37 56 16 http://purl.obolibrary.org/obo/VariO_0341 RNA insertion editing 'RNA insertion editing' SubClassOf 'RNA modification by editing' http://purl.obolibrary.org/obo/VariO_0340 RNA substitution editing 'RNA substitution editing' SubClassOf 'RNA modification by editing' http://purl.obolibrary.org/obo/VariO_0342 RNA deletion editing 'RNA deletion editing' SubClassOf 'RNA modification by editing' http://purl.obolibrary.org/obo/VariO_0345 RNA degradation by nonstop decay 'RNA degradation by nonstop decay' SubClassOf 'RNA degradation by decay' http://purl.obolibrary.org/obo/VariO_0344 RNA degradation by decay 'RNA degradation by decay' SubClassOf 'effect on RNA degradation' http://purl.obolibrary.org/obo/VariO_0347 RNA degradation by nonsense-mediated decay 'RNA degradation by nonsense-mediated decay' SubClassOf 'RNA degradation by decay' http://purl.obolibrary.org/obo/VariO_0346 RNA degradation by no-go decay 'RNA degradation by no-go decay' SubClassOf 'RNA degradation by decay' http://purl.obolibrary.org/obo/VariO_0348 RNA modification by nonsense-associated altered splicing 'RNA modification by nonsense-associated altered splicing' SubClassOf 'variation affecting RNA structure' http://purl.obolibrary.org/obo/VariO_0353 non-coding region of protein coding mRNA 'non-coding region of protein coding mRNA' SubClassOf 'protein coding RNA' 'non-coding region of protein coding mRNA' SubClassOf 'non-protein coding RNA' http://purl.obolibrary.org/obo/VariO_0355 RNA polyadenylation 'RNA polyadenylation' SubClassOf 'RNA modification by maturation' http://purl.obolibrary.org/obo/VariO_0358 RNA three prime end processing 'RNA three prime end processing' SubClassOf 'RNA modification by maturation' http://purl.obolibrary.org/obo/VariO_0115 effect on protein packing 'effect on protein packing' SubClassOf 'effect on amino acid size' 'effect on protein packing' SubClassOf 'effect on protein tertiary structure' http://purl.obolibrary.org/obo/VariO_0357 RNA five prime capping 'RNA five prime capping' SubClassOf 'RNA modification by maturation' http://purl.obolibrary.org/obo/VariO_0359 RNA modification 'RNA modification' SubClassOf 'RNA modification by maturation' http://purl.obolibrary.org/obo/VariO_0361 RNA nucleoside sugar modification 'RNA nucleoside sugar modification' SubClassOf 'RNA modification' 'RNA nucleoside sugar modification' SubClassOf 'variation affecting RNA structure' http://purl.obolibrary.org/obo/VariO_0360 RNA base modification 'RNA base modification' SubClassOf 'RNA modification' http://purl.obolibrary.org/obo/VariO_0367 five prime cis splice site 'five prime cis splice site' SubClassOf 'cis splicing' 'five prime cis splice site' SubClassOf http://purl.obolibrary.org/obo/VariO_0508 http://purl.obolibrary.org/obo/VariO_0366 splicing at recursive splice site 'splicing at recursive splice site' SubClassOf 'cis splicing' 'splicing at recursive splice site' SubClassOf http://purl.obolibrary.org/obo/VariO_0508 http://purl.obolibrary.org/obo/VariO_0373 cryptic splice site activation 'cryptic splice site activation' SubClassOf 'RNA splicing' 'cryptic splice site activation' SubClassOf http://purl.obolibrary.org/obo/VariO_0504 http://purl.obolibrary.org/obo/VariO_0370 three prime cis splice site 'three prime cis splice site' SubClassOf 'cis splicing' 'three prime cis splice site' SubClassOf http://purl.obolibrary.org/obo/VariO_0508 http://purl.obolibrary.org/obo/VariO_0424 effect on DNA-RNA hybrid 'effect on DNA-RNA hybrid' SubClassOf http://purl.obolibrary.org/obo/vario.obo#part_of some 'effect on DNA tertiary structure' 'effect on DNA-RNA hybrid' SubClassOf http://purl.obolibrary.org/obo/vario.obo#part_of some 'effect on RNA tertiary structure' 'effect on DNA-RNA hybrid' SubClassOf 'effect on DNA form' 'effect on DNA-RNA hybrid' SubClassOf 'effect on RNA tertiary structure' http://purl.obolibrary.org/obo/VariO_0433 effect on D loop 'effect on D loop' SubClassOf 'effect on intermolecular DNA triple helix' http://purl.obolibrary.org/obo/VariO_0432 effect on T loop 'effect on T loop' SubClassOf 'effect on DNA-RNA hybrid' 'effect on T loop' SubClassOf 'effect on DNA double helix' http://purl.obolibrary.org/obo/VariO_0313 transition 'transition' SubClassOf http://purl.obolibrary.org/obo/vario.obo#part_of some 'RNA substitution' 'transition' SubClassOf 'DNA substitution' 'transition' SubClassOf http://purl.obolibrary.org/obo/owl#_topObjectProperty some 'RNA substitution' 'transition' SubClassOf 'RNA substitution' http://purl.obolibrary.org/obo/VariO_0316 transversion 'transversion' SubClassOf 'RNA substitution' 'transversion' SubClassOf 'DNA substitution' http://purl.obolibrary.org/obo/VariO_0436 matured RNA 'matured RNA' SubClassOf 'RNA variation of non-genetic origin' 'matured RNA' SubClassOf 'modified RNA' http://purl.obolibrary.org/obo/VariO_0334 edited RNA 'edited RNA' SubClassOf 'RNA variation of non-genetic origin' 'edited RNA' SubClassOf 'RNA variation classification' http://purl.obolibrary.org/obo/VariO_0339 RNA modification by editing 'RNA modification by editing' SubClassOf 'variation affecting RNA structure' http://purl.obolibrary.org/obo/VariO_0404 group II intron 'group II intron' SubClassOf 'non-protein coding RNA' 'group II intron' SubClassOf http://purl.obolibrary.org/obo/VariO_0472 http://purl.obolibrary.org/obo/VariO_0403 group I intron 'group I intron' SubClassOf 'non-protein coding RNA' 'group I intron' SubClassOf http://purl.obolibrary.org/obo/VariO_0472 http://purl.obolibrary.org/obo/VariO_0406 RNA degradation by Staufen-mediated decay 'RNA degradation by Staufen-mediated decay' SubClassOf 'RNA degradation by decay' http://purl.obolibrary.org/obo/VariO_0411 alternatively spliced RNA 'alternatively spliced RNA' SubClassOf http://purl.obolibrary.org/obo/vario.obo#part_of some 'alternative form of RNA' 'alternatively spliced RNA' SubClassOf 'alternative form of RNA' http://purl.obolibrary.org/obo/VariO_0187 copy number variation 'copy number variation' SubClassOf 'chromosomal deletion' 'copy number variation' SubClassOf 'chromosomal amplification' http://purl.obolibrary.org/obo/VariO_0395 self-cleavage by ribozyme activity 'self-cleavage by ribozyme activity' SubClassOf 'variation affecting RNA structure' http://purl.obolibrary.org/obo/VariO_0158 nucleosome positioning 'nucleosome positioning' SubClassOf 'chromatin structure variation' 'nucleosome positioning' SubClassOf 'epigenetic DNA modification' http://purl.obolibrary.org/obo/VariO_0173 effect on nucleic acid G-quadruplex 'effect on nucleic acid G-quadruplex' SubClassOf 'effect on four-stranded RNA' 'effect on nucleic acid G-quadruplex' SubClassOf 'effect on four-stranded DNA' http://purl.obolibrary.org/obo/VariO_0175 effect on DNA triple helix 'effect on DNA triple helix' SubClassOf 'effect on DNA tertiary structure' 'effect on DNA triple helix' SubClassOf 'effect on DNA form' http://purl.obolibrary.org/obo/VariO_0460 pre-mRNA 'pre-mRNA' SubClassOf 'protein coding RNA' http://purl.obolibrary.org/obo/VariO_0462 circular RNA 'circular RNA' SubClassOf 'protein coding RNA' http://purl.obolibrary.org/obo/VariO_0461 mRNA 'mRNA' SubClassOf 'pre-mRNA' http://purl.obolibrary.org/obo/VariO_0464 non-coding sense RNA 'non-coding sense RNA' SubClassOf 'regulatory RNA' http://purl.obolibrary.org/obo/VariO_0463 antisense RNA 'antisense RNA' SubClassOf 'regulatory RNA' http://purl.obolibrary.org/obo/VariO_0466 retrotransposon RNA intermediate 'retrotransposon RNA intermediate' SubClassOf 'functional non-coding RNA' http://purl.obolibrary.org/obo/VariO_0465 functional non-coding RNA 'functional non-coding RNA' SubClassOf 'non-protein coding RNA' http://purl.obolibrary.org/obo/VariO_0468 transfer RNA 'transfer RNA' SubClassOf 'translation related non-coding RNA' http://purl.obolibrary.org/obo/VariO_0467 translation related non-coding RNA 'translation related non-coding RNA' SubClassOf 'functional non-coding RNA' http://purl.obolibrary.org/obo/VariO_0469 large subunit ribosomal RNA 'large subunit ribosomal RNA' SubClassOf 'ribosomal RNA' http://purl.obolibrary.org/obo/VariO_0471 intron 'intron' SubClassOf 'translation related non-coding RNA' http://purl.obolibrary.org/obo/VariO_0470 small subunit ribosomal RNA 'small subunit ribosomal RNA' SubClassOf 'ribosomal RNA' http://purl.obolibrary.org/obo/VariO_0473 spliceosomal intron 'spliceosomal intron' SubClassOf 'intron' http://purl.obolibrary.org/obo/VariO_0472 self-splicing intron 'self-splicing intron' SubClassOf 'intron' http://purl.obolibrary.org/obo/VariO_0475 telomerase RNA 'telomerase RNA' SubClassOf 'functional non-coding RNA' http://purl.obolibrary.org/obo/VariO_0474 intron retention 'intron retention' SubClassOf 'effect on cis splicing' http://purl.obolibrary.org/obo/VariO_0477 regulatory RNA 'regulatory RNA' SubClassOf 'functional non-coding RNA' http://purl.obolibrary.org/obo/VariO_0476 catalytic RNA 'catalytic RNA' SubClassOf 'functional non-coding RNA' http://purl.obolibrary.org/obo/VariO_0479 small intervening RNA 'small intervening RNA' SubClassOf 'regulatory RNA' http://purl.obolibrary.org/obo/VariO_0478 microRNA 'microRNA' SubClassOf 'regulatory RNA' http://purl.obolibrary.org/obo/VariO_0482 X-chromosome inactivation center RNA 'X-chromosome inactivation center RNA' SubClassOf 'functional non-coding RNA' http://purl.obolibrary.org/obo/VariO_0481 signal recognition particle RNA 'signal recognition particle RNA' SubClassOf 'functional non-coding RNA' http://purl.obolibrary.org/obo/VariO_0484 DNA editing related RNA 'DNA editing related RNA' SubClassOf 'functional non-coding RNA' http://purl.obolibrary.org/obo/VariO_0483 RNA editing related RNA 'RNA editing related RNA' SubClassOf 'functional non-coding RNA' http://purl.obolibrary.org/obo/VariO_0486 location or origin of non-coding RNA 'location or origin of non-coding RNA' SubClassOf 'non-protein coding RNA' http://purl.obolibrary.org/obo/VariO_0485 spliceosomal RNA 'spliceosomal RNA' SubClassOf 'functional non-coding RNA' http://purl.obolibrary.org/obo/VariO_0488 mitochondrial non-coding RNA 'mitochondrial non-coding RNA' SubClassOf 'location or origin of non-coding RNA' http://purl.obolibrary.org/obo/VariO_0487 nuclear non-coding RNA 'nuclear non-coding RNA' SubClassOf 'location or origin of non-coding RNA' http://purl.obolibrary.org/obo/VariO_0489 chromatin related non-coding RNA 'chromatin related non-coding RNA' SubClassOf 'location or origin of non-coding RNA' http://purl.obolibrary.org/obo/VariO_0480 piwi-interacting RNA 'piwi-interacting RNA' SubClassOf 'regulatory RNA' http://purl.obolibrary.org/obo/VariO_0493 ribosomal RNA 'ribosomal RNA' SubClassOf 'translation related non-coding RNA' http://purl.obolibrary.org/obo/VariO_0492 short non-coding RNA 'short non-coding RNA' SubClassOf 'size of non-coding RNA' http://purl.obolibrary.org/obo/VariO_0495 very long non-coding RNA 'very long non-coding RNA' SubClassOf 'size of non-coding RNA' http://purl.obolibrary.org/obo/VariO_0494 long non-coding RNA 'long non-coding RNA' SubClassOf 'size of non-coding RNA' http://purl.obolibrary.org/obo/VariO_0497 alternatively terminated mRNA 'alternatively terminated mRNA' SubClassOf 'alternative form of mRNA' http://purl.obolibrary.org/obo/VariO_0496 exon 'exon' SubClassOf 'mRNA' http://purl.obolibrary.org/obo/VariO_0499 modified mRNA nucleotide 'modified mRNA nucleotide' SubClassOf 'alternative form of mRNA' http://purl.obolibrary.org/obo/VariO_0498 effect on RNA modification 'effect on RNA modification' SubClassOf 'effect on post transcriptional RNA modification' http://purl.obolibrary.org/obo/VariO_0491 size of non-coding RNA 'size of non-coding RNA' SubClassOf 'non-protein coding RNA' http://purl.obolibrary.org/obo/VariO_0490 centromeric non-coding RNA 'centromeric non-coding RNA' SubClassOf 'location or origin of non-coding RNA' http://purl.obolibrary.org/obo/VariO_0457 RNA virus genome 'RNA virus genome' SubClassOf 'RNA genome' http://purl.obolibrary.org/obo/VariO_0456 RNA genome 'RNA genome' SubClassOf 'protein coding RNA' http://purl.obolibrary.org/obo/VariO_0459 satelletite genome 'satelletite genome' SubClassOf 'RNA genome' http://purl.obolibrary.org/obo/VariO_0458 viroid genome 'viroid genome' SubClassOf 'RNA genome' http://purl.obolibrary.org/obo/VariO_0501 RNA fragment 'RNA fragment' SubClassOf 'location or origin of non-coding RNA' http://purl.obolibrary.org/obo/VariO_0500 effect on RNA pseudoknot 'effect on RNA pseudoknot' SubClassOf 'effect on RNA secondary structure' http://purl.obolibrary.org/obo/VariO_0503 loss of exon fragment 'loss of exon fragment' SubClassOf 'effect on cis splicing' http://purl.obolibrary.org/obo/VariO_0502 exon skipping 'exon skipping' SubClassOf 'effect on cis splicing' http://purl.obolibrary.org/obo/VariO_0505 inclusion of intron fragment 'inclusion of intron fragment' SubClassOf 'effect on cis splicing' http://purl.obolibrary.org/obo/VariO_0504 inclusion of cryptic exon 'inclusion of cryptic exon' SubClassOf 'effect on cis splicing' http://purl.obolibrary.org/obo/VariO_0510 effect on co-transcriptional splicing 'effect on co-transcriptional splicing' SubClassOf 'effect on mode of splicing' http://purl.obolibrary.org/obo/VariO_0512 effect on recursive splicing 'effect on recursive splicing' SubClassOf 'effect on mode of splicing' http://purl.obolibrary.org/obo/VariO_0511 effect on non-sequential splicing 'effect on non-sequential splicing' SubClassOf 'effect on mode of splicing' http://purl.obolibrary.org/obo/VariO_0513 mutually exclusive exon 'mutually exclusive exon' SubClassOf 'effect on cis splicing' http://purl.obolibrary.org/obo/VariO_0509 effect on mode of splicing 'effect on mode of splicing' SubClassOf 'effect on RNA splicing' http://purl.obolibrary.org/obo/VariO_0508 affected splice site 'affected splice site' SubClassOf 'effect on cis splicing' http://purl.obolibrary.org/obo/VariO_0341 RNA insertion editing 'RNA insertion editing' SubClassOf 'RNA modification by editing' http://purl.obolibrary.org/obo/VariO_0340 RNA substitution editing 'RNA substitution editing' SubClassOf 'RNA modification by editing' http://purl.obolibrary.org/obo/VariO_0342 RNA deletion editing 'RNA deletion editing' SubClassOf 'RNA modification by editing' http://purl.obolibrary.org/obo/VariO_0345 RNA degradation by nonstop decay 'RNA degradation by nonstop decay' SubClassOf 'RNA degradation by decay' http://purl.obolibrary.org/obo/VariO_0344 RNA degradation by decay 'RNA degradation by decay' SubClassOf 'effect on RNA degradation' http://purl.obolibrary.org/obo/VariO_0347 RNA degradation by nonsense-mediated decay 'RNA degradation by nonsense-mediated decay' SubClassOf 'RNA degradation by decay' http://purl.obolibrary.org/obo/VariO_0346 RNA degradation by no-go decay 'RNA degradation by no-go decay' SubClassOf 'RNA degradation by decay' http://purl.obolibrary.org/obo/VariO_0348 RNA modification by nonsense-associated altered splicing 'RNA modification by nonsense-associated altered splicing' SubClassOf 'variation affecting RNA structure' http://purl.obolibrary.org/obo/VariO_0355 RNA polyadenylation 'RNA polyadenylation' SubClassOf 'RNA modification by maturation' http://purl.obolibrary.org/obo/VariO_0358 RNA three prime end processing 'RNA three prime end processing' SubClassOf 'RNA modification by maturation' http://purl.obolibrary.org/obo/VariO_0357 RNA five prime capping 'RNA five prime capping' SubClassOf 'RNA modification by maturation' http://purl.obolibrary.org/obo/VariO_0359 RNA modification 'RNA modification' SubClassOf 'RNA modification by maturation' http://purl.obolibrary.org/obo/VariO_0360 RNA base modification 'RNA base modification' SubClassOf 'RNA modification' http://purl.obolibrary.org/obo/VariO_0339 RNA modification by editing 'RNA modification by editing' SubClassOf 'variation affecting RNA structure' http://purl.obolibrary.org/obo/VariO_0406 RNA degradation by Staufen-mediated decay 'RNA degradation by Staufen-mediated decay' SubClassOf 'RNA degradation by decay' http://purl.obolibrary.org/obo/VariO_0395 self-cleavage by ribozyme activity 'self-cleavage by ribozyme activity' SubClassOf 'variation affecting RNA structure'