medulla
xref: NIF_GrossAnatomy:birnlex_741 ! Spinothalamic tract of medulla
is_a: UBERON:0002316 ! white matter of neuraxis
relationship: part_of UBERON:0001896 ! medulla oblongata

[Term]
id: UBERON:0002945
name: ventral posteromedial nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_743-FMA_62202
def: "." [Wikipedia:Ventral_posteromedial_nucleus]
subset: uberon_slim
synonym: "arcuate nucleus of thalamus" EXACT [FMA:62202]
synonym: "arcuate nucleus-3" EXACT [FMA:62202]
synonym: "posteromedial ventral nucleus of thalamus" EXACT [FMA:62202]
synonym: "semilunar nucleus" EXACT [FMA:62202]
synonym: "thalamic gustatory nucleus" EXACT [FMA:62202]
synonym: "ventral posterior medial nucleus" EXACT [FMA:62202]
synonym: "ventral posteromedial nucleus of thalamus" EXACT [FMA:62202]
xref: FMA:62202 ! Ventral posteromedial nucleus
xref: NIF_GrossAnatomy:birnlex_743 ! Ventral posteromedial nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis
intersection_of: UBERON:0001932 ! arcuate nucleus of hypothalamus
intersection_of: part_of UBERON:0001897 ! thalamus

[Term]
id: UBERON:0002946
name: regional part of cerebellum
alt_id: UBERON:NIF_GrossAnatomy_birnlex_748-FMA_256150
synonym: "segment of cerebellum" EXACT [NIF_GrossAnatomy:birnlex_748]
xref: FMA:256150 ! Segment of cerebellum
xref: NIF_GrossAnatomy:birnlex_748 ! Regional part of cerebellum
is_a: UBERON:0002616 ! regional part of brain
is_a: UBERON:0002680 ! regional part of metencephalon
intersection_of: UBERON:0002616 ! regional part of brain
intersection_of: part_of UBERON:0002037 ! cerebellum

[Term]
id: UBERON:0002947
name: frontal operculum
alt_id: UBERON:NIF_GrossAnatomy_birnlex_751-FMA_74886
xref: FMA:74886 ! Frontal operculum
xref: NIF_GrossAnatomy:birnlex_751 ! Frontal operculum
is_a: UBERON:0000477 ! anatomical cluster

[Term]
id: UBERON:0002948
name: superior occipital gyrus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_758-FMA_61901
synonym: "gyrus occipitalis primus" EXACT [FMA:61901]
xref: FMA:61901 ! Superior occipital gyrus
xref: NIF_GrossAnatomy:birnlex_758 ! Superior occipital gyrus
is_a: UBERON:0000200 ! gyrus
relationship: part_of UBERON:0002021 ! occipital lobe

[Term]
id: UBERON:0002949
name: tectospinal tract
alt_id: UBERON:NIF_GrossAnatomy_birnlex_759-FMA_72620
def: "a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body in the superior colliculus of the midbrain towards target cells in the ventral spinal cord[GO]." [Wikipedia:Tectospinal_tract]
subset: uberon_slim
synonym: "held's bundle" EXACT [FMA:72620]
synonym: "tectospinal pathway" EXACT [FMA:72620]
xref: FMA:72620 ! Tectospinal tract
xref: NIF_GrossAnatomy:birnlex_759 ! Tectospinal tract
is_a: UBERON:0002316 ! white matter of neuraxis
relationship: part_of UBERON:0001896 ! medulla oblongata

[Term]
id: UBERON:0002950
name: regional part of midbrain
alt_id: UBERON:NIF_GrossAnatomy_birnlex_763-FMA_61997
synonym: "midbrain segment" EXACT [FMA:61997]
synonym: "segment of midbrain" EXACT [NIF_GrossAnatomy:birnlex_763]
xref: FMA:61997 ! Segment of midbrain
xref: NIF_GrossAnatomy:birnlex_763 ! Regional part of midbrain
is_a: UBERON:0002616 ! regional part of brain
intersection_of: UBERON:0002616 ! regional part of brain
intersection_of: part_of UBERON:0001891 ! midbrain

[Term]
id: UBERON:0002951
name: regional part of intermediate hypothalamic region
alt_id: UBERON:NIF_GrossAnatomy_birnlex_767-FMA_62310
synonym: "intermediate hypothalamic region segment" EXACT [FMA:62310]
synonym: "segment of intermediate hypothalamic region" EXACT [NIF_GrossAnatomy:birnlex_767]
xref: FMA:62310 ! Segment of intermediate hypothalamic region
xref: NIF_GrossAnatomy:birnlex_767 ! Regional part of intermediate hypothalamic region
is_a: UBERON:0003048 ! regional part of hypothalamus
intersection_of: UBERON:0002616 ! regional part of brain
intersection_of: part_of UBERON:0002555 ! intermediate hypothalamic region

[Term]
id: UBERON:0002952
name: intermediate acoustic stria
alt_id: UBERON:NIF_GrossAnatomy_birnlex_768-FMA_72497
synonym: "commissure of Held" EXACT [FMA:72497]
synonym: "commissure of held" EXACT []
synonym: "intermediate acoustic stria of Held" EXACT [FMA:72497]
synonym: "intermediate acoustic stria of held" EXACT []
xref: FMA:72497 ! Intermediate acoustic stria
xref: NIF_GrossAnatomy:birnlex_768 ! Intermediate acoustic stria
is_a: UBERON:0002316 ! white matter of neuraxis

[Term]
id: UBERON:0002953
name: lateral lemniscus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_774-FMA_72502
def: "." [Wikipedia:Lateral_lemniscus]
subset: uberon_slim
synonym: "lateral fillet" EXACT [FMA:72502]
xref: FMA:72502 ! Lateral lemniscus
xref: NIF_GrossAnatomy:birnlex_774 ! Lateral lemniscus
is_a: UBERON:0002316 ! white matter of neuraxis

[Term]
id: UBERON:0002954
name: dorsal hypothalamic area
alt_id: UBERON:NIF_GrossAnatomy_birnlex_777-FMA_62339
xref: FMA:62339 ! Dorsal hypothalamic area
xref: NIF_GrossAnatomy:birnlex_777 ! Dorsal hypothalamic area
is_a: UBERON:0000477 ! anatomical cluster

[Term]
id: UBERON:0002955
name: rhomboidal nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_778-FMA_62154
synonym: "rhomboid nucleus" EXACT [FMA:62154]
synonym: "rhomboid thalamic nucleus" EXACT [FMA:62154]
xref: FMA:62154 ! Rhomboidal nucleus
xref: NIF_GrossAnatomy:birnlex_778 ! Rhomboidal nucleus
is_a: UBERON:0002308 ! nucleus of brain
xref: BTO:0002458 ! rhomboid nucleus

[Term]
id: UBERON:0002956
name: granular layer of cerebellar cortex
alt_id: UBERON:NIF_GrossAnatomy_birnlex_779-FMA_83140
xref: FMA:83140 ! Granular layer of cerebellar cortex
xref: NIF_GrossAnatomy:birnlex_779 ! Granular layer of cerebellar cortex
is_a: UBERON:0002020 ! gray matter of neuraxis

[Term]
id: UBERON:0002957
name: caudal central oculomotor nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_780-FMA_72426
synonym: "caudal central nucleus" EXACT [FMA:72426]
synonym: "caudal central nucleus of oculomotor nerve" EXACT [FMA:72426]
xref: FMA:72426 ! Caudal central oculomotor nucleus
xref: NIF_GrossAnatomy:birnlex_780 ! Caudal central oculomotor nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0002958
name: medial lemniscus of pons
alt_id: UBERON:NIF_GrossAnatomy_birnlex_781-FMA_72503
xref: FMA:72503 ! Medial lemniscus of pons
xref: NIF_GrossAnatomy:birnlex_781 ! Medial lemniscus of pons
is_a: UBERON:0003002 ! medial lemniscus
intersection_of: UBERON:0003002 ! medial lemniscus
intersection_of: part_of UBERON:0000988 ! pons

[Term]
id: UBERON:0002959
name: subfascicular nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_783-FMA_62155
xref: FMA:62155 ! Subfascicular nucleus
xref: NIF_GrossAnatomy:birnlex_783 ! Subfascicular nucleus
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0002960
name: central oculomotor nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_786-FMA_72425
synonym: "central nucleus of Perlia" EXACT [FMA:72425]
synonym: "central nucleus of perlia" EXACT []
synonym: "nucleus of Perlia" EXACT [FMA:72425]
synonym: "nucleus of perlia" EXACT []
synonym: "spitzka's nucleus" EXACT [FMA:72425]
xref: FMA:72425 ! Central oculomotor nucleus
xref: NIF_GrossAnatomy:birnlex_786 ! Central oculomotor nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0002961
name: archicortex
alt_id: UBERON:NIF_GrossAnatomy_birnlex_787-FMA_62424
def: "A portion of the cerebral cortex that, with the paleocortex, develops in association with the olfactory system, and which is phylogenetically older than the neocortex and lacks its layered structure. The embryonic archicortex corresponds to the cortex of the dentate gyrus and hippocampus in mature mammals. Being part of the limbic system, it has functions related to emotions and formation of memory. Signals being sent from the limbic lobe to the hippocampal formations can go via the archicortex as an intermediate." [Wikipedia:Archicortex]
subset: uberon_slim
synonym: "archipallium" EXACT [FMA:62424]
xref: FMA:62424 ! Archicortex
xref: NIF_GrossAnatomy:birnlex_787
is_a: UBERON:0003208 ! region of cerebral cortex

[Term]
id: UBERON:0002962
name: microtubule
alt_id: UBERON:NIF_GrossAnatomy_birnlex_788-FMA_63849
def: "." [Wikipedia:Microtubule]
subset: uberon_slim
synonym: "microtubulus" EXACT [FMA:63849]
xref: FMA:63849 ! Microtubule
xref: NIF_GrossAnatomy:birnlex_788
is_a: UBERON:0000470 ! cell part
xref: ncithesaurus:Microtubule ! Microtubule

[Term]
id: UBERON:0002963
name: caudal pontine reticular nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_792-FMA_72469
def: "." [Wikipedia:Caudal_pontine_reticular_nucleus]
subset: uberon_slim
synonym: "pontine reticular nucleus, caudal part" EXACT [FMA:72469]
xref: FMA:72469 ! Caudal pontine reticular nucleus
xref: NIF_GrossAnatomy:birnlex_792 ! Caudal pontine reticular nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0002964
name: dorsal oculomotor nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_793-FMA_62442
synonym: "dorsal oculomotor cell column" EXACT [FMA:62442]
xref: FMA:62442 ! Dorsal oculomotor nucleus
xref: NIF_GrossAnatomy:birnlex_793 ! Dorsal oculomotor nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0002965
name: rostral intralaminar nuclei
alt_id: UBERON:NIF_GrossAnatomy_birnlex_794-FMA_62164
synonym: "rostral intralaminar nuclei" EXACT [FMA:62164]
xref: FMA:62164 ! Rostral intralaminar nuclear group
xref: NIF_GrossAnatomy:birnlex_794 ! Rostral intralaminar nuclei
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0002966
name: regional part of midbrain tectum
alt_id: UBERON:NIF_GrossAnatomy_birnlex_795-FMA_62398
synonym: "midbrain tectum segment" EXACT [FMA:62398]
synonym: "segment of midbrain tectum" EXACT [NIF_GrossAnatomy:birnlex_795]
xref: FMA:62398 ! Segment of midbrain tectum
xref: NIF_GrossAnatomy:birnlex_795 ! Regional part of midbrain tectum
is_a: UBERON:0002616 ! regional part of brain
intersection_of: UBERON:0002616 ! regional part of brain
intersection_of: part_of UBERON:0002314 ! midbrain tectum

[Term]
id: UBERON:0002967
name: cingulate gyrus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_798-FMA_62434
def: "A gyrus in the medial part of the brain. It partially wraps around the corpus callosum and is limited above by the cingulate sulcus. The cortical part of the cingulate gyrus is referred to as cingulate cortex.[Wikipedia]. The cingulate gyrus receives inputs from the anterior nucleus of the thalamus and the neocortex, as well as from somatosensory areas of the cerebral cortex. It projects to the entorhinal cortex via the cingulum. It functions as an integral part of the limbic system, which is involved with emotion formation and processing, learning, and memory. Also, executive control needed to suppress inappropriate unconscious priming is known to involve the anterior cingulate gyrus. It is also involved in respiratory control." [Wikipedia:Cingulate_gyrus]
subset: uberon_slim
synonym: "cingulate area" EXACT [FMA:62434]
synonym: "cingulate region" EXACT [FMA:62434]
synonym: "falciform lobe" EXACT [FMA:62434]
synonym: "upper limbic gyrus" EXACT [FMA:62434]
xref: FMA:62434 ! Cingulate gyrus
xref: NIF_GrossAnatomy:birnlex_798 ! Cingulate gyrus
is_a: UBERON:0000200 ! gyrus
relationship: part_of UBERON:0000349 ! limbic system
xref: BTO:0003976 ! cingulate gyrus

[Term]
id: UBERON:0002968
name: central gray substance of pons
alt_id: UBERON:NIF_GrossAnatomy_birnlex_799-FMA_72470
synonym: "central gray of pons" EXACT [FMA:72470]
synonym: "pontine central gray" EXACT [FMA:72470]
xref: FMA:72470 ! Central gray substance of pons
xref: NIF_GrossAnatomy:birnlex_799 ! Central gray substance of pons
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0002969
name: inferior temporal sulcus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_800-FMA_83784
synonym: "inferior temporal sulcus-1" EXACT [FMA:83784]
synonym: "middle temporal sulcus (Szikla)" EXACT [FMA:83784]
synonym: "middle temporal sulcus (szikla)" EXACT []
synonym: "second temporal sulcus" EXACT [FMA:83784]
synonym: "sulcus t2" EXACT [FMA:83784]
xref: FMA:83784 ! Inferior temporal sulcus
xref: NIF_GrossAnatomy:birnlex_800 ! Inferior temporal sulcus
is_a: UBERON:0000093 ! sulcus
xref: ncithesaurus:Inferior_Temporal_Sulcus ! Inferior Temporal Sulcus

[Term]
id: UBERON:0002970
name: intermediate oculomotor nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_803-FMA_72420
synonym: "intermediate oculomotor cell column" EXACT [FMA:72420]
xref: FMA:72420 ! Intermediate oculomotor nucleus
xref: NIF_GrossAnatomy:birnlex_803 ! Intermediate oculomotor nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0002971
name: periolivary nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_804-MA_0002757
xref: MA:0002757 ! periolivary nucleus
xref: NIF_GrossAnatomy:birnlex_804 ! Periolivary nucleus
is_a: UBERON:0002680 ! regional part of metencephalon
relationship: part_of UBERON:0002128 ! superior olivary complex

[Term]
id: UBERON:0002972
name: centromedian nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_805-FMA_62165
def: "." [Wikipedia:Centromedian_nucleus]
subset: uberon_slim
synonym: "central magnocellular nucleus of thalamus" EXACT [FMA:62165]
synonym: "central nucleus-1" EXACT [FMA:62165]
synonym: "centre median nucleus" EXACT [FMA:62165]
synonym: "centromedian nucleus of thalamus" EXACT [FMA:62165]
synonym: "centromedian thalamic nucleus" EXACT [FMA:62165]
synonym: "noyau centre median of Luys" EXACT [FMA:62165]
synonym: "noyau centre median of luys" EXACT []
xref: FMA:62165 ! Centromedian nucleus
xref: NIF_GrossAnatomy:birnlex_805 ! Centromedian nucleus
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0002973
name: parahippocampal gyrus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_807-FMA_61918
def: "a grey matter cortical region of the brain that surrounds the hippocampus. This region plays an important role in memory encoding and retrieval. The anterior part of the gyrus includes the perirhinal and entorhinal cortices. The term parahippocampal cortex is used to refer to an area that encompasses both the posterior portion of the parahippocampal gyrus and the medial portion of the fusiform gyrus.[Wikipedia]." [Wikipedia:Parahippocampal_gyrus]
subset: uberon_slim
synonym: "hippocampal gyrus" EXACT [FMA:61918]
xref: FMA:61918 ! Parahippocampal gyrus
xref: NIF_GrossAnatomy:birnlex_807 ! Parahippocampal gyrus
is_a: UBERON:0000200 ! gyrus
relationship: part_of UBERON:0000349 ! limbic system
relationship: part_of UBERON:0001871 ! temporal lobe
relationship: surrounds UBERON:0001954 ! hippocampus
xref: ncithesaurus:Parahippocampal_Gyrus ! Parahippocampal Gyrus

[Term]
id: UBERON:0002974
name: molecular layer of cerebellar cortex
alt_id: UBERON:NIF_GrossAnatomy_birnlex_810-FMA_83897
xref: FMA:83897 ! Molecular layer of cerebellar cortex
xref: NIF_GrossAnatomy:birnlex_810 ! Molecular layer of cerebellar cortex
is_a: UBERON:0002020 ! gray matter of neuraxis

[Term]
id: UBERON:0002975
name: medial oculomotor nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_813-FMA_72421
synonym: "medial oculomotor cell column" EXACT [FMA:72421]
xref: FMA:72421 ! Medial oculomotor nucleus
xref: NIF_GrossAnatomy:birnlex_813 ! Medial oculomotor nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0002976
name: preolivary nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_814-FMA_72474
synonym: "preolivary nuclei" EXACT [FMA:72474]
xref: FMA:72474 ! Preolivary nucleus
xref: NIF_GrossAnatomy:birnlex_814 ! Preolivary nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0002128 ! superior olivary complex

[Term]
id: UBERON:0002977
name: triangular septal nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_816-FMA_61880
synonym: "triangular nucleus of septum" EXACT [FMA:61880]
xref: FMA:61880 ! Triangular septal nucleus
xref: NIF_GrossAnatomy:birnlex_816 ! Triangular septal nucleus
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0002978
name: oral part of ventral lateral nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_817-FMA_62193
synonym: "ventral anterior nucleus, pars densicellularis" EXACT [FMA:62193]
synonym: "ventral lateral anterior nucleus" EXACT [FMA:62193]
synonym: "ventral lateral nucleus, oral part" EXACT [FMA:62193]
synonym: "ventral lateral thalamic nucleus, oral part" EXACT [FMA:62193]
xref: FMA:62193 ! Oral part of ventral lateral nucleus
xref: NIF_GrossAnatomy:birnlex_817 ! Oral part of ventral lateral nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis
relationship: part_of UBERON:0001925 ! ventral lateral nucleus

[Term]
id: UBERON:0002979
name: purkinje cell layer of cerebellar cortex
alt_id: UBERON:NIF_GrossAnatomy_birnlex_818-FMA_83896
synonym: "purkinje cell layer" EXACT [FMA:83896]
xref: FMA:83896 ! Purkinje cell layer of cerebellar cortex
xref: NIF_GrossAnatomy:birnlex_818 ! Purkinje cell layer of cerebellar cortex
is_a: UBERON:0002020 ! gray matter of neuraxis
relationship: has_part CL:0000121 ! Purkinje cell

[Term]
id: UBERON:0002980
name: opercular part of inferior frontal gyrus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_823-FMA_61981
synonym: "opercular portion of inferior frontal gyrus" EXACT [FMA:61981]
synonym: "posterior part of inferior frontal gyrus" EXACT [FMA:61981]
xref: FMA:61981 ! Opercular part of inferior frontal gyrus
xref: NIF_GrossAnatomy:birnlex_823 ! Opercular part of inferior frontal gyrus
is_a: UBERON:0000064 ! organ part

[Term]
id: UBERON:0002981
name: pulvinar
alt_id: UBERON:NIF_GrossAnatomy_birnlex_824-FMA_62178
def: "." [Wikipedia:Pulvinar]
subset: uberon_slim
synonym: "pulvinar nuclei" EXACT [FMA:62178]
synonym: "pulvinar nucleus" EXACT [FMA:62178]
xref: FMA:62178 ! Pulvinar
xref: NIF_GrossAnatomy:birnlex_824 ! Pulvinar
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0002982
name: inferior pulvinar nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_830-FMA_62183
xref: FMA:62183 ! Inferior pulvinar nucleus
xref: NIF_GrossAnatomy:birnlex_830 ! Inferior pulvinar nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0002983
name: lateral posterior nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_835-FMA_62177
synonym: "lateral posterior nucleus of thalamus" EXACT [FMA:62177]
synonym: "lateral posterior thalamic nucleus" EXACT [FMA:62177]
synonym: "laterodorsal nucleus, caudal part" EXACT [FMA:62177]
synonym: "posterior lateral nucleus of thalamus" EXACT [FMA:62177]
xref: FMA:62177 ! Lateral posterior nucleus
xref: NIF_GrossAnatomy:birnlex_835 ! Lateral posterior nucleus
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0002984
name: lateral dorsal nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_838-FMA_62176
synonym: "lateral dorsal nucleus of thalamus" EXACT [FMA:62176]
synonym: "lateral dorsal thalamic nucleus" EXACT [FMA:62176]
synonym: "laterodorsal nucleus, superficial part" EXACT [FMA:62176]
synonym: "laterodorsal thalamic nucleus" EXACT [FMA:62176]
xref: FMA:62176 ! Lateral dorsal nucleus
xref: NIF_GrossAnatomy:birnlex_838 ! Lateral dorsal nucleus
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0002985
name: ventral nucleus of medial geniculate body
alt_id: UBERON:NIF_GrossAnatomy_birnlex_845-FMA_62217
synonym: "medial geniculate complex, ventral part" EXACT [FMA:62217]
synonym: "medial geniculate nucleus, ventral part" EXACT [FMA:62217]
synonym: "ventral nucleus of medial geniculate complex" EXACT [FMA:62217]
synonym: "ventral principal nucleus of medial geniculate body" EXACT [FMA:62217]
xref: FMA:62217 ! Ventral nucleus of medial geniculate body
xref: NIF_GrossAnatomy:birnlex_845 ! Ventral nucleus of medial geniculate body
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0001927 ! medial geniculate body
xref: BTO:0002671 ! ventral principal nucleus of medial geniculate body

[Term]
id: UBERON:0002986
name: neurofilament
alt_id: UBERON:NIF_GrossAnatomy_birnlex_846-FMA_63859
def: "." [Wikipedia:Neurofilament]
subset: uberon_slim
synonym: "neuronal intermediate filament" EXACT [FMA:63859]
xref: FMA:63859 ! Neurofilament
xref: NIF_GrossAnatomy:birnlex_846
is_a: UBERON:0003000 ! intermediate filament
xref: ncithesaurus:Neurofilament ! Neurofilament

[Term]
id: UBERON:0002987
name: anterior spinocerebellar tract
alt_id: UBERON:NIF_GrossAnatomy_birnlex_848-FMA_72642
def: "." [Wikipedia:Anterior_spinocerebellar_tract]
subset: uberon_slim
synonym: "gowers' tract" EXACT [FMA:72642]
synonym: "ventral spinocerebellar tract" EXACT [FMA:72642]
xref: FMA:72642 ! Anterior spinocerebellar tract
xref: NIF_GrossAnatomy:birnlex_848 ! Anterior spinocerebellar tract
is_a: UBERON:0002316 ! white matter of neuraxis
relationship: part_of UBERON:0001896 ! medulla oblongata

[Term]
id: UBERON:0002990
name: mammillothalamic tract of hypothalamus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_855-FMA_62059
xref: FMA:62059 ! Mammillothalamic tract of hypothalamus
xref: NIF_GrossAnatomy:birnlex_855 ! Mammillothalamic tract of hypothalamus
is_a: UBERON:0002316 ! white matter of neuraxis

[Term]
id: UBERON:0002991
name: supramammillary commissure
alt_id: UBERON:NIF_GrossAnatomy_birnlex_859-FMA_62056
synonym: "commissure of Forel" EXACT [FMA:62056]
synonym: "commissure of forel" EXACT []
synonym: "commissure y" EXACT [FMA:62056]
synonym: "postmammillary decussation" EXACT [FMA:62056]
synonym: "supramammillary decussation" EXACT [FMA:62056]
xref: FMA:62056 ! Supramammillary commissure
xref: NIF_GrossAnatomy:birnlex_859 ! Supramammillary commissure
is_a: UBERON:0000477 ! anatomical cluster

[Term]
id: UBERON:0002992
name: paratenial nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_860-FMA_62151
synonym: "parataenial nucleus" EXACT [FMA:62151]
synonym: "paratenial thalamic nucleus" EXACT [FMA:62151]
xref: FMA:62151 ! Paratenial nucleus
xref: NIF_GrossAnatomy:birnlex_860 ! Paratenial nucleus
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0002993
name: inferior central nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_861-FMA_72466
def: "." [Wikipedia:Inferior_central_nucleus]
subset: uberon_slim
synonym: "inferior central nucleus (of Roller)" EXACT [FMA:72466]
synonym: "inferior central nucleus (of roller)" EXACT []
synonym: "inferior central nucleus of raphe" EXACT [FMA:72466]
synonym: "inferior central tegmental nucleus" EXACT [FMA:72466]
xref: FMA:72466 ! Inferior central nucleus
xref: NIF_GrossAnatomy:birnlex_861 ! Inferior central nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0002994
name: nucleus of pretectal area
alt_id: UBERON:NIF_GrossAnatomy_birnlex_864-FMA_72401
synonym: "pretectal area nucleus" EXACT [FMA:72401]
xref: FMA:72401 ! Nucleus of pretectal area
xref: NIF_GrossAnatomy:birnlex_864 ! Nucleus of pretectal area
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0001944 ! pretectal region

[Term]
id: UBERON:0002995
name: substantia nigra pars lateralis
alt_id: UBERON:NIF_GrossAnatomy_birnlex_866-MA_0001065
xref: MA:0001065 ! substantia nigra pars lateralis
xref: NIF_GrossAnatomy:birnlex_866 ! Substantia nigra pars lateralis
is_a: UBERON:0002950 ! regional part of midbrain
relationship: part_of UBERON:0002038 ! substantia nigra

[Term]
id: UBERON:0002996
name: nucleus of optic tract
alt_id: UBERON:NIF_GrossAnatomy_birnlex_868-FMA_72403
synonym: "large-celled nucleus of optic tract" EXACT [FMA:72403]
synonym: "lentiform nucleus of pretectal area" EXACT [FMA:72403]
synonym: "optic tract nucleus" EXACT [FMA:72403]
xref: FMA:72403 ! Nucleus of optic tract
xref: NIF_GrossAnatomy:birnlex_868 ! Nucleus of optic tract
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain
relationship: part_of UBERON:0001944 ! pretectal region

[Term]
id: UBERON:0002997
name: nucleus of medial eminence
alt_id: UBERON:NIF_GrossAnatomy_birnlex_870-FMA_72467
synonym: "medial eminence nucleus" EXACT [FMA:72467]
synonym: "nucleus of eminentia teres" EXACT [FMA:72467]
xref: FMA:72467 ! Nucleus of medial eminence
xref: NIF_GrossAnatomy:birnlex_870 ! Nucleus of medial eminence
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0002998
name: inferior frontal gyrus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_873-FMA_61860
def: "." [Wikipedia:Inferior_frontal_gyrus]
subset: uberon_slim
synonym: "inferior frontal convolution" EXACT [FMA:61860]
xref: FMA:61860 ! Inferior frontal gyrus
xref: NIF_GrossAnatomy:birnlex_873 ! Inferior frontal gyrus
is_a: UBERON:0000064 ! organ part
relationship: part_of UBERON:0001870 ! frontal lobe
xref: ncithesaurus:Inferior_Frontal_Convolution ! Inferior Frontal Convolution

[Term]
id: UBERON:0002999
name: oral pontine reticular nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_875-FMA_72468
def: "." [Wikipedia:Oral_pontine_reticular_nucleus]
subset: uberon_slim
synonym: "pontine reticular nucleus, rostral part" EXACT [FMA:72468]
xref: FMA:72468 ! Oral pontine reticular nucleus
xref: NIF_GrossAnatomy:birnlex_875 ! Oral pontine reticular nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0003000
name: intermediate filament
alt_id: UBERON:NIF_GrossAnatomy_birnlex_879-FMA_63851
def: "." [Wikipedia:Intermediate_filament]
subset: uberon_slim
xref: FMA:63851 ! Intermediate filament
xref: NIF_GrossAnatomy:birnlex_879
is_a: UBERON:0000470 ! cell part
xref: ncithesaurus:Intermediate_Filament ! Intermediate Filament

[Term]
id: UBERON:0003001
name: lemniscus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_881-FMA_76742
def: "." [Wikipedia:Lemniscus]
subset: uberon_slim
xref: FMA:76742 ! Lemniscus
xref: NIF_GrossAnatomy:birnlex_881 ! Lemniscus
is_a: UBERON:0000061 ! anatomical structure

[Term]
id: UBERON:0003002
name: medial lemniscus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_887-FMA_83675
def: "." [Wikipedia:Medial_lemniscus]
subset: uberon_slim
xref: FMA:83675 ! Medial lemniscus
xref: NIF_GrossAnatomy:birnlex_887 ! Medial lemniscus
is_a: UBERON:0002316 ! white matter of neuraxis

[Term]
id: UBERON:0003003
name: microfilament
alt_id: UBERON:NIF_GrossAnatomy_birnlex_888-FMA_63850
def: "." [Wikipedia:Microfilament]
subset: uberon_slim
synonym: "microfilament" EXACT [FMA:63850]
synonym: "microfilamentum" EXACT [FMA:63850]
xref: FMA:63850 ! Actin filament
xref: NIF_GrossAnatomy:birnlex_888
is_a: UBERON:0000470 ! cell part

[Term]
id: UBERON:0003004
name: superior central nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_889-FMA_72465
def: "." [Wikipedia:Superior_central_nucleus]
subset: uberon_slim
synonym: "cell group B8" EXACT [FMA:72465]
synonym: "cell group b8" EXACT []
synonym: "median nucleus of the raphe" EXACT [FMA:72465]
synonym: "median raphe nucleus" EXACT [FMA:72465]
synonym: "superior central nucleus raphe" EXACT [FMA:72465]
synonym: "superior central tegmental nucleus" EXACT [FMA:72465]
xref: FMA:72465 ! Superior central nucleus
xref: NIF_GrossAnatomy:birnlex_889 ! Superior central nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0003005
name: dorsal longitudinal fasciculus of midbrain
alt_id: UBERON:NIF_GrossAnatomy_birnlex_893-FMA_72453
xref: FMA:72453 ! Dorsal longitudinal fasciculus of midbrain
xref: NIF_GrossAnatomy:birnlex_893 ! Dorsal longitudinal fasciculus of midbrain
is_a: UBERON:0003045 ! dorsal longitudinal fasciculus
intersection_of: UBERON:0003045 ! dorsal longitudinal fasciculus
intersection_of: part_of UBERON:0001891 ! midbrain
relationship: part_of UBERON:0001943 ! midbrain tegmentum

[Term]
id: UBERON:0003006
name: dorsal nucleus of lateral lemniscus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_894-FMA_72483
synonym: "dorsal nucleus of the lateral lemniscus" EXACT [FMA:72483]
synonym: "posterior nucleus of lateral lemniscus" EXACT [FMA:72483]
xref: FMA:72483 ! Dorsal nucleus of lateral lemniscus
xref: NIF_GrossAnatomy:birnlex_894 ! Dorsal nucleus of lateral lemniscus
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0003007
name: lateral parabrachial nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_897-FMA_72481
def: "." [Wikipedia:Lateral_parabrachial_nucleus]
subset: uberon_slim
xref: FMA:72481 ! Lateral parabrachial nucleus
xref: NIF_GrossAnatomy:birnlex_897 ! Lateral parabrachial nucleus
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0003008
name: dorsal longitudinal fasciculus of hypothalamus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_898-FMA_62063
xref: FMA:62063 ! Dorsal longitudinal fasciculus of hypothalamus
xref: NIF_GrossAnatomy:birnlex_898 ! Dorsal longitudinal fasciculus of hypothalamus
is_a: UBERON:0002316 ! white matter of neuraxis
is_a: UBERON:0003045 ! dorsal longitudinal fasciculus
intersection_of: UBERON:0003045 ! dorsal longitudinal fasciculus
intersection_of: part_of UBERON:0001898 ! hypothalamus
relationship: part_of UBERON:0002430 ! lateral hypothalamic area

[Term]
id: UBERON:0003009
name: dorsal tegmental decussation
alt_id: UBERON:NIF_GrossAnatomy_birnlex_901-FMA_72451
synonym: "dorsal fountain decussation" EXACT [FMA:72451]
synonym: "fountain decussation of Meynert" EXACT [FMA:72451]
synonym: "fountain decussation of meynert" EXACT []
synonym: "meynert's decussation" EXACT [FMA:72451]
synonym: "posterior tegmental decussation" EXACT [FMA:72451]
xref: FMA:72451 ! Dorsal tegmental decussation
xref: NIF_GrossAnatomy:birnlex_901 ! Dorsal tegmental decussation
is_a: UBERON:0002316 ! white matter of neuraxis
relationship: part_of UBERON:0001943 ! midbrain tegmentum

[Term]
id: UBERON:0003010
name: lateral pes lemniscus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_902-FMA_72459
synonym: "deep pes lemniscus" EXACT [FMA:72459]
synonym: "lateral pontine bundle" EXACT [FMA:72459]
synonym: "laterale Haubenfussschleife" EXACT [FMA:72459]
synonym: "laterale haubenfussschleife" EXACT []
synonym: "laterale pontine Buendel" EXACT [FMA:72459]
synonym: "laterale pontine buendel" EXACT []
xref: FMA:72459 ! Lateral pes lemniscus
xref: NIF_GrossAnatomy:birnlex_902 ! Lateral pes lemniscus
is_a: UBERON:0002316 ! white matter of neuraxis
relationship: part_of UBERON:0001943 ! midbrain tegmentum

[Term]
id: UBERON:0003011
name: facial motor nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_903-FMA_54582
def: "." [Wikipedia:Facial_motor_nucleus]
subset: uberon_slim
synonym: "branchiomotor nucleus of facial nerve" EXACT [FMA:54582]
synonym: "facial motor nucleus" EXACT [FMA:54582]
synonym: "facial nucleus" RELATED [Wikipedia:Facial_nucleus]
synonym: "motor nucleus of VII" EXACT [FMA:54582]
synonym: "motor nucleus of vii" EXACT []
xref: FMA:54582 ! Motor nucleus of facial nerve
xref: NIF_GrossAnatomy:birnlex_903 ! Facial motor nucleus
xref: ZFA:0000206 ! facial nerve motor nucleus
is_a: UBERON:0000127 ! facial nucleus

[Term]
id: UBERON:0003012
name: flocculonodular lobe
alt_id: UBERON:NIF_GrossAnatomy_birnlex_904-FMA_72253
def: "." [Wikipedia:Flocculonodular_lobe]
subset: uberon_slim
synonym: "flocculonodular lobe" EXACT [FMA:72253]
synonym: "posterior lobe-2 of cerebellum" EXACT [FMA:72253]
xref: FMA:72253 ! Flocculonodular lobe of cerebellum
xref: NIF_GrossAnatomy:birnlex_904 ! Flocculonodular lobe
is_a: UBERON:0000477 ! anatomical cluster
relationship: part_of UBERON:0002129 ! cerebellar cortex

[Term]
id: UBERON:0003013
name: alar central lobule
alt_id: UBERON:NIF_GrossAnatomy_birnlex_907-FMA_72517
def: "." [Wikipedia:Alar_central_lobule]
subset: uberon_slim
synonym: "alae of central lobule" EXACT [FMA:72517]
synonym: "lobules II, III of vermis" EXACT [FMA:72517]
synonym: "lobules ii, iii of vermis" EXACT []
xref: FMA:72517 ! Alar central lobule
xref: NIF_GrossAnatomy:birnlex_907 ! Alar central lobule
is_a: UBERON:0000477 ! anatomical cluster

[Term]
id: UBERON:0003014
name: tuberal part of hypophysis
alt_id: UBERON:NIF_GrossAnatomy_birnlex_912-FMA_74635
synonym: "infundibular stem of neurohypophysis" EXACT [FMA:74635]
synonym: "infundibulum of pituitary gland" EXACT [FMA:74635]
synonym: "infundibulum of posterior lobe of pituitary gland" EXACT [FMA:74635]
synonym: "neurohypophysis infundibulum" EXACT [FMA:74635]
synonym: "tuberal part of hypophysis" EXACT [FMA:74635]
xref: FMA:74635 ! Infundibulum of neurohypophysis
xref: NIF_GrossAnatomy:birnlex_912 ! Tuberal part of hypophysis
is_a: UBERON:0000064 ! organ part

[Term]
id: UBERON:0003015
name: anterior quadrangular lobule
alt_id: UBERON:NIF_GrossAnatomy_birnlex_913-FMA_72516
synonym: "anterior crescentic lobule of cerebellum" EXACT [FMA:72516]
synonym: "anterior quadrangular lobule of cerebellum" EXACT [FMA:72516]
synonym: "anterior quadrangular lobule of cerebellum [H IV et V]" EXACT [FMA:72516]
synonym: "anterior quadrangular lobule of cerebellum [h iv et v]" EXACT []
synonym: "anterior semilunar lobule" EXACT [FMA:72516]
synonym: "semilunar lobule-1 (anterior)" EXACT [FMA:72516]
xref: FMA:72516 ! Anterior quadrangular lobule
xref: NIF_GrossAnatomy:birnlex_913 ! Anterior quadrangular lobule
is_a: UBERON:0000477 ! anatomical cluster

[Term]
id: UBERON:0003016
name: postcommissural fornix
alt_id: UBERON:NIF_GrossAnatomy_birnlex_914-FMA_62062
xref: FMA:62062 ! Postcommissural fornix
xref: NIF_GrossAnatomy:birnlex_914 ! Postcommissural fornix
is_a: UBERON:0002316 ! white matter of neuraxis
relationship: part_of UBERON:0002430 ! lateral hypothalamic area

[Term]
id: UBERON:0003017
name: substantia innominata
alt_id: UBERON:NIF_GrossAnatomy_birnlex_915-FMA_61885
def: "." [Wikipedia:Substantia_innominata]
subset: uberon_slim
synonym: "innominate substance" EXACT [FMA:61885]
synonym: "nucleus of substantia innominata" EXACT [FMA:61885]
xref: FMA:61885 ! Substantia innominata
xref: NIF_GrossAnatomy:birnlex_915 ! Substantia innominata
is_a: UBERON:0002308 ! nucleus of brain
xref: BTO:0002447 ! substantia innominata

[Term]
id: UBERON:0003018
name: parvicellular part of ventral posteromedial nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_917-FMA_62207
synonym: "gustatory thalamic nucleus" EXACT [FMA:62207]
synonym: "parvicellular part of ventral posteromedial nucleus of thalamus" EXACT [FMA:62207]
synonym: "ventral posteromedial nucleus of thalamus, parvicellular part" EXACT [FMA:62207]
synonym: "ventral posteromedial nucleus, parvocellular part" EXACT [FMA:62207]
synonym: "ventral posteromedial thalamic nucleus, parvicellular part" EXACT [FMA:62207]
xref: FMA:62207 ! Parvicellular part of ventral posteromedial nucleus
xref: NIF_GrossAnatomy:birnlex_917 ! Parvicellular part of ventral posteromedial nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis

[Term]
id: UBERON:0003019
name: oral part of ventral posterolateral nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_918-FMA_62205
synonym: "ventral part of ventral lateral posterior nucleus (Jones)" EXACT [FMA:62205]
synonym: "ventral part of ventral lateral posterior nucleus (jones)" EXACT []
synonym: "ventral posterolateral nucleus, oral part" EXACT [FMA:62205]
synonym: "ventral posterolateral thalamic nucleus, oral part" EXACT [FMA:62205]
xref: FMA:62205 ! Oral part of ventral posterolateral nucleus
xref: NIF_GrossAnatomy:birnlex_918 ! Oral part of ventral posterolateral nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis

[Term]
id: UBERON:0003020
name: subcallosal area
alt_id: UBERON:NIF_GrossAnatomy_birnlex_919-FMA_61890
def: "." [Wikipedia:Subcallosal_area]
subset: uberon_slim
synonym: "adolfactory area" EXACT [FMA:61890]
synonym: "paraolfactory area" EXACT [FMA:61890]
synonym: "parolfactory area" EXACT [FMA:61890]
xref: FMA:61890 ! Subcallosal area
xref: NIF_GrossAnatomy:birnlex_919 ! Subcallosal area
is_a: UBERON:0002020 ! gray matter of neuraxis

[Term]
id: UBERON:0003021
name: central lobule
alt_id: UBERON:NIF_GrossAnatomy_birnlex_920-FMA_72519
def: "." [Wikipedia:Central_lobule]
subset: uberon_slim
synonym: "central lobule of cerebellum" EXACT [FMA:72519]
synonym: "central lobule of cerebellum [II and III]" EXACT [FMA:72519]
synonym: "central lobule of cerebellum [ii and iii]" EXACT []
xref: FMA:72519 ! Central lobule
xref: NIF_GrossAnatomy:birnlex_920 ! Central lobule
is_a: UBERON:0000477 ! anatomical cluster

[Term]
id: UBERON:0003022
name: lobe parts of cerebral cortex
alt_id: UBERON:NIF_GrossAnatomy_birnlex_922-FMA_68603
synonym: "cerebral cortical segment" EXACT [FMA:68603]
synonym: "regional organ part of cerebral cortex" EXACT [FMA:68603]
synonym: "segment of cerebral cortex" EXACT [NIF_GrossAnatomy:birnlex_922]
xref: FMA:68603 ! Segment of cerebral cortex
xref: NIF_GrossAnatomy:birnlex_922 ! Lobe parts of cerebral cortex
is_a: UBERON:0000063 ! organ segment

[Term]
id: UBERON:0003023
name: pontine tegmentum
alt_id: UBERON:NIF_GrossAnatomy_birnlex_923-FMA_71108
def: "." [Wikipedia:Pontine_tegmentum]
subset: uberon_slim
synonym: "dorsal portion of pons" EXACT [FMA:71108]
synonym: "tegmental portion of pons" EXACT [FMA:71108]
synonym: "tegmentum of pons" EXACT [FMA:71108]
xref: FMA:71108 ! Pontine tegmentum
xref: NIF_GrossAnatomy:birnlex_923 ! Pontine tegmentum
is_a: UBERON:0000064 ! organ part
relationship: has_part UBERON:0002047 ! pontine raphe nucleus
relationship: has_part UBERON:0002128 ! superior olivary complex
relationship: has_part UBERON:0002148 ! locus ceruleus
relationship: has_part UBERON:0002149 ! superior salivatory nucleus
relationship: part_of UBERON:0000988 ! pons

[Term]
id: UBERON:0003024
name: principal part of ventral posteromedial nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_927-FMA_62208
xref: FMA:62208 ! Principal part of ventral posteromedial nucleus
xref: NIF_GrossAnatomy:birnlex_927 ! Principal part of ventral posteromedial nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis

[Term]
id: UBERON:0003025
name: brachium of inferior colliculus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_929-FMA_71114
def: "." [Wikipedia:Brachium_of_inferior_colliculus]
subset: uberon_slim
synonym: "brachium of medial geniculate" EXACT [FMA:71114]
synonym: "inferior brachium" EXACT [FMA:71114]
synonym: "inferior collicular brachium" EXACT [FMA:71114]
synonym: "inferior colliculus brachium" EXACT [FMA:71114]
synonym: "inferior quadrigeminal brachium" EXACT [FMA:71114]
synonym: "peduncle of inferior colliculus" EXACT [FMA:71114]
xref: FMA:71114 ! Brachium of inferior colliculus
xref: NIF_GrossAnatomy:birnlex_929 ! Brachium of inferior colliculus
is_a: UBERON:0002316 ! white matter of neuraxis
relationship: part_of UBERON:0001946 ! inferior colliculus

[Term]
id: UBERON:0003026
name: limitans nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_931-FMA_62220
xref: FMA:62220 ! Limitans nucleus
xref: NIF_GrossAnatomy:birnlex_931 ! Limitans nucleus
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0003027
name: cingulate cortex
alt_id: UBERON:NIF_GrossAnatomy_birnlex_934-MA_0000904
def: "." [Wikipedia:Cingulate_cortex]
subset: uberon_slim
xref: EFO:0000343 ! cingulate cortex
xref: MA:0000904 ! cingulate cortex
xref: NIF_GrossAnatomy:birnlex_934 ! Cingulate cortex
is_a: UBERON:0002619 ! regional part of cerebral cortex
is_a: UBERON:0002791 ! regional part of telencephalon
is_a: UBERON:0003022 ! lobe parts of cerebral cortex
xref: ncithesaurus:Cingulate_Cortex ! Cingulate Cortex
xref: BTO:0003975 ! cingulate cortex

[Term]
id: UBERON:0003028
name: commissure of inferior colliculus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_935-FMA_71115
synonym: "commissure of inferior colliculi" EXACT [FMA:71115]
synonym: "inferior collicular commissure" EXACT [FMA:71115]
synonym: "inferior colliculus commissure" EXACT [FMA:71115]
xref: FMA:71115 ! Commissure of inferior colliculus
xref: NIF_GrossAnatomy:birnlex_935 ! Commissure of inferior colliculus
is_a: UBERON:0001020 ! commissure
intersection_of: UBERON:0001020 ! commissure
intersection_of: part_of UBERON:0001946 ! inferior colliculus
relationship: part_of UBERON:0001946 ! inferior colliculus

[Term]
id: UBERON:0003029
name: stria terminalis
alt_id: UBERON:NIF_GrossAnatomy_birnlex_937-FMA_61974
def: "." [Wikipedia:Stria_terminalis]
subset: uberon_slim
synonym: "semicircular stria" EXACT [FMA:61974]
xref: FMA:61974 ! Stria terminalis
xref: NIF_GrossAnatomy:birnlex_937 ! Stria terminalis
is_a: UBERON:0002316 ! white matter of neuraxis

[Term]
id: UBERON:0003030
name: posterior nucleus of thalamus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_939-FMA_62221
xref: FMA:62221 ! Posterior nucleus of thalamus
xref: NIF_GrossAnatomy:birnlex_939 ! Posterior nucleus of thalamus
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0003031
name: submedial nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_946-FMA_62223
synonym: "gelatinosus thalamic nucleus" EXACT [FMA:62223]
synonym: "submedial nucleus of thalamus" EXACT [FMA:62223]
xref: FMA:62223 ! Submedial nucleus
xref: NIF_GrossAnatomy:birnlex_946 ! Submedial nucleus
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0003032
name: decussation of superior cerebellar peduncle
alt_id: UBERON:NIF_GrossAnatomy_birnlex_951-FMA_72455
def: "." [Wikipedia:Decussation_of_superior_cerebellar_peduncle]
subset: uberon_slim
synonym: "decussation of brachium conjunctivum" EXACT [FMA:72455]
synonym: "decussation of superior cerebellar peduncles" EXACT [FMA:72455]
synonym: "superior cerebellar peduncle decussation" EXACT [FMA:72455]
synonym: "wernekink's decussation" EXACT [FMA:72455]
xref: FMA:72455 ! Decussation of superior cerebellar peduncle
xref: NIF_GrossAnatomy:birnlex_951
is_a: UBERON:0002316 ! white matter of neuraxis
relationship: part_of UBERON:0001943 ! midbrain tegmentum

[Term]
id: UBERON:0003033
name: suprageniculate nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_953-FMA_62222
synonym: "suprageniculate thalamic nucleus" EXACT [FMA:62222]
xref: FMA:62222 ! Suprageniculate nucleus
xref: NIF_GrossAnatomy:birnlex_953 ! Suprageniculate nucleus
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0003034
name: central dorsal nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_956-FMA_62169
xref: FMA:62169 ! Central dorsal nucleus
xref: NIF_GrossAnatomy:birnlex_956 ! Central dorsal nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0003035
name: regional part of cerebellar white matter
alt_id: UBERON:NIF_GrossAnatomy_birnlex_959-FMA_72547
synonym: "segment of cerebellar white matter" EXACT [NIF_GrossAnatomy:birnlex_959]
xref: FMA:72547 ! Segment of cerebellar white matter
xref: NIF_GrossAnatomy:birnlex_959 ! Regional part of cerebellar white matter
is_a: UBERON:0000477 ! anatomical cluster

[Term]
id: UBERON:0003036
name: central lateral nucleus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_961-FMA_62170
synonym: "central lateral nucleus of thalamus" EXACT [FMA:62170]
synonym: "central lateral thalamic nucleus" EXACT [FMA:62170]
synonym: "centrolateral thalamic nucleus" EXACT [FMA:62170]
xref: FMA:62170 ! Central lateral nucleus
xref: NIF_GrossAnatomy:birnlex_961 ! Central lateral nucleus
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0003037
name: septum
alt_id: UBERON:NIF_GrossAnatomy_birnlex_963-FMA_86461
def: "a wall, dividing a cavity or structure into smaller ones[WP]." [Wikipedia:Septum]
xref: FMA:86461 ! Septum
xref: NIF_GrossAnatomy:birnlex_963 ! Septum
xref: OpenCyc:Mx4rrqot_on_EdaAAAACs0uFOQ
is_a: UBERON:0000061 ! anatomical structure

[Term]
id: UBERON:0003038
name: thoracic spinal cord
alt_id: UBERON:NIF_GrossAnatomy_birnlex_966-FMA_71167
def: "." [Wikipedia:Thoracic_spinal_cord]
subset: uberon_slim
synonym: "thoracic region of spinal cord" EXACT [FMA:71167]
synonym: "thoracic segments of spinal cord [1-12]" EXACT [FMA:71167]
synonym: "thoracic spinal cord" EXACT [FMA:71167]
xref: FMA:71167 ! Thoracic segment of spinal cord
xref: NIF_GrossAnatomy:birnlex_966 ! Thoracic spinal cord
is_a: UBERON:0001948 ! regional part of spinal cord
intersection_of: UBERON:0001948 ! regional part of spinal cord
intersection_of: part_of UBERON:0000915 ! thorax
xref: ncithesaurus:Thoracic_Spinal_Cord ! Thoracic Spinal Cord

[Term]
id: UBERON:0003039
name: anterior commissure anterior part
alt_id: UBERON:NIF_GrossAnatomy_birnlex_969-FMA_61963
synonym: "anterior commissure, anterior part" EXACT [FMA:61963]
synonym: "olfactory limb of anterior commissure" EXACT [FMA:61963]
synonym: "olfactory part of anterior commissure" EXACT [FMA:61963]
xref: FMA:61963 ! Anterior part of anterior commissure
xref: NIF_GrossAnatomy:birnlex_969
is_a: UBERON:0002316 ! white matter of neuraxis
relationship: part_of UBERON:0000935 ! anterior commissure

[Term]
id: UBERON:0003040
name: central gray substance of midbrain
alt_id: UBERON:NIF_GrossAnatomy_birnlex_973-FMA_74510
def: "." [Wikipedia:Periaqueductal_gray]
subset: uberon_slim
synonym: "anulus of cerebral aqueduct" EXACT [FMA:74510]
synonym: "central (periaqueductal) gray" EXACT [FMA:74510]
synonym: "periaqueductal gray" EXACT [FMA:74510]
synonym: "periaqueductal gray matter" EXACT [FMA:74510]
synonym: "periaqueductal gray of tegmentum" EXACT [FMA:74510]
synonym: "periaqueductal grey substance" EXACT [FMA:74510]
xref: FMA:74510 ! Central gray substance of midbrain
xref: NIF_GrossAnatomy:birnlex_973 ! Central gray substance of midbrain
is_a: UBERON:0002020 ! gray matter of neuraxis
is_a: UBERON:0002308 ! nucleus of brain

[Term]
id: UBERON:0003041
name: trigeminal nerve fibers
alt_id: UBERON:NIF_GrossAnatomy_birnlex_974-FMA_72501
synonym: "central part of trigeminal nerve" EXACT [FMA:72501]
synonym: "trigeminal nerve fibers" EXACT [FMA:72501]
xref: FMA:72501 ! Trigeminal nerve tract
xref: NIF_GrossAnatomy:birnlex_974 ! Trigeminal nerve fibers
is_a: UBERON:0000064 ! organ part

[Term]
id: UBERON:0003042
name: lateral lemniscus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_976-FMA_72502
def: "." [Wikipedia:Lateral_lemniscus]
subset: uberon_slim
synonym: "lateral fillet" EXACT [FMA:72502]
xref: FMA:72502 ! Lateral lemniscus
xref: NIF_GrossAnatomy:birnlex_976 ! Lateral lemniscus
is_a: UBERON:0002316 ! white matter of neuraxis

[Term]
id: UBERON:0003043
name: posterior part of anterior commissure
alt_id: UBERON:NIF_GrossAnatomy_birnlex_977-FMA_61964
synonym: "anterior commissure, posterior part" EXACT [FMA:61964]
synonym: "temporal limb of anterior commissure" EXACT [FMA:61964]
xref: FMA:61964 ! Posterior part of anterior commissure
xref: NIF_GrossAnatomy:birnlex_977 ! Posterior part of anterior commissure
is_a: UBERON:0002316 ! white matter of neuraxis
relationship: part_of UBERON:0000935 ! anterior commissure

[Term]
id: UBERON:0003044
name: uncinate fasciculus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_983-FMA_77636
def: "." [Wikipedia:Uncinate_fasciculus]
subset: uberon_slim
synonym: "cerebral uncinate fasciculus" EXACT [FMA:77636]
xref: FMA:77636 ! Uncinate fasciculus
xref: NIF_GrossAnatomy:birnlex_983 ! Uncinate fasciculus
is_a: UBERON:0000477 ! anatomical cluster

[Term]
id: UBERON:0003045
name: dorsal longitudinal fasciculus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_986-FMA_83845
def: "." [Wikipedia:Dorsal_longitudinal_fasciculus]
subset: uberon_slim
synonym: "bundle of Schutz" EXACT [FMA:83845]
synonym: "bundle of schutz" EXACT []
synonym: "fasciculus of Schutz" EXACT [FMA:83845]
synonym: "fasciculus of schutz" EXACT []
synonym: "posterior longitudinal fasciculus" EXACT [FMA:83845]
xref: FMA:83845 ! Dorsal longitudinal fasciculus
xref: NIF_GrossAnatomy:birnlex_986 ! Dorsal longitudinal fasciculus
is_a: UBERON:0001019 ! fascicle

[Term]
id: UBERON:0003046
name: ventral acoustic stria
alt_id: UBERON:NIF_GrossAnatomy_birnlex_991-FMA_72498
synonym: "anterior acoustic stria" EXACT [FMA:72498]
xref: FMA:72498 ! Ventral acoustic stria
xref: NIF_GrossAnatomy:birnlex_991 ! Ventral acoustic stria
is_a: UBERON:0002316 ! white matter of neuraxis

[Term]
id: UBERON:0003047
name: regional part of pretectal region
alt_id: UBERON:NIF_GrossAnatomy_birnlex_993-FMA_74519
synonym: "pretectal region segment" EXACT [FMA:74519]
synonym: "segment of pretectal region" EXACT [NIF_GrossAnatomy:birnlex_993]
xref: FMA:74519 ! Segment of pretectal region
xref: NIF_GrossAnatomy:birnlex_993 ! Regional part of pretectal region
is_a: UBERON:0002966 ! regional part of midbrain tectum
intersection_of: UBERON:0002616 ! regional part of brain
intersection_of: part_of UBERON:0001944 ! pretectal region

[Term]
id: UBERON:0003048
name: regional part of hypothalamus
alt_id: UBERON:NIF_GrossAnatomy_birnlex_995-FMA_67706
synonym: "hypothalamus segment" EXACT [FMA:67706]
synonym: "segment of hypothalamus" EXACT [NIF_GrossAnatomy:birnlex_995]
xref: FMA:67706 ! Segment of hypothalamus
xref: NIF_GrossAnatomy:birnlex_995 ! Regional part of hypothalamus
is_a: UBERON:0002784 ! regional part of diencephalon
intersection_of: UBERON:0002616 ! regional part of brain
intersection_of: part_of UBERON:0001898 ! hypothalamus

[Term]
id: UBERON:0003049
name: collagen and cuticulin-based cuticle
alt_id: UBERON:WBbt_0005755
def: "A rigid external coating which is secreted by the hypodermis, seam and some transitional epithelial cells which covers the outer body, the major openings into the body cavity from the exterior, and two large sensory bristles, the male spicules. The cuticle of the spicules, the hook, and of some portions of the spicule channels is especially rigid and is probably sclerotized. Similar sclerotic features are occasionally noted in the ventral surface of the male tail fan. The main structural components of the nematode cuticle are proteins, highly cross-linked collagens and specialised insoluble proteins known as " [UBERON:cjm, WA:dh]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "nematode cuticle" RELATED []
xref: WBbt:0005755 ! cuticle
is_a: UBERON:0001002 ! cuticle

[Term]
id: UBERON:0003050
name: olfactory placode
alt_id: UBERON:XAO_0000005-ZFA_0000048
def: "A thick plate of cells derived from the neural ectoderm in the head region of the embryo that develops into the olfactory region of the nasal cavity." [NLM:olfactory+placode, Wikipedia:Olfactory_placode]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "nasal placode" RELATED []
xref: EHDAA:1504 ! olfactory placode
xref: HOG:0000186 ! olfactory placode
xref: TAO:0000048 ! olfactory placode
xref: XAO:0000005 ! olfactory placode
xref: ZFA:0000048 ! olfactory placode
is_a: UBERON:0002050 ! embryonic structure
relationship: part_of UBERON:0000005 ! chemosensory sensory organ

[Term]
id: UBERON:0003051
name: ear vesicle
alt_id: UBERON:XAO_0000006-ZFA_0000051
def: "Epithelial sac present beside the fifth rhombomere; forms the semicircular canals dorsally and the otolith organs ventrally, and houses the acoustico-vestibular sensory epithelia (maculae) of hair cells. <a href='http://zfin.org/cgi-bin/ZFIN_jump?record=ZDB-PUB-961014-576'>Kimmel et al, 1995.</a> (Also see Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/ear/ear.html'>ear</a> by T. Whitfield.)" [ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
synonym: "otic capsule" RELATED []
synonym: "otic vesicle" RELATED []
synonym: "otocyst" RELATED []
synonym: "ov" RELATED []
xref: XAO:0000006 ! otic vesicle
xref: ZFA:0000051 ! otic vesicle
is_a: UBERON:0002050 ! embryonic structure

[Term]
id: UBERON:0003052
name: midbrain-hindbrain boundary
alt_id: UBERON:XAO_0000016-ZFA_0000042
def: "The part of the brain that is the morphological boundary between the midbrain and hindbrain and that is the location of an organizing center which patterns the midbrain and hindbrain primordia of the neural plate." [GO:0021555]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "isthmus" RELATED []
synonym: "MHB" EXACT []
synonym: "mhb" RELATED []
synonym: "midbrain hindbrain boundary" EXACT []
xref: HOG:0000649 ! midbrain-hindbrain boundary
xref: TAO:0000042 ! midbrain hindbrain boundary
xref: XAO:0000016 ! midbrain-hindbrain boundary
xref: ZFA:0000042 ! midbrain hindbrain boundary
is_a: UBERON:0000015 ! anatomical boundary
relationship: part_of UBERON:0000955 ! brain
relationship: part_of UBERON:0003075 ! neural plate

[Term]
id: UBERON:0003053
name: ventricular zone
alt_id: UBERON:XAO_0000021-ZFA_0001083
comment: This class was created automatically from a combination of ontologies
xref: TAO:0001083 ! ventricular zone
xref: XAO:0000021 ! ventricular zone
xref: ZFA:0001083 ! ventricular zone
is_a: UBERON:0000061 ! anatomical structure
xref: BTO:0003654 ! ventricular zone

[Term]
id: UBERON:0003054
name: roof plate
alt_id: UBERON:XAO_0000022-ZFA_0007058
def: "Organizing center located at the dorsal midline of the neural tube that influences the development of the nervous system, controlling the specification and differentiation of dorsal neuronal cell types[XAO]. a single row of glia at the dorsal midline of the developing neural tube. This region provides inductive signals for the specification of neuronal cell types and of the specification of neural crest cells. The cells comprising the roof plate are the precursors to radial glial cells[GO]. The thin layer of the embryonic neural tube that connects the lateral plates dorsally." [GO:0021509, http://medical-dictionary.thefreedictionary.com/roof+plate, PMID:15378040, Wikipedia:Roof_plate, XAO:0000022]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "alar lamina" RELATED [Wikipedia:Alar_lamina]
synonym: "alar plate" RELATED [Wikipedia:Alar_plate]
synonym: "roofplate" EXACT []
synonym: "spinal cord roof" RELATED [XAO:0000022]
xref: EHDAA:1336 ! roof plate
xref: EHDAA:1350 ! roof plate
xref: EHDAA:1358 ! roof plate
xref: EHDAA:1381 ! roof plate
xref: EHDAA:1391 ! roof plate
xref: EHDAA:1401 ! roof plate
xref: EHDAA:1416 ! roof plate
xref: EHDAA:1431 ! roof plate
xref: EHDAA:1441 ! roof plate
xref: EHDAA:1451 ! roof plate
xref: EHDAA:1965 ! roof plate
xref: EHDAA:1979 ! roof plate
xref: EHDAA:1991 ! roof plate
xref: EHDAA:2013 ! roof plate
xref: EHDAA:2025 ! roof plate
xref: EHDAA:2035 ! roof plate
xref: EHDAA:2047 ! roof plate
xref: EHDAA:2057 ! roof plate
xref: EHDAA:2069 ! roof plate
xref: EHDAA:2081 ! roof plate
xref: EHDAA:2093 ! roof plate
xref: EHDAA:2657 ! roof plate
xref: EHDAA:2669 ! roof plate
xref: EHDAA:2689 ! roof plate
xref: EHDAA:2725 ! roof plate
xref: EHDAA:2737 ! roof plate
xref: EHDAA:2765 ! roof plate
xref: EHDAA:2777 ! roof plate
xref: EHDAA:2789 ! roof plate
xref: EHDAA:2801 ! roof plate
xref: EHDAA:2815 ! roof plate
xref: EHDAA:2829 ! roof plate
xref: EHDAA:2891 ! roof plate
xref: EHDAA:3494 ! roof plate
xref: EHDAA:3512 ! roof plate
xref: EHDAA:3556 ! roof plate
xref: EHDAA:3570 ! roof plate
xref: EHDAA:3572 ! roof plate
xref: EHDAA:3610 ! roof plate
xref: EHDAA:3624 ! roof plate
xref: EHDAA:3638 ! roof plate
xref: EHDAA:3652 ! roof plate
xref: EHDAA:3668 ! roof plate
xref: EHDAA:3684 ! roof plate
xref: EHDAA:3686 ! roof plate
xref: EHDAA:3712 ! roof plate
xref: EHDAA:5524 ! roof plate
xref: EHDAA:5550 ! roof plate
xref: EHDAA:7614 ! roof plate
xref: EHDAA:864 ! roof plate
xref: EHDAA:874 ! roof plate
xref: EHDAA:884 ! roof plate
xref: EHDAA:894 ! roof plate
xref: EHDAA:916 ! roof plate
xref: XAO:0000022 ! roof plate
xref: ZFA:0007058 ! roof plate
is_a: UBERON:0002050 ! embryonic structure
relationship: part_of UBERON:0001017 ! central nervous system

[Term]
id: UBERON:0003055
name: epidermis outer layer
alt_id: UBERON:XAO_0000029-ZFA_0001185
def: "The outermost epidermal layer covering the fish at embryonic stages; derived from the EVL and thought to eventually be replaced by the superficial stratum of the epidermis. Sometimes used synonymously with EVL. <a href='http://zfin.org/cgi-bin/ZFIN_jump?record=ZDB-PUB-040726-12'>Le Guellec et al, 2004.</a>" [ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "epidermis epithelial layer" RELATED []
synonym: "EVL" RELATED []
synonym: "periderm" RELATED []
xref: XAO:0000029 ! epidermis outer layer
xref: ZFA:0001185 ! periderm
is_a: UBERON:0000483 ! epithelium
relationship: part_of UBERON:0000924 ! ectoderm
relationship: part_of UBERON:0001003 ! epidermis

[Term]
id: UBERON:0003056
name: pre-chordal neural plate
alt_id: UBERON:XAO_0000045-ZFA_0007016
def: "The portion of neural plate anterior to the mid-hindbrain junction." [XB:curator]
comment: This class was created automatically from a combination of ontologies
synonym: "anterior neural plate" RELATED []
xref: XAO:0000045 ! pre-chordal neural plate
xref: ZFA:0007016 ! anterior neural plate
is_a: UBERON:0000061 ! anatomical structure
relationship: part_of UBERON:0003075 ! neural plate

[Term]
id: UBERON:0003057
name: chordal neural plate
alt_id: UBERON:XAO_0000046-ZFA_0007017
def: "The portion of neural plate posterior to the mid-hindbrain junction." [XB:curator]
comment: This class was created automatically from a combination of ontologies
synonym: "posterior neural plate" RELATED []
xref: XAO:0000046 ! chordal neural plate
xref: ZFA:0007017 ! posterior neural plate
is_a: UBERON:0002050 ! embryonic structure
relationship: part_of UBERON:0003075 ! neural plate

[Term]
id: UBERON:0003058
name: hypochord
alt_id: UBERON:XAO_0000056-ZFA_0000031
def: "Transient structure that lies immediately ventral to the notochord in the embryo, likely required for the formation of the dorsal aorta. A slight depression marks the future hypochord at NF stage 20 and its segregation from the dorsal endoderm begins at NF stage 24. It progresses from anterior to posterior and is complete by NF stage 28. At NF stage 32 it is present as a dorso-laterally flattened ribbon of yolk-laden cells. It degenerates by apoptosis and by NF stage 43 is no longer detectable as a distinct structure. // A transient rod-like structure which is endodermally derived and located immediately ventral to the notochord. The hypochord is thought to play a role in positioning the dorsal aorta. <a href='http://zfin.org/cgi-bin/ZFIN_jump?record=ZDB-PUB-000621-3'>Eriksson and Lofberg, 2000.</a>" [ISBN:0815318960, PMID:10648245, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "subnotochordal rod" RELATED []
xref: AAO:0000733 ! hypochord
xref: HOG:0000081 ! hypochord
xref: TAO:0000031 ! hypochord
xref: XAO:0000056 ! hypochord
xref: ZFA:0000031 ! hypochord
is_a: UBERON:0000061 ! anatomical structure
relationship: part_of UBERON:0000925 ! endoderm

[Term]
id: UBERON:0003059
name: presomitic mesoderm
alt_id: UBERON:XAO_0000057-ZFA_0000279
def: "Unsegmented field of paraxial mesoderm present posterior to the most recently formed somite pair, from which somites will form. <a href='http://zfin.org/cgi-bin/ZFIN_jump?record=ZDB-PUB-961014-576'>Kimmel et al, 1995.</a>" [ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
synonym: "PSM" RELATED []
synonym: "segmental plate" EXACT []
synonym: "somitogenic mesoderm" RELATED []
xref: HOG:0000559 ! presomitic mesoderm
xref: TAO:0000279 ! segmental plate
xref: XAO:0000057 ! presomitic mesoderm
xref: ZFA:0000279 ! segmental plate
is_a: UBERON:0000061 ! anatomical structure
relationship: develops_from UBERON:0003077 ! paraxial mesoderm
relationship: part_of UBERON:0003077 ! paraxial mesoderm

[Term]
id: UBERON:0003060
name: pronephric duct
alt_id: UBERON:XAO_0000063-ZFA_0000150
def: "Duct of the embryonic kidney, present bilaterally ventral to the somites and leading to the cloacal chamber. <a href='http://zfin.org/cgi-bin/ZFIN_jump?record=ZDB-PUB-961014-576'>Kimmel et al, 1995.</a> Wingert et al have suggested that the pronephric duct as described traditionally may consist of subregions which are analogous to portions of the tubule segment of mammalian and other fish nephrons. <a href='http://zfin.org/cgi-bin/ZFIN_jump?record=ZDB-PUB-071029-9'>Wingert, 2007.</a>" [Wikipedia:Pronephric_duct, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
xref: TAO:0000150 ! pronephric duct
xref: XAO:0000063 ! pronephric duct
xref: ZFA:0000150 ! pronephric duct
is_a: UBERON:0000058 ! duct
relationship: part_of UBERON:0002120 ! pronephros
xref: ncithesaurus:Pronephric_Duct ! Pronephric Duct

[Term]
id: UBERON:0003061
name: blood island
alt_id: UBERON:XAO_0000067-ZFA_0000094
def: "Region located on the ventral surface of the developing embryo that is a site of hematopoiesis and that is analogous to the yolk sac blood islands of higher vertebrates. // Nests of developing blood cells arising late in the segmentation period from the intermediate mass, and located in the anterior-ventral tail, just posterior to the yolk extension. <a href='http://zfin.org/cgi-bin/ZFIN_jump?record=ZDB-PUB-961014-576'>Kimmel et al, 1995.</a>" [PMID:9618755, Wikipedia:Blood_island, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "blood islands" RELATED []
synonym: "caudal hematopoietic tissue" RELATED []
synonym: "posterior blood island" RELATED []
synonym: "posterior ICM" RELATED []
synonym: "VBI" RELATED []
synonym: "ventral blood island" RELATED []
synonym: "ventral lateral plate mesoderm" BROAD []
xref: EHDAA:170 ! blood island
xref: EHDAA:207 ! blood island
xref: HOG:0000085 ! blood island
xref: TAO:0000094 ! blood island
xref: XAO:0000067 ! blood island
xref: ZFA:0000094 ! blood island
is_a: UBERON:0000061 ! anatomical structure
relationship: develops_from UBERON:0003081 ! lateral plate mesoderm
relationship: part_of UBERON:0002390 ! hematopoietic system
xref: ncithesaurus:Blood_Island ! Blood Island

[Term]
id: UBERON:0003062
name: dorsal marginal zone
alt_id: UBERON:XAO_0000072-ZFA_0000071
def: "." [Wikipedia:Regional_specification#Dorsal.2Fventral_axis_.26_organizer]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "organizer" RELATED []
synonym: "shield" EXACT []
synonym: "Spemann Mangold organizer" RELATED []
synonym: "Spemann's organizer" RELATED []
xref: TAO:0000071 ! shield
xref: XAO:0000072 ! dorsal marginal zone
xref: ZFA:0000071 ! shield
is_a: UBERON:0000061 ! anatomical structure
relationship: part_of UBERON:0002541 ! germ ring

[Term]
id: UBERON:0003063
name: prechordal plate
alt_id: UBERON:XAO_0000079-ZFA_0000060
def: "Axial hypoblast located anterior to the chorda mesoderm; the polster is its most anterior region. <a href='http://zfin.org/cgi-bin/ZFIN_jump?record=ZDB-PUB-961014-576'>Kimmel et al, 1995.</a>" [ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "head mesenchyme" BROAD []
synonym: "head mesoderm" BROAD []
xref: EHDAA:181 ! prechordal plate
xref: HOG:0000086 ! prechordal plate
xref: TAO:0000060 ! prechordal plate
xref: XAO:0000079 ! prechordal plate
xref: ZFA:0000060 ! prechordal plate
is_a: UBERON:0000061 ! anatomical structure
relationship: part_of UBERON:0003068 ! axial mesoderm

[Term]
id: UBERON:0003064
name: intermediate mesoderm
alt_id: UBERON:XAO_0000085-ZFA_0001206
def: "The intermediate mesoderm is located between the lateral mesoderm and the paraxial mesoderm. It develops into the kidney and gonads." [GOC:curators, Wikipedia:Intermediate_mesoderm]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "IM" RELATED []
xref: HOG:0000087 ! intermediate mesoderm
xref: TAO:0001206 ! intermediate mesoderm
xref: XAO:0000085 ! intermediate mesoderm
xref: ZFA:0001206 ! intermediate mesoderm
is_a: UBERON:0000061 ! anatomical structure
relationship: adjacent_to UBERON:0003077 ! paraxial mesoderm
relationship: adjacent_to UBERON:0003081 ! lateral plate mesoderm
relationship: develops_from UBERON:0000926 ! mesoderm
relationship: part_of UBERON:0000926 ! mesoderm
xref: ncithesaurus:Intermediate_Mesoderm ! Intermediate Mesoderm

[Term]
id: UBERON:0003065
name: ciliary marginal zone
alt_id: UBERON:XAO_0000086-ZFA_0001289
def: "Region at the periphery of the retina where retinal stem cells are located. After 60 hpf, the CMZ is the source of most retinal growth. <a href='http://zfin.org/cgi-bin/ZFIN_jump?record=ZDB-PUB-050427-5'>Wehman et al, 2005.</a>" [ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "circumferential germinal zone" RELATED []
synonym: "CMZ" RELATED []
xref: HOG:0000088 ! ciliary marginal zone
xref: TAO:0001289 ! ciliary marginal zone
xref: XAO:0000086 ! ciliary marginal zone
xref: ZFA:0001289 ! ciliary marginal zone
is_a: UBERON:0000061 ! anatomical structure
relationship: part_of UBERON:0000966 ! retina

[Term]
id: UBERON:0003066
name: hyoid arch
alt_id: UBERON:XAO_0000098-ZFA_0001276
def: "." [Wikipedia:Hyoid_arch]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "hyoid bars" RELATED []
synonym: "pharyngeal arch 2 skeleton" EXACT []
synonym: "second visceral arch" RELATED []
synonym: "ventral visceral arch 2" RELATED []
synonym: "visceral arch 2" RELATED []
xref: TAO:0001276 ! hyoid arch
xref: XAO:0000098 ! hyoid arch
xref: ZFA:0001276 ! pharyngeal arch 2 skeleton
is_a: UBERON:0002539 ! pharyngeal arch

[Term]
id: UBERON:0003067
name: dorsolateral placode
alt_id: UBERON:XAO_0000187-ZFA_0001310
comment: This class was created automatically from a combination of ontologies
synonym: "dorsolateral placodes" RELATED []
xref: HOG:0000103 ! dorsolateral placode
xref: TAO:0001310 ! dorsolateral placode
xref: XAO:0000187 ! dorsolateral placode
xref: ZFA:0001310 ! dorsolateral placode
is_a: UBERON:0002050 ! embryonic structure

[Term]
id: UBERON:0003068
name: axial mesoderm
alt_id: UBERON:XAO_0000205-ZFA_0001204
def: "The axial mesoderm includes the prechordal mesoderm and the chordamesoderm. It gives rise to the prechordal plate and to the notochord." []
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
xref: HOG:0000107 ! axial mesoderm
xref: TAO:0001204 ! axial mesoderm
xref: XAO:0000205 ! axial mesoderm
xref: ZFA:0001204 ! axial mesoderm
is_a: UBERON:0002050 ! embryonic structure
relationship: develops_from UBERON:0000926 ! mesoderm
relationship: part_of UBERON:0000926 ! mesoderm

[Term]
id: UBERON:0003069
name: otic placode
alt_id: UBERON:XAO_0000223-ZFA_0000138
def: "Invagination of thickened epithelium near the hindbrain that gives rise to a spherically shaped ear vesicle. // Primordium of the ear epithelium before it hollows into the otic vesicle, present beside the hindbrain rudiment in the midsegmentation period. <a href='http://zfin.org/cgi-bin/ZFIN_jump?record=ZDB-PUB-961014-576'>Kimmel et al, 1995.</a> (Also see Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/ear/ear.html'>ear</a> by T. Whitfield.)" [PMID:16217737, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "auditory placode" RELATED []
synonym: "otic capsule" RELATED []
synonym: "otocyst" RELATED []
xref: EHDAA:506 ! otic placode
xref: HOG:0000235 ! otic placode
xref: TAO:0000138 ! otic placode
xref: XAO:0000223 ! otic placode
xref: ZFA:0000138 ! otic placode
is_a: UBERON:0003067 ! dorsolateral placode
relationship: part_of UBERON:0001690 ! ear
xref: ncithesaurus:Otic_Placodes ! Otic Placodes

[Term]
id: UBERON:0003070
name: trigeminal placode
alt_id: UBERON:XAO_0000225-ZFA_0000162
def: "The ectodermal rudiment of the trigeminal ganglion, distinguishable during much of the segmentation period. <a href='http://zfin.org/cgi-bin/ZFIN_jump?record=ZDB-PUB-961014-576'>Kimmel et al, 1995.</a>" [ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
xref: HOG:0000109 ! trigeminal placode
xref: TAO:0000162 ! trigeminal placode
xref: XAO:0000225 ! trigeminal placode
xref: ZFA:0000162 ! trigeminal placode
is_a: UBERON:0003067 ! dorsolateral placode
relationship: develops_from UBERON:0003067 ! dorsolateral placode

[Term]
id: UBERON:0003071
name: eye primordium
alt_id: UBERON:XAO_0000227-ZFA_0000570
def: "First trace of the future visual apparatus. The eye primordia forming antero-lateral evaginations of the closing neural tube are originally massive formations into which only a slit-shaped extension of the neural groove penetrates at NF stage 18. At NF stage 19 they clearly segregate from the anterior portion of the neural tube." [ISBN:0815318960]
comment: This class was created automatically from a combination of ontologies
synonym: "eye anlage" RELATED []
synonym: "eye field" RELATED []
synonym: "optic primordium" EXACT []
xref: TAO:0000570 ! optic primordium
xref: XAO:0000227 ! eye primordium
xref: ZFA:0000570 ! optic primordium
is_a: UBERON:0001048 ! primordium
intersection_of: UBERON:0001048 ! primordium
intersection_of: develops_into UBERON:0000970 ! eye
relationship: develops_from UBERON:0003056 ! pre-chordal neural plate

[Term]
id: UBERON:0003072
name: eye vesicle
alt_id: UBERON:XAO_0000228-ZFA_0001202
comment: This class was created automatically from a combination of ontologies
synonym: "eye cup" RELATED []
synonym: "optic cup" RELATED []
xref: XAO:0000228 ! eye vesicle
xref: ZFA:0001202 ! optic cup
is_a: UBERON:0000481 ! multi-tissue structure
relationship: develops_from UBERON:0003071 ! eye primordium
relationship: part_of UBERON:0000970 ! eye

[Term]
id: UBERON:0003073
name: lens placode
alt_id: UBERON:XAO_0000240-ZFA_0000122
def: "Ectodermal primordium of the lens of the eye. <a href='http://zfin.org/cgi-bin/ZFIN_jump?record=ZDB-PUB-961014-576'>Kimmel et al, 1995.</a>" [Wikipedia:Lens_placode, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
xref: EHDAA:2908 ! lens placode
xref: HOG:0000166 ! lens placode
xref: TAO:0000122 ! lens placode
xref: XAO:0000240 ! lens placode
xref: ZFA:0000122 ! lens placode
intersection_of: UBERON:0001048 ! primordium
intersection_of: develops_into UBERON:0000965 ! lens
relationship: part_of UBERON:0000076 ! external ectoderm
xref: ncithesaurus:Lens_Placodes ! Lens Placodes

[Term]
id: UBERON:0003074
name: mesonephric duct
alt_id: UBERON:XAO_0000242-ZFA_0000546
def: "Paired organ that connects the primitive kidney Wolffian body (or mesonephros) to the cloaca and serves as the anlage for certain male reproductive organs. the Wolffian duct is what remains of the pronephric duct after the atrophy of the pronephros. -- wikipedia" [Wikipedia:Mesonephric_duct, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "nephric duct" RELATED []
synonym: "renal duct" RELATED []
synonym: "Wolffian duct" RELATED [Wikipedia:Wolffian_duct]
synonym: "Leydig's duct" RELATED [Wikipedia:Wolffian_duct]
synonym: "archinephric duct" RELATED [Wikipedia:Wolffian_duct]
xref: EMAPA:16577 ! nephric duct
xref: TAO:0000546 ! mesonephric duct
xref: XAO:0000242 ! mesonephric duct
xref: ZFA:0000546 ! mesonephric duct
is_a: UBERON:0000058 ! duct
relationship: develops_from UBERON:0003060 ! pronephric duct
relationship: part_of UBERON:0000080 ! mesonephros
xref: ncithesaurus:Mesonephric_Duct ! Mesonephric Duct

[Term]
id: UBERON:0003075
name: neural plate
alt_id: UBERON:XAO_0000249-ZFA_0000132
def: "A region of embryonic ectodermal cells that lie directly above the notochord. During neurulation, they change shape and produce an infolding of the neural plate (the neural fold) that then seals to form the neural tube. At NF stage 11.5 is the first indication of neural plate within the sensorial layer of ectoderm. It extends to near the animal pole by NF stage 12.5 and the entire plate is faintly delimited by NF stage 13. // The earliest recognizable dorsal ectodermal primordium of the central nervous system present near the end of gastrulation before infolding to form the neural keel; consists of a thickened pseudostratified epithelium. <a href='http://zfin.org/cgi-bin/ZFIN_jump?record=ZDB-PUB-961014-576'>Kimmel et al, 1995.</a>" [ISBN:0815318960, OMD:neural+plate, Wikipedia:Neural_plate, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "presumptive central nervous system" RELATED []
xref: EHDAA:346 ! neural plate
xref: EHDAA:902 ! neural plate
xref: HOG:0000068 ! neural plate
xref: TAO:0000132 ! neural plate
xref: XAO:0000249 ! neural plate
xref: ZFA:0000132 ! neural plate
is_a: UBERON:0002050 ! embryonic structure
relationship: develops_from UBERON:0002346 ! neural ectoderm
xref: ncithesaurus:Neural_Plate ! Neural Plate
xref: BTO:0001765 ! neural plate

[Term]
id: UBERON:0003076
name: posterior neural tube
alt_id: UBERON:XAO_0000250-ZFA_0007037
comment: This class was created automatically from a combination of ontologies
xref: HOG:0001383 ! posterior neural tube
xref: TAO:0007037 ! posterior neural tube
xref: XAO:0000250 ! posterior neural tube
xref: ZFA:0007037 ! posterior neural tube
is_a: UBERON:0000061 ! anatomical structure
is_a: UBERON:0002050 ! embryonic structure
relationship: develops_from UBERON:0003057 ! chordal neural plate
relationship: part_of UBERON:0001049 ! neural tube

[Term]
id: UBERON:0003077
name: paraxial mesoderm
alt_id: UBERON:XAO_0000259-ZFA_0000255
def: "Area of mesoderm at either side of the midline embryonic notochord that, on segmentation, forms the paired somites. // Mesoderm which is lateral to the neural tube on both sides. //GO: The paraxial mesoderm is the mesoderm located bilaterally adjacent to the notochord and neural tube" [OMD:paraxial+mesoderm, Wikipedia:Paraxial_mesoderm, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "paraxial mesenchyme" RELATED []
xref: HOG:0000114 ! paraxial mesoderm
xref: TAO:0000255 ! paraxial mesoderm
xref: XAO:0000259 ! paraxial mesoderm
xref: ZFA:0000255 ! paraxial mesoderm
is_a: UBERON:0003104 ! mesenchyme
relationship: part_of UBERON:0000926 ! mesoderm
xref: ncithesaurus:Paraxial_Mesoderm ! Paraxial Mesoderm

[Term]
id: UBERON:0003078
name: epibranchial placode
alt_id: UBERON:XAO_0000284-ZFA_0001294
comment: This class was created automatically from a combination of ontologies
synonym: "epibranchial placodes" RELATED []
xref: HOG:0000117 ! epibranchial placode
xref: TAO:0001294 ! epibranchial placode
xref: XAO:0000284 ! epibranchial placode
xref: ZFA:0001294 ! epibranchial placode
is_a: UBERON:0002050 ! embryonic structure
relationship: develops_from UBERON:0003067 ! dorsolateral placode
relationship: part_of UBERON:0000010 ! peripheral nervous system

[Term]
id: UBERON:0003079
name: floor plate
alt_id: UBERON:XAO_0000306-ZFA_0000022
def: "Organizing center consisting of a small group of cells located at the ventral midline of the neural tube that influences the development of the nervous system, governing the specification of neuronal cell types and directing axonal trajectories[]. a neural tube structure that separates the left and right components of the basal plate. Derived from the notochord during neurulation, it is a ventralizing structure, secreting and aiding in the development of the dorsal-ventral axis of the brainstem and spinal cord[WP]." [GO:0021508, PMID:15738958, Wikipedia:Floor_plate]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "flexural organ" RELATED []
synonym: "floorplate" EXACT []
synonym: "fp" RELATED []
synonym: "spinal cord floor" RELATED []
xref: EHDAA:1375 ! floor plate
xref: EHDAA:1385 ! floor plate
xref: EHDAA:1395 ! floor plate
xref: EHDAA:1410 ! floor plate
xref: EHDAA:1425 ! floor plate
xref: EHDAA:1435 ! floor plate
xref: EHDAA:1445 ! floor plate
xref: EHDAA:1955 ! floor plate
xref: EHDAA:1975 ! floor plate
xref: EHDAA:1985 ! floor plate
xref: EHDAA:2005 ! floor plate
xref: EHDAA:2017 ! floor plate
xref: EHDAA:2029 ! floor plate
xref: EHDAA:2039 ! floor plate
xref: EHDAA:2051 ! floor plate
xref: EHDAA:2061 ! floor plate
xref: EHDAA:2073 ! floor plate
xref: EHDAA:2085 ! floor plate
xref: EHDAA:2651 ! floor plate
xref: EHDAA:2663 ! floor plate
xref: EHDAA:2675 ! floor plate
xref: EHDAA:2717 ! floor plate
xref: EHDAA:2729 ! floor plate
xref: EHDAA:2757 ! floor plate
xref: EHDAA:2769 ! floor plate
xref: EHDAA:2781 ! floor plate
xref: EHDAA:2793 ! floor plate
xref: EHDAA:2805 ! floor plate
xref: EHDAA:2819 ! floor plate
xref: EHDAA:2871 ! floor plate
xref: EHDAA:304 ! floor plate
xref: EHDAA:312 ! floor plate
xref: EHDAA:320 ! floor plate
xref: EHDAA:328 ! floor plate
xref: EHDAA:334 ! floor plate
xref: EHDAA:340 ! floor plate
xref: EHDAA:3480 ! floor plate
xref: EHDAA:3498 ! floor plate
xref: EHDAA:3520 ! floor plate
xref: EHDAA:3546 ! floor plate
xref: EHDAA:3560 ! floor plate
xref: EHDAA:3576 ! floor plate
xref: EHDAA:3600 ! floor plate
xref: EHDAA:3614 ! floor plate
xref: EHDAA:3628 ! floor plate
xref: EHDAA:3642 ! floor plate
xref: EHDAA:3656 ! floor plate
xref: EHDAA:3672 ! floor plate
xref: EHDAA:3698 ! floor plate
xref: EHDAA:5500 ! floor plate
xref: EHDAA:5528 ! floor plate
xref: EHDAA:7590 ! floor plate
xref: EHDAA:834 ! floor plate
xref: EHDAA:842 ! floor plate
xref: EHDAA:846 ! floor plate
xref: EHDAA:858 ! floor plate
xref: EHDAA:868 ! floor plate
xref: EHDAA:878 ! floor plate
xref: EHDAA:888 ! floor plate
xref: EHDAA:910 ! floor plate
xref: TAO:0000022 ! floor plate
xref: XAO:0000306 ! floor plate
xref: ZFA:0000022 ! floor plate
is_a: UBERON:0002050 ! embryonic structure
relationship: part_of UBERON:0001017 ! central nervous system
xref: BTO:0001720 ! floor plate

[Term]
id: UBERON:0003080
name: anterior neural tube
alt_id: UBERON:XAO_0000307-ZFA_0007038
comment: This class was created automatically from a combination of ontologies
xref: HOG:0001384 ! anterior neural tube
xref: TAO:0007038 ! anterior neural tube
xref: XAO:0000307 ! anterior neural tube
xref: ZFA:0007038 ! anterior neural tube
is_a: UBERON:0002050 ! embryonic structure
relationship: develops_from UBERON:0003056 ! pre-chordal neural plate
relationship: part_of UBERON:0001049 ! neural tube

[Term]
id: UBERON:0003081
name: lateral plate mesoderm
alt_id: UBERON:XAO_0000311-ZFA_0000121
def: "." [Wikipedia:Lateral_plate_mesoderm]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "lateral mesoderm" EXACT []
synonym: "lateral plate" RELATED []
xref: HOG:0000118 ! lateral plate mesoderm
xref: TAO:0000121 ! lateral plate mesoderm
xref: TAO:0001065 ! lateral mesoderm
xref: XAO:0000311 ! lateral plate mesoderm
xref: ZFA:0000121 ! lateral plate mesoderm
is_a: UBERON:0000061 ! anatomical structure
relationship: develops_from UBERON:0000926 ! mesoderm
relationship: part_of UBERON:0000926 ! mesoderm
xref: ncithesaurus:Lateral_Mesoderm ! Lateral Mesoderm

[Term]
id: UBERON:0003082
name: myotome
alt_id: UBERON:XAO_0000315-ZFA_0001056
def: "A group of tissues formed from somites that develop into the body wall muscle[WP]. Somitic compartment that is a precursor of muscle. // Portion of the somites giving rise to body wall muscle masses. <a href='http://zfin.org/cgi-bin/ZFIN_jump?record=ZDB-PUB-961014-576'>Kimmel et al, 1995.</a>" [PMID:17313522, Wikipedia:Myotome, ZFIN:curator]
comment: The term "myotome" is also used to describe the muscles served by a single nerve root
subset: uberon_slim
synonym: "myomeres" RELATED []
synonym: "myotomes" RELATED []
xref: BTO:0000742
xref: EHDAA:1721 ! myotome
xref: EHDAA:1727 ! myotome
xref: EHDAA:1733 ! myotome
xref: EHDAA:1739 ! myotome
xref: HOG:0001244 ! myotome
xref: TAO:0001056 ! myotome
xref: XAO:0000315 ! myotome
xref: ZFA:0001056 ! myotome
is_a: UBERON:0001630 ! muscle organ
relationship: develops_from UBERON:0002329 ! somite
relationship: part_of UBERON:0002329 ! somite

[Term]
id: UBERON:0003083
name: trunk neural crest
alt_id: UBERON:XAO_0000319-ZFA_0001024
def: "Trunk portion of the neural crest. The trunk neural crest lies between the vagal and sacral neural crest and gives rise to two groups of cells. One group migrates dorsolateral and populates the skin, forming pigment cells and the other migrates ventrolateral through the anterior sclerotome to become the epinephrine-producing cells of the adrenal gland and the neurons of the sympathetic nervous system. Some cells remain in the sclerotome to form the dorsal root ganglia [Wikipedia]." [ISBN:0815318960, Wikipedia:Trunk_neural_crest]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "trunk crest" RELATED []
xref: HOG:0000062 ! trunk neural crest
xref: TAO:0001024 ! trunk neural crest
xref: XAO:0000319 ! trunk neural crest
xref: ZFA:0001024 ! trunk neural crest
is_a: UBERON:0000479 ! portion of tissue
relationship: part_of UBERON:0002342 ! neural crest

[Term]
id: UBERON:0003084
name: fused heart primordium
alt_id: UBERON:XAO_0000336-ZFA_0000028
def: "Bilateral groups of cells consisting of three rows: one row of endocardial precursors medially and two rows of myocardical precursors laterally. The two populations fuse at the midline between 21 and 26 somites to form the heart rudiment or cone. <a href='http://zfin.org/cgi-bin/ZFIN_jump?record=ZDB-PUB-010219-2'>Stainier 2001.</a>" [ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "heart primordium" RELATED []
xref: XAO:0000336 ! fused heart primordium
xref: ZFA:0000028 ! heart primordium
is_a: UBERON:0001048 ! primordium
relationship: part_of UBERON:0001009 ! circulatory system

[Term]
id: UBERON:0003085
name: ventral aorta
alt_id: UBERON:XAO_0000338-ZFA_0000604
def: "Outflow artery from the heart to the aortic arches. <a href='http://zfin.org/cgi-bin/ZFIN_jump?record=ZDB-PUB-961014-576'>Kimmel et al, 1995.</a>" [ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
xref: HOG:0000121 ! ventral aorta
xref: TAO:0000604 ! ventral aorta
xref: XAO:0000338 ! ventral aorta
xref: ZFA:0000604 ! ventral aorta
is_a: UBERON:0000947 ! aorta

[Term]
id: UBERON:0003086
name: caudal artery
alt_id: UBERON:XAO_0000364-ZFA_0000011
def: "Extension of the dorsal aorta in the tail. <a href='http://zfin.org/cgi-bin/ZFIN_jump?record=ZDB-PUB-961014-576'>Kimmel et al, 1995.</a>" [Wikipedia:Caudal_artery, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "CA" RELATED []
xref: HOG:0000123 ! caudal artery
xref: TAO:0000011 ! caudal artery
xref: XAO:0000364 ! caudal artery
xref: ZFA:0000011 ! caudal artery
is_a: UBERON:0001637 ! artery

[Term]
id: UBERON:0003087
name: anterior cardinal vein
alt_id: UBERON:XAO_0000383-ZFA_0000423
comment: This class was created automatically from a combination of ontologies
synonym: "ACV" RELATED []
synonym: "rostral cardinal veins" RELATED []
xref: HOG:0000113 ! anterior cardinal vein
xref: TAO:0000423 ! anterior cardinal vein
xref: XAO:0000383 ! anterior cardinal vein
xref: ZFA:0000423 ! anterior cardinal vein
is_a: UBERON:0001638 ! vein
xref: ncithesaurus:Anterior_Cardinal_Vein ! Anterior Cardinal Vein

[Term]
id: UBERON:0003088
name: caudal vein
alt_id: UBERON:XAO_0000390-ZFA_0000180
def: "Vein in the tail returning blood from the trunk and tail to the heart, leads directly into the posterial cardinal vein in the posterior trunk. <a href='http://zfin.org/cgi-bin/ZFIN_jump?record=ZDB-PUB-961014-576'>Kimmel et al, 1995.</a>" [ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "CV" RELATED []
xref: HOG:0000126 ! caudal vein
xref: TAO:0000180 ! caudal vein
xref: XAO:0000390 ! caudal vein
xref: ZFA:0000180 ! caudal vein
is_a: UBERON:0001638 ! vein

[Term]
id: UBERON:0003089
name: sclerotome
alt_id: UBERON:XAO_0000397-ZFA_0001080
def: "Somitic compartment that is a precursor of the axial skeleton." [Wikipedia:Sclerotome, XB:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "sclerotomes" RELATED []
xref: EHDAA:1193 ! sclerotome
xref: EHDAA:1199 ! sclerotome
xref: EHDAA:1205 ! sclerotome
xref: EHDAA:1211 ! sclerotome
xref: EHDAA:1217 ! sclerotome
xref: EHDAA:1223 ! sclerotome
xref: EHDAA:1229 ! sclerotome
xref: EHDAA:1235 ! sclerotome
xref: EHDAA:1807 ! sclerotome
xref: EHDAA:1813 ! sclerotome
xref: EHDAA:1819 ! sclerotome
xref: EHDAA:1825 ! sclerotome
xref: EHDAA:1831 ! sclerotome
xref: EHDAA:1837 ! sclerotome
xref: EHDAA:1843 ! sclerotome
xref: EHDAA:1849 ! sclerotome
xref: EHDAA:1855 ! sclerotome
xref: EHDAA:2477 ! sclerotome
xref: EHDAA:2483 ! sclerotome
xref: EHDAA:2489 ! sclerotome
xref: EHDAA:2495 ! sclerotome
xref: EHDAA:2501 ! sclerotome
xref: EHDAA:2507 ! sclerotome
xref: EHDAA:2513 ! sclerotome
xref: EHDAA:2519 ! sclerotome
xref: EHDAA:2525 ! sclerotome
xref: EHDAA:2531 ! sclerotome
xref: EHDAA:674 ! sclerotome
xref: EHDAA:677 ! sclerotome
xref: EHDAA:680 ! sclerotome
xref: EHDAA:684 ! sclerotome
xref: EHDAA:703 ! sclerotome
xref: EHDAA:707 ! sclerotome
xref: EHDAA:711 ! sclerotome
xref: EHDAA:715 ! sclerotome
xref: EHDAA:719 ! sclerotome
xref: EHDAA:723 ! sclerotome
xref: EHDAA:727 ! sclerotome
xref: EHDAA:731 ! sclerotome
xref: HOG:0000680 ! sclerotome
xref: TAO:0001080 ! sclerotome
xref: XAO:0000397 ! sclerotome
xref: ZFA:0001080 ! sclerotome
is_a: UBERON:0000061 ! anatomical structure
relationship: develops_from UBERON:0002329 ! somite
relationship: part_of UBERON:0002329 ! somite
xref: ncithesaurus:Sclerotome ! Sclerotome

[Term]
id: UBERON:0003090
name: supraorbital lateral line
alt_id: UBERON:XAO_0000442-ZFA_0000443
def: "One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.)" [ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
xref: HOG:0000128 ! supraorbital lateral line
xref: TAO:0000443 ! supraorbital lateral line
xref: XAO:0000442 ! supraorbital lateral line
xref: ZFA:0000443 ! supraorbital lateral line
is_a: UBERON:0000061 ! anatomical structure
relationship: part_of UBERON:0002540 ! lateral line system

[Term]
id: UBERON:0003091
name: thyroid primordium
alt_id: UBERON:XAO_0000444-ZFA_0001081
comment: This class was created automatically from a combination of ontologies
xref: TAO:0001081 ! thyroid primordium
xref: XAO:0000444 ! thyroid primordium
xref: ZFA:0001081 ! thyroid primordium
is_a: UBERON:0001048 ! primordium
relationship: develops_from UBERON:0001731 ! cavity of pharynx
relationship: part_of UBERON:0000949 ! endocrine system
xref: ncithesaurus:Thyroid_Primordium ! Thyroid Primordium

[Term]
id: UBERON:0003092
name: ultimobranchial body
alt_id: UBERON:XAO_0000452-ZFA_0001448
def: "." [Wikipedia:Ultimobranchial_body]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
xref: EHDAA:2987 ! ultimobranchial body
xref: EHDAA:9139 ! ultimobranchial body
xref: GAID:1246 ! ultimobranchial body
xref: HOG:0001185 ! ultimobranchial body
xref: TAO:0001448 ! ultimobranchial body
xref: XAO:0000452 ! ultimobranchial body
xref: ZFA:0001448 ! ultimobranchial body
is_a: UBERON:0000061 ! anatomical structure
relationship: develops_from UBERON:0003117 ! pharyngeal arch 6
relationship: part_of UBERON:0000949 ! endocrine system

[Term]
id: UBERON:0003093
name: occipital lateral line
alt_id: UBERON:XAO_0000458-ZFA_0000400
def: "One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.)" [ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "supratemporal lateral line" RELATED []
xref: HOG:0000131 ! occipital lateral line
xref: TAO:0000400 ! occipital lateral line
xref: XAO:0000458 ! occipital lateral line
xref: ZFA:0000400 ! occipital lateral line
is_a: UBERON:0000061 ! anatomical structure
relationship: part_of UBERON:0002540 ! lateral line system

[Term]
id: UBERON:0003094
name: infraorbital lateral line
alt_id: UBERON:XAO_0000459-ZFA_0000524
def: "One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.)" [ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
xref: HOG:0000132 ! infraorbital lateral line
xref: TAO:0000524 ! infraorbital lateral line
xref: XAO:0000459 ! infraorbital lateral line
xref: ZFA:0000524 ! infraorbital lateral line
is_a: UBERON:0000061 ! anatomical structure
relationship: part_of UBERON:0002540 ! lateral line system

[Term]
id: UBERON:0003095
name: dorsal lateral line
alt_id: UBERON:XAO_0000462-ZFA_0005112
def: "One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.)" [ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
xref: TAO:0005112 ! dorsal lateral line
xref: XAO:0000462 ! dorsal lateral line
xref: ZFA:0005112 ! dorsal lateral line
is_a: UBERON:0000061 ! anatomical structure
relationship: part_of UBERON:0002540 ! lateral line system

[Term]
id: UBERON:0003096
name: middle lateral line
alt_id: UBERON:XAO_0000463-ZFA_0000344
def: "One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.)" [ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
xref: HOG:0000133 ! middle lateral line
xref: TAO:0000344 ! middle lateral line
xref: XAO:0000463 ! middle lateral line
xref: ZFA:0000344 ! middle lateral line
is_a: UBERON:0000061 ! anatomical structure
relationship: part_of UBERON:0002540 ! lateral line system

[Term]
id: UBERON:0003097
name: dorsal fin
alt_id: UBERON:XAO_0000469-ZFA_0001173
def: "." [Wikipedia:Dorsal_fin]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
xref: OpenCyc:Mx4rvVjbzZwpEbGdrcN5Y29ycA
xref: TAO:0001173 ! dorsal fin
xref: XAO:0000469 ! dorsal fin
xref: ZFA:0001173 ! dorsal fin
is_a: UBERON:0002534 ! fin
relationship: develops_from UBERON:0003083 ! trunk neural crest

[Term]
id: UBERON:0003098
name: optic stalk
alt_id: UBERON:XAO_0000475-ZFA_0000137
def: "." [Wikipedia:Optic_stalk]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
xref: EHDAA:3816 ! optic stalk
xref: HOG:0000223 ! optic stalk
xref: TAO:0000137 ! optic stalk
xref: XAO:0000475 ! optic stalk
xref: ZFA:0000137 ! optic stalk
is_a: UBERON:0000061 ! anatomical structure
relationship: develops_from UBERON:0003072 ! eye vesicle
relationship: part_of UBERON:0001894 ! diencephalon
xref: ncithesaurus:Optic_Stalk ! Optic Stalk

[Term]
id: UBERON:0003099
name: cranial neural crest
alt_id: UBERON:XAO_0001001-ZFA_0001194
def: "Neural crest that is part of the head [ZFA].The cranial neural crest arises in the anterior and populates the face and the pharyngeal arches giving rise to bones, cartilage, nerves and connective tissue [Wikipedia]." [Wikipedia:Cranial_neural_crest, ZFA:0001194, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "head crest" RELATED []
xref: HOG:0000063 ! cranial neural crest
xref: TAO:0001194 ! cranial neural crest
xref: XAO:0001001 ! cranial neural crest
xref: ZFA:0001194 ! cranial neural crest
is_a: UBERON:0000479 ! portion of tissue
relationship: part_of UBERON:0002342 ! neural crest

[Term]
id: UBERON:0003100
name: female organism
alt_id: UBERON:XAO_0003005-ZFA_0000303
def: "Gonochoristic organism that can produce female gametes. // Gonochoristic organism that can produce female gametes." [CARO:0000028, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
xref: BILA:0000028
xref: CARO:0000028 ! female organism
xref: FBbt:00007011 ! female organism
xref: HAO:0000028 ! female organism
xref: TAO:0000303 ! female
xref: XAO:0003005 ! female organism
xref: ZFA:0000303 ! female organism
is_a: UBERON:0000468 ! multi-cellular organism
disjoint_from: UBERON:0003101 ! male organism

[Term]
id: UBERON:0003101
name: male organism
alt_id: UBERON:XAO_0003006-ZFA_0000242
def: "Gonochoristic organism that can produce male gametes. // Gonochoristic organism that can produce male gametes." [CARO:0000027, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
xref: BILA:0000027
xref: CARO:0000027 ! male organism
xref: FBbt:00007004 ! male organism
xref: HAO:0000027 ! male organism
xref: TAO:0000242 ! male
xref: XAO:0003006 ! male organism
xref: ZFA:0000242 ! male organism
is_a: UBERON:0000468 ! multi-cellular organism

[Term]
id: UBERON:0003102
name: surface structure
alt_id: UBERON:XAO_0003028-ZFA_0000292
def: "Organism subdivision that is the collection of anatomical structures on the body surface[ZFA]." [Wikipedia:Surface_structure, ZFA:0000292, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
xref: TAO:0000292 ! surface structure
xref: XAO:0003028 ! surface structure
xref: ZFA:0000292 ! surface structure
is_a: UBERON:0000475 ! organism subdivision
relationship: develops_from UBERON:0000076 ! external ectoderm

[Term]
id: UBERON:0003103
name: compound organ
alt_id: UBERON:XAO_0003041-ZFA_0000496
def: "Anatomical structure that has as its parts two or more multi-tissue structures of at least two different types and which through specific morphogenetic processes forms a single distinct structural unit demarcated by bona fide boundaries from other distinct anatomical structures of different types. // Anatomical structure that has as its parts two or more multi-tissue structures of at least two different types and which through specific morphogenetic processes forms a single distinct structural unit demarcated by bona fide boundaries from other distinct anatomical structures of different types." [CARO:0000024, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
synonym: "organ" RELATED []
xref: BILA:0000024
xref: CARO:0000024 ! compound organ
xref: HAO:0000024 ! compound organ
xref: TAO:0000496 ! compound organ
xref: XAO:0003041 ! compound organ
xref: ZFA:0000496 ! compound organ
is_a: UBERON:0000062 ! organ

[Term]
id: UBERON:0003104
name: mesenchyme
alt_id: UBERON:XAO_0003046-ZFA_0000393
def: "Portion of tissue consisting of loosely organized undifferentiated mesodermal cells that give rise to such structures as connective tissues, blood, lymphatics, bone, and cartilage. // A mesh-like cell arrangement, less compact than an epithelium. <a href='http://zfin.org/cgi-bin/ZFIN_jump?record=ZDB-PUB-961014-576'>Kimmel et al, 1995.</a>" [BTO:0001393, Wikipedia:Mesenchyme, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
xref: BTO:0001393
xref: EHDAA:1094 ! mesenchyme
xref: EHDAA:1677 ! mesenchyme
xref: EHDAA:1703 ! mesenchyme
xref: EHDAA:177 ! mesenchyme
xref: EHDAA:205 ! mesenchyme
xref: EHDAA:2362 ! mesenchyme
xref: EHDAA:2910 ! mesenchyme
xref: EHDAA:4170 ! mesenchyme
xref: EHDAA:4176 ! mesenchyme
xref: EHDAA:4184 ! mesenchyme
xref: EHDAA:4190 ! mesenchyme
xref: EHDAA:4200 ! mesenchyme
xref: EHDAA:4782 ! mesenchyme
xref: EHDAA:4788 ! mesenchyme
xref: EHDAA:4794 ! mesenchyme
xref: EHDAA:5012 ! mesenchyme
xref: EHDAA:5149 ! mesenchyme
xref: EHDAA:5157 ! mesenchyme
xref: EHDAA:5163 ! mesenchyme
xref: EHDAA:5169 ! mesenchyme
xref: EHDAA:5175 ! mesenchyme
xref: EHDAA:5200 ! mesenchyme
xref: EHDAA:5208 ! mesenchyme
xref: EHDAA:5873 ! mesenchyme
xref: EHDAA:5879 ! mesenchyme
xref: EHDAA:589 ! mesenchyme
xref: EHDAA:601 ! mesenchyme
xref: EHDAA:6102 ! mesenchyme
xref: EHDAA:6108 ! mesenchyme
xref: EHDAA:6118 ! mesenchyme
xref: EHDAA:6128 ! mesenchyme
xref: EHDAA:6138 ! mesenchyme
xref: EHDAA:6152 ! mesenchyme
xref: EHDAA:6158 ! mesenchyme
xref: EHDAA:6164 ! mesenchyme
xref: EHDAA:6170 ! mesenchyme
xref: EHDAA:6172 ! mesenchyme
xref: EHDAA:6182 ! mesenchyme
xref: EHDAA:6188 ! mesenchyme
xref: EHDAA:6194 ! mesenchyme
xref: EHDAA:6204 ! mesenchyme
xref: EHDAA:6216 ! mesenchyme
xref: EHDAA:6222 ! mesenchyme
xref: EHDAA:6232 ! mesenchyme
xref: EHDAA:6238 ! mesenchyme
xref: EHDAA:6248 ! mesenchyme
xref: EHDAA:625 ! mesenchyme
xref: EHDAA:6258 ! mesenchyme
xref: EHDAA:6268 ! mesenchyme
xref: EHDAA:6278 ! mesenchyme
xref: EHDAA:6288 ! mesenchyme
xref: EHDAA:6302 ! mesenchyme
xref: EHDAA:6308 ! mesenchyme
xref: EHDAA:6314 ! mesenchyme
xref: EHDAA:6320 ! mesenchyme
xref: EHDAA:6322 ! mesenchyme
xref: EHDAA:6528 ! mesenchyme
xref: EHDAA:6968 ! mesenchyme
xref: EHDAA:7858 ! mesenchyme
xref: EHDAA:7993 ! mesenchyme
xref: EHDAA:8003 ! mesenchyme
xref: EHDAA:8015 ! mesenchyme
xref: EHDAA:8021 ! mesenchyme
xref: EHDAA:8031 ! mesenchyme
xref: EHDAA:8039 ! mesenchyme
xref: EHDAA:8051 ! mesenchyme
xref: EHDAA:8057 ! mesenchyme
xref: EHDAA:8128 ! mesenchyme
xref: EHDAA:8150 ! mesenchyme
xref: EHDAA:8981 ! mesenchyme
xref: EHDAA:9045 ! mesenchyme
xref: EHDAA:9051 ! mesenchyme
xref: EHDAA:9250 ! mesenchyme
xref: EHDAA:9259 ! mesenchyme
xref: EHDAA:9287 ! mesenchyme
xref: HOG:0000170 ! mesenchyme
xref: TAO:0000393 ! mesenchyme
xref: XAO:0003046 ! mesenchyme
xref: ZFA:0000393 ! mesenchyme
is_a: UBERON:0000479 ! portion of tissue
relationship: develops_from UBERON:0000926 ! mesoderm
xref: ncithesaurus:Mesenchyme ! Mesenchyme

[Term]
id: UBERON:0003105
name: dorsal lateral plate region
alt_id: UBERON:XAO_0003051-ZFA_0005028
def: "Region located near the pronephros and pronephric ducts that is a site of hematopoiesis in the embryo. // Region where blood progenitor markers are expressed. Probable site of definitive hematopoiesis between 36hpf and 4dpf." [PMID:9618755, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "AGM" RELATED []
synonym: "AGM region" RELATED []
synonym: "aorta gonad mesonephros region" RELATED []
synonym: "aorta-gonads-mesonephros region" RELATED []
synonym: "DLP" EXACT []
synonym: "dlp" EXACT []
synonym: "ventral wall of dorsal aorta" EXACT []
xref: TAO:0005028 ! ventral wall of dorsal aorta
xref: XAO:0003051 ! dorsal lateral plate region
xref: ZFA:0005028 ! ventral wall of dorsal aorta
is_a: UBERON:0000061 ! anatomical structure
relationship: part_of UBERON:0000947 ! aorta
relationship: part_of UBERON:0002390 ! hematopoietic system
relationship: part_of UBERON:0003081 ! lateral plate mesoderm

[Term]
id: UBERON:0003106
name: urostyle
alt_id: UBERON:XAO_0003080-ZFA_0000158
def: "This centrum may be formed via the fusion of the terminal centrum and half-centrum. It is sometimes termed the 'ultimate' vertebra. <a href='http://zfin.org/cgi-bin/ZFIN_jump?record=ZDB-PUB-011008-1'>Mabee and Bird, 2001.</a>" [ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "compound centrum" RELATED []
synonym: "last vertebra" RELATED []
synonym: "ultimate vertebra" RELATED []
xref: AAO:0000732 ! urostyle
xref: TAO:0000158 ! urostyle
xref: XAO:0003080 ! urostyle
xref: ZFA:0000158 ! urostyle
is_a: UBERON:0002513 ! endochondral bone
relationship: part_of UBERON:0002090 ! axial skeleton

[Term]
id: UBERON:0003107
name: meckel's cartilage
alt_id: UBERON:XAO_0003085-ZFA_0001205
def: "Paired cartilaginous component of the lower jaw that fuses together through a median inferior labial cartilage, resulting in a single curved bar of cartilage by metamorphic climax. During metamorphosis it is surrounded by the developing dentale and goniale. // Meckel's cartilage is the bilaterally paired, rod-like, cartilaginous ventral component of the lower jar, or ventral mandibular arch. It is typically resorbed in adults." [PMID:3693112, Wikipedia:Meckel's_cartilage, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "Meckel's cartilage" EXACT []
xref: AAO:0000289 ! Meckel's_cartilage
xref: EHDAA:7997 ! Meckel's cartilage
xref: HOG:0000249 ! Meckel's cartilage
xref: MA:0001580 ! meckel's cartilage
xref: TAO:0001205 ! Meckel's cartilage
xref: XAO:0003085 ! Meckel's cartilage
xref: ZFA:0001205 ! Meckel's cartilage
is_a: UBERON:0002418 ! cartilage
relationship: part_of UBERON:0001710 ! lower jaw

[Term]
id: UBERON:0003108
name: suspensorium
alt_id: UBERON:XAO_0003086-ZFA_0000444
comment: This class was created automatically from a combination of ontologies
synonym: "hyopalatine" RELATED []
synonym: "suspensoria" RELATED []
xref: AAO:0000596 ! suspensorium
xref: TAO:0000444 ! suspensorium
xref: XAO:0003086 ! suspensorium
xref: ZFA:0000444 ! suspensorium
is_a: UBERON:0000477 ! anatomical cluster

[Term]
id: UBERON:0003109
name: transverse process
alt_id: UBERON:XAO_0003102-ZFA_0001362
def: "Parapophyses are lateral or ventrolateral projections of vertebrae to which ribs are attached in Danio rerio. Parapophyses can arise through replacement ossification of a basiventral or form directly in bone. They are separated from the centrum in basal teleosts, e.g., Leptolepis coryphaenoides, Megalops and Elops." [Wikipedia:Transverse_process, ZFIN:curator]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "lateral process of basiventral" RELATED []
synonym: "parapophysis" EXACT []
xref: AAO:0000698 ! transverse_process
xref: AAO:0000708 ! parapophysis
xref: TAO:0001362 ! parapophysis
xref: XAO:0003102 ! transverse process
xref: ZFA:0001362 ! parapophysis
is_a: UBERON:0002513 ! endochondral bone
relationship: part_of UBERON:0002090 ! axial skeleton

[Term]
id: UBERON:0003110
name: otic region
alt_id: UBERON:ZFA_0000189-XAO_0003175
synonym: "cranial vault" RELATED [ZFA:0000189]
xref: XAO:0003175 ! otic region
xref: ZFA:0000189 ! otic region
is_a: UBERON:0000477 ! anatomical cluster
relationship: part_of UBERON:0001703 ! neurocranium
relationship: part_of UBERON:0002241 ! chondrocranium

[Term]
id: UBERON:0003111
name: sphenoid region
alt_id: UBERON:ZFA_0000290-XAO_0003174
xref: XAO:0003174 ! sphenoid region
xref: ZFA:0000290 ! sphenoid region
is_a: UBERON:0000477 ! anatomical cluster
relationship: part_of UBERON:0001703 ! neurocranium
relationship: part_of UBERON:0002241 ! chondrocranium

[Term]
id: UBERON:0003112
name: olfactory region
alt_id: UBERON:ZFA_0000351-XAO_0003172
synonym: "ethmoid region" EXACT [ZFA:0000351]
xref: XAO:0003172 ! olfactory region
xref: ZFA:0000351 ! olfactory region
is_a: UBERON:0000477 ! anatomical cluster
relationship: part_of UBERON:0001703 ! neurocranium
relationship: part_of UBERON:0002241 ! chondrocranium

[Term]
id: UBERON:0003113
name: dermal bone cranium
alt_id: UBERON:ZFA_0000863-XAO_0003169
synonym: "dermatocranium" EXACT [ZFA:0000863]
xref: XAO:0003169 ! dermatocranium
xref: ZFA:0000863 ! dermatocranium
is_a: UBERON:0000477 ! anatomical cluster
relationship: part_of UBERON:0000032 ! cranial structure

[Term]
id: UBERON:0003114
name: pharyngeal arch 3
alt_id: UBERON:ZFA_0001606-XAO_0000447
def: "." [Wikipedia:First_branchial_arch]
subset: uberon_slim
synonym: "branchial arch 1" EXACT [ZFA:0001606]
synonym: "first branchial arch" EXACT [XAO:0000447]
synonym: "gill arch 1" EXACT [ZFA:0001606]
synonym: "third visceral arch" RELATED [XAO:0000447]
synonym: "visceral arch 3" EXACT [ZFA:0001606]
xref: XAO:0000447 ! branchial arch 1
xref: ZFA:0001606 ! pharyngeal arch 3
is_a: UBERON:0002539 ! pharyngeal arch

[Term]
id: UBERON:0003115
name: pharyngeal arch 4
alt_id: UBERON:ZFA_0001607-XAO_0000449
def: "." [Wikipedia:Second_branchial_arch]
subset: uberon_slim
synonym: "branchial arch 2" EXACT [ZFA:0001607]
synonym: "fourth visceral arch" RELATED [XAO:0000449]
synonym: "gill arch 2" EXACT [ZFA:0001607]
synonym: "second branchial arch" EXACT [XAO:0000449]
synonym: "visceral arch 4" EXACT [ZFA:0001607]
xref: XAO:0000449 ! branchial arch 2
xref: ZFA:0001607 ! pharyngeal arch 4
is_a: UBERON:0002539 ! pharyngeal arch

[Term]
id: UBERON:0003116
name: pharyngeal arch 5
alt_id: UBERON:ZFA_0001608-XAO_0000451
synonym: "branchial arch 3" EXACT [ZFA:0001608]
synonym: "fifth visceral arch" RELATED [XAO:0000451]
synonym: "gill arch 3" EXACT [ZFA:0001608]
synonym: "third branchial arch" EXACT [XAO:0000451]
synonym: "visceral arch 5" EXACT [ZFA:0001608]
xref: XAO:0000451 ! branchial arch 3
xref: ZFA:0001608 ! pharyngeal arch 5
is_a: UBERON:0002539 ! pharyngeal arch

[Term]
id: UBERON:0003117
name: pharyngeal arch 6
alt_id: UBERON:ZFA_0001609-XAO_0000453
synonym: "branchial arch 4" EXACT [ZFA:0001609]
synonym: "fourth branchial arch" EXACT [XAO:0000453]
synonym: "gill arch 4" EXACT [ZFA:0001609]
synonym: "sixth visceral arch" RELATED [XAO:0000453]
synonym: "visceral arch 6" EXACT [ZFA:0001609]
xref: XAO:0000453 ! branchial arch 4
xref: ZFA:0001609 ! pharyngeal arch 6
is_a: UBERON:0002539 ! pharyngeal arch

[Term]
id: UBERON:0003118
name: aortic arch 1
alt_id: UBERON:ZFA_0005005-XAO_0000342
synonym: "AA1" EXACT [ZFA:0005005]
synonym: "aa1" EXACT []
synonym: "first aortic arch" EXACT [XAO:0000342]
synonym: "mandibular aortic arch" EXACT [ZFA:0005005]
xref: HOG:0000149 ! first aortic arch
xref: TAO:0005004 ! aortic arch
xref: XAO:0000342 ! aortic arch 1
xref: ZFA:0005005 ! aortic arch 1
is_a: UBERON:0001637 ! artery
relationship: part_of UBERON:0001708 ! jaw

[Term]
id: UBERON:0003119
name: aortic arch 2
alt_id: UBERON:ZFA_0005006-XAO_0000343
synonym: "AA2" EXACT [ZFA:0005006]
synonym: "aa2" EXACT []
synonym: "hyoid aortic arch" EXACT [ZFA:0005006]
synonym: "second aortic arch" EXACT [XAO:0000343]
xref: HOG:0000148 ! second aortic arch
xref: XAO:0000343 ! aortic arch 2
xref: ZFA:0005006 ! aortic arch 2
is_a: UBERON:0001637 ! artery
relationship: part_of UBERON:0003066 ! hyoid arch

[Term]
id: UBERON:0003120
name: aortic arch 3
alt_id: UBERON:ZFA_0005007-XAO_0000344
synonym: "AA3" EXACT [ZFA:0005007]
synonym: "aa3" EXACT []
synonym: "third aortic arch" EXACT [XAO:0000344]
xref: HOG:0000147 ! third aortic arch
xref: XAO:0000344 ! aortic arch 3
xref: ZFA:0005007 ! aortic arch 3
is_a: UBERON:0001637 ! artery

[Term]
id: UBERON:0003121
name: aortic arch 4
alt_id: UBERON:ZFA_0005008-XAO_0000355
synonym: "AA4" EXACT [ZFA:0005008]
synonym: "aa4" EXACT []
synonym: "fourth aortic arch" EXACT [XAO:0000355]
xref: HOG:0000146 ! fourth aortic arch
xref: XAO:0000355 ! aortic arch 4
xref: ZFA:0005008 ! aortic arch 4
is_a: UBERON:0001637 ! artery

[Term]
id: UBERON:0003122
name: aortic arch 5
alt_id: UBERON:ZFA_0005009-XAO_0000352
synonym: "AA5" EXACT [ZFA:0005009]
synonym: "aa5" EXACT []
synonym: "fifth aortic arch" EXACT [XAO:0000352]
xref: HOG:0000145 ! fifth aortic arch
xref: XAO:0000352 ! aortic arch 5
xref: ZFA:0005009 ! aortic arch 5
is_a: UBERON:0001637 ! artery

[Term]
id: UBERON:0003123
name: aortic arch 6
alt_id: UBERON:ZFA_0005016-XAO_0000353
synonym: "AA6" EXACT [ZFA:0005016]
synonym: "aa6" EXACT []
synonym: "sixth aortic arch" EXACT [XAO:0000353]
xref: HOG:0000144 ! sixth aortic arch
xref: XAO:0000353 ! aortic arch 6
xref: ZFA:0005016 ! aortic arch 6
is_a: UBERON:0001637 ! artery

[Term]
id: UBERON:0003124
name: chorion
def: "Anatomical structure that is contiguous with the embryo and is comprised of portions of tissue or cells that will not contribute to the embryo [ZFA]. The outer membrane of the two membranes enclosing the embryo in reptiles, birds, and mammals. In placental mammals it contributes to the development of the placenta[BTO]. Wikipedia: The chorion is one of the membranes that exists during pregnancy between the developing fetus and mother. It is formed by extraembryonic mesoderm and the two layers of trophoblast and surrounds the embryo and other membranes. The chorionic villi emerge from the chorion, invade the endometrium, and allow transfer of nutrients from maternal blood to fetal blood." [ZFA:0000020]
subset: uberon_slim
synonym: "chorion (vertebrates)" EXACT []
xref: BTO:0000252
xref: EHDAA:150 ! chorion
xref: FMA:80224 ! Chorion
xref: GAID:1299 ! chorion
xref: HOG:0000200 ! chorion
is_a: UBERON:0000478 ! extraembryonic structure
relationship: adjacent_to UBERON:0000922 ! embryo
relationship: part_of UBERON:0000992 ! ovary
xref: ncithesaurus:Chorion ! Chorion

[Term]
id: UBERON:0003125
name: vitelline membrane
def: "a structure directly adjacent to the outer surface of the plasma membrane of an ovum. It is composed mostly of protein fibers, with protein receptors needed for sperm binding, binding to sperm plasma membrane receptors. The species-specificity between these receptors contributes to prevention of breeding between different species [Wikipedia]. A protective layer around the egg[FBbt]." [Wikipedia:Vitelline_membrane]
synonym: "zona pellucida" RELATED []
xref: FBbt:00000042 ! vitelline membrane
xref: GAID:1318 ! vitelline membrane
is_a: UBERON:0000061 ! anatomical structure
relationship: surrounds CL:0000025 ! egg
xref: BTO:0001450 ! vitelline membrane

[Term]
id: UBERON:0003126
name: vertebrate trachea
def: "A trachea held open by up to 20 C-shaped rings of cartilage [Wikipedia]. The trachea is the portion of the airway that attaches to the bronchi as it branches [GO:dph]." [GO:0060438, Wikipedia:Vertebrate_trachea]
subset: uberon_slim
synonym: "cartilaginous trachea" EXACT []
synonym: "Windpipe" EXACT []
synonym: "windpipe" EXACT []
xref: BTO:0001388
xref: EHDAA:3078 ! trachea
xref: FMA:7394 ! Trachea
xref: GAID:361 ! trachea
xref: HOG:0000371 ! trachea
xref: MA:0000441 ! trachea
xref: MAT:0000137 ! trachea
xref: MIAA:0000137 ! trachea
xref: XAO:0000118 ! trachea
is_a: UBERON:0001005 ! trachea
relationship: part_of UBERON:0001558 ! lower respiratory tract
relationship: part_of UBERON:0002224 ! thoracic cavity

[Term]
id: UBERON:0003127
name: invertebrate trachea
def: "A trachea composed of composed of spiracles, tracheae, and tracheoles [Wikipedia]. An open tracheal system is a respiratory system, a branched network of epithelial tubes that supplies oxygen to target tissues via spiracles. An example of this is found in Drosophila melanogaster." [GO:0007424, Wikipedia:Invertebrate_trachea]
comment: TODO: system vs organ part
subset: uberon_slim
synonym: "open tracheal system" EXACT []
xref: FBbt:00005043 ! trachea
is_a: UBERON:0000483 ! epithelium
is_a: UBERON:0001005 ! trachea

[Term]
id: UBERON:0003128
name: cranium
def: "Upper portion of the skull." [Wikipedia:Cranium_(anatomy)]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "chondrocranium" RELATED []
synonym: "cranial bone" RELATED []
synonym: "cranial skeleton" RELATED []
synonym: "craniofacial bone" RELATED []
synonym: "epicranial plate" RELATED []
synonym: "skeletal system of head" RELATED []
xref: BILA:0000115
xref: BTO:0001295
xref: EFO:0000831 ! cranium
xref: EHDAA:6029 ! cranium
xref: HOG:0000334 ! cranium
xref: MA:0000316 ! cranium
xref: MAT:0000340 ! cranium
xref: MIAA:0000340 ! cranium
xref: NIF_GrossAnatomy:birnlex_1230 ! Head
xref: OpenCyc:Mx4rvVlEyJwpEbGdrcN5Y29ycA
xref: TAO:0000737 ! cranium
xref: ZFA:0000737 ! cranium
is_a: UBERON:0000032 ! cranial structure
relationship: part_of UBERON:0000033 ! head

[Term]
id: UBERON:0003129
name: skull
def: "Bony structure that is part of the head consisting of cranium and mandible." [Wikipedia:Skull]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "chondrocranium" RELATED []
synonym: "cranial bone" RELATED []
synonym: "cranial skeleton" RELATED []
synonym: "craniofacial bone" RELATED []
synonym: "epicranial plate" RELATED []
synonym: "skeletal system of head" RELATED []
synonym: "skull" RELATED []
synonym: "skull bone" RELATED []
xref: EFO:0000831 ! cranium
xref: FMA:46565 ! Skull
is_a: UBERON:0000032 ! cranial structure
relationship: has_part UBERON:0001684 ! mandible
relationship: has_part UBERON:0003128 ! cranium
xref: ncithesaurus:Skull ! Skull

[Term]
id: UBERON:0003130
name: arthropod sternum
alt_id: UBERON:FBbt_00004557-FMA_7485-MA_0001331
def: "ventral portion of a segment of an arthropod thorax or abdomen. In insects, the sterna are usually single, large sclerites, and external. However, they can sometimes be divided in two or more, in which case the subunits are called sternites, and may also be modified on the terminal abdominal segments so as to form part of the functional genitalia, in which case they are frequently reduced in size and development, and may become internalized and/or membranous." [Wikipedia:Sternum_(arthropod)]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "sternum" BROAD []
xref: FBbt:00004557 ! sternum
xref: HAO:0000956 ! sternum
is_a: UBERON:0000061 ! anatomical structure
relationship: part_of UBERON:0000915 ! thorax

[Term]
id: UBERON:0003131
name: arthropod tibia
def: "A section of the arthropod leg." [Wikipedia:Arthropod_leg]
comment: Homologies of leg segments between groups are difficult to prove and are the source of much argument. Some authors posit up to eleven segments per leg for the most recent common ancestor of extant arthropods [1], but modern arthropods have eight or fewer. It has been argued [2][3] that the ancestral leg need not have been so complex, and that other events, such as the successive loss of function of a Hox-gene could result in parallel gains of leg segments.
subset: uberon_slim
synonym: "shankbone" EXACT [Wikipedia:Tibia]
synonym: "shinbone" EXACT [Wikipedia:Tibia]
synonym: "Tibia" EXACT []
xref: FBbt:00004642 ! tibia
xref: HAO:0001017 ! tibia
is_a: UBERON:0000475 ! organism subdivision
relationship: part_of UBERON:0000978 ! leg
xref: ncithesaurus:Tibia ! Tibia

[Term]
id: UBERON:0003132
name: arthropod hypopharynx
def: "A median tonguelike structure arising from the mouth." [http://www.britannica.com/EBchecked/topic/279974/hypopharynx]
subset: uberon_slim
xref: FBbt:00005751 ! hypopharynx
xref: HAO:0000409 ! hypopharynx
is_a: UBERON:0000477 ! anatomical cluster
relationship: part_of UBERON:0001042 ! pharynx

[Term]
id: UBERON:0003133
name: reproductive organ
def: "An organ involved in reproduction" [UBERON:xp]
synonym: "reproductive system organ" EXACT []
synonym: "sex organ" EXACT []
is_a: UBERON:0000062 ! organ
intersection_of: UBERON:0000062 ! organ
intersection_of: capable_of GO:0000003
xref: MA:0001752 ! reproductive organ

[Term]
id: UBERON:0003134
name: female reproductive organ
def: "A female organ involved in reproduction" [UBERON:xp]
synonym: "female reproductive system organ" EXACT []
synonym: "female sex organ" EXACT []
is_a: UBERON:0003133 ! reproductive organ
intersection_of: UBERON:0003133 ! reproductive organ
intersection_of: part_of UBERON:0003100 ! female organism

[Term]
id: UBERON:0003135
name: male reproductive organ
def: "A male organ involved in reproduction" [UBERON:xp]
synonym: "male reproductive system organ" EXACT []
synonym: "male sex organ" EXACT []
is_a: UBERON:0003133 ! reproductive organ
intersection_of: UBERON:0003133 ! reproductive organ
intersection_of: part_of UBERON:0003101 ! male organism

[Term]
id: UBERON:0003136
name: tagma
alt_id: UBERON:FBbt_00000002-HAO_0000988
xref: FBbt:00000002 ! tagma
xref: HAO:0000988 ! tagma
is_a: UBERON:0000475 ! organism subdivision

[Term]
id: UBERON:0003137
name: antennal segment
alt_id: UBERON:FBbt_00000009-HAO_0000104
xref: FBbt:00000009 ! antennal segment
xref: HAO:0000104 ! antennal segment
is_a: UBERON:0000914 ! segment

[Term]
id: UBERON:0003138
name: thoracic segment
alt_id: UBERON:FBbt_00000016-HAO_0001013
xref: FBbt:00000016 ! thoracic segment
xref: HAO:0001013 ! thoracic segment
is_a: UBERON:0000914 ! segment
relationship: part_of UBERON:0000915 ! thorax

[Term]
id: UBERON:0003139
name: larval tagma
alt_id: UBERON:FBbt_00001728-HAO_0000462
xref: FBbt:00001728 ! larval tagma
xref: HAO:0000462 ! larval tagma
is_a: UBERON:0000475 ! organism subdivision
relationship: part_of UBERON:0002548 ! larva

[Term]
id: UBERON:0003140
name: larval thorax
alt_id: UBERON:FBbt_00001741-HAO_0000463
xref: FBbt:00001741 ! larval thorax
xref: HAO:0000463 ! larval thorax
is_a: UBERON:0000915 ! thorax

[Term]
id: UBERON:0003141
name: larval abdomen
alt_id: UBERON:FBbt_00001746-HAO_0000460
xref: FBbt:00001746 ! larval abdomen
xref: HAO:0000460 ! larval abdomen
is_a: UBERON:0000916 ! abdomen

[Term]
id: UBERON:0003142
name: prepupa
alt_id: UBERON:FBbt_00002952-HAO_0000812
synonym: "PP" RELATED [FBbt:00002952]
xref: FBbt:00002952 ! prepupa
xref: HAO:0000812 ! prepupa
is_a: UBERON:0000468 ! multi-cellular organism
relationship: develops_from UBERON:0002548 ! larva
xref: BTO:0001110 ! prepupa

[Term]
id: UBERON:0003143
name: pupa
alt_id: UBERON:FBbt_00002953-HAO_0000886
synonym: "P" RELATED [FBbt:00002953]
xref: FBbt:00002953 ! pupa
xref: HAO:0000886 ! pupa
is_a: UBERON:0000468 ! multi-cellular organism
relationship: existence_starts_and_ends_during UBERON:0000070 ! pupal stage
xref: BTO:0001143 ! pupa

[Term]
id: UBERON:0003144
name: adult tagma
alt_id: UBERON:FBbt_00003005-HAO_0000089
xref: FBbt:00003005 ! adult tagma
xref: HAO:0000089 ! adult tagma
is_a: UBERON:0000475 ! organism subdivision

[Term]
id: UBERON:0003145
name: adult thorax
alt_id: UBERON:FBbt_00003018-HAO_0000090
xref: FBbt:00003018 ! adult thorax
xref: HAO:0000090 ! adult thorax
is_a: UBERON:0000915 ! thorax

[Term]
id: UBERON:0003146
name: adult abdomen
alt_id: UBERON:FBbt_00003023-HAO_0000088
xref: FBbt:00003023 ! adult abdomen
xref: HAO:0000088 ! adult abdomen
is_a: UBERON:0000916 ! abdomen

[Term]
id: UBERON:0003147
name: peritreme
alt_id: UBERON:FBbt_00003121-HAO_0000712
synonym: "rim" RELATED [FBbt:00003121]
xref: FBbt:00003121 ! peritreme
xref: HAO:0000712 ! peritreme
is_a: UBERON:0000466 ! immaterial anatomical entity

[Term]
id: UBERON:0003148
name: sclerite
alt_id: UBERON:FBbt_00004475-HAO_0000909
synonym: "plate" RELATED [FBbt:00004475]
xref: FBbt:00004475 ! sclerite
xref: HAO:0000909 ! sclerite
is_a: UBERON:0000479 ! portion of tissue

[Term]
id: UBERON:0003149
name: tergite
alt_id: UBERON:FBbt_00004476-HAO_0001005
comment: DV with CARO
synonym: "abdominal tergite" EXACT [FBbt:00004476]
xref: FBbt:00004476 ! tergite
xref: HAO:0001005 ! tergite
is_a: UBERON:0000476 ! acellular anatomical structure
is_a: UBERON:0000479 ! portion of tissue

[Term]
id: UBERON:0003150
name: sternite
alt_id: UBERON:FBbt_00004477-HAO_0000955
comment: DV with CARO
synonym: "abdominal sternite" EXACT [FBbt:00004477]
xref: FBbt:00004477 ! sternite
xref: HAO:0000955 ! sternite
is_a: UBERON:0000476 ! acellular anatomical structure
is_a: UBERON:0000479 ! portion of tissue

[Term]
id: UBERON:0003151
name: foramen
alt_id: UBERON:FBbt_00004478-HAO_0000345
xref: FBbt:00004478 ! foramen
xref: HAO:0000345 ! foramen
is_a: UBERON:0000464 ! anatomical space

[Term]
id: UBERON:0003152
name: phragma
alt_id: UBERON:FBbt_00004480-HAO_0000716
def: "The lamella that serves as the site of attachment of the longitudinal flight muscle [HAO]." [HAO:0000716]
xref: FBbt:00004480 ! phragma
xref: HAO:0000716 ! phragma
is_a: UBERON:0000061 ! anatomical structure

[Term]
id: UBERON:0003153
name: head capsule
alt_id: UBERON:FBbt_00004482-HAO_0000398
xref: FBbt:00004482 ! head capsule
xref: HAO:0000398 ! head capsule
is_a: UBERON:0000477 ! anatomical cluster

[Term]
id: UBERON:0003154
name: gena
alt_id: UBERON:FBbt_00004491-HAO_0000371
synonym: "cheek" RELATED [FBbt:00004491]
xref: FBbt:00004491 ! gena
xref: HAO:0000371 ! gena
is_a: UBERON:0000061 ! anatomical structure

[Term]
id: UBERON:0003155
name: occiput
alt_id: UBERON:FBbt_00004492-HAO_0000658
xref: FBbt:00004492 ! occiput
xref: HAO:0000658 ! occiput
is_a: UBERON:0000061 ! anatomical structure

[Term]
id: UBERON:0003156
name: postocciput
alt_id: UBERON:FBbt_00004494-HAO_0000790
xref: FBbt:00004494 ! postocciput
xref: HAO:0000790 ! postocciput
is_a: UBERON:0000061 ! anatomical structure

[Term]
id: UBERON:0003157
name: postgena
alt_id: UBERON:FBbt_00004496-HAO_0000776
xref: FBbt:00004496 ! postgena
xref: HAO:0000776 ! postgena
is_a: UBERON:0000061 ! anatomical structure

[Term]
id: UBERON:0003158
name: tentorial pit
alt_id: UBERON:FBbt_00004501-HAO_0000999
xref: FBbt:00004501 ! tentorial pit
xref: HAO:0000999 ! tentorial pit
is_a: UBERON:0000061 ! anatomical structure

[Term]
id: UBERON:0003159
name: anterior tentorial pit
alt_id: UBERON:FBbt_00004502-HAO_0000126
xref: FBbt:00004502 ! anterior tentorial pit
xref: HAO:0000126 ! anterior tentorial pit
is_a: UBERON:0000061 ! anatomical structure

[Term]
id: UBERON:0003160
name: posterior tentorial pit
alt_id: UBERON:FBbt_00004503-HAO_0000768
xref: FBbt:00004503 ! posterior tentorial pit
xref: HAO:0000768 ! posterior tentorial pit
is_a: UBERON:0000061 ! anatomical structure

[Term]
id: UBERON:0003161
name: dorsal ocellus
alt_id: UBERON:FBbt_00004505-HAO_0000661
def: "A simple visual organ of insects[GO]. Two ocelli appear on the vertical and one on the frontal plate[FBbt]. The multi-tissue structure that is located on the top of the head, composed of the corneal lens, pigment cell, rhabdoms and synaptic plexus[HAO]. Two evolutionary distinct ocellus types exist [2]: dorsal ocelli (or simply 'ocelli'), found in most insects, and lateral ocelli (or stemmata), which are found in the larvae of some insect orders. They are structurally and functionally very different. Simple eyes of other animals, e.g. cnidarians may also be referred to as 'ocelli', but again the structure and anatomy of these eyes is quite distinct from those of the dorsal ocelli of insects[Wikipedia]." [FBbt:00004505, GO:0008056, HAO:0000661, Wikipedia:Ocellus#Ocelli]
comment: DV with CARO
synonym: "dorsal ocelli" RELATED PLURAL []
synonym: "ocelli" RELATED PLURAL []
synonym: "ocellus" EXACT []
xref: FBbt:00004505 ! ocellus
xref: HAO:0000661 ! ocellus
is_a: UBERON:0000481 ! multi-tissue structure
is_a: UBERON:0000963 ! head sensillum
xref: BTO:0001758 ! ocellus

[Term]
id: UBERON:0003162
name: lateral ocellus
alt_id: UBERON:FBbt_00004506-HAO_0000481
def: "The ocellus that is paired[HAO]. The number, form, and function of the dorsal ocelli varies markedly throughout insect orders. They tend to be larger and more strongly expressed in flying insects (particularly bees, wasps, dragonflies and locusts), where they are typically found as a triplet. Two lateral ocelli are directed to the left and right of the head respectively, while a central (median) ocellus is directed frontally. In some terrestrial insects (e.g. some ants and cockroaches), only two lateral ocelli are present: the median ocellus is absent. Note that the unfortunately labelled 'lateral ocelli' here refers to the sideways facing position of the ocelli, which are of the dorsal type. They should not be confused with the lateral ocelli of some insect larvae (see stemmata)[Wikipedia]." [HAO:0000481, Wikipedia:Ocellus#Ocelli]
xref: FBbt:00004506 ! lateral ocellus
xref: HAO:0000481 ! lateral ocellus
is_a: UBERON:0003161 ! dorsal ocellus

[Term]
id: UBERON:0003163
name: mouthpart
alt_id: UBERON:FBbt_00004520-HAO_0000639
comment: TODO
xref: FBbt:00004520 ! mouthpart
xref: HAO:0000639 ! mouthparts
is_a: UBERON:0000477 ! anatomical cluster

[Term]
id: UBERON:0003164
name: clypeus
alt_id: UBERON:FBbt_00004521-HAO_0000212
xref: FBbt:00004521 ! clypeus
xref: HAO:0000212 ! clypeus
is_a: UBERON:0000466 ! immaterial anatomical entity

[Term]
id: UBERON:0003165
name: cibarium
alt_id: UBERON:FBbt_00004526-HAO_0000201
synonym: "atrium" RELATED [FBbt:00004526]
xref: FBbt:00004526 ! cibarium
xref: HAO:0000201 ! cibarium
is_a: UBERON:0000464 ! anatomical space

[Term]
id: UBERON:0003166
name: prementum
alt_id: UBERON:FBbt_00004534-HAO_0000804
synonym: "theca" RELATED [FBbt:00004534]
xref: FBbt:00004534 ! prementum
xref: HAO:0000804 ! prementum
is_a: UBERON:0000914 ! segment

[Term]
id: UBERON:0003167
name: lacinia
alt_id: UBERON:FBbt_00004536-HAO_0000457
xref: FBbt:00004536 ! lacinia
xref: HAO:0000457 ! lacinia
is_a: UBERON:0000479 ! portion of tissue

[Term]
id: UBERON:0003168
name: mentum
alt_id: UBERON:FBbt_00004544-HAO_0000534
xref: FBbt:00004544 ! mentum
xref: HAO:0000534 ! mentum
is_a: UBERON:0000479 ! portion of tissue

[Term]
id: UBERON:0003169
name: cervical sclerite
alt_id: UBERON:FBbt_00004548-HAO_0000195
comment: DV with CARO
xref: FBbt:00004548 ! cervical sclerite
xref: HAO:0000195 ! cervical sclerite
is_a: UBERON:0000476 ! acellular anatomical structure
is_a: UBERON:0000479 ! portion of tissue

[Term]
id: UBERON:0003170
name: tergum
alt_id: UBERON:FBbt_00004552-HAO_0001006
xref: FBbt:00004552 ! tergum
xref: HAO:0001006 ! tergum
is_a: UBERON:0000477 ! anatomical cluster

[Term]
id: UBERON:0003171
name: episternum
alt_id: UBERON:FBbt_00004554-HAO_0000303
xref: FBbt:00004554 ! episternum
xref: HAO:0000303 ! episternum
is_a: UBERON:0000061 ! anatomical structure

[Term]
id: UBERON:0003172
name: epimeron
alt_id: UBERON:FBbt_00004556-HAO_0000299
xref: FBbt:00004556 ! epimeron
xref: HAO:0000299 ! epimeron
is_a: UBERON:0000061 ! anatomical structure

[Term]
id: UBERON:0003173
name: pronotum
alt_id: UBERON:FBbt_00004561-HAO_0000853
xref: FBbt:00004561 ! pronotum
xref: HAO:0000853 ! pronotum
is_a: UBERON:0000061 ! anatomical structure
is_a: UBERON:0000477 ! anatomical cluster

[Term]
id: UBERON:0003174
name: furcasternum
alt_id: UBERON:FBbt_00004570-HAO_0000367
xref: FBbt:00004570 ! furcasternum
xref: HAO:0000367 ! furcasternum
is_a: UBERON:0000061 ! anatomical structure

[Term]
id: UBERON:0003175
name: prescutum
alt_id: UBERON:FBbt_00004582-HAO_0000815
xref: FBbt:00004582 ! prescutum
xref: HAO:0000815 ! prescutum
is_a: UBERON:0000061 ! anatomical structure

[Term]
id: UBERON:0003176
name: anterior notal wing process
alt_id: UBERON:FBbt_00004585-HAO_0000120
xref: FBbt:00004585 ! anterior notal wing process
xref: HAO:0000120 ! anterior notal wing process
is_a: UBERON:0000061 ! anatomical structure

[Term]
id: UBERON:0003177
name: posterior notal wing process
alt_id: UBERON:FBbt_00004586-HAO_0000758
xref: FBbt:00004586 ! posterior notal wing process
xref: HAO:0000758 ! posterior notal wing process
is_a: UBERON:0000061 ! anatomical structure

[Term]
id: UBERON:0003178
name: postnotum
alt_id: UBERON:FBbt_00004588-HAO_0000786
synonym: "postscutellum" RELATED [FBbt:00004588]
xref: FBbt:00004588 ! postnotum
xref: HAO:0000786 ! postnotum
is_a: UBERON:0000061 ! anatomical structure

[Term]
id: UBERON:0003179
name: pleural wing process
alt_id: UBERON:FBbt_00004595-HAO_0000726
xref: FBbt:00004595 ! pleural wing process
xref: HAO:0000726 ! pleural wing process
is_a: UBERON:0000061 ! anatomical structure

[Term]
id: UBERON:0003180
name: anepisternum
alt_id: UBERON:FBbt_00004597-HAO_0000094
synonym: "mesopleurite" RELATED [FBbt:00004597]
xref: FBbt:00004597 ! anepisternum
xref: HAO:0000094 ! anepisternum
is_a: UBERON:0000061 ! anatomical structure

[Term]
id: UBERON:0003181
name: scutoscutellar suture
alt_id: UBERON:FBbt_00004601-HAO_0000920
xref: FBbt:00004601 ! scutoscutellar suture
xref: HAO:0000920 ! scutoscutellar suture
is_a: UBERON:0000969 ! suture

[Term]
id: UBERON:0003182
name: pleural suture
alt_id: UBERON:FBbt_00004603-HAO_0000725
xref: FBbt:00004603 ! pleural suture
xref: HAO:0000725 ! pleural suture
is_a: UBERON:0000061 ! anatomical structure
is_a: UBERON:0000969 ! suture

[Term]
id: UBERON:0003183
name: notopleural suture
alt_id: UBERON:FBbt_00004604-HAO_0000649
xref: FBbt:00004604 ! notopleural suture
xref: HAO:0000649 ! notopleural suture
is_a: UBERON:0000969 ! suture

[Term]
id: UBERON:0003184
name: mesofurca
alt_id: UBERON:FBbt_00004619-HAO_0000547
synonym: "mesothoracic sternal apophysis" RELATED [FBbt:00004619]
xref: FBbt:00004619 ! mesofurca
xref: HAO:0000547 ! mesofurca
is_a: UBERON:0000061 ! anatomical structure
is_a: UBERON:0000477 ! anatomical cluster

[Term]
id: UBERON:0003185
name: metafurca
alt_id: UBERON:FBbt_00004638-HAO_0000592
synonym: "metathoracic sternal apophysis" RELATED [FBbt:00004638]
xref: FBbt:00004638 ! metafurca
xref: HAO:0000592 ! metafurca
is_a: UBERON:0000061 ! anatomical structure
is_a: UBERON:0000477 ! anatomical cluster

[Term]
id: UBERON:0003186
name: coxa
alt_id: UBERON:FBbt_00004641-HAO_0000228
xref: FBbt:00004641 ! coxa
xref: HAO:0000228 ! coxa
is_a: UBERON:0000475 ! organism subdivision
is_a: UBERON:0000914 ! segment
relationship: part_of UBERON:0000978 ! leg

[Term]
id: UBERON:0003187
name: pretarsus
alt_id: UBERON:FBbt_00004653-HAO_0000820
xref: FBbt:00004653 ! pretarsus
xref: HAO:0000820 ! pretarsus
is_a: UBERON:0000475 ! organism subdivision
is_a: UBERON:0000914 ! segment
relationship: part_of UBERON:0000978 ! leg

[Term]
id: UBERON:0003188
name: auxilia
alt_id: UBERON:FBbt_00004654-HAO_0000153
xref: FBbt:00004654 ! auxilia
xref: HAO:0000153 ! auxilia
is_a: UBERON:0000479 ! portion of tissue

[Term]
id: UBERON:0003189
name: unguitractor plate
alt_id: UBERON:FBbt_00004658-HAO_0001043
comment: DV with CARO
xref: FBbt:00004658 ! unguitractor plate
xref: HAO:0001043 ! unguitractor plate
is_a: UBERON:0000476 ! acellular anatomical structure
is_a: UBERON:0000479 ! portion of tissue

[Term]
id: UBERON:0003190
name: empodium
alt_id: UBERON:FBbt_00004659-HAO_0000288
xref: FBbt:00004659 ! empodium
xref: HAO:0000288 ! empodium
is_a: UBERON:0000466 ! immaterial anatomical entity

[Term]
id: UBERON:0003191
name: tegula
alt_id: UBERON:FBbt_00004730-HAO_0000993
xref: FBbt:00004730 ! tegula
xref: HAO:0000993 ! tegula
is_a: UBERON:0000479 ! portion of tissue
relationship: part_of UBERON:0000984 ! thoracic wing

[Term]
id: UBERON:0003192
name: axillary sclerite
alt_id: UBERON:FBbt_00004737-HAO_0000159
comment: DV with CARO
xref: FBbt:00004737 ! axillary sclerite
xref: HAO:0000159 ! axillary sclerite
is_a: UBERON:0000476 ! acellular anatomical structure
is_a: UBERON:0000479 ! portion of tissue

[Term]
id: UBERON:0003193
name: axillary cord
alt_id: UBERON:FBbt_00004744-HAO_0000157
xref: FBbt:00004744 ! axillary cord
xref: HAO:0000157 ! axillary cord
is_a: UBERON:0000476 ! acellular anatomical structure

[Term]
id: UBERON:0003194
name: wing vein
alt_id: UBERON:FBbt_00004751-HAO_0001095
xref: FBbt:00004751 ! wing vein
xref: HAO:0001095 ! wing vein
is_a: UBERON:0000476 ! acellular anatomical structure
intersection_of: UBERON:0001638 ! vein
intersection_of: OBO_REL:part_of UBERON:0000023 ! wing

[Term]
id: UBERON:0003195
name: crossvein
alt_id: UBERON:FBbt_00004765-HAO_0000236
xref: FBbt:00004765 ! crossvein
xref: HAO:0000236 ! crossvein
is_a: UBERON:0000476 ! acellular anatomical structure

[Term]
id: UBERON:0003196
name: wing cell
alt_id: UBERON:FBbt_00004769-HAO_0001091
synonym: "intervein" RELATED [FBbt:00004769]
xref: FBbt:00004769 ! wing cell
xref: HAO:0001091 ! wing cell
is_a: UBERON:0000479 ! portion of tissue

[Term]
id: UBERON:0003197
name: costal cell
alt_id: UBERON:FBbt_00004770-HAO_0000226
xref: FBbt:00004770 ! costal cell
xref: HAO:0000226 ! costal cell
is_a: UBERON:0000479 ! portion of tissue

[Term]
id: UBERON:0003198
name: aedeagus
alt_id: UBERON:FBbt_00004850-HAO_0000091
xref: FBbt:00004850 ! aedeagus
xref: HAO:0000091 ! aedeagus
is_a: UBERON:0000472 ! simple organ

[Term]
id: UBERON:0003199
name: egg chamber
alt_id: UBERON:FBbt_00004894-HAO_0000287
synonym: "follicle" RELATED [FBbt:00004894]
synonym: "germarium derived egg chamber" EXACT [FBbt:00004894]
xref: FBbt:00004894 ! egg chamber
xref: HAO:0000287 ! egg chamber
is_a: UBERON:0000464 ! anatomical space

[Term]
id: UBERON:0003200
name: pedicel
alt_id: UBERON:FBbt_00004920-HAO_0000706
xref: FBbt:00004920 ! pedicel
xref: HAO:0000706 ! pedicel
is_a: UBERON:0000914 ! segment
relationship: part_of UBERON:0000474 ! female reproductive system

[Term]
id: UBERON:0003201
name: exocuticle
alt_id: UBERON:FBbt_00004973-HAO_0000311
xref: FBbt:00004973 ! exocuticle
xref: HAO:0000311 ! exocuticle
is_a: UBERON:0000476 ! acellular anatomical structure
xref: BTO:0001602 ! exocuticle

[Term]
id: UBERON:0003202
name: endocuticle
alt_id: UBERON:FBbt_00004974-HAO_0000290
xref: FBbt:00004974 ! endocuticle
xref: HAO:0000290 ! endocuticle
is_a: UBERON:0000476 ! acellular anatomical structure
xref: BTO:0001603 ! endocuticle

[Term]
id: UBERON:0003203
name: apodeme
alt_id: UBERON:FBbt_00005091-HAO_0000142
xref: FBbt:00005091 ! apodeme
xref: HAO:0000142 ! apodeme
is_a: UBERON:0000061 ! anatomical structure

[Term]
id: UBERON:0003204
name: epipharynx
alt_id: UBERON:FBbt_00005750-HAO_0000301
xref: FBbt:00005750 ! epipharynx
xref: HAO:0000301 ! epipharynx
is_a: UBERON:0000481 ! multi-tissue structure
relationship: part_of UBERON:0001041 ! foregut

[Term]
id: UBERON:0003205
name: articulation
alt_id: UBERON:FBbt_00005811-HAO_0000151
xref: FBbt:00005811 ! articulation
xref: HAO:0000151 ! articulation
is_a: UBERON:0000477 ! anatomical cluster
xref: ncithesaurus:Articulation ! Articulation

[Term]
id: UBERON:0003206
name: apophysis
alt_id: UBERON:FBbt_00005813-HAO_0000143
xref: FBbt:00005813 ! apophysis
xref: HAO:0000143 ! apophysis
is_a: UBERON:0000061 ! anatomical structure
xref: FMA:75428 ! Apophysis

[Term]
id: UBERON:0003207
name: appendage segment
alt_id: UBERON:FBbt_00007018-HAO_0000145
xref: FBbt:00007018 ! appendage segment
xref: HAO:0000145 ! appendage segment
is_a: UBERON:0000475 ! organism subdivision
is_a: UBERON:0000914 ! segment

[Term]
id: UBERON:0003208
name: region of cerebral cortex
synonym: "cerebral cortex part" EXACT []
xref: FMA:242193 ! Region of cerebral cortex
is_a: UBERON:0000061 ! anatomical structure
intersection_of: UBERON:0000061 ! anatomical structure
intersection_of: part_of UBERON:0000956 ! cerebral cortex
relationship: part_of UBERON:0000956 ! cerebral cortex

[Term]
id: UBERON:0003209
name: blood nerve barrier
def: "barrier between the perineurium of peripheral nerves and the vascular endothelium of endoneurial capillaries. The perineurium acts as a diffusion barrier, but ion permeability at the blood-nerve barrier is still higher than at the blood-brain barrier[GO]." [GO:0008065, Wikipedia:Blood-nerve_barrier]
synonym: "blood-nerve barrier" EXACT []
is_a: UBERON:0000119 ! cell layer
relationship: adjacent_to UBERON:0000179 ! haemolymphatic fluid
relationship: adjacent_to UBERON:0001021 ! nerve

[Term]
id: UBERON:0003210
name: blood-cerebrospinal fluid barrier
def: "barrier in the choroid plexus located in the lateral, third, and fourth brain ventricles that controls the entrance of substances into the cerebrospinal fluid from the blood[MP]." [MP:0006088]
is_a: UBERON:0000119 ! cell layer
relationship: adjacent_to UBERON:0000178 ! blood
relationship: adjacent_to UBERON:0001359 ! cerebrospinal fluid

[Term]
id: UBERON:0003211
name: median ocellus
def: "The ocellus that is is located medially on the cranium[HAO]. The number, form, and function of the dorsal ocelli varies markedly throughout insect orders. They tend to be larger and more strongly expressed in flying insects (particularly bees, wasps, dragonflies and locusts), where they are typically found as a triplet. Two lateral ocelli are directed to the left and right of the head respectively, while a central (median) ocellus is directed frontally. In some terrestrial insects (e.g. some ants and cockroaches), only two lateral ocelli are present: the median ocellus is absent. Note that the unfortunately labelled 'lateral ocelli' here refers to the sideways facing position of the ocelli, which are of the dorsal type. They should not be confused with the lateral ocelli of some insect larvae (see stemmata)[Wikipedia]." [HAO:0000526, Wikipedia:Ocellus#Ocelli]
xref: FBbt:00004507 ! medial ocellus
xref: HAO:0000526 ! median ocellus
is_a: UBERON:0003161 ! dorsal ocellus

[Term]
id: UBERON:0003212
name: gustatory organ
synonym: "taste organ" EXACT []
xref: FBbt:00005159 ! gustatory sensory organ
xref: FMA:77853 ! Gustatory organ
is_a: UBERON:0000005 ! chemosensory sensory organ
intersection_of: UBERON:0000062 ! organ
intersection_of: part_of UBERON:0001033 ! gustatory system
relationship: part_of UBERON:0001033 ! gustatory system

[Term]
id: UBERON:0003213
name: cranial ganglion
alt_id: UBERON:MA_0000184-MA_0000214-MIAA_0000200-WBbt_0005135-ZFA_0000013
def: "Ganglion which is located in the head." [ZFIN:curator]
subset: uberon_slim
synonym: "cranial ganglia" RELATED []
synonym: "cranial ganglion" EXACT []
synonym: "head ganglion" RELATED []
xref: BTO:0000106
xref: EFO:0000902 ! cranial ganglion
xref: HOG:0000076 ! cranial ganglion
xref: MA:0000214 ! cranial ganglion
xref: MAT:0000200 ! cranial ganglion
xref: MIAA:0000200 ! cranial ganglion
xref: TAO:0000013 ! cranial ganglia
xref: WBbt:0005135 ! head ganglion
xref: XAO:0000027 ! cranial ganglion
xref: ZFA:0000013 ! cranial ganglion
is_a: UBERON:0000045 ! ganglion
relationship: part_of UBERON:0000033 ! head

[Term]
id: UBERON:0003214
name: mammary gland alveolus
def: "a sac-like structure that is found in the mature gland[GO]." [GO:0060749]
synonym: "lactiferous alveolus" EXACT []
synonym: "lactiferous gland alveolus" EXACT []
synonym: "mammary alveolus" EXACT []
xref: FMA:73285 ! Alveolus of lactiferous gland
is_a: UBERON:0003215 ! alveolus
intersection_of: UBERON:0003215 ! alveolus
intersection_of: part_of UBERON:0001911 ! lactiferous gland
relationship: part_of UBERON:0001911 ! lactiferous gland
xref: MA:0002760 ! mammary gland alveolus

[Term]
id: UBERON:0003215
name: alveolus
def: "organ part that has the form of a hollow cavity[WP]." [Wikipedia:Alveolus]
xref: FMA:82493 ! Alveolus
is_a: UBERON:0000064 ! organ part
xref: ncithesaurus:Alveolus ! Alveolus

[Term]
id: UBERON:0003216
name: hard palate
alt_id: UBERON:FMA_54549-FMA_55023-MA_0002476-MA_0002477-MIAA_0000161
def: "anterior portion of the palate consisting of bone and mucous membranes[GO]." [GO:0060022, Wikipedia:Hard_palate]
comment: This class was created automatically from a combination of ontologies
subset: uberon_slim
synonym: "hard palate" EXACT []
xref: FMA:55023 ! Hard palate
xref: GAID:221 ! hard palate
xref: MA:0002477 ! hard palate
xref: MAT:0000161 ! hard palate
xref: MIAA:0000161 ! hard palate
is_a: UBERON:0000061 ! anatomical structure
relationship: part_of UBERON:0001716 ! palate
xref: ncithesaurus:Hard_Palate ! Hard Palate

[Term]
id: UBERON:0003217
name: neural lobe of neurohypophysis
alt_id: UBERON:FMA_74636-ZFA_0001271
def: "." [Wikipedia:Neurohypophysis]
comment: TODO - compare with UBERON:0002198
subset: uberon_slim
synonym: "pars nervosa of hypophysis" EXACT []
synonym: "pars nervosa of neurohypophysis" EXACT []
synonym: "pars nervosa of posterior lobe of pituitary gland" EXACT []
synonym: "posterior lobe-3" EXACT []
xref: FMA:74636 ! Neural lobe of neurohypophysis
xref: NIF_GrossAnatomy:birnlex_941 ! Pars nervosa of hypophysis
is_a: UBERON:0002616 ! regional part of brain
relationship: part_of UBERON:0002198 ! neurohypophysis

[Term]
id: UBERON:0003218
name: ovary septum
def: "Septum that divides the ovary, the basal portion of a carpel or group of fused carpels, that encloses the ovule(s)[GO]." [GO:0080126, Wikipedia:Septum]
is_a: UBERON:0003037 ! septum

[Term]
id: UBERON:0003219
name: shell septum
def: "Septum that divides the internal chambers (camerae) of the shell of a cephalopod, namely nautiloids or ammonoids." [GO:0080126, Wikipedia:Septum_(marine_biology)]
is_a: UBERON:0003037 ! septum

[Term]
id: UBERON:0003220
name: metanephric blastema
def: "one of the two embryological structures that give rise to the kidney (the other is the ureteric bud). The metanephric blastema mostly develops into nephrons, but can also form parts of the collecting duct system.[WP]" [Wikipedia:Metanephric_blastema]
synonym: "metanephric mesenchyme" EXACT [Wikipedia:Metanephric_blastema]
synonym: "metanephric mesoderm" EXACT [Wikipedia:Metanephric_blastema]
is_a: UBERON:0002050 ! embryonic structure
relationship: develops_from UBERON:0003074 ! wolffian duct

[Term]
id: UBERON:0003221
name: phalanx
def: "Long bones of fingers and toes[Obol]. In primates such as humans and monkeys, the thumb and big toe have two phalanges, while the other fingers and toes consist of three[WP]." [Wikipedia:Phalanx]
xref: MA:0000304 ! phalanx
is_a: UBERON:0002495 ! long bone
intersection_of: UBERON:0002495 ! long bone
intersection_of: part_of UBERON:0002544 ! digit
relationship: part_of UBERON:0002544 ! digit
xref: ncithesaurus:Phalanx ! Phalanx

[Term]
id: UBERON:0003223
name: parenchyma of liver
xref: EHDAA:2201 ! parenchyma
intersection_of: UBERON:0000353 ! parenchyma
intersection_of: part_of UBERON:0002107 ! liver

[Term]
id: UBERON:0003224
name: syncytiotrophoblast of chorion
xref: EHDAA:156 ! syncytiotrophoblast
intersection_of: UBERON:0000371 ! syncytiotrophoblast
intersection_of: part_of UBERON:0003124 ! chorion

[Term]
id: UBERON:0003225
name: primitive endoderm of inner cell mass
xref: EHDAA:44 ! primitive endoderm
intersection_of: UBERON:0000417 ! primitive endoderm
intersection_of: part_of UBERON:0000087 ! inner cell mass

[Term]
id: UBERON:0003226
name: primitive endoderm of embryo
xref: EHDAA:79 ! primitive endoderm
intersection_of: UBERON:0000417 ! primitive endoderm
intersection_of: part_of UBERON:0000922 ! embryo


[Term]
id: UBERON:0003229
name: epithelium of elbow
xref: EHDAA:4168 ! epithelium
xref: EHDAA:6214 ! epithelium
intersection_of: UBERON:0000483 ! epithelium
intersection_of: part_of UBERON:0001461 ! elbow
xref: HOG:0001044 ! elbow epithelium

[Term]
id: UBERON:0003230
name: epithelium of carpal region
xref: EHDAA:5198 ! epithelium
intersection_of: UBERON:0000483 ! epithelium
intersection_of: part_of UBERON:0001462 ! wrist

[Term]
id: UBERON:0003231
name: epithelium of hip
xref: EHDAA:5155 ! epithelium
xref: EHDAA:6180 ! epithelium
intersection_of: UBERON:0000483 ! epithelium
intersection_of: part_of UBERON:0001464 ! hip
xref: HOG:0000779 ! hip epithelium

[Term]
id: UBERON:0003232
name: epithelium of knee
xref: EHDAA:5161 ! epithelium
xref: EHDAA:6186 ! epithelium
intersection_of: UBERON:0000483 ! epithelium
intersection_of: part_of UBERON:0001465 ! knee
xref: HOG:0000810 ! knee epithelium

[Term]
id: UBERON:0003233
name: epithelium of shoulder
xref: EHDAA:4182 ! epithelium
xref: EHDAA:6230 ! epithelium
intersection_of: UBERON:0000483 ! epithelium
intersection_of: part_of UBERON:0001467 ! shoulder
xref: HOG:0000761 ! shoulder epithelium

[Term]
id: UBERON:0003234
name: epithelium of nasal cavity
xref: EHDAA:6803 ! epithelium
intersection_of: UBERON:0000483 ! epithelium
intersection_of: part_of UBERON:0001707 ! nasal cavity

[Term]
id: UBERON:0003235
name: epithelium of upper jaw
xref: EHDAA:8027 ! epithelium
intersection_of: UBERON:0000483 ! epithelium
intersection_of: part_of UBERON:0001709 ! upper jaw

[Term]
id: UBERON:0003236
name: epithelium of lower jaw
xref: EHDAA:7999 ! epithelium
intersection_of: UBERON:0000483 ! epithelium
intersection_of: part_of UBERON:0001710 ! lower jaw
xref: HOG:0000802 ! lower jaw epithelium

[Term]
id: UBERON:0003238
name: epithelium of superior semicircular canal
xref: EHDAA:7806 ! epithelium
intersection_of: UBERON:0000483 ! epithelium
intersection_of: part_of UBERON:0001841 ! anterior semicircular canal

[Term]
id: UBERON:0003239
name: epithelium of posterior semicircular canal
xref: EHDAA:7800 ! epithelium
intersection_of: UBERON:0000483 ! epithelium
intersection_of: part_of UBERON:0001842 ! posterior semicircular canal

[Term]
id: UBERON:0003240
name: epithelium of lateral semicircular canal
xref: EHDAA:7794 ! epithelium
intersection_of: UBERON:0000483 ! epithelium
intersection_of: part_of UBERON:0001843 ! lateral semicircular canal

[Term]
id: UBERON:0003241
name: epithelium of utricle
xref: EHDAA:4730 ! epithelium
intersection_of: UBERON:0000483 ! epithelium
intersection_of: part_of UBERON:0001853 ! utricle of membranous labyrinth
xref: HOG:0000634 ! utricle epithelium

[Term]
id: UBERON:0003242
name: epithelium of saccule
xref: EHDAA:4724 ! epithelium
intersection_of: UBERON:0000483 ! epithelium
intersection_of: part_of UBERON:0001854 ! saccule of membranous labyrinth
xref: HOG:0000633 ! saccule epithelium

[Term]
id: UBERON:0003243
name: epithelium of cochlear duct
xref: EHDAA:4722 ! epithelium
intersection_of: UBERON:0000483 ! epithelium
intersection_of: part_of UBERON:0001855 ! cochlear duct of membranous labyrinth
xref: HOG:0000640 ! cochlear duct epithelium

[Term]
id: UBERON:0003244
name: epithelium of mammary gland
xref: EHDAA:6526 ! epithelium
intersection_of: UBERON:0000483 ! epithelium
intersection_of: part_of UBERON:0001911 ! lactiferous gland
xref: FMA:74445 ! Epithelium of lactiferous gland
xref: HOG:0001088 ! mammary gland epithelium

[Term]
id: UBERON:0003246
name: epithelium of endolymphatic sac
xref: EHDAA:7765 ! epithelium
intersection_of: UBERON:0000483 ! epithelium
intersection_of: part_of UBERON:0002223 ! endolymphatic sac

[Term]
id: UBERON:0003247
name: epithelium of forearm
xref: EHDAA:4174 ! epithelium
xref: EHDAA:6220 ! epithelium
intersection_of: UBERON:0000483 ! epithelium
intersection_of: part_of UBERON:0002386 ! forearm

[Term]
id: UBERON:0003248
name: epithelium of footplate
xref: EHDAA:5145 ! epithelium
xref: EHDAA:6144 ! epithelium
intersection_of: UBERON:0000483 ! epithelium
intersection_of: part_of UBERON:0002496 ! stapes base

[Term]
id: UBERON:0003249
name: epithelium of otic placode
xref: EHDAA:510 ! epithelium
intersection_of: UBERON:0000483 ! epithelium
intersection_of: part_of UBERON:0003069 ! otic placode
xref: HOG:0000636 ! otic placode epithelium


[Term]
id: UBERON:0003254
name: ectoderm of amnion
xref: EHDAA:138 ! ectoderm
intersection_of: UBERON:0000924 ! ectoderm
intersection_of: part_of UBERON:0000305 ! amnion

[Term]
id: UBERON:0003255
name: ectoderm of embryo
xref: EHDAA:132 ! ectoderm
intersection_of: UBERON:0000924 ! ectoderm
intersection_of: part_of UBERON:0000922 ! embryo

[Term]
id: UBERON:0003256
name: endoderm of embryo
xref: EHDAA:94 ! endoderm
intersection_of: UBERON:0000925 ! endoderm
intersection_of: part_of UBERON:0000922 ! embryo

[Term]
id: UBERON:0003257
name: endoderm of yolk sac
xref: EHDAA:166 ! endoderm
intersection_of: UBERON:0000925 ! endoderm
intersection_of: part_of UBERON:0001040 ! yolk sac

[Term]
id: UBERON:0003258
name: endoderm of foregut
xref: EHDAA:524 ! endoderm
intersection_of: UBERON:0000925 ! endoderm
intersection_of: part_of UBERON:0001041 ! foregut

[Term]
id: UBERON:0003259
name: endoderm of midgut
xref: EHDAA:987 ! endoderm
intersection_of: UBERON:0000925 ! endoderm
intersection_of: part_of UBERON:0001045 ! midgut

[Term]
id: UBERON:0003260
name: endoderm of hindgut
xref: EHDAA:979 ! endoderm
intersection_of: UBERON:0000925 ! endoderm
intersection_of: part_of UBERON:0001046 ! hindgut

[Term]
id: UBERON:0003261
name: endoderm of thyroid primordium
xref: EHDAA:956 ! endoderm
intersection_of: UBERON:0000925 ! endoderm
intersection_of: part_of UBERON:0003091 ! thyroid primordium

[Term]
id: UBERON:0003262
name: mesoderm of amnion
xref: EHDAA:140 ! mesoderm
intersection_of: UBERON:0000926 ! mesoderm
intersection_of: part_of UBERON:0000305 ! amnion

[Term]
id: UBERON:0003263
name: mesoderm of embryo
xref: EHDAA:183 ! mesoderm
intersection_of: UBERON:0000926 ! mesoderm
intersection_of: part_of UBERON:0000922 ! embryo

[Term]
id: UBERON:0003264
name: mesoderm of yolk sac
xref: EHDAA:168 ! mesoderm
intersection_of: UBERON:0000926 ! mesoderm
intersection_of: part_of UBERON:0001040 ! yolk sac

[Term]
id: UBERON:0003265
name: mesoderm of chorion
xref: EHDAA:154 ! mesoderm
intersection_of: UBERON:0000926 ! mesoderm
intersection_of: part_of UBERON:0003124 ! chorion

[Term]
id: UBERON:0003266
name: nerve of central nervous system
xref: EHDAA:2851 ! nerve
intersection_of: UBERON:0001021 ! nerve
intersection_of: part_of UBERON:0001017 ! central nervous system

[Term]
id: UBERON:0003267
name: tooth of upper jaw
namespace: file:/Users/cjm/cvs/obo/ontology/anatomy/anatomy_xp/uberon-xp-xref-ma.obo
xref: EHDAA:8045 ! tooth
xref: MA:0001909 ! upper jaw tooth
intersection_of: UBERON:0001091 ! tooth
intersection_of: part_of UBERON:0001709 ! upper jaw

[Term]
id: UBERON:0003268
name: tooth of lower jaw
namespace: file:/Users/cjm/cvs/obo/ontology/anatomy/anatomy_xp/uberon-xp-xref-ma.obo
xref: EHDAA:8009 ! tooth
xref: MA:0001907 ! lower jaw tooth
intersection_of: UBERON:0001091 ! tooth
intersection_of: part_of UBERON:0001710 ! lower jaw

[Term]
id: UBERON:0003269
name: skeletal muscle of eye
xref: EHDAA:2923 ! skeletal muscle
intersection_of: UBERON:0001134 ! skeletal muscle tissue
intersection_of: part_of UBERON:0000970 ! eye

[Term]
id: UBERON:0003270
name: skeletal muscle of leg
xref: EHDAA:8291 ! skeletal muscle
intersection_of: UBERON:0001134 ! skeletal muscle tissue
intersection_of: part_of UBERON:0000978 ! leg

[Term]
id: UBERON:0003271
name: skeletal muscle of pelvic girdle
xref: EHDAA:8326 ! skeletal muscle
intersection_of: UBERON:0001134 ! skeletal muscle tissue
intersection_of: part_of UBERON:0001271 ! pelvic girdle

[Term]
id: UBERON:0003272
name: skeletal muscle of arm
xref: EHDAA:8277 ! skeletal muscle
intersection_of: UBERON:0001134 ! skeletal muscle tissue
intersection_of: part_of UBERON:0001460 ! arm

[Term]
id: UBERON:0003273
name: skeletal muscle of tongue
xref: EHDAA:9146 ! skeletal muscle
intersection_of: UBERON:0001134 ! skeletal muscle tissue
intersection_of: part_of UBERON:0001723 ! tongue
xref: HOG:0001390 ! tongue skeletal muscle

[Term]
id: UBERON:0003274
name: mesothelium of omental bursa
xref: EHDAA:2339 ! mesothelium
intersection_of: UBERON:0001136 ! mesothelium
intersection_of: part_of UBERON:0001341 ! lesser sac

[Term]
id: UBERON:0003275
name: hepatic sinusoids of liver
xref: EHDAA:2199 ! hepatic sinusoids
intersection_of: UBERON:0001281 ! hepatic sinusoid
intersection_of: part_of UBERON:0002107 ! liver

[Term]
id: UBERON:0003276
name: skeleton of embryo
xref: EHDAA:5047 ! skeleton
intersection_of: UBERON:0001434 ! skeleton
intersection_of: part_of UBERON:0000922 ! embryo

[Term]
id: UBERON:0003277
name: skeleton of upper jaw
xref: EHDAA:8041 ! skeleton
intersection_of: UBERON:0000075 ! subdivision of skeleton
intersection_of: part_of UBERON:0001709 ! upper jaw

[Term]
id: UBERON:0003278
name: skeleton of lower jaw
xref: EHDAA:8005 ! skeleton
intersection_of: UBERON:0000075 ! subdivision of skeleton
intersection_of: part_of UBERON:0001710 ! lower jaw

[Term]
id: UBERON:0003279
name: endothelium of trachea
xref: EHDAA:3082 ! endothelium
intersection_of: UBERON:0001986 ! endothelium
intersection_of: part_of UBERON:0001005 ! trachea

[Term]
id: UBERON:0003280
name: endothelium of main bronchus
xref: EHDAA:3076 ! endothelium
intersection_of: UBERON:0001986 ! endothelium
intersection_of: part_of UBERON:0002182 ! main bronchus

[Term]
id: UBERON:0003281
name: mesentery of stomach
synonym: "stomach mesentery" EXACT [Obol:obol]
synonym: "mesogastium" EXACT [MA:0001617]
synonym: "mesogastrium" EXACT [http://www.vivo.colostate.edu/hbooks/pathphys/misc_topics/peritoneum.html]
xref: EHDAA:2999 ! mesentery
xref: MA:0001617 ! stomach mesentery
intersection_of: UBERON:0002095 ! mesentery
intersection_of: part_of UBERON:0000945 ! stomach

[Term]
id: UBERON:0003885
name: mesentery of uterus
synonym: "uterus mesentery" EXACT [Obol:obol]
synonym: "mesometrium" EXACT [http://www.vivo.colostate.edu/hbooks/pathphys/misc_topics/peritoneum.html, FMA:19816, MA:0002931]
xref: FMA:19816 ! mesometrium [subclass: "region of mesentery"]
xref: MA:0002931 ! mesometrium [part_of: "uterus"]
intersection_of: UBERON:0002095 ! mesentery
intersection_of: part_of UBERON:0000995 ! uterus

[Term]
id: UBERON:0003282
name: mesentery of heart
xref: EHDAA:432 ! mesentery
intersection_of: UBERON:0002095 ! mesentery
intersection_of: part_of UBERON:0000948 ! heart

[Term]
id: UBERON:0003283
name: mesentery of oesophagus
xref: EHDAA:2943 ! mesentery
intersection_of: UBERON:0002095 ! mesentery
intersection_of: part_of UBERON:0001043 ! esophagus

[Term]
id: UBERON:0003284
name: mesentery of midgut
xref: EHDAA:3031 ! mesentery
intersection_of: UBERON:0002095 ! mesentery
intersection_of: part_of UBERON:0001045 ! midgut

[Term]
id: UBERON:0003285
name: limb of embryo
xref: EHDAA:1697 ! limb
intersection_of: UBERON:0002101 ! limb
intersection_of: part_of UBERON:0000922 ! embryo

[Term]
id: UBERON:0003286
name: duodenum of foregut
xref: EHDAA:3830 ! duodenum
intersection_of: UBERON:0002114 ! duodenum
intersection_of: part_of UBERON:0001041 ! foregut

[Term]
id: UBERON:0003287
name: duodenum of midgut
xref: EHDAA:3937 ! duodenum
intersection_of: UBERON:0002114 ! duodenum
intersection_of: part_of UBERON:0001045 ! midgut

[Term]
id: UBERON:0003288
name: meninges of midbrain
namespace: file:/Users/cjm/cvs/obo/ontology/anatomy/anatomy_xp/uberon-xp-xref-ma.obo
xref: EHDAA:3708 ! meninges
xref: MA:0001058 ! midbrain meninges
intersection_of: UBERON:0002360 ! meninx
intersection_of: part_of UBERON:0001891 ! midbrain
xref: HOG:0000012 ! midbrain meninges

[Term]
id: UBERON:0003289
name: meninges of telencephalon
namespace: file:/Users/cjm/cvs/obo/ontology/anatomy/anatomy_xp/uberon-xp-xref-ma.obo
xref: EHDAA:5476 ! meninges
xref: MA:0000979 ! telencephalon meninges
intersection_of: UBERON:0002360 ! meninx
intersection_of: part_of UBERON:0001893 ! telencephalon
xref: HOG:0000010 ! telencephalon meninges

[Term]
id: UBERON:0003290
name: meninges of diencephalon
namespace: file:/Users/cjm/cvs/obo/ontology/anatomy/anatomy_xp/uberon-xp-xref-ma.obo
xref: EHDAA:5458 ! meninges
xref: MA:0000826 ! diencephalon meninges
intersection_of: UBERON:0002360 ! meninx
intersection_of: part_of UBERON:0001894 ! diencephalon
xref: HOG:0000009 ! diencephalon meninges

[Term]
id: UBERON:0003291
name: meninges of hindbrain
namespace: file:/Users/cjm/cvs/obo/ontology/anatomy/anatomy_xp/uberon-xp-xref-ma.obo
xref: EHDAA:3688 ! meninges
xref: MA:0000987 ! hindbrain meninges
intersection_of: UBERON:0002360 ! meninx
intersection_of: part_of UBERON:0002028 ! hindbrain
xref: HOG:0000011 ! hindbrain meninges

[Term]
id: UBERON:0003292
name: meninges of spinal cord
namespace: file:/Users/cjm/cvs/obo/ontology/anatomy/anatomy_xp/uberon-xp-xref-ma.obo
xref: EHDAA:2865 ! meninges
xref: MA:0001130 ! spinal cord meninges
intersection_of: UBERON:0002360 ! meninx
intersection_of: part_of UBERON:0002240 ! spinal cord
xref: HOG:0000443 ! spinal cord meninges

[Term]
id: UBERON:0003293
name: gland of oral region
xref: EHDAA:2181 ! gland
intersection_of: UBERON:0002530 ! gland
intersection_of: part_of UBERON:0000166 ! oral opening

[Term]
id: UBERON:0003294
name: gland of foregut
xref: EHDAA:950 ! gland
intersection_of: UBERON:0002530 ! gland
intersection_of: part_of UBERON:0001041 ! foregut

[Term]
id: UBERON:0003295
name: gland of pharynx
xref: EHDAA:2967 ! gland
intersection_of: UBERON:0002530 ! gland
intersection_of: part_of UBERON:0001042 ! pharynx

[Term]
id: UBERON:0003296
name: gland of diencephalon
xref: EHDAA:4475 ! gland
intersection_of: UBERON:0002530 ! gland
intersection_of: part_of UBERON:0001894 ! diencephalon

[Term]
id: UBERON:0003297
name: gland of integumental system
xref: EHDAA:6522 ! gland
intersection_of: UBERON:0002530 ! gland
intersection_of: part_of UBERON:0002416 ! integumental system

[Term]
id: UBERON:0003298
name: roof plate of neural tube
xref: EHDAA:2891 ! roof plate
xref: EHDAA:916 ! roof plate
xref: ZFA:0001436 ! roof plate neural tube
intersection_of: UBERON:0003054 ! roof plate
intersection_of: part_of UBERON:0001049 ! neural tube

[Term]
id: UBERON:0003299
name: roof plate of midbrain
xref: EHDAA:3712 ! roof plate
xref: ZFA:0000355 ! roof plate midbrain
intersection_of: UBERON:0003054 ! roof plate
intersection_of: part_of UBERON:0001891 ! midbrain

[Term]
id: UBERON:0003300
name: roof plate of telencephalon
xref: EHDAA:3512 ! roof plate
intersection_of: UBERON:0003054 ! roof plate
intersection_of: part_of UBERON:0001893 ! telencephalon

[Term]
id: UBERON:0003301
name: roof plate of diencephalon
xref: EHDAA:1979 ! roof plate
xref: EHDAA:2657 ! roof plate
xref: EHDAA:3494 ! roof plate
xref: ZFA:0001358 ! roof plate diencephalon
intersection_of: UBERON:0003054 ! roof plate
intersection_of: part_of UBERON:0001894 ! diencephalon

[Term]
id: UBERON:0003302
name: roof plate of metencephalon
xref: EHDAA:5524 ! roof plate
intersection_of: UBERON:0003054 ! roof plate
intersection_of: part_of UBERON:0001895 ! metencephalon

[Term]
id: UBERON:0003303
name: roof plate of medulla oblongata
xref: EHDAA:7614 ! roof plate
intersection_of: UBERON:0003054 ! roof plate
intersection_of: part_of UBERON:0001896 ! medulla oblongata

[Term]
id: UBERON:0003304
name: blood island of mesoderm
xref: EHDAA:170 ! blood island
intersection_of: UBERON:0003061 ! blood island
intersection_of: part_of UBERON:0000926 ! mesoderm

[Term]
id: UBERON:0003305
name: blood island of mesenchyme
xref: EHDAA:207 ! blood island
intersection_of: UBERON:0003061 ! blood island
intersection_of: part_of UBERON:0003104 ! mesenchyme

[Term]
id: UBERON:0003306
name: floor plate of neural tube
xref: EHDAA:2871 ! floor plate
xref: EHDAA:910 ! floor plate
xref: ZFA:0001434 ! floor plate neural tube
intersection_of: UBERON:0003079 ! floor plate
intersection_of: part_of UBERON:0001049 ! neural tube

[Term]
id: UBERON:0003307
name: floor plate of midbrain
xref: EHDAA:3698 ! floor plate
xref: ZFA:0001677 ! floor plate midbrain
intersection_of: UBERON:0003079 ! floor plate
intersection_of: part_of UBERON:0001891 ! midbrain

[Term]
id: UBERON:0003308
name: floor plate of telencephalon
xref: EHDAA:3498 ! floor plate
xref: ZFA:0000914 ! floor plate telencephalon
intersection_of: UBERON:0003079 ! floor plate
intersection_of: part_of UBERON:0001893 ! telencephalon

[Term]
id: UBERON:0003309
name: floor plate of diencephalon
xref: EHDAA:1975 ! floor plate
xref: EHDAA:2651 ! floor plate
xref: EHDAA:3480 ! floor plate
xref: ZFA:0000871 ! floor plate diencephalon
intersection_of: UBERON:0003079 ! floor plate
intersection_of: part_of UBERON:0001894 ! diencephalon

[Term]
id: UBERON:0003310
name: floor plate of metencephalon
xref: EHDAA:5500 ! floor plate
intersection_of: UBERON:0003079 ! floor plate
intersection_of: part_of UBERON:0001895 ! metencephalon

[Term]
id: UBERON:0003311
name: floor plate of medulla oblongata
xref: EHDAA:7590 ! floor plate
intersection_of: UBERON:0003079 ! floor plate
intersection_of: part_of UBERON:0001896 ! medulla oblongata

[Term]
id: UBERON:0003312
name: mesenchyme of testis
xref: EHDAA:8150 ! mesenchyme
intersection_of: UBERON:0003104 ! mesenchyme
intersection_of: part_of UBERON:0000473 ! testis
xref: HOG:0001442 ! testis mesenchyme

[Term]
id: UBERON:0003313
name: mesenchyme of embryo
xref: EHDAA:177 ! mesenchyme
intersection_of: UBERON:0003104 ! mesenchyme
intersection_of: part_of UBERON:0000922 ! embryo

[Term]
id: UBERON:0003314
name: mesenchyme of eye
xref: EHDAA:2910 ! mesenchyme
intersection_of: UBERON:0003104 ! mesenchyme
intersection_of: part_of UBERON:0000970 ! eye
xref: HOG:0001084 ! eye mesenchyme

[Term]
id: UBERON:0003315
name: mesenchyme of ovary
xref: EHDAA:8128 ! mesenchyme
intersection_of: UBERON:0003104 ! mesenchyme
intersection_of: part_of UBERON:0000992 ! ovary
xref: HOG:0001441 ! ovary mesenchyme

[Term]
id: UBERON:0003316
name: mesenchyme of yolk sac
xref: EHDAA:205 ! mesenchyme
intersection_of: UBERON:0003104 ! mesenchyme
intersection_of: part_of UBERON:0001040 ! yolk sac
xref: HOG:0000503 ! yolk sac mesenchyme

[Term]
id: UBERON:0003317
name: mesenchyme of incisor
xref: EHDAA:8015 ! mesenchyme
xref: EHDAA:8051 ! mesenchyme
intersection_of: UBERON:0003104 ! mesenchyme
intersection_of: part_of UBERON:0001098 ! incisor tooth

[Term]
id: UBERON:0003318
name: mesenchyme of elbow
xref: EHDAA:4170 ! mesenchyme
xref: EHDAA:6216 ! mesenchyme
intersection_of: UBERON:0003104 ! mesenchyme
intersection_of: part_of UBERON:0001461 ! elbow
xref: HOG:0001075 ! elbow mesenchyme

[Term]
id: UBERON:0003319
name: mesenchyme of carpal region
xref: EHDAA:5200 ! mesenchyme
intersection_of: UBERON:0003104 ! mesenchyme
intersection_of: part_of UBERON:0001462 ! wrist

[Term]
id: UBERON:0003320
name: mesenchyme of hip
xref: EHDAA:5157 ! mesenchyme
xref: EHDAA:6182 ! mesenchyme
intersection_of: UBERON:0003104 ! mesenchyme
intersection_of: part_of UBERON:0001464 ! hip
xref: HOG:0001029 ! hip mesenchyme

[Term]
id: UBERON:0003321
name: mesenchyme of knee
xref: EHDAA:5163 ! mesenchyme
xref: EHDAA:6188 ! mesenchyme
intersection_of: UBERON:0003104 ! mesenchyme
intersection_of: part_of UBERON:0001465 ! knee
xref: HOG:0001070 ! knee mesenchyme

[Term]
id: UBERON:0003322
name: mesenchyme of shoulder
xref: EHDAA:4184 ! mesenchyme
xref: EHDAA:6232 ! mesenchyme
intersection_of: UBERON:0003104 ! mesenchyme
intersection_of: part_of UBERON:0001467 ! shoulder
xref: HOG:0001035 ! shoulder mesenchyme

[Term]
id: UBERON:0003323
name: mesenchyme of upper jaw
xref: EHDAA:8031 ! mesenchyme
intersection_of: UBERON:0003104 ! mesenchyme
intersection_of: part_of UBERON:0001709 ! upper jaw
xref: HOG:0001099 ! upper jaw mesenchyme

[Term]
id: UBERON:0003324
name: mesenchyme of lower jaw
xref: EHDAA:8003 ! mesenchyme
intersection_of: UBERON:0003104 ! mesenchyme
intersection_of: part_of UBERON:0001710 ! lower jaw
xref: HOG:0001069 ! lower jaw mesenchyme

[Term]
id: UBERON:0003325
name: mesenchyme of pinna
xref: EHDAA:8981 ! mesenchyme
intersection_of: UBERON:0003104 ! mesenchyme
intersection_of: part_of UBERON:0001757 ! pinna
xref: HOG:0000747 ! pinna mesenchyme

[Term]
id: UBERON:0003326
name: mesenchyme of mammary gland
xref: EHDAA:6528 ! mesenchyme
intersection_of: UBERON:0003104 ! mesenchyme
intersection_of: part_of UBERON:0001911 ! lactiferous gland
xref: HOG:0001087 ! mammary gland mesenchyme

[Term]
id: UBERON:0003327
name: mesenchyme of forearm
xref: EHDAA:4176 ! mesenchyme
xref: EHDAA:6222 ! mesenchyme
intersection_of: UBERON:0003104 ! mesenchyme
intersection_of: part_of UBERON:0002386 ! forearm

[Term]
id: UBERON:0003328
name: mesenchyme of footplate
xref: EHDAA:5149 ! mesenchyme
xref: EHDAA:6172 ! mesenchyme
intersection_of: UBERON:0003104 ! mesenchyme
intersection_of: part_of UBERON:0002496 ! stapes base

[Term]
id: UBERON:0003329
name: submucosa of anal canal
xref: EMAPA:27535 ! submucosa
intersection_of: UBERON:0000009 ! submucosa
intersection_of: part_of UBERON:0000159 ! anal canal
xref: FMA:85399 ! Submucosa of anal canal

[Term]
id: UBERON:0003330
name: submucosa of rectum
xref: EMAPA:27083 ! submucosa
xref: EMAPA:27087 ! serosa
xref: EMAPA:27323 ! submucosa
xref: EMAPA:27331 ! serosa
intersection_of: UBERON:0000009 ! submucosa
intersection_of: part_of UBERON:0001052 ! rectum
xref: FMA:15034 ! Submucosa of rectum

[Term]
id: UBERON:0003331
name: submucosa of colon
xref: EMAPA:27379 ! submucosa
intersection_of: UBERON:0000009 ! submucosa
intersection_of: part_of UBERON:0001155 ! colon
xref: FMA:14985 ! Submucosa of colon

[Term]
id: UBERON:0003332
name: submucosa of duodenum
xref: EMAPA:27239 ! submucosa
intersection_of: UBERON:0000009 ! submucosa
intersection_of: part_of UBERON:0002114 ! duodenum
xref: FMA:14943 ! Submucosa of duodenum

[Term]
id: UBERON:0003333
name: submucosa of jejunum
xref: EMAPA:27111 ! submucosa
xref: EMAPA:27351 ! submucosa
intersection_of: UBERON:0000009 ! submucosa
intersection_of: part_of UBERON:0002115 ! jejunum
xref: FMA:14950 ! Submucosa of jejunum

[Term]
id: UBERON:0003334
name: serosa of rectum
xref: EMAPA:27087 ! serosa
xref: EMAPA:27331 ! serosa
intersection_of: UBERON:0000042 ! serous membrane
intersection_of: part_of UBERON:0001052 ! rectum
xref: FMA:15039 ! Serosa of rectum

[Term]
id: UBERON:0003335
name: serosa of colon
xref: EMAPA:27387 ! serosa
intersection_of: UBERON:0000042 ! serous membrane
intersection_of: part_of UBERON:0001155 ! colon
xref: FMA:14990 ! Serosa of colon

[Term]
id: UBERON:0003336
name: serosa of duodenum
xref: EMAPA:27247 ! serosa
intersection_of: UBERON:0000042 ! serous membrane
intersection_of: part_of UBERON:0002114 ! duodenum
xref: FMA:14948 ! Serosa of duodenum

[Term]
id: UBERON:0003337
name: serosa of jejunum
xref: EMAPA:27115 ! serosa
xref: EMAPA:27359 ! serosa
intersection_of: UBERON:0000042 ! serous membrane
intersection_of: part_of UBERON:0002115 ! jejunum
xref: FMA:14955 ! Serosa of jejunum

[Term]
id: UBERON:0003338
name: ganglion of peripheral nervous system
namespace: file:/Users/cjm/cvs/obo/ontology/anatomy/anatomy_xp/uberon-xp-xref-ma.obo
xref: EMAPA:18371 ! ganglion
xref: MA:0001161 ! peripheral nervous system ganglion
intersection_of: UBERON:0000045 ! ganglion
intersection_of: part_of UBERON:0000010 ! peripheral nervous system

[Term]
id: UBERON:0003339
name: ganglion of central nervous system
xref: EMAPA:16658 ! ganglion
intersection_of: UBERON:0000045 ! ganglion
intersection_of: part_of UBERON:0001017 ! central nervous system
xref: FMA:83843 ! Ganglion of neuraxis

[Term]
id: UBERON:0003340
name: urethra of urogenital sinus
xref: EMAPA:30891 ! urethra
intersection_of: UBERON:0000057 ! urethra
intersection_of: part_of UBERON:0000164 ! urogenital sinus

[Term]
id: UBERON:0003341
name: urethra of urinary system
xref: EMAPA:30901 ! urethra
intersection_of: UBERON:0000057 ! urethra
intersection_of: part_of UBERON:0001008 ! urinary system

[Term]
id: UBERON:0003342
name: mucosa of anal canal
xref: EMAPA:27531 ! mucosa
intersection_of: UBERON:0000344 ! mucosa
intersection_of: part_of UBERON:0000159 ! anal canal
xref: FMA:74654 ! Mucosa of anal canal

[Term]
id: UBERON:0003343
name: mucosa of oral region
xref: EMAPA:26937 ! mucosa
intersection_of: UBERON:0000344 ! mucosa
intersection_of: part_of UBERON:0000166 ! oral opening

[Term]
id: UBERON:0003344
name: mucosa of pharynx
xref: EMAPA:26957 ! mucosa
xref: EMAPA:26965 ! mucosa
intersection_of: UBERON:0000344 ! mucosa
intersection_of: part_of UBERON:0001042 ! pharynx

[Term]
id: UBERON:0003345
name: mucosa of oesophagus
xref: EMAPA:26981 ! mucosa
xref: EMAPA:26991 ! mucosa
intersection_of: UBERON:0000344 ! mucosa
intersection_of: part_of UBERON:0001043 ! esophagus

[Term]
id: UBERON:0003346
name: mucosa of rectum
xref: EMAPA:27081 ! mucosa
xref: EMAPA:27319 ! mucosa
intersection_of: UBERON:0000344 ! mucosa
intersection_of: part_of UBERON:0001052 ! rectum
xref: FMA:15033 ! Mucosa of rectum

[Term]
id: UBERON:0003347
name: mucosa of colon
xref: EMAPA:27375 ! mucosa
intersection_of: UBERON:0000344 ! mucosa
intersection_of: part_of UBERON:0001155 ! colon

[Term]
id: UBERON:0003348
name: mucosa of duodenum
xref: EMAPA:27235 ! mucosa
intersection_of: UBERON:0000344 ! mucosa
intersection_of: part_of UBERON:0002114 ! duodenum

[Term]
id: UBERON:0003349
name: mucosa of jejunum
xref: EMAPA:27109 ! mucosa
xref: EMAPA:27347 ! mucosa
intersection_of: UBERON:0000344 ! mucosa
intersection_of: part_of UBERON:0002115 ! jejunum

[Term]
id: UBERON:0003350
name: epithelium of mucosa
xref: EMAPA:18668 ! epithelium
xref: EMAPA:18835 ! epithelium
xref: EMAPA:18857 ! epithelium
xref: EMAPA:18862 ! epithelium
xref: EMAPA:18868 ! epithelium
xref: EMAPA:18893 ! epithelium
xref: EMAPA:18899 ! epithelium
xref: EMAPA:18912 ! epithelium
xref: EMAPA:18917 ! epithelium
xref: EMAPA:18927 ! epithelium
xref: EMAPA:18934 ! epithelium
xref: EMAPA:18941 ! epithelium
xref: EMAPA:19078 ! epithelium
xref: EMAPA:26961 ! epithelium
xref: EMAPA:26985 ! epithelium
xref: EMAPA:27019 ! epithelium
xref: EMAPA:27033 ! epithelium
xref: EMAPA:27047 ! epithelium
xref: EMAPA:27061 ! epithelium
xref: EMAPA:27075 ! epithelium
xref: EMAPA:27089 ! epithelium
xref: EMAPA:27103 ! epithelium
xref: EMAPA:27131 ! epithelium
xref: EMAPA:27145 ! epithelium
xref: EMAPA:27159 ! epithelium
xref: EMAPA:27175 ! epithelium
xref: EMAPA:27191 ! epithelium
xref: EMAPA:27207 ! epithelium
xref: EMAPA:27219 ! epithelium
xref: EMAPA:27229 ! epithelium
xref: EMAPA:27307 ! epithelium
intersection_of: UBERON:0000483 ! epithelium
intersection_of: part_of UBERON:0000344 ! mucosa

[Term]
id: UBERON:0003351
name: epithelium of pharynx
xref: EMAPA:16708 ! epithelium
xref: ZFA:0001174 ! pharyngeal epithelium
intersection_of: UBERON:0000483 ! epithelium
intersection_of: part_of UBERON:0001042 ! pharynx

[Term]
id: UBERON:0003352
name: epithelium of midgut
xref: EMAPA:16569 ! epithelium
intersection_of: UBERON:0000483 ! epithelium
intersection_of: part_of UBERON:0001045 ! midgut

[Term]
id: UBERON:0003353
name: epithelium of hindgut
xref: EMAPA:16717 ! epithelium
intersection_of: UBERON:0000483 ! epithelium
intersection_of: part_of UBERON:0001046 ! hindgut

[Term]
id: UBERON:0003354
name: epithelium of rectum
xref: EMAPA:17898 ! epithelium
intersection_of: UBERON:0000483 ! epithelium
intersection_of: part_of UBERON:0001052 ! rectum
xref: FMA:17510 ! Epithelium of rectum
xref: HOG:0001037 ! rectum epithelium

[Term]
id: UBERON:0003355
name: epithelium of incisor
xref: EMAPA:17919 ! epithelium
xref: EMAPA:17940 ! epithelium
intersection_of: UBERON:0000483 ! epithelium
intersection_of: part_of UBERON:0001098 ! incisor tooth

[Term]
id: UBERON:0003356
name: epithelium of nasal septum
xref: EMAPA:18442 ! epithelium
intersection_of: UBERON:0000483 ! epithelium
intersection_of: part_of UBERON:0001706 ! nasal septum

[Term]
id: UBERON:0003357
name: epithelium of tongue
xref: EMAPA:17881 ! epithelium
xref: EMAPA:18872 ! epithelium
intersection_of: UBERON:0000483 ! epithelium
intersection_of: part_of UBERON:0001723 ! tongue

[Term]
id: UBERON:0003358
name: epithelium of soft palate
xref: EMAPA:18950 ! epithelium
intersection_of: UBERON:0000483 ! epithelium
intersection_of: part_of UBERON:0001733 ! soft palate

[Term]
id: UBERON:0003359
name: epithelium of submandibular gland
xref: EMAPA:18813 ! epithelium
intersection_of: UBERON:0000483 ! epithelium
intersection_of: part_of UBERON:0001736 ! submandibular gland
xref: HOG:0000989 ! submandibular gland epithelium

[Term]
id: UBERON:0003360
name: epithelium of parotid
xref: EMAPA:18538 ! epithelium
intersection_of: UBERON:0000483 ! epithelium
intersection_of: part_of UBERON:0001831 ! parotid gland
xref: HOG:0001434 ! parotid gland epithelium

[Term]
id: UBERON:0003361
name: epithelium of sublingual gland
xref: EMAPA:18810 ! epithelium
intersection_of: UBERON:0000483 ! epithelium
intersection_of: part_of UBERON:0001832 ! sublingual gland
xref: HOG:0001098 ! sublingual gland epithelium

[Term]
id: UBERON:0003362
name: epithelium of endolymphatic duct
xref: EMAPA:18582 ! epithelium
intersection_of: UBERON:0000483 ! epithelium
intersection_of: part_of UBERON:0001860 ! endolymphatic duct

[Term]
id: UBERON:0003363
name: epithelium of ductus reuniens
xref: EMAPA:17289 ! epithelium
intersection_of: UBERON:0000483 ! epithelium
intersection_of: part_of UBERON:0001861 ! ductus reuniens

[Term]
id: UBERON:0003364
name: epithelium of right lung
xref: EMAPA:17663 ! epithelium
intersection_of: UBERON:0000483 ! epithelium
intersection_of: part_of UBERON:0002167 ! right lung

[Term]
id: UBERON:0003365
name: epithelium of left lung
xref: EMAPA:17655 ! epithelium
intersection_of: UBERON:0000483 ! epithelium
intersection_of: part_of UBERON:0002168 ! left lung

[Term]
id: UBERON:0003366
name: epithelium of uterine horn
xref: EMAPA:29030 ! epithelium
intersection_of: UBERON:0000483 ! epithelium
intersection_of: part_of UBERON:0002247 ! uterine horn

[Term]
id: UBERON:0003367
name: epithelium of vomeronasal organ
xref: EMAPA:18444 ! epithelium
intersection_of: UBERON:0000483 ! epithelium
intersection_of: part_of UBERON:0002255 ! vomeronasal organ

[Term]
id: UBERON:0003368
name: epithelium of hard palate
xref: EMAPA:18953 ! epithelium
intersection_of: UBERON:0000483 ! epithelium
intersection_of: part_of UBERON:0003216 ! hard palate

[Term]
id: UBERON:0003371
name: ectoderm of leg
xref: EMAPA:17254 ! ectoderm
intersection_of: UBERON:0000924 ! ectoderm
intersection_of: part_of UBERON:0000978 ! leg

[Term]
id: UBERON:0003372
name: ectoderm of arm
xref: EMAPA:17243 ! ectoderm
intersection_of: UBERON:0000924 ! ectoderm
intersection_of: part_of UBERON:0001460 ! arm

[Term]
id: UBERON:0003373
name: ectoderm of footplate
xref: EMAPA:17250 ! ectoderm
intersection_of: UBERON:0000924 ! ectoderm
intersection_of: part_of UBERON:0002496 ! stapes base

[Term]
id: UBERON:0003374
name: ectoderm of chorion
xref: EMAPA:16113 ! ectoderm
intersection_of: UBERON:0000924 ! ectoderm
intersection_of: part_of UBERON:0003124 ! chorion

[Term]
id: UBERON:0003375
name: smooth muscle of eye
xref: EMAPA:18807 ! smooth muscle
intersection_of: UBERON:0000953 ! visceral muscle
intersection_of: part_of UBERON:0000970 ! eye

[Term]
id: UBERON:0003376
name: smooth muscle of trachea
xref: EMAPA:19192 ! smooth muscle
intersection_of: UBERON:0000953 ! visceral muscle
intersection_of: part_of UBERON:0001005 ! trachea
xref: FMA:262010 ! Smooth muscle of trachea

[Term]
id: UBERON:0003377
name: nerve of peripheral nervous system
xref: EMAPA:25148 ! nerve
intersection_of: UBERON:0001021 ! nerve
intersection_of: part_of UBERON:0000010 ! peripheral nervous system

[Term]
id: UBERON:0003378
name: cardiac muscle of auricular region
xref: EMAPA:17318 ! cardiac muscle
xref: EMAPA:17324 ! cardiac muscle
intersection_of: UBERON:0001133 ! cardiac muscle tissue
intersection_of: part_of UBERON:0001691 ! external ear

[Term]
id: UBERON:0003379
name: cardiac muscle of right atrium
xref: EMAPA:17326 ! cardiac muscle
intersection_of: UBERON:0001133 ! cardiac muscle tissue
intersection_of: part_of UBERON:0002078 ! right atrium
xref: FMA:7282 ! Cardiac muscle tissue of right atrium

[Term]
id: UBERON:0003380
name: cardiac muscle of left atrium
xref: EMAPA:17320 ! cardiac muscle
intersection_of: UBERON:0001133 ! cardiac muscle tissue
intersection_of: part_of UBERON:0002079 ! left atrium
xref: FMA:7285 ! Cardiac muscle tissue of left atrium

[Term]
id: UBERON:0003381
name: cardiac muscle of right ventricle
xref: EMAPA:17342 ! cardiac muscle
intersection_of: UBERON:0001133 ! cardiac muscle tissue
intersection_of: part_of UBERON:0002080 ! right ventricle
xref: FMA:83452 ! Cardiac muscle tissue of right ventricle

[Term]
id: UBERON:0003382
name: cardiac muscle of left ventricle
xref: EMAPA:17339 ! cardiac muscle
intersection_of: UBERON:0001133 ! cardiac muscle tissue
intersection_of: part_of UBERON:0002084 ! left ventricle
xref: FMA:83453 ! Cardiac muscle tissue of left ventricle

[Term]
id: UBERON:0003383
name: cardiac muscle of interventricular septum
xref: EMAPA:17335 ! cardiac muscle
intersection_of: UBERON:0001133 ! cardiac muscle tissue
intersection_of: part_of UBERON:0002094 ! interventricular septum
xref: FMA:84084 ! Cardiac muscle tissue of interventricular septum

[Term]
id: UBERON:0003384
name: skeletal muscle of pharynx
xref: EMAPA:18963 ! skeletal muscle
intersection_of: UBERON:0001134 ! skeletal muscle tissue
intersection_of: part_of UBERON:0001042 ! pharynx

[Term]
id: UBERON:0003385
name: skeletal muscle of mesenchyme
xref: EMAPA:19066 ! skeletal muscle
xref: EMAPA:19071 ! skeletal muscle
intersection_of: UBERON:0001134 ! skeletal muscle tissue
intersection_of: part_of UBERON:0003104 ! mesenchyme

[Term]
id: UBERON:0003386
name: smooth muscle of eye
xref: EMAPA:18807 ! smooth muscle
intersection_of: UBERON:0001135 ! smooth muscle tissue
intersection_of: part_of UBERON:0000970 ! eye

[Term]
id: UBERON:0003387
name: smooth muscle of trachea
xref: EMAPA:19192 ! smooth muscle
intersection_of: UBERON:0001135 ! smooth muscle tissue
intersection_of: part_of UBERON:0001005 ! trachea
xref: FMA:262010 ! Smooth muscle of trachea

[Term]
id: UBERON:0003388
name: mesothelium of pericardial cavity
xref: EMAPA:18449 ! mesothelium
intersection_of: UBERON:0001136 ! mesothelium
intersection_of: part_of UBERON:0001074 ! pericardial cavity

[Term]
id: UBERON:0003389
name: mesothelium of diaphragm
xref: EMAPA:18429 ! mesothelium
intersection_of: UBERON:0001136 ! mesothelium
intersection_of: part_of UBERON:0001103 ! diaphragm

[Term]
id: UBERON:0003390
name: mesothelium of pleural cavity
xref: EMAPA:18463 ! mesothelium
intersection_of: UBERON:0001136 ! mesothelium
intersection_of: part_of UBERON:0002402 ! pleural cavity

[Term]
id: UBERON:0003391
name: lip of upper jaw
xref: EMAPA:17925 ! lip
intersection_of: UBERON:0001833 ! lip
intersection_of: part_of UBERON:0001709 ! upper jaw

[Term]
id: UBERON:0003392
name: lip of lower jaw
xref: EMAPA:17909 ! lip
intersection_of: UBERON:0001833 ! lip
intersection_of: part_of UBERON:0001710 ! lower jaw

[Term]
id: UBERON:0003393
name: mesentery of urinary system
xref: EMAPA:17367 ! mesentery
intersection_of: UBERON:0002095 ! mesentery
intersection_of: part_of UBERON:0001008 ! urinary system

[Term]
id: UBERON:0003394
name: mesentery of hindgut
xref: EMAPA:16718 ! mesentery
intersection_of: UBERON:0002095 ! mesentery
intersection_of: part_of UBERON:0001046 ! hindgut

[Term]
id: UBERON:0003395
name: mesentery of rectum
xref: EMAPA:18664 ! mesentery
xref: EMAPA:18929 ! mesentery
intersection_of: UBERON:0002095 ! mesentery
intersection_of: part_of UBERON:0001052 ! rectum

[Term]
id: UBERON:0003396
name: mesentery of colon
xref: EMAPA:18942 ! mesentery
intersection_of: UBERON:0002095 ! mesentery
intersection_of: part_of UBERON:0001155 ! colon
xref: FMA:14645 ! Mesentery of large intestine

[Term]
id: UBERON:0003397
name: mesentery of duodenum
xref: EMAPA:19081 ! mesentery
intersection_of: UBERON:0002095 ! mesentery
intersection_of: part_of UBERON:0002114 ! duodenum

[Term]
id: UBERON:0003398
name: mesentery of jejunum
synonym: "jejunal mesentery" EXACT []
synonym: "jejunum mesentery" EXACT []
synonym: "mesojejunum" EXACT [http://www.vivo.colostate.edu/hbooks/pathphys/misc_topics/peritoneum.html]
xref: EMAPA:18670 ! mesentery
xref: EMAPA:18937 ! mesentery
intersection_of: UBERON:0002095 ! mesentery
intersection_of: part_of UBERON:0002115 ! jejunum
xref: FMA:14651 ! Mesentery of jejunum

[Term]
id: UBERON:0003399
name: skin of elbow
xref: EMAPA:18051 ! skin
intersection_of: UBERON:0002097 ! skin
intersection_of: part_of UBERON:0001461 ! elbow

[Term]
id: UBERON:0003400
name: skin of hip
xref: EMAPA:18148 ! skin
intersection_of: UBERON:0002097 ! skin
intersection_of: part_of UBERON:0001464 ! hip

[Term]
id: UBERON:0003401
name: skin of knee
xref: EMAPA:18151 ! skin
intersection_of: UBERON:0002097 ! skin
intersection_of: part_of UBERON:0001465 ! knee

[Term]
id: UBERON:0003402
name: skin of shoulder
xref: EMAPA:18059 ! skin
intersection_of: UBERON:0002097 ! skin
intersection_of: part_of UBERON:0001467 ! shoulder

[Term]
id: UBERON:0003403
name: skin of forearm
xref: EMAPA:18056 ! skin
intersection_of: UBERON:0002097 ! skin
intersection_of: part_of UBERON:0002386 ! forearm
xref: FMA:38265 ! Skin of forearm

[Term]
id: UBERON:0003404
name: lobar bronchus of right lung
xref: EMAPA:17664 ! lobar bronchus
intersection_of: UBERON:0002183 ! lobar bronchus
intersection_of: part_of UBERON:0002167 ! right lung

[Term]
id: UBERON:0003405
name: lobar bronchus of left lung
xref: EMAPA:17656 ! lobar bronchus
intersection_of: UBERON:0002183 ! lobar bronchus
intersection_of: part_of UBERON:0002168 ! left lung

[Term]
id: UBERON:0003406
name: cartilage of respiratory system
namespace: file:/Users/cjm/cvs/obo/ontology/anatomy/anatomy_xp/uberon-xp-xref-ma.obo
xref: EMAPA:18694 ! cartilage
xref: MA:0001818 ! respiratory system cartilage
intersection_of: UBERON:0002418 ! cartilage
intersection_of: part_of UBERON:0001004 ! respiratory system

[Term]
id: UBERON:0003407
name: cartilage of nasal septum
xref: EMAPA:25091 ! cartilage
intersection_of: UBERON:0002418 ! cartilage
intersection_of: part_of UBERON:0001706 ! nasal septum

[Term]
id: UBERON:0003408
name: gland of gut
xref: EMAPA:18815 ! gland
intersection_of: UBERON:0002530 ! gland
intersection_of: part_of UBERON:0001555 ! gut

[Term]
id: UBERON:0003409
name: gland of tongue
xref: EMAPA:25097 ! gland
intersection_of: UBERON:0002530 ! gland
intersection_of: part_of UBERON:0001723 ! tongue

[Term]
id: UBERON:0003410
name: gland of oropharynx
xref: EMAPA:25095 ! gland
intersection_of: UBERON:0002530 ! gland
intersection_of: part_of UBERON:0001729 ! oropharynx

[Term]
id: UBERON:0003411
name: mesenchyme of amnion
xref: EMAPA:16265 ! mesenchyme
intersection_of: UBERON:0003104 ! mesenchyme
intersection_of: part_of UBERON:0000305 ! amnion

[Term]
id: UBERON:0003412
name: mesenchyme of leg
xref: EMAPA:17255 ! mesenchyme
intersection_of: UBERON:0003104 ! mesenchyme
intersection_of: part_of UBERON:0000978 ! leg

[Term]
id: UBERON:0003413
name: mesenchyme of arm
xref: EMAPA:17244 ! mesenchyme
intersection_of: UBERON:0003104 ! mesenchyme
intersection_of: part_of UBERON:0001460 ! arm

[Term]
id: UBERON:0003414
name: mesenchyme of mandible
xref: EMAPA:17912 ! mesenchyme
intersection_of: UBERON:0003104 ! mesenchyme
intersection_of: part_of UBERON:0001684 ! mandible

[Term]
id: UBERON:0003415
name: mesenchyme of nasal septum
xref: EMAPA:18443 ! mesenchyme
intersection_of: UBERON:0003104 ! mesenchyme
intersection_of: part_of UBERON:0001706 ! nasal septum

[Term]
id: UBERON:0003416
name: mesenchyme of tongue
xref: EMAPA:17882 ! mesenchyme
xref: EMAPA:18878 ! mesenchyme
intersection_of: UBERON:0003104 ! mesenchyme
intersection_of: part_of UBERON:0001723 ! tongue

[Term]
id: UBERON:0003417
name: mesenchyme of soft palate
xref: EMAPA:18951 ! mesenchyme
intersection_of: UBERON:0003104 ! mesenchyme
intersection_of: part_of UBERON:0001733 ! soft palate

[Term]
id: UBERON:0003418
name: mesenchyme of submandibular gland
xref: EMAPA:18814 ! mesenchyme
intersection_of: UBERON:0003104 ! mesenchyme
intersection_of: part_of UBERON:0001736 ! submandibular gland
xref: HOG:0001110 ! submandibular gland mesenchyme

[Term]
id: UBERON:0003419
name: mesenchyme of parotid
xref: EMAPA:18539 ! mesenchyme
intersection_of: UBERON:0003104 ! mesenchyme
intersection_of: part_of UBERON:0001831 ! parotid gland
xref: HOG:0001435 ! parotid gland mesenchyme

[Term]
id: UBERON:0003420
name: mesenchyme of sublingual gland
xref: EMAPA:18811 ! mesenchyme
intersection_of: UBERON:0003104 ! mesenchyme
intersection_of: part_of UBERON:0001832 ! sublingual gland
xref: HOG:0001106 ! sublingual gland mesenchyme

[Term]
id: UBERON:0003421
name: mesenchyme of vomeronasal organ
xref: EMAPA:18445 ! mesenchyme
intersection_of: UBERON:0003104 ! mesenchyme
intersection_of: part_of UBERON:0002255 ! vomeronasal organ

[Term]
id: UBERON:0003422
name: mesenchyme of umbilical cord
xref: EMAPA:26127 ! mesenchyme
intersection_of: UBERON:0003104 ! mesenchyme
intersection_of: part_of UBERON:0002331 ! umbilical cord

[Term]
id: UBERON:0003423
name: mesenchyme of chorion
xref: EMAPA:16266 ! mesenchyme
intersection_of: UBERON:0003104 ! mesenchyme
intersection_of: part_of UBERON:0003124 ! chorion

[Term]
id: UBERON:0003424
name: mesenchyme of hard palate
xref: EMAPA:18954 ! mesenchyme
intersection_of: UBERON:0003104 ! mesenchyme
intersection_of: part_of UBERON:0003216 ! hard palate

[Term]
id: UBERON:0003425
name: renal lymph node
xref: MA:0002882 ! renal lymph node
intersection_of: UBERON:0000029 ! lymph node
intersection_of: part_of UBERON:0002113 ! kidney

[Term]
id: UBERON:0003426
name: dermis adipose tissue
xref: MA:0000798 ! dermis adipose tissue
intersection_of: UBERON:0001013 ! adipose tissue
intersection_of: part_of UBERON:0002067 ! dermis

[Term]
id: UBERON:0003427
name: abdominal fat pad
xref: MA:0000472 ! abdominal fat pad
intersection_of: UBERON:0001014 ! fat body
intersection_of: part_of UBERON:0000916 ! abdomen

[Term]
id: UBERON:0003428
name: gonadal fat pad
xref: MA:0002547 ! gonadal fat pad
intersection_of: UBERON:0001014 ! fat body
intersection_of: part_of UBERON:0000991 ! gonad

[Term]
id: UBERON:0003429
name: abdomen nerve
xref: MA:0000521 ! abdomen nerve
intersection_of: UBERON:0001021 ! nerve
intersection_of: part_of UBERON:0000916 ! abdomen

[Term]
id: UBERON:0003430
name: neck nerve
xref: MA:0000588 ! neck nerve
intersection_of: UBERON:0001021 ! nerve
intersection_of: part_of UBERON:0000974 ! neck

[Term]
id: UBERON:0003431
name: leg nerve
xref: MA:0000673 ! leg nerve
intersection_of: UBERON:0001021 ! nerve
intersection_of: part_of UBERON:0000978 ! leg

[Term]
id: UBERON:0003432
name: chest nerve
xref: MA:0000551 ! chest nerve
intersection_of: UBERON:0001021 ! nerve
intersection_of: part_of UBERON:0001443 ! chest

[Term]
id: UBERON:0003433
name: arm nerve
xref: MA:0000595 ! arm nerve
intersection_of: UBERON:0001021 ! nerve
intersection_of: part_of UBERON:0001460 ! arm

[Term]
id: UBERON:0003434
name: wrist nerve
xref: MA:0000637 ! wrist nerve
intersection_of: UBERON:0001021 ! nerve
intersection_of: part_of UBERON:0001462 ! wrist

[Term]
id: UBERON:0003435
name: foot digit nerve
xref: MA:0000649 ! foot digit nerve
intersection_of: UBERON:0001021 ! nerve
intersection_of: part_of UBERON:0001466 ! toe

[Term]
id: UBERON:0003436
name: shoulder nerve
xref: MA:0000634 ! shoulder nerve
intersection_of: UBERON:0001021 ! nerve
intersection_of: part_of UBERON:0001467 ! shoulder

[Term]
id: UBERON:0003437
name: eyelid nerve
xref: MA:0001255 ! eyelid nerve
intersection_of: UBERON:0001021 ! nerve
intersection_of: part_of UBERON:0001711 ! eyelid

[Term]
id: UBERON:0003438
name: iris nerve
xref: MA:0001291 ! iris nerve
intersection_of: UBERON:0001021 ! nerve
intersection_of: part_of UBERON:0001769 ! iris

[Term]
id: UBERON:0003439
name: trunk nerve
xref: MA:0000515 ! trunk nerve
intersection_of: UBERON:0001021 ! nerve
intersection_of: part_of UBERON:0002100 ! trunk

[Term]
id: UBERON:0003440
name: limb nerve
xref: MA:0000693 ! limb nerve
intersection_of: UBERON:0001021 ! nerve
intersection_of: part_of UBERON:0002101 ! limb

[Term]
id: UBERON:0003441
name: forelimb nerve
xref: MA:0000616 ! forelimb nerve
intersection_of: UBERON:0001021 ! nerve
intersection_of: part_of UBERON:0002102 ! forelimb

[Term]
id: UBERON:0003442
name: hindlimb nerve
xref: MA:0000664 ! hindlimb nerve
intersection_of: UBERON:0001021 ! nerve
intersection_of: part_of UBERON:0002103 ! hindlimb

[Term]
id: UBERON:0003443
name: thoracic cavity nerve
xref: MA:0000556 ! thoracic cavity nerve
intersection_of: UBERON:0001021 ! nerve
intersection_of: part_of UBERON:0002224 ! thoracic cavity

[Term]
id: UBERON:0003444
name: pelvis nerve
xref: MA:0000542 ! pelvis nerve
intersection_of: UBERON:0001021 ! nerve
intersection_of: part_of UBERON:0002355 ! pelvis

[Term]
id: UBERON:0003445
name: foot nerve
xref: MA:0000653 ! foot nerve
intersection_of: UBERON:0001021 ! nerve
intersection_of: part_of UBERON:0002387 ! foot

[Term]
id: UBERON:0003446
name: ankle nerve
xref: MA:0000640 ! ankle nerve
intersection_of: UBERON:0001021 ! nerve
intersection_of: part_of UBERON:0002388 ! ankle

[Term]
id: UBERON:0003447
name: hand digit nerve
xref: MA:0000625 ! hand digit nerve
intersection_of: UBERON:0001021 ! nerve
intersection_of: part_of UBERON:0002389 ! finger

[Term]
id: UBERON:0003448
name: hand nerve
xref: MA:0000629 ! hand nerve
intersection_of: UBERON:0001021 ! nerve
intersection_of: part_of UBERON:0002398 ! hand

[Term]
id: UBERON:0003449
name: tail intervertebral disc
xref: MA:0000698 ! tail intervertebral disc
intersection_of: UBERON:0001066 ! intervertebral disk
intersection_of: part_of UBERON:0002415 ! tail

[Term]
id: UBERON:0003450
name: upper jaw incisor
xref: MA:0001601 ! upper jaw incisor
intersection_of: UBERON:0001098 ! incisor tooth
intersection_of: part_of UBERON:0001709 ! upper jaw
xref: ncithesaurus:Upper_Jaw_Incisor ! Upper Jaw Incisor

[Term]
id: UBERON:0003451
name: lower jaw incisor
xref: MA:0001600 ! lower jaw incisor
intersection_of: UBERON:0001098 ! incisor tooth
intersection_of: part_of UBERON:0001710 ! lower jaw
xref: ncithesaurus:Lower_Jaw_Incisor ! Lower Jaw Incisor

[Term]
id: UBERON:0003452
name: trabecula carnea cardiac muscle tissue
xref: MA:0002833 ! trabecula carnea cardiac muscle tissue
intersection_of: UBERON:0001133 ! cardiac muscle tissue
intersection_of: part_of UBERON:0002511 ! trabecula carnea
xref: FMA:84428 ! Cardiac muscle tissue of trabecula carnea

[Term]
id: UBERON:0003453
name: large intestine peyer's patch
xref: MA:0001550 ! large intestine peyer's patch
intersection_of: UBERON:0001211 ! aggregated lymphoid follicle of small intestine
intersection_of: part_of UBERON:0001155 ! colon

[Term]
id: UBERON:0003454
name: small intestine peyer's patch
xref: MA:0001557 ! small intestine peyer's patch
intersection_of: UBERON:0001211 ! aggregated lymphoid follicle of small intestine
intersection_of: part_of UBERON:0002108 ! small intestine

[Term]
id: UBERON:0003455
name: inner renal medulla loop of henle
xref: MA:0002623 ! inner renal medulla loop of henle
intersection_of: UBERON:0001288 ! loop of Henle
intersection_of: part_of UBERON:0001294 ! inner medulla of kidney

[Term]
id: UBERON:0003456
name: respiratory system lymphatic vessel
xref: MA:0001824 ! respiratory system lymphatic vessel
intersection_of: UBERON:0001473 ! lymphatic vessel
intersection_of: part_of UBERON:0001004 ! respiratory system

[Term]
id: UBERON:0003457
name: head bone
xref: MA:0000576 ! head bone
intersection_of: UBERON:0001474 ! bone
intersection_of: part_of UBERON:0000033 ! head

[Term]
id: UBERON:0003458
name: neck bone
xref: MA:0000584 ! neck bone
intersection_of: UBERON:0001474 ! bone
intersection_of: part_of UBERON:0000974 ! neck

[Term]
id: UBERON:0003459
name: chest bone
xref: MA:0000547 ! chest bone
intersection_of: UBERON:0001474 ! bone
intersection_of: part_of UBERON:0001443 ! chest

[Term]
id: UBERON:0003460
name: arm bone
xref: MA:0000592 ! arm bone
intersection_of: UBERON:0001474 ! bone
intersection_of: part_of UBERON:0001460 ! arm

[Term]
id: UBERON:0003461
name: shoulder bone
xref: MA:0000631 ! shoulder bone
intersection_of: UBERON:0001474 ! bone
intersection_of: part_of UBERON:0001467 ! shoulder

[Term]
id: UBERON:0003462
name: viscerocranium bone
xref: MA:0001482 ! viscerocranium bone
intersection_of: UBERON:0001474 ! bone
intersection_of: part_of UBERON:0001704 ! viscerocranium

[Term]
id: UBERON:0003463
name: trunk bone
xref: MA:0000512 ! trunk bone
intersection_of: UBERON:0001474 ! bone
intersection_of: part_of UBERON:0002100 ! trunk

[Term]
id: UBERON:0003464
name: hindlimb bone
xref: MA:0000660 ! hindlimb bone
intersection_of: UBERON:0001474 ! bone
intersection_of: part_of UBERON:0002103 ! hindlimb

[Term]
id: UBERON:0003465
name: chondrocranium bone
xref: MA:0001478 ! chondrocranium bone
intersection_of: UBERON:0001474 ! bone
intersection_of: part_of UBERON:0002241 ! chondrocranium

[Term]
id: UBERON:0003466
name: lower arm bone
xref: MA:0000598 ! lower arm bone
intersection_of: UBERON:0001474 ! bone
intersection_of: part_of UBERON:0002386 ! forearm

[Term]
id: UBERON:0003467
name: sesamoid bone of gastrocnemius
xref: MA:0001378 ! sesamoid bone of gastrocnemius
intersection_of: UBERON:0001479 ! sesamoid bone
intersection_of: part_of UBERON:0001388 ! gastrocnemius

[Term]
id: UBERON:0003468
name: ureteric artery
xref: MA:0002074 ! ureteric artery
intersection_of: UBERON:0001637 ! artery
intersection_of: part_of UBERON:0000056 ! ureter

[Term]
id: UBERON:0003469
name: respiratory system artery
xref: MA:0001804 ! respiratory system artery
intersection_of: UBERON:0001637 ! artery
intersection_of: part_of UBERON:0001004 ! respiratory system

[Term]
id: UBERON:0003470
name: artery of upper lip
xref: MA:0001917 ! artery of upper lip
intersection_of: UBERON:0001637 ! artery
intersection_of: part_of UBERON:0001834 ! upper lip

[Term]
id: UBERON:0003471
name: artery of lower lip
xref: MA:0001916 ! artery of lower lip
intersection_of: UBERON:0001637 ! artery
intersection_of: part_of UBERON:0001835 ! lower lip

[Term]
id: UBERON:0003472
name: cerebellar artery
xref: MA:0001933 ! cerebellar artery
intersection_of: UBERON:0001637 ! artery
intersection_of: part_of UBERON:0002037 ! cerebellum
xref: ncithesaurus:Cerebellar_Artery ! Cerebellar Artery

[Term]
id: UBERON:0003473
name: thoracic cavity artery
xref: MA:0001902 ! thoracic cavity artery
intersection_of: UBERON:0001637 ! artery
intersection_of: part_of UBERON:0002224 ! thoracic cavity

[Term]
id: UBERON:0003474
name: meningeal artery
xref: MA:0002001 ! meningeal artery
intersection_of: UBERON:0001637 ! artery
intersection_of: part_of UBERON:0002360 ! meninx

[Term]
id: UBERON:0003475
name: ureteric vein
xref: MA:0002250 ! ureteric vein
intersection_of: UBERON:0001638 ! vein
intersection_of: part_of UBERON:0000056 ! ureter

[Term]
id: UBERON:0003476
name: respiratory system venous blood vessel
xref: MA:0001809 ! respiratory system venous blood vessel
xref: MA:0001810 ! respiratory system vein
intersection_of: UBERON:0001638 ! vein
intersection_of: part_of UBERON:0001004 ! respiratory system

[Term]
id: UBERON:0003477
name: vein of upper lip
xref: MA:0002255 ! vein of upper lip
intersection_of: UBERON:0001638 ! vein
intersection_of: part_of UBERON:0001834 ! upper lip

[Term]
id: UBERON:0003478
name: vein of lower lip
xref: MA:0002253 ! vein of lower lip
intersection_of: UBERON:0001638 ! vein
intersection_of: part_of UBERON:0001835 ! lower lip

[Term]
id: UBERON:0003479
name: thoracic cavity vein
xref: MA:0001903 ! thoracic cavity vein
intersection_of: UBERON:0001638 ! vein
intersection_of: part_of UBERON:0002224 ! thoracic cavity

[Term]
id: UBERON:0003480
name: vein of clitoris
xref: MA:0002252 ! vein of clitoris
intersection_of: UBERON:0001638 ! vein
intersection_of: part_of UBERON:0002411 ! clitoris

[Term]
id: UBERON:0003481
name: tail vein
xref: MA:0002233 ! tail vein
intersection_of: UBERON:0001638 ! vein
intersection_of: part_of UBERON:0002415 ! tail

[Term]
id: UBERON:0003482
name: vein of trabecular bone
xref: MA:0002254 ! vein of trabecular bone
intersection_of: UBERON:0001638 ! vein
intersection_of: part_of UBERON:0002483 ! trabecular bone

[Term]
id: UBERON:0003483
name: thymus lymphoid tissue
xref: MA:0002673 ! thymus lymphoid tissue
intersection_of: UBERON:0001744 ! lymphoid tissue
intersection_of: part_of UBERON:0002370 ! thymus

[Term]
id: UBERON:0003484
name: eye sebaceous gland
xref: MA:0002452 ! eye sebaceous gland
intersection_of: UBERON:0001821 ! sebaceous gland
intersection_of: part_of UBERON:0000019 ! camera-type eye

[Term]
id: UBERON:0003485
name: vagina sebaceous gland
xref: MA:0001732 ! vagina sebaceous gland
intersection_of: UBERON:0001821 ! sebaceous gland
intersection_of: part_of UBERON:0000996 ! vagina

[Term]
id: UBERON:0003486
name: mammary gland sebaceous gland
xref: MA:0000794 ! mammary gland sebaceous gland
intersection_of: UBERON:0001821 ! sebaceous gland
intersection_of: part_of UBERON:0001911 ! lactiferous gland

[Term]
id: UBERON:0003487
name: skin sebaceous gland
xref: MA:0000149 ! skin sebaceous gland
intersection_of: UBERON:0001821 ! sebaceous gland
intersection_of: part_of UBERON:0002097 ! skin

[Term]
id: UBERON:0003488
name: abdominal mammary gland
xref: MA:0000787 ! abdominal mammary gland
intersection_of: UBERON:0001911 ! lactiferous gland
intersection_of: part_of UBERON:0000916 ! abdomen

[Term]
id: UBERON:0003489
name: respiratory system capillary endothelium
xref: MA:0001808 ! respiratory system capillary endothelium
intersection_of: UBERON:0001915 ! endothelium of capillary
intersection_of: part_of UBERON:0001004 ! respiratory system

[Term]
id: UBERON:0003490
name: respiratory system reticular lamina
xref: MA:0001817 ! respiratory system reticular lamina
intersection_of: UBERON:0001967 ! reticular lamina
intersection_of: part_of UBERON:0001004 ! respiratory system

[Term]
id: UBERON:0003491
name: trachea reticular lamina
xref: MA:0001856 ! trachea reticular lamina
intersection_of: UBERON:0001967 ! reticular lamina
intersection_of: part_of UBERON:0001005 ! trachea

[Term]
id: UBERON:0003492
name: bronchus reticular lamina
xref: MA:0001834 ! bronchus reticular lamina
intersection_of: UBERON:0001967 ! reticular lamina
intersection_of: part_of UBERON:0002185 ! bronchus

[Term]
id: UBERON:0003493
name: trachea reticular lamina
xref: MA:0001856 ! trachea reticular lamina
intersection_of: UBERON:0001967 ! reticular lamina
intersection_of: part_of UBERON:0003126 ! vertebrate trachea

[Term]
id: UBERON:0003494
name: respiratory system venule
xref: MA:0001813 ! respiratory system venule
intersection_of: UBERON:0001979 ! venule
intersection_of: part_of UBERON:0001004 ! respiratory system

[Term]
id: UBERON:0003495
name: respiratory system arteriole
xref: MA:0001803 ! respiratory system arteriole
intersection_of: UBERON:0001980 ! arteriole
intersection_of: part_of UBERON:0001004 ! respiratory system

[Term]
id: UBERON:0003496
name: head blood vessel
xref: MA:0000575 ! head blood vessel
intersection_of: UBERON:0001981 ! blood vessel
intersection_of: part_of UBERON:0000033 ! head

[Term]
id: UBERON:0003497
name: abdomen blood vessel
xref: MA:0000518 ! abdomen blood vessel
intersection_of: UBERON:0001981 ! blood vessel
intersection_of: part_of UBERON:0000916 ! abdomen

[Term]
id: UBERON:0003498
name: heart blood vessel
xref: MA:0002483 ! heart blood vessel
intersection_of: UBERON:0001981 ! blood vessel
intersection_of: part_of UBERON:0000948 ! heart

[Term]
id: UBERON:0003499
name: brain blood vessel
xref: MA:0002769 ! brain blood vessel
intersection_of: UBERON:0001981 ! blood vessel
intersection_of: part_of UBERON:0000955 ! brain

[Term]
id: UBERON:0003500
name: corneal blood vessel
xref: MA:0001241 ! corneal blood vessel
intersection_of: UBERON:0001981 ! blood vessel
intersection_of: part_of UBERON:0000964 ! cornea

[Term]
id: UBERON:0003501
name: retina blood vessel
xref: MA:0001317 ! retina blood vessel
intersection_of: UBERON:0001981 ! blood vessel
intersection_of: part_of UBERON:0000966 ! retina

[Term]
id: UBERON:0003502
name: neck blood vessel
xref: MA:0000583 ! neck blood vessel
intersection_of: UBERON:0001981 ! blood vessel
intersection_of: part_of UBERON:0000974 ! neck

[Term]
id: UBERON:0003503
name: leg blood vessel
xref: MA:0000669 ! leg blood vessel
intersection_of: UBERON:0001981 ! blood vessel
intersection_of: part_of UBERON:0000978 ! leg

[Term]
id: UBERON:0003504
name: respiratory system blood vessel
xref: MA:0001799 ! respiratory system blood vessel
intersection_of: UBERON:0001981 ! blood vessel
intersection_of: part_of UBERON:0001004 ! respiratory system

[Term]
id: UBERON:0003505
name: trachea blood vessel
xref: MA:0001852 ! trachea blood vessel
intersection_of: UBERON:0001981 ! blood vessel
intersection_of: part_of UBERON:0001005 ! trachea

[Term]
id: UBERON:0003506
name: chest blood vessel
xref: MA:0000549 ! chest blood vessel
intersection_of: UBERON:0001981 ! blood vessel
intersection_of: part_of UBERON:0001443 ! chest

[Term]
id: UBERON:0003507
name: arm blood vessel
xref: MA:0000591 ! arm blood vessel
intersection_of: UBERON:0001981 ! blood vessel
intersection_of: part_of UBERON:0001460 ! arm

[Term]
id: UBERON:0003508
name: foot digit blood vessel
xref: MA:0000645 ! foot digit blood vessel
intersection_of: UBERON:0001981 ! blood vessel
intersection_of: part_of UBERON:0001466 ! toe

[Term]
id: UBERON:0003509
name: arterial blood vessel
xref: MA:0000061 ! arterial blood vessel
intersection_of: UBERON:0001981 ! blood vessel
intersection_of: part_of UBERON:0001637 ! artery

[Term]
id: UBERON:0003510
name: eyelid blood vessel
xref: MA:0001250 ! eyelid blood vessel
intersection_of: UBERON:0001981 ! blood vessel
intersection_of: part_of UBERON:0001711 ! eyelid

[Term]
id: UBERON:0003511
name: iris blood vessel
xref: MA:0001290 ! iris blood vessel
intersection_of: UBERON:0001981 ! blood vessel
intersection_of: part_of UBERON:0001769 ! iris

[Term]
id: UBERON:0003512
name: lung blood vessel
xref: MA:0002457 ! lung blood vessel
intersection_of: UBERON:0001981 ! blood vessel
intersection_of: part_of UBERON:0002048 ! lung

[Term]
id: UBERON:0003513
name: trunk blood vessel
xref: MA:0000511 ! trunk blood vessel
intersection_of: UBERON:0001981 ! blood vessel
intersection_of: part_of UBERON:0002100 ! trunk

[Term]
id: UBERON:0003514
name: limb blood vessel
xref: MA:0000687 ! limb blood vessel
intersection_of: UBERON:0001981 ! blood vessel
intersection_of: part_of UBERON:0002101 ! limb

[Term]
id: UBERON:0003515
name: forelimb blood vessel
xref: MA:0000611 ! forelimb blood vessel
intersection_of: UBERON:0001981 ! blood vessel
intersection_of: part_of UBERON:0002102 ! forelimb

[Term]
id: UBERON:0003516
name: hindlimb blood vessel
xref: MA:0000659 ! hindlimb blood vessel
intersection_of: UBERON:0001981 ! blood vessel
intersection_of: part_of UBERON:0002103 ! hindlimb

[Term]
id: UBERON:0003517
name: kidney blood vessel
xref: MA:0001682 ! kidney blood vessel
intersection_of: UBERON:0001981 ! blood vessel
intersection_of: part_of UBERON:0002113 ! kidney

[Term]
id: UBERON:0003518
name: main bronchus blood vessel
xref: MA:0001844 ! main bronchus blood vessel
intersection_of: UBERON:0001981 ! blood vessel
intersection_of: part_of UBERON:0002182 ! main bronchus

[Term]
id: UBERON:0003519
name: thoracic cavity blood vessel
xref: MA:0000554 ! thoracic cavity blood vessel
intersection_of: UBERON:0001981 ! blood vessel
intersection_of: part_of UBERON:0002224 ! thoracic cavity

[Term]
id: UBERON:0003520
name: pelvis blood vessel
xref: MA:0000531 ! pelvis blood vessel
intersection_of: UBERON:0001981 ! blood vessel
intersection_of: part_of UBERON:0002355 ! pelvis

[Term]
id: UBERON:0003521
name: foot blood vessel
xref: MA:0000642 ! foot blood vessel
intersection_of: UBERON:0001981 ! blood vessel
intersection_of: part_of UBERON:0002387 ! foot

[Term]
id: UBERON:0003522
name: hand digit blood vessel
xref: MA:0000621 ! hand digit blood vessel
intersection_of: UBERON:0001981 ! blood vessel
intersection_of: part_of UBERON:0002389 ! finger

[Term]
id: UBERON:0003523
name: hand blood vessel
xref: MA:0000618 ! hand blood vessel
intersection_of: UBERON:0001981 ! blood vessel
intersection_of: part_of UBERON:0002398 ! hand

[Term]
id: UBERON:0003524
name: tail blood vessel
xref: MA:0000695 ! tail blood vessel
intersection_of: UBERON:0001981 ! blood vessel
intersection_of: part_of UBERON:0002415 ! tail

[Term]
id: UBERON:0003525
name: trachea blood vessel
xref: MA:0001852 ! trachea blood vessel
intersection_of: UBERON:0001981 ! blood vessel
intersection_of: part_of UBERON:0003126 ! vertebrate trachea

[Term]
id: UBERON:0003526
name: respiratory system capillary
xref: MA:0001807 ! respiratory system capillary
intersection_of: UBERON:0001982 ! capillary
intersection_of: part_of UBERON:0001004 ! respiratory system

[Term]
id: UBERON:0003527
name: kidney capillary
xref: MA:0002586 ! kidney capillary
intersection_of: UBERON:0001982 ! capillary
intersection_of: part_of UBERON:0002113 ! kidney

[Term]
id: UBERON:0003528
name: brain grey matter
xref: MA:0000810 ! brain grey matter
intersection_of: UBERON:0002020 ! gray matter of neuraxis
intersection_of: part_of UBERON:0000955 ! brain

[Term]
id: UBERON:0003529
name: respiratory system lymphatic vessel endothelium
xref: MA:0001825 ! respiratory system lymphatic vessel endothelium
intersection_of: UBERON:0002042 ! endothelium of lymphatic vessel
intersection_of: part_of UBERON:0001004 ! respiratory system

[Term]
id: UBERON:0003530
name: foot digit skin
xref: MA:0000650 ! foot digit skin
intersection_of: UBERON:0002097 ! skin
intersection_of: part_of UBERON:0001466 ! toe
xref: FMA:37852 ! Skin of toe
xref: ncithesaurus:Foot_Digit_Skin ! Foot Digit Skin

[Term]
id: UBERON:0003531
name: forelimb skin
xref: MA:0000617 ! forelimb skin
intersection_of: UBERON:0002097 ! skin
intersection_of: part_of UBERON:0002102 ! forelimb
xref: FMA:23101 ! Skin of upper limb

[Term]
id: UBERON:0003532
name: hindlimb skin
xref: MA:0000665 ! hindlimb skin
intersection_of: UBERON:0002097 ! skin
intersection_of: part_of UBERON:0002103 ! hindlimb
xref: FMA:23102 ! Skin of lower limb

[Term]
id: UBERON:0003533
name: hand digit skin
xref: MA:0000626 ! hand digit skin
intersection_of: UBERON:0002097 ! skin
intersection_of: part_of UBERON:0002389 ! finger
xref: FMA:38304 ! Skin of finger
xref: ncithesaurus:Hand_Digit_Skin ! Hand Digit Skin

[Term]
id: UBERON:0003534
name: tail skin
xref: MA:0000700 ! tail skin
intersection_of: UBERON:0002097 ! skin
intersection_of: part_of UBERON:0002415 ! tail

[Term]
id: UBERON:0003535
name: vagus X nerve trunk
xref: MA:0001150 ! vagus X nerve trunk
intersection_of: UBERON:0002100 ! trunk
intersection_of: part_of UBERON:0001759 ! vagus nerve
xref: FMA:6221 ! Trunk of vagus nerve

[Term]
id: UBERON:0003536
name: right lung alveolar duct
xref: MA:0001785 ! right lung alveolar duct
intersection_of: UBERON:0002173 ! alveolar duct
intersection_of: part_of UBERON:0002167 ! right lung
xref: ncithesaurus:Right_Lung_Alveolar_Duct ! Right Lung Alveolar Duct

[Term]
id: UBERON:0003537
name: left lung alveolar duct
xref: MA:0001776 ! left lung alveolar duct
intersection_of: UBERON:0002173 ! alveolar duct
intersection_of: part_of UBERON:0002168 ! left lung
xref: ncithesaurus:Left_Lung_Alveolar_Duct ! Left Lung Alveolar Duct

[Term]
id: UBERON:0003538
name: right lung bronchiole
xref: MA:0001787 ! right lung bronchiole
intersection_of: UBERON:0002186 ! bronchiole
intersection_of: part_of UBERON:0002167 ! right lung
xref: ncithesaurus:Right_Lung_Bronchiole ! Right Lung Bronchiole

[Term]
id: UBERON:0003539
name: left lung bronchiole
xref: MA:0001778 ! left lung bronchiole
intersection_of: UBERON:0002186 ! bronchiole
intersection_of: part_of UBERON:0002168 ! left lung
xref: ncithesaurus:Left_Lung_Bronchiole ! Left Lung Bronchiole

[Term]
id: UBERON:0003540
name: right lung terminal bronchiole
xref: MA:0001789 ! right lung terminal bronchiole
intersection_of: UBERON:0002187 ! terminal bronchiole
intersection_of: part_of UBERON:0002167 ! right lung
xref: ncithesaurus:Right_Lung_Terminal_Bronchiole ! Right Lung Terminal Bronchiole

[Term]
id: UBERON:0003541
name: left lung terminal bronchiole
xref: MA:0001780 ! left lung terminal bronchiole
intersection_of: UBERON:0002187 ! terminal bronchiole
intersection_of: part_of UBERON:0002168 ! left lung
xref: ncithesaurus:Left_Lung_Terminal_Bronchiole ! Left Lung Terminal Bronchiole

[Term]
id: UBERON:0003542
name: right lung respiratory bronchiole
xref: MA:0001788 ! right lung respiratory bronchiole
intersection_of: UBERON:0002188 ! respiratory bronchiole
intersection_of: part_of UBERON:0002167 ! right lung
xref: ncithesaurus:Right_Lung_Respiratory_Bronchiole ! Right Lung Respiratory Bronchiole

[Term]
id: UBERON:0003543
name: left lung respiratory bronchiole
xref: MA:0001779 ! left lung respiratory bronchiole
intersection_of: UBERON:0002188 ! respiratory bronchiole
intersection_of: part_of UBERON:0002168 ! left lung
xref: ncithesaurus:Left_Lung_Respiratory_Bronchiole ! Left Lung Respiratory Bronchiole

[Term]
id: UBERON:0003544
name: brain white matter
xref: MA:0000820 ! brain white matter
intersection_of: UBERON:0002316 ! white matter of neuraxis
intersection_of: part_of UBERON:0000955 ! brain
xref: ncithesaurus:Brain_White_Matter ! Brain White Matter

[Term]
id: UBERON:0003545
name: brainstem white matter
xref: MA:0002741 ! brainstem white matter
intersection_of: UBERON:0002316 ! white matter of neuraxis
intersection_of: part_of UBERON:0002298 ! brainstem

[Term]
id: UBERON:0003546
name: distal convoluted tubule macula densa
xref: MA:0001668 ! distal convoluted tubule macula densa
intersection_of: UBERON:0002335 ! macula densa
intersection_of: part_of UBERON:0001292 ! distal convoluted tubule

[Term]
id: UBERON:0003547
name: brain meninges
xref: MA:0000813 ! brain meninges
intersection_of: UBERON:0002360 ! meninx
intersection_of: part_of UBERON:0000955 ! brain
xref: HOG:0000013 ! brain meninges

[Term]
id: UBERON:0003548
name: forebrain meninges
xref: MA:0000883 ! forebrain meninges
intersection_of: UBERON:0002360 ! meninx
intersection_of: part_of UBERON:0001890 ! forebrain

[Term]
id: UBERON:0003549
name: brain pia mater
xref: MA:0000816 ! brain pia mater
intersection_of: UBERON:0002361 ! pia mater
intersection_of: part_of UBERON:0000955 ! brain
xref: ncithesaurus:Brain_Pia_Mater ! Brain Pia Mater

[Term]
id: UBERON:0003550
name: forebrain pia mater
xref: MA:0000886 ! forebrain pia mater
intersection_of: UBERON:0002361 ! pia mater
intersection_of: part_of UBERON:0001890 ! forebrain

[Term]
id: UBERON:0003551
name: midbrain pia mater
xref: MA:0001061 ! midbrain pia mater
intersection_of: UBERON:0002361 ! pia mater
intersection_of: part_of UBERON:0001891 ! midbrain

[Term]
id: UBERON:0003552
name: telencephalon pia mater
xref: MA:0000982 ! telencephalon pia mater
intersection_of: UBERON:0002361 ! pia mater
intersection_of: part_of UBERON:0001893 ! telencephalon

[Term]
id: UBERON:0003553
name: diencephalon pia mater
xref: MA:0000829 ! diencephalon pia mater
intersection_of: UBERON:0002361 ! pia mater
intersection_of: part_of UBERON:0001894 ! diencephalon

[Term]
id: UBERON:0003554
name: hindbrain pia mater
xref: MA:0000990 ! hindbrain pia mater
intersection_of: UBERON:0002361 ! pia mater
intersection_of: part_of UBERON:0002028 ! hindbrain

[Term]
id: UBERON:0003555
name: spinal cord pia mater
xref: MA:0001133 ! spinal cord pia mater
intersection_of: UBERON:0002361 ! pia mater
intersection_of: part_of UBERON:0002240 ! spinal cord
xref: ncithesaurus:Spinal_Cord_Pia_Mater ! Spinal Cord Pia Mater

[Term]
id: UBERON:0003556
name: forebrain arachnoid mater
xref: MA:0000884 ! forebrain arachnoid mater
intersection_of: UBERON:0002362 ! arachnoid mater
intersection_of: part_of UBERON:0001890 ! forebrain

[Term]
id: UBERON:0003557
name: midbrain arachnoid mater
xref: MA:0001059 ! midbrain arachnoid mater
intersection_of: UBERON:0002362 ! arachnoid mater
intersection_of: part_of UBERON:0001891 ! midbrain

[Term]
id: UBERON:0003558
name: diencephalon arachnoid mater
xref: MA:0000827 ! diencephalon arachnoid mater
intersection_of: UBERON:0002362 ! arachnoid mater
intersection_of: part_of UBERON:0001894 ! diencephalon

[Term]
id: UBERON:0003559
name: hindbrain arachnoid mater
xref: MA:0000988 ! hindbrain arachnoid mater
intersection_of: UBERON:0002362 ! arachnoid mater
intersection_of: part_of UBERON:0002028 ! hindbrain

[Term]
id: UBERON:0003560
name: spinal cord arachnoid mater
xref: MA:0001131 ! spinal cord arachnoid mater
intersection_of: UBERON:0002362 ! arachnoid mater
intersection_of: part_of UBERON:0002240 ! spinal cord

[Term]
id: UBERON:0003561
name: forebrain dura mater
xref: MA:0000885 ! forebrain dura mater
intersection_of: UBERON:0002363 ! dura mater
intersection_of: part_of UBERON:0001890 ! forebrain

[Term]
id: UBERON:0003562
name: midbrain dura mater
xref: MA:0001060 ! midbrain dura mater
intersection_of: UBERON:0002363 ! dura mater
intersection_of: part_of UBERON:0001891 ! midbrain

[Term]
id: UBERON:0003563
name: telencephalon dura mater
xref: MA:0000981 ! telencephalon dura mater
intersection_of: UBERON:0002363 ! dura mater
intersection_of: part_of UBERON:0001893 ! telencephalon

[Term]
id: UBERON:0003564
name: diencephalon dura mater
xref: MA:0000828 ! diencephalon dura mater
intersection_of: UBERON:0002363 ! dura mater
intersection_of: part_of UBERON:0001894 ! diencephalon

[Term]
id: UBERON:0003565
name: hindbrain dura mater
xref: MA:0000989 ! hindbrain dura mater
intersection_of: UBERON:0002363 ! dura mater
intersection_of: part_of UBERON:0002028 ! hindbrain

[Term]
id: UBERON:0003566
name: head connective tissue
xref: MA:0000577 ! head connective tissue
intersection_of: UBERON:0002384 ! connective tissue
intersection_of: part_of UBERON:0000033 ! head

[Term]
id: UBERON:0003567
name: abdomen connective tissue
xref: MA:0000519 ! abdomen connective tissue
intersection_of: UBERON:0002384 ! connective tissue
intersection_of: part_of UBERON:0000916 ! abdomen

[Term]
id: UBERON:0003568
name: neck connective tissue
xref: MA:0000585 ! neck connective tissue
intersection_of: UBERON:0002384 ! connective tissue
intersection_of: part_of UBERON:0000974 ! neck

[Term]
id: UBERON:0003569
name: leg connective tissue
xref: MA:0000671 ! leg connective tissue
intersection_of: UBERON:0002384 ! connective tissue
intersection_of: part_of UBERON:0000978 ! leg

[Term]
id: UBERON:0003570
name: respiratory system connective tissue
xref: MA:0001814 ! respiratory system connective tissue
intersection_of: UBERON:0002384 ! connective tissue
intersection_of: part_of UBERON:0001004 ! respiratory system

[Term]
id: UBERON:0003571
name: trachea connective tissue
xref: MA:0001853 ! trachea connective tissue
intersection_of: UBERON:0002384 ! connective tissue
intersection_of: part_of UBERON:0001005 ! trachea

[Term]
id: UBERON:0003572
name: chest connective tissue
xref: MA:0000550 ! chest connective tissue
intersection_of: UBERON:0002384 ! connective tissue
intersection_of: part_of UBERON:0001443 ! chest

[Term]
id: UBERON:0003573
name: arm connective tissue
xref: MA:0000593 ! arm connective tissue
intersection_of: UBERON:0002384 ! connective tissue
intersection_of: part_of UBERON:0001460 ! arm

[Term]
id: UBERON:0003574
name: elbow connective tissue
xref: MA:0000609 ! elbow connective tissue
intersection_of: UBERON:0002384 ! connective tissue
intersection_of: part_of UBERON:0001461 ! elbow

[Term]
id: UBERON:0003575
name: wrist connective tissue
xref: MA:0000636 ! wrist connective tissue
intersection_of: UBERON:0002384 ! connective tissue
intersection_of: part_of UBERON:0001462 ! wrist

[Term]
id: UBERON:0003576
name: hip connective tissue
xref: MA:0000656 ! hip connective tissue
intersection_of: UBERON:0002384 ! connective tissue
intersection_of: part_of UBERON:0001464 ! hip

[Term]
id: UBERON:0003577
name: knee connective tissue
xref: MA:0000667 ! knee connective tissue
intersection_of: UBERON:0002384 ! connective tissue
intersection_of: part_of UBERON:0001465 ! knee

[Term]
id: UBERON:0003578
name: foot digit connective tissue
xref: MA:0000647 ! foot digit connective tissue
intersection_of: UBERON:0002384 ! connective tissue
intersection_of: part_of UBERON:0001466 ! toe

[Term]
id: UBERON:0003579
name: shoulder connective tissue
xref: MA:0000632 ! shoulder connective tissue
intersection_of: UBERON:0002384 ! connective tissue
intersection_of: part_of UBERON:0001467 ! shoulder

[Term]
id: UBERON:0003580
name: lower respiratory tract connective tissue
xref: MA:0002409 ! lower respiratory tract connective tissue
intersection_of: UBERON:0002384 ! connective tissue
intersection_of: part_of UBERON:0001558 ! lower respiratory tract

[Term]
id: UBERON:0003581
name: eyelid connective tissue
xref: MA:0001251 ! eyelid connective tissue
intersection_of: UBERON:0002384 ! connective tissue
intersection_of: part_of UBERON:0001711 ! eyelid
xref: ncithesaurus:Eyelid_Connective_Tissue ! Eyelid Connective Tissue

[Term]
id: UBERON:0003582
name: nasopharynx connective tissue
xref: MA:0001864 ! nasopharynx connective tissue
intersection_of: UBERON:0002384 ! connective tissue
intersection_of: part_of UBERON:0001728 ! nasopharynx

[Term]
id: UBERON:0003583
name: larynx connective tissue
xref: MA:0001754 ! larynx connective tissue
intersection_of: UBERON:0002384 ! connective tissue
intersection_of: part_of UBERON:0001737 ! larynx

[Term]
id: UBERON:0003584
name: mammary gland connective tissue
xref: MA:0002897 ! mammary gland connective tissue
intersection_of: UBERON:0002384 ! connective tissue
intersection_of: part_of UBERON:0001911 ! lactiferous gland
xref: FMA:74479 ! Connective tissue of lactiferous gland

[Term]
id: UBERON:0003585
name: dermis connective tissue
xref: MA:0000799 ! dermis connective tissue
intersection_of: UBERON:0002384 ! connective tissue
intersection_of: part_of UBERON:0002067 ! dermis

[Term]
id: UBERON:0003586
name: trunk connective tissue
xref: MA:0000513 ! trunk connective tissue
intersection_of: UBERON:0002384 ! connective tissue
intersection_of: part_of UBERON:0002100 ! trunk

[Term]
id: UBERON:0003587
name: limb connective tissue
xref: MA:0000689 ! limb connective tissue
intersection_of: UBERON:0002384 ! connective tissue
intersection_of: part_of UBERON:0002101 ! limb

[Term]
id: UBERON:0003588
name: forelimb connective tissue
xref: MA:0000613 ! forelimb connective tissue
intersection_of: UBERON:0002384 ! connective tissue
intersection_of: part_of UBERON:0002102 ! forelimb

[Term]
id: UBERON:0003589
name: hindlimb connective tissue
xref: MA:0000661 ! hindlimb connective tissue
intersection_of: UBERON:0002384 ! connective tissue
intersection_of: part_of UBERON:0002103 ! hindlimb

[Term]
id: UBERON:0003590
name: main bronchus connective tissue
xref: MA:0001845 ! main bronchus connective tissue
intersection_of: UBERON:0002384 ! connective tissue
intersection_of: part_of UBERON:0002182 ! main bronchus

[Term]
id: UBERON:0003591
name: lobar bronchus connective tissue
xref: MA:0001841 ! lobar bronchus connective tissue
intersection_of: UBERON:0002384 ! connective tissue
intersection_of: part_of UBERON:0002183 ! lobar bronchus

[Term]
id: UBERON:0003592
name: bronchus connective tissue
xref: MA:0001831 ! bronchus connective tissue
intersection_of: UBERON:0002384 ! connective tissue
intersection_of: part_of UBERON:0002185 ! bronchus
xref: ncithesaurus:Bronchus_Connective_Tissue ! Bronchus Connective Tissue

[Term]
id: UBERON:0003593
name: thoracic cavity connective tissue
xref: MA:0000555 ! thoracic cavity connective tissue
intersection_of: UBERON:0002384 ! connective tissue
intersection_of: part_of UBERON:0002224 ! thoracic cavity

[Term]
id: UBERON:0003594
name: pelvis connective tissue
xref: MA:0000533 ! pelvis connective tissue
intersection_of: UBERON:0002384 ! connective tissue
intersection_of: part_of UBERON:0002355 ! pelvis

[Term]
id: UBERON:0003595
name: foot connective tissue
xref: MA:0000644 ! foot connective tissue
intersection_of: UBERON:0002384 ! connective tissue
intersection_of: part_of UBERON:0002387 ! foot

[Term]
id: UBERON:0003596
name: ankle connective tissue
xref: MA:0000639 ! ankle connective tissue
intersection_of: UBERON:0002384 ! connective tissue
intersection_of: part_of UBERON:0002388 ! ankle

[Term]
id: UBERON:0003597
name: hand digit connective tissue
xref: MA:0000623 ! hand digit connective tissue
intersection_of: UBERON:0002384 ! connective tissue
intersection_of: part_of UBERON:0002389 ! finger

[Term]
id: UBERON:0003598
name: hand connective tissue
xref: MA:0000620 ! hand connective tissue
intersection_of: UBERON:0002384 ! connective tissue
intersection_of: part_of UBERON:0002398 ! hand

[Term]
id: UBERON:0003599
name: tail connective tissue
xref: MA:0000697 ! tail connective tissue
intersection_of: UBERON:0002384 ! connective tissue
intersection_of: part_of UBERON:0002415 ! tail

[Term]
id: UBERON:0003600
name: trachea connective tissue
xref: MA:0001853 ! trachea connective tissue
intersection_of: UBERON:0002384 ! connective tissue
intersection_of: part_of UBERON:0003126 ! vertebrate trachea

[Term]
id: UBERON:0003601
name: neck cartilage
xref: MA:0000586 ! neck cartilage
intersection_of: UBERON:0002418 ! cartilage
intersection_of: part_of UBERON:0000974 ! neck

[Term]
id: UBERON:0003602
name: trachea cartilage
xref: MA:0001857 ! trachea cartilage
intersection_of: UBERON:0002418 ! cartilage
intersection_of: part_of UBERON:0001005 ! trachea
xref: ncithesaurus:Trachea_Cartilage ! Trachea Cartilage

[Term]
id: UBERON:0003603
name: lower respiratory tract cartilage
xref: MA:0001819 ! lower respiratory tract cartilage
intersection_of: UBERON:0002418 ! cartilage
intersection_of: part_of UBERON:0001558 ! lower respiratory tract
xref: ncithesaurus:Lower_Respiratory_Tract_Cartilage ! Lower Respiratory Tract Cartilage

[Term]
id: UBERON:0003604
name: trachea cartilage
xref: MA:0001857 ! trachea cartilage
intersection_of: UBERON:0002418 ! cartilage
intersection_of: part_of UBERON:0003126 ! vertebrate trachea
xref: ncithesaurus:Trachea_Cartilage ! Trachea Cartilage

[Term]
id: UBERON:0003605
name: eye skin gland
xref: MA:0002451 ! eye skin gland
intersection_of: UBERON:0002419 ! skin gland
intersection_of: part_of UBERON:0000019 ! camera-type eye

[Term]
id: UBERON:0003606
name: limb long bone
xref: MA:0000298 ! limb long bone
intersection_of: UBERON:0002495 ! long bone
intersection_of: part_of UBERON:0002101 ! limb

[Term]
id: UBERON:0003607
name: forelimb long bone
xref: MA:0000299 ! forelimb long bone
intersection_of: UBERON:0002495 ! long bone
intersection_of: part_of UBERON:0002102 ! forelimb

[Term]
id: UBERON:0003608
name: hindlimb long bone
xref: MA:0000300 ! hindlimb long bone
intersection_of: UBERON:0002495 ! long bone
intersection_of: part_of UBERON:0002103 ! hindlimb

[Term]
id: UBERON:0003609
name: aorta elastic tissue
xref: MA:0002859 ! aorta elastic tissue
intersection_of: UBERON:0002521 ! elastic tissue
intersection_of: part_of UBERON:0000947 ! aorta

[Term]
id: UBERON:0003610
name: heart elastic tissue
xref: MA:0002858 ! heart elastic tissue
intersection_of: UBERON:0002521 ! elastic tissue
intersection_of: part_of UBERON:0000948 ! heart

[Term]
id: UBERON:0003611
name: respiratory system elastic tissue
xref: MA:0001820 ! respiratory system elastic tissue
intersection_of: UBERON:0002521 ! elastic tissue
intersection_of: part_of UBERON:0001004 ! respiratory system

[Term]
id: UBERON:0003612
name: trachea elastic tissue
xref: MA:0001861 ! trachea elastic tissue
intersection_of: UBERON:0002521 ! elastic tissue
intersection_of: part_of UBERON:0001005 ! trachea

[Term]
id: UBERON:0003613
name: cardiovascular system elastic tissue
xref: MA:0002857 ! cardiovascular system elastic tissue
intersection_of: UBERON:0002521 ! elastic tissue
intersection_of: part_of UBERON:0001009 ! circulatory system

[Term]
id: UBERON:0003614
name: blood vessel elastic tissue
xref: MA:0002856 ! blood vessel elastic tissue
intersection_of: UBERON:0002521 ! elastic tissue
intersection_of: part_of UBERON:0001981 ! blood vessel

[Term]
id: UBERON:0003615
name: lung elastic tissue
xref: MA:0002860 ! lung elastic tissue
intersection_of: UBERON:0002521 ! elastic tissue
intersection_of: part_of UBERON:0002048 ! lung

[Term]
id: UBERON:0003616
name: bronchus elastic tissue
xref: MA:0001838 ! bronchus elastic tissue
intersection_of: UBERON:0002521 ! elastic tissue
intersection_of: part_of UBERON:0002185 ! bronchus
xref: ncithesaurus:Bronchus_Elastic_Tissue ! Bronchus Elastic Tissue

[Term]
id: UBERON:0003617
name: trachea elastic tissue
xref: MA:0001861 ! trachea elastic tissue
intersection_of: UBERON:0002521 ! elastic tissue
intersection_of: part_of UBERON:0003126 ! vertebrate trachea

[Term]
id: UBERON:0003618
name: aorta tunica media
xref: MA:0002903 ! aorta tunica media
intersection_of: UBERON:0002522 ! tunica media
intersection_of: part_of UBERON:0000947 ! aorta
xref: FMA:74433 ! Tunica media of aorta

[Term]
id: UBERON:0003619
name: aorta tunica intima
xref: MA:0002904 ! aorta tunica intima
intersection_of: UBERON:0002523 ! tunica intima
intersection_of: part_of UBERON:0000947 ! aorta
xref: FMA:74419 ! Tunica intima of aorta


[Term]
id: UBERON:0003622
name: hand digit 2
def: "2nd digit of the hand in mouse and human and homologs." [Wikipedia:Index_finger]
comment: comment: This class represents all instances of the 2nd digit of the hand in human and mouse, and all homologues of this digit in other vertebrates. See http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2553264/
synonym: "2nd digit of hand" EXACT []
synonym: "2nd finger" EXACT []
synonym: "index finger" NARROW []
synonym: "second finger" EXACT []
xref: FMA:24946 ! Index finger
xref: MA:0000455 ! hand digit 2
is_a: UBERON:0002389 ! finger
xref: ncithesaurus:Hand_Digit_2 ! Hand Digit 2

[Term]
id: UBERON:0003623
name: hand digit 3
def: "3rd digit of the hand in mouse and human and homologs." [Wikipedia:Middle_finger]
comment: comment: This class represents all instances of the 3rd digit of the hand in human and mouse, and all homologues of this digit in other vertebrates. See http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2553264/
synonym: "3rd digit of hand" EXACT []
synonym: "3rd finger" EXACT []
synonym: "middle finger" NARROW []
synonym: "third finger" EXACT []
xref: FMA:24947 ! Middle finger
xref: MA:0000456 ! hand digit 3
is_a: UBERON:0002389 ! finger
xref: ncithesaurus:Hand_Digit_3 ! Hand Digit 3

[Term]
id: UBERON:0003624
name: hand digit 4
def: "4th digit of the hand in mouse and human and homologs." [Wikipedia:Ring_finger]
comment: comment: This class represents all instances of the 4th digit of the hand in human and mouse, and all homologues of this digit in other vertebrates. See http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2553264/
synonym: "4th digit of hand" EXACT []
synonym: "4th finger" EXACT []
synonym: "fourth finger" EXACT []
synonym: "ring finger" NARROW []
xref: FMA:24948 ! Ring finger
xref: MA:0000457 ! hand digit 4
is_a: UBERON:0002389 ! finger
xref: ncithesaurus:Hand_Digit_4 ! Hand Digit 4

[Term]
id: UBERON:0003625
name: hand digit 5
def: "5th digit of the hand in mouse and human and homologs." [Wikipedia:Little_finger]
comment: comment: This class represents all instances of the 5th digit of the hand in human and mouse, and all homologues of this digit in other vertebrates. See http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2553264/
synonym: "5th digit of hand" EXACT []
synonym: "5th finger" EXACT []
synonym: "fifth finger" EXACT []
synonym: "little finger" NARROW []
xref: FMA:24949 ! Little finger
xref: MA:0000458 ! hand digit 5
is_a: UBERON:0002389 ! finger
xref: ncithesaurus:Hand_Digit_5 ! Hand Digit 5

[Term]
id: UBERON:0003631
name: foot digit 1
def: "1st digit of the foot in mouse and human and homologs." [Wikipedia:Big_toe]
synonym: "big toe" NARROW []
xref: FMA:25047 ! Big toe
xref: MA:0000465 ! foot digit 1
is_a: UBERON:0001466 ! toe
xref: ncithesaurus:Foot_Digit_1 ! Foot Digit 1

[Term]
id: UBERON:0003632
name: foot digit 2
def: "2nd digit of the foot in mouse and human and homologs." [UBERON:cjm]
synonym: "2nd toe" NARROW []
xref: FMA:25048 ! Second toe
xref: MA:0000466 ! foot digit 2
is_a: UBERON:0001466 ! toe
xref: ncithesaurus:Foot_Digit_2 ! Foot Digit 2

[Term]
id: UBERON:0003633
name: foot digit 3
def: "3rd digit of the foot in mouse and human and homologs." [UBERON:cjm]
synonym: "3rd toe" NARROW []
xref: FMA:25051 ! Third toe
xref: MA:0000467 ! foot digit 3
is_a: UBERON:0001466 ! toe
xref: ncithesaurus:Foot_Digit_3 ! Foot Digit 3

[Term]
id: UBERON:0003634
name: foot digit 4
def: "4th digit of the foot in mouse and human and homologs." [UBERON:cjm]
synonym: "4th toe" NARROW []
xref: FMA:25052 ! Fourth toe
xref: MA:0000468 ! foot digit 4
is_a: UBERON:0001466 ! toe
xref: ncithesaurus:Foot_Digit_4 ! Foot Digit 4

[Term]
id: UBERON:0003635
name: foot digit 5
def: "5th digit of the foot in mouse and human and homologs." [UBERON:cjm]
synonym: "5th toe" NARROW []
synonym: "little toe" NARROW []
xref: FMA:25053 ! Little toe
xref: MA:0000469 ! foot digit 5
is_a: UBERON:0001466 ! toe
xref: ncithesaurus:Foot_Digit_5 ! Foot Digit 5

[Term]
id: UBERON:0003864
name: middle phalanx of finger
synonym: "middle phalanx of hand" EXACT []
xref: MA:0001394 ! middle phalanx of hand
xref: FMA:75817 ! middle phalanx of finger
is_a: UBERON:0001436 ! phalanx of finger
xref: ncithesaurus:Middle_Phalanx_of_the_Hand ! Middle Phalanx of Hand

[Term]
id: UBERON:0003865
name: distal phalanx of finger
synonym: "distal phalanx of hand" EXACT []
xref: MA:0001388 ! distal phalanx of hand
xref: FMA:75818 ! distal phalanx of finger
is_a: UBERON:0001436 ! phalanx of finger
xref: ncithesaurus:Distal_Phalanx_of_Hand ! Distal Phalanx of Hand

[Term]
id: UBERON:0002234
name: proximal phalanx of finger
alt_id: UBERON:FMA_75816-MA_0001395
comment: This class was created automatically from a combination of ontologies
synonym: "Proximal phalanx of finger" EXACT []
synonym: "proximal phalanx of hand" EXACT []
xref: FMA:75816 ! Proximal phalanx of finger
xref: MA:0001395 ! proximal phalanx of hand
is_a: UBERON:0001436 ! phalanx of finger
xref: ncithesaurus:Proximal_Phalanx_of_Hand ! Proximal Phalanx of Hand

[Term]
id: UBERON:0003866
name: middle phalanx of toe
synonym: "middle phalanx of foot" EXACT []
xref: FMA:75829 ! middle phalanx of toe
xref: MA:0001386 ! middle phalanx of foot
is_a: UBERON:0001449

[Term]
id: UBERON:0003867
name: distal phalanx of toe
synonym: "distal phalanx of foot" EXACT []
xref: FMA:75830 ! distal phalanx of toe
xref: MA:0001380 ! distal phalanx of foot
is_a: UBERON:0001449
xref: ncithesaurus:Distal_Phalanx_of_Foot ! Distal Phalanx of Foot

[Term]
id: UBERON:0003868
name: proximal phalanx of toe
synonym: "Proximal phalanx of toe" EXACT []
synonym: "proximal phalanx of foot" EXACT []
xref: FMA:75828 ! proximal phalanx of toe
xref: MA:0001387 ! proximal phalanx of foot
is_a: UBERON:0001449
xref: ncithesaurus:Proximal_Phalanx_of_Foot ! Proximal Phalanx of Foot

[Term]
id: UBERON:0001436
name: phalanx of finger
def: "a phalanx that is part of a finger[Obol]." [Obol:obol]
alt_id: UBERON:FMA_23914-MA_0000306
comment: This class was created automatically from a combination of ontologies
synonym: "Hand phalanx" EXACT []
synonym: "hand phalanx" EXACT []
synonym: "Phalanx of finger" EXACT []
synonym: "Phalanx of hand" EXACT []
synonym: "phalanx of hand" EXACT []
xref: FMA:23914 ! Phalanx of finger
xref: MA:0000306 ! hand phalanx
is_a: UBERON:0003221 ! phalanx
intersection_of: UBERON:0003221 ! phalanx
intersection_of: part_of UBERON:0002389 ! finger
relationship: part_of UBERON:0002389 ! finger
xref: ncithesaurus:Hand_Phalanx ! Hand Phalanx

[Term]
id: UBERON:0003620
name: hand digit 1 phalanx
xref: MA:0001389 ! hand digit 1 phalanx
intersection_of: UBERON:0003221 ! phalanx
intersection_of: part_of UBERON:0001463 ! hand digit 1
xref: ncithesaurus:Hand_Digit_1_Phalanx ! Hand Digit 1 Phalanx

[Term]
id: UBERON:0003636
name: hand digit 2 phalanx
xref: MA:0001390 ! hand digit 2 phalanx
intersection_of: UBERON:0003221 ! phalanx
intersection_of: part_of UBERON:0003622 ! hand digit 2
xref: ncithesaurus:Hand_Digit_2_Phalanx ! Hand Digit 2 Phalanx

[Term]
id: UBERON:0003637
name: hand digit 3 phalanx
xref: MA:0001391 ! hand digit 3 phalanx
intersection_of: UBERON:0003221 ! phalanx
intersection_of: part_of UBERON:0003623 ! hand digit 3
xref: ncithesaurus:Hand_Digit_3_Phalanx ! Hand Digit 3 Phalanx

[Term]
id: UBERON:0003638
name: hand digit 4 phalanx
xref: MA:0001392 ! hand digit 4 phalanx
intersection_of: UBERON:0003221 ! phalanx
intersection_of: part_of UBERON:0003624 ! hand digit 4
xref: ncithesaurus:Hand_Digit_4_Phalanx ! Hand Digit 4 Phalanx

[Term]
id: UBERON:0003639
name: hand digit 5 phalanx
xref: MA:0001393 ! hand digit 5 phalanx
intersection_of: UBERON:0003221 ! phalanx
intersection_of: part_of UBERON:0003625 ! hand digit 5
xref: ncithesaurus:Hand_Digit_5_Phalanx ! Hand Digit 5 Phalanx

[Term]
id: UBERON:0001449
name: phalanx of toe
alt_id: UBERON:FMA_24493-MA_0000305
comment: This class was created automatically from a combination of ontologies
synonym: "phalanx of foot digit 1" EXACT []
xref: FMA:24493 ! Phalanx of toe
xref: MA:0001381 ! foot digit 1 phalanx
is_a: UBERON:0003221 ! phalanx
intersection_of: UBERON:0003221 ! phalanx
intersection_of: part_of UBERON:0001466 ! toe
relationship: part_of UBERON:0001466 ! toe

[Term]
id: UBERON:0003640
name: foot digit 1 phalanx
xref: MA:0001381 ! foot digit 1 phalanx
xref: MA:0001384 ! foot digit 4 phalanx
xref: MA:0001385 ! foot digit 5 phalanx
intersection_of: UBERON:0003221 ! phalanx
intersection_of: part_of UBERON:0003631 ! foot digit 1
xref: ncithesaurus:Foot_Digit_1_Phalanx ! Foot Digit 1 Phalanx

[Term]
id: UBERON:0003641
name: foot digit 2 phalanx
xref: MA:0001382 ! foot digit 2 phalanx
intersection_of: UBERON:0003221 ! phalanx
intersection_of: part_of UBERON:0003632 ! foot digit 2
xref: ncithesaurus:Foot_Digit_2_Phalanx ! Foot Digit 2 Phalanx

[Term]
id: UBERON:0003642
name: foot digit 3 phalanx
xref: MA:0001383 ! foot digit 3 phalanx
intersection_of: UBERON:0003221 ! phalanx
intersection_of: part_of UBERON:0003633 ! foot digit 3
xref: ncithesaurus:Foot_Digit_3_Phalanx ! Foot Digit 3 Phalanx

[Term]
id: UBERON:0003862
name: foot digit 4 phalanx
xref: MA:0001384 ! foot digit 4 phalanx
intersection_of: UBERON:0003221 ! phalanx
intersection_of: part_of UBERON:0003634 ! foot digit 4
xref: ncithesaurus:Foot_Digit_4_Phalanx ! Foot Digit 4 Phalanx

[Term]
id: UBERON:0003863
name: foot digit 5 phalanx
xref: MA:0001385 ! foot digit 5 phalanx
intersection_of: UBERON:0003221 ! phalanx
intersection_of: part_of UBERON:0003635 ! foot digit 5
xref: ncithesaurus:Foot_Digit_5_Phalanx ! Foot Digit 5 Phalanx

[Term]
id: UBERON:0003643
name: respiratory system arterial blood vessel
xref: MA:0001800 ! respiratory system arterial blood vessel
intersection_of: UBERON:0003509 ! arterial blood vessel
intersection_of: part_of UBERON:0001004 ! respiratory system

[Term]
id: UBERON:0003644
name: kidney arterial blood vessel
xref: MA:0002578 ! kidney arterial blood vessel
intersection_of: UBERON:0003509 ! arterial blood vessel
intersection_of: part_of UBERON:0002113 ! kidney

[Term]
id: UBERON:0003645
name: metacarpal bone of digit 1
xref: FMA:23899 ! First metacarpal bone [SYNONYM: "Metacarpal I" (exact)]
xref: MA:0001364 ! metacarpal bone digit 1
intersection_of: UBERON:0002374 ! metacarpal bone
intersection_of: part_of UBERON:0001463 ! hand digit 1

[Term]
id: UBERON:0003646
name: metacarpal bone of digit 2
xref: FMA:23900 ! Second metacarpal bone [SYNONYM: "Metacarpal II" (exact)]
xref: MA:0001365 ! metacarpal bone digit 2
intersection_of: UBERON:0002374 ! metacarpal bone
intersection_of: part_of UBERON:0003622 ! hand digit 2

[Term]
id: UBERON:0003647
name: metacarpal bone of digit 3
xref: FMA:23901 ! Third metacarpal bone [SYNONYM: "Metacarpal III" (exact)]
xref: MA:0001366 ! metacarpal bone digit 3
intersection_of: UBERON:0002374 ! metacarpal bone
intersection_of: part_of UBERON:0003623 ! hand digit 3

[Term]
id: UBERON:0003648
name: metacarpal bone of digit 4
xref: FMA:23902 ! Fourth metacarpal bone [SYNONYM: "Metacarpal IV" (exact)]
xref: MA:0001367 ! metacarpal bone digit 4
intersection_of: UBERON:0002374 ! metacarpal bone
intersection_of: part_of UBERON:0003624 ! hand digit 4

[Term]
id: UBERON:0003649
name: metacarpal bone of digit 5
xref: FMA:23903 ! Fifth metacarpal bone
xref: MA:0001368 ! metacarpal bone digit 5
intersection_of: UBERON:0002374 ! metacarpal bone
intersection_of: part_of UBERON:0003625 ! hand digit 5

[Term]
id: UBERON:0003650
name: metatarsal bone of digit 1
xref: FMA:24502 ! First metatarsal bone
xref: MA:0001369 ! metatarsal bone digit 1
intersection_of: UBERON:0001448 ! metatarsal bone
intersection_of: part_of UBERON:0003631 ! foot digit 1

[Term]
id: UBERON:0003651
name: metatarsal bone of digit 2
xref: FMA:24503 ! Second metatarsal bone
xref: MA:0001370 ! metatarsal bone digit 2
intersection_of: UBERON:0001448 ! metatarsal bone
intersection_of: part_of UBERON:0003632 ! foot digit 2

[Term]
id: UBERON:0003652
name: metatarsal bone of digit 3
xref: FMA:24504 ! Third metatarsal bone
xref: MA:0001371 ! metatarsal bone digit 3
intersection_of: UBERON:0001448 ! metatarsal bone
intersection_of: part_of UBERON:0003633 ! foot digit 3

[Term]
id: UBERON:0003653
name: metatarsal bone of digit 4
xref: FMA:24505 ! Fourth metatarsal bone
xref: MA:0001372 ! metatarsal bone digit 4
intersection_of: UBERON:0001448 ! metatarsal bone
intersection_of: part_of UBERON:0003634 ! foot digit 4

[Term]
id: UBERON:0003654
name: metatarsal bone of digit 5
xref: FMA:24506 ! Fifth metatarsal bone
xref: MA:0001373 ! metatarsal bone digit 5
intersection_of: UBERON:0001448 ! metatarsal bone
intersection_of: part_of UBERON:0003635 ! foot digit 5

[Term]
id: UBERON:0003655
name: molar tooth
xref: FMA:55638 ! Molar tooth
xref: MA:0000350 ! molar
is_a: UBERON:0001091 ! tooth
xref: ncithesaurus:Molar_Tooth ! Molar Tooth

[Term]
id: UBERON:0003656
name: carpal/tarsal bone
xref: MA:0000295 ! carpal/tarsal bone
is_a: UBERON:0002428 ! limb bone

[Term]
id: UBERON:0003657
name: limb joint
xref: MA:0000691 ! limb joint
intersection_of: UBERON:0000982 ! joint
intersection_of: part_of UBERON:0002101 ! limb

[Term]
id: UBERON:0003658
name: hip muscle
xref: MA:0000657 ! hip muscle
intersection_of: UBERON:0001630 ! muscle organ
intersection_of: part_of UBERON:0001464 ! hip

[Term]
id: UBERON:0003659
name: foot digit muscle
xref: MA:0000648 ! foot digit muscle
intersection_of: UBERON:0001630 ! muscle organ
intersection_of: part_of UBERON:0001466 ! toe

[Term]
id: UBERON:0003660
name: eyelid muscle
xref: MA:0000269 ! eyelid muscle
intersection_of: UBERON:0001630 ! muscle organ
intersection_of: part_of UBERON:0001711 ! eyelid
xref: ncithesaurus:Eyelid_Muscle ! Eyelid Muscle

[Term]
id: UBERON:0003661
name: limb muscle
xref: MA:0000692 ! limb muscle
intersection_of: UBERON:0001630 ! muscle organ
intersection_of: part_of UBERON:0002101 ! limb

[Term]
id: UBERON:0003662
name: forelimb muscle
xref: MA:0000615 ! forelimb muscle
intersection_of: UBERON:0001630 ! muscle organ
intersection_of: part_of UBERON:0002102 ! forelimb
xref: BTO:0000479 ! forelimb muscle

[Term]
id: UBERON:0003663
name: hindlimb muscle
xref: MA:0000663 ! hindlimb muscle
intersection_of: UBERON:0001630 ! muscle organ
intersection_of: part_of UBERON:0002103 ! hindlimb

[Term]
id: UBERON:0003664
name: hand digit muscle
xref: MA:0000624 ! hand digit muscle
intersection_of: UBERON:0001630 ! muscle organ
intersection_of: part_of UBERON:0002389 ! finger

[Term]
id: UBERON:0003665
name: tail muscle
xref: MA:0000699 ! tail muscle
intersection_of: UBERON:0001630 ! muscle organ
intersection_of: part_of UBERON:0002415 ! tail
xref: BTO:0001905 ! tail muscle

[Term]
id: UBERON:0003666
name: upper jaw molar
xref: MA:0001603 ! upper jaw molar
intersection_of: UBERON:0003655 ! molar tooth
intersection_of: part_of UBERON:0001709 ! upper jaw
xref: ncithesaurus:Upper_Jaw_Molar ! Upper Jaw Molar

[Term]
id: UBERON:0003667
name: lower jaw molar
xref: MA:0001602 ! lower jaw molar
intersection_of: UBERON:0003655 ! molar tooth
intersection_of: part_of UBERON:0001710 ! lower jaw
xref: ncithesaurus:Lower_Jaw_Molar ! Lower Jaw Molar

[Term]
id: UBERON:0003668
name: synovial bursa
xref: FMA:9692 ! Synovial bursa
xref: GAID:252 ! synovial bursa
is_a: UBERON:0000062 ! organ
xref: ncithesaurus:Synovial_Bursa ! Synovial Bursa

[Term]
id: UBERON:0003669
name: fascia lata
xref: FMA:13902 ! Fascia lata
xref: GAID:117 ! fascia lata
is_a: UBERON:0000064 ! organ part
xref: ncithesaurus:Fascia_Lata ! Fascia Lata

[Term]
id: UBERON:0003670
name: smegma
xref: FMA:19656 ! Smegma
xref: GAID:1170 ! smegma
is_a: UBERON:0000456 ! secretion
xref: ncithesaurus:Smegma ! Smegma

[Term]
id: UBERON:0003671
name: anterior cruciate ligament
xref: FMA:44614 ! Anterior cruciate ligament
xref: GAID:122 ! anterior cruciate ligament
is_a: UBERON:0000211 ! ligament
relationship: constitutional_part_of UBERON:0001485 ! knee joint
xref: ncithesaurus:Anterior_Cruciate_Ligament ! Anterior Cruciate Ligament

[Term]
id: UBERON:0003672
name: dentition
synonym: "set of teeth" EXACT [FMA:75150]
synonym: "teeth" EXACT [FMA:75150]
synonym: "teeth set" EXACT [FMA:75150]
xref: FMA:75150 ! Dentition
xref: GAID:1249 ! dentition
is_a: UBERON:0000465 ! material anatomical entity
relationship: has_part UBERON:0001091 ! tooth
xref: ncithesaurus:Dentition ! Dentition

[Term]
id: UBERON:0003673
name: ligamentum flavum
synonym: "flaval ligament" RELATED [GAID:126]
xref: FMA:13423 ! Ligamentum flavum
xref: GAID:126 ! ligamentum flavum
is_a: UBERON:0000211 ! ligament
xref: ncithesaurus:Ligamentum_Flavum ! Ligamentum Flavum

[Term]
id: UBERON:0003674
name: cuspid
synonym: "canine teeth" RELATED [GAID:1262]
synonym: "canine tooth" RELATED [GAID:1262]
synonym: "cuspid" EXACT [FMA:55636]
xref: FMA:55636 ! Canine tooth
xref: GAID:1262 ! cuspid
is_a: UBERON:0001091 ! tooth

[Term]
id: UBERON:0003675
name: tooth crown
synonym: "anatomical crown" EXACT [FMA:55623]
synonym: "tooth crown" EXACT [FMA:55623]
xref: FMA:55623 ! Crown of tooth
xref: GAID:1275 ! tooth crown
is_a: UBERON:0000063 ! organ segment
relationship: regional_part_of UBERON:0001091 ! tooth

[Term]
id: UBERON:0003676
name: patellar ligament
synonym: "central band of tendon of quadriceps femoris" EXACT [FMA:44581]
synonym: "ligamentum patella" EXACT [FMA:44581]
xref: FMA:44581 ! Patellar ligament
xref: GAID:128 ! patellar ligament
is_a: UBERON:0000211 ! ligament
relationship: constitutional_part_of UBERON:0001485 ! knee joint
xref: ncithesaurus:Patellar_Ligament ! Patellar Ligament

[Term]
id: UBERON:0003677
name: tooth root
synonym: "radix corona" EXACT [FMA:55624]
synonym: "tooth root" EXACT [FMA:55624]
xref: FMA:55624 ! Root of tooth
xref: GAID:1280 ! tooth root
is_a: UBERON:0000063 ! organ segment
relationship: attached_to UBERON:0001091 ! tooth
relationship: regional_part_of UBERON:0001091 ! tooth

[Term]
id: UBERON:0003678
name: tooth apex
synonym: "apical foramen" RELATED [GAID:1281]
synonym: "tooth apex" EXACT [FMA:63000]
synonym: "tooth apice" RELATED [GAID:1281]
xref: FMA:63000 ! Apex of tooth
xref: GAID:1281 ! tooth apex
is_a: UBERON:0001062 ! anatomical entity
relationship: part_of UBERON:0001091 ! tooth

[Term]
id: UBERON:0003679
name: mouth floor
synonym: "mouth floor" EXACT [FMA:86592]
synonym: "sublingual region" RELATED [GAID:1283]
xref: FMA:86592 ! Floor of mouth
xref: GAID:1283 ! mouth floor
is_a: UBERON:0001062 ! anatomical entity
relationship: part_of UBERON:0000165 ! mouth

[Term]
id: UBERON:0003680
name: posterior cruciate ligament
xref: FMA:44617 ! Posterior cruciate ligament
xref: GAID:129 ! posterior cruciate ligament
is_a: UBERON:0000211 ! ligament
relationship: constitutional_part_of UBERON:0001485 ! knee joint
xref: ncithesaurus:Posterior_Cruciate_Ligament ! Posterior Cruciate Ligament

[Term]
id: UBERON:0003681
name: masticatory muscle
synonym: "masticatory muscles" EXACT [FMA:71437]
synonym: "masticatory muscles set" EXACT [FMA:71437]
xref: FMA:71437 ! Set of masticatory muscles
xref: GAID:145 ! masticatory muscle
is_a: UBERON:0001630 ! muscle organ

[Term]
id: UBERON:0003682
name: palatal muscle
synonym: "palatal muscle" EXACT [FMA:46726]
synonym: "palate muscle" EXACT [FMA:46726]
synonym: "palatine muscle" EXACT [FMA:46726]
xref: FMA:46726 ! Muscle of palate
xref: GAID:151 ! palatal muscle
is_a: UBERON:0002376 ! muscle of head
xref: ncithesaurus:Palatal_Muscle ! Palatal Muscle

[Term]
id: UBERON:0003683
name: rotator cuff
synonym: "musculotendinous cuff" EXACT [FMA:37018]
synonym: "rotator cuff" EXACT [FMA:37018]
xref: FMA:37018 ! Tendinous cuff
xref: GAID:160 ! rotator cuff
is_a: UBERON:0000477 ! anatomical cluster
relationship: constitutional_part_of UBERON:0001467 ! shoulder
xref: ncithesaurus:Rotator_Cuff ! Rotator Cuff

[Term]
id: UBERON:0003685
name: cranial suture
synonym: "cranial sutures" EXACT [FMA:71385]
synonym: "cranial sutures set" EXACT [FMA:71385]
xref: GAID:211 ! cranial suture
xref: MA:0001475 ! cranial suture
is_a: UBERON:0000969 ! suture
intersection_of: UBERON:0000969 ! suture
intersection_of: part_of UBERON:0003128 ! cranium
xref: FMA:71385 ! Set of cranial sutures

[Term]
id: UBERON:0003686
name: tooth socket
synonym: "alveolus dentali" RELATED [GAID:217]
synonym: "alveolus dentalis" RELATED [GAID:217]
synonym: "dental alveolus" RELATED [GAID:217]
synonym: "dental alveolus" EXACT [FMA:57490]
xref: FMA:57490 ! Tooth socket
xref: GAID:217 ! tooth socket
is_a: UBERON:0002553 ! anatomical cavity

[Term]
id: UBERON:0003687
name: foramen magnum
xref: FMA:75306 ! Foramen magnum
xref: GAID:228 ! foramen magnum
is_a: UBERON:0001676 ! occipital bone
xref: ncithesaurus:Foramen_Magnum ! Foramen Magnum

[Term]
id: UBERON:0003688
name: omentum
xref: FMA:14650 ! Omentum
xref: GAID:23 ! omentum
is_a: UBERON:0000063 ! organ segment
relationship: regional_part_of UBERON:0001178 ! visceral peritoneum
xref: ncithesaurus:Omentum ! Omentum

[Term]
id: UBERON:0003689
name: sella turcica
xref: FMA:54709 ! Sella turcica
xref: GAID:231 ! sella turcica
is_a: UBERON:0001677 ! sphenoid bone
xref: ncithesaurus:Sella_Turcica ! Sella Turcica

[Term]
id: UBERON:0003690
name: sacrum
synonym: "sacral bone" EXACT [FMA:16202]
synonym: "sacrum [sacral vertebrae I-V]" EXACT [FMA:16202]
xref: FMA:16202 ! Sacrum
xref: GAID:241 ! sacrum
is_a: UBERON:0001130 ! vertebral column
relationship: regional_part_of UBERON:0001130 ! vertebral column
relationship: regional_part_of UBERON:0002090 ! axial skeleton
xref: ncithesaurus:Sacral_Bone ! Sacral Bone

[Term]
id: UBERON:0003691
name: epidural space
synonym: "extradural space" EXACT [FMA:71228]
xref: FMA:71228 ! Epidural space
xref: GAID:243 ! epidural space
is_a: UBERON:0000464 ! anatomical space

[Term]
id: UBERON:0003692
name: acromioclavicular joint
xref: FMA:25898 ! Acromioclavicular joint
xref: GAID:249 ! acromioclavicular joint
is_a: UBERON:0000982 ! joint
relationship: constitutional_part_of UBERON:0001467 ! shoulder
xref: ncithesaurus:Acromioclavicular_Joint ! Acromioclavicular Joint

[Term]
id: UBERON:0003693
name: retroperitoneal space
synonym: "retroperitoneum" EXACT [FMA:15080]
xref: FMA:15080 ! Retroperitoneal space
xref: GAID:25 ! retroperitoneal space
is_a: UBERON:0000464 ! anatomical space
xref: ncithesaurus:Retroperitoneum ! Retroperitoneum

[Term]
id: UBERON:0003694
name: atlanto-axial joint
synonym: "atlanto axial joint" RELATED [GAID:250]
synonym: "atlantoaxial joint" RELATED [GAID:250]
xref: FMA:25524 ! Atlanto-axial joint
xref: GAID:250 ! atlanto-axial joint
is_a: UBERON:0000982 ! joint
xref: ncithesaurus:Atlanto-axial_Joint ! Atlanto-Axial Joint

[Term]
id: UBERON:0003695
name: metacarpophalangeal joint
synonym: "metacarpal joint" EXACT [FMA:35246]
synonym: "mp joint" EXACT [FMA:35246]
xref: FMA:35246 ! Metacarpophalangeal joint
xref: GAID:255 ! metacarpophalangeal joint
is_a: UBERON:0002217 ! synovial joint
relationship: attached_to UBERON:0002374 ! metacarpal bone
xref: ncithesaurus:Metacarpophalangeal_Joint ! Metacarpophalangeal Joint

[Term]
id: UBERON:0003696
name: metatarsophalangeal joint
synonym: "metatarsal joint" EXACT [FMA:35222]
xref: FMA:35222 ! Metatarsophalangeal joint
xref: GAID:258 ! metatarsophalangeal joint
is_a: UBERON:0001487 ! joint of foot
relationship: attached_to UBERON:0001448 ! metatarsal bone
xref: ncithesaurus:Metatarsophalangeal_Joint ! Metatarsophalangeal Joint

[Term]
id: UBERON:0003697
name: abdominal wall
synonym: "abdominal wall" EXACT [FMA:10429]
xref: FMA:10429 ! Wall of abdomen proper
xref: GAID:26 ! abdominal wall
is_a: UBERON:0000060 ! wall
intersection_of: UBERON:0000060 ! wall
intersection_of: part_of UBERON:0000916 ! abdomen

[Term]
id: UBERON:0003698
name: subtalar joint
synonym: "subtalar joint" EXACT [FMA:35198]
synonym: "talocalcaneal joint" RELATED [GAID:260]
xref: FMA:35198 ! Talocalcaneal joint
xref: GAID:260 ! subtalar joint
is_a: UBERON:0001487 ! joint of foot
is_a: UBERON:0002217 ! synovial joint
xref: ncithesaurus:Subtalar_Joint ! Subtalar Joint

[Term]
id: UBERON:0003699
name: pubic symphysis
synonym: "pubic symphyse" RELATED [GAID:267]
synonym: "symphysis pubis" EXACT [FMA:16950]
xref: FMA:16950 ! Pubic symphysis
xref: GAID:267 ! pubic symphysis
is_a: UBERON:0000982 ! joint
is_a: UBERON:0002216 ! symphysis

[Term]
id: UBERON:0003700
name: temporomandibular joint
xref: FMA:54832 ! Temporomandibular joint
xref: GAID:272 ! temporomandibular joint
is_a: UBERON:0000982 ! joint
relationship: constitutional_part_of UBERON:0000165 ! mouth
xref: MA:0002899 ! temporomandibular joint
xref: BTO:0003674 ! temporomandibular joint

[Term]
id: UBERON:0003701
name: achilles tendon
synonym: "achilles tendon" EXACT [FMA:51061]
xref: FMA:51061 ! Calcaneal tendon
xref: GAID:277 ! achilles tendon
is_a: UBERON:0000043 ! tendon
relationship: regional_part_of UBERON:0001665 ! triceps surae
xref: ncithesaurus:Achilles_Tendon ! Achilles Tendon

[Term]
id: UBERON:0003702
name: inguinal canal
xref: FMA:19928 ! Inguinal canal
xref: GAID:28 ! inguinal canal
is_a: UBERON:0001062 ! anatomical entity

[Term]
id: UBERON:0003703
name: extrahepatic bile duct
synonym: "extrahepatic biliary system" RELATED [GAID:281]
xref: FMA:14678 ! Extrahepatic bile duct
xref: GAID:281 ! extrahepatic bile duct
is_a: UBERON:0002394 ! bile duct
xref: ncithesaurus:Extrahepatic_Bile_Duct ! Extrahepatic Bile Duct

[Term]
id: UBERON:0003704
name: intrahepatic bile duct
xref: FMA:15766 ! Intrahepatic bile duct
xref: GAID:287 ! intrahepatic bile duct
is_a: UBERON:0002394 ! bile duct
xref: ZFA:0005169 ! intrahepatic bile duct
xref: ncithesaurus:Intrahepatic_Bile_Duct ! Intrahepatic Bile Duct

[Term]
id: UBERON:0003705
name: meckel's diverticulum
synonym: "diverticulum of meckel" EXACT [FMA:14967]
synonym: "meckel diverticulum" RELATED [GAID:317]
synonym: "meckel's diverticulum" EXACT [FMA:14967]
synonym: "meckels diverticulum" RELATED [GAID:317]
xref: FMA:14967 ! Ileal diverticulum
xref: GAID:317 ! meckel's diverticulum
is_a: UBERON:0000063 ! organ segment
relationship: part_of UBERON:0002116 ! ileum

[Term]
id: UBERON:0003706
name: vocal cord
synonym: "true vocal cord" EXACT [FMA:55457]
synonym: "vocal cord" EXACT [FMA:55457]
synonym: "vocal fold" RELATED [GAID:344]
xref: FMA:55457 ! Vocal fold
xref: GAID:344 ! vocal cord
is_a: UBERON:0000477 ! anatomical cluster
relationship: part_of UBERON:0001737 ! larynx
xref: ncithesaurus:Vocal_Cord ! Vocal Cord

[Term]
id: UBERON:0003707
name: sinus of valsalva
synonym: "aortic sinus" RELATED [GAID:472]
synonym: "sinus of valsalva" EXACT [FMA:3745]
synonym: "valsalva sinus" RELATED [GAID:472]
xref: FMA:3745 ! Aortic sinus
xref: GAID:472 ! sinus of valsalva
is_a: UBERON:0000947 ! aorta
relationship: part_of UBERON:0000947 ! aorta

[Term]
id: UBERON:0003708
name: carotid sinus
xref: FMA:50094 ! Carotid sinus
xref: GAID:482 ! carotid sinus
is_a: UBERON:0001530 ! common carotid artery

[Term]
id: UBERON:0003709
name: circle of willis
synonym: "cerebral arterial circle" RELATED [GAID:486]
synonym: "circle of willis" EXACT [FMA:50454]
synonym: "willis circle" RELATED [GAID:486]
xref: FMA:50454 ! Cerebral arterial circle
xref: GAID:486 ! circle of willis
is_a: UBERON:0001637 ! artery

[Term]
id: UBERON:0003710
name: vasa vasorum
xref: FMA:77433 ! Vasa vasorum
xref: GAID:526 ! vasa vasorum
is_a: UBERON:0001981 ! blood vessel
xref: ncithesaurus:Vasa_Vasorum ! Vasa Vasorum

[Term]
id: UBERON:0003711
name: brachiocephalic vein
synonym: "brachiocephalic venous tree" EXACT [FMA:4723]
synonym: "innominate vein" RELATED [GAID:529]
synonym: "innominate vein" EXACT [FMA:4723]
xref: FMA:4723 ! Brachiocephalic vein
xref: GAID:529 ! brachiocephalic vein
is_a: UBERON:0001638 ! vein
xref: ncithesaurus:Innominate_Vein ! Innominate Vein

[Term]
id: UBERON:0003712
name: cavernous sinus
xref: FMA:50772 ! Cavernous sinus
xref: GAID:532 ! cavernous sinus
is_a: UBERON:0001638 ! vein
xref: ncithesaurus:Cavernous_Sinus ! Cavernous Sinus

[Term]
id: UBERON:0003713
name: splenic vein
xref: FMA:14331 ! Splenic vein
xref: GAID:541 ! splenic vein
is_a: UBERON:0001638 ! vein
xref: ncithesaurus:Splenic_Vein ! Splenic Vein

[Term]
id: UBERON:0003714
name: nerve tissue
synonym: "nerve tissue" EXACT [FMA:9642]
synonym: "nervous tissue" EXACT [FMA:9642]
synonym: "neural tissue" EXACT [FMA:9642]
xref: FMA:9642 ! Portion of neural tissue
xref: GAID:609 ! nerve tissue
is_a: UBERON:0000479 ! portion of tissue
relationship: part_of UBERON:0001016 ! nervous system
xref: ncithesaurus:Nervous_Tissue ! Nerve Tissue

[Term]
id: UBERON:0003715
name: splanchnic nerve
xref: FMA:5883 ! Splanchnic nerve
xref: GAID:800 ! splanchnic nerve
is_a: UBERON:0001021 ! nerve
relationship: part_of UBERON:0000013 ! sympathetic nervous system

[Term]
id: UBERON:0003716
name: recurrent laryngeal nerve
synonym: "inferior laryngeal nerve" RELATED [GAID:804]
xref: FMA:6246 ! Recurrent laryngeal nerve
xref: GAID:804 ! recurrent laryngeal nerve
is_a: UBERON:0002003 ! peripheral nerve
relationship: branch_of UBERON:0001759 ! vagus nerve

[Term]
id: UBERON:0003717
name: golgi-mazzoni corpuscle
synonym: "golgi mazzoni corpuscle" RELATED [GAID:817]
synonym: "golgi-mazzoni corpuscle" EXACT [FMA:83609]
xref: FMA:83609 ! Corpuscle of Golgi-Mazzoni
xref: GAID:817 ! golgi-mazzoni corpuscle
is_a: UBERON:0000477 ! anatomical cluster
relationship: part_of UBERON:0001016 ! nervous system

[Term]
id: UBERON:0003718
name: muscle spindle
synonym: "muscle stretch receptor" RELATED [GAID:819]
synonym: "neuromuscular spindle" RELATED [GAID:819]
synonym: "neuromuscular spindle" EXACT [FMA:83607]
xref: FMA:83607 ! Muscle spindle
xref: GAID:819 ! muscle spindle
is_a: UBERON:0000477 ! anatomical cluster
relationship: part_of UBERON:0001016 ! nervous system
xref: ncithesaurus:Muscle_Spindle ! Muscle Spindle

[Term]
id: UBERON:0003719
name: pacinian corpuscle
xref: FMA:83604 ! Pacinian corpuscle
xref: GAID:820 ! pacinian corpuscle
is_a: UBERON:0000477 ! anatomical cluster
relationship: part_of UBERON:0000010 ! peripheral nervous system

[Term]
id: UBERON:0003720
name: anterior cranial fossa
xref: FMA:9682 ! Anterior cranial fossa
xref: GAID:83 ! anterior cranial fossa
is_a: UBERON:0002553 ! anatomical cavity
relationship: part_of UBERON:0000033 ! head
xref: ncithesaurus:Anterior_Fossa ! Anterior Cranial Fossa

[Term]
id: UBERON:0003721
name: lingual nerve
xref: FMA:53218 ! Lingual nerve
xref: GAID:835 ! lingual nerve
is_a: UBERON:0001021 ! nerve
relationship: branch_of UBERON:0000375 ! mandibular nerve

[Term]
id: UBERON:0003722
name: middle cranial fossa
xref: FMA:54369 ! Middle cranial fossa
xref: GAID:84 ! middle cranial fossa
is_a: UBERON:0002553 ! anatomical cavity
relationship: part_of UBERON:0000033 ! head
xref: ncithesaurus:Middle_Fossa ! Middle Cranial Fossa

[Term]
id: UBERON:0003723
name: vestibular nerve
synonym: "scarpa ganglion" RELATED [GAID:840]
synonym: "scarpa's ganglion" RELATED [GAID:840]
synonym: "scarpas ganglion" RELATED [GAID:840]
synonym: "vestibular root of acoustic nerve" EXACT [FMA:53401]
synonym: "vestibular root of eighth cranial nerve" EXACT [FMA:53401]
xref: FMA:53401 ! Vestibular nerve
xref: GAID:840 ! vestibular nerve
is_a: UBERON:0001785 ! cranial nerve
relationship: branch_of UBERON:0001648 ! vestibulocochlear nerve
xref: ncithesaurus:Vestibular_Nerve ! Vestibular Nerve

[Term]
id: UBERON:0003724
name: musculocutaneous nerve
synonym: "casserio's nerve" EXACT [FMA:37064]
xref: FMA:37064 ! Musculocutaneous nerve
xref: GAID:844 ! musculocutaneous nerve
is_a: UBERON:0002003 ! peripheral nerve

[Term]
id: UBERON:0003725
name: cervical plexus
synonym: "cervical plexus" EXACT [FMA:5904]
xref: FMA:5904 ! Cervical nerve plexus
xref: GAID:847 ! cervical plexus
is_a: UBERON:0001813 ! somatic nerve plexus

[Term]
id: UBERON:0003726
name: thoracic nerve
synonym: "pectoral nerve" RELATED [GAID:857]
synonym: "thoracic spinal nerve" EXACT [FMA:5860]
xref: FMA:5860 ! Thoracic nerve
xref: GAID:857 ! thoracic nerve
is_a: UBERON:0001780 ! spinal nerve

[Term]
id: UBERON:0003727
name: intercostal nerve
synonym: "anterior ramus of thoracic nerve" EXACT [FMA:6028]
synonym: "anterior ramus of thoracic spinal nerve" EXACT [FMA:6028]
synonym: "ramus anterior, nervus thoracicus" EXACT [FMA:6028]
synonym: "thoracic anterior ramus" EXACT [FMA:6028]
synonym: "ventral ramus of thoracic spinal nerve" EXACT [FMA:6028]
xref: FMA:6028 ! Intercostal nerve
xref: GAID:858 ! intercostal nerve
is_a: UBERON:0001780 ! spinal nerve
xref: ncithesaurus:Intercostal_Nerve ! Intercostal Nerve

[Term]
id: UBERON:0003728
name: mediastinum
synonym: "mediastinal part of chest" EXACT [FMA:9826]
xref: FMA:9826 ! Mediastinum
xref: GAID:94 ! mediastinum
is_a: UBERON:0002224 ! thoracic cavity
xref: ncithesaurus:Mediastinum ! Mediastinum

[Term]
id: UBERON:0003729
name: mouth mucosa
synonym: "buccal mucosa" RELATED [GAID:951]
synonym: "mouth mucosa" EXACT [FMA:59660]
synonym: "mucous membrane of mouth" EXACT [FMA:59660]
synonym: "oral mucosa" RELATED [GAID:951]
synonym: "oral part of viscerocranial mucosa" EXACT [FMA:59660]
xref: FMA:59660 ! Mucosa of mouth
xref: GAID:951 ! mouth mucosa
is_a: UBERON:0000344 ! mucosa
intersection_of: UBERON:0000344 ! mucosa
intersection_of: part_of UBERON:0000165 ! mouth


[Term]
id: UBERON:0003824
name: thoracic segment nerve
xref: MA:0000562
intersection_of: UBERON:0001021
intersection_of: part_of UBERON:0000915

[Term]
id: UBERON:0003825
name: abdominal segment nerve
xref: MA:0000528
intersection_of: UBERON:0001021
intersection_of: part_of UBERON:0002417

[Term]
id: UBERON:0003826
name: upper leg bone
xref: MA:0000682
intersection_of: UBERON:0001474
intersection_of: part_of UBERON:0000376

[Term]
id: UBERON:0003827
name: thoracic segment bone
xref: MA:0000559
intersection_of: UBERON:0001474
intersection_of: part_of UBERON:0000915

[Term]
id: UBERON:0003828
name: abdominal segment bone
xref: MA:0000525
intersection_of: UBERON:0001474
intersection_of: part_of UBERON:0002417

[Term]
id: UBERON:0003829
name: urethra muscle
xref: MA:0002649
intersection_of: UBERON:0001630
intersection_of: part_of UBERON:0000057

[Term]
id: UBERON:0003830
name: thoracic segment muscle
xref: MA:0000561
intersection_of: UBERON:0001630
intersection_of: part_of UBERON:0000915

[Term]
id: UBERON:0003831
name: respiratory system muscle
xref: MA:0001828
intersection_of: UBERON:0001630
intersection_of: part_of UBERON:0001004

[Term]
id: UBERON:0003832
name: esophagus muscle
xref: MA:0002682
intersection_of: UBERON:0001630
intersection_of: part_of UBERON:0001043

[Term]
id: UBERON:0003833
name: abdominal segment muscle
xref: MA:0000527
intersection_of: UBERON:0001630
intersection_of: part_of UBERON:0002417

[Term]
id: UBERON:0003834
name: thoracic segment blood vessel
xref: MA:0000558
intersection_of: UBERON:0001981
intersection_of: part_of UBERON:0000915

[Term]
id: UBERON:0003835
name: abdominal segment blood vessel
xref: MA:0000524
intersection_of: UBERON:0001981
intersection_of: part_of UBERON:0002417

[Term]
id: UBERON:0003836
name: abdominal segment skin
xref: MA:0000530
intersection_of: UBERON:0002097
intersection_of: part_of UBERON:0002417

[Term]
id: UBERON:0003837
name: thoracic segment connective tissue
xref: MA:0000560
intersection_of: UBERON:0002384
intersection_of: part_of UBERON:0000915

[Term]
id: UBERON:0003838
name: abdominal segment connective tissue
xref: MA:0000526
intersection_of: UBERON:0002384
intersection_of: part_of UBERON:0002417

[Term]
id: UBERON:0003839
name: forelimb joint
xref: MA:0000614
intersection_of: UBERON:0003657
intersection_of: part_of UBERON:0002102

[Term]
id: UBERON:0003840
name: hindlimb joint
xref: MA:0000662
intersection_of: UBERON:0003657
intersection_of: part_of UBERON:0002103

[Term]
id: UBERON:0003841
name: autopod joint
xref: MA:0002715
intersection_of: UBERON:0003657
intersection_of: part_of UBERON:0002470


[Term]
id: UBERON:0003842
name: neural lumen
xref: HOG:0001119
intersection_of: UBERON:0000464
intersection_of: OBO_REL:surrounded_by CL:0000540

[Term]
id: UBERON:0003843
name: tooth epithelium
xref: HOG:0001443
intersection_of: UBERON:0000483
intersection_of: part_of UBERON:0001091
xref: ZFA:0005135 ! primary dental epithelium

[Term]
id: UBERON:0003844
name: upper eyelid epithelium
xref: HOG:0000638
intersection_of: UBERON:0000483
intersection_of: part_of UBERON:0001712

[Term]
id: UBERON:0003845
name: lower eyelid epithelium
xref: HOG:0000637
intersection_of: UBERON:0000483
intersection_of: part_of UBERON:0001713

[Term]
id: UBERON:0003846
name: thymus epithelium
xref: HOG:0001426
intersection_of: UBERON:0000483
intersection_of: part_of UBERON:0002370
xref: MA:0000768 ! thymus epithelium

[Term]
id: UBERON:0003847
name: thyroid artery
xref: HOG:0001366
intersection_of: UBERON:0001637
intersection_of: part_of UBERON:0002046
xref: MA:0002066 ! thyroid artery
xref: ncithesaurus:Thyroid_Artery ! Thyroid Artery

[Term]
id: UBERON:0003848
name: gonadal vein
xref: HOG:0001340
intersection_of: UBERON:0001638
intersection_of: part_of UBERON:0000991

[Term]
id: UBERON:0003849
name: neural crest midbrain
xref: HOG:0000796
intersection_of: UBERON:0001891
intersection_of: part_of UBERON:0002342
xref: ZFA:0000935 ! neural crest midbrain

[Term]
id: UBERON:0003850
name: neural crest telencephalon
xref: HOG:0000799
intersection_of: UBERON:0001893
intersection_of: part_of UBERON:0002342
xref: ZFA:0000812 ! neural crest telencephalon

[Term]
id: UBERON:0003851
name: neural crest diencephalon
xref: HOG:0000798
intersection_of: UBERON:0001894
intersection_of: part_of UBERON:0002342
xref: ZFA:0000811 ! neural crest diencephalon

[Term]
id: UBERON:0003852
name: neural crest hindbrain
xref: HOG:0001210
intersection_of: UBERON:0002028
intersection_of: part_of UBERON:0002342
xref: YMB:0007000 ! neural crest hindbrain

[Term]
id: UBERON:0003853
name: neural crest spinal cord
xref: HOG:0001006
intersection_of: UBERON:0002240
intersection_of: part_of UBERON:0002342

[Term]
id: UBERON:0003854
name: spinal cord neural plate
xref: HOG:0000439
intersection_of: UBERON:0003075
intersection_of: part_of UBERON:0002240
xref: ZFA:0007021 ! spinal cord neural plate

[Term]
id: UBERON:0003855
name: gonad mesenchyme
xref: HOG:0001090
intersection_of: UBERON:0003104
intersection_of: part_of UBERON:0000991

[Term]
id: UBERON:0003856
name: tooth mesenchyme
xref: HOG:0001444
intersection_of: UBERON:0003104
intersection_of: part_of UBERON:0001091

[Term]
id: UBERON:0003857
name: upper eyelid mesenchyme
xref: HOG:0001093
intersection_of: UBERON:0003104
intersection_of: part_of UBERON:0001712

[Term]
id: UBERON:0003858
name: lower eyelid mesenchyme
xref: HOG:0001036
intersection_of: UBERON:0003104
intersection_of: part_of UBERON:0001713

[Term]
id: UBERON:0003859
name: forelimb mesenchyme
xref: HOG:0001109
intersection_of: UBERON:0003104
intersection_of: part_of UBERON:0002102

[Term]
id: UBERON:0003860
name: hindlimb mesenchyme
xref: HOG:0001074
intersection_of: UBERON:0003104
intersection_of: part_of UBERON:0002103

[Term]
id: UBERON:0003869
name: presumptive ganglion
intersection_of: UBERON:0000479 ! portion of tissue
intersection_of: OBO_REL:develops_into UBERON:0000045 ! ganglion


[Term]
id: UBERON:0003874
name: presumptive ventricle
intersection_of: UBERON:0000479 ! portion of tissue
intersection_of: OBO_REL:develops_into UBERON:0002300 ! ventricle

[Term]
id: UBERON:0003876
name: hippocampal region
synonym: "subdivision of hippocampus" EXACT []
synonym: "hippocampus region" EXACT []
is_a: UBERON:0002616 ! regional part of brain
relationship: part_of UBERON:0001954
intersection_of: UBERON:0002616 ! regional part of brain
intersection_of: part_of UBERON:0001954
xref: FMA:74041 ! Subdivision of hippocampus
xref: MA:0002428 ! hippocampus region

[Term]
id: UBERON:0003881
name: CA1 field of hippocampus
synonym: "CA1" EXACT []
synonym: "CA1 field" EXACT []
synonym: "hippocampus CA1" EXACT []
synonym: "region 1 of Ammon's horn" EXACT []
is_a: UBERON:0003876 ! hippocampal region
xref: MA:0000950 ! hippocampus CA1 [subclass: "hippocampus region"]
xref: FMA:74042 ! CA1 field

[Term]
id: UBERON:0003882
name: CA2 field of hippocampus
synonym: "CA2" EXACT []
synonym: "CA2 field" EXACT []
synonym: "hippocampus CA2" EXACT []
synonym: "region 2 of Ammon's horn" EXACT []
is_a: UBERON:0003876 ! hippocampal region
xref: MA:0000951 ! hippocampus CA2 [subclass: "hippocampus region"]
xref: FMA:74044 ! CA2 field

[Term]
id: UBERON:0003883
name: CA3 field of hippocampus
synonym: "CA3" EXACT []
synonym: "CA3 field" EXACT []
synonym: "hippocampus CA3" EXACT []
synonym: "region 3 of Ammon's horn" EXACT []
is_a: UBERON:0003876 ! hippocampal region
xref: MA:0000952 ! hippocampus CA3 [subclass: "hippocampus region"]
xref: FMA:74045 ! CA3 field

[Term]
id: UBERON:0003884
name: CA4 field of hippocampus
synonym: "CA4" EXACT []
synonym: "CA4 field" EXACT []
synonym: "hippocampus CA4" EXACT []
synonym: "region 4 of Ammon's horn" EXACT []
is_a: UBERON:0003876 ! hippocampal region
xref: MA:0000953 ! hippocampus CA4 [subclass: "hippocampus region"]
xref: FMA:75741 ! CA4 field


[Term]
id: UBERON:0003894
name: liver primordium
def: "A primordium that is fated to develop into a liver." [GOC:obol]
is_a: UBERON:0001048 ! primordium
relationship: develops_into UBERON:0002107 ! liver
relationship: part_of UBERON:0002423 ! hepatobiliary system
intersection_of: UBERON:0001048 ! primordium
intersection_of: develops_into UBERON:0002107 ! liver
synonym: "liver bud" EXACT [ZFA:0000124, XAO:0003266]
xref: XAO:0003266 ! liver primordium
xref: ZFA:0000124 ! liver primordium

[Term]
id: UBERON:0003895
name: hypaxial myotome region
def: "trunk muscle that lie ventral to the horizontal septum of the vertebrae." [Wikipedia:Epaxial_and_Hypaxial_muscles]
is_a: UBERON:0001134 ! skeletal muscle tissue
relationship: part_of UBERON:0003082 ! myotome
synonym: "hypaxial muscle" EXACT [ZFA:0001085]
synonym: "body wall muscle" RELATED [XAO:0003228]
xref: XAO:0003228 ! hypaxial muscle
xref: ZFA:0001085 ! hypaxial myotome region

[Term]
id: UBERON:0003896
name: muscle of body wall
comment: TODO - check trunk vs wall of trunk
intersection_of: UBERON:0001630 ! muscle organ
intersection_of: part_of UBERON:0000309 ! body wall
relationship: develops_from UBERON:0003082 ! myotome

[Term]
id: UBERON:0003897
name: axial muscle
def: "A skeletal muscle of the trunk or head." []
is_a: UBERON:0001134 ! skeletal muscle tissue
union_of: UBERON:0003898
union_of: UBERON:0003899

[Term]
id: UBERON:0003898
name: skeletal muscle of trunk
def: "A skeletal muscle of the trunk." []
intersection_of: UBERON:0001134 ! skeletal muscle tissue
intersection_of: part_of UBERON:0002100 ! trunk

[Term]
id: UBERON:0003899
name: skeletal muscle of head
def: "A skeletal muscle of the head." []
intersection_of: UBERON:0001134 ! skeletal muscle tissue
intersection_of: part_of UBERON:0000033 ! head

[Term]
id: UBERON:0003900
name: epaxial muscle
def: "trunk muscle that lies dorsal to the septum." [Wikipedia:Epaxial_and_Hypaxial_muscles]
is_a: UBERON:0003898
xref: AAO:0000142 ! epaxial_muscles
xref: XAO:0003229 ! epaxial muscle
xref: ZFA:0000349 ! epaxialis
xref: TAO:0000349

[Term]
id: UBERON:0003901
name: horizontal myoseptum
def: "A connective tissue partition developing at the apex of the chevron-shaped myotome and separating dorsal (epaxial) and ventral (hypaxial) body wall muscle masses." [ZFA:0000671]
is_a: UBERON:0003037 ! septum
xref: ZFA:0000671 ! horizontal myoseptum
relationship: adjacent_to UBERON:0003900
relationship: adjacent_to UBERON:0003895

[Typedef]
id: adjacent_to
name: adjacent_to
xref: OBO_REL:adjacent_to

[Typedef]
id: anterior_to
name: anterior_to
is_transitive: true
created_by: cjm
creation_date: 2009-07-31T02:15:46Z

[Typedef]
id: attached_to
name: attached_to
xref: attaches_to ! attaches_to

[Typedef]
id: branch_of
name: branch_of

[Typedef]
id: capable_of
name: capable_of
comment: capable_of <-> bearer_of . realized_by

[Typedef]
id: coincides_with
name: coincides_with
def: "Relation between occurrents, shares start and end boundaries." [Allen:starts, UBERON:cjm]
synonym: "coincides_with" EXACT []
domain: UBERON:0000105 ! life cycle stage
is_a: finishes ! finishes
is_a: starts ! starts
intersection_of: finishes ! finishes
intersection_of: starts ! starts

[Typedef]
id: constitutional_part_of
name: constitutional_part_of

[Typedef]
id: contains
name: contains
xref: OBO_REL:contains
created_by: cjm
creation_date: 2009-07-30T10:19:28Z
xref: ncithesaurus:Container ! Container

[Typedef]
id: continuous_with
name: continuous_with

[Typedef]
id: develops_from
name: develops_from
is_transitive: true
holds_over_chain: part_of develops_from
transitive_over: part_of ! part_of

[Typedef]
id: develops_into
name: develops_into

[Typedef]
id: directly_preceded_by
name: directly_preceded_by
domain: UBERON:0000105 ! life cycle stage
range: UBERON:0000105 ! life cycle stage
holds_over_chain: has_start end_of
is_a: preceded_by ! preceded_by

[Typedef]
id: disconnected_from
name: disconnected_from
def: "A is disconnected_from B if they have no parts in common." [SO:cjm]
synonym: "non_overlapping_with" EXACT []
synonym: "shares_no_parts_with" EXACT []
disjoint_over: part_of ! part_of
is_metadata_tag: true

[Typedef]
id: end_of
name: end_of
domain: UBERON:0000103 ! life cycle stage boundary
range: UBERON:0000105 ! life cycle stage

[Typedef]
id: existence_ends_at
name: existence_ends_at
def: "instance: c existence_ends_at e iff c exists_at e and not ( exists e2 : c exists_at e2 and e before e2). Type: all Cc, exists Ee, c existence_ends_at e." [UBERON:cjm]
domain: UBERON:0001062 ! anatomical entity
range: UBERON:0000103 ! life cycle stage boundary

[Typedef]
id: existence_ends_before
name: existence_ends_before
def: "Relation between continuant c and occurrent s, such that every instance of c ceases to exist before s." [UBERON:cjm]
domain: UBERON:0001062 ! anatomical entity
range: UBERON:0000105 ! life cycle stage
holds_over_chain: existence_ends_during precedes

[Typedef]
id: existence_ends_during
name: existence_ends_during
def: "Relation between continuant c and occurrent s, such that every instance of c ceases to exist during some s, if it does not die prematurely." [UBERON:cjm]
domain: UBERON:0001062 ! anatomical entity
range: UBERON:0000105 ! life cycle stage
transitive_over: part_of ! part_of

[Typedef]
id: existence_ends_with
name: existence_ends_with
def: "Relation between continuant and occurrent, such that c ceases to exist at the end of p." [UBERON:cjm]
domain: UBERON:0001062 ! anatomical entity
range: UBERON:0000105 ! life cycle stage

[Typedef]
id: existence_starts_after
name: existence_starts_after
def: "Relation between continuant c and occurrent s, such that every instance of c comes into existing after some s has completed." [UBERON:cjm]
domain: UBERON:0001062 ! anatomical entity
range: UBERON:0000105 ! life cycle stage
holds_over_chain: existence_starts_during preceded_by
disjoint_from: existence_starts_during ! existence_starts_during

[Typedef]
id: existence_starts_and_ends_during
name: existence_starts_and_ends_during
domain: UBERON:0001062 ! anatomical entity
range: UBERON:0000105 ! life cycle stage
is_a: existence_ends_during ! existence_ends_during
is_a: existence_starts_during ! existence_starts_during
intersection_of: existence_ends_during ! existence_ends_during
intersection_of: existence_starts_during ! existence_starts_during

[Typedef]
id: existence_starts_at
name: existence_starts_at
def: "instance: c existence_starts_at e iff c exists_at e and not ( exists e2 : c exists_at e2 and e2 before e). Type: all Cc, exists Ee, c existence_starts_at e." [UBERON:cjm]
domain: UBERON:0001062 ! anatomical entity
range: UBERON:0000103 ! life cycle stage boundary

[Typedef]
id: existence_starts_during
name: existence_starts_during
def: "Relation between continuant c and occurrent s, such that every instance of c comes into existing during some s." [UBERON:cjm]
domain: UBERON:0001062 ! anatomical entity
range: UBERON:0000105 ! life cycle stage
transitive_over: part_of ! part_of

[Typedef]
id: existence_starts_or_ends_during
name: existence_starts_or_ends_during
domain: UBERON:0001062 ! anatomical entity
range: UBERON:0000105 ! life cycle stage
union_of: existence_ends_during ! existence_ends_during
union_of: existence_starts_during ! existence_starts_during

[Typedef]
id: existence_starts_with
name: existence_starts_with
def: "Relation between continuant and occurrent, such that c comes into existence at the start of p." [UBERON:cjm]
domain: UBERON:0001062 ! anatomical entity
range: UBERON:0000105 ! life cycle stage
holds_over_chain: existence_starts_at start_of

[Typedef]
id: exists_during
name: exists_during
domain: UBERON:0001062 ! anatomical entity
range: UBERON:0000105 ! life cycle stage

[Typedef]
id: finishes
name: finishes
def: "Relation between occurrents, shares an end boundary with." [Allen:starts, UBERON:cjm]
is_a: part_of
domain: UBERON:0000105 ! life cycle stage
range: UBERON:0000105 ! life cycle stage
xref: ncithesaurus:Finish ! Finish

[Typedef]
id: has_end
name: has_end
domain: UBERON:0000105 ! life cycle stage
range: UBERON:0000103 ! life cycle stage boundary

[Typedef]
id: has_part
name: has_part
is_transitive: true
relationship: inverse_of_on_instance_level part_of ! part_of

[Typedef]
id: has_quality
name: has_quality

[Typedef]
id: has_start
name: has_start
domain: UBERON:0000105 ! life cycle stage
range: UBERON:0000103 ! life cycle stage boundary

[Typedef]
id: inheres_in_progenitor_of
name: inheres_in_progenitor_of

[Typedef]
id: contained_in
name: contained_in
xref: OBO_REL:contained_in

[Typedef]
id: location_of
name: location_of
created_by: cjm
creation_date: 2009-07-30T10:22:21Z

[Typedef]
id: overlaps
name: overlaps
created_by: cjm
creation_date: 2009-04-12T04:08:35Z
xref: ncithesaurus:Overlap ! Overlap

[Typedef]
id: part_of
name: part_of
subset: uberon_slim
xref: OBO_REL:part_of ! part of
is_transitive: true

[Typedef]
id: participates_in_regulation_of
name: participates_in_regulation_of

[Typedef]
id: preceded_by
name: preceded_by
xref: OBO_REL:preceded_by ! preceded by
domain: UBERON:0000105 ! life cycle stage
range: UBERON:0000105 ! life cycle stage
is_transitive: true
disjoint_from: part_of ! part_of

[Typedef]
id: precedes
name: precedes
xref: OBO_REL:precedes
domain: UBERON:0000105 ! life cycle stage
range: UBERON:0000105 ! life cycle stage
is_transitive: true
relationship: inverse_of_on_instance_level preceded_by ! preceded_by

[Typedef]
id: secretes
name: secretes

[Typedef]
id: separated_from_by
name: separated_from_by
formula: "(forall (x y z) (iff (separated_from_by x y z) (and (adjacent_to x z) (adjacent_to y z) (disconnected_from x y))))" CLIF []

[Typedef]
id: site_of_production_of
name: site_of_production_of
created_by: cjm
creation_date: 2009-08-06T11:12:35Z

[Typedef]
id: start_of
name: start_of
domain: UBERON:0000103 ! life cycle stage boundary
range: UBERON:0000105 ! life cycle stage

[Typedef]
id: starts
name: starts
def: "Relation between occurrents, shares a start boundary with." [Allen:starts, UBERON:cjm]
is_a: part_of
domain: UBERON:0000105 ! life cycle stage
range: UBERON:0000105 ! life cycle stage
holds_over_chain: has_start start_of

[Typedef]
id: surrounded_by
name: surrounded_by
domain: UBERON:0001062 ! anatomical entity
range: UBERON:0001062 ! anatomical entity

[Typedef]
id: surrounds
name: surrounds
domain: UBERON:0001062 ! anatomical entity
range: UBERON:0001062 ! anatomical entity
xref: ncithesaurus:Surrounding ! Surrounding

[Typedef]
id: bounds
name: bounds
domain: UBERON:0001062 ! anatomical entity
range: UBERON:0001062 ! anatomical entity

[Typedef]
id: systemic_part_of
name: systemic_part_of
is_a: part_of ! part_of

[Typedef]
id: transports
name: transports

[Typedef]
id: connects
name: connects

[Typedef]
id: only_in_taxon
name: only_in_taxon